LOCUS       DBBZXU010000001        82567 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.001, whole genome shotgun sequence.
ACCESSION   DBBZXU010000001 DBBZXU010000000
VERSION     DBBZXU010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 82567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 82567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..82567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.001"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(52..915)
                     /gene="rfbD"
                     /locus_tag="ACJJDE_000001"
     CDS             complement(52..915)
                     /gene="rfbD"
                     /locus_tag="ACJJDE_000001"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008831 - dTDP-4-dehydrorhamnose reductase
                     activity [Evidence IEA];
                     GO_process: GO:0009243 - O antigen biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HGG7540016.1"
                     /translation="MRILLTGSKSQLARCLRDRLPEDWETIATDSASLDITDADAVCN
                     MVKSFQPDAIVNTAAYTAVDKAEGNAAAAFAVNASAVYNLALAAHRAHARFIHISTDY
                     IFDGKGKRPYQESDFTNPSNVYGQSKTAGELLALSANPDSLILRTSWLFSEYGDNFVR
                     TMLNLARERSPLSAVHNQIGCPTYAGDLAAAIIRLLQQTSPVRGIYHYAGGKSVSWYE
                     FAQHIFQAASQQQTSFPVPELTAVSDKEYPTAAPRPAYSILDCRKIENDFGIKPSDWQ
                     KALAQVVSKLL"
     gene            1115..1978
                     /locus_tag="ACJJDE_000002"
     CDS             1115..1978
                     /locus_tag="ACJJDE_000002"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HGG7540017.1"
                     /translation="MSEIGLVKIYFGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPI
                     PSKGEILTQISNFWFKKLVHIMPNHFTGQTVYDVLPENEAKALEKRAVVAKKLTPVKV
                     EAIVRGYLAGSGWKDYQKTGSVCGIQLPEGMQEAQQLPEVIFTPSTKAAVGDHDENIS
                     FEECERIIGKELAAEVRAKAIQLYTEAAEYAKSRGIIICDTKFEFGLDTNGTLTLMDE
                     VLTPDSSRFWPADQYKVGTNPPSFDKQFVRDWLEQSGWNKKAPAPKVPADVIQKTVEK
                     YREALTLLTQD"
     gene            2215..4335
                     /gene="pnp"
                     /locus_tag="ACJJDE_000003"
     CDS             2215..4335
                     /gene="pnp"
                     /locus_tag="ACJJDE_000003"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HGG7540018.1"
                     /translation="MFDKHVKTFQYGNHTVTLETGEIARQAAAAVKVSMGDTVVLVAV
                     TTNKEVKEGQDFFPLTVDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPL
                     FPEGFYHDIQIVAMVVSVDPEIDSDIPAMLGASAALVLSGVPFAGPIGAARVGYVNGV
                     YVLNPTKAELAKSQLDLVVAGTSKAVLMVESEAKILPEDVMLGAVVYGHDQMQVAINA
                     INEFADEVNPELWDWKAPETNEELVAKVRGIAGETIKEAFKIRQKQARSAKLDEAWSA
                     VKEALITEETDTLAANEIKGIFKHLEADVVRSQILDGQPRIDGRDTRTVRPLNIQTGV
                     LPRTHGSALFTRGETQALAVATLGTSRDEQIIDALSGEYTDRFMLHYNFPPYSTGEVG
                     RMGAPKRREIGHGRLAKRALLAVLPKPEDFSYTMRVVSEITESNGSSSMASVCGGCLS
                     LLSAGVPLKAHVAGIAMGLILEGNKFAVLTDILGDEDHLGDMDFKVAGTTEGVTALQM
                     DIKIQGITKEIMQIALAQAKEARLHILDQMKAAVAGPQELSAHAPRLFTMKINQDKIR
                     EVIGKGGETIRAITAETGTEINIAEDGTITIAATTQEAGDAAKKRIEQITAEVEVGKV
                     YEGTVVKILDNNVGAIVSVMPGKDGLVHISQIAHERVRNVGDYLQVGQVVNVKALEVD
                     DRGRVRLSIKALLDAPAREENAAE"
     gene            complement(4408..5076)
                     /locus_tag="ACJJDE_000004"
     CDS             complement(4408..5076)
                     /locus_tag="ACJJDE_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7540019.1"
                     /translation="MNHDITFLTLFLLGFFGGTHCIGMCGGLSSAFALQLPPHINRFW
                     LILLLNTGRVSSYTAIGLILGLIGQVGVSLDQTRVLQNILYTAANLLLLFLGLYLSGI
                     SSLAAKIEKIGKPIWRNLNPILNRLLPIKSIPACLAVGILWGWLPCGLVYSASLYALG
                     SGSAATGGLYMLAFALGTLPNLLAIGIFSLQLKKIMQNRYIRLCTGLSVSLWALWKLA
                     VLWL"
     gene            complement(5090..5386)
                     /locus_tag="ACJJDE_000005"
     CDS             complement(5090..5386)
                     /locus_tag="ACJJDE_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540020.1"
                     /translation="MFRILLLLFPCAILAACARNIPASPAVSNCAHLQNRTILYFDAH
                     GKPADGAVKGGFYKIIEIQGANCILIQDFNSTGNALGGSYVPDCRKSSLFPKNI"
     gene            5523..6374
                     /gene="dapF"
                     /locus_tag="ACJJDE_000006"
     CDS             5523..6374
                     /gene="dapF"
                     /locus_tag="ACJJDE_000006"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HGG7540021.1"
                     /translation="MNTLKFTKMHGLGNDFMVIDAVSQDFTPEDAPIAAWADRFRGVG
                     FDQLLVVGRSETEGVDFRYRIFNADGSEVEQCGNGARCFARFVADKGLTDKKEICVET
                     ANGVIFPKLSDNGMVTVNMGKPRFMPSEIPFVPESGEGDDACIYGVHLESGIQPVSCV
                     NMGNPHAVIVVDDVECAPVRETGSLIEPHRQFPERVNVGFMQIVSRTAIRLRVFERGV
                     GETQACGTGACAAVVAGIRLGLLDEGKTVEVILPGGTLYIEWACGGDVMMTGPAEAVF
                     EGELAYS"
     gene            6371..6976
                     /locus_tag="ACJJDE_000007"
     CDS             6371..6976
                     /locus_tag="ACJJDE_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540022.1"
                     /translation="MILLHLDFLSALLYAAVFLFLIFRAGMLQWFWASIMLWLGISVL
                     GAKLMPGIWGMTRAAPLFIPHFYLTLGSIFFFIGHWNRKTDGNGWQADPEHPLLGLFA
                     VSNVSMTLAFVGICALVHYCFSGTVQVFVFAALLKLYALKPVYWFVLQFVLMAVAYVH
                     RCGIDRQPPSTFGGSQLRLGGLTAALMQVSVLVLLLSEIGR"
     gene            7170..8102
                     /gene="cysK"
                     /locus_tag="ACJJDE_000008"
     CDS             7170..8102
                     /gene="cysK"
                     /locus_tag="ACJJDE_000008"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004124 - cysteine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HGG7540023.1"
                     /translation="MKIANSITELIGNTPLVKLNRLTEGLKAEVAVKLEFFNPGSSVK
                     DRIAEAMIEGAEKAGKINKNTVIVEATSGNTGVGLAMVCAARGYKLAITMPESMSKER
                     KMLLRAFGAELILTPAAEGMAGAIAKAKSLVDAHPDTYFMPRQFDNEANPEVHRKTTA
                     EEIWRDTDGKVDVFVAGVGTGGTITGVGEVLKKYKPEVKVVAVEPEASPVLSGGEKGP
                     HPIQGIGAGFIPTVLNTKIYDSITKVPNEAAFETARAIAEKEGILVGISSGAAVWSAL
                     QLAKQPENEGKLIVVLLPSYGERYLSTPLFADLA"
     gene            8264..8397
                     /locus_tag="ACJJDE_000009"
                     /pseudo
     CDS             8264..8397
                     /locus_tag="ACJJDE_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            8668..9573
                     /locus_tag="ACJJDE_000010"
     CDS             8668..9573
                     /locus_tag="ACJJDE_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7540024.1"
                     /translation="MGKGGDIVVGNGKKYAAPLLVLGCVVFGLGSLIVRSVPVGSYAI
                     AFWRLLISVFVFWFLARFFRQKFPKNRKTVRYALTAGVFLAFDLALWHESIHAVGPGI
                     STLLNSLQIFFLSAIGVFFFGERLSGLKKAGLISAVAGVAMIAGAEFGYNGNAVWGFV
                     SGLVSGLMLALSMVFVRKTHEIETVALFPSMMILSLGGAVSLVVPALLMDGGALYPTT
                     WKDAGLVLVYGVVMQCFAWAMVAYAIPLLSLSLTGLLLLSEPVAALFIDYFGLGKPIE
                     GVQWAGVALTLSAIYLGSLKQQSEP"
     gene            9619..9768
                     /locus_tag="ACJJDE_000011"
     CDS             9619..9768
                     /locus_tag="ACJJDE_000011"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540025.1"
                     /translation="MNWQAVKTGKTKHASNGAERKMPSEALSDGIGAGRIKKAASAGM
                     AMQLK"
     gene            complement(9987..11006)
                     /gene="lepB"
                     /locus_tag="ACJJDE_000012"
     CDS             complement(9987..11006)
                     /gene="lepB"
                     /locus_tag="ACJJDE_000012"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HGG7540026.1"
                     /translation="MNTMLMSGAAAALLAGIILYFKSDKKRQENGEWSSGLEYAYILT
                     AVGVFAALSLFMSFTAVFLIFVVLCGTAWGVYKYRLKTHPEISESSHFGDYFGSFFPT
                     VLVLFLIRSFIAEPFQIPSSSMRPGLIKGDFILVGKFSYGLRVPVLNNIFIPTGKIER
                     GDVVVFNYPLQPEMTYIKRIVGIPGDVVEYRNKVLTVNGKPASDIPDGTYRYPDDTDP
                     SEIHNTDMFHSGLDGKSFNILKKEGQPAVSLPVLGKYTSDIMSENGYSIEQSGLEHCQ
                     YADDGSGFVCKVPEGRYFAMGDNRDNSADSRYWGFVDDKLVVGKAMFILMNFGDFGRA
                     GTAIR"
     gene            complement(11149..12942)
                     /gene="lepA"
                     /locus_tag="ACJJDE_000013"
     CDS             complement(11149..12942)
                     /gene="lepA"
                     /locus_tag="ACJJDE_000013"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HGG7540027.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLADRFIQYCGGLDLREMSTQVLDSM
                     DIEKERGITIKAQTAALNYKARDGQVYQLNLIDTPGHVDFSYEVSRSLSACEGALLVV
                     DASQGVEAQTVANCYTAIDLGVEVVPVLNKIDLPAADPERVEQEIEDIIGIDAVGAVQ
                     CSAKSGIGVEDVLEEIVAKIPAPTGDENAPLQAVIVDSWFDNYVGVVMLIRVKNGTIK
                     LKDKVRFMSTKAETQVEQLGVFTPKSVQKQELKAGEVGFLITGVKELGQAKVGDTVTL
                     VANPATEPLPGFQEVQSQVFAGLYPVESHDYEALRDALEKLQLNDASLKFEPEVSQAL
                     GFGFRCGFLGLLHLEIVQERLEREFDMDLITTAPTVVYEVVLKSGEKIEVENPSKLPD
                     IGSIETILEPIITATILVPQEYVGNVMTLCNQKRGVQVNMQYMGRQVMLTYDLPMNEV
                     VMDFFDKLKSTSRGYASLDYHFKEFQPSDLIKLDIMVNGEKVDALSLIVHRQSAVHRG
                     RELASKMRELIPRQMFDIAVQAAIGSQIIARENVKALRKNVLAKCYGGDITRKKKLLE
                     KQKAGKRRMKQVGNVEIPQSAFLAILQVSDK"
     gene            complement(13085..13786)
                     /locus_tag="ACJJDE_000014"
     CDS             complement(13085..13786)
                     /locus_tag="ACJJDE_000014"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008782 - adenosylhomocysteine
                     nucleosidase activity [Evidence IEA];
                     GO_function: GO:0008930 - methylthioadenosine nucleosidase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009164 - nucleoside catabolic process
                     [Evidence IEA];
                     GO_process: GO:0019509 - L-methionine salvage from
                     methylthioadenosine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HGG7540028.1"
                     /translation="MSLKTVAVIGAMEQEIELLREMMENVKAVSFGKFAAYEGELAGK
                     RMVLALSGIGKVNAAVATAWLIHQFAPDCVINTGSAGGLGKGLKVGDVVVGTEIAHHD
                     VDVTAFGYVWGQVPQLPAVFVSDGLLVGKAKQAAEVFEGAAVEQGLIVSGDRFVHSSE
                     GVAEIRKHFPKVKAVEMEAAAIAQTCHQLETPFVIIRAVSDSADEKADISFDEFLKTA
                     AASSAKMVAEIVKSL"
     gene            13954..15084
                     /locus_tag="ACJJDE_000015"
     CDS             13954..15084
                     /locus_tag="ACJJDE_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7540029.1"
                     /translation="MFTDENMTAKEELFAWLRHMNKNKGSDLFVTTHFPPAMKLDGKI
                     TRITDEPLTAEKCMEIAFSIMSAKQAEEFSSTNECNFAISLPDTSRFRVNAMIQRGAT
                     ALVFRAITSKIPKFESLNLPPVLKDVALKKRGLVIFVGGTGSGKSTSLASLIDYRNEN
                     SFGHIITIEDPIEFVHEHKNCIITQREVGVDTENWMAALKNTLRQAPDVILIGEIRDR
                     ETMDYAIAFAETGHLCMATLHANSTNQALDRIINFFPEERREQLLTDLSLNLQAFISQ
                     RLVPRDGGKGRVAAVEVLLNSPLISELIHNGNIHEIKEVMKKSTTLGMQTFDQHLYQL
                     YEKGDISLQEALKNADSAHDLRLAVQLRSRRAQSSSPDLELL"
     gene            15118..16095
                     /locus_tag="ACJJDE_000016"
     CDS             15118..16095
                     /locus_tag="ACJJDE_000016"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HGG7540030.1"
                     /translation="MIYPWHNEQWRQIAEHWERRPNAWLFAGKKDTGKTTFARFAAKA
                     LLCETPAPGCKPCGECMSCHLFGQGSHPDFYEITPLSDEPENGRKLLQIKIDAVREII
                     DNVYLTSVRGGLRVILIHPAESMNVQAANSLLKVLEEPPPQVVFLLVSHAADKVLPTI
                     KSRCRKMVLPAPSHGEALAYLRDRGVAEPEEFLAFHSGAPLFDEADGVRALRIKLLDI
                     LAEPRLLKILDYAALFDKEKLPLAVFVGWMQKWLVDLGLCLQHMKPVYYPAYEDRLLQ
                     TVSGFRPRNVFAAEDMLKQLAPYGFHTLNVKMQIEHLLINYLELKKENG"
     gene            16099..16449
                     /locus_tag="ACJJDE_000017"
     CDS             16099..16449
                     /locus_tag="ACJJDE_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HGG7540031.1"
                     /translation="MSDGQNIPAKMMSLQLKDMNLLYSSYMPFLEHGGLFVQTNDVFS
                     IGDDILLAVEILNFPKLFLPTKVAWINPARTSSKPKGVGLAFTKHENCLKVKDQIEVE
                     LGNTIGGSRPTFTM"
     gene            16454..17233
                     /locus_tag="ACJJDE_000018"
     CDS             16454..17233
                     /locus_tag="ACJJDE_000018"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7540032.1"
                     /translation="MHIIDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESF
                     SEVFAIAEAHEHIYCTIGVHPDSKEAEEFSIAEMVAAAASPKVVGIGETGLDYYWCKG
                     DLSWQHKRFADHIEAANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFA
                     RAAMDLGLYISFSGIVTFKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPA
                     FVRHTAEHIAKLRNQTLEQVAAYTTENFYRLFKKVPDMRPV"
     gene            17282..17488
                     /locus_tag="ACJJDE_000019"
     CDS             17282..17488
                     /locus_tag="ACJJDE_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HGG7540033.1"
                     /translation="MSALLPAACQHVSDRHEAVGMVKSASKFCIAKGGGWEAKKDESG
                     GGYALCHLPDSRIVEEWEYFRSQH"
     gene            17589..17900
                     /gene="grxD"
                     /locus_tag="ACJJDE_000020"
     CDS             17589..17900
                     /gene="grxD"
                     /locus_tag="ACJJDE_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HGG7540034.1"
                     /translation="MASIHDQIKEVVTTHRVVLFMKGTKQFPQCGFSSRAVQILNAAG
                     CTDYVTVNVLENPEVRQGIKEYSDWPTIPQLYVNGEFVGGSDILAEMYEAGELQDLLK
                     A"
     gene            18006..18632
                     /gene="upp"
                     /locus_tag="ACJJDE_000021"
     CDS             18006..18632
                     /gene="upp"
                     /locus_tag="ACJJDE_000021"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006223 - uracil salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HGG7540035.1"
                     /translation="MNVNVINHPLVRHKLTLMREADCSTYKFRTLAIELARLMAYEAS
                     RDFEIEKYLIDGWCGQIEGDRIKGKTLTVVPILRAGLGMLDGVLDLIPTAKISVVGLQ
                     RDEETLKPVSYFEKFVDSMDERPALIIDPMLATGGSMVATIDLLKEKGCRNIKALVLV
                     AAPEGVKAVNDAHPDVTIYTAALDSHLNENGYIIPGLGDAGDKIFGTR"
     gene            18655..18975
                     /locus_tag="ACJJDE_000022"
     CDS             18655..18975
                     /locus_tag="ACJJDE_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2322 family protein"
                     /protein_id="HGG7540036.1"
                     /translation="MNFQDYLATFPSIDHLGGLDVQDADGKTVHHIPAVQGKLGSLKL
                     YNALAERFDGKLDKEAAEQGLIWFAEHVADARAHPGKHPNIDLLEKVVQSGETLLLKP
                     LAAQ"
     gene            19379..19801
                     /locus_tag="ACJJDE_000023"
     CDS             19379..19801
                     /locus_tag="ACJJDE_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein Gly1ORF1"
                     /protein_id="HGG7540037.1"
                     /translation="MKKMFLSAVLLLSAATRTVWADTVFSCKTDNNKYIEVQKINRNL
                     YEYSFGSAAKKEIAIRNSKADLSGRSDRWQGMGSGRRATMKFQNGEFMYTVWTGFDSV
                     THTESSGVVVERKGKEVARVGCTPQTAQANFNDADFSR"
     gene            19819..20580
                     /locus_tag="ACJJDE_000024"
     CDS             19819..20580
                     /locus_tag="ACJJDE_000024"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004852 - uroporphyrinogen-III synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006780 - uroporphyrinogen III biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HGG7540038.1"
                     /translation="METVNPIMLIVRPSGRAKDDVETCRRAGWQAEVLSPIEIEADAA
                     GLELLSEQYARADAVFWVSPTAVETAVPYLNLSDGIKMHISVGQGSRRALERCLVRTV
                     IAPDDGNDSEAVLRLPVWNSLPEGARVLFVRGHGGRDFLMNALQEKGFRTEVAEVYFR
                     RHKPLNFQNFQTENIAAAYITSTELVRLLFGQLPPQFSRFFKSLLYFTHHPRIAEALK
                     REGVCSVETVPTLEAALSHSSISVSDGMVFPGTSN"
     gene            20595..21929
                     /locus_tag="ACJJDE_000025"
     CDS             20595..21929
                     /locus_tag="ACJJDE_000025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HGG7540039.1"
                     /translation="MGEPENKSSEPVREIQASKEMPSETSSPRKENETEVHIPAAPFI
                     VKQSGSNALAVCALVLAALGLGTSGFLFVQGQNVLKNQELAFNQKIDKAALGESENAA
                     LLKDNLNRQAAIQSELDRLDGNVKANGEQILEMQKSYRELTKGRADWLVDETETILNL
                     AAQQLVLTGNIQTAVGVLEHIDSRLSRFNQAELLPIKQAVSSDLAELKNRPYVDISGT
                     ALRLDRLEIAVSGLPLILDGVLKPSVQARNEAVSASWWQNVWEKSLGTLKGLVEIRRL
                     ENNDAMLISPEQAYFVRENLRLRLLDARTALMQRNSEVYQGDLNNAETAVRQYFDAKS
                     PATQSWLKELAELKALDVRMTADDGLKNSLNAVRAYRDGTRMTTAENQEAEQATSEPA
                     NENTASEPAAASDVKTIEAPSLPSERKPEQPAKKQPVPEKAGRSPSAKGERA"
     gene            21926..23143
                     /locus_tag="ACJJDE_000026"
     CDS             21926..23143
                     /locus_tag="ACJJDE_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis protein HemY"
                     /protein_id="HGG7540040.1"
                     /translation="MKTVVWIVVLFAAAVGLALASGIYTGDVYIVLGQTMLRINLHAF
                     VLGSLIAVVVWYFLFKFIIGVFNIPEKMQRFGSARKGRKAALALNKAGLAYFEGRFEK
                     AELEASRVLVNKEAGDNRTLALMLGAHAAGQMENIELRDRYLAEIAKLPEKQQLSRYL
                     LLAESALNRRDYEAAEANLHAAAKMNANLTRLVRLQLRYAFDRGDALQVLAKTEKLSK
                     AGALGKSEMERYQNWAYRRQLADAADAAALKTCLKRIPDSLKNGELSVSVAEKYERLG
                     LYADAVKWVKQHYPHNRRPELLEAFVESVRFLGERDQQKAIDFADAWLKEQPDNALLL
                     MYLGRLAYGRKLWGKAKGYLEASIALKPSISARLVLAKVFDETGEPQKAEAQRNLVLA
                     SVAEENRPSAETC"
     gene            23218..24282
                     /gene="hemE"
                     /locus_tag="ACJJDE_000027"
     CDS             23218..24282
                     /gene="hemE"
                     /locus_tag="ACJJDE_000027"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HGG7540041.1"
                     /translation="MTLLKNDTFLRALLKQPVEYTPIWMMRQAGRYLPEYKATRAKAG
                     SFLDLCKNTELATEVTIQPLERFDLDAAILFSDILTVPDAMGLGLYFAEGEGPKFKRA
                     LQHEDDIAKLHVPDMEKLQYVFDAVSSIRKALDGRVPLIGFSGSPFTLACYMVEGGSS
                     KEFRTIKTMMYSRPDLLHKILDTNAQAVTAYLNAQIDAGAQAVQIFDTWGGVLSDEAF
                     KEFSLKYIRQIVAGLKRESEGRRVPVIVFAKGGGLWLESMAEIGADALGLDWTCNIGE
                     ARRRVGKQVALQGNFDPFALFGTPESIRTEVARILADYGQGSGHVFNLGHGINQHADP
                     EHAKILVDTVHELSRQYHGG"
     gene            24471..25850
                     /gene="radA"
                     /locus_tag="ACJJDE_000028"
     CDS             24471..25850
                     /gene="radA"
                     /locus_tag="ACJJDE_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HGG7540042.1"
                     /translation="MAKTLKTLYQCTECGGTSPKWQGKCPHCGEWNTLQESLAAPEPK
                     NARFQSWAADTSTVQSLSSVTATEVPRNPTGMGELDRVLGGGLVDGAVILLGGDPGIG
                     KSTLLLQTIAKMAQSRKVLYVSGEESAQQVALRAQRLELPTEGVNLLAEIRMEAIQAA
                     LKQHQPEVVVIDSIQTMYSDQITSAPGSVSQVRECAAQLTRMAKQMGIAMILVGHVTK
                     DGAIAGPRVLEHMVDTVLYFEGDQHSNYRMIRAIKNRFGAANELGVFAMTENGLKGVS
                     NPSAIFLASYRDDTPGSCVLVTQEGSRPLLVEIQALVDDAHGFTPKRLTVGLEQNRLA
                     MLLAVLNRHGGIACFDQDVFLNAVGGVKIGEPAADLAVILAMLSSFRNRPLPEKMVAF
                     GEIGLSGEVRPVARGQERLKEAEKLGFKRAIVPKANMPRNAKEFPNLKIYGVSSLQEA
                     IDICREDRD"
     gene            complement(25921..26400)
                     /locus_tag="ACJJDE_000029"
     CDS             complement(25921..26400)
                     /locus_tag="ACJJDE_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF302 domain-containing protein"
                     /protein_id="HGG7540043.1"
                     /translation="MKHILPLIAASALCISTASAHPAGKPPTQNETAMTTHTLTSKYS
                     FDETVSRLETAIKSKGMNIFAVIDHQEAARRNGLTMQPAKVIVFGTPKAGTPLMVKDP
                     AFALQLPLRVLVTETDGKVRAAYTDTRALIAGSRIGFDEVANTLANAEKLIQKTVGE"
     gene            complement(26642..27001)
                     /locus_tag="ACJJDE_000030"
     CDS             complement(26642..27001)
                     /locus_tag="ACJJDE_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7540044.1"
                     /translation="MNIKHLITAALIASAAFAAQAAPQKPVSAAQTAQHPAVWIDVRS
                     EQEFSEGHLHNAVNIPVDQIVRRIHEAAPDKDTPVNLYCRSGRRAEAALQELKKAGYT
                     NVANHGGYEDLLKKGMK"
     gene            complement(27040..30654)
                     /gene="recB"
                     /locus_tag="ACJJDE_000031"
     CDS             complement(27040..30654)
                     /gene="recB"
                     /locus_tag="ACJJDE_000031"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HGG7540045.1"
                     /translation="MSAPIQAFDPLTVPIAGTNLIEASAGTGKTYGIAALFTRLIVLE
                     QKNVERVLVVTFTKAATAELKTRLRARLDDVLQVLESKEIAKLGDDTLSDGIAAYCAE
                     HHKGDTFLPALLKQALQKEGRTRLIVRLKAAIGQFDNAAIYTIHGFCQRILRDYAFLC
                     QAPFDVELTEEDGDRLLIPAQDFWRERVSNDPVLAALAFKRKAVPQTVLAQISRYLSR
                     PYLNFRRPQADLKQAQRNAETSWQTICRLLPELEAGFWRIHPDLNGNSYRKNSFGNLF
                     KELAQKSAAGQLPFLDKDTHDRLLKLASDKLEAALKKGKTPDAAAFAELQKLADFGRD
                     LNALEEAEEATMIRLQLDLIGYLNRSLAEMKKSRRERGFDDLLLDVHTALTDNPHAET
                     LARAVAENWETALIDEFQDTDPLQYEIFQKIFIAQNRPLFLVGDPKQAIYSFRGADIY
                     AYLQAAGDARHRYTLATNYRSHAALIGSIGALFRLKERPFVLENIGYSEVGAARAESR
                     LSPERPAVQVRWLHENDNEKANKDVLRRRAADYCADEIAHALNEAAGGRLNFKGCPLQ
                     SGDIAVLVRTHNEAVMVSAALKKRQVQSVLLSRESVFASPEAAALSALIGFWLEPRRA
                     GTLRFVLTSGIFGYDAQQLHDFNQNESEILHWAESARTALDNWNQYGIFAAMQQFSQT
                     HGIETRLLSRNNGRSLTNYFQLLELLAAEDAQNRNPAALHKWLRDQISLAGNNSGDNR
                     AIRLESDEDLVKIVTMHASKGLQYPLVYCPFAWDAQDTGPSDWQILHQSANRTELLAK
                     AQLSEDEQKQYADEEMAERLRLLYVALTRAEEQLNIYAAYSTNTADNPLAYLIEGSPQ
                     DSRETVRRAYACEKDGIAMLKRNWRRVADNAPSGTNFAFTENAPPPAAYRSNAGQTAE
                     FAANSIPERGFRFVRHTSFTALSRHTQTPDGGEEDACPSLDAAETSVPAMPSETPTAS
                     DGISIHDFPKGTQAGLCLHEILEDFKFGQAAAGQETLIADKLKKYGFEEIWLPAVAEM
                     AEACRKTPLTGAYDLSDISPECRCPEMGFTLHTEDFSLKRLRDWFARDDIRLPEVCRA
                     AAETLDFHTVNGFLNGFVDMVCQDPDGNICVIDYKSNHLGTDASAYTQQAMDEAVAHH
                     HYYLQALIYAVAAARYFKLRGQPPAAVSVRYLFLRGLDGKGGGVWRWDIDAAALEQIK
                     "
     gene            complement(30734..31642)
                     /locus_tag="ACJJDE_000032"
     CDS             complement(30734..31642)
                     /locus_tag="ACJJDE_000032"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Dyp-type peroxidase"
                     /protein_id="HGG7540046.1"
                     /translation="MNTPQSAIIPDHAQAGIFIEADFAANRLNDIKAACRASLDALTA
                     LKARFPDDILGLTIAFGSKAWATFGHTDEGSEIKPFSEMGNGLAPSTQHDMSIHIQSF
                     RQNAAYALAQSVLGAFGDSICVASEEHGLRLYQDRGLDGFVDGTENPQGDENVREVAI
                     IPEGKPDAGGSYVLLQKYLHDLKKWDAVPVAEQEASVGRGKETDDEFGRDVRLPDSHL
                     GRVNLKENGVGLKIVRRSLPFGKISGEHGLMFTAYCRTLHNIEAQLLSMFGDTDGKTD
                     LLLRHLSAAVSGGYYYAPSVERLQNL"
     gene            31927..32754
                     /locus_tag="ACJJDE_000033"
     CDS             31927..32754
                     /locus_tag="ACJJDE_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7540047.1"
                     /translation="MMLKKFVLGGIAALVLAACGGSEGGSGASSAPAQSAVSGSLIER
                     INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLGVKVEFKETQWDSMMA
                     GLKAGRFDVVANQVGLTSPERQATFDKSDPYSWSGAVLVARNDSNIKSIDDIKGVKTA
                     QSLTSNYGEKAKAAGADLVAVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGV
                     KIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDISVQ"
     gene            32744..33460
                     /locus_tag="ACJJDE_000034"
     CDS             32744..33460
                     /locus_tag="ACJJDE_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7540048.1"
                     /translation="MFNNFLASLPFMTETRADMIVSAFLPMVKAGFAVSLPLAAASFV
                     IGMVIAVAVALVRIMPAGGIARKILLKLVEFYISVIRGTPLLVQLVIVFYGLPSVGIY
                     IDPIPAAIIGFSLNVGAYASETIRAAILSVPKGQWEAGFSIGMTYMQTFRRIVAPQAF
                     RVAVPPLSNEFIGLFKNTSLAAVVTVTELFRVAQETANRTYDFLPVYIEAALVYWCFC
                     KVLFLIQARLEKRFDRYVAK"
     gene            33470..34225
                     /locus_tag="ACJJDE_000035"
     CDS             33470..34225
                     /locus_tag="ACJJDE_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7540049.1"
                     /translation="MIKIRNIHKTFGENTILRGIDLDVGKGQVVVILGPSGSGKTTFL
                     RCLNALEMPEDGQIEFDNERPLKIDFSKKPSKHDILALRRKSGMVFQQYNLFPHKTAL
                     ENVMEGPVAVQGKPAAQAREEALKLLEKVGLGDKVDLYPYQLSGGQQQRVGIARALAI
                     QPELMLFDEPTSALDPELVQDVLNAMKELAREGWTMVVVTHEIKFALEVATTVVVMDG
                     GVIVEQGSPKELFDHPKHERTRRFLSQIQSTKI"
     gene            complement(34245..35627)
                     /locus_tag="ACJJDE_000036"
     CDS             complement(34245..35627)
                     /locus_tag="ACJJDE_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HGG7540050.1"
                     /translation="MANIARDIFKAYDIRGIVGKTLTDDAAYLIGRAIAAKAAEKGMT
                     RIALGRDGRLSGPELMEHIQRGFTDSGIDVLNVGMVATPMLYFAAINECGGSGVMITG
                     SHNPPDYNGFKMMLGGDTLAGEAIQELLAIIEKDGFVAADKQGNVTEKDISGEYHNHI
                     VGHIKLKRPMNIAIDAGNGVGGAFAGKLYKGLGNEVTELFCDVDGNFPNHHPDPSKPK
                     NLQDLIAALKNGDAEIGLAFDGDADRLGVVTKDGNIIYPDRQLMLFAQDVLSRNPKAK
                     VIFDVKSTRLLAPWIKEHGGEPVMEKTGHSFIKSSMKKTGAPVAGEMSGHIFFKERWF
                     GFDDGLYAGARLLEILSASDNPSEVLNNLPQSISTPELNIALPEGSNGHQVIDELAAK
                     AEFEGATEIITIDGLRVEFPDGFGLMRASNTTPILVLRFEADTQEAIERIQNQFKAVI
                     ESNPNLIWPL"
     gene            complement(35790..36299)
                     /locus_tag="ACJJDE_000037"
     CDS             complement(35790..36299)
                     /locus_tag="ACJJDE_000037"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7540051.1"
                     /translation="MIILHTNKGDIKIELDFDKAPVTAKNFEQYVKDGFYDGVIFHRV
                     IKGFMIQGGGMDENMNEKETRDPIQNEASNGLPNDKYTIAMARTSDPHSASAQFFINT
                     ADNAFLNFRSKELYGKTVVQDWGYAVFGKVVDGFDVVDAIEGVSTKRHGYHDDVPSEP
                     VVIIKAEAV"
     gene            complement(36418..37833)
                     /locus_tag="ACJJDE_000038"
     CDS             complement(36418..37833)
                     /locus_tag="ACJJDE_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HGG7540052.1"
                     /translation="MNLHAKDKTQHPENVELLSAQKPITDFKGLLTTIISAVVCFGIY
                     HILPYSPDANKGIALLIFVAALWFTEAVHITVTALMVPILAVVLGFPDMDIKKAMADF
                     SNPIIYIFFGGFALATALHMQRLDRKIAVSLLRLSRGNMKVAVLMLFLVTAFLSMWIS
                     NTATAAMMLPLAMGMLSHLDQEKEHKTYVFLLLGIAYCASIGGLGTLVGSPPNLIAAK
                     ALNLDFVGWMKLGLPMMLLILPLMLLSLYVILKPNLNERVEIKAESIPWTLHRVIALL
                     IFLATAAAWIFSSKIKTAFGISNPDTVIALSAAVAVVVFGVAQWKEVARNTDWGVLML
                     FGGGISLSTLLKTSGASEALGQQVAATFSGAPAFLVILIVAAFIIFLTEFTSNTASAA
                     LLVPIFSGIAMQMGLPEQVLVFVIGIGASCAFMLPVATPPNAIVFGTGLIKQREMMNV
                     GILLNILCVVLVALWAYAVLM"
     gene            complement(38064..38426)
                     /locus_tag="ACJJDE_000039"
     CDS             complement(38064..38426)
                     /locus_tag="ACJJDE_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HGG7540053.1"
                     /translation="MKLPRNRFSLLSALWFAGGIYSLLFKAADTAPPPFPHFDKAAHL
                     ALFFAQIWLLTKAFKTGKLPIPYRSLMVFALCFALFSECAQAWFTATRTGSLGDVLAD
                     MAGTVLALFAARAADRPD"
     gene            complement(38423..38629)
                     /locus_tag="ACJJDE_000040"
     CDS             complement(38423..38629)
                     /locus_tag="ACJJDE_000040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HGG7540054.1"
                     /translation="MTELKQLIQTESIPVIEETLDFLLYECSIDDAPSAEEVAQWRDI
                     LAARGGKFLRLSKICQTWLDEEAA"
     gene            complement(38690..39268)
                     /gene="pth"
                     /locus_tag="ACJJDE_000041"
     CDS             complement(38690..39268)
                     /gene="pth"
                     /locus_tag="ACJJDE_000041"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HGG7540055.1"
                     /translation="MSNKIKMLVGLGNPGKEYEQTRHNAGFWFLDELAWKWKASFKEE
                     KKFFGEVARAALPDGDVWLLKPATFMNRSGQAVAALAQFYKIKPEEILVVHDELDIPC
                     GRIKFKLGGGNGGHNGLKDIQAKLGTADYYRLRLGIDHPGDRNLVVGYVLNKPSTEHR
                     RQIDDAVAKSLQAIPDILAGKWEEATRFLHSK"
     gene            complement(39321..39599)
                     /locus_tag="ACJJDE_000042"
     CDS             complement(39321..39599)
                     /locus_tag="ACJJDE_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HGG7540056.1"
                     /translation="MLEIEIVYGLPDRQVLKTMQLAEGTTVRAAALQSGLDGIFEDLN
                     LHSAPLGIFGKAVKDDTPLRDGDRIEVYRPLLIDPKEARRKRVQNQEE"
     gene            complement(39592..40023)
                     /locus_tag="ACJJDE_000043"
     CDS             complement(39592..40023)
                     /locus_tag="ACJJDE_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RatA family
                     toxin"
                     /protein_id="HGG7540057.1"
                     /translation="MKKVEKNILVLHGADKMFELVDKVEDYPHFLPWYSKTEVIGRSG
                     NELKARLFMDYMHVRQSFATHNRNIPGREIRMELLEGPFKTLRGTWKFIDLGDDMCKI
                     EFNLEYDFSNAVLSALISPVFNHLSATLVEAFVKEADRRYA"
     gene            complement(40245..42212)
                     /gene="ftsH"
                     /locus_tag="ACJJDE_000044"
     CDS             complement(40245..42212)
                     /gene="ftsH"
                     /locus_tag="ACJJDE_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HGG7540058.1"
                     /translation="MGNTFKSILVWVALGIGLMAAFNALDGKKEDNGQIEYSQFIQQV
                     NNGEVSGVNIEGSVVSGYLIKGERTDKSTFFTNAPLDDNLIKTLLDKNVRVKVTPEEK
                     PSALAALFYSLLPVLLLIGAWFYFMRMQTGGGGKGGAFSFGKSRARLLDKDANKVTFA
                     DVAGCDEAKEEVQEIVDYLKAPNRYQSLGGRVPRGILLAGSPGTGKTLLAKAIAGEAG
                     VPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRQRGAGLGGGN
                     DEREQTLNQLLVEMDGFESNQTVIVIAATNRPDVLDPALQRPGRFDRQVVVPLPDIRG
                     REQILNVHSKKVPLDESVDLLSLARGTPGFSGADLANLVNEAALFAGRRNKVKVDQSD
                     FEDAKDKIYMGPERRSMVMHEDEKRATAYHESGHAIVAESLPFTDPVHKVTIMPRGRA
                     LGLTWQLPERDRISMYKDQMLSQLSILFGGRIAEDIFVGRISTGASNDFERATQMARE
                     MVTRYGMSDKMGVMVYAENEGEVFLGRSVTRSQNISEKTQQDIDAEIRRILDEQYQIA
                     YKILDENRDKMETMCKALMEWETIDRDQVLEIMAGKQPSPPKDYSHNLRENADAAEDN
                     APHAPTREETEAPAPADTASTESEQQPENKA"
     gene            complement(42276..42896)
                     /locus_tag="ACJJDE_000045"
     CDS             complement(42276..42896)
                     /locus_tag="ACJJDE_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HGG7540059.1"
                     /translation="MAVRSKSSKAWLHEHVNDHYVHMAQKDGYRARAAYKLLEINEKD
                     KLIKPGTVLADLGSAPGSWSQVAAKLTGTSGAVFALDILPMEAIGGVSFIQGDFREND
                     VLAQFETLLDNRPLDLVICDMAPNMSGNAVSDQARSFYLCELALDFASQHLKTGGSFL
                     VKVFQGAGYQEYMAAMREIFGTVQTRKPEASRNRSSEIYLLGKNKR"
     gene            43006..43290
                     /gene="yhbY"
                     /locus_tag="ACJJDE_000046"
     CDS             43006..43290
                     /gene="yhbY"
                     /locus_tag="ACJJDE_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HGG7540060.1"
                     /translation="MTDTKLNTKEILELKARAHHLHPVVMVGQQGLTDAVIKETDAAL
                     TAHELIKVRVFGDDRAERIEICTALCEAVDAQPVQHIGKLLVLWRKNIEG"
     gene            43473..44474
                     /gene="hemB"
                     /locus_tag="ACJJDE_000047"
     CDS             43473..44474
                     /gene="hemB"
                     /locus_tag="ACJJDE_000047"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HGG7540061.1"
                     /translation="MQFPYRNVPASRMRRMRRDDFSRRLMREHTLTADDLIYPVFVLE
                     GSAREEDVPSMQGVKRQSLDRLLFTAEEAVKLGIPMLALFPVVTANKTERAQEAYNPE
                     GLVPSTVRALRERFPELGIMTDVALDPYTVHGQDGLTDENGYVMNDETVEVLVKQALC
                     HAEAGAQVVAPSDMMDGRIGAIREALEDAGHIHTLIMAYSAKYASAFYGPFRDAVGSS
                     GNLGKADKKTYQMDPANTDEALHEVALDIQEGADMVMVKPGLPYLDVVRRVKDEFGVP
                     TYAYQVSGEYAMLQAAVANGWLDGDKVVLESLLAFKRAGADGILTYYAIEAAKMLKR"
     gene            complement(44537..45694)
                     /locus_tag="ACJJDE_000048"
     CDS             complement(44537..45694)
                     /locus_tag="ACJJDE_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HGG7540062.1"
                     /translation="MKFATKAIHSSYDCDEHNRALMPPIYQNSMFALHEIGENVPYRY
                     SRLSNPTRQILEDTVADLEHGAAGFAFSSGMAGIDAVWRTFLQPGDTIVAVADIYGGA
                     YDLLVDVYQKWGVNVVFADLGNPDNLDELLKAHKVKLVWLETPSNPLLRLVDIKALAA
                     KAKAAGALVGIDNTFATPYLQQPLDMGCDFVFHSATKYLCGHSDVLMGIVVAKTKELA
                     QPLHDMMVHTGAVAGPMDCWLVLRGIKTLALRMNAHYQNALEIARRLEAHPAIEKVFH
                     PGLPSHEHYELAKTQMPKGIGGVVTVYLKNDTREAANSVIKNMKLVKMASSLGGVESL
                     VNHCYSQSHSGVPHNVKMEMGIRVGLLRFSVGIEDVDDIWNDISAALDTTL"
     gene            45886..46659
                     /gene="folE2"
                     /locus_tag="ACJJDE_000049"
     CDS             45886..46659
                     /gene="folE2"
                     /locus_tag="ACJJDE_000049"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003933 - GTP cyclohydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase FolE2"
                     /protein_id="HGG7540063.1"
                     /translation="MNTIADVQSSRDLRNLPINQVGIKDLRFPITLQTAEGIQSTVAR
                     LTMTVYLPAEQKGTHMSRFVALMEQHTEALDFAQLRRLTAEMVALLDSRAGKISVSFP
                     FFRKKTAPVSGIRSLLDYDVSLTGEIKDGAYGHSMKVMIPVTSLCPCSKEISQYGAHN
                     QRSHVTVSLTADAEVGIEEVIDYVEAQASCQLYGLLKRPDEKYVTEKAYENPKFVEDM
                     VRDVATSLIADKRIKSFVVESENFESIHNHSAYAYIAYP"
     gene            46860..47525
                     /locus_tag="ACJJDE_000050"
     CDS             46860..47525
                     /locus_tag="ACJJDE_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HGG7540064.1"
                     /translation="MTVLSKEQVLSAFKNRKSCRHYDAARKISAEDFQFILELGRLSP
                     SSVGSEPWQFVVVQNPEIRQAIKPFSWGMADALDTASHLVVFLAKKNARFDSPFMLES
                     LKRRGVTEPDAMAKSLARYRAFQADDIKILDDSRALFDWCCRQTYIALGNMMTGAAMA
                     GIDSCPVEGFNYADMERVLSRQFGLFDAAEWGVSVAATFGYRVQEIATKARRPLEETV
                     IWA"
     gene            complement(47580..48338)
                     /locus_tag="ACJJDE_000051"
     CDS             complement(47580..48338)
                     /locus_tag="ACJJDE_000051"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7540065.1"
                     /translation="MNPKTPPDHTEDAVRLSKRMAQLGLCSRREADGYIEQGWVTVNG
                     KTAVLGQKVSPADRIELNKKAHEQQAARITILLNKPVGYVSAQAEKGYKSAAELITPE
                     NHWEGDTSRIRFDPKHKIGLAPAGRLDIDSVGLLVLTQDGRIAKQLIGENSGSEKEYL
                     VRVRGKLDEKGLALLNHGLSLDGEKLRPAQVEWQNEDQLRFVLKQGKKRQIRRMCELV
                     GLRVVGLKRIRMGKVKLGRLPPGKWRYLAPGESF"
     gene            complement(48363..49253)
                     /locus_tag="ACJJDE_000052"
     CDS             complement(48363..49253)
                     /locus_tag="ACJJDE_000052"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HGG7540066.1"
                     /translation="MNSPFHNIGIVTRPNTPDIQDTAHTLITFLKQHGFTVYLDEVGI
                     KEGCIYTQDTVGCHIVNKTELGQYCDLVAVLGGDGTFLSVAREIALRAVPIIGINQGH
                     LGFLTQIPREYMTDKLLPVLEGKYLAEERILIEAALIRESKTAERAIALNDAVLSRGG
                     AGQMIEFEVFVNREFVYTQRSDGLIVSTPTGSTAYSLAAGGPIMQAGLHAFTLVPICP
                     QSMTNRPIAIPDTSEIEILVTQGGDARVHFDGQTHIDVQNLDRITIRRYRNPLRILHP
                     TDYQYFKTLRQKLHWGEQLV"
     gene            complement(49273..49839)
                     /locus_tag="ACJJDE_000053"
     CDS             complement(49273..49839)
                     /locus_tag="ACJJDE_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032934 - sterol binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HGG7540067.1"
                     /translation="MSAFLPIINRLILQSPDSRSELAAFAGKTLTLNIAGLKLAGRIT
                     EDGLLSAGNGFADTEITFRNSAVQKILQGGEPGAGDIGLEGDLILGIAVLSLLGSLRS
                     RASDELARIFGTQADIGSRAADIGHGIKQIGRNIAEQIGGFSRESESANIGNEALADC
                     LDEISRLRDGVERLNERLDRLERDIWID"
     gene            complement(49890..50666)
                     /locus_tag="ACJJDE_000054"
     CDS             complement(49890..50666)
                     /locus_tag="ACJJDE_000054"
                     /EC_number="1.1.1.290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7540068.1"
                     /translation="MRAVPPPHISITGLGYLGLPLAQKFYQHGSRVAAIKRSLTSDDI
                     NLPIHLDTFDLGSTDAFQTALWRHHADKPVWFFLLPPSSLTHYADTVKQWAELARACN
                     VQHLIFTSSTSVYGDTARECDETATPDPQTESARQILAAEQHLLDSGISNIDILRLGG
                     LYCAERHPVSRLVQKQNIPGGNRPINIVHRNIAVESLFQTAFNPGGRRLKNIIEPRHP
                     TRREFYTEEAAKLGLPALDFAPDDSVGKIIRTVCDNGLSL"
     gene            complement(50721..51371)
                     /locus_tag="ACJJDE_000055"
     CDS             complement(50721..51371)
                     /locus_tag="ACJJDE_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HGG7540069.1"
                     /translation="MPVTRPAKINTYTRIIDASLALFNEEGERNISTNHIAAHLGISP
                     GNLYYHFRNKDEIIVQLFKRYSEALLEYLNEAVLPSDVEDSINYMAGIYDVMWEYRFL
                     FSDVNTLLARSAELLGEHNTFTQAKVSPLLVNLLTQLNGLNIIQADQTAMNDLAVNMW
                     MITKYWFDFDSSLRGRTKLTEDSKARGVRRTLSLLRPYLLPEHREKYDRKIGNGNP"
     gene            complement(51383..52423)
                     /gene="murB"
                     /locus_tag="ACJJDE_000056"
     CDS             complement(51383..52423)
                     /gene="murB"
                     /locus_tag="ACJJDE_000056"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HGG7540070.1"
                     /translation="MQPIRYRTDLTPYNTFGLRAQARAFIALEHADGLRDIVRLPEFN
                     RDTVLWLGGGSNILLMEDYAGLVVHMENKGIREIARSDGMVLIEAQAGEIWHDFVLHA
                     VALGLNGLENLSLIPGTVGASPVQNIGAYGVEAKDVIHSVRCFDLDTETFVTLSNADC
                     RFAYRESLFKQEGKGRYVIVSVVFALKTHFVPNLGYGDLAAAVAELSAGRVPTAKDVS
                     DAVCAIRNSKLPNPNVLGNVGSFFKNPVVSAEKAATLLQRHPDMPRYPQPDGSVKLAA
                     GWLIDQCRLKGFQIGGAAVHDRQALVLVNKNNASANDVRQLAQHIKFTVFARFQVELH
                     AEPNWLPASFSL"
     gene            complement(52601..53980)
                     /gene="norM"
                     /locus_tag="ACJJDE_000057"
     CDS             complement(52601..53980)
                     /gene="norM"
                     /locus_tag="ACJJDE_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter NorM"
                     /protein_id="HGG7540071.1"
                     /translation="MLLDLNRFSFSVFLKEVRLLTALALPMLLAQVAQVGIGFVDTVM
                     AGGAGKEDLAAVALGSSAFATVYITFMGIMAALNPMIAQLYGAGKTDEVGETGRQGIW
                     FGLFLGVFGMVLMWAAITPFRNWLTLSDYVEGTMAQYMLFTSLAMPAAMVHRALHAYA
                     SSLNRPRLIMLVSFAAFVLNVPLNYIFVYGKFGMPALGGAGCGLATMAVFWFSALALW
                     IYIAKENFFRPFGLTAKFGKPDWAVFKQIWKIGAPIGLSYFLEASAFSFIVFLIAPFG
                     EDYVAAQQVGISLSGILYMIPQSVGSAGTVRIGFSLGRREFSRARYISGVSLVSGWML
                     AVITVLSLVLFRSPLVSMYNNDPAVLSIAATVLLFAGLFQPADFTQCIASYALRGYKV
                     TKVPMFIHAAAFWGCGLLPGYLLAYRFDMGIYGFWTALIASLTIAAIALVWCLELCSR
                     EMVRSHKAV"
     gene            54315..55466
                     /locus_tag="ACJJDE_000058"
     CDS             54315..55466
                     /locus_tag="ACJJDE_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HGG7540072.1"
                     /translation="MQTWQLPEHIADVLPTNARQLESAREQLLALFRVHGYELVQPPL
                     MEYAHSLLTHIDAGLSLKTILVTDRLSGRQLGIRADITPQVARIDAHLLSANQGINRL
                     CYAGPVLHAQSDGLLNMREPLQAGAEMYGFADIRGDIELIDLMLKSMKIADMGKVLLS
                     LGHIGIFRALSDAAHLDAGQSATLLALMQDKDTETVEAQVKAWKLDGMWAKAFSLLPR
                     LYGGREVLSDARGRLPDLSAVGGALGELQAVCDAFPDCEIHIDLSELRVDNYHTGLLY
                     AAYAADFHDAVARGGRYDGLGGYFGRARPATGFSFDLRSFIGRLPTSERQPAVLVDAE
                     DAEAAREAVEALREQGQCVVIDYGIGHNVSEELAGRLKKTDGVWQVVKR"
     gene            55570..56868
                     /locus_tag="ACJJDE_000059"
     CDS             55570..56868
                     /locus_tag="ACJJDE_000059"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HGG7540073.1"
                     /translation="MAKNVVVIGAQWGDEGKGKIVDWLAEEAGGVVRFQGGHNAGHTL
                     VVGGKKTILRLIPSGILHESLDCFIGSGVVVSPEALLGEIDELNAAGVKNVEGRLKIA
                     PTCPLILPYHIALDQAREASRGKGKIGTTGRGIGPAYEDKVARRAIRAADLLHPEKLR
                     EKLDAILAYYNVQLQHLHNAEPVKAEDVMAVIEKVALRIAPMITDVSRVLNEKNKNGE
                     KLLFEGAQGALLDIDYGTYPFVTSSNCLAGAASAGAGVGPQMLDYVLGIVKAYTTRVG
                     SGPFPTELFDEVGAGLAERGHEFGSVTGRARRCGWFDAAALKRSIQINGISGMCITKL
                     DVMDGVETINICVGYELPDGGKTDILPCGSDAVETCKPIYETMEGWKESTFGIKNYEE
                     LPDNAKAYLKRIEEVCGAPVAIVSTGPDREETIVLHHPFA"
     gene            57333..57716
                     /locus_tag="ACJJDE_000060"
     CDS             57333..57716
                     /locus_tag="ACJJDE_000060"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7540074.1"
                     /translation="MPKSLSLQDVQLRFSSKFPDKTVLKFTKNYEPVTIQCPLHGSVV
                     YGNLQAAMKSSTGCPECTRNPEKPSPNAVAIRLEDTETGEIYEFASTLAASKFIGCSN
                     STLAVRLSGRTPFDRLIRYRYRLVK"
     gene            57730..58140
                     /locus_tag="ACJJDE_000061"
     CDS             57730..58140
                     /locus_tag="ACJJDE_000061"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7540075.1"
                     /translation="MALTFTQAVSKLTSKFPHLNLVEFNGVRYPTVIVCPIHGRVTCS
                     TFKSMLDSKSGCPKCASYGVNSHKIPEDTIDKLSKNTVLEDTVTGETLTFPSRASAAR
                     SLGINPAAITDRIKGRVHTETLLAGRYKVHICTK"
     gene            58257..58649
                     /locus_tag="ACJJDE_000062"
     CDS             58257..58649
                     /locus_tag="ACJJDE_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7540076.1"
                     /translation="MAKSFNQAASELTDIFPNISLTGFDGVNYPVTVNCPMHGNVRYS
                     TFNALIKSKYGCPECAKMSKTQTPPNVGKPLLILDTTTNETLTFPSVTAAGAALGVHF
                     QQINHRLKGRTSPDNLISNRYKVLGYDR"
     gene            58869..59030
                     /locus_tag="ACJJDE_000063"
                     /pseudo
     CDS             58869..59030
                     /locus_tag="ACJJDE_000063"
                     /inference="COORDINATES: protein motif:HMM:NF017109.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
     gene            59052..59249
                     /locus_tag="ACJJDE_000064"
     CDS             59052..59249
                     /locus_tag="ACJJDE_000064"
                     /inference="COORDINATES: protein motif:HMM:NF019096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUMOD1 domain-containing DNA-binding protein"
                     /protein_id="HGG7540077.1"
                     /translation="MKENTPPQNQKPVSILDTATGETLTFPSVQAAAKALNTPYGSIR
                     TKLDGRSNPDNLVCNRYKVLL"
     gene            59257..59922
                     /locus_tag="ACJJDE_000065"
     CDS             59257..59922
                     /locus_tag="ACJJDE_000065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540078.1"
                     /translation="MENIEEYALLSPEALLERLDTVLSIRIGGKGWESSMTANFAQTL
                     VEIQDSLYRVVSTVQYGDDNLKRLTADKRKQYELNFKISEGSTRVESDFKETLVRFGR
                     DMLQDMPPKIRSATLVALTTLLVGGALGYGYLEYLKQVASEGYQTERLYNAVDRLAES
                     QERITSAILKGARGADFVQIGRRSYSREDISEANRRAERVPYGAELVSDGNFTAVLSD
                     IGD"
     gene            complement(60225..61064)
                     /gene="htpX"
                     /locus_tag="ACJJDE_000066"
     CDS             complement(60225..61064)
                     /gene="htpX"
                     /locus_tag="ACJJDE_000066"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HGG7540079.1"
                     /translation="MKRIFLFLATNIAVLVVINIVLAVLGINSRGGTGSLLAYSAVVG
                     FTGSIISLLMSKFIAKQSVGAEVIDTPRTEEEAWLLNTVEAQARQWNLKTPEVAIYHS
                     PEPNAFATGASRNSSLIAVSTGLLDHMTRDEVEAVLAHEMAHVGNGDMVTLTLIQGVV
                     NTFVVFLSRIIANLIARNNDGSQSQGTYFLVSMVFQILFGFLASLIVMWFSRQREYRA
                     DAGAAKLVGAPKMISALQRLKGNPVDLPEEMNAMGIAGDTRDSLLSTHPSLDNRIARL
                     KSL"
     gene            61279..61926
                     /gene="adk"
                     /locus_tag="ACJJDE_000067"
     CDS             61279..61926
                     /gene="adk"
                     /locus_tag="ACJJDE_000067"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004017 - adenylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HGG7540080.1"
                     /translation="MKALFLGAPGAGKGTQAQFITAAFGIPQISTGDMLRAAIKAGTP
                     LGLEAKKIIDEGGLVRDDIIIGMVKERIAQDDCKNGFLFDGFPRTLAQAEAMVEAGVD
                     LDAVVEIDVPDSVIVDRMSGRRVHLASGRTYHVTYNPPKVEGKDDVTGEDLIQRDDDK
                     EETVKKRLAVYHEQTEVLVDFYSKLEGEHAPKYIKVDGTQPVEAVKAEVLGALGK"
     gene            62452..63192
                     /gene="pyrF"
                     /locus_tag="ACJJDE_000068"
     CDS             62452..63192
                     /gene="pyrF"
                     /locus_tag="ACJJDE_000068"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003756133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HGG7540081.1"
                     /translation="MNPLISDFQTPQQRTPVIVALDFSNEKDTLGFVRNLDPTLCQIK
                     IGKELFTATGRNLAESLINQGFKLFLDLKYHDIPHTVAQACKVAADMGVWMVDMHASG
                     GRRMMEAAAEAVAGYGTKPLLIGVTVLTSMEQSDLAEIGLNTAPEEQVIRLAKLAQSS
                     GLDGVVCSAQEAAPLRRELGQDFVLVTPGIRLDVAGNNDDQRRIMTPAEALAAASTYL
                     VMGRPVTQAADPVAVLREVNRVANLEAN"
     gene            63247..64218
                     /gene="hldA"
                     /locus_tag="ACJJDE_000069"
     CDS             63247..64218
                     /gene="hldA"
                     /locus_tag="ACJJDE_000069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose synthase"
                     /protein_id="HGG7540082.1"
                     /translation="MSAKFQQETLKSRFAQAKVLVVGDVMLDRYWFGDVSRISPEAPV
                     PVAKIGRIDQRAGGAANVARNIASLGGRAGLLSVTGNDEAADALDALMVQDGVASYLM
                     RDKQIATTVKLRVVARNQQLIRLDFEEHPNCEVLEQIKQKYREILPEYDAIIFSDYGK
                     GGLSHISDMIDWAKHAGKTVLIDPKGDDYEKYVGATLITPNRAELKEVVGSWKNESEL
                     TEKAQNLRRHLDLTAVLLTRSEEGMTLFSEGEPIYQPTRAQEVYDVSGAGDTVIAGMG
                     LGLAAGCTMPEAMYLANTAAGVVVAKLGTAVCSFAELIKALSGQSTM"
     gene            64255..65490
                     /locus_tag="ACJJDE_000070"
     CDS             64255..65490
                     /locus_tag="ACJJDE_000070"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7540083.1"
                     /translation="MTISTMAQTHDTRLQKTLLFPSQQGWKSKTFLKPDSHIRLATVF
                     SGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHNDITQFDARKFRN
                     QVDILVGGSPCQAFSMVGKRAGLEDTRGTLFYEFSRVVDEVQPKIFIYENVKGLLNHD
                     NGKTWKVVKSVFYSLGYDLYFQIMNSKDYGIPQHRERIFVVGFHTPPINGFQFPEKIE
                     LEHTMQDFLEDYTDSKYFLREKGVKFVTSSKNRQKRYTQINGEIALCQKANQQFNWHG
                     DFIFQAARESEFDDFIFDVNNVEEKYYLSEKIKNYVLAGGTKNFKTSTETDLPVARPL
                     LQTMHKMHRAGVDNYVTHNRGRIRKLTPRECLRLMGFRDDFKILVSDTQMYRQAGNSI
                     VVDVLIAILKQMDITLYGE"
     gene            65492..66610
                     /locus_tag="ACJJDE_000071"
     CDS             65492..66610
                     /locus_tag="ACJJDE_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7540084.1"
                     /translation="MPDFQRITIENIEYFIVDSIQNLRAEDSFIHRNNKLSVFGGNGE
                     ARKYVGSYIDDSGRKLSTFFEYENWGITETKNGRRVEYPLIQKNCFFNKKNLQRYLVD
                     AKVEYHKQEQKYHHDISRFYDDYVLSINNLPTENIFFSIHDVSDHLENSKGYRRGYIR
                     SEDDIWSIWRKIVLPKISYLSILKLLPVKDIEDSEPLFYFRIFLDYQFRSIVHPQLLS
                     REKLEIPASEFNQFVEQEIIKQKSRKGQQKYRKDVINHMPQCPFTLITDEVLLRASHI
                     KPYMVCITEKNEKEALDYLNGLALTPTYDWLFDQGYITFLDDGRLICGTRLSRYTWEK
                     LNINPNAKNKMRIYPEGREKYLEYHRKFVFQDNIDDFL"
     gene            66651..67655
                     /gene="rfaD"
                     /locus_tag="ACJJDE_000072"
     CDS             66651..67655
                     /gene="rfaD"
                     /locus_tag="ACJJDE_000072"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HGG7540085.1"
                     /translation="MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLA
                     ECEIAHYLDKHEFIRQVREHILPYQNIEAVFHQGACSDTMNHDGLYMMENNYQYTLDL
                     LNWCQDERIPFLYASSAAVYGKGEIFREERELEKPLNVYGYSKFLFDQVLRRRMKEGL
                     TAQVVGFRYFNVYGQHEQHKGRMASVTFHHFHQYREHGYVNLFGSNDGYGNGEQTRDF
                     VSVEDVAKVNLYFFDHPELSGIYNLGTGRSQQFNELAAATVNACRAAEGKPEMSLKEL
                     VEEELIRYIPFPDALKGKYQSFTQADITKLREAGYTEEFFDVKSGVERYVKWMLENLA
                     "
     gene            67728..69272
                     /locus_tag="ACJJDE_000073"
     CDS             67728..69272
                     /locus_tag="ACJJDE_000073"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009007 - site-specific
                     DNA-methyltransferase (adenine-specific) activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction-modification system subunit
                     M"
                     /protein_id="HGG7540086.1"
                     /translation="MMTEMQQRAQLHRQIWKIADEVRGAVDGWDFKQYVLGTLFYRFI
                     SENFTDYMQAGDSSIDYAAMPDSIITPEIKDDAVKVKGYFIYPSQLFCNIAAEAHQNE
                     ELNTKLKEIFTAIESSASGYPSEQDIKGLFDDFDTTSSRLGSTVADKNKRLAAVLKGV
                     AELDFGSFEDHHIDLFGDAYEYLISNYAANAGKSGGEFFTPQSVSKLIARLAVHGQEK
                     VNKIYDPACGSGSLLLQAKKQFDEHIIEEGFFGQEINHTTYNLARMNMFLHNVNYNKF
                     HIELGDTLTNPKLKDSKPFDAIVSNPPYSINWIGSDDPTLINDDRFAPAGVLAPKSKA
                     DFAFILHALNYLSGRGRAAIVSFPGIFYRGGAEQKIRQYLVEGNYVETVIALAPNLFY
                     GTGIAVNILVLSKHKDNTDIQFIDAGSFFKKETNNNVLTEEHIADIVKLFADKADVPH
                     IAQNAAQQTVKDNGYNLAVSSYVEPEDTREIIDIKQLNAEIGETVAKIERLRREIDEV
                     IAEIEA"
     gene            69389..69472
                     /locus_tag="ACJJDE_000074"
                     /pseudo
     CDS             69389..69472
                     /locus_tag="ACJJDE_000074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-damage-inducible D domain protein"
     gene            69603..69944
                     /locus_tag="ACJJDE_000075"
     CDS             69603..69944
                     /locus_tag="ACJJDE_000075"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7540087.1"
                     /translation="MDIQSKAKKLIEMIQTAPVEWKPLGEVASIGKGKQLNKSLLREK
                     DKYPVINGGINPSGYWHEYNNEAGTIVISQGGASAGFVNWMDIPFFAGAHAYTIKANE
                     DKLLQRFAYYF"
     gene            69947..70186
                     /locus_tag="ACJJDE_000076"
     CDS             69947..70186
                     /locus_tag="ACJJDE_000076"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7540088.1"
                     /translation="MKQITFMQCQYGAGIPALAKSELQNLLIPIPPLETQQKIVKILD
                     KFTELEAELALRKRQYRYYRDFLLDFDNQIGGGDS"
     gene            70212..70772
                     /locus_tag="ACJJDE_000077"
     CDS             70212..70772
                     /locus_tag="ACJJDE_000077"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF013579.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HGG7540089.1"
                     /translation="MVWKTLGEIAEYSKNRICSDKLNEHNYVGVDNLLQNREGKKLSG
                     YVPSEGKMTEYIANDILIGNIRPYLKKIWQADCTGGTNGDVLVIRVTDEKVNPKYLYQ
                     VLADDKFFAFNMKHAKGAKMPRGSKAAIMQYKIPIPPLPEQEKIVAILDKFDTLTHSV
                     SEGLPYEIALRRKQYEYYREQLLAFR"
     gene            70759..70980
                     /locus_tag="ACJJDE_000078"
     CDS             70759..70980
                     /locus_tag="ACJJDE_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540090.1"
                     /translation="MPFGRVGFSPPKQQQAATTVKQRQAGRWAEAHPTASGNRPAFRH
                     SVWKPENMAADAQNKEKKPIEMIQTASVG"
     gene            71164..71276
                     /locus_tag="ACJJDE_000079"
                     /pseudo
     CDS             71164..71276
                     /locus_tag="ACJJDE_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            71307..74438
                     /locus_tag="ACJJDE_000080"
     CDS             71307..74438
                     /locus_tag="ACJJDE_000080"
                     /EC_number="3.1.21.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009035 - type I site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I restriction endonuclease subunit R"
                     /protein_id="HGG7540091.1"
                     /translation="MNLETKPIAETPNFIVLDQYEKIEQSGSYQSENQLEAELIADLQ
                     NQGYEYRKDLNSQSRLLENLRAQLQRLNDVAFSDGEWARFLTEYLDRPSENITDKTRK
                     IHDDHIYDFAFDDGRLKNIYLLDKKNLARNHVQLINQFEQTGTHANRYDVTVLVNGLP
                     LVQIELKKRGVAVREAFNQVHRYSKESFNSENSLFKFLQIFVISNGTDTRYFANTTKR
                     DKNSFDFTMNWARSDNHPIKDLKDFTATFLQKSVLLGVLLHYSVFDANDTLLIMRPYQ
                     IAAAERILWKINSSAQAKNWSGPESGGYVWHTTGSGKTLTSFKAARLATESAFIDKVF
                     FVVDRKDLDYQTMKEYQRFSTDSVNGSESTAGLKRNLEKDDNKIIVTTIQKLNNLMKS
                     EDNLPVYHQQVVFIFDECHRSQFGEAQKNLKKKFKKFCQFGFTGTPIFHDHIVDGKLI
                     MKGNALGSESTESVFGRQLHSYVITDAIRDEKVLKFKVDYNDVRPQFKAVEAEQDEKK
                     LSAAENRQALLHPERIREITQYILNQFRQKTHRLNAGGKGFNAMFAVSSVDAAKCYYE
                     AFKTQQAGSLHPLKVATIFSFAANEEQNAVGEIADETFEPEAMDSSAKEFLQAAINDY
                     NACFKTNFGTDSKAFQNYYRDLAKRVKNQEVDLLIVVGMFLTGFDAPTLNTLFVDKNL
                     RYHGLMQAFSRTNRIYDATKTFGNIVCFRDLEQATIDAITLFGDKNTKNVVLEKSYEE
                     YMNGYTDSQTGEARRGYLDVAKELHERFPDPDKIETEKDKKDFAKLFGEYLRAENVLQ
                     NYDEFAALRELQSVDAADEDAMKAFQEKYYLSDEDVQEMRQVPMPSERAVQDYRSAYN
                     DIRDWLRRQKAGEQKEQSKIDWDDVVFEVDLLKSQEINLDYILQLIFEHHKKIKGKAE
                     LVEEIRRIIRASIGHRAKESLIVDFINDTDLDKVPDVPAILETFYTYAQEVMRNEAAE
                     LIAAEGLNETAAKRYLISSLKRGYASENGTELTETMPKMSPLNPQYLTKKQSVFQKIA
                     AFVEKFAGIGTDI"
     gene            complement(74478..76769)
                     /gene="clpA"
                     /locus_tag="ACJJDE_000081"
     CDS             complement(74478..76769)
                     /gene="clpA"
                     /locus_tag="ACJJDE_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0043335 - protein unfolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HGG7540092.1"
                     /translation="MLAPELEQILQQLYREARKAHYEFISLEHLLLVLIEEDASVPNV
                     LKLCGADLKVVSEQLAASVAENTPLIPEHLLDTVETRPTLGFQRVMQRAMVHTQSAGK
                     AAVEPLDVLVALMSETDSHTVYFLKLQSVTRFEVLRCIAHGSPDEDEDDGNYSSDGMD
                     DDNENRTKPGKNPLSAYTVNLNAEVKAGRIDPLIGRKHEMERLVQILCRRRKNNPLLV
                     GEAGVGKTALAEGLAHQIVNGGIPDALKDAEVYALDMGSLLAGTKYRGDFEARVKSVL
                     KQLEKIPHAILFIDEIHTIIGAGSTSGGTMDASNLLKPALAKGSLRCIGATTYDEYRT
                     IFDKDHALSRRFQKIDVVEPTVSETVQILRGLKPMFEAFHQVRYTQGALEAAAELSAR
                     YINERFLPDKAIDVMDEAGAAQRILPKSKQKKVIGKAQIETVIAKVARIPEKTVSHDD
                     KQVLQFLGRDLKNMVYGQENAIDALVAAVKMSRSGLALPDKPIGSFLFSGPTGVGKTE
                     AAKQLAYSLGVPLQRFDMSEYMERHAVSRLIGAPPGYVGFEQGGLLTEAVNKQPHCVL
                     LLDEIEKAHPDIFNVLLQVMDAGKLTDNNGKSADFRNVILIMTTNAGAESLSRPSLGF
                     TAKRERGDEMQAINKLFTPEFRNRLDAIIPFAPLSEPIIVKVVDKFLLQLEHQLLDKK
                     VEAEFTSALHKYLAEKGFDPQMGARPMHRLIQEKIRKPLADELLFGKLSDGGFVRIDW
                     DAAKEEAVLKFKKSKVKIKTASA"
     gene            complement(76771..77073)
                     /gene="clpS"
                     /locus_tag="ACJJDE_000082"
     CDS             complement(76771..77073)
                     /gene="clpS"
                     /locus_tag="ACJJDE_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HGG7540093.1"
                     /translation="MTAQHQSDTLLHRLNTLPPKRYGVFLLNDDYTTMEFVVEILTEI
                     FMLGQEQAVAVMLLVHHEGKGLCGTYTRDIAQTKQQQVMQRAKAEGHPLQCIVEEI"
     gene            77316..77519
                     /locus_tag="ACJJDE_000083"
     CDS             77316..77519
                     /locus_tag="ACJJDE_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HGG7540094.1"
                     /translation="MATGIVKWFNDAKGFGFITPDEGGEDLFAHFSAINMEGFKTLKE
                     GQRVSFDVTTGPKGKQAANIQAA"
     gene            complement(77816..79147)
                     /gene="pmbA"
                     /locus_tag="ACJJDE_000084"
     CDS             complement(77816..79147)
                     /gene="pmbA"
                     /locus_tag="ACJJDE_000084"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HGG7540095.1"
                     /translation="MLFNHTASELLDLCRRTLDLAKAAGATAAEADFSESLGQSVSVR
                     LGEIEQIEFQQDKSLDITVYVGKRKGRASTADFSEKALQDTVKAAIDIARYTAEDDCA
                     GLADASLMAQHIGDPDLYHEWDLDTEAAVELAKQCEQAALNEDERIENSEGAAVQTGH
                     YQYVYGNTHGFAAHQQGTRHSISCSVVAADENGMQRDYWYDSSCRHQDMDSPTQIGQT
                     AAERTLRRLNSRSIPTGSYPVLFDATVSGGLIGHLVGALSGGSLYRQSSFLIDSIGKQ
                     VLPDFLSLREEPHIPRAFGSTYFDSEGVATRPRFVIRDGIVEGYFLSSYSARKLGMQT
                     TGNAGGAHNLYLNHTHETQSDLLKEMGTGLLVTELMGQGANTITGDYSRGAAGFWVEN
                     GVIAYPVHEITVAGRLQDMYRDIVGVADDALRRSSNKIGSILIAGMTVAGS"
     gene            79302..79808
                     /gene="yjgA"
                     /locus_tag="ACJJDE_000085"
     CDS             79302..79808
                     /gene="yjgA"
                     /locus_tag="ACJJDE_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis factor YjgA"
                     /protein_id="HGG7540096.1"
                     /translation="MFEQEDEWVSKTQMKKQMNGLQDLGMELTKLSSDTLKKIGLDED
                     LYEAVVTYKKITSNGALKRQAQFIGRLMRDTDPAPIEAFLAKLRGDDAVHNAFLQRVE
                     QARVRLLADDGALMQFMSDFPHADAGKLRTLVRNTKKEQEQNKPPKNFRALFQELKTV
                     MENGDAEI"
     gene            79855..80574
                     /locus_tag="ACJJDE_000086"
     CDS             79855..80574
                     /locus_tag="ACJJDE_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540097.1"
                     /translation="MLFRKTTAAVLAAALMLNGCTAMMWGMNDPFSQTTAYKHVDKDQ
                     IRAFGVVAKDNAQLEKGSLVMMGGKYWFVVNPEDSAKLTGILKAGLDKPFQIVEDTPS
                     YARHQALPVKLESPGSQNFSTEGLCLRYDTDKPADIAKLKQLGFEAVKLDNRTIYTRC
                     VSAKGKYYATPQKLNADYHFEQSVPADIYYTVTEKHTDKSKLFANILYTPPPFLILDA
                     AGAVLALPVAALIAATNSSDK"
     gene            80643..82343
                     /gene="recJ"
                     /locus_tag="ACJJDE_000087"
     CDS             80643..82343
                     /gene="recJ"
                     /locus_tag="ACJJDE_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008409 - 5'-3' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HGG7540098.1"
                     /translation="MSVKIQTRSVNTDVFNHLLTAGADPLIARLCASRGVQSPAELDD
                     KLASLLPYQTLTNCEAAARRLADAVERQEKILIVADYDADGATACAVGLDGLAAMGAK
                     VDFLVPNRFEHGYGLTPELAEIAAAQGVDLLITVDNGIASIAGVARAQELGLDVIVTD
                     HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLMALRAELRRRNYFSDGLKEP
                     NLGDLLDLVALGTVADVVSLDHNNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKA
                     QPFDMGFALGPRINAAGRLDDMSVGIACLLARDDVEAQELAAQLNNLNIERREIEQSM
                     LQDALNAFPETLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFYRPTIVFAPADNGEVR
                     GSGRSIPNLHLRDALDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTSFEEAVRE
                     MVCEDDLSQTFITDGSLPACDITLEQAQNLARHVWGQGFAPPSFTDEFHVVRQQPLGA
                     EGKHKKVWLQKDGCEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYIDYWEAV
                     "
BASE COUNT        19625 a        20455 c        22918 g        19569 t
ORIGIN      
        1 agaaaaccgc caaggcggtg cttgacggcg gaaacggaga ggcgggcggc atcagagcag
       61 cttggaaacg acctgcgcaa gggctttttg ccagtctgac ggtttgatgc cgaagtcgtt
      121 ttcgattttg cggcagtcca aaatgctgta tgcgggcctg ggggcggcgg tcggatattc
      181 cttgtctgaa acggcagtca attcgggaac ggggaaggat gtctgctgtt gcgatgccgc
      241 ttggaaaata tgttgggcaa attcatacca ggatacggat ttgccgccgg cgtagtggta
      301 aatgccgcgc acgggcgacg tttgctgcaa aaggcggatg atggcggcag ctaaatcgcc
      361 ggcataggtc gggcagccga tttggttgtg gacggcggac agcggggaac gttcccgcgc
      421 aaggttcagc atcgtgcgga caaagttgtc cccgtattcg ctaaacagcc aagaagtccg
      481 caggataagg ctgtcgggat tggcagacag tgcgagcagc tcgcctgcgg ttttggattg
      541 tccgtataca ttggaaggat tggtaaagtc gctttcctga tagggccttt tccctttacc
      601 gtcaaagata tagtcggttg agatgtggat gaatcgggca tgggcgcgat gtgctgccaa
      661 ggcaaggttg taaacggcgg aagcattgac ggcaaatgcc gctgccgcat tgccttccgc
      721 tttgtcgacg gcagtatagg cagccgtgtt gacaatggcg tcgggttgga aacttttgac
      781 catgttgcag acggcatcgg catcggtaat gtctagggat gcggaatccg tcgcaatggt
      841 ttcccagtct tccggaagac ggtcgcgcag gcagcgtgcc agttggcttt tcgagcctgt
      901 caataggatt ctcatgaggt atttcctttg gtaaaagtgt attgtaggac ttgctgtcgg
      961 tattatagtg ccaaaacttt gccgacggtt gacgggttgg ttttttgtgc catgggtatt
     1021 gttttgcgcc gacttcggct agaatattgg tttgtgattc aaacctgtcg ggtgtcgggt
     1081 cggtattttc aagatatttt cagggggggg cgaaatgagt gagattggtt tggtaaagat
     1141 ctattttgga aaagtgcgcg atttatatga aatcgacgat aaacgtatgc tgatggtcgc
     1201 ttccgaccgc ctgtctgcat tcgatgtgat tttggacgac ccgattccga gcaaagggga
     1261 gattctgacg cagatttcca atttttggtt taaaaaactg gtgcatatta tgcccaacca
     1321 ctttaccggt caaacggttt acgatgtttt gcctgaaaac gaagccaaag ctttagagaa
     1381 acgcgccgtc gtggctaaaa agctcactcc ggtgaaagta gaggcgattg tgcgtggtta
     1441 tctggcaggc agcggttgga aagattatca aaaaaccggc tcggtttgcg gtattcaact
     1501 gcctgaaggt atgcaggaag cgcaacaact gcctgaagtg atttttacgc cctcaaccaa
     1561 agccgcagtc ggcgatcacg atgaaaacat cagctttgaa gaatgcgaac gcattatcgg
     1621 aaaagaattg gcggcggaag tgcgcgccaa agcgattcag ctttatacag aagcggcgga
     1681 atatgccaaa tcgcgcggca tcatcatttg cgataccaaa tttgaattcg gtttggatac
     1741 aaacggtacg ctgacgctga tggatgaggt attgactccc gattcgagcc gtttttggcc
     1801 tgccgaccaa tacaaagtcg gcaccaatcc gccgtctttt gacaaacaat tcgtccgcga
     1861 ctggctggaa caaagcggtt ggaacaaaaa agcccctgcg ccgaaagtgc ctgccgatgt
     1921 gattcagaaa actgtcgaga agtatcggga agcattgact ttgctgactc aggattgatt
     1981 tttaagtttg aaggccgtct gaaagaaata tggttcagac ggccttttta ttgtatcaat
     2041 actggatttt aatgatggtt gcctttataa tttggaattg ctttcagcgt ccgaaatgtc
     2101 gtctgaaagc ttgtttacaa cctgccgcac ggtctgaaac cctaactatg cacattcgga
     2161 ttttagtgtg cattattagt gttttagcag tgcggtattt tgaaaggaac aataatgttc
     2221 gacaaacacg ttaaaacttt ccaatacggc aaccacaccg ttactttgga aaccggcgaa
     2281 attgcccgcc aagccgccgc tgccgttaaa gtctctatgg gcgacaccgt ggttttggtt
     2341 gccgttacca ccaacaaaga agtgaaagaa ggccaagact tcttccctct gactgtcgat
     2401 tacctcgagc gcacttacgc cgcaggcaaa attcccggcg gtttcttcaa acgcgaaggc
     2461 aaacaaagcg aaaaagaaat cctgaccagc cgtctgatcg accgtccgat tcgtccgctg
     2521 ttccctgaag gtttctacca cgacatccaa atcgtagcga tggtcgtgtc cgtcgatcct
     2581 gaaatcgatt ctgatattcc tgcaatgttg ggcgcgtctg ccgcgctggt gttgagcggc
     2641 gtaccgtttg ccggcccgat cggcgcggca cgcgtcggtt atgtaaacgg cgtgtacgtt
     2701 ttgaacccga ctaaagccga attggcgaaa tcgcaattgg acttggtggt cgccggtact
     2761 tccaaagccg tgttgatggt ggaatccgaa gccaaaatcc tgcccgaaga cgtgatgctg
     2821 ggcgcggtgg tttacggcca cgatcaaatg caggttgcca tcaatgcaat caatgaattt
     2881 gccgacgaag tcaatccgga actttgggat tggaaagcac ctgaaaccaa tgaggaactg
     2941 gttgccaaag tccgcgggat tgccggcgaa accattaaag aagcgttcaa aatccgtcaa
     3001 aaacaagcgc gttctgccaa attggacgaa gcttggagtg cggtaaaaga agccttgatt
     3061 accgaagaaa ccgacacgct ggcagccaac gaaatcaaag gcattttcaa acacttggaa
     3121 gccgatgtcg tccgcagcca aattttggac ggccaaccgc gcatcgacgg ccgcgacacc
     3181 cgcaccgtcc gtccgctgaa catccaaacc ggcgtattgc cgcgcacgca cggttccgca
     3241 ttgtttaccc gtggcgaaac ccaagccctt gccgtagcga ctttgggtac ttcgcgcgac
     3301 gagcaaatca tcgacgcgct gtccggcgaa tacaccgacc gctttatgct gcactacaac
     3361 tttccgccgt actctaccgg cgaagtgggc cgcatgggcg cgccgaaacg ccgtgaaatc
     3421 ggtcacggcc gtttggctaa acgtgcattg ttggccgtat tgccgaaacc tgaagatttc
     3481 agctacacca tgcgcgtggt ctccgaaatt accgaatcta acggctcttc ctctatggct
     3541 tccgtctgcg gcggctgttt gagcctgctg tctgccggcg tgcctttgaa agcacacgtt
     3601 gccggtatcg cgatgggtct gattctggaa ggcaacaaat ttgccgtcct gaccgacatt
     3661 ttgggcgacg aagaccactt gggcgatatg gactttaaag tggccggtac gaccgaaggc
     3721 gttaccgcgc tgcaaatgga catcaaaatc caaggcatta ccaaagaaat tatgcaaatc
     3781 gctttggcac aggccaaaga agcgcgtctg cacatcttgg atcagatgaa agccgccgtt
     3841 gcgggcccgc aagagttgtc cgcacacgcg ccgcgtttgt ttacgatgaa aatcaaccaa
     3901 gacaaaatcc gcgaagttat cggtaagggc ggtgaaacca tccgtgcgat taccgctgaa
     3961 accggtacgg aaatcaatat tgccgaagac ggtacgatta ccattgccgc gaccactcaa
     4021 gaagccggcg atgcggcgaa aaaacgcatc gagcagatta ctgccgaagt ggaagtgggc
     4081 aaagtgtatg aaggcactgt ggtgaaaatc ctcgacaaca acgtcggcgc gattgtcagc
     4141 gtgatgccgg gcaaagacgg tttggtacac atcagccaaa tcgcccacga gcgcgtacgc
     4201 aatgtcggcg actacctgca agtcggtcag gtggtgaacg tgaaagcatt ggaagtggac
     4261 gacagaggcc gtgtccgtct gtccatcaaa gccctgctgg acgcgcctgc ccgtgaggaa
     4321 aatgccgccg agtaacgctt agggtgaaag tgccgtctga acaggtttca gacggtattt
     4381 tttacgggta tcgggaatga atggggctta cagccacagg acggcaagtt tccataatgc
     4441 ccataatgat acggataatc ccgtacacag gcggatatat cggttttgca tgattttttt
     4501 cagttgcagg gaaaaaatgc cgattgccaa aagattgggc agcgtaccca gtgcaaaggc
     4561 aagcatatat aacccgcccg ttgccgcact accgcttccc agcgcgtaaa gcgacgcgct
     4621 gtaaaccagt ccgcacggca gccagcccca taatattccg accgcaaggc aggcgggtat
     4681 ggattttatg ggtaacagcc ggttgagtat cgggttcagg ttccgccata tcggtttgcc
     4741 gattttctcg atttttgccg ccaaggaaga aataccgctc aagtataagc ccaaaaagag
     4801 cagcaggagg ttggcggccg tgtataaaat attctgcagg acgcgggttt ggtcgagtga
     4861 aacgccgacc tgtccgatta atccgagtat caggccgatt gccgtatagc tgcttacccg
     4921 tcctgtgtta agcagcagga tcagccaaaa tcggttgata tgcgggggga gttggagcgc
     4981 aaacgcgctg cttaatccgc cgcacatacc gatgcagtgc gttccgccga agaaaccgag
     5041 taggaacagg gtgaggaaag tgatgtcgtg gttcataggc agtttgaagt caaatatttt
     5101 tcgggaaaag ggatgatttg cggcagtccg gcacatagga tccgccgagg gcattgcccg
     5161 tgctgttaaa gtcttgaata aggatgcagt ttgcaccctg tatttcgata attttgtaaa
     5221 atccgccctt tactgcgccg tcggcgggtt tgccgtgtgc gtcaaaatac aggatggtgc
     5281 ggttttgaag atgcgcgcaa tttgaaacgg cggggcttgc cggtatgttt cgggcgcagg
     5341 cggcaaggat tgcacaaggg aaaagcaaca gtaatatgcg gaacatggtg tttcttgtaa
     5401 ggggtaacaa acagtataat ggctgatttt aatcctcagg cggcgggaga tggaagcatt
     5461 tcccttcggt gcgggggatt tcggattcgg aagcaacaga cgatacggga tttcggaaca
     5521 atatgaacac tttgaaattt accaaaatgc acggtttggg caacgatttt atggtgattg
     5581 acgcggtcag tcaggatttt acccccgagg acgcgccgat tgcggcatgg gcggaccgct
     5641 tccggggcgt gggcttcgac cagcttttgg tggtcgggcg ttcggaaacc gaaggcgtgg
     5701 atttccgtta ccgtattttc aatgccgacg gtagcgaggt cgagcaatgc ggcaacggag
     5761 cgcgttgttt tgcccgtttt gttgcagaca agggtttgac cgataagaaa gaaatttgtg
     5821 ttgaaacggc aaatggcgtt atttttccga aattgtccga taacggcatg gttacggtca
     5881 atatgggcaa accgaggttt atgccgtctg aaataccgtt tgtccccgaa tcgggcgagg
     5941 gggatgatgc ctgtatttac ggggtgcatc tcgaatccgg cattcagcct gtcagctgcg
     6001 tcaatatggg caacccccat gcggtgattg tggtcgatga cgtagaatgc gcgccggtgc
     6061 gcgaaaccgg ttcgcttatc gaaccgcaca ggcagtttcc cgaacgcgtc aacgtcggct
     6121 ttatgcagat tgtcagccga accgcgattc gtttgcgcgt gttcgagcgc ggcgtgggcg
     6181 aaacccaagc gtgcggtacg ggcgcgtgtg cggctgtggt ggcgggtatc cgtctggggt
     6241 tgttggatga agggaaaacg gtagaggtga ttttgccggg cgggacttta tatatcgaat
     6301 gggcctgcgg cggcgatgtg atgatgaccg gccctgcgga agcggtgttt gaaggcgagt
     6361 tggcgtattc atgattttgc tgcatttgga ttttttgtct gccttactgt atgcggcggt
     6421 ttttctgttt ctgatattcc gcgcaggaat gttgcaatgg ttttgggcga gtattatgct
     6481 gtggctgggc atatcggttt tgggggcaaa gctgatgccc ggcatatggg gaatgacccg
     6541 cgccgcgccc ttgttcatcc cccattttta cctgactttg ggcagcatat tttttttcat
     6601 cgggcattgg aaccggaaaa cggatggaaa cggatggcag gcagaccccg aacatcctct
     6661 gctcgggctg tttgccgtca gtaatgtatc gatgacgctt gcttttgtcg gaatatgtgc
     6721 gttggtgcat tattgctttt cgggaacggt tcaagtgttt gtgtttgcgg cactgctcaa
     6781 actttatgcg ctgaagccgg tttattggtt cgtgttgcag tttgtgctga tggcggttgc
     6841 ctatgtccac cgctgcggta tagaccggca gccgccgtca acgttcggcg gctcgcagct
     6901 gcgactcggc gggttgacgg cagcgttgat gcaggtctcg gtactggtgc tgctgctttc
     6961 agaaattgga agataatacg gtgcggccgt atcggaacaa aaagttataa agaaagaaat
     7021 tttggatatt ggttttttag gcggcatagg tttaggataa agccatatcc gaaatttgtt
     7081 tatgtttcgg cgcaaatccc ctgcaatcgg acaggatgcc tatggggatt gcgccttact
     7141 gtcgaaacct tattattcag gagcagaaga tgaaaattgc aaacagcatc accgaactaa
     7201 tcggcaacac gcctttggtc aaactgaacc gtctgaccga aggtttgaag gcggaggttg
     7261 ccgtgaaact ggaatttttc aatccaggca gcagcgtcaa agaccgcatt gccgaagcaa
     7321 tgatcgaggg tgccgaaaaa gcgggcaaaa tcaacaaaaa caccgtcatt gtcgaagcaa
     7381 ccagcggcaa tacgggtgtc ggtttggcaa tggtatgtgc cgcacgcggc tacaagctgg
     7441 cgattaccat gccggaaagc atgagtaagg agcgcaaaat gctgttgcgc gcgtttggtg
     7501 cggagctgat tctgacccct gccgccgaag gtatggcggg cgcgattgcc aaagcgaaat
     7561 ccttggtgga cgcgcatccc gacacttatt ttatgccgcg ccagttcgac aatgaggcaa
     7621 accccgaagt ccaccgcaaa acaaccgccg aggaaatttg gcgggatacg gacggcaaag
     7681 tcgatgtctt cgttgccggc gtcggcacgg gcggtacgat taccggcgtg ggcgaagtgt
     7741 tgaaaaaata caaacccgaa gttaaagtgg ttgccgtcga gcctgaagct tcacccgtat
     7801 tgagcggcgg cgaaaaaggc ccgcacccga ttcaaggcat cggcgcaggc tttattccga
     7861 ccgttttgaa taccaaaatt tacgacagca ttaccaaagt gccgaacgaa gcggcttttg
     7921 aaaccgcccg cgcaatagcg gaaaaagaag gcattttggt gggtatttct tccggtgcgg
     7981 cggtttggag tgcgttgcag cttgccaaac agcctgaaaa cgaaggcaag ctgatagtcg
     8041 tgctgctgcc ttcttatggc gaacgctatc tctctacgcc actttttgca gatttggcat
     8101 aatgctttaa tcggattgtc gaaacattca gacgcatttt tcggtatcgg tgtaacgccg
     8161 tgccggaaaa tgcgtttttg cgtatatgcc gaaaacgccg gttgtgtttt aatcaggtgt
     8221 tggtgtcgct gcatcgcttg agggaaatat tttttatagt ggattaacaa aaatcaggac
     8281 aaggcaacga agccgcagac agtacaaata tagtggatta acaaaaatca ggacaaggca
     8341 atgaagccgc agacagtaca gatagtacgg caaggcgagg caacgctgta ctggtttttg
     8401 ttaatccact atagtacgga accgattcac ttggtgcttc agcaccttag agaatcgttc
     8461 tctttgagct aaggcgaggc aacgctgtac tggtttttgt taatccacta tattcgggtt
     8521 ttatccggca ggacggtttt ttgccccaac ggaaaatagt cggcctgccc gtaaaatcag
     8581 ccgtttgtcc gggtgcagcc ggggctttgg gcttcagacg gcatattttc ggaatggcgg
     8641 cattcttgcc gtcggcgcgg cagccgtatg gggaagggag gggatattgt ggtcggtaac
     8701 ggcaaaaaat atgccgcacc attgctggtg ctgggttgcg tggtgttcgg tctgggcagt
     8761 ctgattgtca gatccgtccc cgtcggttcg tatgcaatcg cattttggcg gttgctgatt
     8821 tcggtgttcg tattttggtt tttagcacgg tttttcaggc aaaaattccc aaaaaacagg
     8881 aaaaccgtcc gatatgccct gacggcgggc gtgtttctcg ctttcgattt ggcgttgtgg
     8941 cacgaaagca tacacgcggt cgggccgggt atttccaccc tgctcaacag cctgcaaatc
     9001 tttttcttgt cggcaatcgg tgttttcttt ttcggcgagc gtttgagcgg gctgaaaaag
     9061 gcaggcttaa tatcggcagt tgccggcgtg gcgatgattg ccggtgcgga attcggctac
     9121 aacggtaatg cggtttgggg attcgtcagc ggtttggtat cgggactgat gctcgccctg
     9181 tcgatggtgt tcgtccgcaa aacccatgaa atcgagacgg tggcgctttt cccttcaatg
     9241 atgattttga gtttgggcgg cgcggtatcg ctggttgttc cggcattgct gatggatggc
     9301 ggcgcgcttt atccgacgac ttggaaagat gcgggtttgg tgcttgtgta cggcgtggtg
     9361 atgcagtgct tcgcgtgggc gatggttgcc tatgcgattc cgctgctttc gctgtcgctg
     9421 acggggctgc tgcttttgtc cgaaccggtt gccgccctgt tcatcgatta tttcgggttg
     9481 ggcaaaccga ttgaaggcgt gcagtgggca ggggtggcgc tgacgctttc ggcaatttac
     9541 ctcggttcgc tgaaacagca gtccgagcct tgactccgtc cggcatcaga ttttctgccg
     9601 tggcaaacct gcgtacgatt gaactggcag gcagtcaaaa ccggcaagac caaacacgcc
     9661 agcaacggcg cggagcggaa aatgccgtct gaagcccttt cagacggcat cggggcgggc
     9721 agaatcaaaa aagccgcctc cgctggaatg gcaatgcaac taaaataatg tccgtatttc
     9781 catatgccgc ccacaccgtc agtcggacga aatgcccttt attcaatggg atgggtttcc
     9841 acacaaacgg aaatatagtg gattaaattt aatccactat attatccccg aggctgccgg
     9901 cagggaaaca aggcgtttga tgataaaaat gccgtctgaa acagggttcg gatggcattt
     9961 ttgatgttcc ggcgtaattt tccggcctaa cggattgccg taccggccct gccgaaatcg
    10021 ccgaagttca tcaaaatgaa cattgccttg ccgacaacca gcttgtcatc cacaaatccc
    10081 cagtagcgcg aatcggcact gttgtcgcgg ttgtcgccca tagcgaaata gcgtccttcg
    10141 ggaactttgc acacgaaacc gctgccgtcg tcggcatatt ggcagtgttc caaaccgctt
    10201 tgctctatgg aatatccgtt ttcagacata atatcggagg tatatttgcc caatacgggc
    10261 agggaaacgg caggctgtcc ttcttttttc agaatattga aggatttgcc gtccaaaccg
    10321 ctgtggaaca tatccgtatt gtggatttcg gatgggtcgg tgtcgtcggg ataacggtat
    10381 gtgccgtcag gaatatcgga agcaggtttt ccgtttaccg tcaaaacttt attccgatat
    10441 tcgaccacat cgcccggaat gccgacaata cgcttgatgt aggtcatctc cggttgcaaa
    10501 ggataattaa aaacgaccac atcgccccgt tcgattttgc ctgtaggaat aaatatattg
    10561 tttaaaacgg gtacgcgcag gccgtaggaa aatttgccga ccaaaatgaa atcgccctta
    10621 atcaggcccg ggcgcatcga gctggacggg atttggaacg gttcggcaat aaacgaccgg
    10681 atgaggaaca ataccaaaac ggtagggaag aaactgccga aataatcgcc gaagtggctg
    10741 ctttccgaga tttcgggatg agtcttcagg cggtatttgt atacccccca agccgtaccg
    10801 cacaatacaa cgaaaatcag gaaaacggcg gtaaagctca taaacaggga caaagcggca
    10861 aacacgccga ccgccgtcag gatataggcg tattccagac cggaactcca ttcaccgttt
    10921 tcctgccgct ttttgtcgct tttgaaataa aggatgatgc cggcaagcag cgcggcagcc
    10981 gcgcccgaca ttagcattgt gttcattgtt gttccttaat gcttaaaaac ccgcctgtcc
    11041 gtgcaaccgt tttaaggcgg caaattgcaa aatttgtttg cgggcgcgtg cccctgaaat
    11101 cagggcggtt tgaggggtgt tcccgacgcg ccgccctgtg tgccagagtt atttgtcgct
    11161 cacctgcaaa atcgccaaga acgcgctttg cggaatttcc acattgccca cttgtttcat
    11221 acggcgttta cctgcctttt gtttttcaag cagttttttc ttacgcgtaa tatcgccgcc
    11281 gtaacatttc gccaaaacgt ttttacgcag ggctttgacg ttttcgcggg cgataatctg
    11341 gctgccgatg gcggcttgga cggcgatgtc gaacatttgg cgcggaatca gctcgcgcat
    11401 ttttgatgcc agctcgcggc ctcggtgaac cgcgctttga cggtgcacaa tcaggcttaa
    11461 tgcatcgact ttttcgccgt tgaccataat atccagctta atcaaatcag acggttggaa
    11521 ctctttgaaa tggtagtcca acgaagcata accgcgcgaa gtggatttga gtttgtcgaa
    11581 gaagtccatg acgacttcgt tcatgggcaa atcgtaagtc agcatgactt ggcggcccat
    11641 gtactgcata ttgacctgaa cgccgcgctt ttggttacac aaagtcatga cgttgccgac
    11701 gtattcctgc ggcacaagga tggtcgcggt aataatcggc tcgagtatgg tttcgatgct
    11761 gccgatgtcg ggcagtttgg acgggttttc aacttcgatt ttttcgccgc ttttcaacac
    11821 gacttcgtaa accaccgtcg gcgcggtggt aatcaaatcc atatcgaact cgcgctccaa
    11881 gcgttcctgc acgatttcca agtgcaacag acccaagaag ccgcaacgga agccgaagcc
    11941 caatgcctgg gaaacttcag gctcgaattt caacgaagcg tcgttaagct gcaatttttc
    12001 caaagcgtcg cgcaaggctt cgtagtcgtg gctttccacg ggataaagtc cggcgaatac
    12061 ttggctttgt acttcttgga agccgggcag cggctcagtg gcagggttgg caaccagtgt
    12121 aaccgtatcg ccgactttcg cctgacccaa ttcttttacg ccggtaatca aaaagcccac
    12181 ttcgccggct ttgagttctt gtttttgaac cgatttcggt gtgaatacgc ccaactgctc
    12241 aacctgcgtt tccgccttgg tgctcataaa gcgcactttg tctttcagtt tgatggtgcc
    12301 gtttttcact cgaatcagca tgaccacgcc gacgtagttg tcaaaccacg aatcgacaat
    12361 cacggcttgc agcggcgcgt tttcatcgcc ggtcggcgca ggaattttgg caacgatttc
    12421 ttccaaaacg tcttccacgc cgatgccgct tttggcggaa cactgcaccg cgccgaccgc
    12481 atcgatgccg atgatgtctt caatttcctg ctccacgcgt tcggggtcgg cggctggcag
    12541 gtcgattttg ttcaaaacag gcacaacctc cacgcccaaa tcaatcgcgg tgtaacagtt
    12601 cgctacggtt tgcgcttcca cgccctgcga cgcgtcaacg accaaaagcg cgccttcgca
    12661 agccgacagc gaacgggaaa cttcgtaaga gaagtcgacg tgtcccggcg tgtcaatcaa
    12721 attaagctga tacacctgcc cgtcgcgcgc tttatagttg agcgcggcgg tttgcgcttt
    12781 gatggtaatg ccgcgctctt tttcgatgtc catggaatcg agtacctgcg tactcatttc
    12841 gcgcaaatcc aaaccgccgc aatattggat gaagcggtcg gcaagcgtcg atttgccgtg
    12901 gtcgatgtgg gcaatgatgg agaaatttcg gatatttttc attagagttg ttttgaatgt
    12961 cggacagtgg gtttgggaaa tgccgtctga acaaacggcg ttgcgtccga atatcgggtg
    13021 caacgtggaa atagcccgat attctaacgg aaaaccgctg ttttggcatg atttgataaa
    13081 ggttttataa agatttgacg atttctgcca ccatttttgc agaacttgcc gccgccgttt
    13141 tcaaaaattc gtcaaagctg atgtctgcct tttcgtccgc cgaatcggaa accgcgcgga
    13201 tgatgacgaa aggcgtttcc aactgatgac aggtttgggc aatcgccgcc gcttccattt
    13261 ccactgcttt gactttgggg aagtgcttgc ggatttccgc cacgccttcg ctgctgtgga
    13321 cgaagcggtc gccgctgaca atcaggcctt gttctaccgc cgcgccttca aacacttccg
    13381 ccgcctgttt tgctttgccg accaagaggc cgtctgaaac aaatacggcg ggcagttgcg
    13441 gcacttgtcc ccaaacatag ccgaatgcgg ttacatcgac atcgtggtgc gcgatttctg
    13501 tgccgaccac gacatcgccg actttcaaac ccttgcccaa gccgcccgcg ctgccggtgt
    13561 tgataacgca gtccggtgcg aattgatgga taagccaagc cgttgcaacc gccgcgttga
    13621 ccttgccgat gccgctcaat gcaagcacca tgcgttttcc cgctaattcg ccttcatagg
    13681 cggcaaactt gccgaaagag acggctttga cattttccat catctcgcgc aaaagctcga
    13741 tttcttgttc cattgcgccg ataacggcta ctgttttcaa agacatattg ctgacctgtt
    13801 gtgaatttcg gatagaatgc ctgattatac acgctaacac ggcaggattg agtggaggtg
    13861 gtttgtccgt gccgtctgaa acggtttcag acggcacggc gggtttttgg tagaatggga
    13921 aggtacagat tgtttgaaga ttaggggacg aggatgttta ccgatgaaaa tatgaccgca
    13981 aaggaagaac tgttcgcatg gctgcgccat atgaacaaaa acaaaggttc cgacctgttt
    14041 gtgacgaccc atttcccgcc cgcaatgaag ctggacggca aaatcacccg catcacggac
    14101 gaaccgctga cggcggaaaa atgtatggaa atcgcctttt cgattatgag tgcgaagcag
    14161 gcggaagaat tttcatcgac caacgagtgc aacttcgcca tcagcctgcc ggacaccagc
    14221 cgcttccgcg tcaatgcgat gatacagcgc ggcgcgacgg cgttggtatt ccgtgcgatt
    14281 accagcaaga ttcccaagtt tgaaagcctg aacctgccgc cggtcttgaa ggatgtcgcg
    14341 ctgaaaaaac gcgggctggt tatttttgtc ggcggcaccg gctcgggcaa atcgacttcg
    14401 cttgcctcgc ttatcgatta ccgcaatgaa aattcgttcg gacatatcat caccatcgaa
    14461 gacccgatcg agtttgtcca cgaacacaaa aactgcatca tcacccagcg cgaggtcggc
    14521 gtggatacgg aaaactggat ggcggcgttg aaaaacacgc tgcgtcaggc gccggatgtc
    14581 atccttatcg gcgaaatccg cgaccgcgaa acgatggact acgccattgc ctttgccgaa
    14641 acggggcatt tgtgtatggc gacgctgcac gccaacagca ccaatcaggc actcgaccgc
    14701 atcatcaact ttttccccga ggagcggcgc gaacaattgc tgacggattt gtcgctcaac
    14761 cttcaggcgt ttatttcgca acgcctcgtt ccgcgagacg gcggcaaggg cagggtggcg
    14821 gcagtcgagg tgctgctcaa ttcgcccctg atttcggagt tgattcacaa cggcaacatc
    14881 catgaaatca aagaagtgat gaaaaaatcc actaccctgg gtatgcagac cttcgatcaa
    14941 cacctttacc aattgtatga aaaaggcgat atttccctgc aagaagcatt gaaaaatgcc
    15001 gattccgcac acgatttgcg tttggcggta cagttgcgca gccgccgcgc gcaaagttcc
    15061 agccccgatt tggaactgct ctgatggcgg tatggatttc cggacggatg gtttgaaatg
    15121 atttatccgt ggcataatga gcaatggcgg cagattgcgg aacattggga gcgtcgtccc
    15181 aatgcatggc tgtttgccgg caaaaaagat acggggaaaa ctacatttgc ccgctttgcg
    15241 gcgaaggcac tgttgtgcga aacccctgca ccgggctgca aaccctgtgg cgaatgtatg
    15301 tcctgccatc tgtttggaca gggaagccat cccgattttt acgaaatcac ccccttgtcg
    15361 gacgaacccg aaaacggacg caaactgttg cagatcaaaa tcgatgccgt cagggaaatc
    15421 atcgataatg tgtacctgac ttcggtacgg ggcggtttgc gcgtgattct gattcatcct
    15481 gcggaaagta tgaatgtcca agccgccaac agtttgttga aagtgttgga agaaccgccg
    15541 ccacaagtgg tctttttgct ggtcagccac gcggcggaca aggttttacc gaccattaaa
    15601 agtcgctgcc ggaagatggt tttgcccgct ccttcgcatg gggaagcatt ggcatatctg
    15661 cgcgacaggg gtgtggcgga gccggaagaa tttttggcgt tccattcggg tgcgccgctg
    15721 tttgatgagg cggacggtgt ccgtgcgttg cggattaaac tgttggatat tttggcagaa
    15781 ccaaggttgt tgaagatttt ggattacgcc gcacttttcg ataaggaaaa acttccgctc
    15841 gccgtatttg tcgggtggat gcagaaatgg ctggtcgatt tgggattgtg cctgcaacac
    15901 atgaaacccg tctattatcc cgcttatgaa gacaggctgc ttcagacggt atccggtttc
    15961 cgtccgcgca atgtatttgc ggcggaggat atgctcaaac agcttgcccc ctacgggttt
    16021 catactttaa atgtcaaaat gcagatcgag catctgctca tcaactattt ggaattgaag
    16081 aaagagaacg ggtgaattat gtcagacgga caaaatattc cggcaaaaat gatgtcgttg
    16141 cagctgaaag acatgaatct gctgtacagc tcctacatgc cgtttttgga acacggcggt
    16201 ctgtttgtgc agaccaacga cgtattttcc atcggggacg atattctgct tgccgtagaa
    16261 atcctcaact tccccaaact gttcctgccg accaaagtcg cctggatcaa tcctgcgcgt
    16321 acttcctcca aacccaaagg ggtggggctg gcattcacaa aacacgaaaa ctgcctgaaa
    16381 gtcaaagacc agatcgaagt cgaactgggc aacacaatcg gcggcagcag acctacgttt
    16441 accatgtaac gccatgcata tcatcgattc gcactgccac ctcaattttg aaggtttgaa
    16501 agaacgcctg cccgaagttt tgtccaacat ggaagcaaac ggcgtggggc aggcgctcgc
    16561 catcagcgtc agtagggaaa gcttctccga agtctttgcc atcgccgaag cgcacgaaca
    16621 catctattgc accataggcg tacatcccga cagcaaggaa gccgaagaat tttctattgc
    16681 ggaaatggtt gccgcagccg cctcgccgaa agtggtcggc attggcgaga cgggtttgga
    16741 ttattactgg tgcaaaggcg atttgtcctg gcagcacaaa cgctttgcag accacatcga
    16801 agcagccaat caaaccggac tgcccgttat cgtccatacg cgtgatgcgg cggcggacac
    16861 cttgtctatc ctgaaagaat gccgggttaa ttcgggcgtt atccactgtt tttccgaaga
    16921 catcggtttt gcccgtgcag caatggattt ggggctttac atttctttct cgggaatcgt
    16981 tacctttaaa aacgccccct tggttcagga ggcggcaaaa tacgttccgg acgaccgcat
    17041 tttggtggaa accgatgcgc cattcctcgc ccccgttccc aaacgcggca ggcagaacga
    17101 accggctttt gtgcgccata ccgccgaaca tatcgccaaa ttgcggaacc aaacattgga
    17161 acaggttgcg gcatatacga cggaaaactt ttaccggctg tttaaaaaag tacccgatat
    17221 gcggcccgtc tgaccctgta ccgacgataa ggaaaaccat gaaggcaatt catccgtatg
    17281 catgtccgcg ctgctgccgg ctgcctgcca acacgtttcg gacaggcatg aggcagtcgg
    17341 tatggtgaag tccgcttcca aattctgcat tgccaaaggc ggcggatggg aagcaaaaaa
    17401 agacgaaagc ggcggcggat atgccctgtg tcatttgccg gacagcagga ttgtcgagga
    17461 gtgggaatat ttccgttcac aacattgata ctgcgcgata tacggcaaat attgtgggaa
    17521 gtttccgctt ttgcgtataa tgcgccctac ctgacaaatt ttgtcaactt tatcaaaagg
    17581 aataagcgat ggcttccatc cacgaccaaa ttaaagaagt agtaacgaca caccgcgtcg
    17641 tattgtttat gaaaggtacg aagcagtttc cgcaatgcgg tttctcttcc cgcgccgtgc
    17701 aaatcctgaa cgcggcaggc tgcaccgatt acgttaccgt caacgtattg gaaaatcccg
    17761 aagtacgcca aggcattaag gaatacagcg actggccgac catcccccaa ctttatgtga
    17821 acggcgagtt tgtcggcggc tcggacattt tggcagagat gtatgaggca ggcgagttgc
    17881 aggatctgct caaagcctga ttcggccgct catgccgtct gaacgtgttt cagacggcat
    17941 tttcttttcc ggcaaatcaa aaaaaagtat aatggcgcgt ctcaaaatca cactggaaca
    18001 ccgcgatgaa cgttaatgtt atcaaccatc cgctcgtccg ccacaaatta accctgatga
    18061 gggaggcgga ttgcagcacc tacaaattcc ggacgcttgc catcgagctg gcgcgcctga
    18121 tggcatacga ggcaagccgt gattttgaaa tcgaaaaata ccttatcgac ggatggtgcg
    18181 gtcagatcga aggcgatcgc atcaagggca aaacattgac cgtcgttccc atcctgcgtg
    18241 caggtttggg tatgcttgac ggcgtactcg acctgattcc gactgccaaa atcagcgtgg
    18301 tcggcctgca gcgcgacgag gaaacgttga aacccgtttc ctattttgag aaattcgtgg
    18361 acagtatgga cgaacgtccg gctttgatta tcgatcctat gctggcgaca ggcggttcga
    18421 tggtggcaac cattgacctg ttgaaagaaa aaggctgccg caacatcaaa gccttagttt
    18481 tggttgccgc acccgagggc gtgaaggctg ttaatgacgc gcatcccgac gttacgattt
    18541 acaccgccgc gctcgacagc cacttgaacg agaacggcta catcatcccc ggcttgggcg
    18601 atgcgggcga caagattttc ggcacgcgct aactgactga ttttcggatt tgatatgaat
    18661 ttccaagact atctcgccac atttccttca atcgaccatc tgggcggttt ggacgttcag
    18721 gatgccgacg gcaaaacggt tcaccacatt cccgccgttc agggtaaact cggttcgctc
    18781 aagctgtaca atgctttggc agaacgtttt gacggaaaat tggacaaaga agcggcagaa
    18841 cagggtttga tatggtttgc cgaacacgtt gccgacgcgc gcgcccatcc cggcaagcat
    18901 cccaatatcg acctgcttga aaaagttgtg caaagcggcg aaaccttgct gctcaagccg
    18961 cttgccgcgc aataattttc gaccatgccg tctgaaatcc gtttcagacg gcattttgtc
    19021 ggaaagaaga ccgtaaaacg ggcattttct tttctatttc aggatacggg caatgatgtt
    19081 tcaacacaca ggacgacaca tatagtggat taacaaaaat caggacaagg cgacgaagcc
    19141 gcagacaata caaatagtac ggaaccgatt cacttggtgc ttcagcacct tagagaatcg
    19201 ttctctttga gctaaggcga ggcaacgccg tactggtttt tgttaatcca ctataaagcg
    19261 ccgccctatg tgttgcccta atttggaagg ggttaccccc ctctcaaata aaatctgatg
    19321 ctgctgccac gaaggacgga tgtccaaatg gcggagtttc aaccattaag gaaatacgat
    19381 gaaaaaaatg ttcctttctg ctgtattgct tctgtcggct gcgacccgaa ccgtgtgggc
    19441 ggatacggta ttttcctgta aaacggacaa caacaaatat atagaagttc aaaaaatcaa
    19501 ccgcaatctt tacgaatatt cgttcggcag tgcggcaaaa aaagaaattg ccatacgcaa
    19561 cagcaaagct gacctgtcgg ggcgttccga caggtggcaa ggcatgggca gcggacgccg
    19621 ggcaacgatg aaattccaaa acggcgaatt tatgtacacc gtatggacgg gcttcgattc
    19681 cgtgactcat acggaaagca gcggtgtcgt tgtggagcgt aagggcaagg aagtcgcacg
    19741 ggtcggctgt acgccgcaaa ccgcgcaggc gaatttcaac gatgctgatt tttcccggta
    19801 atcggggcgg ataaggcgat ggaaacagtg aaccccatca tgctgattgt ccgaccgtcg
    19861 ggcagggcga aggacgatgt ggaaacctgc cgtcgtgccg gatggcaggc ggaagtgttg
    19921 agcccgattg aaatcgaagc agatgctgcc ggactggaac ttttgtccga acaatatgcc
    19981 cgtgcggatg ccgtgttttg ggtcagtccg accgccgttg aaaccgccgt cccgtacctt
    20041 aacctttcag acggcataaa gatgcacatt tccgtagggc agggcagccg ccgcgcattg
    20101 gaacgctgtt tggtcagaac ggtcatcgcg cctgatgacg gcaacgacag cgaggcggtt
    20161 ttgcgcctgc cggtttggaa cagtctgccc gaaggtgcgc gcgtattgtt tgtgcgcgga
    20221 cacggcgggc gggatttttt gatgaatgcc ttgcaggaga aaggttttcg gacggaggtg
    20281 gcagaagtct atttcagacg gcataaacct ttgaactttc aaaatttcca aaccgaaaat
    20341 attgccgccg cctatattac gtcgaccgag ctggtgcgct tgctgttcgg gcagcttccg
    20401 ccgcaatttt cccgattctt caaatccttg ctatacttta cccatcatcc gcgcattgcg
    20461 gaggcattga agcgcgaagg cgtgtgttcg gtcgaaaccg tccctacgct ggaagccgcg
    20521 ctttcccatt cttccatttc cgtttcagac ggcatggtct ttcccggaac ctcaaattaa
    20581 taaggagcaa aacggtgggc gaacctgaaa acaaatcatc cgaacccgta cgcgagatac
    20641 aggcatcaaa agaaatgccg tctgaaacct cttccccacg caaagaaaac gaaacagaag
    20701 tacacattcc tgccgctcct tttatcgtca aacagtccgg cagcaacgct ttggcagtct
    20761 gcgccctggt attggcggca ttgggtttgg gtacaagtgg ttttttgttt gtccaaggac
    20821 agaatgtctt gaaaaaccaa gagctggcat tcaaccaaaa aatcgacaaa gccgctttgg
    20881 gcgagtcgga aaacgccgcc ctgctcaaag acaacctcaa ccggcaagcc gccatacaat
    20941 cagagctcga ccgtttggac ggaaacgtca aagcaaacgg cgaacaaatc ttggaaatgc
    21001 aaaaatccta tcgcgagttg accaaaggac gcgccgattg gctggtggac gaaaccgaga
    21061 ccatactcaa tctggcggcg caacagctgg tgttgactgg caatatccaa acggcagtcg
    21121 gcgtattgga gcatatcgac agccgcctgt cccgtttcaa tcaggcagag cttctgccga
    21181 tcaagcaggc ggtcagcagc gacttggcgg aactgaaaaa ccgtccctat gtcgatattt
    21241 ccggcacggc attgcgcctc gacaggctgg aaatcgccgt atccggactg ccgctgattt
    21301 tggacggcgt attgaaaccg agcgtacagg cacgcaacga agccgtttcc gcttcatggt
    21361 ggcagaacgt atgggaaaaa tccctcggca cattgaaggg gctggtcgaa atccgccgtt
    21421 tggaaaacaa cgatgccatg ctgatttctc ccgaacaggc ctattttgtg cgtgaaaacc
    21481 tgcgtctccg ccttttggat gcgcggactg cattaatgca gcgcaacagc gaagtctatc
    21541 agggcgattt gaacaatgcc gaaaccgccg tcagacagta ttttgatgcc aaatcccccg
    21601 ccacgcagtc gtggttgaag gaattggcgg aattgaaggc gttggatgtg cgcatgacgg
    21661 cggatgacgg tttgaaaaac agcctaaatg ccgtccgcgc ctatcgcgac ggtacgcgca
    21721 tgacgacggc ggaaaatcaa gaagcggaac aggcgacttc cgaaccggca aacgaaaaca
    21781 cagcttccga accggctgcc gcatcggatg tgaagaccat agaagcaccg tccctgcctt
    21841 cggaacgcaa accggaacag cctgcaaaaa aacagcccgt accggaaaag gcagggcgtt
    21901 cgccgtccgc taaaggagaa cgcgcatgaa aacggtagtc tggattgtcg tcctgtttgc
    21961 cgccgccgtc ggactggcac tggcttcggg catttacacc ggcgacgtgt atatcgtact
    22021 cggacagacc atgctcagaa tcaacctgca cgcctttgtg ttaggttcgc tgattgccgt
    22081 cgtggtgtgg tatttcctgt tcaaattcat tatcggcgta ttcaatatcc ccgaaaagat
    22141 gcagcgtttc ggttcggcgc gtaaaggccg caaggccgcg cttgccttga acaaggcggg
    22201 tttggcgtat tttgaagggc gttttgaaaa ggcggaacta gaagcctcac gcgtgttggt
    22261 caacaaagag gccggagaca accggacttt ggcattgatg ttgggcgcac atgccgccgg
    22321 gcagatggaa aacatcgagc tgcgcgaccg ttatcttgcg gaaatcgcca aactgccgga
    22381 aaagcagcag ctttcccgtt atcttttgtt ggcggaatcg gcgttgaacc ggcgcgatta
    22441 cgaagcggcg gaagccaatc ttcatgcggc ggcgaagatg aatgccaacc ttacgcgcct
    22501 cgtgcgtctg caacttcgtt acgctttcga caggggcgac gcgttgcagg ttctggcaaa
    22561 aaccgaaaaa ctttccaagg cgggcgcgtt gggcaaatcg gaaatggaac ggtatcaaaa
    22621 ttgggcatac cgccgccagc tggcggatgc tgccgatgcc gccgctttga aaacctgcct
    22681 gaagcggatt cccgacagcc tcaaaaacgg ggaattgagc gtatcggttg cggaaaagta
    22741 cgaacgtttg ggactgtatg ccgatgcggt caaatgggtc aaacagcatt atccgcacaa
    22801 ccgccgcccc gagcttttgg aagcctttgt cgaaagcgtg cgctttttgg gcgaacgcga
    22861 tcagcagaaa gccatcgatt ttgccgatgc ttggctgaaa gaacagcccg ataacgcgct
    22921 tctgctgatg tatctcggtc ggctcgccta cggccgcaaa ctttggggca aggcaaaagg
    22981 ctaccttgaa gcgagcattg cattaaagcc gagtatttcc gcgcgtttgg ttttggcaaa
    23041 ggtttttgac gaaaccggag aaccgcagaa ggcggaggcg cagcgcaact tggttttggc
    23101 aagcgttgcc gaggaaaacc gaccttccgc cgaaacctgt tgaaaccttc agacggcatc
    23161 gttgaaatgc cgtctgaaaa ccatttcact tgacaaacag actgacagaa aacccgtatg
    23221 actcttttaa aaaacgatac cttcctccgc gccctgctta aacagcccgt cgaatacacg
    23281 ccgatttgga tgatgcgtca ggcggggcgt tatctgcccg aatacaaagc cacacgcgcg
    23341 aaagcgggca gcttcctcga tttgtgcaaa aacaccgaat tggcgaccga agttaccatc
    23401 caacctttgg aacgtttcga tttggacgcg gcgattttgt tttccgacat cctgaccgtc
    23461 cctgacgcaa tgggcttggg actgtatttt gccgaaggcg aaggcccgaa attcaaacgc
    23521 gccctgcaac acgaggacga cattgccaaa ttgcacgtcc ccgatatgga aaaactgcaa
    23581 tacgtctttg atgccgtcag ctccatccgt aaagcactgg acggccgcgt accgcttatc
    23641 ggcttctccg gcagcccgtt cacacttgcc tgctacatgg ttgaaggtgg cagcagcaaa
    23701 gaattccgca ccatcaaaac catgatgtac tcgcgccccg atttgctgca caaaatcctc
    23761 gataccaatg ctcaagccgt taccgcctat ctcaacgccc aaatcgacgc gggcgcgcag
    23821 gctgtgcaga ttttcgacac ttggggcggc gtcttgagcg atgaggcgtt taaagaattc
    23881 agcctcaaat acatccgcca gatcgtcgcc ggactcaaac gcgaaagcga aggcagacgc
    23941 gtgcctgtta tcgtatttgc caaaggcggc gggctgtggc tggaaagcat ggcagaaatt
    24001 ggcgcagacg cattgggctt ggactggacg tgcaacatag gcgaagcacg ccgccgcgtc
    24061 ggcaagcaag tcgccctgca aggcaacttc gacccgttcg ccctcttcgg tacgccggaa
    24121 tccatccgca ccgaggtcgc acgcatccta gccgactacg gacaaggcag cggccatgtc
    24181 ttcaacctcg gacacggcat caaccaacac gccgaccccg aacacgccaa aatcttagtc
    24241 gacaccgtac acgagctgtc gcggcagtat cacggcgggt aagccggcag gaaactgccc
    24301 gatatgccgt ttgaagccga gagatggccg gttagggtaa aaataaggca atgcggcaat
    24361 atccgccgtg tacggatagt acatgacggc ggcggtgttg ccgtattggc gcaatcccaa
    24421 ccgtccctat tttcagacgg catttttgtt ttcagatgta gggaaaaccg atggcaaaaa
    24481 cgcttaaaac cctttaccaa tgcaccgaat gcggcggcac ttccccgaaa tggcagggca
    24541 aatgcccgca ttgcggcgag tggaacacac ttcaggaaag cttggccgcg cccgagccga
    24601 aaaacgcccg cttccaatct tgggcggcgg atacctcgac cgtccaatcc ctctcctccg
    24661 tgaccgccac cgaagtgccg cgcaatccga ccggcatggg cgaactcgac cgcgtattgg
    24721 gcggcggttt ggtcgatggt gcggtcatcc tgctcggcgg cgaccccggc atcggcaaat
    24781 ctacgctgct gctgcaaacc atcgccaaaa tggcgcaaag ccgtaaagtg ctatacgttt
    24841 ccggcgaaga atccgcccaa caggtcgccc tgcgcgcgca gcgtttggaa ctgcccaccg
    24901 aaggcgtgaa cctgcttgcc gaaatccgca tggaagcgat tcaagcagcg ttgaaacagc
    24961 atcagcccga agtcgtggtt atcgattcca tccaaaccat gtattccgac caaatcactt
    25021 ccgcccccgg ttctgtgtcg caggtgcgcg agtgtgccgc ccaactgacg cgcatggcga
    25081 aacagatggg catcgccatg atactggtcg gacacgtgac caaagacggc gcgattgccg
    25141 gcccgcgcgt gctggaacac atggttgata ccgtgctgta tttcgagggc gaccaacatt
    25201 ccaactaccg catgatacgc gccatcaaaa accgcttcgg cgcggcaaac gaactgggcg
    25261 tgttcgcgat gacggaaaac ggtttgaaag gtgtgtccaa cccgtccgcc atcttccttg
    25321 ccagctaccg cgacgacacg cccggttcgt gcgttttggt tacgcaggaa ggcagccgac
    25381 cgcttttggt tgaaattcag gcattggtcg atgacgcgca cggattcacc cccaaacgcc
    25441 ttaccgtcgg actggaacaa aaccgcctcg cgatgctgct cgccgtgtta aaccgacacg
    25501 gcggcatcgc ctgtttcgat caggatgtgt tcctcaacgc cgtcggtggc gtgaaaatcg
    25561 gcgaaccggc ggcggatttg gcagtcatcc tcgcgatgct ttccagcttc cgcaaccgcc
    25621 cgctgcccga aaaaatggtt gcatttggag aaatcggttt gagcggtgaa gtccgccccg
    25681 tcgcgcgcgg acaagagcgg ctcaaagaag cggaaaaact cggcttcaaa cgcgccatcg
    25741 tccccaaagc caatatgccg cgcaacgcca aagagtttcc gaacctgaaa atctacggcg
    25801 tttcgagttt gcaggaagcc attgatattt gtcgggaaga tagggattga aaggaaatgc
    25861 cgtctgaaat cgggtttcag acggcatttg atttccatcc gccatatgtc ggcgacgggc
    25921 ttattcgcct acggtttttt gtatcagttt ttcggcgttt gccaaagtgt ttgccacttc
    25981 gtcaaaaccg atgcggctgc cggcgatgag ggcgcgcgta tcggtatagg cggcgcgtac
    26041 tttgccgtct gtttcggtaa cgaggacgcg caggggcagt tgcagggcga aggcggggtc
    26101 tttgaccatc agcggcgtgc cggctttggg cgtgccgaag acgatgactt tggccggctg
    26161 catcgttaag ccgtttcggc gggcggcttc ctgatggtcg atgacggcaa aaatgttcat
    26221 ccctttgctt tttatggcgg tttcaaggcg gctgacggtt tcgtcaaagc tgtatttcga
    26281 ggtgagggta tgcgtggtca tagcggtttc gttttgggtg ggcggtttgc cggcagggtg
    26341 tgccgaagcg gttgaaatgc agagtgcgga tgcggcaatc agggggagta tgtgtttcat
    26401 cgtatttcct ttttcctttt tggttgaaac ggtagaatca gactttattc gggaggggtg
    26461 taaccctttc caaatcaggg caacacatag ggcggtgctt tatgtgtcgt gaaacatcat
    26521 tgttccttat cggtttgttt atcaggcttc ggacggggcg gcgcgcgccg cgcccgatgt
    26581 tgcgccgcgt gccggaacgc cgtatgccgt ctgaaagcct gtcctttcag acggcattgc
    26641 gtcatttcat cccttttttg agcaggtctt cataaccgcc gtgattggca acatttgtat
    26701 aacctgcttt tttcagctct tgaagggcgg cttcggcacg ccgtccgctg cggcagtaga
    26761 ggttgaccgg cgtgtctttg tcgggcgcgg cttcgtgtat gcggcggacg atttggtcga
    26821 cggggatgtt gaccgcgttg tgcaaatgcc cttcgctaaa ttcctgttcg gaacggacat
    26881 cgatccaaac ggccggatgt tgcgcggttt gggcggcgga tacgggtttt tgcggggctg
    26941 cctgcgcggc aaaggcggct gaggcaatga gtgcggcggt aatcaggtgt ttgatattca
    27001 tagggttttc ctgcggttgt tgtccgaaag gacgggaagt tattttatct gttccaaagc
    27061 ggcggcatct atgtcccaac gccaaacgcc gccgcctttg ccatccaatc cgcgcaaaaa
    27121 caggtagcgg acggaaacgg cggcgggcgg ttgtccgcgc agcttgaagt agcgtgcggc
    27181 ggcaacggcg taaatcagtg cctgaaggta atagtggtgg tgtgcgacgg cttcgtccat
    27241 tgcctgttgc gtgtaggcgg atgcgtccgt accgaggtgg tttgatttgt agtcgatgac
    27301 gcagatattg ccgtcggggt cttggcagac catatcgaca aagccgttta aaaagccgtt
    27361 gacggtgtgg aagtcgagcg tttcggcagc ggcacggcag acttcgggca gcctgatgtc
    27421 gtcgcgggca aaccagtcgc gcaggcgttt gaggctgaag tcttcggtgt ggagggtaaa
    27481 gcccatttcg ggacagcggc actcgggtga gatgtcggac aggtcgtatg cccccgtcag
    27541 cggcgttttg cggcaggctt ccgccatttc ggcaacggcg ggcagccata tttcttcaaa
    27601 accgtatttt ttcagcttgt cggcaatgag ggtttcctgt ccggcggctg cttgtccgaa
    27661 tttgaaatct tcaagaattt cgtgcaggca cagccccgcc tgcgtgcctt tcggaaaatc
    27721 gtgtatcgat atgccgtctg aagccgtcgg cgtttcagac ggcatcgccg gcaccgaggt
    27781 ttcggcggca tccaaggacg ggcaggcatc ttcttcgccg ccgtcgggcg tttgggtatg
    27841 gcggcttaag gcggtaaagc tagtgtggcg gacaaatcgg aatccgcgtt cgggaatgct
    27901 gtttgcggca aattcggcgg tttgaccggc gttgctgcga taggcggcag ggggcggcgc
    27961 attttcggtg aaggcgaaat ttgtgccgga aggggcgttg tccgccacgc gccgccagtt
    28021 gcgtttgagc atcgcgatgc cgtctttttc acacgcatag gcacggcgga cggtttcacg
    28081 gctgtcttgg ggcgagcctt caatcaggta ggcgaggggg ttgtcggcag tattggtgga
    28141 gtacgcggcg tagatgttga gctgttcctc ggcacgcgtc agtgcgacat aaagcaggcg
    28201 caggcgttcc gccatttctt catcggcgta ttgtttctgt tcgtcttccg acagttgcgc
    28261 ctttgccaac agttcggttc ggtttgcgct ttggtggagg atttgccagt cggacggccc
    28321 ggtatcttgc gcgtcccacg caaacgggca gtacaccagc ggatactgca aacctttcga
    28381 ggcgtgcatg gtaacgattt tgaccaaatc ttcgtcgctt tccagacgga tggcgcggtt
    28441 gtcgccgctg ttgttgccgg ccaggctgat ttggtcgcgc aaccatttgt gcagcgcggc
    28501 tgggttgcgg ttttgcgcgt cttcggcggc aagcagttcg agcagttgga aatagttggt
    28561 caggctgcgc ccgttgttcc ggcttaagag gcgcgtttcg atgccgtgtg tttgggaaaa
    28621 ttgctgcata gcggcgaaaa tgccgtattg attccagttg tcgagtgcgg ttcgggcaga
    28681 ttccgcccaa tgcaaaatct cgctttcgtt ttggttgaag tcgtgcaatt gctgcgcgtc
    28741 ataaccgaat atgccgcttg tcaggacaaa gcgcagcgtt ccggcgcggc gcggttcgag
    28801 ccagaagccg atgagtgcgg acagggcggc ggcttcgggc gaggcgaaca cagattcgcg
    28861 cgaaagcagg acgctttgca cctgccgttt tttcagggcg gcggaaacca tcaccgcctc
    28921 gttgtgcgtg cgtaccagca cggcaatatc gcccgactgc aacgggcagc ctttgaaatt
    28981 cagacggcct ccggcggctt cgttgagcgc gtgggcgatt tcgtcggcgc aatagtcggc
    29041 ggcacggcgg cgcaaaacgt ctttgttggc tttttcattg tcgttttcgt gcagccaacg
    29101 aacctgtacg gcaggacgtt cgggggacaa cctgctttcg gcacgcgccg caccgacttc
    29161 cgaatagccg atgttttcca aaacgaacgg gcgttctttg aggcggaaca gcgcgcctat
    29221 gctgccgata agcgcggcgt ggctgcggta gttggtggcg agcgtgtagc ggtgccgcgc
    29281 gtctccggcg gcttgcaggt aggcgtaaat gtccgctccg cgaaagctgt aaatcgcctg
    29341 tttgggatcg ccgacgagaa acagtgggcg gttttgggca atgaaaatct tttggaagat
    29401 ttcatattgc agcgggtcgg tgtcttggaa ctcgtcgatc agcgcggttt cccagttttc
    29461 ggcaacggcg cgggcgaggg tttcggcgtg cggattgtcg gtcagcgcgg tgtggacatc
    29521 gagcagcagg tcgtcgaaac cgcgttcgcg gcgcgatttt ttcatctcgg caaggctgcg
    29581 gttgaggtat ccgattaaat ccagttgcag ccggatcatt gttgcttctt ccgcttcttc
    29641 gagtgcgttc aaatcgcgcc cgaagtctgc cagtttctgc aattcggcaa atgctgccgc
    29701 atcgggcgtt ttgccttttt taagggcggc ttcgagtttg tcggacgcaa gtttcaagag
    29761 tctgtcgtgc gtgtctttgt ccagaaaggg cagttgtccg gcggcggatt tttgtgccag
    29821 ttctttaaaa aggttgccga agctgttttt gcggtaactg ttgccgttga ggtcgggatg
    29881 gatgcgccaa aagccggctt ccagctcggg cagcaggcgg cagatggttt gccatgaggt
    29941 ttcggcgttg cgctgcgcct gtttcaaatc cgcctgcgga cggcggaaat tcaggtacgg
    30001 gcgggaaaga tagcgcgaaa tttgggcaag gacggtttgc ggcacagctt tgcgtttaaa
    30061 cgccaatgcg gcaagcaccg gatcattgct gacgcgttcc cgccaaaaat cttgcgccgg
    30121 gataagcagg cggtcgccgt cttcttcggt cagttcgaca tcgaacggtg cttggcacaa
    30181 gaaggcgtag tcgcgcagga tacgttggca gaagccgtgg atggtataga tggcggcgtt
    30241 gtcgaattgc ccgatggcgg ccttgaggcg gacaatcaga cgcgtccggc cctctttttg
    30301 caaagcctgt tttaagagtg cgggcaggaa ggtgtcgcct ttgtggtgtt cggcgcagta
    30361 ggcggcgatg ccgtctgaaa gcgtgtcgtc tccaagtttg gcaatttctt tactttctaa
    30421 aacctgcaac acatcgtcca aacgtgcgcg caggcgtgtt ttcaactcgg cggtggcggc
    30481 tttggtgaag gtaacgacca atacgcgctc gacgtttttt tgttccaata cgatcaggcg
    30541 cgtaaacagg gcggcgatgc cgtaggtttt gccggtgccg gcagaggcct caatcaggtt
    30601 ggtgccggca atggggacgg tcagcgggtc aaatgcttgg atgggtgcag acatagtgcg
    30661 cgctcggaaa acggttggac ggtaaaacgg gaaaatgccg tctgaaaaag ggtttcagac
    30721 ggcatcgtct ggcttagagg ttttgcaggc gttcgacaga cggcgcgtag tagtatccgc
    30781 ccgaaacggc ggcggagagg tgccggagca gcaggtcggt tttgccatcc gtgtcgccga
    30841 acatactcaa taattgcgct tcgatattgt gcagcgtgcg gcagtatgcg gtaaacatca
    30901 aaccgtgttc gccgctgatt ttgccgaagg gcaggctgcg gcggacgatt ttcaggccga
    30961 ctccgttttc tttcaggttg acgcggccga ggtgcgaatc gggcaggcgg acatcgcggc
    31021 cgaattcgtc gtcggtttcc ttgccgcgtc cgaccgaggc ctcctgttcg gcgacgggga
    31081 cggcatccca ttttttcaaa tcgtgcaggt atttttgcag caggacatag ctgccgcccg
    31141 catcgggttt tccttcgggg atgatggcga cttcgcggac attttcatcg ccctgcgggt
    31201 tttccgtgcc gtcgacgaaa ccgtccagtc cgcgatcctg atacaggcgc aaaccgtgtt
    31261 cttcggacgc gacgcatatg ctgtcgccga acgcgcctaa aacggattgg gcaagcgcgt
    31321 aggcggcgtt ttggcggaag gattggatgt ggatggacat atcgtgctgc gtggacggcg
    31381 caagcccgtt gcccatttcg gagaagggtt tgatttcact gccttcgtcc gtatgtccga
    31441 atgttgccca ggctttgctg ccgaaggcga tggtcagacc caaaatatcg tccggaaagc
    31501 gggctttcaa ggcagttaac gcgtcgagcg aagcgcggca ggcggcttta atatcgttga
    31561 ggcggttggc ggcgaagtcg gcttcgataa agatgccggc ttgggcgtgg tcgggaatga
    31621 tggcggattg gggcgtgttc atgagatgtt cctttttggt gtcatctgtt tcggatggat
    31681 tatagcaccg aatcggcagg cggatttttg ccggaacggc gtgcgtgaat ccgccgtttg
    31741 catacctgat gccgcttttc ggtttcgtgc cgcccaccgc ctttcccgcc ccctttattt
    31801 ccgcttccgg cggcttcggc atatcttttc cattccgatt tggaataacc atataaaaaa
    31861 aggattcttt gtgtttgccg caatttcact tagaatgccg cacttgcaca ctttttacag
    31921 gagaggatga tgttgaaaaa attcgtactc ggcggtattg ccgcattggt tttggcggcc
    31981 tgcggcggtt cggaaggcgg cagcggagca tcttccgcgc ctgcacaatc ggcagtttcc
    32041 ggttctttaa tcgagcgcat caacaataaa ggcacggtta ccgtcggcac ggaaggcact
    32101 tacgcaccgt ttacctacca cgacaaggac ggcaaactga ccggttacga tgtggaagta
    32161 acccgcgccg tggcggaaaa actgggcgtg aaagtcgagt ttaaagaaac gcaatgggat
    32221 tcgatgatgg cgggtttgaa ggcggggcgt ttcgacgtgg tggcaaacca agtcggtctg
    32281 accagccccg aacgccaagc gacattcgac aaatccgatc cttacagctg gagcggtgcc
    32341 gtattggttg cccgtaacga cagcaacatc aaatctatcg acgacatcaa aggcgtgaaa
    32401 accgcacaat ccctgaccag caactacggc gaaaaagcca aagctgcagg cgcagatttg
    32461 gtggcagtgg acggtttggc gcaatcgctg accctgattg aacaaaaacg tgccgatgca
    32521 accctgaacg acgaattggc ggttttggac tatctgaaga aaaacccgaa tgcgggcgtg
    32581 aaaatcgttt ggtccgcacc tgccgatgaa aaagtcggtt ccggcctgat tgtcaacaag
    32641 ggcaatgacg aagccgtggc gaaattcagt acggcaatca acgagctgaa agccgacggt
    32701 acgctgaaaa aactgggcga acaattcttc ggaaaagaca tcagtgttca ataatttcct
    32761 tgcttcgctg ccgtttatga cggaaacacg cgccgatatg attgtcagcg cgtttttgcc
    32821 tatggtcaaa gccggcttcg cggtgtctct gcctttggcg gcagcttctt tcgttatcgg
    32881 tatggttatt gccgtagccg tggctttggt gcggattatg cccgccggcg gcattgcgcg
    32941 gaaaatcctg ctgaaattgg tggaatttta tatttccgtc attcgcggta cgccgctgtt
    33001 ggtgcagctt gtgattgtgt tttacgggct gccgtccgtc ggtatctata tcgatccgat
    33061 tcccgccgcc attatcggct tctcgctcaa tgtcggtgca tacgcttccg aaaccatacg
    33121 cgcggcaatt ttgtccgtac ctaaaggcca atgggaagca ggtttctcca tcggtatgac
    33181 ctatatgcag acgttccgcc gcatcgtcgc gccgcaggca ttccgcgttg ccgtgccgcc
    33241 tttgagcaac gagtttatcg gcttgttcaa aaacacctcg ctcgcagcgg tggtaacggt
    33301 aactgaattg ttccgcgtcg cgcaggaaac ggcaaaccgc acttacgact ttttgcccgt
    33361 ctatattgaa gccgcattgg tttactggtg tttctgcaag gttctgttcc tgattcaggc
    33421 acgtttggaa aaacgtttcg accgttatgt cgccaaataa ggagttgtta tgattaaaat
    33481 ccgcaatatc cataagacct tcggcgaaaa cactattttg cgcggcatcg atttggatgt
    33541 gggcaaaggg caggtggtcg ttatcctcgg gccttccggc tcaggcaaaa cgacgtttct
    33601 gcgatgccta aacgcgttgg aaatgcccga agacggacaa atcgagttcg acaacgagcg
    33661 accgctgaaa atcgattttt ctaaaaaacc aagcaaacac gatattttgg cactgcgccg
    33721 caaatcaggc atggtgtttc aacaatacaa cctctttccg cacaaaaccg ccttggaaaa
    33781 cgtaatggaa ggaccggttg ccgtacaggg caagcctgcc gcccaagcgc gcgaagaggc
    33841 tctgaaactg ctggaaaaag tcggcttggg cgacaaagtg gatttgtatc cctaccagct
    33901 ttccggcggt cagcagcagc gcgtcggcat tgcccgcgca ttggcgattc agcccgagct
    33961 gatgttgttt gacgaaccca cttccgcact cgaccctgaa ttggtgcaag acgtgttgaa
    34021 cgccatgaag gaattggcgc gggaaggttg gacgatggtc gtcgttaccc acgaaatcaa
    34081 gttcgcgctg gaagttgcca cgaccgttgt cgtgatggac ggcggcgtta tcgtagagca
    34141 gggcagcccg aaagagttgt tcgaccaccc caaacacgaa cggacgcgga gatttttaag
    34201 ccaaatccaa tctaccaaga tttgattaag catttttcct gtgtttacag aggccagatt
    34261 agattcggat tgctttcgat gacggctttg aattggtttt gaatccgctc gatggcttct
    34321 tgcgtatccg cctcaaaacg caacaccaga atcggcgtgg tattggaagc acgcatcaga
    34381 ccgaagccgt cgggaaattc aacgcgcaga ccgtcgatgg tgatgatttc ggttgcgcct
    34441 tcaaattcgg ctttggcggc gagttcgtcg ataacctgat ggccgttgct gccttcgggc
    34501 agggcgatgt tgagttcggg cgtggaaatg ctttgcggca ggttgtttaa cacttcggac
    34561 ggattatcgg aggcagacag gatttccaag aggcgtgcgc cggcgtacag accgtcgtcg
    34621 aagccgaacc agcgttcttt gaagaagatg tgtccgctca tttcgccggc aaccggcgcg
    34681 ccggtttttt tcatggagga tttgataaag ctgtggccgg ttttttccat cacaggttcg
    34741 ccgccgtgtt ctttaatcca aggcgcaagc agacgggtgg atttgacgtc gaaaattact
    34801 ttggctttag gattgcggct caacacgtct tgcgcgaaaa gcatcagttg gcggtctgga
    34861 tagatgatgt tgccgtcttt ggtaactacg cccaagcggt cggcatcgcc gtcaaacgcc
    34921 aagccgattt cggcatcgcc gtttttcagc gcggcaatca aatcttgcag gtttttgggt
    34981 ttggatgggt cgggatggtg gttggggaaa ttgccgtcca cgtcgcagaa aagctcggtt
    35041 acttcgttgc ccaagccttt atagagtttg ccggcaaacg cgccgcccac gccgttgccc
    35101 gcgtcgatag cgatgttcat cgggcgtttg agtttgatgt ggccgacgat gtggttgtgg
    35161 tattcgccgg agatgtcttt ttcggttacg ttgccttgtt tgtcggcggc aacaaaaccg
    35221 tctttttcaa taatggctaa aagttcttga atggcttcgc ctgcgagcgt gtcgccgccg
    35281 agcatcattt tgaaaccatt gtaatcgggc ggattgtggc tgccggtaat catcacgccg
    35341 ctgccgccgc attcgttgat ggcggcaaaa tagagcatgg gcgtggcgac cataccgacg
    35401 ttgaggacgt cgatgccgct gtcggtaaag ccgcgttgga tgtgctccat cagttcggga
    35461 ccgctcaagc gtccgtcgcg tccgagcgcg atgcgggtca tgcctttttc ggcggctttg
    35521 gcggcgatgg ccctgccgat gagataggcg gcatcgtcgg tcagggtttt gccgacaatg
    35581 cctcggatgt cgtaggcttt gaagatgtcg cgggcaatat ttgccatgat ggtttccttg
    35641 ttgtggtttc aggaaaggag gctattttaa cacgttgcaa cattgtccga aggcttgcgg
    35701 gaggtgttca gacggcatat gtgcttggat tttatgccgc ctgaaacaaa aaaagcagcc
    35761 tttgtgcagg ctgctttcgg attgccggtt tataccgctt cggctttaat gatgacgaca
    35821 ggttcgctcg gtacgtcgtc atggtagccg tggcgtttgg tggatacgcc ttcgatggca
    35881 tcgacaacat caaaaccgtc aacgacttta ccgaatacgg catagcccca gtcttggacg
    35941 acggttttgc cgtacagctc tttagaacgg aagttcagga aagcgttgtc ggcagtgttg
    36001 atgaagaatt gcgcgctggc ggaatggggg tcggaagtgc gtgccatggc gatggtgtat
    36061 ttatcgttgg gcaggccgtt ggacgcttcg ttttgaatcg gatcgcgggt ttctttttcg
    36121 ttcatgtttt catccatgcc gccgccttga atcatgaagc ctttgatgac gcggtggaag
    36181 attacgccgt cgtagaagcc gtctttgacg tattgctcga agtttttggc ggtaacaggg
    36241 gctttgtcga aatcgagttc gattttgatg tcgcctttgt tggtgtgcag gataatcatg
    36301 ggtttccttt cgttagaatc cggttttgaa tgattcgaca aattgtgtct gaacgacaaa
    36361 cttcaaggtc gtctgaaaaa tattctttca gacggtcttg ttgtttaggt cgatggttta
    36421 catcagtaca gcataagccc acagagcaac caatactacg cagaggatgt tcagcagtat
    36481 gccgacattc atcatttcgc gttgcttgat taagcccgtg ccgaacacaa tcgcgttagg
    36541 cggtgtggca accggcagca tgaaggcaca agatgcgccg atgccgatga cgaataccaa
    36601 gacttgttcg ggcagcccca tctgcatagc gatgccggag aaaatcggta caagcaatgc
    36661 ggcggaggcg gtgttgctgg tgaactcggt cagaaaaata atgaaggcgg cgacgatgag
    36721 tatcaccaaa aatgcgggcg cgccggaaaa ggtggcggca acctgctgtc ccaaggcttc
    36781 ggacgcgccg gatgttttca acagcgtgct caggctgatg ccgccgccga agagcatcaa
    36841 cacgccccag tcggtattgc gggcgacttc cttccattgc gccacgccga agacgacgac
    36901 ggcgacggcg gcactcaggg cgataacggt gtcgggattg gaaatgccga aggcggtttt
    36961 gattttggag ctgaatatcc acgcggcggc tgtggcaagg aaaatcaaca gcgcgatcac
    37021 gcggtgcagc gtccaaggga tggattcggc tttgatttcc acgcgttcgt tcaaattagg
    37081 tttgaggatg acgtacaggg agagcagcat caagggcaga atcaacagca tcatcggcag
    37141 gccgagcttc atccagccga cgaagtccag atttagggct ttggcggcaa tcaggttggg
    37201 cggcgagccg acgagcgtgc ccaagccgcc gatgctggcg caataggcga tgccgagcag
    37261 gaggaagacg taggttttgt gttctttttc ctggtcgagg tggctcagca tacccattgc
    37321 tagaggcagc atcatcgcgg cggtggcggt gttgctgatc cacatggaca gaaaggcggt
    37381 aacgaggaac aacatcaaaa ccgccacttt catattgccg cgcgacaggc gcaacaggct
    37441 gacggcgatt ttacggtcca gccgctgcat atgcagggcg gtggcaagcg cgaagcctcc
    37501 gaaaaaaatg tagataatcg ggttggaaaa atcagccatc gcctttttga tgtccatgtc
    37561 ggggaaaccg agtacgacgg cgagaatcgg caccatcagt gcggttacgg taatgtggac
    37621 ggcttcggta aaccaaagtg cggcaacgaa aatcagcagc gcgatacctt tattggcatc
    37681 ggggctgtaa ggcaggatgt ggtaaatgcc gaaacagacg acggcggaaa taatggtggt
    37741 cagcaggccc ttaaagtcgg taatcggctt ctgcgcactg agcagctcga cgttttcggg
    37801 atgctgggtt ttgtcctttg catgcaggtt catgaatact cctttaaggc aataaaatcg
    37861 gtttttcttt tgtgtcgtgc aatccgaaac ggtttgtgga accgccgatt ctacaactgg
    37921 ttcgagtata tttgtaatct gatgtagtgt aaatatattg taaacgattt gtcggttttg
    37981 tttatgagat gggattgata tgtaagggga aaaataggat gtatcgggaa gaggtgcatc
    38041 ctgtttgggg gaaataaacc gattcagtcc gggcggtcgg cggcgcgggc ggcaaagagt
    38101 gcgagaaccg tacctgccat atcggcaaga acatcgccca aactgccggt tctcgttgcg
    38161 gtaaaccatg cctgcgcgca ttcgctgaag agggcgaaac agagggcaaa gaccatcagg
    38221 ctgcggtagg ggatgggaag ttttccggtt ttgaatgctt tggtcaaaag ccagatttgt
    38281 gcgaaaaaca gggcaaggtg tgctgctttg tcgaaatgcg gaaacggcgg cggcgcggtg
    38341 tcggcagctt tgaagagcag cgaatagatg ccgccggcaa accacaatgc ggaaagcagg
    38401 ctgaagcggt tgcgcggcag cttcatgccg cctcctcgtc cagccacgtt tggcagattt
    38461 tggacaggcg caggaatttg ccgccgcgtg cggcaagtat gtcgcgccat tgtgccactt
    38521 cttcggcgga tggtgcgtcg tcgatgctgc attcgtacag caggaaatcg agggtttctt
    38581 cgatgacggg gatggattcg gtttggataa gctgcttgag ttcggtcatg actgttcgga
    38641 tatggaaatc gggaacatgc cgtctgaaag ggcttcagac ggcatcgggt catttgctgt
    38701 gcaggaagcg ggttgcttct tcccatttgc cggcaaggat gtcgggtatg gcttgcaggg
    38761 atttggcgac ggcatcgtca atctgtcggc ggtgttccgt actgggtttg ttcaggacat
    38821 agccgacgac gaggttgcgg tcgcccgggt ggtcgatacc gaggcgcagg cggtaatagt
    38881 ctgccgtgcc gagttttgcc tgaatgtctt tcaagccgtt gtgtccgccg ttgccgccgc
    38941 cgagtttgaa tttaatccgt ccgcagggaa tgtcgagttc gtcgtggacg acgaggattt
    39001 cttcgggttt gattttgtag aactgtgcaa gcgcggcaac tgcctgtccg gaacggttca
    39061 tgaacgtggc aggtttgagc agccaaacgt cgccgtcggg cagggcggca cgggcgactt
    39121 cgccgaagaa ttttttttct tctttaaatg aagccttcca tttccacgcc agttcgtcga
    39181 ggaaccaaaa acccgcattg tgtcgggttt gttcgtattc tttgccgggg ttgcccaatc
    39241 cgacaagcat tttgattttg tttgacatga tattttccgt gtttctgtcg aatgctgtct
    39301 gaaggcttca gacggcatgg ttattcttct tgattttgaa cgcgtttgcg gcgcgcttct
    39361 ttggggtcga tcaacagcgg gcggtacact tcgatgcggt cgccgtcgcg caggggcgtg
    39421 tcgtctttga cggctttgcc gaaaatgccc aaaggcgcgg aatgcaggtt taaatcttca
    39481 aatatgccgt ccaaaccgct ttgcagtgcg gcggcgcgga cggttgttcc ctcggcaagc
    39541 tgcatggttt tcaaaacctg tcggtcgggc agcccgtaca caatctcaat ttcaagcata
    39601 acggcggtct gcctctttga cgaacgcttc gaccagcgtg gcggaaaggt ggttgaagac
    39661 gggggaaatt aaggcggaca aaacggcatt ggaaaaatcg tattccaaat tgaattcgat
    39721 tttgcacata tcgtcgccca aatcgataaa tttccacgtt ccacgtaagg ttttgaacgg
    39781 accttcgagc agttccatac ggatttccct gcccggaatg ttgcggttgt gcgtggcaaa
    39841 cgattggcga acgtgcatat aatccataaa cagccgcgcc ttcagttcgt tgccgctacg
    39901 cccgatgact tcggtcttgc tgtaccacgg cagaaagtgc gggtaatcct caaccttgtc
    39961 gaccagctcg aacattttgt ccgcgccgtg cagcaccaag atgttttttt caactttttt
    40021 cacgggcatc accaatgcgg gcgtgtattc gaagggcggt attatagcgg tttaatttta
    40081 aaccggtaca gccttgcccc gttctgattt caatttaaac cgccatatcg cagattcgta
    40141 aaaaccgata cggctttggc gtttcagacg gcattgagtg gaaaatgccg tctgaaaacg
    40201 ggatgggaaa acggcagctt gcgggctgcc gtttgttcgg gaagttaagc cttgttttca
    40261 ggctgctgct cggactctgt cgaagcggtg tctgccgggg caggtgcttc ggtttcttcc
    40321 cgagtcggag cgtgcggcgc gttatcttcc gccgcgtccg cattctcgcg caggttgtgg
    40381 ctgtaatctt tgggcgggct gggttgtttg cccgccatga tttccagtac ctgatcgcgg
    40441 tcgatggttt cccattccat cagggctttg cacatcgttt ccatcttgtc gcggttttca
    40501 tcgaggattt tgtaggcaat ctgatactgc tcgtccaaaa tccggcggat ttccgcgtcg
    40561 atgtcctgct gggttttctc ggaaatgttt tgcgaacggg ttacgctgcg tcccaagaag
    40621 acttcgcctt cgttttccgc ataaaccatc acgcccattt tgtcgctcat gccgtagcgc
    40681 gttaccatct cgcgcgccat ttgggttgcg cgttcaaagt cgtttgatgc gccggtggag
    40741 atgcgtccga cgaagatgtc ttcggcaatc cgtccgccga acaggatgga gagctggctc
    40801 aacatctgat ctttatacat actgatgcgg tcgcgctccg gaagctgcca agtcagaccc
    40861 agcgcacgtc cgcgcggcat aatggttact ttgtggacgg ggtcggtaaa gggcaggctt
    40921 tcggcaacaa tcgcgtgtcc ggattcgtga tacgccgtcg cacgtttttc gtcttcgtgc
    40981 atcaccatac tgcggcgttc cggacccata tagattttgt ctttggcgtc ttcaaaatcg
    41041 ctctgatcga ctttgacttt attgcggcgg ccggcaaaca gggcggcttc gttgaccaag
    41101 ttcgccaaat ccgcaccgga aaaacccggc gtgccgcgcg cgagggacaa taaatccaca
    41161 gattcgtcca aaggcacttt tttagaatgg acgttcaaaa tctgttcgcg cccccggatg
    41221 tccggcaggg ggacgacgac ttggcggtcg aaacggccgg ggcgttgcag cgcaggatcg
    41281 agtacgtcgg ggcggttggt tgccgcaatc acaattacag tctgattgct ctcaaaaccg
    41341 tccatttcaa ccaacaattg gtttaatgtt tgctcgcgct catcattgcc gccgcccaaa
    41401 cctgcgccgc gttggcggcc gactgcgtca atctcgtcga taaagatgat gcagggggcg
    41461 tttttcttcg cctgctcgaa catatcgcgg acgcggctcg caccgacacc gacgaacatt
    41521 tcgacaaagt cggaacctga aatgctgaag aacggcacgc cggcttcgcc tgcaatggct
    41581 tttgccaaaa gcgtcttacc cgtacccggg ctgcccgcca gcaggatgcc gcgcggcacg
    41641 cgcccgccca agctttgata gcggttcggt gctttgaggt aatcgacgat ttcctgcact
    41701 tcttctttgg cttcgtcgca gccggcgaca tcggcaaagg tcactttgtt ggcatctttg
    41761 tccagcaggc gtgcgcggct tttgccgaat gagaatgcgc cgccttttcc gccgccgccc
    41821 gtctgcatac gcataaagta gaaccacgcg ccaatcagca gcaggacggg cagcaggctg
    41881 taaaacaggg cagccagcgc gctcggtttt tcttccggcg ttacttttac acggacgttt
    41941 ttgtcgagca gtgttttaat caggttgtcg tccaaaggcg cgttggtgaa gaaggtgctt
    42001 ttgtcggtgc gctcgccctt aatcaggtag ccgctgacga cggatccttc gatgttgacg
    42061 ccggatactt cgccgttgtt gacctgttgg atgaactgag aatattcgat ttgcccgttg
    42121 tcttcttttt taccgtctaa agcgttgaac gcagccatca ggccgatacc caaggcgacc
    42181 cagacaagga ttgatttaaa ggtgttcccc acttagcaag gctccataat tgaggtgtaa
    42241 aacggaaatg attgtaaagc acgccgtctg tattgtcagc gtttattttt gcccaataaa
    42301 taaatctcac tggagcgatt gcgcgaggct tcgggtttgc gcgtctgcac cgtgccgaaa
    42361 atttcgcgca tggctgccat gtattcctga tagcctgcac cctgaaagac tttgaccaaa
    42421 aagctgccgc cggttttcag gtgttgcgag gcgaagtcta aagccagttc gcacagataa
    42481 aagctgcgtg cctgatcgct tacggcgttt cccgacatat tgggcgccat atcgcaaatt
    42541 acaaggtcga gcgggcggtt gtccaacaag gtttcgaatt gtgccagtac gtcgttctcg
    42601 cggaagtcgc cctgaatgaa ggagacgccc cctatggctt ccataggcag gatgtccaag
    42661 gcgaaaactg ctccggaagt acccgtcagc ttggcggcaa cctgcgacca gcttcccggt
    42721 gcgctgccca agtcggcaag taccgtgccg ggtttgatta atttgtcttt ttcgttgatt
    42781 tccaaaagtt tgtatgcggc acgggcgcgg tagccgtctt tttgcgccat atggacgtag
    42841 tggtcgttga cgtgttcgtg cagccacgct tttgaggatt tggaacgtac agccatagtg
    42901 gttcgcgggt cggaatggaa accgcgtatt gtacgttaat tttgccgatg tcgtgccaaa
    42961 tcgcgtacaa tgccgcatta ttctttttat tcaagcagta ggaaaatgac ggataccaaa
    43021 ttgaacacca aagaaatttt ggaactgaaa gcgcgcgcgc accatctcca tcctgttgtg
    43081 atggtcggtc agcagggtct gacggacgcg gtcatcaagg aaaccgatgc ggcattgacg
    43141 gcgcatgagc tgattaaagt gcgcgtattc ggcgacgacc gtgccgaacg tatcgaaatc
    43201 tgcactgcct tatgtgaggc ggttgacgcg caacctgttc agcatatcgg gaaacttttg
    43261 gtattgtggc gtaagaatat cgaaggctga cagcctgaag ctgttgtttt gctattgttc
    43321 tttaatgggc gggacgccgt ccttcggcgc ggcatttcgg cgggccgaaa ccctttccgg
    43381 tgaaaacgga ttttgattgc cgcccgatgc tgtctgcaag ttgcggcggc ttccgtatgg
    43441 tttgaattgt tgacaggatg attggagggc ttatgcagtt tccttaccgc aatgttccgg
    43501 cttcgcgtat gcgccgtatg cgcagggacg atttttcacg ccgcctgatg cgcgaacaca
    43561 cgctgaccgc cgatgatttg atttatccgg tgttcgtatt ggaggggtcg gcgcgcgagg
    43621 aggatgtgcc ttctatgcag ggcgtgaagc gtcagagttt ggacaggctg ctgtttacgg
    43681 cggaagaggc ggtaaagctc ggtattccga tgttggcact ctttcccgtg gttacggcaa
    43741 acaaaactga gcgtgcgcag gaggcgtaca atcccgaagg actcgtgccg tcaactgtcc
    43801 gagccttgcg cgagaggttt cctgaactgg gcattatgac ggatgtcgcg ctcgatcctt
    43861 atacggttca cggtcaggac gggctgacgg acgaaaacgg ttatgtgatg aacgatgaaa
    43921 ccgtagaggt tttggtcaag caggctttgt gccacgctga agcgggcgca caggtggttg
    43981 ctccttccga tatgatggac gggcgtatcg gtgcgattcg cgaggcgttg gaggatgccg
    44041 ggcatatcca tacgctgatt atggcgtatt ccgccaaata tgcttctgca ttttacggcc
    44101 ctttccgtga tgcggtgggc agttcgggca atttgggcaa ggcggacaag aaaacctacc
    44161 agatggatcc ggcaaatacc gatgaggcgt tgcacgaagt ggcgttggac attcaggaag
    44221 gtgcggatat ggtaatggtc aagcctggtt tgccgtattt ggacgttgtc cgccgcgtga
    44281 aggacgagtt cggtgtgccg acttatgcct atcaggtttc gggcgaatat gcgatgctac
    44341 aggcggcggt tgccaacgga tggctggatg gcgataaagt ggttttggaa agcctgctgg
    44401 cattcaaacg tgcgggcgcg gatgggattt tgacctatta tgccattgag gcggccaaga
    44461 tgctgaagcg ttgattttcg gccgggttaa ttgaaatgcc gtctgaaacc atggtttcag
    44521 acggcatttt tacggtttac aaagtcgtat ccagtgcggc ggaaatatca ttccaaatat
    44581 catctacatc ttcgataccg acagagaaac gcagcaggcc gaccctgatg cccatttcca
    44641 ttttcacatt atgcggcacg ccgctgtggg actgggaata gcaatggttg accaaacttt
    44701 ccacgccgcc gaggctggaa gccattttga ccagtttcat gtttttaatc acgctgtttg
    44761 ccgcttcacg cgtgtcgttt ttgagataaa ccgtaaccac gccgcctatg cctttgggca
    44821 tttgtgtttt cgccagttcg taatgttcgt gagacggcag gccgggatgg aacacttttt
    44881 caatggcagg atgggcttcc aaacggcgcg cgatttcgag tgcgttttgg taatgggcgt
    44941 tcatgcgcag agccagtgtt ttgatgccgc gcaacaccag ccagcagtcc atcgggccgg
    45001 caaccgcgcc ggtatgcacc atcatatcgt gcaaaggctg cgccagctct ttggttttgg
    45061 caacgacgat gcccatcaac acgtcggaat ggccgcacaa atatttggta gcggaatgga
    45121 acacaaaatc gcaacccata tccaagggct gttgcagata cggcgtggca aaggtgttgt
    45181 cgataccgac cagtgcgccg gccgctttgg ctttcgcggc aagcgctttg atgtctacca
    45241 agcgcaaaag cggattggac ggcgtttcca gccaaaccag tttgaccttg tgcgctttga
    45301 gcaattcgtc caaattatcc ggattgccca aatcggcaaa aacaacgttc accccccatt
    45361 tttgataaac atcgaccaat aaatcatacg cgccgccgta aatatcggcg accgcgacga
    45421 tggtatcgcc cggttgtagg aaggtacgcc acacggcatc aatccccgcc ataccgctgg
    45481 aaaacgcaaa acctgccgca ccgtgttcca aatcggcaac ggtgtcttct aaaatctgac
    45541 gggtcgggtt gctcaggcgc gagtagcggt aaggcacatt ttcgccaatc tcgtgcaacg
    45601 cgaacatact gttttgataa atcggcggca tcagcgcgcg gttgtgttcg tcgcaatcgt
    45661 agctggaatg aatggctttc gtggcgaatt tcatttggtc tctgcctatg tagatgtgaa
    45721 taatcgaaga ttttatcact atctgaaaaa tagaaacaat caatgcagct gctaaaagcg
    45781 agtgatataa tctcgcattt gcagattgac ggtatattcc ccggtggaaa cgccatacca
    45841 tgcacacatc tcaacaatta catgaatatt aaggaaaaac aactcatgaa cactattgca
    45901 gacgtgcaat ccagccgaga tttgcgcaat ctgccgatca atcaggtcgg tatcaaagac
    45961 ctgcgctttc cgattaccct gcaaactgca gaaggcatcc agtccacagt tgcccgtctg
    46021 accatgacgg tttacctgcc tgccgagcag aagggtacgc atatgtcgcg ctttgtcgca
    46081 ttgatggagc aacataccga agccttggat tttgcacaat tgcgcaggct gactgctgaa
    46141 atggtcgcgc ttttggattc ccgcgccggc aaaatcagcg tttctttccc atttttccgc
    46201 aagaaaaccg ccccggtttc cggtattcgg tccttactgg attatgatgt cagcctcacg
    46261 ggcgaaatca aagacggggc atacggccac agtatgaagg tcatgattcc cgtaacctcg
    46321 ctttgcccgt gttccaaaga aatttcccaa tatggcgcgc acaaccagcg ttcgcacgtt
    46381 accgtcagcc tgactgccga tgccgaagtc ggtatcgagg aagtcatcga ttatgtggag
    46441 gcgcaggcga gctgccaact ctacggcctg ctcaaacgcc ccgatgaaaa atacgttacc
    46501 gaaaaggcct acgaaaaccc gaaattcgtg gaagatatgg tgcgcgatgt cgctacttcg
    46561 ctgatcgccg acaaacgcat caagagtttc gttgtcgaga gcgagaattt cgagtctatc
    46621 cacaaccatt cggcttatgc ctatatcgcc tacccgtagg cgcgtttgca atgatgccca
    46681 aatgccgtct gaaaggcatt ggggcgttat tcccgagtct gccgccgctt tgttttccca
    46741 gccgtagcag agatgggtaa agtccggatg aagcttgatg gcgaggacgg attgtatggt
    46801 gcggcagagc cgtatcggtt tgaaatcaat ttgcaatcaa agtaataaaa ggatgcacga
    46861 tgacagtatt aagcaaagag caggtcctat ccgcatttaa aaaccgcaaa tcatgccggc
    46921 attacgatgc ggcacgtaaa atcagtgccg aggattttca gtttatttta gaactcgggc
    46981 gtttgtcgcc cagttcggtc ggttcggagc cttggcagtt tgttgtggtt caaaaccccg
    47041 aaatccgaca ggcaatcaag ccgttttctt ggggtatggc ggatgctttg gataccgcca
    47101 gtcatttggt ggtgtttttg gcaaagaaaa atgcccgctt cgacagcccg tttatgttgg
    47161 aaagcctcaa acggcgcggc gttaccgaac cggatgccat ggcaaaatct ttggcgaggt
    47221 atcgggcgtt tcaagccgac gacatcaaga ttttggacga ttcgcgcgcc ttgtttgact
    47281 ggtgttgccg ccagacctat atcgcgttgg gcaacatgat gacgggtgcg gcgatggcag
    47341 gtatcgattc ctgtccggtg gaaggtttca actatgccga tatggaacgc gtattgtcca
    47401 ggcagttcgg tttgttcgat gcggcagaat ggggcgtgtc cgtcgccgcg acattcggct
    47461 accgcgttca ggaaatcgcc acgaaggcgc gcaggccctt ggaagaaacc gttatttggg
    47521 cataaggcaa tgccgtctga aaacgcaagg attttcagac ggcatttttt aatgcttatt
    47581 taaaacgatt cgccgggggc gagataacgc catttgccgg gcggcagcct gccgagtttg
    47641 accttgccca tgcggatgcg tttcagcccg acgacgcgca gcccgaccag ttcgcacata
    47701 cggcggattt gccgcttttt accctgtttc aacacgaagc gcagttggtc ttcgttttgc
    47761 cattctactt gggcgggacg cagtttctcg ccgtccaaac tcaatccgtg attcagtaag
    47821 gcaagtcctt tttcgtccaa ttttccgcgc acgcgcacca aatattcttt ttcactgccg
    47881 ctgttttcgc cgataagctg cttggcgata cggccgtcct gcgtcaacac cagcaatccg
    47941 actgaatcga tatcgagtct gccggcgggg gcaagaccga ttttgtgttt cggatcgaaa
    48001 cggatgcggc tggtatcgcc ttcccagtga ttttcagggg taatcagttc ggcggcggat
    48061 ttatagcctt tttccgcttg tgcgctgaca tagccgacgg gtttgttcaa caggatggta
    48121 atgcgtgccg cctgctgttc gtgggctttc ttgttcagtt cgatacggtc tgctggtgaa
    48181 actttctgac caagtacggc ggttttgccg ttgaccgtta cccagccctg ttcgatgtag
    48241 ccgtcggctt cgcggcgcga acaaagcccc agttgcgcca tgcgtttgga gaggcgcacg
    48301 gcatcttctg tatggtcggg gggagttttt ggattcatag gtgttttccg gtaagggtcg
    48361 gttcagacca attgttcgcc ccagtgcagt ttttggcgca gggttttgaa atattggtag
    48421 tcggtcggat gtaggatgcg taaggggttt cggtagcggc ggatggtgat gcggtcgagg
    48481 ttttgcacgt cgatatgggt ttgaccgtcg aaatggacgc gcgcgtcgcc gccttgggta
    48541 acgaggattt cgatttcgga cgtgtctgga atggcgatgg ggcggttggt catggattgc
    48601 gggcagatgg ggacgagcgt gaaggcgtgt aatcctgcct gcatgatggg gccgccggcg
    48661 gcaagcgaat aggcggtcga tccggtgggg gtggagacaa tcagcccgtc cgaacgctgg
    48721 gtatagacga attcccgatt gacgaagact tcaaactcaa tcatctgtcc ggcaccgcca
    48781 cgggagagga cggcatcgtt gagggcgatg gcgcgttcgg cggttttgct ttcgcggatg
    48841 agtgcggcct caatcaggat gcgctcttcg gcaaggtatt tcccttctaa aacgggcaat
    48901 agcttgtccg tcatatattc gcggggaatt tgggtcagga agcccaaatg cccttggttg
    48961 atgccgataa tcggaacggc gcgcagggcg atttcgcggg cgacggagag aaaggtgccg
    49021 tctccgccta aaacggcgac caggtcgcag tattgcccca gttcggtctt gttgacgata
    49081 tggcagccga cggtgtcttg ggtatagatg cagccttcct ttatgccgac ttcgtcgaga
    49141 tagacggtaa agccgtgctg cttcaaaaag gtaatcagcg tgtgtgcggt gtcttggatg
    49201 tcgggcgtgt tggggcgggt tacgatgccg atgttgtgaa aagggctgtt catgtcggat
    49261 gccgtctgaa ggttagtcta tccaaatgtc gcgttcgagc cggtcgaggc gttcgttgag
    49321 gcgttccacg ccgtcgcgca gtctgcttat ttcgtcgagg cagtcggcaa gggcttcgtt
    49381 gccgatgttt gcggactcgg attcgcggga aaatccgccg atttgttcgg cgatgttcct
    49441 gccgatttgt ttgatgccgt gtccgatgtc ggcggcacgg ctgccgatgt ctgcctgcgt
    49501 gccgaaaatc cgtgccaatt cgtccgatgc gcgggaacgc aggctgccga gcagggacag
    49561 taccgcgatg ccgaggatga ggtcgccttc gagcccgatg tcgcccgccc cgggttcgcc
    49621 gccttggagg attttctgta ccgcgctgtt gcggaaggta atttcggtgt ctgcaaagcc
    49681 gtttcccgcc gagagcaaac cgtcttccgt gatgcgtccc gccagtttca gcccggcaat
    49741 gttcagggtc agtgttttgc ctgcaaaggc ggcaagttcc gagcggctgt ccgggctttg
    49801 cagaatcagg cggttgatga tggggaggaa ggcggacata ttttctgatt ggggcggaga
    49861 atgcctgttt gttgctgttg ccgcttattt tacaggctta agccgttatc gcaaacggta
    49921 cggatgattt tgcccacgct gtcgtcgggt gcgaaatcca gcgcgggcag gccgagtttg
    49981 gcggcttctt ccgtgtagaa ttcgcgtcgt gtcgggtggc gcggttcgat aatgtttttc
    50041 agccgcctgc cgccggggtt aaatgccgtc tgaaacaggc tttcgacggc gatattacgg
    50101 tggacgatgt tgatggggcg gttgccgccc gggatgtttt gcttttgaac aaggcggctg
    50161 acgggatggc gttcggcgca ataaagcccg cccagccgca ggatgtcgat gttggagatg
    50221 ccgctgtcga gcaggtgttg ttcggcggcg aggatttggc gggcggactc ggtttgcgga
    50281 tcgggtgtgg cggtttcgtc gcattcgcgc gctgtatcgc cgtaaacgct ggtgctgctt
    50341 gtgaaaatca ggtgttgcac gttgcacgcc cgggcaagtt ctgcccattg tttgacggtg
    50401 tcggcgtaat gcgtcagcga ggagggcggt agcaggaaga accagacggg tttgtcggcg
    50461 tggtgccgcc acaatgccgt ctgaaaggca tcggtgctgc cgaggtcgaa ggtgtcgaga
    50521 tgtatgggca ggttgatgtc gtccgaagtc aggctgcgtt ttatggcggc gacgcggctg
    50581 ccgtgttggt aaaacttttg tgccagcggc aggccgaggt aacctaggcc tgtgatggag
    50641 atatggggcg gggggactgc gcgcattcgc tgataccgtc gggtaagtgc cgtctgaagg
    50701 ctgattcgga cgctgtgggt ttacgggttg ccgttgccga ttttccggtc gtatttctcg
    50761 cggtgttcgg gcaaaagata aggacgaagg aggcttaagg tacgacggac gccgcgtgct
    50821 ttggagtctt cggtcagctt ggtgcggccg cgcagggagc tgtcgaagtc gaaccagtat
    50881 ttcgtgatca tccacatatt gacggcgagg tcgttcatgg cggtttggtc ggcttggatg
    50941 atgttcagac cgttgagctg ggtcagcagg ttgaccaaga gcggggagac tttggcttgg
    51001 gtgaaggtat tgtgttcgcc caatagttcg gcactgcgtg caagcagggt gttcacgtcg
    51061 ctgaatagga agcggtattc ccacatcacg tcgtaaatgc ccgccatata attgatggag
    51121 tcttccacat cagacggcaa cacggcttcg ttgaggtatt ccagcagggc ttcgctgtaa
    51181 cgtttgaaca gttggacgat gatttcgtct ttgttgcgga agtggtaata gaggttgccc
    51241 ggactgatgc ccaagtgggc ggcaatatgg ttggtgctga tgttgcgctc gccttcctcg
    51301 ttgaaaagcg caaggctggc gtcgatgatg cgtgtgtaag tattgatttt ggcggggcgg
    51361 gtcacgggca tactccttgg atttacaggc tgaacgaagc aggcagccaa ttgggttcgg
    51421 cgtgcaattc tacctgaaac cgagcaaata ctgtaaattt gatgtgttgc gccaactgcc
    51481 ggacatcgtt tgccgaggca ttgtttttgt tcactaagac caaagcctgc ctgtcatgta
    51541 ccgccgcgcc gccgatttga aagcctttca gacgacattg gtcgatcagc cagccggcgg
    51601 cgagtttgac cgaaccgtcg ggctgcggat agcgcggcat atcaggatgc cgctgcaaca
    51661 aggtggcggc tttttctgcg ctgacgacgg ggtttttaaa gaaactgccg acattgccaa
    51721 gcacgttagg attaggaagt ttactgttgc ggattgcaca cactgcatcg gaaacatctt
    51781 tcgccgtcgg caccctgccc gcgctcagtt cggcaacggc ggccgccaaa tcgccgtaac
    51841 ccaagttcgg cacaaaatgc gtttttaatg caaatacgac cgaaacaatc acataacgcc
    51901 ctttaccttc ctgcttgaac aggctttcgc ggtaggcgaa gcggcagtcg gcattggaaa
    51961 gggttacaaa ggtttccgta tccaaatcga agcagcgcac gctgtgaatc acatctttcg
    52021 cctctacgcc gtatgcgccg atgttctgca cgggcgacgc gccgaccgta cccggaatca
    52081 ggctcaggtt ttccaaaccg ttcaaaccca gcgcgacggc gtgcaggaca aaatcgtgcc
    52141 agatttcgcc cgcctgcgct tcaatcagaa ccatgccgtc tgaacgagca atttcgcgta
    52201 tgcctttgtt ttccatatgt acgaccagac cggcgtagtc ctccatcaaa aggatattgc
    52261 tgccgccgcc cagccataaa acagtatctc ggttgaactc gggtagccgg acgatgtcgc
    52321 gcaacccgtc ggcgtgttca agcgcaataa aggctcgggc ttgggcgcgc aggccgaaag
    52381 tgttgtaggg ggtaaggtcg gttcggtatc ggatgggttg catggtttga actttaaaat
    52441 gagtattgcc agtggcgggc ttcagcccat cgtttctata gtggattaac aaaaatcagg
    52501 acaaggcaac gaagccgcag acagtacaaa tagtacggca aggcgaggta acgccgtact
    52561 ggtttttgtt aatccactat atttttaatc ggcggagttt tcagacagcc ttatgcgatc
    52621 tgaccatctc cctactgcac aattccaagc accacaccaa ggcgatggcg gcgatggtga
    52681 gcgaggcaat caatgccgtc cagaagccgt aaatgcccat atcgaaacgg taggcgagca
    52741 ggtagcccgg cagcagaccg cagccccaaa aggcggcggc gtggatgaac atcggcacct
    52801 ttgtaacttt gtagccgcgc aaggcgtagg aggcgataca ttgggtgaag tctgccggtt
    52861 ggaacaagcc ggcgaacagt aagacggtgg cggcgatgct taaaaccgcc ggatcattgt
    52921 tgtacatact taccagcggc gaacggaata ataccaagga aagcacggta atcacggcga
    52981 gcatccatcc tgacaccagt gacacgcccg aaatataacg cgcccgcgaa aattcgcgcc
    53041 gcccaagcga aaagccgatg cgcaccgtcc ccgccgagcc gacgctttgc ggaatcatat
    53101 agagaatccc cgacaaactg atgccgacct gctgcgccgc cacataatcc tcgccgaaag
    53161 gcgcaatcaa aaacacgata aacgaaaacg cgctggcttc caaaaaataa gacagcccga
    53221 tgggtgcgcc gattttccaa atctgtttga acaccgccca atccggtttg ccgaatttcg
    53281 ccgtcagtcc gaatgggcgg aagaaatttt ccttggcgat ataaatccac aatgccagcg
    53341 cgctgaacca aaacaccgcc atcgtcgcca gtccgcagcc tgcgccgccc aaagcgggca
    53401 taccgaattt gccgtaaacg aaaatatagt tcagcggcac gttcaacaca aacgccgcaa
    53461 agctgaccaa cataatcagg cgcgggcggt tcaggctgga ggcgtaggcg tgcagtgcgc
    53521 ggtgtaccat tgccgccggc atcgccaagc tggtgaacag catatactgc gccattgtgc
    53581 cttccacata atcgctcaag gtcagccagt tgcggaacgg cgtaatcgcc gcccacatca
    53641 agaccatgcc gaacacgccc aaaaacagcc cgaaccaaat cccctgccgt cccgtttcgc
    53701 ccacttcgtc ggttttaccc gcgccgtaaa gctgggcaat catcgggttc agcgccgcca
    53761 taatgcccat aaaggtaata taaaccgtgg caaacgcgct gctgcccaaa gccaccgccg
    53821 ccaagtcttc cttgcccgca ccgcccgcca tcacggtatc gacaaaaccg atgcccacct
    53881 gcgcgacctg cgccaacagc atgggcaggg caagagcggt cagcaggcgg acttctttca
    53941 ggaagacgga aaaggaaaag cggttgaggt cgagcagcat aagtgttcaa tcaacaaaaa
    54001 tgccgtctga agcagaaaac ggcagcagga agtgatgaga aataatggcg cacattatat
    54061 cgtaaaaaaa tgccgtgccg tcagacggcg gatacagggt ataaaagtat attcagattg
    54121 tgtgtatttt atggtaaagt ttggttttaa cgacttgacg gcattgagcc gtcggacagg
    54181 ggctgttcgg attctgaatc ggaaggaagc atcgccgttt tgacagcggc gtgatgcgtt
    54241 gcggcaaaga tgccgtctga ttgcggatcg ggcagccttt tgtattgaca tgataaaata
    54301 gaaggcagat tctcatgcag acatggcagc ttccggaaca tatcgccgac gtactgccca
    54361 cgaacgcgcg gcagcttgaa agcgcgaggg agcagttgtt ggcactgttc cgcgtacacg
    54421 gttatgaact ggtacagcct ccgctgatgg agtacgcaca ttccctgctg acgcatatcg
    54481 atgcggggct ttccctgaaa accattttgg taacggacag gctcagcggc aggcagttgg
    54541 gcatacgcgc cgacatcacg ccgcaggtgg cgcgtatcga tgcccatctt ttatccgcca
    54601 accaagggat taaccggttg tgttatgccg gtccggtgtt gcacgcgcag tccgacggtc
    54661 tgctgaatat gcgcgaaccc ttgcaggcag gggcggaaat gtacggtttt gccgacatcc
    54721 gtggcgacat cgagctgata gacctgatgc tgaaaagcat gaaaattgcc gatatgggca
    54781 aagtgctgct ttcgctgggg catatcggca tatttcgcgc cttgtccgat gcggcgcatt
    54841 tggatgcggg gcagtctgca acgctgcttg ccttgatgca ggataaagat accgagacgg
    54901 tcgaagcgca ggtcaaggct tggaagctgg acggtatgtg ggcaaaagca ttctcgctgc
    54961 tgccgcgcct gtacggcggg cgtgaagtgt tgtccgacgc gcgcggacgg ttgccggatt
    55021 tgtcggcggt cggcggcgcg ttgggcgaat tgcaggcggt gtgcgacgca ttccccgatt
    55081 gtgaaatcca tatcgacttg tccgagctgc gcgtcgacaa ttaccacacg ggcttgctgt
    55141 atgccgccta tgccgccgat ttccacgacg cggtcgcgcg cggcgggcgt tatgacggat
    55201 tgggcggata tttcggcagg gcgcgcccgg caacgggatt cagtttcgac ttgcgcagct
    55261 ttatcgggcg tttgcccacc agcgaacggc agcccgccgt gttggtcgat gcggaagatg
    55321 ccgaagcggc gcgcgaagca gtcgaagcct tgcgtgaaca agggcagtgt gtcgtgattg
    55381 actacggtat cggacacaat gtttcggaag agcttgcagg ccgtctgaaa aagacggacg
    55441 gcgtttggca ggtcgtgaaa cgctaaatac ccgttcatgg cggatgaaag gcaaatcgtg
    55501 gtggggcgca aagccgcacc ggtttgggga tttccgcaat aatttttaat atcgataggt
    55561 tatatggcta tggctaaaaa tgttgtagta atcggcgcac agtggggcga cgagggtaaa
    55621 ggtaaaatcg ttgactggct ggcggaagaa gccggcggcg tggtgcgctt ccaaggcggc
    55681 cacaatgcgg gtcatacttt ggtcgtcggc ggcaaaaaaa ccattttgcg cctgattccg
    55741 agcggcatcc tgcatgaaag tctggactgc ttcatcggtt cgggcgttgt cgtctccccc
    55801 gaagccctgt tgggcgaaat cgacgagtta aacgctgcag gcgtgaaaaa cgtcgaaggc
    55861 cgtctgaaaa tcgcgccgac ctgcccgctg atcctgcctt accacatcgc gctcgaccaa
    55921 gcccgcgaag catcgcgcgg caaaggcaaa atcggcacga ccggccgcgg catcggccct
    55981 gcctacgaag acaaagtggc acgccgcgcc attcgcgccg ccgatttgct gcatcctgaa
    56041 aaactgcgtg aaaaactgga tgccatcctt gcctattaca atgtccaact gcaacatctg
    56101 cacaatgccg agccggttaa agcggaagac gtgatggcgg ttatcgaaaa agtcgcgctg
    56161 cgcattgcgc cgatgattac cgacgtgtcc cgcgtgttga acgagaaaaa caaaaacggc
    56221 gaaaaactgc tgtttgaagg cgcgcaaggt gcgttgttgg acatcgacta cggcacttat
    56281 cccttcgtta cctcgtccaa ctgtctggcg ggagccgctt ccgcaggcgc gggcgtaggc
    56341 cctcaaatgc tggattatgt tttgggcatc gtcaaagcct ataccacgcg cgtcggttca
    56401 ggcccgttcc cgaccgaatt gttcgacgaa gtaggcgcag gtttggcgga acgcggacac
    56461 gaattcggct cggtaaccgg ccgcgcacgc cgctgcggct ggtttgatgc cgccgccctg
    56521 aaacgctcca tccaaatcaa cggcatttcc ggtatgtgca ttaccaaact cgatgtaatg
    56581 gacggcgttg aaaccatcaa tatctgcgtc ggctacgaat tgcccgacgg cggcaaaacc
    56641 gatatcctgc cttgcggttc ggatgcggtg gaaacctgca aaccgattta cgaaacaatg
    56701 gagggttgga aagaatcgac tttcggcatc aaaaattatg aggaactgcc cgataatgcc
    56761 aaagcatatt tgaaacggat tgaagaagtc tgcggcgcgc cggtcgccat cgtctccacc
    56821 ggccccgacc gagaagaaac gattgtgctg catcatccgt tcgcataagg ttttgcagta
    56881 aaattgccgt ctgaagccct aatccgccgt tggtcataaa tagtagggta tcaacatttc
    56941 gggctacaat ggtacgtcag ccaatgccaa gacgtgccag cctgatttgt tgatgtgtgt
    57001 actattgcat aggcggttaa gccatgcagg agatgaaagt gtatatttcg cgcaaagccc
    57061 attagccgca agcgaggggc ggggtgcgcg agagagaggg gggcaggtgc taagtcattg
    57121 gttatctcct tactatctat ctaactacgg gtgcattatg cgcctatgcc tgttgcttgt
    57181 caaacactat acagttaaaa tgtgtaaaga tttagtaagg acatataccc ttttctttac
    57241 atttagctcc atcggatacc agtgcgttca gagaaaattt gaaaatttct atattttggt
    57301 tgtataatgc tttcatttta gaaaggtcta taatgccaaa atcactctcg ctacaagatg
    57361 ttcagttaag gttttccagt aaatttcctg ataagacggt tttgaagttc actaaaaact
    57421 acgaaccggt aacaatccaa tgccctttgc atgggtcggt tgtttacggg aatctacaag
    57481 ctgccatgaa atcctcaaca ggatgtcctg aatgtactcg aaatcccgaa aagccctctc
    57541 caaacgccgt tgccattagg ttggaggaca cagagacagg ggaaatctac gagtttgcaa
    57601 gtacactggc tgccagtaaa tttatcggtt gctccaacag cactttagct gtacgtttaa
    57661 gcggacgcac tccgtttgac cgattgatta ggtatcgtta taggttggta aagtaagttc
    57721 acaaccacta tggcacttac atttactcaa gcagtttcta agctaacctc taaatttcca
    57781 catttgaatc ttgtggagtt caatggcgtt cgttacccga cggtaatcgt ctgtcctata
    57841 cacgggaggg ttacttgctc tacattcaaa agtatgttgg actctaaaag tgggtgtcca
    57901 aaatgtgcat cttatggtgt caattcccac aaaattccag aagatacaat agataaatta
    57961 tctaaaaata cagtattgga ggatactgta actggcgaaa cacttacatt cccctcaaga
    58021 gcatctgctg caaggtcatt gggtataaac ccagcagcta tcactgaccg tataaaaggt
    58081 cgggttcaca cagagacttt acttgcaggg aggtataagg ttcacatctg cactaaatga
    58141 cgtatacact ttttaacagt gtatacccct cgccactatc aggtgcttct cgaaaaattt
    58201 gacattttta taaatttgct attaaatcca tttgacaatc aattttggag tctcaaatgg
    58261 ccaaatcttt caaccaagca gcttctgaac ttactgatat attccctaat atctctctaa
    58321 ccggctttga cggtgtgaat tacccagtaa ccgttaattg tcctatgcac gggaacgttc
    58381 gttattcgac atttaatgcc cttataaagt caaagtacgg gtgtcctgag tgtgctaaga
    58441 tgtcaaaaac ccaaacacct ccaaatgtag ggaagcccct cctcatcctc gacacaacga
    58501 ccaacgaaac actcacgttc ccaagcgtta ctgccgcagg tgctgcttta ggtgtacatt
    58561 tccaacaaat caatcacagg ctcaagggtc gaacgtcgcc cgacaacctt atttcaaaca
    58621 ggtacaaagt gcttgggtac gataggtaag gttcacaaca ccctaaatcc tacgaaccaa
    58681 gctcgacgga cgttcaaatc ccgattagag ttaatttatg taaagattta gtaaagacgt
    58741 ataccatttt tctttacatt gtgcttgcgc aggattccag gtaggtctca aaaaatttga
    58801 aaatttctat attttggttg tgtaatccat ttgcacataa cctatggaga caaattatgg
    58861 gtaagcgaat gactttcgat accgccaaat cacgctttca agagaaattt ccacatttag
    58921 aattgttgga gttcagtggc atttataaac cttccagtgt tagatgtcct acgcacgggg
    58981 ttgtccaact tttgtattac gacacagcta taaagtcaaa gtatgggtgt ccggagtgcg
    59041 ggaaacttaa aatgaaggaa aatacgcctc cccaaaacca aaaacctgtc tccatcctcg
    59101 acaccgccac aggcgaaaca ctcacgttcc ccagcgtaca agctgccgcc aaagccctaa
    59161 acacccccta cggctctata cgaaccaagc tcgacggacg ttcaaatccc gacaaccttg
    59221 tctgtaacag gtataaggtt ctgctataat caacctatgg aaaatattga agaatacgca
    59281 ctgctgtctc ccgaagccct gctggaacgc ctggataccg ttttgagtat cagaatcggc
    59341 ggcaagggtt gggaatccag tatgaccgcc aactttgcac agacgctggt cgaaatacag
    59401 gacagtctgt acagggttgt gtcaaccgtc caatacgggg atgacaacct caagcggttg
    59461 acagcggaca aacggaagca gtatgagttg aacttcaaga tttccgaggg ttctacgcgt
    59521 gtagagtccg actttaaaga gactttggtt cggttcggta gagatatgct tcaagatatg
    59581 ccccctaaaa tccgttcggc aacgctggta gcgttgacga ccctgcttgt cggaggggcg
    59641 ttgggttacg gttatttgga atacctgaag caggttgctt cggaagggta tcagaccgag
    59701 cgtctgtata atgccgtcga ccgtcttgca gaatcccaag aacggataac gtccgccatc
    59761 ctgaagggtg ctagaggtgc cgatttcgtg caaatcggca gacgttccta cagtagggag
    59821 gatatatcgg aggcaaatag acgtgcagag cgtgtcccgt atggcgcaga gttggtttca
    59881 gacggcaatt ttaccgctgt tttatctgat ataggggatt aacaaaaatc aggacaaggc
    59941 gacgaagccg cagacagtat aaatagtacg gaaccgattc acttggtgct tcagcacctt
    60001 agagaatcgt tctctttgag ctaaggcgag gcaacgccgt actggttttt gttaatccac
    60061 tatattttct gtccggacac ggtttatcag ggtatatcaa tgcggcgtat ccggtgcgga
    60121 aatggatacg gttggtgttg gtatggaaac ctgatgtttt cagacagcat atacaaaaaa
    60181 ccgtactgct tgcgcgtacg gtttttttgt tgtttcaaat cggctcagag cgatttgagg
    60241 cgggcgattc ggttgtccag cgaagggtgg gtgctgagca gggagtcgcg cgtatctccg
    60301 gcgatgccca ttgcgttcat ttcttcgggc aaatcgaccg ggttgccttt aagcctttgc
    60361 agggcggaaa tcattttcgg tgcgccgacc agttttgccg cgcccgcgtc ggcgcggtat
    60421 tcgcgttgtc ggctgaacca catgacaatt aagctggcaa ggaagccgaa taggatttgg
    60481 aataccatgc tgaccaggaa ataagttccc tgcgactggc tgccgtcgtt gtttcgggca
    60541 atcaggttgg caataatgcg cgacaggaac acgacgaagg tattgaccac gccttgaatc
    60601 agcgtcagcg taaccatatc gccgttgccg acgtgtgcca tttcgtgcgc caatacggct
    60661 tccacttcgt cgcgcgtcat atggtcgagc aaaccggtgc tgacggcgat cagggagctg
    60721 tttctcgatg cgcccgtggc aaaggcattg ggttcggggg agtggtagat ggcgacttcg
    60781 ggcgttttca ggttccattg ccgcgcttgg gcttcgacag tgttcaaaag ccaggcttct
    60841 tcttcggtgc gcggcgtgtc gataacttcc gcgccgaccg attgtttggc gatgaatttg
    60901 gacatcagca gcgaaataat cgaaccagtg aagccgacga cggcggaata cgccaacagg
    60961 ctgcccgtgc cgccccggct gttgatgccc aaaaccgcca aaacaatgtt gattacgacc
    61021 aaaacagcga tattggtagc caaaaacaga aaaattcgtt tcacggatgt tcctttttgg
    61081 tagggtgtga tgttttgaaa ttttggggat tgtcccaaaa agttgccggc ttgtgaatat
    61141 cagactcggc aaaggtatgc aaaacatttg cttgcaaatg gcagtttgtg cagttggttt
    61201 ttgaactatt gtgccaagcc gtgtagaatc gtaaaccatc tgtttgattc caataaacac
    61261 atttcaaagg atcacttcat gaaagcatta tttttaggcg cgccgggcgc gggcaaaggc
    61321 actcaggcgc aattcatcac cgccgcgttc ggcattccgc aaatctctac cggcgacatg
    61381 ctccgcgccg cgattaaggc aggcacgccc ttgggtttgg aagcgaaaaa aatcattgat
    61441 gaaggcggct tggtgcgcga cgacatcatt atcggcatgg tcaaagaacg catcgcgcaa
    61501 gacgactgca aaaacggttt cctgtttgac ggtttcccgc gcacattggc acaagccgaa
    61561 gcgatggttg aagcaggcgt ggatttggat gcagtcgttg aaatcgatgt gcctgacagc
    61621 gtgattgtcg accgcatgag cggccgccgc gtgcatttgg cttccggccg tacttaccac
    61681 gttacctaca acccgcccaa agttgaaggc aaagacgacg taaccggcga agatttgatt
    61741 cagcgcgacg acgacaaaga agaaaccgtg aaaaaacgcc ttgccgttta ccacgagcaa
    61801 accgaagttt tggtcgattt ttacagcaaa ctggaaggcg aacacgcgcc taaatacatc
    61861 aaagttgacg gcactcagcc ggtagaagcc gtgaaagccg aagtattggg cgcattgggc
    61921 aaataaatcg aaaaggtcgt acccacgggc aggcttcgca ctctgaaaac agaaaatcag
    61981 gttttcagac gacctgtttt tgataaacag cgtgttgcaa ccgaaaaata atcatttggc
    62041 gtcattcccg cgcaggcggg aatccatttc tgaatttggg caatcgctgt ttaaatctga
    62101 tgaactgagt tttatcaatg gattcccgcc tacgcgggaa tgacggctga tgtaccggtt
    62161 caaatttatc cgaaacagtt tgtcggaggc ttgagtccgc gtaggtcgga catcaatgcc
    62221 cgacctacgg tttgaattta cgttcttata gtggattaac aaaaatcagg acaaggcgac
    62281 gaagccgcag gcagtacaaa cagtacggaa ccgattcact ttgtgcttca gcaccttaga
    62341 gaagcgttct ctttgaacta aggcgagaca acgccgtacc ggtttaaagt taatccacta
    62401 tactgcgaaa aagacgataa aggtcgtctg aaaacccgaa acgaaaacac catgaatcct
    62461 ttaatctccg acttccaaac tccgcaacaa cgcacccccg ttatcgtcgc ccttgatttt
    62521 tccaacgaaa aagacacgct cggattcgtc cgcaaccttg acccgacatt gtgtcaaatc
    62581 aaaatcggca aagagctgtt taccgcgacg ggacgcaatt tggcagaaag cttaatcaat
    62641 caaggtttca aacttttcct cgatttgaaa taccacgata ttccccacac cgtcgcgcaa
    62701 gcctgcaaag tcgctgccga tatgggcgtt tggatggtcg atatgcacgc atcgggcggc
    62761 cgccgtatga tggaagccgc agcagaagcc gttgccggat acggcacgaa gccgctctta
    62821 atcggcgtaa ccgtgttgac cagcatggaa caaagcgatt tggcggaaat cggtttgaac
    62881 accgcccctg aagaacaagt catccgcttg gcgaaactgg cgcaaagttc gggcttggac
    62941 ggcgtggtct gttccgccca agaagccgca ccgctgcgcc gcgagttggg acaagatttt
    63001 gtcttggtca cgcccggcat ccgcttggac gttgccggca ataatgatga ccagcgccgc
    63061 atcatgacac cggccgaagc cttggctgcc gcttcgactt atttggtaat gggtcgtcct
    63121 gtaacccaag ctgccgatcc ggtagccgta ttgcgcgaag tgaaccgcgt ggcaaacctt
    63181 gaagcaaact gattttcaga cggccttaca ggctgaggcc gtctgaaaaa atacaacgga
    63241 ggcaatatgt ccgccaagtt ccaacaagaa accctcaaat cccgtttcgc gcaagccaaa
    63301 gtcctggttg tcggcgacgt gatgctcgac cgctattggt tcggcgatgt gtcccgtatt
    63361 tcgcccgaag cccccgtgcc ggtggcgaaa atcggacgaa tcgaccaacg cgcgggcgga
    63421 gcggcaaatg tcgcgcgcaa catcgcttcg ttgggcggca gggcagggct gttgtccgta
    63481 accggcaacg acgaagccgc cgacgcgctc gatgcgctga tggtgcagga cggcgtcgcc
    63541 tcctatctga tgcgcgacaa acaaatcgcc accaccgtca aactgcgcgt cgtcgcccgc
    63601 aaccagcagc ttatccgtct tgattttgaa gaacatccca actgcgaagt gttggaacaa
    63661 atcaagcaga aataccgcga aatcttgccc gaatacgacg caatcatttt ttcagactac
    63721 ggcaaaggcg gcctgtcgca tatctccgat atgatcgatt gggcgaaaca cgccggcaaa
    63781 accgtcttaa tcgaccccaa aggcgacgat tacgaaaaat atgtcggtgc aactctgatt
    63841 acgcctaacc gcgccgaatt gaaagaagtg gtcggcagtt ggaaaaacga aagcgagctg
    63901 accgaaaaag cgcaaaacct gcgccgccac ctcgacctga ccgccgtttt actgacccga
    63961 agcgaagaag gcatgacctt gttcagcgaa ggcgaaccga tttaccagcc cacccgcgcc
    64021 caagaagttt acgacgtatc cggtgcgggc gacaccgtca ttgccggaat gggcttgggt
    64081 ttggcggcag gctgcaccat gcccgaagcc atgtaccttg ccaatactgc ggccggggtt
    64141 gtcgtggcga aactcggtac ggcggtttgc tcgtttgccg aattgatcaa ggcattgtca
    64201 gggcaatcaa caatgtagtt ttcatattga taagataaac agaacgatat aagtatgact
    64261 atttcgacaa tggcacagac acacgatact cgattacaaa aaactttgct ctttcccagt
    64321 caacaaggtt ggaaatctaa aacttttctt aaacctgatt cacatattag attagcaacc
    64381 gtattcagcg ggattggtgc ggttgaacag gcattccacc gattaaattt aaaccatacc
    64441 attgtttttg caggagatat tgatccatac gttaaaaaaa gttatcttgg aaactataaa
    64501 ttaaatgaag atttttggca taacgacatt actcaatttg atgcgagaaa gtttagaaat
    64561 caagttgata ttttagttgg aggcagtcct tgccaagcat tttccatggt tggcaaacgt
    64621 gcaggattag aagatacacg aggaacatta ttctatgaat tttctcgcgt tgtggatgaa
    64681 gtccaaccaa agatatttat ttatgaaaat gtaaagggct tgctcaatca tgataatgga
    64741 aaaacttgga aagttgtaaa aagtgttttt tattcacttg gttatgactt atatttccaa
    64801 ataatgaata gtaaggatta tgggattcct caacatcgtg agcgtatttt tgttgttggc
    64861 tttcataccc ctcctataaa tggttttcag tttcctgaaa agattgaatt agaacatact
    64921 atgcaagatt ttttggagga ctatactgat agcaaatatt ttttacgtga aaagggtgtg
    64981 aaatttgtta ccagttctaa aaatagacaa aaacgttata cacagattaa tggagaaatt
    65041 gccttatgcc aaaaagcaaa tcaacaattt aattggcatg gtgattttat ttttcaggca
    65101 gcccgcgaat ctgaatttga tgactttatt tttgatgtaa ataacgttga ggaaaaatat
    65161 tatctttctg aaaaaatcaa aaattatgtt ttggcaggag gaacaaaaaa ttttaaaacc
    65221 agtacggaaa ctgatttgcc tgtagctcgc ccattattgc aaactatgca taaaatgcat
    65281 cgtgccgggg ttgataatta tgttactcat aatcgtggac gtattcgtaa attaacacct
    65341 agggaatgtt tgcggctaat gggttttaga gatgatttta aaattttagt tagtgatact
    65401 caaatgtatc gccaagcggg aaacagtatt gttgttgatg tattaatcgc tatattaaaa
    65461 caaatggata ttacgcttta tggagagtaa aatgccggat tttcaaagaa ttactattga
    65521 aaacatagag tattttattg tcgatagtat tcaaaattta cgtgcggaag atagttttat
    65581 tcacaggaat aacaagttat ctgtttttgg tggtaatggg gaagcacgca aatatgtagg
    65641 tagttatatt gatgatagtg gtcgaaaact aagtacattt tttgagtatg aaaattgggg
    65701 gattactgag acaaaaaatg gaaggagggt agaatatcct ctcattcaga aaaattgttt
    65761 ttttaataag aaaaatttac agcgttattt ggttgatgca aaagttgaat atcacaaaca
    65821 agaacagaaa tatcatcatg atatttcaag gttttatgat gattacgttt taagtattaa
    65881 taatctgcct acagaaaata ttttcttttc aatccatgat gtatcagacc atttggaaaa
    65941 ttctaaaggt taccgtaggg gttatatccg ttcggaggat gatatatggt caatttggcg
    66001 taagattgta ttgcccaaaa ttagttattt atcaattctt aaactattgc ctgtcaaaga
    66061 tatagaagat tcagaaccat tattttattt ccgaatattt ttggattatc aatttcgctc
    66121 tatcgtgcac ccgcaactct tatcaagaga aaaattagaa ataccggctt cagaatttaa
    66181 tcaattcgta gagcaagaaa tcattaaaca gaaaagtaga aaagggcagc agaaatatcg
    66241 caaggatgtt ataaatcata tgccgcaatg tccatttaca ttaattacag atgaggtttt
    66301 gttaagggct agtcatatta aaccttatat ggtttgtatt actgagaaaa atgagaaaga
    66361 ggcattagat tatttaaatg ggttagcttt aacgccgact tatgattggt tgttcgatca
    66421 aggttatatt actttcttgg atgatggtcg tttgatttgc ggtactcgac taagccgtta
    66481 cacatgggaa aaacttaata tcaatccaaa tgcaaaaaat aagatgagaa tatatcccga
    66541 aggaagagaa aaatatttgg aatatcatcg caaatttgtg tttcaggaca atatcgatga
    66601 tttcttgtaa ctaagtttat taattttact caaaacaaag gaaaccgaat atgaccatca
    66661 tcgtaacagg cgcggccggc tttatcggca gcaacatcgt caaagcactt aatcaacgcg
    66721 gtattaccga catcgtcgcc gtcgataatt tgagcaaagg cgaaaaattc aaaaaccttg
    66781 ccgagtgcga aatcgcccat tatctcgaca aacacgaatt catccgccaa gtgagggaac
    66841 acattttacc ttatcaaaac atcgaagccg ttttccatca aggcgcgtgt tccgatacga
    66901 tgaaccacga cggtttgtat atgatggaaa acaactacca gtacacgctg gatttgttga
    66961 actggtgtca ggacgaacgc attcccttcc tttatgcctc cagtgcggcg gtttacggca
    67021 aaggcgaaat cttccgcgaa gagcgcgaac tcgaaaaacc gcttaatgtg tacggctact
    67081 ccaaattcct gttcgaccaa gtattgcgcc gccgcatgaa agaaggtctc accgcccaag
    67141 tcgtcggctt ccgctacttc aacgtttacg gacaacacga acaacacaaa ggccgcatgg
    67201 catccgtcac cttccaccat ttccaccaat accgcgaaca cggttacgtc aacctgttcg
    67261 gcagcaatga cggttacggc aacggcgaac aaacccgcga ctttgtcagc gtcgaagacg
    67321 ttgccaaagt caacctctac ttcttcgacc atcccgaact ttccggcatc tacaacctcg
    67381 gtaccggccg cagccaacag tttaacgaac tcgccgccgc caccgtcaac gcctgccgcg
    67441 ccgccgaagg caagcctgaa atgagcttga aagagctggt ggaagaagaa cttatccgct
    67501 acatcccctt ccccgacgca ctcaaaggca aataccagag cttcacccaa gccgacatca
    67561 ccaaattgcg tgaggcaggt tatacggaag aatttttcga tgtcaaatca ggcgtcgagc
    67621 gctacgtcaa atggatgctg gaaaatttgg cttaatttga atgcccgtaa aaaatcgtct
    67681 gaaaatatca ggcgattttg atttgtttaa cttttatatg gatttcgatg atgaccgaaa
    67741 tgcaacaacg cgcccaactg caccgccaaa tttggaaaat tgccgacgaa gtacgcggcg
    67801 cggtggatgg ctgggacttt aaacaatacg ttctcggcac acttttctac cgctttatca
    67861 gcgaaaactt caccgactat atgcaggcag gcgacagcag tattgattac gccgctatgc
    67921 cggacagcat catcacgccc gaaatcaaag acgatgccgt caaagttaaa ggctatttca
    67981 tctaccccag ccagcttttt tgcaatattg ccgccgaagc ccatcaaaac gaagagctca
    68041 acaccaagct gaaagaaatc tttaccgcga ttgaaagctc cgcctccggc tatccgtccg
    68101 aacaagacat taaaggcctg tttgacgact tcgataccac cagcagccgg ctcggcagca
    68161 cagttgccga caagaacaaa cgccttgccg ccgtcctcaa aggcgtggcg gaacttgatt
    68221 tcggcagttt tgaagaccac cacatcgacc ttttcggcga tgcctacgaa tacctgattt
    68281 ccaactacgc cgccaacgca ggcaaatccg gcggcgaatt tttcaccccg caaagcgtat
    68341 ccaagctgat tgcgcggctg gcggtgcacg ggcaggagaa agtaaacaaa atctacgacc
    68401 cagcttgcgg ctcgggcagc ctgctcttgc aggcgaaaaa acagtttgac gagcacatca
    68461 tcgaagaagg cttcttcggg caggaaatca accacaccac ctacaacctc gcccgcatga
    68521 atatgtttct gcacaacgtc aattacaaca aattccacat cgaattgggc gacacactga
    68581 ctaatcccaa gctcaaagac agcaaaccct ttgatgccat cgtttccaat ccgccttatt
    68641 ccatcaactg gataggcagc gacgacccca ccttaatcaa cgacgaccgc tttgcccccg
    68701 caggcgtact cgcaccgaaa tccaaagccg attttgcctt catcctgcac gcactgaact
    68761 acctttccgg cagaggccgc gccgccatcg tctctttccc cggtattttc tatcgcggcg
    68821 gcgcagagca gaaaatccgc caatatctgg tggagggcaa ctacgtggaa accgtgattg
    68881 cccttgcgcc caatctcttt tacggcaccg gcatcgccgt caatatcctg gttttgtcca
    68941 aacacaaaga caataccgac atccaattta tcgacgcagg cagcttcttt aaaaaagaaa
    69001 ccaacaacaa cgtcttaacc gaagaacaca ttgccgacat cgtcaaactc ttcgccgaca
    69061 aagccgatgt gccgcatatc gcccaaaacg ctgcccagca aaccgtcaaa gacaacggct
    69121 acaacctcgc cgtcagcagc tatgttgaac ccgaagacac acgcgaaatt atcgacatca
    69181 aacagcttaa cgccgaaatc ggcgaaaccg tcgccaaaat cgaacggctg cggcgcgaaa
    69241 ttgacgaagt gattgcagag attgaggcct aggcagttgt tgcatatttt gcaacaactg
    69301 aatgggaaag aggccgtctg aaaatacggg cggtaacctg taagtaatct ttacaagttc
    69361 aaatcaagaa attttcgggg aaaaatacat gacaacagaa aacaacgctt ttgaaaacgc
    69421 caaacacatc gacgaaacag gcaatgaata ttggtcggtg tgcaccttgc agacaaagta
    69481 gggtgggctt cagccccccg aaacaacggc aaaacagcag gcggattgtt gggctggagc
    69541 ccaccctacg gcggataacc gccccacatc ccgccgcagc gggaaagaaa cggaaaacaa
    69601 ccatggatat acaaagtaaa gcgaaaaaat tgattgagat gattcagacg gcaccggtgg
    69661 agtggaagcc gttgggggaa gtggcaagta taggaaaggg aaagcagctt aataaatcac
    69721 tacttagaga aaaagataag tatcccgtaa tcaatggcgg tattaatcca tcaggttatt
    69781 ggcatgaata caataacgaa gctggcacga ttgttattag ccaaggagga gcaagtgcgg
    69841 ggtttgttaa ttggatggat atcccttttt ttgcaggagc tcacgcatat actattaaag
    69901 cgaacgaaga caaactattg caacggtttg catattattt ttaaaaatga agcaaattac
    69961 attcatgcaa tgtcaatacg gagcaggtat accagcactt gctaaaagtg aattgcaaaa
    70021 cttacttatt cccatcccgc ccctagaaac ccaacaaaaa attgtaaaaa tacttgacaa
    70081 attcaccgag ctggaagcgg aattagccct gcgcaaacgc caataccggt attaccgcga
    70141 ctttctttta gattttgaca atcaaatcgg ggggggggat agctgatggc tatcaatgcc
    70201 gtctgaaaga tgtggtttgg aagacgttgg gggagattgc cgaatattca aaaaaccgta
    70261 tttgttcgga taaactgaac gaacataatt acgtgggcgt ggataatctc ttacaaaata
    70321 gagaaggtaa aaagttatcc ggttatgttc caagtgaggg aaaaatgaca gaatatattg
    70381 ccaatgacat cttgattgga aatattcgtc cgtatttgaa aaaaatctgg caggcagact
    70441 gcacgggcgg aacaaacggt gatgttttgg ttatccgggt aacagatgaa aaggttaatc
    70501 caaaatatct gtatcaggta ttggccgatg ataaattttt tgcctttaat atgaagcacg
    70561 ccaaaggtgc aaaaatgccg cgtggcagca aagcagcgat tatgcaatat aaaatcccca
    70621 tcccaccact ccccgaacag gaaaaaatcg tcgccatcct agacaaattc gacaccctga
    70681 cccactccgt cagcgaaggc ctgccgtacg aaatcgccct gcgccgcaaa caatacgaat
    70741 attaccgcga acagctgctt gcctttcggt agggtgggct tcagcccacc gaaacagcag
    70801 caagctgcaa caacagtaaa acaacggcag gcggggcggt gggctgaagc ccaccctacg
    70861 gcgagcggca accgccccgc attccgccac agcgtgtgga aaccggaaaa tatggcggcg
    70921 gatgctcaaa acaaagagaa aaaaccgatt gagatgattc agacggcatc ggtggggtag
    70981 aagtcgcaga caaagtaggg tgggcttcag cccaccgaaa cagcagcaag ctgcaacaac
    71041 agtaaaacaa cggcaggcgg ggcggtgggc tgaagcccat cctacgatgg acacaaccga
    71101 cccgcattcc gccgcagcca accaaagcag cctgcacatt ttcaggcagc ccaatccgaa
    71161 catcaaaccg tttatagtga attaaattta aatcaggaca aggcggcgag ccgcagacag
    71221 tacaaatagt acggcaaggc gagccaacgc agtaccggtt taaatttaat tcactataaa
    71281 acccgacacc gcaaaggacg acccatatga acctcgaaac taaacccatc gccgaaacgc
    71341 cgaatttcat cgtgctcgac caatatgaaa aaatcgaaca gtcgggcagc taccaatcgg
    71401 aaaaccagtt ggaagcggag ttaatcgccg atttgcagaa tcagggttac gaataccgca
    71461 aggatttgaa cagccaaagc aggctgctgg aaaacctgcg cgcgcagttg cagcggctga
    71521 acgatgtggc gttttcagac ggcgaatggg cgcggttttt gacggaatat ctggacaggc
    71581 cgtctgaaaa cattaccgat aaaacccgaa aaatccacga cgaccatatt tacgatttcg
    71641 cttttgatga cggccgtctg aaaaatattt atctgctgga caaaaaaaac cttgcccgca
    71701 accatgtgca gcttatcaac cagtttgagc agacgggcac gcatgcaaac cgctatgacg
    71761 ttaccgtgtt ggtaaacggc ttgccgctgg tgcagattga attgaaaaag cgcggcgtgg
    71821 cggtgcgcga ggcattcaat caggtgcacc gttacagcaa agagagcttc aacagcgaaa
    71881 attcgctgtt caaattcctg caaatcttcg tgatttccaa cggcacggat acgcgctatt
    71941 tcgccaacac caccaagcgc gacaaaaaca gcttcgattt cacgatgaat tgggcgcggt
    72001 cggacaatca tccgattaag gatttgaaag actttactgc cacgttcctg cagaaaagcg
    72061 tattgctggg cgttttgctg cattacagcg tgttcgatgc gaatgatacg ctgctgatta
    72121 tgcggccgta ccagattgcc gccgccgaac gcattttgtg gaaaatcaac agttcggcgc
    72181 aggcgaagaa ttggagcggg ccggaaagcg gcggctatgt ctggcacacc acgggcagcg
    72241 gcaaaacgct gaccagcttc aaggcggcgc gtctggcgac ggaatcggcg tttatcgaca
    72301 aggttttctt cgtggtggac aggaaggatt tggactatca gacgatgaag gaataccaac
    72361 gtttttcgac cgacagcgtg aacggttcgg aaagcacggc gggcttgaaa cgcaatttgg
    72421 aaaaagacga caacaaaatc atcgttacca ccatccagaa gctgaacaac ctgatgaaga
    72481 gtgaagataa tctgccggtt tatcaccagc aagttgtctt tattttcgac gaatgccacc
    72541 gttcgcaatt cggcgaagcg caaaaaaacc tgaaaaagaa atttaaaaaa ttctgccagt
    72601 tcggttttac cggtacgccg atttttcatg accatatcgt tgatggcaaa ctgattatga
    72661 aaggcaatgc gcttggttcg gagagtacgg aaagcgtatt tgggagacag ctgcattctt
    72721 atgtgattac cgatgccatc cgcgatgaaa aagtattgaa attcaaagtg gattacaacg
    72781 atgtgcgccc gcagttcaaa gccgtggaag cggaacagga cgagaagaaa ctgagtgccg
    72841 ccgaaaaccg ccaagccctg ctgcatcctg aacgcatccg cgaaatcacg caatatatcc
    72901 tgaaccagtt caggcagaaa acacaccgct tgaatgcggg cggcaaaggc tttaacgcca
    72961 tgtttgccgt cagcagcgtg gatgcggcga agtgctatta cgaagcgttc aaaacacaac
    73021 aggcaggcag cctgcacccg ctgaaagtgg ccaccatttt ttcctttgcc gccaacgaag
    73081 agcaaaacgc cgtcggtgaa attgccgatg aaacctttga accggaagcg atggacagca
    73141 gcgcaaaaga atttttgcag gctgccatca acgattacaa cgcctgtttc aaaaccaatt
    73201 tcggcacgga cagcaaagcc tttcagaact actaccgcga tttggcaaaa cgggtaaaaa
    73261 atcaggaagt ggatttgctg attgtggtcg gcatgttttt gacgggtttt gacgcgccga
    73321 cgctgaacac gctgtttgtc gataaaaacc tgcgctatca cggcctgatg caggcgtttt
    73381 cgcgcaccaa ccgcatttac gatgccacca aaaccttcgg caacattgtc tgcttccgcg
    73441 atttggagca ggcaaccatt gatgcgatta ccttgtttgg cgacaaaaac accaaaaatg
    73501 tagtgctgga aaaaagttac gaagaataca tgaacggcta taccgacagc cagaccggcg
    73561 aagcgcgacg cggctatttg gatgtggcaa aagaattgca cgagcgtttc cccgatcccg
    73621 acaaaatcga aacggaaaaa gacaaaaaag attttgccaa actcttcggc gaatacctgc
    73681 gggcggaaaa cgtattgcag aactacgatg aatttgccgc gctgcgcgag ttgcagagtg
    73741 tggacgcggc ggacgaagat gcgatgaagg cgtttcaaga aaaatactac ctgagcgatg
    73801 aagacgtgca ggaaatgcgg caagtgccga tgccgtctga aagggcggtg caggactacc
    73861 gttccgccta caacgacatc cgcgattggt tgcgccgcca aaaagcaggc gaacagaaag
    73921 aacagtcaaa aatcgactgg gacgatgtgg tttttgaggt ggatttgctc aaatcgcagg
    73981 aaatcaatct ggattacatc ttgcaactga ttttcgagca tcacaaaaaa atcaaaggca
    74041 aagcggagct ggtggaagaa atccgccgta tcatccgcgc cagtatcgga caccgcgcca
    74101 aagagagcct gattgtggat ttcatcaacg atacggattt ggataaagtc cccgatgttc
    74161 ccgccatact ggaaaccttc tacacctacg ctcaagaggt gatgaggaat gaagccgcag
    74221 agctgattgc cgccgaaggt ttgaacgaaa ccgccgccaa acgctattta atcagctcgc
    74281 tcaaacgcgg ctatgccagc gaaaacggta cggaactgac cgaaaccatg ccgaaaatga
    74341 gtccgctcaa cccgcaatat ctgacgaaga aacaaagtgt ttttcaaaag attgcggcgt
    74401 ttgtggagaa gtttgccgga atagggacag atatttgaca aaatgccgtc tgaacctttc
    74461 agacggcatt tttgatttta tgcggaggcg gtttttattt tgaccttgct tttcttaaac
    74521 ttcaacacgg cttcttcttt tgccgcatcc cagtctatcc gcacgaagcc gccgtcggat
    74581 agtttgccga acaggagttc gtcggcgagc ggtttgcgga ttttttcctg aatcaggcgg
    74641 tgcatcgggc gcgcgcccat ttgcgggtcg aaaccttttt ccgccagata tttgtgcaat
    74701 gccgacgtga attcggcttc gacttttttg tcgaggagct ggtgttcgag ctggagcagg
    74761 aatttgtcca cgactttgac gatgatgggt tcggacaagg gtgcaaacgg gataatcgcg
    74821 tccaagcggt tgcggaactc gggcgtgaag agcttgttga ttgcctgcat ttcgtcgccg
    74881 cgttcgcgct tggcggtaaa gccgaggctg gggcggctga ggctttccgc gcctgcgttg
    74941 gtggtcataa tcaggatgac gttgcggaaa tcggcactct tgccgttgtt gtcggtcagt
    75001 ttgcctgcgt ccatgacttg caggaggacg ttgaaaatgt cggggtgggc tttttcgatt
    75061 tcgtccaaga gcaatacgca atgcggctgt ttgttgacgg cttcggtcaa aaggccgcct
    75121 tgttcaaagc cgacgtagcc cggtggcgcg ccgatgaggc gcgatacggc atggcgttcc
    75181 atgtattcgg acatatcaaa gcgttgcagc ggtacgccca gcgagtaggc aagctgtttg
    75241 gcggcttcgg ttttgcccac gccggtcggg ccggagaaga ggaagctgcc tatcggtttg
    75301 tcgggcaggg caaggccgga acgcgacatt ttgacggcgg caaccagcgc gtcgatggcg
    75361 ttttcttgac cgtaaaccat gtttttcaaa tcgcgaccga ggaattgcag cacttgtttg
    75421 tcgtcgtgcg acacggtttt ttcgggaatc cgcgcaactt tggcgatgac ggtttcaatt
    75481 tgtgctttgc cgatgacttt tttctgtttg gatttgggca gaatccgttg cgccgcgcct
    75541 gcttcgtcca tcacgtcgat ggctttgtcg ggcaggaaac gctcgttgat gtagcgtgcg
    75601 gagagttcgg cggcggcttc gagtgcgcct tgcgtatagc ggacttggtg gaaggcttca
    75661 aacatcggct tcaagccgcg caggatttgt acggtttcgg aaacggtggg ttcgaccacg
    75721 tcgatttttt ggaagcggcg gcttaaggcg tggtctttgt cgaaaatggt gcggtattcg
    75781 tcgtaagtgg tcgcgccgat gcagcgcagc gaaccttttg ccagcgcggg tttgagcagg
    75841 ttggacgcgt ccatggtgcc gccgctggtg ctgcctgcgc cgatgatggt gtggatttcg
    75901 tcgataaaca aaatggcgtg cgggattttt tcgagctgtt tcaagacgga tttgacccgc
    75961 gcttcaaagt cgccgcggta tttcgtgccc gccaacagcg agcccatatc cagcgcgtac
    76021 acttcggcat ctttgagcgc gtctggaatg ccgccgttga cgatttgatg tgccaaacct
    76081 tccgccagcg cggttttgcc cacgcccgct tcgccgacca aaagcggatt gtttttgcgg
    76141 cggcggcata ggatttgcac cagccgttcc atttcgtgtt tgcgaccaat caaagggtcg
    76201 atacggccgg ctttgacttc ggcgttgagg ttgacggtgt acgccgataa agggtttttg
    76261 cccggtttgg tgcggttttc attatcgtcg tccatgccgt ctgaagaata gttgccatcg
    76321 tcttcatctt catcgggaga gccgtgggca atacagcgca aaacttcaaa acgcgtaacc
    76381 gattgcagct tgaggaaata gacggtgtgg ctgtcggttt cgctcatcag cgcgaccaaa
    76441 acgtccaacg gttcgactgc ggcttttccg gcagactggg tatgcaccat cgcccgttgc
    76501 atcacgcgtt ggaagccgag cgtgggccgt gtttcgaccg tgtctaaaag gtgttcggga
    76561 atcagggggg tgttttcggc aacgctggcg gcgagctgtt cggacaccac tttcaaatcc
    76621 gcgccgcaga gttttaagac gttcggcacg gaggcatctt cttcgatgag taccaaaagc
    76681 agatgctcga ggctgataaa ttcataatga gccttacgcg cctcgcggta aagctgctgc
    76741 aaaatctgtt ccaattcggg tgcaagcata ttaaatctcc tcgacaatac attgcagcgg
    76801 atgcccttcg gcttttgccc gctgcatgac ttgttgctgt ttggtttggg caatatcgcg
    76861 cgtgtaagtg ccgcacaggc ctttgccttc gtgatgaacc aagagcatta ccgctaccgc
    76921 ctgttcttgt ccgagcatga agatttcggt caggatttca acgacaaatt ccatcgtggt
    76981 gtaatcgtcg ttcaatagga aaacgccgta acgtttcggc ggcagggtgt tcagacggtg
    77041 caagagcgtg tcggattggt gttgcgcggt catagtgtgt cccatttgaa agccgcgttc
    77101 agacggcatt tttgttgtat tttcggtact tttgcctatt ttcccacttt tttgaaaaca
    77161 tagcttgacg ttttgtctta acaaatgtaa aaagacggtt aagcaggatt gggcatccgc
    77221 cgagtatatc aagctggaag gaacgccaga cggctcggtt tgccgtatgc cttgttttgc
    77281 tgattttgtt aatttttgag tataggaagt ttctaatggc aaccggtatc gtaaaatggt
    77341 ttaacgacgc taaaggtttt ggtttcatca cgcctgatga aggcggcgaa gatttgttcg
    77401 ctcacttctc agcaatcaat atggaaggtt tcaaaaccct gaaagaaggc caacgcgtct
    77461 ctttcgacgt aaccaccggc cctaaaggca aacaggccgc caacattcag gctgcttaat
    77521 tcctgatgta cggtcaaatg tatatttgaa aacggcggga caggcaatgt cccgccgttt
    77581 ttgtctgccg ttttgccggc ggcggaaaaa ccccaatccc cgcacgcctt atcctgaact
    77641 tgtgtgtacc ctgttgtgga caagtggctt agtattttga cggataaggg aaaatcagtg
    77701 ctgatgaaaa aatgtgcaat gttgtcggca aaaggcggtg cggcataaaa cggcaaacgg
    77761 gcaggcacgg ggcaaaacgt gctgccttcg tcttcagacg gcatcggcag ggcgttcagc
    77821 ttccggcaac cgtcatcccc gcaatcagaa tcgagccgat tttgttggac gaacgccgca
    77881 aagcgtcatc cgccacgccg acaatgtcgc ggtacatatc ctgcaagcgt ccggctacgg
    77941 taatctcgtg gacggggtag gcaatcacgc cgttttccac ccaaaaaccc gccgcgccgc
    78001 gcgagtagtc accggtaatg gtgttcgcgc cctgtcccat cagttcggta accaataatc
    78061 ccgtccccat ttctttcagc aggtcggatt gcgtttcgtg cgtatggttc aaatacaggt
    78121 tgtgcgcgcc gccggcgttg cccgtggtct gcataccgag tttgcgcgcg ctgtaactgc
    78181 tgaggaaata gccttcgacg atgccgtcgc ggataacgaa acgcggccgc gtggcgacgc
    78241 cttcggaatc gaaataggtg ctgccgaagg cgcggggaat atgcggctct tcgcgcaggc
    78301 tgaggaaatc gggcagaacc tgtttgccta tgctgtcgat caggaagctg ctttggcggt
    78361 agagcgagcc gccggacagt gcgccgacga ggtgtccgat cagacctccc gaaacggtcg
    78421 catcgaatag gacggggtag cttccggtcg gaatgctgcg gctgttcaga cgacgtaagg
    78481 tacgttcggc ggcggtttga ccgatttgcg tcgggctgtc catgtcttga tggcggcagg
    78541 aggaatcgta ccagtagtcg cgctgcatgc cgttttcgtc ggcggcaacg acgctgcatg
    78601 aaatgctgtg gcgtgtgcct tgctggtgtg cggcaaaacc gtgggtgttg ccgtaaacgt
    78661 attggtaatg tccggtttgc accgccgccc cttcggagtt ttcgatgcgc tcatcctcgt
    78721 tcagggcggc ttgttcgcat tgttttgcca actcgacggc ggcttccgta tccaaatccc
    78781 attcgtggta aaggtcgggg tcgccgatgt gttgcgccat aagcgaagcg tctgccaaac
    78841 ctgcgcaatc gtcttcggcg gtgtagcggg cgatgtcgat ggcggctttg acggtgtctt
    78901 gcagggcttt ttcggagaag tcggcagtgc tggcgcggcc tttgcgtttg ccgacgtaaa
    78961 cggtaatgtc cagcgacttg tcctgctgga actcgatttg ttcgatttcg cccagccgca
    79021 cgctgacgct ttgtcccaat gattcgctga aatcggcttc ggcggcggtc gcgcccgctg
    79081 cttttgccaa gtcgagcgtg cggcggcaga ggtcgagaag ttcggaagcg gtgtggttga
    79141 acagcataga aatctttctt ggtggagcgt tgcggcattt taaccgtttc gggcggcagg
    79201 ggcaaaagcg tgccgtttgc agggcggacg gtgcaaaatg ccgtctgaac gcggaatcat
    79261 tctgttaaaa tgcgcccgtc ggataaaatt tgagaatgaa gatgtttgaa caagaagacg
    79321 aatgggtcag caaaacccaa atgaaaaagc agatgaacgg tttgcaggat ttgggtatgg
    79381 agctgaccaa gctctcaagc gacacgttga aaaaaatcgg cttggacgaa gatttgtacg
    79441 aagccgtcgt tacctataaa aaaatcacat ccaacggcgc gctcaagcgg caggcgcaat
    79501 ttatcggcag actgatgcgc gataccgatc ccgcgcccat cgaggcattt cttgccaagc
    79561 tgcgcggcga cgatgcggtg cacaatgcct ttttgcaacg cgtggaacag gcgcgcgtac
    79621 ggctgttggc agacgacggc gcgttgatgc agtttatgtc ggattttccg catgcggacg
    79681 cgggcaagct gaggacgctc gtccgcaaca ccaaaaaaga gcaggagcaa aacaaaccgc
    79741 cgaaaaactt ccgcgcgctg tttcaagaat tgaaaaccgt gatggaaaac ggggacgcgg
    79801 aaatttaggc atattttcag acgacatccg ccgttattta gattggagga taaaatgttg
    79861 ttccgtaaaa cgaccgccgc cgttttggcg gcagccttga tgttgaatgg ctgtacggca
    79921 atgatgtggg gcatgaacga cccgttcagc caaacgaccg cctataaaca cgttgacaag
    79981 gatcaaatcc gcgccttcgg tgtggttgcc aaagacaatg cccaattgga aaagggcagt
    80041 ctggtgatga tgggcgggaa atactggttc gtcgtcaatc ccgaagattc ggcgaagctg
    80101 acgggcattt tgaaggcagg gctggacaaa cccttccaaa tagttgagga taccccgagc
    80161 tatgctcgcc accaagccct gccggtcaaa ctcgaatcgc ctggcagcca gaatttcagt
    80221 accgaaggcc tttgcctgcg ctacgatacc gacaagcctg ccgacatcgc caagctgaaa
    80281 cagctcgggt ttgaagcggt caaactcgac aatcgaacca tttacacgcg ctgcgtatcc
    80341 gccaaaggca aatactacgc cacaccgcaa aaactgaacg ccgattacca ttttgaacag
    80401 agtgtgcctg ccgatattta ttacacggtt actgaaaaac ataccgacaa atccaagctg
    80461 tttgcaaata tcttatatac gccccctccc tttttgatac tggatgcggc gggcgcggta
    80521 ctggccttgc ctgtcgcggc gttgattgca gccacgaatt cctcagacaa atgaacggca
    80581 atgccgtctg aaaagccttc agacggcatt tcaaacacat ccgcactgta aagttccacg
    80641 ctatgtccgt caaaatccaa acccgatccg tcaataccga cgttttcaat catttgctca
    80701 ccgccggcgc cgatccttta atcgcccggc tttgtgcctc gcgcggtgtg caaagtcctg
    80761 ccgaattgga cgacaaactc gcttccctcc tgccttatca aacgctgacg aattgcgaag
    80821 ccgccgcccg ccgtttggcg gatgcggttg agcgtcagga aaaaatcttg attgtcgccg
    80881 actacgatgc cgacggcgcg accgcgtgtg ccgtcggttt ggacggtttg gcggcgatgg
    80941 gggcaaaagt agatttcctc gtgcccaacc gctttgaaca cggctacggt ttaacgcccg
    81001 agctggccga aatcgccgcc gcgcaaggcg tggatttgct gattacggtc gataacggca
    81061 ttgccagcat cgcaggcgtg gcgcgtgcgc aggaattggg tttggatgtg attgtaaccg
    81121 accaccatct gcctgccgag accgtgccag actgcatcat cgtcaatccg aaccaaaaag
    81181 gctgcggttt ccaaagcaaa agcttggcgg gcgtgggcgt gattttttat gtactgatgg
    81241 ctttgcgtgc cgaactgcgc cgccgcaatt atttttcaga cggcctaaaa gagccgaatc
    81301 tgggcgacct tttggatttg gtcgcactcg gtaccgttgc cgacgtcgtc tccctcgatc
    81361 acaacaaccg tatcctcgtg tcgcaaggtt tgaaacggat gcgttcgggc aaaatgcgcc
    81421 ccggtatccg cgccttgttt gaagtggcgc ggcgcgactg gcgcaaagcg cagccgtttg
    81481 atatgggctt tgcgttgggg ccgcgcatca atgccgccgg acggttggac gatatgtcgg
    81541 tcggcattgc ctgtctgttg gcgcgagatg atgtggaagc gcaggaactg gcggctcagt
    81601 taaacaacct caatatcgag cgtcgcgaaa tcgagcagtc tatgctgcaa gacgcgctga
    81661 atgcttttcc tgaaaccctg ccttcaggtc agacgacttt ggtggcgtat cgcgacgact
    81721 tccatcaagg tgtggtcggc attgtcgcca gccgcctcaa agaccgtttt tatcgtccga
    81781 ccatcgtgtt tgcgcctgcc gacaacggcg aagtacgcgg ttcgggacgt tccattccca
    81841 atttgcacct gcgcgatgct ttggacttgg tgtccaaacg ccatcccgat ttgattttga
    81901 aattcggcgg acacgcgatg gcggcgggtt tgagcatact tgaacacaac attcccgcgt
    81961 ttcagacgtc ctttgaagaa gccgtgcgcg aaatggtgtg cgaagacgat ttgtcgcaaa
    82021 ccttcatcac cgacggcagc ctgcccgcct gcgacatcac gttggaacag gcgcaaaacc
    82081 ttgcccgtca cgtttggggg cagggcttcg cgccgccgag ctttaccgac gagttccacg
    82141 tcgtccgcca gcaacctttg ggcgcggagg gcaaacacaa aaaagtctgg ctgcaaaaag
    82201 acggctgcga atttgaagcc atgttttggc gttgcagcga agacatcccc gaatacatcc
    82261 gcacggttta ccgccccgtt gccaacgaat ggcgcaacaa tctcgaattg cagctgtata
    82321 tcgattactg ggaagcggtg tagaggcggc ggaacgccgt ttgaatgtga tttctgttcc
    82381 ttcatttgcc tgtttgtacg acgggaatgt tcccaatcgg aaaagaaagt aaagggcgtt
    82441 aatttttgtt aatcatccct tcttagggac gcaatatata aggtgcatca aatttcagac
    82501 tccggcggat ttgcatttga agtgcaactt tccctaacag aaaaaggcca gtatgcggta
    82561 gcatacg
//
LOCUS       DBBZXU010000002        56504 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.002, whole genome shotgun sequence.
ACCESSION   DBBZXU010000002 DBBZXU010000000
VERSION     DBBZXU010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 56504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 56504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..56504
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.002"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACJJDE_000088"
     CDS             complement(104..1891)
                     /gene="lpdA"
                     /locus_tag="ACJJDE_000088"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7540099.1"
                     /translation="MALVELKVPDIGGHENVDIIAVEVNVGDTIAVDDTLITLETDKA
                     TMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAEGTAAAPKAEAPAAAPAQEAPKAA
                     APAPQAAQFGGSADAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNV
                     GCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDMLRAYKDGVVSRLTGGLAGMAK
                     SRKVDVIQGDGQFLDPHHLEVSLTAGDAYEQAATTGEKKIVAFKNCIIAAGSRVTKLP
                     FIPEDPRIIDSSGALALKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ
                     GADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLV
                     AAGRAPNGKLISAEKAGVAVTDRGFIEVDKQMRTNVPHIYAIGDIVGQPMLAHKAVHE
                     GHVAAENCAGHKAYFDAHVIPGVAYTSPEVAWVGETELSAKASGRKITKANFPWAASG
                     RAIANGCDNGFTKLIFDAETGRIIGGGIVGPNGGDMIGEVCLAIEMGCDAADIGKTIH
                     PHPTLGESIGMAAEVALGTCTDLPPQKKK"
     gene            complement(1909..2346)
                     /locus_tag="ACJJDE_000089"
     CDS             complement(1909..2346)
                     /locus_tag="ACJJDE_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540100.1"
                     /translation="MGNFLYRGISCQQDEQNNGQLKPKGNKAEVAIRYDGKFKYDGKA
                     THGPSVKNAVYAHQIETGLYDGCYISTTTDKEIAKKFATSSGIENGYIYVLNRDLFGQ
                     YSIFEYEVEHPENPNEKEVTIRAEDCGCIPEEVIIAKELIEIN"
     gene            complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="ACJJDE_000090"
     CDS             complement(2440..4038)
                     /gene="aceF"
                     /locus_tag="ACJJDE_000090"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HGG7540101.1"
                     /translation="MSIVEIKVPDIGGHENVDIIAVEVKAGDTIAVDDTLITLETDKA
                     TMDVPADAAGVVKEVKVKVGDKISEGGVILTVETGASAAEAAPAVAAEAQPAPAAAPV
                     AAGGATVQVAVPDIGGHTDVDVIAVEIKVGDTVAEDDTLITLETDKATMDVPCTAAGV
                     VKAVFLKVGDKVSEGSAIIEVETAGSVAAAPAQAAQAAAPAPTAAAAPAAAPAPSAPA
                     AAKIDEAAFAKAHAGPSARKLARELGVDLGQVKGTGLKGRIVGDDIKAFVKSVMQGGA
                     AKPAAAGASLGSGLDLLPWPKVDFSKFGNVEVKELSRIKKISGQNLSRNWVVIPHVTV
                     HEEADMTELEEFRKQLNKEWEREGVKLSPLAFIIKASVSALKAFPEFNASLDGDNLML
                     KNYFNIGFAADTPNGLVVPVIKDVDQKGLKQISQELTELSKKAREGKLKPQEMQGACF
                     TISSLGGIGGTGFTPIVNAPEVAILGVCKSQIKPVWNGKEFAPRLMCPLSLSFDHRVI
                     DGAAGMRFTVFLAKLLKDFRRITL"
     gene            complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="ACJJDE_000091"
     CDS             complement(4188..6851)
                     /gene="aceE"
                     /locus_tag="ACJJDE_000091"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HGG7540102.1"
                     /translation="MSTQLHDVDPIETQEWLDALSSVLEYEGGERAQYLLENLVKYCR
                     DKGVRMPHGTTTPYLNTVSVENEKGIPGDQNIEHRIRAFVRWNAAAIVLRAGKKDLEL
                     GGHIASFQSAATMYEVGFNHFWKAKGEGEEGDLVFFQGHVAPGIYARAFVEGRLTEDQ
                     LNNFRQEVDGHGLPSYPHPHLLPDFWQFPTVSMGLGPIMAIYQARFLKYLESRGLAKT
                     KGRKVWCFCGDGEMDEPESQGAIALAAREGLDNLIFVINCNLQRLDGPVRGNGKIIQE
                     LEGNFAGAGWNVVKVIWGRRWDRLLAKDKDGILRQRMEECLDGDYQTYKSKDGAYVRE
                     HFFNTPELKALVADMTDEQLWALNRGGHDPQKVYNAYDRAANHADGKPTVILAKTIKG
                     YGMGASGEGQNVAHQAKKMDKASLKQFRDRFDIPVTDEQIESGDLPYLTFAPDTEEYK
                     YLHARRDALGGYLPQRKPTQEVLEVPELSAFDAQLKSSGEREFSTTMAFVRILSTLLK
                     DKKIGKRVVPIVPDESRTFGMEGMFRQYGIWNPKGQQYTPQDKDQLMFYKESVDGQIL
                     QEGINEPGAMADWIAAATSYANSNFAMIPFYIYYSMFGFQRIGDLAWAAGDMHARGFL
                     LGGTAGRTTLNGEGLQHEDGHSHIQADLIPNCVSYDPTFQYEVAVIVQDGLRRMYANN
                     EDVFYYITLMNENYTHPDMPEGAEQDILKGMYLLKAGGKGDKKVQLMGSGTILQEVIA
                     GAELLKADFGVEADIWSCPSFNLLHRDAVEVERFNRLHPLEAEKVPFVTSKLQGHDGP
                     VIAATDYIRSYADRIRAYIPNDYHVLGTDGFGRSDSRANLRRFFEVDRYNVAVAALAA
                     LAEQGKVSKETVQQAIEKYGIKADSAPSWKR"
     gene            7545..9257
                     /locus_tag="ACJJDE_000092"
     CDS             7545..9257
                     /locus_tag="ACJJDE_000092"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HGG7540103.1"
                     /translation="MKASQFFISTLKEAPAEAALASHKLMIRAGLIKANASGLYTWMP
                     MGLRVLRKVENVVREEMARAGSVELLMPVVQPAELWQESGRWEFYGKELLRLKDRHDR
                     DFCMGPTCEEVIADIVRKEINSYKQLPKNFYHIQTKFRDEVRPRFGVMRAREFVMKDA
                     YSFHADYASLQTTYDAMYDAYCRIFTRLGLAFRPVAADTGSIGGTGSHEFQVLAESGE
                     DVIAYSDTSDYAANIELAPTLPLKGERTAAQAELTKVHTPNVKTIESLVEFLNIPVEQ
                     TLKSIVVEGENEGEIVLLLLRGDHEFNDIKAEKLAGVRSPLTMASPAAIVEQFGANGG
                     SLGPVSFAGKVYADFATEKGADWVIGANEDGYHYTSFNFGRDAAEPEFVDLRNVVEGD
                     ESPDGQGRLKLARGIEVGHVFQLRDKYTQAMNVSFLDNNGKSQIMEMGCYGIGITRVV
                     AAAIEQNNDEKGIIWTKAMAPFEVVIVPMNYKKSDTVREAADKIYAELLAAGADVLLD
                     DRDERAGVLLNDSELLGIPHRIVIGDRALKEGNVEYAERRNNEAQAVAIGEIVARVTA
                     LLNG"
     gene            9320..9976
                     /locus_tag="ACJJDE_000093"
     CDS             9320..9976
                     /locus_tag="ACJJDE_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HGG7540104.1"
                     /translation="MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKP
                     SGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGTGEGKDILGCVAGYGVGLDLTA
                     RDIQCRLKEKGLPWLKAKGFRHSACVSDFAAAGRIGNPENVLFSLKQNGVLKQRGDTG
                     LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVRASFTVGC
                     "
     gene            complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="ACJJDE_000094"
     CDS             complement(9986..10441)
                     /gene="ruvX"
                     /locus_tag="ACJJDE_000094"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HGG7540105.1"
                     /translation="MHKIPKGTALAFDFGEARIGVAQGDAELGLSHPLSTVTGGSNDE
                     KFAAIAKLVQEWQPRYFVVGLPVHTDGTKHEMTHLSRKFGRRLNGRFNLPVYWVDERL
                     SSVYAESLLSEAQVFGKKRKSVLDQVAAQAILHGFFEGGPAECFNGREG"
     gene            complement(10434..10982)
                     /locus_tag="ACJJDE_000095"
     CDS             complement(10434..10982)
                     /locus_tag="ACJJDE_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HGG7540106.1"
                     /translation="MNLSNHFLVAMPDMEDAFFSQSVVYICKHDEDGALGIAINKPSP
                     ITMDMIFSATGKNIPMRMQHDSVMMGGPVQVERGYVVHTPIGNWQSSIGVSDNIALTS
                     SRDVIENISREGAVDKALISIGYSSWGKGQLERELADNAWLTVPADEHILFDIPYEHR
                     YAAAFAKLGIDPLALFSGAGHA"
     gene            complement(10984..11544)
                     /locus_tag="ACJJDE_000096"
     CDS             complement(10984..11544)
                     /locus_tag="ACJJDE_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CreA family protein"
                     /protein_id="HGG7540107.1"
                     /translation="MNRLLLLSAAVLLTACGSGETDKIGRASTVFNILGKNDRIEVEG
                     FDDPDVQGVACYISYAKKGGLKEMVNLEEDASDASVSCVQTASSISFDETAVRKPKEV
                     FKHGASFAFKSRQIVRYYDPKRKTFAYLVYSDKIIQGSPKNSLSAVSCFGGGIPQTDG
                     VQADTSGNLLAGACMISNPIENPDKR"
     gene            11872..13677
                     /locus_tag="ACJJDE_000097"
     CDS             11872..13677
                     /locus_tag="ACJJDE_000097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7540108.1"
                     /translation="MRYKPLLLALMLVFSTPAVAAHDAAHNRSAEVKKQTKNKKEQPE
                     AAEGKKEKGKNGAVKDKKTGGKEAAKEGKESKKTAKNRKEAEKEATSRQSVRKGHEGD
                     KKSKAEHKKAHGKPVSGSKEKNAKTQPENKQGKKEAKGQGNPRKGGKAEKDTVSANKK
                     VRSDKNGKAVKQDKKYREEKNAKTDSDELKAAVAAATNDVENKKALLKQSEGMLLHVS
                     NSLKQLQEERIRQERIRQERIRQARGNLASVNRKQREAWDKFQKLNTELNRLKTEVAA
                     TKAQISRFVSGNYKNSQPNAVALFLKNAEPGQKNRFLRYTRYVNASNREVVKDLEKQQ
                     KALAVQEQKINNELARLKKIQANVQSLLKKQGVTDAAEQTESRRQNAKIAKDARKLLE
                     QKGNEQQLNKLLSNLEKKKAEHRIQDAEAKRKLAEARLAAAEKARKEAAQQKAEARRA
                     EMSNLTAEDRNIQAPSVMGIGSADGFSRMQGRLKKPVDGVPTGLFGQNRSGGDVWKGV
                     FYSTAPATVESIAPGTVSYADELDGYGKVVVVDHGENYISIYAGLSEISVGKGYMVAA
                     GSKIGSSGSLPDGEEGLYLQIRYQGQVLNPSSWIR"
     gene            13797..15281
                     /locus_tag="ACJJDE_000098"
     CDS             13797..15281
                     /locus_tag="ACJJDE_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HGG7540109.1"
                     /translation="MSKPVFKKIALYTLGAISGVAVSLAVQGFAAEKDRRDNEVLPVQ
                     SIRTMAEVYGQIKANYYQDKPDADLFEGAMKGMVAGLDPHSEYMDKKGYAEIKESTSG
                     EFGGLGMEIGQEDGFVKVVSPIEDTPAERAGVKSGDFIVKIDNVSTRGMTVSEAVKKM
                     RGKPGTKITLTLSRKNADKPIVVNLTRAIIKVKSVRHHLIEPDYGYIRVSQFQERTVE
                     SVNTAAKELLKENKGKPLKGLVLDLRDDPGGLLTGAVGVSAAFLPSEAVVVSTKGRDG
                     KDRMVLKAIPEDYVYGMGGDSLAGIPAELKTIPMTVLVNSGSASASEIVAGALQDHKR
                     AVIVGTQSFGKGSVQTLIPLSNGSAVKLTTALYYTPNDRSIQAQGIVPDVEVKDKERI
                     FESREADLVGHIGNPLGGEDVNSETLAVPLEKDADKPAVKEKGKKKKDEDLSSRRIPN
                     PAKDDQLRKALDLVKSPEQWQKSLGLAAKKPVSNKDKKDKKDKK"
     gene            15610..17637
                     /gene="uvrB"
                     /locus_tag="ACJJDE_000099"
     CDS             15610..17637
                     /gene="uvrB"
                     /locus_tag="ACJJDE_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HGG7540110.1"
                     /translation="MEVIRYPDSPFKLHQPFPPAGDQPTAIADLLEGLSDGLAYQTLL
                     GVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLYAEMREFFPENAVEYFVSYYDYY
                     QPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
                     QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENAL
                     RISLFDDEIDRLDMFDPLSGSLHQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRER
                     IDFFTKENRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFSGKKEGEPPPTLMDY
                     LPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVM
                     PQTVFVSATPAKYEEEHAGQVVEQVVRPTGLVDPQIIIRPVATQVDDLMSEINDRIQK
                     GERVLVTTLTKRMAEQLTDYYSELGIKVRYLHSDIDTVERVEIIRDLRLGLFDVLVGI
                     NLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYADKITDSM
                     KAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRRQGKNKVKV
                     GEIHNEEDTIKEIAKLEKAMQQAARDLQFEEAAVLRDRIRNIKESLLFGAE"
     gene            17673..18557
                     /locus_tag="ACJJDE_000100"
     CDS             17673..18557
                     /locus_tag="ACJJDE_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540111.1"
                     /translation="MTSIILELQSLAANPNSDVEELVSKTLMVARKLKINELTEWCNN
                     ELQGYSSKNLPKYRIFYGELKAFNPYRGDVPFMLPDELRERVTRVEYTSSISEIRNLL
                     KTKNNNFIRILSSKEKQFLMNLQDTPFPLEPKIIIYPINLMNIQSKVRQLILAWALRL
                     EEEGILGDGIQFTKSKQEKAMSNQFNIQNMQGFIGDIFGGNVQQNIQDGIHIEKENFN
                     KLANFLAKNGIPSAELEDLRNALIEDGQPTDKKFGSKVSAWIGNIITKASTGAIDVSV
                     GTIAGILTNAISKYYGLM"
     gene            18784..19275
                     /locus_tag="ACJJDE_000101"
     CDS             18784..19275
                     /locus_tag="ACJJDE_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7540112.1"
                     /translation="MKYRRFYRNGGTYFFTVVANKRQKILTDDAVRLALRQAVMAVRE
                     RYPFEILAWVLMPDHLHTIWRLPDNDSAYSERWRQIKRHSQYLIGGKLRLWQKRFWEH
                     TIRDEADFACHFDYLHFNPVKHGYVGQISDWRFSTFHRYVKQGIYPHNWGGGNADFSI
                     GYD"
     gene            19347..19508
                     /locus_tag="ACJJDE_000102"
     CDS             19347..19508
                     /locus_tag="ACJJDE_000102"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540113.1"
                     /translation="MRWLNLKNSTSVHNTQGIRTKEAVEQGLRGNNRPEKGIGNRWNY
                     DGFIKELAK"
     gene            19558..19842
                     /locus_tag="ACJJDE_000103"
     CDS             19558..19842
                     /locus_tag="ACJJDE_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540114.1"
                     /translation="MKVITITLFTSCILSGCYGLEYGMSGGIPHDDWARGSHVSQAKA
                     DAAWKECSDKYMRNGGSGLVEQCMNDKGLIRLSEIRRRQKRAETQRAVIK"
     gene            complement(19967..20683)
                     /gene="trmB"
                     /locus_tag="ACJJDE_000104"
     CDS             complement(19967..20683)
                     /gene="trmB"
                     /locus_tag="ACJJDE_000104"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HGG7540115.1"
                     /translation="MTDTAENQTQNNWQAEHPRSIRSFVLRQSHMTSAQQRAIDTLWG
                     SFGIDYQATPADLDARFGSSRPKILEIGFGMGTATAEIARRLPETDFLAIDVHGPGVG
                     NLLKLIEENHLENIRVMRHDAVEVVENMLQDGSLDGIHIFFPDPWHKKRHHKRRLIQA
                     PFIAKLLPKLKTGGYIHLATDWEEYAQQMLEVLSSFDSLQNTAADYAPTPDYRPETKF
                     EARGKRLGHGVWDLVFKRIG"
     gene            complement(20805..22208)
                     /locus_tag="ACJJDE_000105"
     CDS             complement(20805..22208)
                     /locus_tag="ACJJDE_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7540116.1"
                     /translation="MNNPDLLYHQALERLSQEQYDFTEVRRLLTEAASAGHPAAAFEL
                     AKHLMDADSPHQDREQGMEMLRIAAEQGHPYARYNLAYIQELEGARPETLIPLYRPLA
                     EEGLPEAQVRLMYLLYASRHFEEALKWAKTTAKNNNPHGQYLLAQYCQYGTPPDFETA
                     HLLYREAAAQGLAAAQWQLGLQYRFGQGTPTDTTQAINHLRAAAQQGYIPAYTPLAEL
                     ILPTAPDEAVYRFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERHP
                     EGLRILGDICRYSLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPNQYGGIK
                     DSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFG
                     QGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVGPDNEKACRYLQEAINSGH
                     EQKSFLQELLQQWQNAV"
     gene            complement(22327..24213)
                     /gene="uvrC"
                     /locus_tag="ACJJDE_000106"
     CDS             complement(22327..24213)
                     /gene="uvrC"
                     /locus_tag="ACJJDE_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HGG7540117.1"
                     /translation="MPSETVFQVIDMNKETRFPEHFDIPLFLKNLPNLPGVYRFFNES
                     GNVLYVGKAVNLKRRVSGYFQKNDHSPRIALMVKQVHHIETTITRSESEALILENNFI
                     KALSPKYNILFRDDKSYPYLMLSGHQYPQMAYYRGTLKKPNQYFGPYPNSNAVRDSIQ
                     VLQKVFMLRTCEDSVFEHRDRPCLLYQIKRCSAPCVGHISEEDYHDSVREASTFLNGK
                     TDELTRTLQHKMQTAAANLQFEEAARYRDQIQALGIMQSNQFIDSKNPNNPNDIDLLA
                     LAVSDGIVCVHWVSIRGGRHVGDKSFFPDTKNDPEPNGQDYAEAFVAQHYLGKSKPDI
                     IISNFPMPDALKEALESEHGKQMQFVTKTIGERKVWLKMAEQNAQMAIAQRRLQQSSQ
                     QHRIDELAKILGMDSDGLNRLECFDISHTQGEATIASCVVYDEQNIQPSQYRRYNITT
                     AKPGDDYAAMREVLMRRYGKMQEAEANGETVKWPDVVLIDGGKGQIGVAVSVWEELGL
                     HIPLVGIAKGPERKAGMEELILPFTGEVFRLPPNSPALHLLQTVRDESHRFAITGHRK
                     KRDKARVTSSLSDIPGVGSKRRQALLTRFGGLRGVVAASKEDLEQVEGISKALAETIY
                     EHLH"
     gene            complement(24277..26439)
                     /locus_tag="ACJJDE_000107"
     CDS             complement(24277..26439)
                     /locus_tag="ACJJDE_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7540118.1"
                     /translation="MQQKIRFQIEGMTCQACASRIEKVLNKKDFVESAGVNFASEEAQ
                     VVFDDSKTSVADIAKIIEKTGYGAKEKTEDTLPQPEAEHHIGWRLWLLFTINVPFLIG
                     MAGMMIGRHDWMIPPLWQFALASVVQLWLTIPFYKSAWASIKGGLANMDVLVTIGTVS
                     IYLYSVYMLFFSPHAAHGMAHVYFEAGVMVIGFVSLGKFLEHRTKKSSLNSLGLLLKL
                     TPTQVNVQRNGEWKQLPIDQVQIGDLIRANHGERIAADGIIESGSGWADESHLTGESN
                     PEEKKAGGKVLAGALMTEGSVVYRATQLGSQTQLGDMMNALSEAQGSKAPIARVADKA
                     AAVFVPAVVGIALLTFIVTWLIKGDWTVALMHAVAVLVIACPCALGLATPAAIMVGMD
                     KAVKHGIWFKDAAAMEEAAHVDAVVLDKTGTLTEGRPQVAAVYCVPDSGFDEDDLYRI
                     AAAVEQNATHPLARAIVSAAQTRSLEIPAAQNAQTVVGAGIAAEVEDVGLVKAGKAEF
                     AELTLPEFSDGVWDIASIVAVSVDNKPIGAFALADALKADTAEAIGRLKKHNIDVYIM
                     SGDNQGTVEYVAKQLGIAHAFGNMSPRDKAAEVQKLKAAGKTVAMVGDGINDAPALAA
                     ANVSFAMKGGADVAEHTASATLMQHSVNQLADALLVSQATLKNIKQNLFFAFFYNILG
                     IPLAALGFLNPVIAGAAMAASSVSVLSNALRLKRVKID"
     gene            26578..27528
                     /gene="trxB"
                     /locus_tag="ACJJDE_000108"
     CDS             26578..27528
                     /gene="trxB"
                     /locus_tag="ACJJDE_000108"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADPH) activity [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0019430 - removal of superoxide radicals
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HGG7540119.1"
                     /translation="MSQHRKLIILGSGPAGYTAAVYAARANLNPVIITGIAQGGQLMT
                     TTEVDNWPADADGVQGPELMARFLAHAERFGTEIIFDQINAVDLQKRPFTLKGDMGEY
                     TCDALIVATGASAKYLGLPSEEAFAGKGVSACATCDGFFYKNQDVAVVGGGNTAVEEA
                     LYLANIAKTVTLIHRRSEFRAEKIMIDKLMKRVEEGKIILKLESNLQEVLGDDRGVNG
                     ALLKNNDGSEQQIAVSGIFIAIGHKPNTDIFKGQLEMDEAGYLKTKGGTADNVGATNI
                     EGVWAAGDVKDHTYRQAITSAASGCQAALDAERWLGSQNI"
     gene            27684..28052
                     /gene="rpsF"
                     /locus_tag="ACJJDE_000109"
     CDS             27684..28052
                     /gene="rpsF"
                     /locus_tag="ACJJDE_000109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HGG7540120.1"
                     /translation="MRHYEIVFIVHPDQSEQVPAMVERYKTMIAEANGKIHRLEDWGR
                     RQLAYPINKIHKAHYVLMNIETTPEVVEELETAFRFNDAVLRHLTIKTKHAVTEASPM
                     LGGEKAKNLLSGASEEAAAQ"
     gene            28053..28355
                     /gene="priB"
                     /locus_tag="ACJJDE_000110"
     CDS             28053..28355
                     /gene="priB"
                     /locus_tag="ACJJDE_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030894 - replisome [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HGG7540121.1"
                     /translation="MGFNNLVSLAALIEKVFPIRYTPAGISVLDIILKHESWQEENGQ
                     QCLVQLEIPARILGRQAEEWQYRQGVYVHVEGFLAQKSRRSLMPMLRIQNIQEYKG"
     gene            28362..28592
                     /gene="rpsR"
                     /locus_tag="ACJJDE_000111"
     CDS             28362..28592
                     /gene="rpsR"
                     /locus_tag="ACJJDE_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009120066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HGG7540122.1"
                     /translation="MARQSFKRRKFCRFTAEKIQEVDYKQVDLLKDFISENGKIIPAR
                     ITGTKAFYQRQLAVAVKRARFLALLPYTDQHK"
     gene            28609..29061
                     /gene="rplI"
                     /locus_tag="ACJJDE_000112"
     CDS             28609..29061
                     /gene="rplI"
                     /locus_tag="ACJJDE_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HGG7540123.1"
                     /translation="MQIILLEKIGGLGNLGDIVTVKNGYARNFLIPAGKAKRATEANM
                     KEFEARRAELEAKQAEILADAQARQEKLDGQTITVAQKAGVDGRLFGSVTNADIAAAI
                     VATGIEAVKANVRLPNGPLKAVGEYEVEVALHTDAVAKITVAVVAATE"
     gene            complement(29254..30060)
                     /locus_tag="ACJJDE_000113"
     CDS             complement(29254..30060)
                     /locus_tag="ACJJDE_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7540124.1"
                     /translation="MWHWDIILILLAVGSAAGFIAGLFGVGGGTLIVPVVLWVLDLQG
                     LAQHPYAQHLAVGTSFAVMVFTAFSSMLGQHKKQAVDWKTVFTMMPGMVFGVFAGALS
                     AKYIPAFGLQIFFILFLTAVAFKTLHTDPQTASRPLPGLPGLTAVSTLFGTMSSWVGI
                     GGGSLSVPFLIHCGFPAHKAIGTSSGLAWPIALSGAISYLLNGLNIAGLPEGSLGFLY
                     LPAVAVLSAATIAFAPLGVKTAHKLSSAKLKKSFGIMLLLIAGKMLYNLL"
     gene            complement(30061..30807)
                     /gene="pssA"
                     /locus_tag="ACJJDE_000114"
     CDS             complement(30061..30807)
                     /gene="pssA"
                     /locus_tag="ACJJDE_000114"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003882 - CDP-diacylglycerol-serine
                     O-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HGG7540125.1"
                     /translation="METPTNTPQRSLRQNSIYLLPNSFTIAALFSAFYAITQSMHGRY
                     ETAAIAVFISMLLDGMDGRVARLTNSQSAFGEQLDSLADMVSFGVAPALIAYKWQLWQ
                     FGKIGYSVAFIYCACAALRLALFNTLIGKVDKRWFIGVPSPTAAALIVGLIWVNHSVE
                     KFPAVHWWALGITLFAGLSMIVQIPFWSFKEINIRRQVPFVGMLLAVLLLLLVTWEPS
                     LVLFLFFLGYSLSGYIMAARRFWKKYRKAD"
     gene            complement(30881..31285)
                     /locus_tag="ACJJDE_000115"
     CDS             complement(30881..31285)
                     /locus_tag="ACJJDE_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540126.1"
                     /translation="MANRFQQRKSAYRRLSGKPLFSDGIAANLCGGRKTLSYNLSRFK
                     ISIRSEMQKISFNLLKPANSPKIGKRRPGLNGAPHIPMPSPRYLPASPEMPGNNIHPA
                     KIRNNTPGGRQSQTAPQSIRHQKNKPPPRASS"
     gene            31391..31873
                     /locus_tag="ACJJDE_000116"
     CDS             31391..31873
                     /locus_tag="ACJJDE_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4189 domain-containing protein"
                     /protein_id="HGG7540127.1"
                     /translation="MMKKILAVSALCLMTAAARAADTYGYLAVWQNPQNADDVLQVKT
                     TKEDSTKSEAFSELEAFCKGQDTLAGIAEDEPTGCRSVVSLNNTCVALAYPKALGALR
                     VDNAVVITSPRFTSVHQVALNQCIKKYGVQGQCGLETVYCTSSSYYGGTVRSLIQNLK
                     "
     gene            complement(31925..33136)
                     /locus_tag="ACJJDE_000117"
     CDS             complement(31925..33136)
                     /locus_tag="ACJJDE_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-xanthine permease family protein"
                     /protein_id="HGG7540128.1"
                     /translation="MNQLKLAVSGAQILFVAFGAMVLVPLLTGLNPALALLGAGLGTL
                     LFQITTKRKVPIFLGSSFAFIAPIIYSIGEWGLPSTMFGLFAAGFMYFVFAVLIRWRG
                     LAAVHKLLPPVVIGPVIMVIGLSVAVAASSMAMGQADGKQVIDYTDSLILSGFTFAVT
                     AIVSVFGSRMMKLIPILIGVASGYVLALLMGLVDTASIAHAPWFAVPHFETPQVNWQA
                     ALFMLPVAVAPAIEHIGGIMAIGNVTGKDYTKDPGLDKTLAGDGLGVCVAGLIGGPPV
                     TTYGEVTGAVMITKNSNPVIMTWAAVFAVCMAFFGKFNAFLASIPMPVMGGIMLLLFG
                     TIASLGVKTLIDAKVDLMLPKNLVIVSSVLTTGIGGMTLKLGSFSFAGVGLCAVLAIM
                     LNSLLPDPKES"
     gene            33359..35797
                     /locus_tag="ACJJDE_000118"
     CDS             33359..35797
                     /locus_tag="ACJJDE_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7540129.1"
                     /translation="MTEKSHKKTAKGRAGSPSPTSARNKKADNGARGNKVSERLKAVK
                     ELQKTETKKARPEHVVNLIGDALWLMGLAATLYLAISLISFDMGDPSWSHSSPVVEDV
                     ANWGGLFGAYVADVGYYLFGWSFWWWIAAACVVLYKNFRLHAKQTENEAYNHKIAAAA
                     LFVLTVFSPVLEYFVLGGKYADSLPVGAGGMVGIRVGAVFAWLLGKSGSLLIILVVLL
                     LSLSLLVQISWLEFLNGAGRAVQNRLSALSGKVMALGKRRPNTKTDGVDTQNTRRMVK
                     EAKNITAKPVALPEGSSSNRKSVAVSVAPPPKIQVSLFEDDEPRQAGEYHKPTLNLLR
                     IPDSEPVSINPAELERTAELIESKLAEFGIGVQVVSATSGPVITRYEIEPAQGVKGSQ
                     IVALSKDLARSMSLQSVRIVETIAGKNTMGIELPNDKRQDVMLSEILSSPVFAEAKSK
                     LTVALGKDIAGTPVVGDLAKMPHLLVAGMTGSGKSVGVNGMIMSMLFKATPDEVRFIM
                     IDPKMLELSIYDGIPHLLCPVVTDMREAGQALNWCVAEMEKRYRLLSHAGVRNLEGFN
                     QKVEAAKAAGKPLLNPFSLNPDEPEPLEKLPLIVVVIDELADLMMTERKAVEQQIARL
                     AQKARAAGIHMIVATQRPSVDVVTGLIKANIPTRMAFTVQSKIDSRTILDQMGADELL
                     KYGDSLFLQPGSAEPTRLQGAFVSDDEVHQVVNYVKSQAPADYIEGLLSGEAALETAN
                     IVNPNADSDELFDQAVAYVLESKKTSISSLQRQLRIGYNRAANLMEALENAGVVSPTD
                     LNGSRKILAHKDHL"
     gene            36005..37315
                     /gene="tig"
                     /locus_tag="ACJJDE_000119"
     CDS             36005..37315
                     /gene="tig"
                     /locus_tag="ACJJDE_000119"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HGG7540130.1"
                     /translation="MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGF
                     RPGKAPLKMIAQMYGASAQNDVINELVQRRFYDVAVAQELKVAGFPRFEGVEEQDDKE
                     SFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAQ
                     NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNF
                     PEDYHGKDVAGKTAMFTITLNNVSEATLPEVDADFAKALGIADGDVAKMREEVKKNVS
                     REVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQNFVNQGMADAANL
                     DLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWY
                     YAEPSRLQAPTSLAIESNVVDFVLGKAKVNEKALSFDEVMGAQA"
     gene            37411..38025
                     /gene="clpP"
                     /locus_tag="ACJJDE_000120"
     CDS             37411..38025
                     /gene="clpP"
                     /locus_tag="ACJJDE_000120"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009368 - endopeptidase Clp complex
                     [Evidence IEA];
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HGG7540131.1"
                     /translation="MSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDES
                     ANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAAS
                     MGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLM
                     AKHCGRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLQF"
     gene            complement(38082..39347)
                     /gene="ispG"
                     /locus_tag="ACJJDE_000121"
                     /gene_synonym="gcpE"
     CDS             complement(38082..39347)
                     /gene="ispG"
                     /locus_tag="ACJJDE_000121"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity (ferredoxin) [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HGG7540132.1"
                     /translation="MNTLQRRKTHQVRIDHITVGSEAPVVIQSMTNTDTADAKATALQ
                     IKELSDAGSEMVRITVNSPEAASKVAEIRRRLDDMGYATPLIGDFHFNGERLLAEFPE
                     CGKALSKYRINPGNVGKGVKGDEKFAFMIRTAAENDKAVRIGVNWGSLDQSLAKRMMD
                     ANLAFSAPKPPEEVTKEALIVSALESAEKAVLLGLPEDKIILSCKVSAVQDLIQVYRE
                     LGSRCAYPLHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRISLTPEPGSPRTQEV
                     VVGQEILQTMGLRSFTPMVTACPGCGRTTSTVFQELAQDVQNYLRQKMSIWRTLYPGV
                     ESLNVAVMGCVVNGPGESKLADIGISLPGTGETPVAPVYVDGERKVTLKGDNIATEFL
                     AIVEEYVKTNYGENGSKRNQNKIIPIQSL"
     gene            complement(39363..40124)
                     /gene="pilW"
                     /locus_tag="ACJJDE_000122"
     CDS             complement(39363..40124)
                     /gene="pilW"
                     /locus_tag="ACJJDE_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis/stability protein PilW"
                     /protein_id="HGG7540133.1"
                     /translation="MPFKPSKRISLLLVLALGACSTSYRPSRAEKANQVSNIKTQLAM
                     EYMRGQDYRQATASIEDALKSDPKNELAWLVRAEIYQYLKVNDKAQESFRQALSIKPD
                     SAEINNNYGWFLCGRLNRPAESMAYFDKALADPTYPTPYIANLNKGICSAKQGQFGLA
                     EAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK
                     IAKALGNAQAAYEYEAQLQANFPYSEELQTVLTGQ"
     gene            complement(40127..41221)
                     /gene="rlmN"
                     /locus_tag="ACJJDE_000123"
     CDS             complement(40127..41221)
                     /gene="rlmN"
                     /locus_tag="ACJJDE_000123"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0030488 - tRNA methylation [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HGG7540134.1"
                     /translation="MKTNLLNYDLQGLTRHFADMGEKPFRAKQVMRWMHQSGAQNFDE
                     MTDLAKSLRHKLNEQAGIEIPKLMMSQKSSDGTRKWLLDVGTGNGVETVFIPESDRGT
                     LCISSQVGCALECTFCSTGRQGFNRNLTAAEIIGQLWWANKAMGVTPKNERVISNVVM
                     MGMGEPMANFDNVVTALSIMLDDHGYGLSRRRVTVSTSGMVPQMDRLRDVMPVALAVS
                     LHASNDEVRNQIVPLNKKYPLKELMAACQRYLVKAPRDFITFEYVMLDGINDKAQHAR
                     ELIELVTDVPCKFNLIPFNPFPNSGYERSSNENIRVFRDILQQAGFVVTVRKTRGDDI
                     DAACGQLAGQVQDKTRRQQKWQQILIGQQG"
     gene            complement(41365..41790)
                     /gene="ndk"
                     /locus_tag="ACJJDE_000124"
     CDS             complement(41365..41790)
                     /gene="ndk"
                     /locus_tag="ACJJDE_000124"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HGG7540135.1"
                     /translation="MAIERTISIIKPDAVGKNVIGKIYSRFEENGLKIVAAKMKQLTL
                     KEAQEFYAVHKDRPFYAGLVEFMTGGPVMIQVLEGENAVLKNRELMGATNPSEAAEGT
                     IRADFATSVSINAVHGSDTPENAALEIAYFFSQTEICPR"
     gene            complement(41849..43000)
                     /gene="zapE"
                     /locus_tag="ACJJDE_000125"
     CDS             complement(41849..43000)
                     /gene="zapE"
                     /locus_tag="ACJJDE_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HGG7540136.1"
                     /translation="MSSRDQLFKAPPFENHSPLTWYQAASQLPNFIRDDAQAAAIEHL
                     DRLWTELMMFKRKRNRFLGRSLRSPQVPKGLYFYGGVGRGKSFLMDAFFGCLPYRRKR
                     RVHFHAFMAEIHRRLKTLKSESNPLKSVAAEIAKETRVLCFDEFHVSDIADAMILGRL
                     LENLLNEGVVLVATSNYAPSELYPQGQNRSSFLPTIALIESSLTVLNVDGGEDYRLRT
                     LRPAEIFFTPANEENEAKLAKLFKEMTGITDLNPGISTIHGREIPHKAESGRAIWFDF
                     RALCFGPRSQSDYLYLAEHYEMVFISGLEQLSPQEKAEARRLTWLIDVLYDFRVKLCA
                     TGAVDVNHIYTEGDFAEEFTRTASRMVEMQSEVYLEQPHLTLSPKASGG"
     gene            complement(43175..43284)
                     /locus_tag="ACJJDE_000126"
                     /pseudo
     CDS             complement(43175..43284)
                     /locus_tag="ACJJDE_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(43391..44218)
                     /gene="fghA"
                     /locus_tag="ACJJDE_000127"
     CDS             complement(43391..44218)
                     /gene="fghA"
                     /locus_tag="ACJJDE_000127"
                     /EC_number="3.1.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011961786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018738 - S-formylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0046294 - formaldehyde catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HGG7540137.1"
                     /translation="MKLIEQHQIFGGLQQVWAHYAQTLQCEMKFAVYLPNNPENRPLG
                     VIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPNDAAYDLGQGAGF
                     YLNATEQPWVTNYQMYDYILNELPSLIEEKFPTNGKRSIMGHSMGGHGALVLALRNRE
                     RYQSVSAFSPILSPSLVPWGEKAFSAYLGKNREKWQQYDADSLIRQGCKVQGMRIDQG
                     LEDEFLPTQLRTQDFIETCRAANQPADVRFHKGYDHSYYFIAGFIGEHIAYHAAFLK"
     gene            complement(44227..45336)
                     /locus_tag="ACJJDE_000128"
     CDS             complement(44227..45336)
                     /locus_tag="ACJJDE_000128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000842106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase (NAD+)
                     activity, zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0051903 - S-(hydroxymethyl)glutathione
                     dehydrogenase [NAD(P)+] activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S-(hydroxymethyl)glutathione dehydrogenase/class
                     III alcohol dehydrogenase"
                     /protein_id="HGG7540138.1"
                     /translation="MKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDA
                     FTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVSSVKPGDHVIPLYTAECGECEFCCSGK
                     TNLCVSVRDTQGKGLMPDGTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEAN
                     HEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVFGLGAIGLAVVQGARQAKAGRIIAID
                     TNPAKFELAKQFGATDCLNPNDYDKPIKDVLLDINKWGIDHTFECIGNVNVMRQALES
                     AHRGWGQSIIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGVKGRSELPKMVEDSMKGD
                     IELEPFVTHTMTLDQINEAFDLMHEGKSIRAVIHY"
     gene            45484..45891
                     /locus_tag="ACJJDE_000129"
     CDS             45484..45891
                     /locus_tag="ACJJDE_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HGG7540139.1"
                     /translation="MTYTTAKAAEKIGISAHTLRFYDKEGLLPNIGRDEYGNRCFTDN
                     DLQWLGLLQCLKNTGMSLKDIKRFAECTVIGDDTIEERLSLFENQIENVKCQIAELKR
                     YLDLLEYKLAFYQKAKALGSVKAVNLPQIPETA"
     gene            complement(46242..46556)
                     /locus_tag="ACJJDE_000130"
     CDS             complement(46242..46556)
                     /locus_tag="ACJJDE_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HGG7540140.1"
                     /translation="MTKSELMVRLAEVFAAKNGTHLLAKDVEYSVKVLVDTMTRSLAR
                     GQRIEIRGFGSFDLNHRPARIGRNPKTGERVEVPEKHVPHFKPGKELRERVDLALKEN
                     AN"
     gene            complement(46567..48252)
                     /gene="rpsA"
                     /locus_tag="ACJJDE_000131"
     CDS             complement(46567..48252)
                     /gene="rpsA"
                     /locus_tag="ACJJDE_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HGG7540141.1"
                     /translation="MSMENFAQLLEESFTLQEMNPGEVITAEVVAIDQNFVTVNAGLK
                     SESLIDVAEFKNAQGEIEVKVGDFVTVTIESVENGFGETKLSREKAKRAADWIALEEA
                     MENGDILSGIINGKVKGGLTVMISSIRAFLPGSLVDVRPVKDTSHFEGKEIEFKVIKL
                     DKKRNNVVVSRRAVLEATLGEERKALLENLQEGSVIKGIVKNITDYGAFVDLGGIDGL
                     LHITDLAWRRVKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQLGEDPWSGLTRRYP
                     QGTRLFGKVSNLTDYGAFVEIEQGIEGLVHVSEMDWTNKNVHPSKVVQLGDEVEVMIL
                     EIDEGRRRISLGMKQCQANPWEEFAANHNKGDKISGAVKSITDFGVFVGLPGGIDGLV
                     HLSDLSWTESGEEAVRKYKKGEEVEAVVLAIDVEKERISLGIKQLEGDPFGNFISVND
                     KGSLVKGSVKSVDAKGAVIALSDEVEGYLPASEFAADRVEDLTTKLKEGDEVEAVIVT
                     VDRKNRSIKLSVKAKDAKESREALNSVNAAANANAGTTSLGDLLKAKLSGEQE"
     gene            complement(48408..49064)
                     /gene="cmk"
                     /locus_tag="ACJJDE_000132"
     CDS             complement(48408..49064)
                     /gene="cmk"
                     /locus_tag="ACJJDE_000132"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - (d)CMP kinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HGG7540142.1"
                     /translation="MNRQKVIAIDGPGASGKGTVAARVAAALGYDYLDTGALYRLTAL
                     YAQKQGVGWHDEENVSELAKKLPAVFSGSRILLGGEDVSDGIRTEAIGMGASAVAQLP
                     KVRAALLQRQRDFLTEKGLVADGRDTGSVVFPQAELKIFLTAESKIRAERRAKQIGIP
                     CEGLAFERILSDIEARDEADRNRKVAPLKQQPDALLLDTSRLTIEETVKKVLDWYRKV
                     "
     gene            complement(49308..50623)
                     /locus_tag="ACJJDE_000133"
                     /pseudo
     CDS             complement(49308..50623)
                     /locus_tag="ACJJDE_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519747.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
     gene            complement(51149..51841)
                     /locus_tag="ACJJDE_000134"
     CDS             complement(51149..51841)
                     /locus_tag="ACJJDE_000134"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0140098 - catalytic activity, acting on
                     RNA [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase"
                     /protein_id="HGG7540143.1"
                     /translation="MKLIKYLQYQGIGSRKQCQWLIAGGYVFINGTCMDDTDADIDSS
                     SVETLDIDGEAVTVVPEPYFYIMLNKPEDYETSHKPKHYRSVFSLFPDNMRNIDMQAV
                     GRLDADTTGVLLITNDGKLNHNLTSPSRKIPKLYEVTLKHPAGETLCETLKNGVLLHD
                     ENETVYAADAVLESPSALLLTITEGKYHQVKRMVAAAGNRVQHLHRRRFAHLETENLK
                     PGEWKFIDCPKF"
     gene            complement(51909..53885)
                     /locus_tag="ACJJDE_000135"
     CDS             complement(51909..53885)
                     /locus_tag="ACJJDE_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7540144.1"
                     /translation="MSKLKTIALTASGLSVCPGFLYAQNTSSHQIGLAIMRLNSSILD
                     LPPTKQYFQSGSLWSELRQGFRMGEVNPELVRRHESKFIASHSYFNRVINRSRPYMYH
                     IANEVKKRNMPAEAALLPFIESAFVTKAKSHVGASGLWQFMPATGRHYGLEKTPVYDG
                     RHDIYAATDAALNYLQYLYGLFGDWPLAFAAYNWGEGNVGRAINRARAQGLEPTYENL
                     RMPNETRNYVPKLLAVRNIIATPQSFGMNISDIDNKPYFQAVEPDRPLDNEAIVRLAG
                     ITQSELLALNPAFNVPAFIPKSKRKLLLPVASVQTFQSNYLNAAPDSLFSWEVYTPAA
                     KTSLSDISTATGMSIADIKRLNNLNGNLVNAGRSILVAKNGKTLQTASESVVSIDIDN
                     TPDTYRSNMPAGTVNVGIARIRPAAAQTADITVAPLPQKTVRTEPDPLVRIAEPALAT
                     AAAQPQTEKQTAMPSETQTATLAQIIPQNDMQAADELMQLVARNNLRRQAEETISAVI
                     GTPDTVAEHNISSSPQHTVAADGKRRARLETRVAKAADGEAEISPLHASIHRVVEGDT
                     LFNIAKRYNVSVADLIVANNIKGNTIQKGQVLRLAQAAPAQTRIEKVSYTARKGDTFK
                     SIAARFNIHIDDIRRLNPNLNTINPGQRVKLIGS"
     gene            54063..54728
                     /locus_tag="ACJJDE_000136"
     CDS             54063..54728
                     /locus_tag="ACJJDE_000136"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7540145.1"
                     /translation="MDAWFEDTAMGRYVAKLEQDFFGRYLDSYRFSGMCAVQVGGPWL
                     SLSEDVVCVPRDMSMSAENMALADVSADMLLFPHTLEGGVPSQILSEAHRILKPCGRL
                     MLTGFNPYSLWGFSRWFDGERLPEKRFCLPLPELKRLLADAGFDIELGKFMVYLPPVS
                     SLGQIRFWQFMEKAGDRWWPQCAAVYGLVLVKRAAGVTPLPAWDGYLGGKALAAGAAR
                     IAD"
     gene            54780..55607
                     /gene="mutM"
                     /locus_tag="ACJJDE_000137"
     CDS             54780..55607
                     /gene="mutM"
                     /locus_tag="ACJJDE_000137"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HGG7540146.1"
                     /translation="MPELPEVETTLRGIAPHIEGKTVEAVVLRQLKLRWQINPDLGEI
                     LSGRQVLSCGRRAKYLLIRFQTGVLLIHLGMSGSLRIFTPSDGRIGRPDRHDHVDIVF
                     SDGTVMRYRDPRKFGAILWYEGIEEHHPLLEKLGPEPLSEAFCTDYLYVRLKAQKRAV
                     KLALMDNAVVVGVGNIYANESLFRAGISPHRPANRLKKKECALLVETVKAVLRRAIET
                     GGSTLRDFVDSDGKSGYFQQEYTVYGRHNQPCPQCGGLVVKETLGQRGTFYCPNCQK"
     gene            55695..56462
                     /locus_tag="ACJJDE_000138"
     CDS             55695..56462
                     /locus_tag="ACJJDE_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HGG7540147.1"
                     /translation="MSSNKASFFTRLRRLCRLTVWLFKTGKNLRGIDGGCPESRNRAV
                     IELGRGALTALDIGLEVGRPAPEHPNGVLVAANHVSWLDIFAMSAVYPSSFIAKQEIK
                     SWPVLGKMGQNAGTVFINRNSRRDIEPINRAVYETLQRGQNVSFFPEARTSSGLGLLP
                     FKAALFQSAIDAGAKVLAVALRYYDETGKRTARPSYADVGLPTCLWRIVSMKKLTIKV
                     DFVCVADAAESEDRYALKDKIEESIRAVVADDADIAV"
BASE COUNT        13550 a        13656 c        15372 g        13926 t
ORIGIN      
        1 ccggaaaaaa tattttaatc cgctgtaaaa tagaaaatgc cgtctgaaca tttcagacgg
       61 catttgctca aataaacctt atcggctgtt tattcagtcg gatttatttt ttcttttgcg
      121 gaggcaggtc ggtacaagta cccaatgcca cttccgccgc cataccgatg gattcgccca
      181 aggtcgggtg cgggtggatg gttttgccga tgtctgccgc gtcgcagccc atttcgatgg
      241 caaggcagac ttcgccgatc atgtcgccac cgttcggacc gacaatgccg ccgccgatga
      301 tgcggccggt ttcggcatcg aaaatcagct tggtaaagcc gttgtcgcaa ccgttggcaa
      361 tcgcacgacc ggaagccgcc cacgggaagt tggctttggt gattttgcgg ccggaggctt
      421 tggcggacaa ctcggtttcg cccacccacg ccacttcggg ggaagtgtag gcaacgcccg
      481 gaatcacgtg cgcgtcgaag taggctttgt ggccggcgca gttttcagcg gcaacgtggc
      541 cttcgtgaac ggctttgtgc gccaacatcg gttgaccgac gatgtcgccg atggcgtaga
      601 tgtgcggcac gttggtacgc atttgtttgt ccacttcgat gaagccgcga tcggttacgg
      661 caacgcctgc tttttccgcg ctgatgagtt tgccgttggg cgcgcggccg gcggcaacca
      721 atacggcatc gtagcgttgc ggctctttcg gtgcatttgc accttcaaag gtaacgtaaa
      781 cgccgtcttc tttcggctcg actgcaacgg ttttggtgtt gaccataatg ttgtcaaaac
      841 ggtattcgtt ttgtttttgc catactttca ccaagtcgcg gtctgcgcct tgcatcaggc
      901 cgtccatcat ttcaaccaca tccaaacgcg aacccagcgt gctgtaaacc gtacccatct
      961 cgaggccgat aatgccgccg ccgataatca gcagtttgcc cggtacttct ttcagagcca
     1021 atgcgccgct ggaatcgatg atgcgcggat cttcaggaat gaaaggcagt ttggttacgc
     1081 ggctgcctgc tgcaatgata cagtttttga aggcaacgat ttttttctcg ccggtagtgg
     1141 ctgcctgttc gtacgcgtcg ccggcagtca gcgacacttc caagtggtgc gggtctaaga
     1201 attgcccgtc gccttggata acgtccactt tacggctttt cgccatacct gccaaaccgc
     1261 ccgtgaggcg ggaaactacg ccgtctttgt aggcgcgaag catatcgatg tcgagttccg
     1321 gctcggggta tttgataccg ttggcagcca agtggcgcac ttcgtcgata acggcggcat
     1381 tgtgcaacaa ggctttggaa gggatacagc cgacgttcag gcaaacgccg cccaaagttt
     1441 tgtaacgttc gacgatggcg actttcaagc cttcatcggc agcggcaaat gcagcggagt
     1501 aaccgccggg accgccaccc aatacgacca cgtcgtactc ggcatcggca gaaccgccga
     1561 attgcgcggc ttgcggagca ggagcagcag ctttaggggc ttcttgcgcc ggggcggcag
     1621 caggtgcttc agctttggga gcggctgccg tgccttcagc ttcaacgacg acaatcaagc
     1681 cgccttcgga gattttgtcg ccgactttga ctttcacttc tttgaccacg cccgcaactt
     1741 cggcaggcac gtccatcgtc gctttgtcgg tttccagggt aatcagggta tcgtcaacgg
     1801 cgatggtgtc tcctacgttc acttcaactg cgataatatc tacattttcg tgtccgccaa
     1861 tgtcgggcac tttcaattca actaaagcca ttatattgac ctttcaactt agttaatttc
     1921 tatcaactct ttagcaataa tcacttcttc aggaatacag ccacaatctt cagctctgat
     1981 tgttacttcc ttctcatttg ggttttctgg atgttcaacc tcatattcaa aaatagaata
     2041 ttgaccaaac aaatccctat ttaaaacata tatatagcca ttttcgatgc cggaacttgt
     2101 tgcaaatttc ttggcaattt ccttgtctgt tgtcgtagat atataacatc cgtcatatag
     2161 acctgtttca atttgatggg cgtaaactgc attcttcaca cttggaccat gtgtagcttt
     2221 accatcatat ttaaacttac catcataacg aattgcaact tcagctttat tacctttagg
     2281 ttttaactgt ccattatttt gctcatcttg ttggcaacta atgcctctat ataagaaatt
     2341 tcccataagt tattaattta aaggttgaat ttaacaccat tactcatcaa tctcaagcaa
     2401 tccaaacatt atcagactgc ttgagaggga tgttttattt tataaggtaa tgcggcggaa
     2461 gtctttcaac agcttcgcca agaatacggt gaagcgcata ccggccgcac cgtcgatgac
     2521 gcggtggtcg aaggacaggc tcaacgggca catcaggcgc ggggcaaact ctttgccgtt
     2581 ccaaaccggt ttgatttggg atttgcacac gcccaagatg gcgacttcgg gagcgttcac
     2641 aatcggcgtg aagcctgtgc cgccgatgcc gcccaagctg gaaatggtaa agcatgcgcc
     2701 ttgcatttct tgtggtttga gcttgccttc gcgggctttt ttggacaatt ctgtcagctc
     2761 ttggctgatt tgtttcaagc ctttttgatc cacgtctttg atgacgggaa caaccaagcc
     2821 gttcggcgta tcggctgcga aaccgatgtt gaagtagttt ttcagcatca ggttgtcgcc
     2881 gtccagagaa gcgttgaatt cggggaaggc tttcagcgcg gaaacggagg ctttgatgat
     2941 gaacgccaga ggagacagtt tcacgccttc gcgttcccat tctttgttca gttgtttgcg
     3001 gaattcttcc agctcggtca tatctgcttc ttcgtgtacg gtaacgtggg gaatcaccac
     3061 ccagttgcga gacaggtttt gaccggagat tttcttaatg cgggacaatt ctttaacttc
     3121 gacattgccg aatttggaga agtccacttt aggccacggc agcaagtcca gaccgctgcc
     3181 caaagatgcg ccggctgcgg caggttttgc cgcgccaccc tgcattacgg atttcacaaa
     3241 ggctttgatg tcgtcgccca cgatacggcc tttcaagccg gtacctttga cttggcccaa
     3301 atccacgccc aattcgcgcg ccagtttgcg tgcggaaggg ccggcgtgtg ctttggcgaa
     3361 agcggcctcg tcgattttgg cagcggcagg tgcagaaggt gcaggcgcgg cggcgggtgc
     3421 ggcggcagca gtcggagccg gtgcggcagc ttgagcggct tgagcaggag ctgctgcgac
     3481 agagccggcg gtttccactt cgataatggc agagccttcg gacactttgt cgccgacttt
     3541 taagaatacg gctttaacga cgccggcagc ggtacaaggt acgtccattg tcgctttgtc
     3601 ggtttccaaa gtaatcagcg tgtcgtcttc ggcaacggtg tcgcccactt tgatttcaac
     3661 ggcgattaca tccacatcgg tatgaccgcc gatatcggga acggctactt gaacggttgc
     3721 accgcctgcg gcaacgggtg cggcggcagg tgcaggttgt gcttcagcgg caacagccgg
     3781 agcggcttcg gcggcggagg caccggtttc aacggtcaaa attacgccgc cttcggagat
     3841 tttgtcgccg actttgactt ttacttcttt cacgacaccg gcagcatcgg caggcacatc
     3901 catcgtggct ttgtcggttt ccagtgtaat cagggtgtcg tcaacggcga tggtgtcgcc
     3961 cgctttaact tctacggcga tgatgtcgac gttttcgtga ccgccgatat cggggacttt
     4021 gatttctacg atactcattt gagttccttt aatcttgttc agttggatgc cgtctgaaag
     4081 ctgcttcagg cggcatcggt acggtttgtc tgctcaaacc attcgggcat tcggttttca
     4141 gacggcctga tgtcggaatg gggcaaacag gccgtctgaa acatcaatca gcgtttccag
     4201 ctaggagctg aatcggcttt gatgccgtat ttctcaatgg cttgttgaac ggtttctttg
     4261 ctgactttgc cttgttccgc caatgcggcc aatgcggcca cggcaacgtt gtagcgatcc
     4321 acttcaaaga agcggcgcag gttggcgcgg ctgtcggagc ggccgaagcc gtcagtaccc
     4381 aagacgtggt agtcgttcgg gatgtaggcg cggatacggt cagcatagct gcggatatag
     4441 tcggtagcgg caataaccgg accgtcatga ccttgcaatt tggaagtaac gaaaggtact
     4501 ttttcggctt ccagcggatg caggcggttg aagcgttcta cctcgacagc gtcgcggtgc
     4561 agcaggttga aggatgggca agaccaaatg tctgcttcca cgccgaagtc ggctttcagc
     4621 agttcggcac cggcaatcac ttcttgcaaa atcgtaccgg aacccatcag ttggactttc
     4681 ttgtcgcctt tgccgccggc tttcagcagg tacatacctt tcaagatgtc ttgttccgca
     4741 ccttcgggca tatccggatg ggtgtagttc tcgttcatca gggtgatgta gtagaacacg
     4801 tcttcattat tggcatacat acggcgcaga ccgtcttgta cgatgacggc gacttcgtat
     4861 tggaaagtcg ggtcataaga tacgcagttc ggaatcaggt cggcctggat gtggctgtgg
     4921 ccgtcttcgt gttgcaggcc ttcgccgttc agcgtcgtac ggccggcagt accgcccagc
     4981 aggaagccgc gcgcgtgcat atcgcccgcc gcccaagcca agtcgccgat acgttggaaa
     5041 ccgaacatag aatagtaaat gtagaacgga atcatggcga agttgctgtt ggcgtagctg
     5101 gttgcagccg caatccagtc ggccatcgcg cccggttcgt taataccttc ttgcaagatt
     5161 tgaccgtcaa cggattcttt atagaacatc agttggtctt tgtcttgagg ggtatattgc
     5221 tgacctttcg gattccaaat accgtattgg cggaacatac cttccatgcc gaaagtacgg
     5281 ctttcgtcgg gaacgatagg tacgacgcgt ttgccgattt ttttgtcttt cagcaaagtg
     5341 gacaggatgc ggacgaatgc catcgtggtc gagaactcgc gttcaccgct ggatttgagt
     5401 tgtgcgtcga atgctgacag ctcgggcact tccaatactt cctgcgtcgg tttgcgttgc
     5461 ggcaggtagc cgcccaaagc atcgcggcgt gcgtgcaggt atttgtattc ttccgtatcg
     5521 ggggcaaaag tcaggtaagg cagatcgccg ctttcgattt gttcgtcggt aaccggaatg
     5581 tcaaagcggt cgcggaattg tttcagggac gctttgtcca tttttttggc ttggtgggca
     5641 acgttctgac cttcgccgga tgcgcccata ccgtaacctt taatggtttt cgccaagatg
     5701 acggtaggtt tgccgtcggc atggttcgct gcgcggtcgt aggcgttgta cactttttgc
     5761 gggtcgtggc cgccgcggtt caatgcccag agttgctcat cggtcatatc ggcaaccaat
     5821 gctttcagtt cgggcgtatt gaagaagtgt tcgcgcacat acgcgccgtc tttggatttg
     5881 taagtttggt agtcgccgtc caaacattct tccatacgtt ggcgcaggat accgtctttg
     5941 tctttcgcca agaggcggtc ccagcggcgg ccccaaatga ctttgacgac attccagccg
     6001 gcgccggcaa agttgccttc caattcttgg atgattttgc cgttgccgcg taccggaccg
     6061 tccaagcgtt gcagattgca gttgatgacg aaaatcaggt tgtccaagcc ttcgcgtgca
     6121 gccagtgcga ttgcaccttg agattcgggt tcgtccattt cgccgtcgcc gcagaaacac
     6181 catactttac ggcctttggt ttttgccaaa ccacgcgatt ccaagtattt caggaaacgc
     6241 gcctgataaa tcgccatgat gggccccaag cccatggata cggtcgggaa ctgccaaaag
     6301 tcgggcaaga ggtgggggtg cggataggaa ggcagaccgt gtccgtccac ttcttggcgg
     6361 aagttgttca gctggtcttc ggtcagacgg ccctcgacga atgcgcgtgc atagatgccc
     6421 ggggcgacgt gaccttggaa gaagaccaaa tcgccttctt cgccttcgcc tttggctttc
     6481 caaaagtggt tgaaaccgac ttcgtacatg gtggcggcag attggaaaga tgcgatgtgc
     6541 ccacccagtt ccaaatcttt cttgccggcg cgcaatacga tggcggcggc gttccagcgc
     6601 acgaatgcgc ggatgcggtg ttcgatgttt tggtcgcccg gaatgccttt ttcgttttca
     6661 accgaaacgg tattcaaata cggggtggtc gtgccgtgtg gcatacgtac gcccttgtcg
     6721 cggcagtatt tgaccaggtt ttccaagagg tattgcgcgc gttcgccgcc ttcatattcg
     6781 aggacggagc ttaacgcgtc cagccactct tgggtttcga tagggtcaac atcgtgtaat
     6841 tgggtggaca tagtatctat cctttatgtt gagtgtttaa tcggcaggga gggtgtagcc
     6901 aaccccttta ttttcgtttg tgaaaaataa taagcaaaaa cgaaaatttc taaatcaaac
     6961 cgaaaaaaat aatttaagtt taatgttttc aaaaaattat aaaagttttg gaaacaaggg
     7021 aaaacttgaa aaaaatgttc gatctgctcc acacgaaatc ctatcagcaa tcgggtctgc
     7081 tggcaaataa ccatgcctgt aaaagcaggt tttatactga agttggcgtt tggtaaggtc
     7141 aagtcttttt gatttcgaaa tattctgttt gattttggcg atattttttc ggaattgtgg
     7201 tatatcgaat cattatgtct ctgtcggcaa ttttcctatt gtagaaaatc tatacacaag
     7261 ctttgtggat aaccgtgttg ataagccacg gcttgtgtta aaaaagtctt acgcaacaaa
     7321 tgtacgctta ttttgattaa aaaataggca catttaaatc tataaaaatc atgtgcttat
     7381 gttcaatatg atgtttctgg tcatgttttt gccgtctgtt atgggatttg tcccgagctt
     7441 ggggcagggg gtgaattttg gaggttggtg caaaacctgc ttttttcgcg ttacaatctg
     7501 cacccgattt acttttgaat ttgcctgttt ggaaaaatac ttttatgaaa gccagccaat
     7561 tctttatctc tactttaaaa gaagcccctg ccgaagccgc gcttgccagc cacaagctga
     7621 tgattcgcgc cggtctgatt aaagccaacg cgtccggcct ttatacttgg atgccgatgg
     7681 ggctgcgcgt gttacgcaaa gtcgaaaacg tcgtgcgcga ggaaatggcg cgtgcgggca
     7741 gcgtggagtt gctgatgccg gtggtgcagc ctgccgagct gtggcaggaa tccggccgct
     7801 gggagtttta cggtaaagag ttgctgcgcc tgaaagaccg ccacgaccgc gatttctgca
     7861 tgggtccgac ctgtgaagaa gtcatcgccg acatcgtgcg caaagaaatc aacagctaca
     7921 aacagctgcc gaaaaacttt taccacatcc aaaccaaatt ccgcgacgaa gtgcgcccgc
     7981 gtttcggcgt gatgcgcgcg cgcgagttcg tcatgaaaga cgcttattcc ttccatgccg
     8041 actacgcctc gcttcagacg acctatgatg ccatgtatga cgcttactgc cgcatcttca
     8101 cccgtctggg cttggcattc cgccccgtcg ccgcagacac cggcagcatc ggcggtacgg
     8161 gttcgcacga gtttcaagtg ttggcggaaa gcggcgaaga tgtgattgcg tacagcgaca
     8221 cttccgatta cgccgccaat atcgagttgg caccgacctt gccgcttaaa ggcgaacgca
     8281 ccgctgctca ggccgagttg accaaagtac atacaccaaa cgtcaaaacc attgagtctt
     8341 tggttgaatt cctgaatatt ccggttgaac aaaccctcaa atccatcgtg gttgaaggcg
     8401 aaaacgaagg cgaaatcgtc ttattactgt tgcgcggcga ccatgagttc aacgacatca
     8461 aggcagaaaa actcgcaggc gtgagatcgc cattgacgat ggcaagtcct gccgcgattg
     8521 tcgaacagtt cggcgcaaac ggcggctcgc tgggtccggt cagctttgca ggtaaagttt
     8581 atgccgattt tgctactgaa aaaggagcgg actgggtcat cggtgcgaac gaagacggct
     8641 accactacac cagcttcaac ttcgggcgcg atgccgccga gcctgaattc gtcgatttgc
     8701 gtaatgtggt cgaaggcgac gaaagccccg acgggcaagg ccgtctgaaa ctcgcgcgcg
     8761 gcattgaagt cggacacgtc ttccagttgc gcgacaaata cacccaagcc atgaacgtaa
     8821 gcttccttga caacaacggc aaatcgcaaa ttatggaaat gggctgctac ggcatcggca
     8881 tcacccgcgt cgttgccgcc gccatcgagc agaataacga cgaaaaaggc atcatctgga
     8941 ccaaagcaat ggcgccgttt gaagtcgtta tcgtgccgat gaactacaaa aaatcagaca
     9001 ccgtacgcga agccgccgac aaaatctatg ccgaattgct ggcggcaggc gcggatgtgc
     9061 tgctggatga ccgcgacgaa cgcgcaggcg tattgctgaa cgattccgag ctgttgggta
     9121 ttccgcaccg catcgtcatc ggcgaccgcg ctttgaaaga aggcaatgtc gaatacgccg
     9181 aacgccgcaa caacgaagcg caggcagttg caatcggaga aattgttgcg cgtgtaacag
     9241 ctttattaaa tgggtaagct tggtcaaatg ccgtctgaaa ataatttcag acggcatttt
     9301 tatttgggga gaaagtgaag tggcttcagt atttttagaa ggagaagcag tcgaggtcgg
     9361 caatattttc tgtatcggca ggaactatgc cgcacatatt gaagagttaa aaaacgaaat
     9421 accttccgaa cctgtggtgt ttatgaagcc gtcaggcagc attttgaaca gcggcggtac
     9481 aatcttgctg cccgagttta gtagggatgt gcagtttgag tgcgaactcg tgctgctggt
     9541 cggtaaggat tcagacggca cgggcgaggg taaagatatt ttgggatgtg tcgcaggata
     9601 tggtgtaggg ctggacctta cggcacggga tatccaatgc cgtctgaagg aaaaagggct
     9661 gccctggctg aaggcaaaag ggttcaggca ttccgcgtgc gtgtcggatt ttgcggcggc
     9721 aggcagaatc ggcaatcccg agaatgtgtt gttttcatta aaacaaaacg gcgtattgaa
     9781 acagcgcggg gataccggtt tgatgattta cccgattcgg gaaattttac acaaactggc
     9841 ggcagattac ggtttgggga aaggggattt ggtgtttacc ggaacgccct ccggcgtggg
     9901 cgcaatcggt gcgggggaca atttggcatt ggagctggac ggcttggtgc gcgcctcttt
     9961 cacggtaggg tgttaaccgc gccgcttaac cctcacgccc gttgaaacat tccgccggac
    10021 cgccctcgaa aaaaccgtgc aagatggctt gcgccgccac ttggtcgagc accgatttgc
    10081 gttttttgcc gaagacctgt gcttccgaaa gcaggctttc ggcatagacg gacgacagcc
    10141 gttcgtcaac ccaatagacg gggagattga acctgccgtt cagcctgcgt ccgaacttgc
    10201 gcgacaggtg cgtcatttca tgtttcgtgc cgtcggtatg cacgggcagt ccgacgacaa
    10261 aataacgcgg ctgccattct tgaaccagct tggcgattgc cgcgaacttt tcatcgttgc
    10321 tgccgccggt aacggtgctc aaaggatggg atagccctaa ttccgcgtct ccttgtgcca
    10381 cgccgatacg cgcttcgccg aagtcgaatg ccagtgccgt tccttttgga attttatgca
    10441 tggccggctc ccgaaaacag ggcgagcggg tcgatgccga gtttggcgaa tgcggcggcg
    10501 taacggtgtt cgtaggggat gtcgaacagg atgtgttcgt cggcgggaac agtcagccac
    10561 gcattgtcgg caagttcgcg ttcgagctgg ccttttcccc agcttgaata gcctatgctg
    10621 atcaaggctt tgtcaaccgc accttcgcgt gaaatatttt caatcacgtc tcgggaagaa
    10681 gttagcgcga tattgtctga aacgccgata ctgctttgcc agttgccgat cggggtatgc
    10741 acgacataac ctcgctcgac ttgcaccggc ccgcccatca tcacgctgtc gtgctgcatc
    10801 cgcatgggga tgtttttgcc ggtggcggaa aaaatcatgt ccatcgtaat cggagagggt
    10861 ttgttgatgg cgatgccgag tgcgccgtct tcatcgtgtt tgcagatata gacgaccgat
    10921 tgtgaaaaaa acgcgtcttc catatcgggc atggcgacga gaaagtggtt ggagaggttc
    10981 atatcagcgt ttgtcgggat tttctatcgg gttggaaatc atgcaggcgc cggcaagcag
    11041 gttgccggaa gtatcggctt gcaccccatc ggtttgcggt atgccgccgc cgaaacagga
    11101 aaccgcgctt aaggaatttt tcggcgagcc ttggatgatt ttatcgctgt acaccaaata
    11161 ggcgaaggtt ttgcgtttgg ggtcgtaata acggacaatc tgccggctct tgaacgcgaa
    11221 gctcgcaccg tgtttgaaaa cttctttcgg tttgcgcacg gcggtttcgt caaaagaaat
    11281 cgaagatgcc gtctgaacgc acgaaaccga tgcgtcggac gcgtcctctt ccaaattgac
    11341 catttccttc aagccgcctt tttttgcata cgaaatataa caggcaaccc cttgaacgtc
    11401 gggatcgtcg aatccttcca cttcgatacg gtcgtttttg cccagtatgt tgaaaacggt
    11461 acttgcccgt ccgattttat cggtttcgcc gctgccgcag gcagtcagca ggacggcggc
    11521 agacagcagt agcagtctgt tcatcaaaat ttccttatcg gttgaatccc cgttttccgt
    11581 gaaggcggca gggcttgctt tgtttggagg ggcgcacgtt cccaaaatcg ggcaacatac
    11641 ggtatgcggc ttaatgtgct accctgtgtg tcggaacaca atatccgttg cggcattgaa
    11701 aatatgatgc acaatataag gctgtttgag ccgattgcaa gtatccgcgc aaagaaggcg
    11761 caagattggg caaacggcat tttcagacgg cataactgac agtataatcc aaacgtccgg
    11821 ctgctttcgt gcagccttca gtattatcca actttttccg aaggtcgaac catgcgctac
    11881 aaaccccttc tgcttgccct gatgctcgtt ttttccacgc ccgccgttgc cgcccacgac
    11941 gcggcacaca accgttccgc cgaagtgaaa aaacagacga agaacaaaaa agaacagccc
    12001 gaagcggcgg aaggcaaaaa agaaaaaggc aaaaatggcg cagtgaaaga taaaaaaaca
    12061 ggcggcaaag aggcggcaaa agagggcaaa gagtccaaaa aaaccgccaa aaaccgcaaa
    12121 gaagcagaga aggaggcgac atccaggcag tctgtgcgca aaggacacga aggggataag
    12181 aaatcgaagg cggaacacaa aaaggcacat ggcaagcccg tgtccggatc caaagaaaaa
    12241 aacgcaaaaa cacagcctga aaacaagcaa ggcaaaaaag aggcaaaagg acagggcaat
    12301 ccgcgcaagg gcggcaaggc ggaaaaagac actgtttctg caaataaaaa agtccgttcc
    12361 gacaagaacg gcaaagcagt gaaacaggac aaaaaataca gggaagagaa aaatgccaaa
    12421 accgattccg acgaattgaa agccgccgtt gccgctgcca ccaatgatgt cgaaaacaaa
    12481 aaagccctgc tcaaacaaag cgaaggaatg ctgcttcatg tcagcaattc cctcaaacag
    12541 cttcaggaag agcgtatccg ccaagaacgt atccgccaag agcgtatccg tcaggcgcgc
    12601 ggcaaccttg cttccgtcaa ccgcaaacag cgcgaggctt gggacaagtt ccaaaaactc
    12661 aataccgagc tgaaccgttt gaaaacggaa gtcgccgcta cgaaagcgca gatttcccgt
    12721 ttcgtatcgg ggaactataa aaacagccag ccgaatgcgg ttgccctgtt cctgaaaaac
    12781 gccgaaccgg gtcagaaaaa ccgctttttg cgttatacgc gttatgtaaa cgcctccaat
    12841 cgggaagttg tcaaggattt ggaaaaacag cagaaggctt tggcggtaca agagcagaaa
    12901 atcaacaatg agcttgcccg tttgaagaaa attcaggcaa acgtgcaatc cctgctgaaa
    12961 aaacagggtg taaccgatgc ggcggaacag acggaaagcc gcagacagaa tgccaaaatc
    13021 gccaaagatg cccgaaaact gctggaacag aaagggaacg agcagcagct gaacaagctc
    13081 ttgagcaatt tggagaagaa aaaggccgaa caccgcattc aggatgcgga agcaaaaaga
    13141 aaattggctg aagccagact ggcggcagcc gaaaaagcca gaaaagaagc ggcgcagcag
    13201 aaggctgaag cacgacgtgc ggaaatgtcc aacctgaccg ccgaagacag gaacatccaa
    13261 gcgccttcgg ttatgggtat cggcagtgcc gacggtttca gccgcatgca gggacgtttg
    13321 aaaaaaccgg ttgacggtgt gccgaccgga cttttcgggc agaaccggag cggcggcgat
    13381 gtttggaaag gcgtgttcta ttccactgca ccggcaacgg ttgaaagcat tgcgccggga
    13441 acggtaagct atgcggacga gttggacggc tacggcaaag tggtcgtggt cgatcacggc
    13501 gagaactaca tcagcatcta tgccggtttg agcgaaattt ccgtcggcaa gggttatatg
    13561 gtcgcggcag gaagcaaaat cggctcgagc gggtcgctgc cggacgggga agaggggctt
    13621 tacctgcaaa tacgttatca aggtcaggta ttgaaccctt cgagctggat acgttgatcg
    13681 gattgccgaa acggtaggct ttatgcaaat cgtgccgata tggtgcgctg ttccgtgaag
    13741 tttgccgtac ctgtattttc cggtttttgg aaatcaagag agaaagttaa agaagaatgt
    13801 cgaaacctgt ttttaagaaa atcgcacttt atactttggg tgcaatcagc ggcgtggccg
    13861 tcagtctggc ggtgcagggt tttgccgccg agaaggacag gcgggataac gaagtcctgc
    13921 cggtgcaatc catccgcaca atggcggagg tttacggtca aatcaaggca aactactatc
    13981 aggacaaacc cgatgccgat ttgtttgaag gtgcgatgaa gggtatggtg gccggtttgg
    14041 atccgcattc cgaatatatg gataaaaaag gttatgccga gataaaggag tccaccagcg
    14101 gcgaatttgg cggcttgggg atggaaatcg ggcaggaaga cggatttgtc aaagtggttt
    14161 cgccgattga ggacacgcct gcggaacggg cgggggtgaa aagcggcgat ttcattgtga
    14221 aaatcgataa tgtttcgaca cgcggcatga cggtcagcga agcggtgaag aaaatgcggg
    14281 gcaagccggg tacgaagatt actttgacgc tgtcgcgcaa aaatgccgac aagccgatag
    14341 tcgtcaacct gacccgtgcc attattaaag tgaaaagcgt ccgccatcac ctgatcgaac
    14401 ccgattacgg ctatatccgc gtgtcgcagt tccaagagcg gacggtcgaa agcgtcaata
    14461 ccgccgcaaa agagctgcta aaggaaaata aaggaaaacc gctcaagggg ctggtgttgg
    14521 atttgcgcga cgaccccggc gggcttttga ctggcgcggt cggcgtgtcg gcggcatttc
    14581 tgccgtctga agcagtcgtc gtcagcacca agggacgcga cggcaaagac cgcatggtac
    14641 tgaaagccat tcctgaagat tatgtgtacg ggatgggcgg cgattcgttg gcgggcattc
    14701 ctgccgagtt gaaaaccata ccgatgacgg tattggtcaa ttccggttcg gcttccgcgt
    14761 cggagattgt cgcaggtgca ttgcaggatc ataaacgcgc ggtcatcgtc ggtacgcaga
    14821 gcttcggcaa aggttcggtt cagactttga ttcctttgtc caacggcagc gcggtcaagc
    14881 tgacaacggc actgtattat acgccgaacg accgttctat tcaggcgcag gggattgttc
    14941 ccgatgtcga agtaaaagat aaggaacgca tttttgaaag ccgcgaggcg gatttggtcg
    15001 gacacatcgg caatcctttg ggcggcgagg atgtgaacag tgaaaccctt gccgtgccgc
    15061 ttgaaaaaga tgcggataag cccgctgtaa aagaaaaagg taaaaagaaa aaggacgagg
    15121 atttgtcttc aaggcggatt cccaaccctg ccaaagacga ccagttgcgg aaagctttgg
    15181 atttagtcaa gtcgcccgag cagtggcaga agtctttggg gctggcggcg aaaaagccgg
    15241 tttcaaataa agataagaaa gataaaaaag ataagaagta ggttttgacg atgccgtctg
    15301 aaaggatttc agacggcata ttatgtttga aaggacaggt tatgagcgat tttttaccgg
    15361 aatttgaacc gtgcggcatt tatagtggat taacaaaaat caggacaagg cgacgaagcc
    15421 gcagacagta caaatagtac ggcaaggcga ggcaacgccg tactggtttt tgttaatcca
    15481 ctatacttgg gtagcgattg ggtttcagac ggcatacatt caggatttca ccgccttatg
    15541 ccgtctgaaa gacgtttccg acccatccct actacacgct ttgtccgcaa acgcatcaca
    15601 ggcaagatta tggaagtcat tcgatacccc gattccccct tcaaactcca ccaacccttc
    15661 ccgcccgcag gcgaccagcc taccgctatt gccgacttgc tcgaagggct ttcagacggc
    15721 cttgcctacc aaaccctgct cggcgtaacc ggttcgggca aaacctacac catggcgaac
    15781 gtcatcgccc aaagcggccg acccgccatc atcatggcgc acaacaaaac ccttgccgcc
    15841 cagctttatg ccgaaatgcg cgagtttttc cctgaaaacg cggtggaata tttcgtctcc
    15901 tactacgact attaccaacc cgaagcctat gtgccaagcc gcgatttgtt catcgaaaaa
    15961 gacagtgcga tcaacgaaca cattgaacaa atgcgccttt ctgccaccaa aaacctgatg
    16021 acgcgcgatg acgtgattat cgttgccact gtgtccgcca tttacggtat cggcgacccg
    16081 actgagtatc aacaaatggt gttgtccgtc aaagaaggcg acaccatcga gcagcgcgac
    16141 atcatcgcca cgctcgtttc catgcagtac gaacgcggcg atttggattt caaacgcggc
    16201 agcttccgcg tgcgcggcga cgtgattgac gtgtaccccg ccgaaagctc cgaaaacgcc
    16261 ttgcgtatca gcctgtttga cgacgaaatc gaccgcctcg atatgtttga cccgctttca
    16321 ggcagcctgc accaacgcgt cggccgctac accgtcttcc cgtccagcca ctacgttacc
    16381 ccgcgcgaca ccgtattgcg cgcctgcgag tccatcaaag aagaattgcg cgaacgcatt
    16441 gatttcttta ccaaagaaaa ccgtcccgtc gagcaacaac gcatcgaaca gcgcacccgt
    16501 ttcgacctcg aaatgctcta cgaaatgggc ttctgcaaag gtatcgaaaa ctactcccgt
    16561 cacttctccg gcaaaaaaga aggcgaaccg ccgcccacgc tgatggacta cctgcccgac
    16621 aacgccatca tgttcatcga cgaaagccac gttaccgtca cacaaatcgg cggcatgtac
    16681 aaaggcgacg catcgcgcaa gcaaaacctc gtcgattacg gcttccgcct accttccgcc
    16741 cgcgacaacc gcccgctcaa attccacgaa tttgaaaaag tcatgccgca aaccgtcttc
    16801 gtttccgcca cccccgccaa atacgaagaa gaacacgccg gacaagtggt cgaacaagtc
    16861 gtccgcccca cagggctggt cgaccctcaa atcatcatcc gccccgtcgc cacccaagtt
    16921 gatgacttaa tgagcgaaat caacgaccgc atccaaaaag gcgaacgcgt actcgttacc
    16981 acccttacca aacgcatggc ggagcaactc accgactatt acagcgaact cggcatcaaa
    17041 gtgcgctacc tgcacagcga catcgacacc gtagagcgcg ttgaaattat tagagattta
    17101 cggctcggat tgtttgacgt actcgtcggc atcaatctct tgcgcgaagg cctcgacatc
    17161 ccagaagtct ccctcgtcgc catcctcgac gcagacaaag aaggcttcct gcgctcccac
    17221 cgcagcctga ttcaaaccat aggccgcgct gcgcgcaacg tgaacggcgt cgcgattctg
    17281 tacgccgaca aaatcaccga ctctatgaaa gccgccatcg acgaaaccga acgccgccgt
    17341 gaaaaacaaa ttaaattcaa cgaagaacac ggcatcgtgc cgcaacagat taaaaaacag
    17401 gtcaaagaca tcattgacgg cgtgtaccac gaagaagaca gcggcaaagg ccgtagacaa
    17461 ggcaaaaaca aagttaaagt cggcgaaatt cacaacgaag aagacacgat taaagaaatc
    17521 gccaaactcg aaaaagccat gcaacaggcg gctagggatt tgcagtttga agaagcggct
    17581 gttcttcgtg ataggatacg gaatattaaa gagagtttgt tgtttggggc ggaataattt
    17641 tattattttt atttaacatg gagattaatt aaatgacttc tattatttta gaactccaaa
    17701 gcctagctgc caatccaaat agtgatgtag aagagttagt gagtaaaaca ttaatggttg
    17761 caagaaaatt aaaaattaat gaattaactg aatggtgtaa taatgaatta caaggttatt
    17821 catcaaaaaa tttaccaaaa tatagaatat tttatggaga gttaaaagct tttaaccctt
    17881 atcgtggcga tgttccattt atgcttcccg atgaattgag agaacgagta acaagagttg
    17941 aatatacctc atcaattagc gaaataagaa acttactaaa aacaaaaaat aataatttta
    18001 tacgaattct atctagtaaa gaaaaacagt ttttaatgaa tttacaagat actccatttc
    18061 cacttgaacc taaaataatt atttatccaa ttaacttaat gaatattcaa tcaaaagtaa
    18121 gacaactaat tttagcttgg gcattacgac tggaagagga aggtatttta ggagacggta
    18181 tccaatttac aaaatcaaaa caggagaaag caatgtcaaa ccaattcaat attcagaata
    18241 tgcaagggtt tattggggat atttttggcg gtaatgttca gcaaaatatt caagacggta
    18301 ttcatattga aaaagaaaat ttcaataaac tggctaactt tttagcaaaa aacgggattc
    18361 catctgccga attagaagat ttacgaaatg cactgataga agatggtcag cccacagata
    18421 aaaaattcgg ctcaaaagta agtgcatgga ttggcaatat tattacaaag gcttctaccg
    18481 gtgcaattga tgtttcagta ggtactattg caggaatatt aactaatgcg atttcaaaat
    18541 attatggctt aatgtaagca aatgcaatat gtgcggctcc accacacacg ccgtccccaa
    18601 ccgcccaaaa ccgcgtgcct gcctgcggct taccccctac cacccaacca acacagcaag
    18661 cgtaggttgg atacttgtat ccgacaaaac ctttaacatt cccatcattg caatccattg
    18721 tagcaatgcc caaaatgtcg gattcgagaa tccgacctac aaaatcattc cgagcataat
    18781 actatgaaat accgtcgttt ttaccgcaat ggcggcactt acttttttac ggttgtagcc
    18841 aataaacggc agaagatttt gaccgatgat gcggtgcgtt tggctttacg gcaggcggta
    18901 atggcggtgc gcgaacggta tccgtttgaa attttggcat gggtgttgat gcccgaccat
    18961 ctgcatacca tatggcggct gccggacaat gattctgctt attcggaacg ctggcggcag
    19021 atcaagcggc acagccaata tttaatcggc ggcaaactca ggctttggca aaaacgcttt
    19081 tgggaacata ctatccgcga tgaggccgat tttgcctgcc attttgatta tctgcatttc
    19141 aatccggtca aacatggcta tgtaggacaa atttccgatt ggcggttttc tacgtttcac
    19201 cgttatgtca aacagggtat ttatccgcat aattggggtg gcggcaatgc ggacttttct
    19261 attggatacg attgaagtaa tgtcggattc gagaatccga cctacggaaa actaaagatt
    19321 ttatacgggc tacggcttgc tggcttatgc gttggcttaa tttgaaaaac agcacatcgg
    19381 ttcataatac acaaggtatt agaacaaaag aagcagttga acagggattg cgtggtaata
    19441 atagacctga aaaaggaata ggtaatagat ggaattatga tggatttata aaggaattag
    19501 cgaagtaaca ggtattctaa atatttctga taaatataaa gaacaaggag taaaaaaatg
    19561 aaagtaatca ctattacatt gtttactagc tgcatactat ctggatgcta tgggcttgaa
    19621 tatggaatga gtggcggcat tcctcatgat gactgggcaa gaggtagcca tgttagtcaa
    19681 gccaaagcag atgctgcgtg gaaagaatgt tctgacaaat atatgagaaa tggtggttca
    19741 ggattagtag aacaatgtat gaatgataaa ggattaatac gtttatctga aatacgtcgt
    19801 aggcaaaaga gagcagaaac acaaagagca gtaattaagt aacaataatg aaatactact
    19861 gttcccgaac aaagcggcat ttacgcaggt gatgacggct atattttgaa aaatgccgtc
    19921 tgtaagcaaa cgtgcttcag acggcatttt tttatccggc ggtctgttat ccgatccgtt
    19981 tgaataccaa gtcccaaacg ccgtgtccga ggcgtttgcc gcgcgcttcg aatttggttt
    20041 cggggcggta gtccggggtg ggggcgtagt ctgccgccgt attttgcagg ctgtcgaagc
    20101 tgctgaggac ttcaagcatc tgctgcgcat attcttccca gtctgtcgcc aagtggatat
    20161 agccgccggt tttgagtttg ggcagcagtt tggcgatgaa gggggcttgt atcagacggc
    20221 gtttgtggtg gcgttttttg tgccacgggt cggggaagaa tatgtggatg ccgtcgagcg
    20281 agccgtcttg cagcatattt tcgacaactt ctacggcatc gtgccgcatc acgcggatgt
    20341 tttccaaatg gttttcttct atgagtttga gcagattgcc tacgccggga ccgtgtacgt
    20401 cgatggcaag aaagtcggtt tcgggcagcc tgcgggcgat ttctgcggtt gccgtcccca
    20461 taccgaagcc tatttcgagg attttgggtc ggctgcttcc gaaacgggca tcaagatcgg
    20521 ccggtgttgc ttggtagtcg atgccgaagc tgccccataa ggtatcgatg gcgcgttgct
    20581 gcgcggaggt catgtggctt tggcggagga cgaaactgcg gatgctgcgg gggtgttcgg
    20641 cttgccagtt gttttgtgtt tggttttcgg cggtgtctgt cataatgctt tcgtgcgctt
    20701 gtgcaatcag gatgccgtct gaatgtgaaa tgcctgttcg gacggcggga aaggaaaggg
    20761 gcgattatac ctgtttcgtt tcggcagggt aggtgtaacg ctgttcagac ggcattttgc
    20821 cactgttgca acagttcttg cagaaagctt ttttgttcgt gtccgctgtt tatggcttct
    20881 tgcaggtagc ggcaggcttt ttcgttgtcc ggcccgacac cgtgtccgct gtaatggatg
    20941 caggcgaggt tgtagaacgc catactgtct ttttttgcgg cggctttttc aaaccatttg
    21001 cgtgcttcat tgtagtcggc ggtcataccc tgtccgaagt aatacatgct gcccagattg
    21061 gtttgggctt tgctgtggcc gagttctgcg gcttctgtgt agagtttgag tgcggctgca
    21121 tattcgggcg cgcattgtaa tccgtaatgc agggcttggg ctttttgata aagccgttct
    21181 gccctttgcc gcctgatggc ggaatcttta atgccgccgt attggttagg atggtttaac
    21241 gcgctgtcgg atatgagttt ctgataggcg gaaaggctgc cggcttcggc tgcctgccga
    21301 taataatgcc gggctttttc cgtatcgggg gctatgccca aactgtagcg gcagatgtcg
    21361 cccagtatcc gcaaaccttc gggatggcgt tcggcggcgg ctgcttcggc atgatgcagg
    21421 gcaagtttgt ggtttctttc cagatgcttg ccttgtaggt agatgtcggc aagtgcggca
    21481 tgggcatcgg ggtcattttc ctgtgccgcc tgttggaacc ggtaaacggc ttcatcggga
    21541 gccgtaggta ggatgagttc ggcaagcggg gtgtaggcgg gaatgtatcc ttgttgtgcg
    21601 gcggcgcgca aatgattgat agcttgggtc gtgtcggttg gtgtaccttg tccgaaacgg
    21661 tattgaaggc cgagctgcca ttgtgccgcc gccaagcctt gtgctgcagc ctcgcggtag
    21721 agaaggtgtg ccgtttcaaa atccggtggc gtaccgtact ggcagtattg ggcaagcaga
    21781 tattgtccgt gggggttgtt gttttttgcg gtcgtttttg cccatttcag ggcttcttca
    21841 aaatgtcggg acgcatacag aaggtacatc aggcggactt gtgcttcggg cagtccttcc
    21901 tctgccaacg gtctgtaaag cggtatcagg gtttccgggc gcgcgccttc caattcttgg
    21961 atatatgcca gattgtaacg cgcgtaggga tgcccctgtt cggcggcgat gcggagcatt
    22021 tccatacctt gttcgcggtc ttggtgcggg ctgtccgcgt ccatcaggtg ttttgctaac
    22081 tcgaatgcgg cggcgggatg acctgccgag gccgcttctg tcagcaggcg gcggacttcg
    22141 gtaaagtcat attgttcttg agacaggcgt tctaaggctt gatgatagag taagtcggga
    22201 ttgttcatat cagatcgttt tccgttttgt caaatcatcg ttattcgtta tgaagttagg
    22261 tttatatcgg cacgcctgcc tactgtatca tattttttac agacggattt tgtctttgaa
    22321 agcatgctaa tgcagatgct cgtaaatggt ttccgccaat gccttgctga tgccttcgac
    22381 ttgttccaaa tcttctttgc tggcggcaac gacaccgcgc aggccgccga agcgggtgag
    22441 cagggcctgg cggcgtttgc tgcctacgcc ggggatgtcg cttaaggagg aggtaacgcg
    22501 tgctttgtcg cgttttttgc ggtggcctgt aatggcaaag cggtgtgatt cgtcgcgcac
    22561 ggtttgcaat agatgcaagg ccgggctgtt gggcggcagg cggaagactt cgccggtaaa
    22621 aggcagtatg agttcttcca taccggcttt gcgctcaggg cctttggcga tgccgaccaa
    22681 gggaatgtgc agaccgagtt cttcccatac ggatacggcg acgccgattt gtcctttgcc
    22741 gccgtcaatc aatacgacat ccggccattt gacggtctcg ccgttggctt cggcttcctg
    22801 cattttgccg taacggcgca tcaatacttc gcgcatggcg gcgtagtcgt cgccgggctt
    22861 ggcggtcgtg atgttgtagc ggcggtattg cgaaggctgg atgttttgct catcgtacac
    22921 gacgcaggac gcaatagtgg cctcgccttg tgtgtggctg atgtcgaaac attcgaggcg
    22981 gttgaggccg tctgaatcca taccgaggat tttggcgagt tcgtcgatac ggtgttgctg
    23041 gctgctttgt tgcaggcggc gttgggcaat tgccatttgt gcgttttgct ccgccatttt
    23101 caaccagact ttgcgttcgc ctatggtttt ggtaacgaac tgcatttgtt tgccgtgttc
    23161 gctctctagg gcttctttca atgcgtcggg catggggaag ttgctgatga tgatgtcggg
    23221 tttgcttttg cccagatagt gttgggcgac gaaggcttcg gcgtagtctt gtccgtttgg
    23281 ttcgggatcg tttttggtgt cagggaaaaa acttttatcg ccgacgtgcc gtccgccgcg
    23341 gatgctgacc cagtgtacgc agacgatgcc gtctgaaacc gccagcgcga gcaggtcgat
    23401 atcgttggga ttgttcggat ttttactgtc gataaactga ttactctgca tgatgccgag
    23461 tgcttggatt tggtcgcggt agcgggcggc ttcttcaaac tgcaaattcg cggcggcggt
    23521 ctgcattttg tgttgcaggg tgcgggtcag ttcgtcggtc ttgccgttga gaaaagtcga
    23581 ggcctcgcgc acgctgtcgt ggtagtcttc ttcgctgata tggccgacac agggtgcgct
    23641 gcagcgtttg atttgataca gcaggcaagg gcggtcgcgg tgttcgaaca cgctgtcttc
    23701 gcaggtgcgc agcatgaaga ctttttgcag gacttggatg ctgtcgcgca cggcgttgct
    23761 gttaggatat gggccgaaat attgattagg ctttttcagc gtgccgcggt aatacgccat
    23821 ttgcggatat tgatggccgc tgagcatcaa ataaggatag cttttgtcat cgcggaaaag
    23881 aatattgtat ttgggcgaca gggctttgat gaagttgttt tcgagaatca gggcttcgga
    23941 ttcggagcgg gtgatggtgg tttcgatgtg gtgaacctgt ttcaccatca atgcgatgcg
    24001 cggggaatgg tcgtttttct ggaaatagcc ggacacgcgc cgcttgaggt tgacggcttt
    24061 gccgacgtat aagacgttgc cgctttcgtt gaaaaaacgg tatacgcctg gcaggttggg
    24121 caggtttttg aggaaaagtg ggatgtcgaa gtgttccgga aaacgggttt ctttattcat
    24181 atcaattact tgaaaaacgg tttcagacgg catattacca tatcgctgga gacagcctta
    24241 tccgttcgga caaggctgca gggcggttac atgctgctaa tcgattttta cccgtttcag
    24301 gcgcaaggca ttgctcaaca cggaaaccga gcttgccgcc attgccgcgc cagcgatgac
    24361 gggatttaaa aagccaagcg cggcgagagg aatgcccaag atattgtaga agaaggcgaa
    24421 aaacaggttt tgcttgatgt ttttcaaagt ggcttgcgac accagcagag catcggcgag
    24481 ttggttgacc gaatgctgca tcagcgtggc ggatgcggta tgttcggcaa cgtccgctcc
    24541 gcctttcatg gcgaagctga cgttagcggc ggcaagcgcg ggcgcgtcgt tgatgccgtc
    24601 gccgaccatc gccacggttt tgccggcggc tttgagtttt tgcacttcgg cagctttatc
    24661 gcgcggactc atgttgccga aggcgtgtgc gatgcccagt tgtttggcga cgtattcgac
    24721 cgtgccttgg ttgtcgccgc tcataatata gacatcgata ttgtgttttt tcagacggcc
    24781 tatggcttcg gcggtatcgg ctttcaacgc gtcggcaagt gcgaatgcgc cgatgggttt
    24841 gttatcgacc gagactgcaa caatgcttgc aatgtcccaa acgccgtctg aaaactcggg
    24901 caaggtaagt tcggcaaatt cggctttgcc tgctttcacc aaacccacgt cttccacttc
    24961 ggcggcaatg cctgcgccga caacggtttg agcgttttgt gcggcaggga tttccaagct
    25021 gcgcgtttgg gcggcggaaa cgatggcacg ggcaagcgga tgagtggcgt tttgttcgac
    25081 ggcagcggcg atgcggtaca aatcgtcttc gtcaaagccg ctgtcgggaa cacaataaac
    25141 ggcggcaacc tgcggcctgc cttcggtcag cgtgccagtt ttgtccaaca caacggcatc
    25201 gacgtgggcg gcttcttcca ttgccgctgc gtctttaaac caaatgccgt gtttcactgc
    25261 tttatccatg ccgaccataa tcgcggcggg tgtagccaga ccgagcgcac acgggcaggc
    25321 aatcaccaaa acggcgacgg cgtgcatcag cgcaaccgtc caatcgccct taatcagcca
    25381 agtaacaata aaagtcaaca acgcaatgcc cacgacggca ggcacgaata ccgcagccgc
    25441 tttatcggct acgcgcgcaa tcggtgcttt actgccttgt gcttcagaga gcgcgttcat
    25501 catgtcgccg agctgggttt ggctgccgag ctgcgtggcg cggtacacca cactgccttc
    25561 ggtcattaac gcgcccgcca acactttgcc gcccgccttt ttttcttcag gattggattc
    25621 gccggtaaga tggctctcgt ccgcccaacc gctgccgctt tcaatgatgc cgtctgcggc
    25681 aatgcgttcg ccgtggttgg cgcggataag gtcgccgatt tgcacttggt cgatgggaag
    25741 ctgtttccat tcgccgttgc gttgcacgtt gacttgggtt ggtgtaagtt tcaaaagcag
    25801 gcccaagctg ttcaggctgg attttttggt acggtgttcc aaaaatttgc ccagcgacac
    25861 aaaaccgatc accatcacgc ctgcttcaaa atacacatgc gccatgccgt gtgccgcatg
    25921 cggactgaaa aataacatat agacggaata cagataaatc gataccgtgc cgatggtaac
    25981 gagcacgtcc atattcgcca atccaccttt aatactcgcc cacgcgcttt tgtaaaacgg
    26041 gattgtcagc caaagctgca ccacactcgc caatgcgaac tgccacaacg gcggaatcat
    26101 ccaatcgtgt ctgccgatca tcatccccgc catgccgata aggaacggga cgttgatggt
    26161 gaacagcagc cacagccgcc agccgatatg gtgttctgct tcgggttgcg gcaatgtatc
    26221 ttccgttttt tccttcgcgc cgtaaccggt tttctcaatg attttggcaa tgtcggctac
    26281 tgaggttttg ctgtcgtcaa acactacctg cgcctcctcg ctggcgaagt tcactcccgc
    26341 cgattcgaca aaatcttttt tgttcaacac tttttcaata cgcgaagcac atgcctgaca
    26401 ggtcatgcct tcgatttgga aacggatttt ttgttgcata agcgtgattc ctgctttgat
    26461 attcagacgg cagtcaaggt tgcgggatgc cgtctgaacg cccgtatggt cgaaatttct
    26521 caaacgcgcc gataattcga gtagaatccg aaaacttgac acagcaaagg aaaaacaatg
    26581 tcccaacacc gcaaactgat tattttgggt tccggccccg ccggatacac cgccgctgtc
    26641 tatgccgcgc gcgccaattt aaaccccgtc attattacag gtatcgcgca aggcgggcaa
    26701 ctgatgacca ccaccgaagt ggacaactgg cctgccgatg ccgacggcgt gcaagggccg
    26761 gaattgatgg cgcggtttct cgcccacgcc gaacgtttcg gaacggaaat catttttgac
    26821 caaatcaacg ccgtcgatct gcaaaaacgc ccgtttacac tcaaaggcga tatgggcgag
    26881 tacacttgcg atgccctgat tgtcgcaaca ggcgcgtccg ctaaatacct tggtttgccg
    26941 agtgaggaag cgtttgcagg gaaaggcgtt tccgcttgtg ccacctgcga cggtttcttc
    27001 tacaaaaacc aagatgttgc cgtagttggc ggcggcaata cggcagttga agaggcactc
    27061 taccttgcca atatcgccaa aaccgttacc ctgatccacc gccgcagcga gttccgtgcc
    27121 gaaaaaatca tgatcgacaa actgatgaaa cgcgtggaag agggcaaaat catcctcaag
    27181 ctggaaagca acctgcaaga agtactgggc gacgatcggg gcgtaaacgg cgcattatta
    27241 aaaaacaacg acggttctga gcaacaaatt gccgtcagcg gcatttttat cgccatcggg
    27301 cacaagccga ataccgatat tttcaaaggt cagttggaaa tggacgaagc tggttacctg
    27361 aaaaccaaag gcggcacggc ggacaatgtc ggcgcaacca atatcgaagg cgtatgggcg
    27421 gcgggcgacg taaaagacca tacctaccgt caggcgatta ccagcgcggc ttccggctgt
    27481 caggcggctt tggacgcgga acgctggctg ggcagccaaa acatttgaat gccgtctgaa
    27541 accgaaattt tcggcggaat gcaaattttt cgcaccaaat ccttgattcc gtcggcaaac
    27601 cccaatataa tgcctgctct ttgaaccttg ccttctgctt tcgcatggca gaaggctgtt
    27661 tttaccatcc ataaggagat aacatgcgtc attacgagat cgtgtttatc gttcatcctg
    27721 atcaaagcga gcaagtgcct gctatggttg aacgttacaa aaccatgatt gccgaagcaa
    27781 acggtaagat tcaccgtttg gaagattggg gtcgccgcca actggcttac ccgattaaca
    27841 aaatccataa agcccattac gttttgatga acatcgaaac cactcccgaa gtggttgaag
    27901 agttggaaac cgcattccgt ttcaatgatg cggtattgcg ccatctaacc atcaaaacca
    27961 aacacgccgt taccgaagca tcccctatgt tgggtggtga aaaggctaag aacctgctga
    28021 gcggtgcgtc tgaagaagcg gctgcccaat aattgggatt caataatctt gtttcgcttg
    28081 ccgcgttgat tgaaaaggtt ttccctattc gatatacgcc tgccggaatc tctgtcttag
    28141 atattatttt aaagcatgaa tcatggcagg aggaaaacgg gcagcaatgc cttgtccaat
    28201 tggaaattcc ggcacggatt ttaggcaggc aggcggaaga gtggcagtat cggcaaggtg
    28261 tatatgttca cgtcgaaggt tttttagctc aaaaaagcag acgttccctt atgccgatgc
    28321 tcaggataca aaatattcaa gaatataaag gttaaacgac aatggctcgt caatcattca
    28381 aacgtagaaa attctgccgt ttcacggctg aaaaaatcca agaagtcgat tacaaacaag
    28441 ttgatttgct gaaagacttt atctctgaaa acggtaaaat cattcctgca cgcatcacag
    28501 gaacgaaggc attctaccaa cgccaattgg ctgttgccgt aaaacgcgca cgcttcctgg
    28561 ctctgctgcc ttacaccgac caacacaaat aattttggag attgaatcat gcaaattatt
    28621 ctgttagaaa aaatcggcgg tttgggcaac ttgggcgaca tcgtaaccgt taaaaacggc
    28681 tatgcccgca acttcttgat tcctgctggt aaggcaaaac gtgctactga agcaaacatg
    28741 aaagagtttg aagcacgccg tgccgaattg gaagccaaac aggccgaaat tttggcagat
    28801 gcccaagccc gtcaggaaaa attggatggc caaaccatta ccgttgcaca aaaagccggt
    28861 gtggacggtc gtctgtttgg ttccgttacc aatgctgata ttgcggctgc aatcgttgcg
    28921 actggcatcg aagccgtgaa agcaaatgta cgtctgccga acggtcctct gaaagccgtt
    28981 ggcgagtacg aagtggaagt ggctttgcac actgatgccg ttgctaaaat taccgttgcc
    29041 gtcgttgccg caaccgagta attgaaatta tcagatgccg tctgaaaccc tgccgattgt
    29101 cggaatgtgg tttcagacgg tatttgtttt gttttccgta tattctgcaa aggtctcggt
    29161 caggttgtct gtccttttgt cggaacagga gactgggcag ctttgtcctg attaattact
    29221 tgtgcaaacg gtaaaaaggt tttttcgtgt gttttaaagc aggttgtaca gcatttttcc
    29281 ggcaatcaaa agcaacataa tgccgaagga ttttttgagt ttggcagaag aaagtttgtg
    29341 ggcggttttg acaccgagcg gggcaaaggc aatggttgcc gcgctgagga cggcgacggc
    29401 gggcaggtaa aggaagccca gtgacccttc gggcaatcct gcaatattca ggccgttgag
    29461 cagatacgat attgcgccgg agagtgcaat cggccaggca aggccggatg atgtgccgat
    29521 ggctttatgg gcggggaagc cgcagtggat taagaagggg acggaaagtg aaccgccgcc
    29581 tatgccgacc cagctcgaca ttgtgccgaa cagtgtggaa accgcagtca gtccgggcag
    29641 tccgggcagc gggcgggatg ccgtctgagg gtcggtatgc agtgttttga atgcgacggc
    29701 ggttaaaaac aggatgaaga aaatttgaag cccgaacgct gggatatatt ttgcggagag
    29761 tgcgccagcg aatacgccga ataccatacc cggcatcatc gtaaatacgg ttttccagtc
    29821 gaccgcctgt tttttgtgct gccccagcat actggaaaag gcggtgaaga ccatgacggc
    29881 gaaggatgtg ccgacggcga ggtgttgcgc gtaaggatgt tgtgccaaac cctgcaaatc
    29941 aagcacccat aaaacgacag ggacaatcag cgtgccgccg cctacgccga acaggccggc
    30001 aataaaacct gccgcactgc ctacggcaag caggattaag ataatgtccc aatgccacat
    30061 ttaatccgcc tttctgtatt ttttccagaa tcggcgtgcc gccataatgt agccggacag
    30121 gctgtatccg agaaagaaca ggaagaggac gagcgacggt tcccaagtga ccagaagcag
    30181 cagtaagacg gcaagcagca ttccgacaaa ggggacttgt ctgcggatgt tgatttcttt
    30241 aaaactccaa aaagggattt ggacaatcat cgacaggccg gcaaacagtg tgatgcccaa
    30301 tgcccaccag tggacggcgg ggaatttttc gacgctgtgg ttgacccaaa tcagcccgac
    30361 aatcagcgcg gcggcagtcg gactgggcac gccgataaac cagcgtttgt ccaccttgcc
    30421 gatgagcgtg ttgaacagcg caaggcgcag ggcggcgcag gcgcagtaga tgaaggcgac
    30481 ggaataaccg attttgccga actgccaaag ctgccatttg taggcaatca gagcgggagc
    30541 aacgccgaag ctgaccatat cggcaaggct gtcgagctgc tccccgaacg cgctttggct
    30601 gttggtcagc cgcgccacgc gcccgtccat accgtccagc aacatagaga tgaataccgc
    30661 gatggcggcg gtttcataac gtccgtgcat ggattgggtg attgcgtaaa atgcggaaaa
    30721 cagcgcggcg atggtaaagg agttgggcag caggtagata ctgttttgac gcagggagcg
    30781 ttgcggggtg ttggtcgggg tttccatagc tgaagtgtct cacggacgtg gagaatcgat
    30841 aggggattat aacccaaacc attatcgaac aatacgccct ttaggatgaa gccctcggag
    30901 gcggtttgtt tttctgatgg cggatgcttt gcggggcggt ttgactctgc ctgccaccgg
    30961 gtgtgttgtt tcggattttt gccggatgga tattgttgcc gggcatttct gggcttgccg
    31021 gaaggtatcg gggggagggc atcggaatat gcggcgcacc gttcaaaccg gggcggcgtt
    31081 tccctatttt cggggagttt gcaggcttca acaaattgaa agatattttt tgcatttccg
    31141 accgtatgct gattttgaaa cgggataaat tataggacaa ggtttttcgc ccgccgcaaa
    31201 ggttggccgc aatgccgtct gaaaacaacg gcttgccgct aaggcggcgg tatgcggatt
    31261 tgcgctgctg aaatcggttt gccatacccg gcggtgcaat ctgcggggag ggataagccg
    31321 ataaggcggg acttatcctg ttttttgttt ataatgcaac agaatttgga cgaaccgtcg
    31381 ggaatttatc atgatgaaaa agatactggc cgtatcggca ctatgcctga tgactgcggc
    31441 ggcacgggct gccgatactt acggctatct cgccgtttgg cagaatccgc agaatgcgga
    31501 cgatgttttg caggttaaaa ccacaaaaga agattcgacg aaaagcgaag cgttttccga
    31561 gttggaagcc ttctgcaaag gtcaggacac gcttgcgggc attgctgaag acgagccgac
    31621 cggatgccgg tcggtcgtgt cgctgaacaa tacctgtgtc gcgctggcat acccgaaagc
    31681 cttgggcgcg ctgcgtgtcg acaacgccgt cgtgattact tctccgcgtt ttacgagcgt
    31741 tcatcaggtc gcactcaacc agtgcatcaa aaaatacggc gtacagggac aatgcggctt
    31801 ggaaacagtg tattgcacat cttcttctta ttacggcgga actgtgcgct ctttgattca
    31861 aaatctcaaa taaaacggaa aatgccgtct gaaagatgtt cagacggcat ttctatatcg
    31921 acggtcagga ttctttcgga tcgggcagca ggctgttcaa cataatggca agtacggcgc
    31981 acaagcccac gccggcaaag ctgaagctgc ccaatttgag cgtcatgccg ccgatgcccg
    32041 tggtcagtac cgagctgacg atgaccaggt ttttcggcag catcaaatcg actttggcat
    32101 caatcagcgt tttcacgccc aaagaagcaa tcgtgccgaa cagcagcagc ataatgccgc
    32161 ccattactgg catcggaatg gaagccaaaa acgcattgaa tttgccgaaa aacgccatgc
    32221 agacggcaaa aaccgccgcc caagtcatga tgacggggtt gctgtttttg gtaatcatca
    32281 ccgcacccgt tacttcgccg taggtcgtaa ccggcgggcc gccgatcaga cccgcaacgc
    32341 acacgcccaa accgtcgcct gcaagggttt tgtccaagcc cgggtctttc gtatagtctt
    32401 tccccgtcac attgccgatt gccatgatgc cgccgatgtg ttcgatggcg ggggcgacgg
    32461 caacgggcag cataaacagt gccgcctgcc agttgacctg aggcgtttca aaatggggaa
    32521 cggcgaacca gggcgcgtgt gcaatgcttg ccgtgtccac cagtcccatc agcagtgcca
    32581 aaacataacc cgaagcgaca ccgatcaaga taggaatcag cttcatcatc ctgctgccga
    32641 aaaccgatac gatggcggta acggcaaagg taaagccgga aagaatcagt gaatcggtat
    32701 agtcgatgac ctgtttgccg tccgcctgac ccattgccat gctgcttgcc gccacggcaa
    32761 cagacagacc gatgaccatg atgacggggc cgatgacgac cggcggcagc agtttgtgta
    32821 ccgccgccag tccgcgccaa cgaattagca cggcaaacac aaaatacata aagccggcgg
    32881 caaacagtcc gaacatggtg gaaggcagcc cccattctcc gatggagtag ataatcggtg
    32941 cgataaaggc aaacgaagaa ccgagaaaaa tcggcacttt acgtttggtt gtaatttgga
    33001 acagcagcgt tcccaagcct gcgcccaaaa gcgcaagagc cggattcaga ccggtcagca
    33061 ggggaaccag caccattgcg ccgaatgcca caaataaaat ctgtgcaccg gaaacggcaa
    33121 gtttcagttg gttcatacca tcttctttca atcggttcaa acggcacgga ttatactggt
    33181 ttgccgaggg tctgcgtaaa aatacatacg tcgggcaaca gatatgccgt ctgaaaggca
    33241 atgtctgtct gttgcaggat gaaagcagga gaaatggagt ataatccgac actttccata
    33301 ttcaatccgc aagccgtccg gcttccttat ttcagacggc attttccggt aatacggcat
    33361 gacagaaaaa tcccataaaa aaacagcaaa aggcagggcg ggaagcccgt ccccaacgtc
    33421 cgcacgcaac aagaaagccg acaacggcgc acggggcaat aaagtttccg agcggctcaa
    33481 ggcggtcaaa gagttgcaga aaaccgaaac caaaaaggcg cgtcccgaac atgtcgtcaa
    33541 ccttatcggc gacgcactgt ggctgatggg tttggcggca accctgtatt tggcgatttc
    33601 cctgatcagt ttcgatatgg gcgatccgtc ttggtcgcac agttcgccgg ttgtggaaga
    33661 tgtcgccaat tggggcggac tgttcggcgc gtatgttgcc gatgtcggct attatctttt
    33721 cggctggtcg ttctggtggt ggatagcggc tgcctgcgtc gtgctgtata aaaatttccg
    33781 cctgcacgca aaacagacgg aaaacgaggc atacaaccac aaaatcgctg ccgccgcgct
    33841 gtttgtcctg acggtcttca gccccgtctt ggagtatttt gtgctgggcg gaaaatatgc
    33901 cgactccctg cctgtcggag caggcggtat ggtcggcata cgcgtcggcg cagtgtttgc
    33961 gtggctgctg gggaaatcgg gcagcctgct gattatcttg gttgttctgc tgttgtcgtt
    34021 gtccctactg gtgcagattt catggctgga atttttgaac ggtgcaggca gggcggttca
    34081 aaaccgcctg agtgccttat ccggcaaggt catggcttta ggaaaacgcc ggccgaatac
    34141 caaaacagac ggtgtcgata cccaaaatac acggcgcatg gtaaaagaag ccaagaatat
    34201 tacggccaaa cccgttgcct tgcccgaagg cagcagcagc aaccgcaaat ccgtcgcggt
    34261 ttccgtcgcg ccgccgccca aaattcaggt ttctctgttt gaagatgacg aacctcggca
    34321 ggcgggcgaa taccacaagc ctacattgaa cctattgcgg attcccgaca gcgagcccgt
    34381 cagcatcaat cccgccgaat tggagcgcac tgccgaacta atcgaatcca agctggcaga
    34441 attcggcatc ggcgtacaag tcgtatccgc cacatccggc cccgtcatca cgcgctacga
    34501 aatcgaaccc gcgcaaggtg tcaaaggcag ccaaattgtt gccttgtcga aagatttggc
    34561 acgctctatg tcgctgcaat ccgtgcgtat cgtcgaaacc atcgccggga aaaacacgat
    34621 gggcatcgag ttgcccaacg acaaacgcca agacgtgatg ttgagcgaaa tcttgtcctc
    34681 gcccgtgttt gccgaagcca aatccaagct gaccgtcgcg ctgggcaaag acattgccgg
    34741 tacccccgtt gtcggcgact tggcgaaaat gccgcacctt ttggtcgccg gtatgactgg
    34801 ttcgggcaag tccgtcggcg tgaacggcat gattatgtct atgcttttca aagctacgcc
    34861 cgacgaagtc cgcttcatta tgatagaccc gaaaatgctc gagttgagca tttacgacgg
    34921 cattccgcac ctgctctgtc ccgtcgtgac cgatatgcgc gaagcagggc aggcgttgaa
    34981 ctggtgcgtc gccgaaatgg aaaaacgcta ccgcctgctt tcccacgccg gtgtacgcaa
    35041 tctggaaggc ttcaaccaaa aagtcgaagc cgcaaaagcg gcaggcaagc ctttgcttaa
    35101 tccgttcagc ctgaaccccg acgagcccga gccgctggaa aaactgccgt tgattgtggt
    35161 cgttatcgac gaacttgccg acctgatgat gaccgaacgc aaagccgtcg aacagcaaat
    35221 cgcccgtctc gcccaaaaag cgcgcgccgc cggtatccat atgattgtcg cgacccaacg
    35281 tcccagtgtc gatgtcgtta ccggcctgat taaagccaac atcccgacgc gtatggcgtt
    35341 taccgtgcaa agcaaaatcg acagccgtac catcctcgac caaatgggcg cggacgaact
    35401 gctcaaatat ggcgattcgc tgttccttca gcccggcagt gccgaaccga cccgcctgca
    35461 aggcgcgttt gtttcagacg acgaagtaca tcaagtcgtc aactacgtca aatcgcaagc
    35521 cccagccgac tatattgaag gtctgctcag cggcgaggcc gcgctggaaa ctgccaatat
    35581 cgttaatccg aatgcagaca gcgacgaatt gttcgatcag gcagtcgcct atgttttgga
    35641 aagcaaaaaa acctccattt cgtctttgca gcggcagttg cgtatcggct ataaccgcgc
    35701 ggcaaacctg atggaggcac tggaaaatgc gggtgtcgtt tctcccaccg acctcaacgg
    35761 cagccgtaaa attttggcgc acaaggacca tttgtagccc gtattgcaaa atgccgtctg
    35821 aacggcggaa ttggcgtttc agacggcata ttatgtttca ggcgaaacat tgtgatatac
    35881 ttgccagcta aaatttcccc tttgcggcaa tgcggttcaa atatcgtacc gttgcgctgt
    35941 ttgcttcccc atgtagggaa gaaagtttat cattttatca acacaacaaa tttaagggct
    36001 tatgatgagc gtaactgttg aaactttaga aaatctggaa cgcaaagtag tgttgtccct
    36061 gccttggtcc gaaatcaacg cagaaaccga taaaaaactg aaacaaactc aacgccgtgc
    36121 aaaaatcgac ggtttccgtc cgggtaaagc acctttaaaa atgattgccc aaatgtacgg
    36181 tgcgagcgca caaaacgacg tgatcaacga gctggtgcaa cgccgcttct acgatgttgc
    36241 cgttgcccaa gagttgaaag tggcaggctt cccccgtttt gaaggcgttg aagaacaaga
    36301 cgataaagag tctttcaaag ttgccgccat ttttgaagtg ttccccgaag tcgttatcgg
    36361 cgatttgtct gcacaagaag ttgaaaaagt aaccgcttcc gtcggtgatg ccgaagtgga
    36421 ccaaaccgta gaaatcctgc gcaaacaacg tacccgcttc aaccatgtcg aacgcgaagc
    36481 tcaaaacggc gaccgcgtca tcattgactt tgaaggcaaa atcgacggcg aaccttttgc
    36541 aggcggcgca tccaaaaact acgccttcgt attgggcgca agtcaaatgc tgcctgaatt
    36601 tgaagccggc gtagtcggca tgaaggctgg cgaaagtaaa gacgttaccg tcaatttccc
    36661 tgaagactac cacggtaaag acgttgccgg taaaactgcc atgttcacca ttacgctgaa
    36721 caacgtttcc gaagcgactc tgcctgaagt cgatgcagat tttgcaaaag ccttgggtat
    36781 tgcggatggc gacgttgcca aaatgcgcga agaagtgaag aaaaacgtaa gccgcgaagt
    36841 ggaacgccgc gtaaacgaac aaaccaaaga atccgtaatg aacgcgctgc tcaaagccgt
    36901 agagctgaaa gcacctgttg ctttggtaaa tgaagaagcc gcacgcttgg caaacgaaat
    36961 gaaacaaaat tttgttaacc aaggtatggc tgatgctgcc aacttggatc tgcctttgga
    37021 tatgtttaaa gaacaagccg aacgccgcgt gtctttgggt ctgattttgg ccaaactggt
    37081 tgatgaaaac aaactggaac cgactgagga gcaaatcaaa gccgttgtcg ccaacttcgc
    37141 agaaagctac gaagatcctc aagaagtaat cgactggtac tacgcagagc cttcccgcct
    37201 gcaagccccg acttctttgg cgatagaaag caacgtcgtt gatttcgttt tgggtaaagc
    37261 caaagtaaac gaaaaagctt tgtcttttga cgaagtgatg ggcgcgcaag cctgattatc
    37321 ctgaaaatgc cgtcttaggg cagtttttga aagcaccgaa gccgctttta aagcccgctt
    37381 tggtgctttt acatcatgaa aggagacgaa atgtcttttg ataactatct tgtccctacc
    37441 gttatcgagc agagcggtcg cggtgagcgt gcattcgata tctattctcg gcttttgaaa
    37501 gagcgcatcg tattcttggt cggcccggta accgacgagt ccgccaatct ggtggttgcc
    37561 caactgttgt ttttggaaag tgagaatccg gataaggata ttttcttcta tattaactcg
    37621 ccaggcggtt cggtaacggc cggtatgtcg atttacgaca ccatgaattt tatcaagccc
    37681 gatgtatcga ctttgtgctt ggggcaggca gcaagtatgg gcgcgttctt attgtcggca
    37741 ggcgaaaaag gcaaacgttt cgccctgccc aacagccgga ttatgattca ccagccttta
    37801 atcagcggcg gcttgggcgg tcaggcatcc gatattgaaa ttcacgcacg cgaactgttg
    37861 aaaatcaaag aaaaactcaa ccgcctgatg gcgaaacatt gcggccgcga tttggcagat
    37921 ttggagcgcg acaccgaccg tgataatttc atgtccgccg aagaggctaa agaatatggt
    37981 ctgattgatc aaatcttgga gaaccgtgct tctttacagt tttaataaga aatctgagag
    38041 aaacaaatgc cgtctgaaaa cagttcagga cggcatttgt cttataggga ctgtataggg
    38101 atgattttgt tctggttgcg tttggagccg ttttcaccat agttggtttt gacatattcc
    38161 tctacaatag ctaggaattc agttgcaata ttatcacctt tcagtgtgac tttgcgctcc
    38221 ccgtccacat aaaccggcgc gacgggtgtt tcccccgtac cgggcaggct gatgccgatg
    38281 tcggccaatt tgctttctcc gggcccattg acaacgcagc ccattacggc aacgttcagg
    38341 gattcaaccc cgggataaag ggtacgccat atagacattt tttggcgcag gtaattttga
    38401 acatcttgtg ccagctcttg aaatacggta ctggtggtac gcccgcagcc ggggcaggcg
    38461 gtaaccatcg gcgtaaacga acgcaatccc atagtctgta aaatctcttg cccgacgacg
    38521 acctcctgag tacgcgggct gccaggttcc ggagtcagtg aaatgcggat ggtgtcgccg
    38581 attccttctt gaagcaagac ggataatgcc gccgttgatg cgacaatgcc tttgctgccc
    38641 ataccggctt cggtcaaacc caaatgcagc ggataggcgc aacggctgcc cagttcgcgg
    38701 taaacctgaa tcaaatcctg aaccgcgctg actttgcacg acaggatgat tttgtcttcg
    38761 ggcagtccca atagaacggc tttttcggca gattccaaag cggagacaat cagtgcttcc
    38821 ttcgtcactt cttcgggcgg tttcggcgcg gaaaaagcga ggttggcatc catcatacgt
    38881 ttggcgaggc tttgatccaa agaaccccag tttacgccga tgcggacggc tttatcgttt
    38941 tcagcagcag tccgaatcat aaaggcaaat ttttcatcgc cttttacgcc tttgccgaca
    39001 ttgccgggat tgatgcggta tttggacaat gctttgccgc attcgggaaa ttccgccaac
    39061 aggcgttcgc cgttgaagtg gaaatcgccg ataagcggtg tggcatagcc catatcgtcc
    39121 aagcggcggc ggatttcggc aactttggac gcggcttcgg ggctgttgac ggtaatacgc
    39181 accatttcgg atccggcatc gctcaattcc ttaatctgca atgcggtggc ttttgcatcg
    39241 gcagtgtcgg tgttggtcat agattggata acgacgggtg cttctgaacc gacggtaata
    39301 tgatcgatgc ggacttgatg cgtcttgcgg cgttggagtg tgttcatatg gtttgaatct
    39361 gtttattgac cggtgaggac ggtttgcaat tcttccgagt aggggaaatt cgcctgcaat
    39421 tgtgcttcat attcgtatgc cgcctgtgcg ttgccgaggg ctttggcaat tttccagcct
    39481 agcagcaaat catcggcctg aaggacttct accctgcttt ggtatttttt aaagtagtaa
    39541 tcggcatcgc ccaactgccc ggccagcatt ttggtgcgcg ccagttcttt aaatgcgggt
    39601 gggaactgcg gctgggcggc gagggaacgt ttcaaatagg cttccgccaa tccgaattgc
    39661 ccctgttttg cgctgcatat gcctttattc aggttggcaa tataaggggt cgggtaggtg
    39721 gggtcggcca gggctttgtc gaaatatgcc atagattcgg cagggcggtt gagcctgccg
    39781 cacaggaacc agccgtagtt gttgttgatt tcggcactgt cgggtttgat ggagagggct
    39841 tgccggaaac tttcctgcgc cttgtcgtta actttcaggt attgatagat ttcggcacgg
    39901 accagccagg caagctcgtt tttagggtct gatttcaagg cgtcttcaat acttgccgtc
    39961 gcctgacggt agtcctgacc gcgcatatat tccattgcca actgggtttt gatattggaa
    40021 acctgattgg ctttttctgc ccgcgagggg cggtaggaag tgctgcacgc gcccaaggca
    40081 aggacaagta ataaagagat tcgtttggat ggcttaaaag gcataattac ccctgttgtc
    40141 cgattaaaat ctgctgccat ttttgttggc ggcgcgtttt atcctgaacc tgccccgcca
    40201 actgtccgca ggcggcatcg atgtcgtcgc cgcgcgtttt tcgtacggta acgacaaatc
    40261 ctgcctgctg caaaatatcg cggaacacac ggatgttctc attgctggag cgttcgtatc
    40321 cggagtttgg gaagggattg aacggaatca gattgaactt gcagggaaca tctgtgacca
    40381 gttcgatcag ttcgcgcgca tgttgcgcct tatcgtttat tccgtccaac atgacgtatt
    40441 cgaaagtgat gaaatccctg ggtgctttga ccagatagcg ttggcatgcg gccatcaatt
    40501 ctttcaaggg atattttttg ttcaacggta cgatttggtt gcggacttcg tcattggaag
    40561 cgtggaggga aaccgccaaa gccaccggca tgacatcgcg caacctgtcc atttggggaa
    40621 ccatacccga agtggaaacg gttacgcggc ggcggctcaa accgtagccg tggtcgtcca
    40681 gcatgatgct taaggcggta acgacattgt cgaagttcgc catcggctcg cccatgccca
    40741 tcatgacgac gttggaaata acgcgctcgt ttttcggtgt aacgcccatc gctttgtttg
    40801 cccaccacaa ttgcccgatg atttcggcag cagtcaaatt gcggttgaag ccctgccgac
    40861 cggtcgaaca aaatgtacat tccaaagcgc agccgacttg tgaggaaatg cagagcgtgc
    40921 cgcgatccga ttcggggatg aagacggttt ccaccccgtt gcccgtaccg acatccaaaa
    40981 gccattttcg agtgccgtct gaagattttt gagacatcat cagcttggga atttcgatgc
    41041 ctgcctgttc gttcagttta tggcgcaacg attttgccaa atcggtcatt tcgtcaaaat
    41101 tttgcgcgcc ggattggtgc atccaacgca taacctgttt ggcacggaaa ggtttttcgc
    41161 ccatatcggc aaaatgtcgg gtcagccctt ggaggtcgta gttgagcaga ttggttttca
    41221 tgtatttgtg tttttcttaa attaaggctt caaataaaaa attgcagggc aggcaagttt
    41281 gatttgaagc cttttgcaac agagttttca gacggcatgg atatatttta tgccgtctga
    41341 agaggagttg tgcggtgtat tgtatcaacg ggggcagatt tcggtttggc tgaaaaagta
    41401 ggcaatttcc aaagcggcat tttccggagt gtccgagccg tgtacggcat tgatgctgac
    41461 cgaagtggca aagtccgcgc gtatcgtgcc ttcggcggct tcggaaggat tagttgcacc
    41521 catcagttcg cggtttttca gaacggcgtt ttcaccctct aatacctgaa tcataaccgg
    41581 accgccggtc ataaattcaa ccaatccggc gtagaagggg cggtctttat gaaccgcata
    41641 aaattcttgc gcctctttga gggtaagctg cttcattttg gcggcaacga ttttcagacc
    41701 gttctcctca aagcggctgt atattttgcc gataacgttt ttgccgacgg catcgggttt
    41761 gatgatggag atggtacgtt caatcgccat gctatatcct tatttttact taagaagaat
    41821 caaatcggta ttctatcaaa aaaataactt atccgcctga agccttggga gatagggtca
    41881 ggtgcggctg ttccaaataa acttcggact gcatttcgac catccggctg gcggtgcggg
    41941 taaattcttc ggcaaaatcg ccttctgtat agatatggtt gacatctacc gcgccggtgg
    42001 cacacagttt gacacggaaa tcgtagagta cgtcaatcag ccaagtcagc cgccgtgcct
    42061 ccgccttttc ttgcggtgag agttgttcca aacctgaaat aaaaaccatt tcataatgtt
    42121 cggccaaata caggtagtcg gactgtgagc gggggccgaa gcacagtgcg cggaaatcaa
    42181 accatatggc acggccggac tcggctttgt ggggaatctc ccgaccgtgg atggtgctga
    42241 tgccggggtt caaatcggta atgcctgtca tttctttgaa cagttttgcc agttttgcct
    42301 cattttcttc attggcaggc gtaaagaaaa tctcggcggg gcggagggta cgcagtcggt
    42361 agtcttcacc gccgtcaaca tttaagacgg tcaggctgga ctcgatgagc gcgattgtgg
    42421 gaagaaaact gctccggttt tgaccttgcg ggtagagttc ggaaggcgcg tagtttgaag
    42481 tcgccaccaa aacaacgccc tcgttaagca ggttttccag cagacggcct aaaatcattg
    42541 catccgcaat atcgctgaca tgaaattcgt caaaacacaa tacgcgggtt tctttggcaa
    42601 tctcggcggc aacggatttc aacgggttgc tttcgctttt cagggttttc agccgccggt
    42661 ggatttctgc cataaaggca tgaaagtgga cgcggcgttt gcggcggtaa gggaggcagc
    42721 cgaaaaaagc gtccatcaga aagcttttgc cgcgtccgac cccgccatag aaataaagcc
    42781 ctttggggac ttgcggggaa cgcaaactcc tgcctaaaaa acggtttctt ttgcgtttga
    42841 acatcatcaa ttcggtccaa agccgatcga ggtgttcgat ggcggcagcc tgcgcgtcgt
    42901 cgcggatgaa gttgggcagt tgtgaggcag cctgatacca ggtcagcggg ctgtggtttt
    42961 caaacggcgg ggctttaaaa agttggtctc tactactcat atttaacctt tttatacttc
    43021 ttgcggctaa gaaagaaaat gcttactgtc ggtattataa atgatttcct tcaaacttgg
    43081 cattttccgt ggaaaagaat aatgacgcgc acaagggggt atgagcaaag gcggcgtttc
    43141 aatatggtgc agatatgagc tcaaatgcct tttatagtag attaaattta aaccagtaca
    43201 gcgttgcctc gccttgccgt actatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat
    43261 ttttgttaat ccactataat ccgtagagtc ggcttcttcc ggctcagacg gcatacgttt
    43321 atgccggcac ttcttaccgc cctcgtgccg gctatcccaa aactgctttg aacactgaac
    43381 gctctttggc ttacttcaaa aatgccgcgt gataggcaat atgctcgcca ataaaaccgg
    43441 cgatgaagta atagctgtga tcatagcctt tgtggaagcg cacatcggcc ggttggtttg
    43501 ccgcacgaca ggtttcgata aaatcttggg tacgcaattg tgtcggcaaa aactcatctt
    43561 ccaagccctg atcaatgcgc ataccttgca ccttacagcc ttgtcggatg agcgagtcgg
    43621 catcatattg ctgccatttt tcgcgattct ttcccaaata ggcagaaaag gctttttctc
    43681 cccaaggcac gaggcttggc gataaaatag gcgaaaaggc agaaacactt tgataacgtt
    43741 cccggtttcg cagtgccaat accaatgcgc catgtccgcc cattgaatgt cccataatgg
    43801 aacgtttgcc gttggtagga aatttttcct caatcagact aggcaactca ttcaaaatat
    43861 aatcatacat ttgataattc gtcacccaag gctgctcggt cgcattcaga taaaagcccg
    43921 caccctgccc taaatcgtaa gccgcatcgt tcggcacttg ctctccgcga gggctggtat
    43981 cgggggcaac cacaatcact tgatgttctg ccgcataacg ctgaaaacct gatttggtaa
    44041 tgaaattttg ttccgtacaa gtcaagccgg aaagccaata aatcacacca agcggtcgat
    44101 tctccggatt atttggcaaa tagacggcaa atttcatttc gcactgcagc gtttgggcat
    44161 aatgcgccca aacttgctgc aaaccgccaa aaatttgatg ttgctcaatc agtttcatcg
    44221 cgtaccttag taatgaataa cagcgcggat cgatttacct tcatgcatta aatcaaaggc
    44281 ttcattgatt tgatcgagcg tcattgtgtg ggtcacaaac ggttctaact cgatgtcgcc
    44341 tttcattgaa tcttccacca ttttcggaag ctcggagcgg cctttcacgc cgccaaatgc
    44401 agtgcctttc caaacacggc cggttaccaa ctggaacgga cgagtggaaa tttcttggcc
    44461 agcacccgct acgccgatga taatggattg tccccaacca cggtgtgcgc tttctaatgc
    44521 ctgacgcatt acatttacat tgccgataca ttcaaaggtg tggtcgatgc cccatttgtt
    44581 gatgtctaac aacacatctt tgatcggttt atcgtaatcg ttcgggttca aacaatcggt
    44641 tgcaccaaac tgttttgcca actcgaattt tgcgggattg gtatcaatgg cgataatacg
    44701 gccggctttg gcttgacgcg caccttgcac caccgccaaa ccaatcgcgc ctaagccaaa
    44761 cacggcaaca gagtcgcctt cttgcacttt tgccgtatta tgtaccgcac caatacctgt
    44821 ggtaacgccg cagccgagca aacatacttg ttcatggttg gcttcagggt tgattttcgc
    44881 cagtgaaact tcggcaacaa cggagtattc actgaaagtc gaacagccca tatagtgata
    44941 gattggctga ccttgataag aaaaacgcgt cgtgccgtcc ggcattaagc ctttaccttg
    45001 tgtatcacgc actgagacgc acaagttggt tttacctgaa caacaaaact cacattcgcc
    45061 acattcggcg gtgtaaagcg gaatcacgtg atcacccggt tttacgcttg acacaccttc
    45121 gcccacagca acgaccacac ccgcaccttc gtgtccaagc accacaggga atacgccttc
    45181 aggatcgctt cctgataacg taaacgcatc agtatggcac acgccagtgt gggtattgcg
    45241 gattaacacc tcgcctttac gcggcatttc tacgtcgatt tccacaattt gtaagggttg
    45301 gttaggggcg aatgccaccg ccgcacgaga tttgatggtt gaatcggttt gtttcatttc
    45361 cattgtcttt cctcttaatt cattgacaaa gttgccttac ctgagcaaca tagcaacagt
    45421 ttacacttta gagttaactc taaggcaagt gttttttact gtttttgttt agaaggaggg
    45481 aaaatgactt ataccactgc caaagccgcc gaaaaaatag gcatctccgc ccacacccta
    45541 cgtttttacg acaaagaagg cttgttgcct aatatcggac gtgatgaata cggtaaccgc
    45601 tgttttaccg ataacgattt gcaatggttg ggcttattgc aatgcttgaa aaatacggga
    45661 atgagcttaa aagacatcaa acgctttgcg gaatgtaccg tcattggcga cgataccatt
    45721 gaagaacgcc tttccttgtt tgaaaatcaa atagaaaatg tgaagtgtca aattgccgaa
    45781 ttaaaacgct atttagattt gcttgaatac aaattggcgt tttaccaaaa agcgaaagca
    45841 ttaggttcgg taaaagccgt aaatttgccg caaattcctg aaacggctta gttttagtgc
    45901 aataagcagg atttttgtcc tgttcgtaat agaaatcaaa aatttgttgt ttaaaaagcg
    45961 gattgtaagc aatgatatag tggattaaca aaaatcagga caaggcgacg aagccgcaga
    46021 cagtgtaaat agtacggaac cgattcactt ggtgcttcag caccttagag aattgttctc
    46081 tttgagctaa ggcgaggcaa cgccgtactg gtttttgtta atccactata aaaaaatcca
    46141 cgctctaatc cgttgcttgc ttggctcaag gtattgaagc agcggatgaa gttaaaccac
    46201 agaaaaaacg ccgcgtaaca gcggcgtttt gatgctaagg tttaattggc attttctttt
    46261 aaagccaagt cgacccgctc gcgcaattct ttaccgggct tgaagtgggg tacatgtttt
    46321 tcaggtactt ccacacgctc gccggttttg ggattgcgac cgatgcgggc aggacgatgg
    46381 ttcaaatcga agctgccgaa accgcggatt tcgatgcgtt gacctcgggc aagcgatcta
    46441 gtcatggtgt caaccaagac ttttacgctg tactctacgt cttttgccag aagatgcgtg
    46501 ccgtttttgg cggcaaacac ttctgccaaa cgaaccatta actcagactt tgtcatgtct
    46561 gcaaccttat tcttgttcgc cggagagttt ggctttcagc aggtcgccca agctggtggt
    46621 gccggcattc gcattggcgg cggcattgac ggagttcagt gcttcgcggc tttctttggc
    46681 atctttggct ttaacggaaa gtttgatgct gcggtttttg cggtcaacgg taacgatgac
    46741 ggcttcaact tcgtcgcctt ctttcagttt ggtggtcaaa tcttcaacgc ggtcggctgc
    46801 aaattcggaa gcaggcaggt agccttctac ttcgtcagac agggcgataa cagcaccttt
    46861 ggcgtcaaca gatttcacgg aacctttaac caaagaacct ttgtcgttca cgctgatgaa
    46921 gttgccgaac ggatcgcctt ccagttgttt gatacccaag gagatgcgtt ctttttccac
    46981 gtcgattgcc aatacgacgg cttcgacttc ttcgcctttt ttgtatttgc gtacggcttc
    47041 ttcgccggat tcggtccagg acaggtcgga caggtgaacc aaaccgtcga tgccgccggg
    47101 caggccgacg aatacgccga aatcggtaat ggatttaacc gcgccggaga ttttgtcgcc
    47161 tttgttgtgg ttggcggcaa attcttccca aggattggct tggcattgtt tcatacccaa
    47221 agagatacgg cggcggcctt cgtcgatttc caaaatcatg acttcgactt cgtcgcccag
    47281 ttgtacgact ttgctcgggt gtacgttttt gttggtccag tccatttcgg agacgtgtac
    47341 caaaccttcg atgccttgtt cgatttcgac gaatgcgccg tagtcggtca ggttggatac
    47401 tttgccgaac aggcgggtgc cttgaggata acggcgggtc agaccgctcc aaggatcttc
    47461 gcccagttgt ttcataccca aggaaacgcg ttgtttttct tggtcgaatt tcaatacttt
    47521 ggcttcaact tcctgaccga cttccaagac ttcactcggg tgtttcacgc gccgccatgc
    47581 caaatcggtg atgtgcaaca gaccgtcgat gccgcccaag tcaacgaatg caccgtaatc
    47641 ggtaatgttt ttaacgatgc ctttgatgac ggagccttct tgcaggtttt ccagcagggc
    47701 tttgcgttct tcacccaaag tggcttccag aacggcgcgg cgggaaacaa cgacgttgtt
    47761 gcgttttttg tccagtttga tcactttgaa ttcgatctct ttgccttcga agtgagaagt
    47821 gtcttttaca ggacgtacgt cgaccaaaga acccggcagg aatgcgcgga tgctgctaat
    47881 cataacggtc aggccgcctt tgacttttcc gttgatgatg ccggacagga tgtcgccgtt
    47941 ttccatggct tcttccaggg caatccaatc ggcagcgcgt ttggcttttt cgcgggacag
    48001 tttggtttcg ccgaagccgt tttcgacgga ttcgatggta acggtaacga agtcgccgac
    48061 tttaacttca atttcgcctt gagcgttttt gaattcagct acatcaatca gggattctga
    48121 tttcagacct gcgtttacgg taacgaagtt ttggtcgatt gccactactt cagcggtaat
    48181 cacctcaccc gggttcattt cttgcagggt aaagctttct tccaacagct gagcaaaatt
    48241 ttccatagac atatataact cttttcggta caccgccaag gggtgcgggg tgggttggtg
    48301 ggtgtctgcc gtccttggca gggcagacgg gtaaataagg tttcagacgg catatggggg
    48361 atttttatgc cgtctgaaac ataatgcggg cgattatacc tgaaaattta aactttacga
    48421 taccaatcaa gcactttttt tacagtttct tctatagtca ggcggctcgt atccaaaagc
    48481 agggcatcgg gttgttgttt caggggggca accttgcggt ttcggtctgc ctcgtctctg
    48541 gcttcgatgt cggacaggat gcgctcgaat gccaaacctt cgcaggggat gccgatttgt
    48601 ttggcgcggc gttcggcacg gattttggat tctgccgtca ggaagatttt aagttcggct
    48661 tgggggaaga cgaccgatcc ggtgtcccgt ccgtcggcga ccagtccttt ttcggtcaga
    48721 aaatcgcgtt ggcgttgcag cagggcggcg cggactttag gcaactgtgc gactgcggat
    48781 gcgcccatgc cgatggcttc tgtccggatg ccgtctgaaa cgtcttcgcc gccgagcagg
    48841 atgcggctgc ctgaaaatac ggcgggcagt ttttttgcca gttcggaaac gttttcttca
    48901 tcgtgccatc ccacgccttg tttttgtgca tatagggcgg tcaggcggta gagtgcgccg
    48961 gtatcgagat aatcgtatcc caatgcggcg gcaacgcggg cggcaaccgt gcctttgccc
    49021 gatgcgcccg ggccgtcgat ggcgatgact ttttgtctgt tcataagggg gattcctgat
    49081 ggtttggggt atgggttttg ccgtctgaag gatgtgtttc ccgttggggc ggattctacc
    49141 tgttttaaag gacgattgtc taagcagacg gaacgccgcc tgcccgaaaa catccgacag
    49201 aagccggcaa gccggttcgg attccggcgt tgcgggtatt gtggcgggca tcaaggcaat
    49261 gctgtctgaa agaggtatga ccttcagacg gcatcgattg ctgcagatta gaacaggttg
    49321 ctgacgaaaa tcagcagaat caccagcggc acaagatatt tcacataagc aaaccaaata
    49381 ttgaccgtcg tatggttgcc tttataaagc aattcgtcct tcgcttcgtc cttcatcaca
    49441 aaaccggcaa acagcgcgga accgagcgcg gtcagcataa acaagatgtt gccgctgatg
    49501 tagtcgaagg catcgaaaat atttttgccg aacacggaaa cgtctttcca cggaccatag
    49561 ctcagaatgg acgggatgtt gccgaaaatg aagatggcag ccaatacaat cgtaatcgcg
    49621 gcggtacggc ggattttggt tttttcctga atggtcgtaa tcaacacttc ataaatggtc
    49681 agcgaagttg tcaacgcggc aatcaggagc agcgagaaga aaatgacggc gaacacagat
    49741 cctgcccaca tatgcgagaa cacaatcggc aaactttgga ataccaaagt cgggccggaa
    49801 tcgggggcaa cgccgaagct gaagagcgac gggaaaatca taaagcccgc aagtatggcg
    49861 atgatggtat tggtaattgc cgtgataact gccgtctgaa ccagattttc gtttttatcc
    49921 aaatagctgg acaaggtaat catcacgccg aaacccaggc tcagggcaaa aaatacctgc
    49981 cccaaaacga agacgaacag ttcggcggta atcttgctga aatcaggttt cagatagaaa
    50041 gcaacccctt ccattgcgcc cggaagggta acgttgcgga cgaccatcgc gattaggaac
    50101 aaaaacagca gcggcatcag ctattttgcc gctttttcaa tgccgccgat aacgcctttg
    50161 accaaaatcc attggttcac ggcgacaaaa agcagcgtat aaaacgcaat ttcccaaggg
    50221 ctgtttcaat gtgttcggca aagaagcctt ttgtaaccac accgtcgatg gggctggaaa
    50281 tattcaaatt tcctccaata atattaacga tatagctgat tacccagccg ccgagtgcca
    50341 tgtaataagc catgatgccg aacgcgccga gcagccccat ccagccgacc agtttccaaa
    50401 ttttagcaat gggtttgccg ttcatcggac cgccgaacgc atccagcgcg ttcacgcctt
    50461 tgcgccgtcc gatgacgttt tccaccaaaa tcatcgggat gccgataacg agcatggcga
    50521 tacagaataa aaacacatac gcgccgccgc cgttttcacc gaccaaatac gggaaacgcc
    50581 acgtcgcgcc gaagccgaca gtcgcgccgg caacagtcag gatataggtt aatcggctgg
    50641 atcaggtttg acgattggta tttgaagggg aagacatatt gaaaccgtgt ccgattgaga
    50701 taaagcggaa attctacacg cgttttttaa caggaattga ctgattgttt ttcaactgtc
    50761 tagtgatttt ccatgtaaaa ggcatatatt tcagtgagta tttctgatga gtataacccg
    50821 atgaggaaga atcggagttt ataaatagat taatttgtta ttcttctaca tcggtgtatg
    50881 gaaatgaaat tttgttaatc acattaatga tagcatttta ataatgatga aagagaggga
    50941 atttgaaata aaaaaccatc tatacaaggg gagaagtata gatggcaaaa cacattacgg
    51001 ggaaaacgtc ttactcataa gcctgcttga acaggcgtta ctcagacaaa tggattatat
    51061 cgtaaattga ttttttgcgt taaattgggt taaaccatat atttaatgag tatgtggatg
    51121 aatataaatg gaattcttgg atgttatttt agaatttcgg acaatcgata aatttccatt
    51181 cgccgggttt caggttttct gtttccaaat gtgcgaatcg ccggcgatga aggtgttgca
    51241 cgcggttgcc tgcggcggcg accatacgtt tgacttggtg gtattttccc tcggtaatgg
    51301 tcaggagcaa tgcggacggg ctttccaata cggcatcggc ggcgtaaacc gtttcgtttt
    51361 cgtcgtggag caggacaccg tttttcaggg tttcgcaaag cgtttcgccg gcagggtgct
    51421 tgagtgtaac ttcgtatagc ttgggaattt ttctgctcgg cgaagtcagg ttgtggttca
    51481 gtttgccgtc gttggtaatc agcaatacgc cggtcgtatc tgcatccagc ctgccgaccg
    51541 cctgcatatc gatgttccgc atattgtcgg ggaacaggct gaatacgctg cggtagtgct
    51601 tgggtttgtg cgaagtttcg taatcttcag gcttgttgag catgatgtag aaatagggtt
    51661 cgggaacgac ggttactgct tccccgtcaa tatccaacgt ttcgacggat gaggaatcga
    51721 tgtctgcatc ggtgtcgtcc atgcaggttc cgttgatgaa aacataaccg ccggcaatca
    51781 gccattggca ctgcttgcgg cttcctatgc cttgatattg caggtatttg ataagtttca
    51841 tgatggtatg ggaaatgtgg gatgaaaaag acaggactga gaaagtcctg tcatgtgccg
    51901 tatccgaatc agcttccaat cagtttgacc ctctgtcccg gattgatggt gttcaggttg
    51961 ggattgagcc ggcggatgtc gtcgatatgg atattgaagc gcgcggcgat acttttgaag
    52021 gtgtcgcctt tgcgcgcggt gtaggatact ttttcaatac gggtttgggc aggggctgcc
    52081 tgcgccaggc ggagtacctg tcctttttgg atggtgttgc ctttgatgtt gttggcgaca
    52141 atcaggtcgg ctacgctgac gttgtagcgt ttggcaatgt tgaacagggt gtcgccttct
    52201 acaacgcggt ggatgctggc atggagcggg gagatttcgg cttcgccgtc ggcagctttg
    52261 gctacgcgcg tttccaaacg tgcccggcgt ttgccgtcgg cggcaacggt atgttgcgga
    52321 gatgaggaaa tgttgtgttc ggcaactgtg tcaggcgtgc cgatgacggc ggagatggtt
    52381 tcttcagcct gtcggcgcag gttgtttcgg gcaacaagct gcatgagttc gtctgccgcc
    52441 tgcatgtcgt tttgggggat gatctgcgcg agtgttgcgg tttgggtttc agacggcatg
    52501 gcggtctgtt tttcggtttg aggttgcgct gcggctgtcg caagggcagg ttcggcaata
    52561 cggacaaggg gatcgggttc cgtacggacg gttttctgcg gcaaaggtgc gacggtaatg
    52621 tccgctgtct gtgcggcggc gggtcggatt cgggcaatgc cgacgttcac cgtgcctgcc
    52681 ggcatattgg aacggtaggt gtcgggcgta ttgtcgatgt cgatggaaac gacggattcc
    52741 gatgccgtct gaagggtttt gccgttcttg gcgacaagga tgctgcgtcc tgcgttgaca
    52801 aggttgccgt tcaggttgtt gaggcgtttg atgtcggcaa tgctcatgcc ggttgccgtc
    52861 gagatgtcgg acaggctggt tttggcggca ggcgtataga cttcccatga aaacaggctg
    52921 tcgggtgcgg cgttgaggta gttgctttgg aaggtttgga cggatgcgac aggaagcagc
    52981 agtttgcgtt tgcttttggg gataaacgcg gggacgttga atgcggggtt tagggcgagc
    53041 agctcgcttt gcgtgatgcc ggcaagccgg acgatggctt cgttgtcgag cggacgatcc
    53101 ggttcgactg cctgaaaata gggtttgttg tctatgtcgc tgatattcat accgaaagat
    53161 tggggagtgg caataatgtt gcgcacggcg agcagcttgg ggacatagtt gcgcgtttcg
    53221 ttgggcatac gcaggttttc gtaggtcggt tcgagccctt gggcgcgggc gcggttgatg
    53281 gcgcgtccga cgttgccttc accccagttg taggcggcaa aggcgagcgg ccagtcgccg
    53341 aacagtccat agaggtattg cagatagttg agtgcggcat cggtggcggc gtaaatgtcg
    53401 tgcctgccgt cgtaaaccgg tgttttttcc aggccgtaat gcctgccggt agcgggcatg
    53461 aactgccaca ggcccgatgc gccgacgtgt gatttggctt tggtgacgaa cgcgctttcg
    53521 atgaagggaa gcagggcggc ttcggcgggc atattgcgtt ttttgacttc gttggcgata
    53581 tggtacatat agggtctact ccggttgatg accctgttga aatagctgtg gcttgcgatg
    53641 aatttgcttt cgtggcggcg taccagttcg ggattgactt cgcccatccg gaagccttgg
    53701 cgcagctcgc tccacaggct gccggattgg aaatattgtt ttgtcggggg caggtcgagt
    53761 attgaagagt ttaagcgcat aatcgccaaa ccgatttggt gtgatgaggt gttttgggcg
    53821 tataggaaac ccggacaaac ggacagacct gacgcggtca gggcgatggt tttgagtttg
    53881 gacatgattt atatcggcgg aataaacata ttttatcgtc cgatggtact gtttgactga
    53941 aaaagcgtca agttttacag gaactttatg cggattcgga agtgggcggc cgatgtgttt
    54001 tttgacagaa attctgtttg gaatagaata tcggcaggca atctgtttga aacggacgca
    54061 atatggatgc atggtttgaa gatacggcga tggggcggta tgttgcaaaa ttggaacagg
    54121 acttcttcgg gcggtatcta gattcatacc gtttttcggg aatgtgtgcg gttcaggtgg
    54181 gcggtccgtg gctgagcctg tctgaagatg ttgtctgtgt gccgcgagat atgtcgatgt
    54241 cggcggagaa tatggctttg gcggatgttt ctgcggatat gctgcttttt ccgcatacgc
    54301 ttgaaggcgg tgttccttcg caaatcctgt cggaagcgca ccggatattg aaaccgtgcg
    54361 gacgtttgat gctgacgggt ttcaatccgt attcgctctg gggattcagc cgttggtttg
    54421 acggcgaacg cctgccggaa aaacggtttt gtctgccgct gcccgagttg aaaaggctgc
    54481 ttgccgatgc cggcttcgat attgaacttg ggaaatttat ggtgtatctg ccgcccgttt
    54541 cgtcgctcgg gcaaatacgc ttttggcagt ttatggaaaa ggcgggcgac cgttggtggc
    54601 cgcaatgtgc cgcagtgtac ggtctggttt tggtcaaaag ggcggcgggc gtaacgcccc
    54661 tgcccgcgtg ggacgggtat ttgggcggca aagcccttgc ggcgggtgcg gcaaggattg
    54721 cggattaggg acagccgtct ttcagacggc atctgtcaga agaaatgtcg ggaggggtta
    54781 tgcctgaatt gccggaagtg gaaacgacgt tgcgcggcat cgcgccgcat attgaaggga
    54841 aaacggtgga agccgtggta ttgcgccaat tgaagctgcg ctggcagatt aatcccgatt
    54901 tgggggagat tttgtccggc cggcaggtgt tgtcctgcgg caggagggcg aaatacctgc
    54961 ttatccgctt tcaaacgggc gtgctgctga ttcacttggg gatgtcgggc agcttgcgga
    55021 tttttacgcc gtcggacgga cgtatcggca ggccggacag acacgatcac gtcgatattg
    55081 tgttttcaga cggcacggtc atgcgttacc gcgatccgag aaagttcggc gcgatacttt
    55141 ggtatgaggg aatcgaagaa catcatccgc tgttggaaaa actggggccg gagcctttgt
    55201 cggaggcatt ttgcacggat tatctgtatg tgaggctgaa ggcgcagaag cgcgcggtca
    55261 aacttgccct gatggacaat gcggtcgtgg tcggtgtggg caatatttat gccaatgaga
    55321 gcctgttcag agcgggcatt tcgccccacc gtcctgccaa ccgtctgaaa aagaaagagt
    55381 gtgcgctttt ggttgaaacc gtcaaagcgg tgttgcggcg cgccattgaa acgggcggca
    55441 gtaccttgag ggattttgtg gacagcgacg gcaaaagcgg ctacttccaa caggaatata
    55501 cggtgtacgg gcggcacaat cagccgtgcc cccagtgcgg cggtttggtt gtgaaagaaa
    55561 ctttggggca gcgcggcacg ttttactgcc cgaattgtca gaaatagggc ggaaaacggt
    55621 ttcagacggc attttatcgg tatgccgtcc gaacgtttca acaacaaaca ccgattatcg
    55681 ggaaagaatt gttcatgtct tcaaataaag cttcattttt tacacgtctg cgccgcttgt
    55741 gccgcttgac ggtctggcta ttcaaaaccg gcaaaaacct gcgcggtatt gacggcggct
    55801 gccccgagtc gcgcaatcgg gcggtaatcg agttgggcag gggggctctg acggctttgg
    55861 atatcggatt ggaggtgggc aggcccgcac ccgaacatcc gaacggtgtc ttggttgccg
    55921 ccaaccacgt gtcctggctg gatattttcg cgatgagcgc ggtttatccg agcagcttta
    55981 tcgccaagca ggaaatcaaa agctggccgg tattgggcaa gatggggcag aacgcgggaa
    56041 cggtgttcat caaccgcaat tcgcggcgcg acatcgaacc gattaaccgc gccgtctacg
    56101 aaaccttgca acgcggtcaa aacgtcagtt ttttccccga agcgcggact tcctccggac
    56161 tggggctcct gccgttcaaa gccgcgctgt tccaatccgc cattgatgcg ggggcaaagg
    56221 ttttggcggt cgcgctgcgt tattatgacg aaacgggaaa aaggacggct cgtccctcat
    56281 atgccgatgt cggtttgccg acctgcctgt ggcgcattgt gtctatgaaa aaattaacga
    56341 taaaagtcga tttcgtttgc gtggcggatg cggcggaaag cgaagaccgt tatgctttaa
    56401 aagataaaat cgaagaaagc atccgtgccg ttgtcgccga cgatgcggat atcgctgtct
    56461 gaaaccggtt gccggaatgt ggcagtatga ttcgcttttg cgga
//
LOCUS       DBBZXU010000003        41577 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.003, whole genome shotgun sequence.
ACCESSION   DBBZXU010000003 DBBZXU010000000
VERSION     DBBZXU010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 41577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 41577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..41577
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.003"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(63..147)
                     /locus_tag="ACJJDE_000139"
     tRNA            complement(63..147)
                     /locus_tag="ACJJDE_000139"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(111..113),aa:Leu,seq:caa)
     gene            424..1077
                     /locus_tag="ACJJDE_000140"
     CDS             424..1077
                     /locus_tag="ACJJDE_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HGG7540148.1"
                     /translation="MFSVPRSFLPGVFVLAALAACKPQDNSAAQAASSSASASAAENA
                     AKPQTRGTDMRKEDIGGDFTLTDGEGKPFSLSDLKGKVVILSFGFTHCPDVCPTELLT
                     YSDTLKQLGGQAKDVKVVFVSIDPERDTPEIIGKYAKQFNPDFIGLTATGDQNLPVIK
                     QQYRVVSAKVNQKDDSENYLVDHSSGAYLIDKNGEVAIFSPYGSEPETIAADVRTLL"
     gene            1156..1809
                     /gene="hisG"
                     /locus_tag="ACJJDE_000141"
     CDS             1156..1809
                     /gene="hisG"
                     /locus_tag="ACJJDE_000141"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HGG7540149.1"
                     /translation="MQDNALTIALSKGRIFEETLPLLAAAGIVPTEEPEKSRKLIIGT
                     NHENIRLVIVRATDVPTYVRYGAADFGIAGKDVLIEHGGTGLYRPLDLEIAKCRMMVA
                     VRKGFDYEAASQPGCRLKIATKYPEIAASHFAGKGVHVDIIKLYGSMELAPLVGLSDA
                     IVDLVSTGNTLKANGLEAVEHIVDISSRLVVNKAALKTKYALLEPIIQAFGGAVKAK"
     gene            1913..2812
                     /locus_tag="ACJJDE_000142"
     CDS             1913..2812
                     /locus_tag="ACJJDE_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HGG7540150.1"
                     /translation="MVAKIKKFSDSTLSVLNNGERRFYVYCLTDLKKDKILYIGKGCG
                     NRIFEHEWVASRSQDPVSGEIIDRKLKAISKCKKLGRYIISYHLTEVEALAAESALIH
                     FVKSVLGKKLKNKIAGHGPGGISVEELDRRFGFSSLPLNEINPDGLILAIKIHNAFDL
                     DTDEELDYLFDNQDDANLKSRTLGNWVIGKDVASKVKYVIGVHTGLQNAVVSAYEVDG
                     FETMVEETKNGRKQSRYRFRTTSRSEEVLAKLGLQQKCLPELKFGSGGEKAYIRPKTE
                     TETEQENIQTTPNPKIKKEKTKS"
     gene            2809..4098
                     /gene="hisD"
                     /locus_tag="ACJJDE_000143"
     CDS             2809..4098
                     /gene="hisD"
                     /locus_tag="ACJJDE_000143"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HGG7540151.1"
                     /translation="MKKLNTQSPDFQAGLKALLAFETAQNPETERIVADICADVQKRG
                     DAALIEYTNKFDQTNAKSIDDLILTQADLNAAFERIPNDVQTALQTAARRVESYHQRQ
                     KMESWSYTDEDGTLLGQQITPLDRVGIYVPGGKAAYPSSVIMNAMPAHVAGVKEIIMV
                     VPTPKGERNDIVLAAAYVAGVTKVFTVGGAQAVAALAYGTETIPQVDKITGPGNAFVA
                     AAKRRVFGVVGIDMVAGPSEILVIADGTTPADWVAMDLFSQAEHDEIAQAILIGTSQA
                     YLDEVEAAMDRLIETMPRRDIIEASLGNRGAMILAKDLDEACEIANYISPEHLELSVE
                     NPQEWAKKIRHAGAIFMGRYTGESLGDYCAGPNHVLPTSRTARFSSPLGTYDFQKRSS
                     LIQVSEQGAQKLGETASVLAHGESLTAHARAAEFRMK"
     gene            4144..5241
                     /gene="hisC"
                     /locus_tag="ACJJDE_000144"
     CDS             4144..5241
                     /gene="hisC"
                     /locus_tag="ACJJDE_000144"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HGG7540152.1"
                     /translation="MKSVRSFIRDDIQAMSAYQIADVPPGFAKLDSMESPVHPFAGHE
                     TLLQEWQARLAAAPIHLYPNPSGSGLQEALRSAFDIPDCADIALGNGSDELIQFITML
                     TAKPGAAMLAAEPSFVMYRHNAALYGMDYVGVPLNGDFTLNLPAVLEAVRKHRPALTF
                     IAYPNNPTGVCFTRAEIEAVIEASDGIVVVDEAYGAFNGDSFLPQAGSIPNLIVMRTV
                     SKIGFAGLRIGYAAGCPEVIGELQKILPPYNMNQLSLTTAKLALQHYGIISANIDSLK
                     NERERMFAELGKICRLNTFPSQANFITIRVPDADLLFDTLKQNRILVKKLHGAHPLLE
                     HCLRITVGSPAQNDAVLNIIRQLYCQPTDFL"
     gene            5238..6155
                     /gene="hisB"
                     /locus_tag="ACJJDE_000145"
     CDS             5238..6155
                     /gene="hisB"
                     /locus_tag="ACJJDE_000145"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HGG7540153.1"
                     /translation="MNLTKTQRQLHNFLTLAQEAGSLSKLAKLCGYRTPVALYKLKQR
                     LEKQAEDPDARGIRPSLMAKLEKHTGKPKGWLDRKHRERTVPETAAESTGTAETQIAE
                     TASAAGCRSVTVNRNTCETQITVSINLDGSGKSRLDTGVPFLEHMIDQIARHGMIDID
                     ISCKGDLHIDDHHTAEDIGITLGQAIRQALGDKKGIRRYGHSYVPLDEALSRVVIDLS
                     GRPGLVYNIEFTRALIGRFDVDLFEEFFHGIVNHSMMTLHIDNLSGKNAHHQAETVFK
                     AFGRALRMAVEHDPRMAGQTPSTKGTLTA"
     gene            6250..7119
                     /locus_tag="ACJJDE_000146"
     CDS             6250..7119
                     /locus_tag="ACJJDE_000146"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HGG7540154.1"
                     /translation="MSANEYTQIGWIGLGQMGLPMVTRLLDGGIEVGVYNRSPDKTAP
                     ISAKGAKVYGNTAELVRDYPVIFLMVSDYAAVCDILNGVRDGLAGKIIVNMSTISPTE
                     NLAVKALVEAAGGQFAEAPVSGSVGPATNGTLLILFGGSEAVLNPLQKIFSLVGKKTF
                     HFGDVGKGSGAKLVLNSLLGIFGEAYSEAMLMARQFGIDTDTIVEAIGGSAMDSPMFQ
                     TKKSLWANREFPPAFALKHASKDLNLAVKELEQAGNTLPAVETVAASYRKAVEAGYGE
                     QDVSGVYLKLAEH"
     gene            7206..8072
                     /locus_tag="ACJJDE_000147"
     CDS             7206..8072
                     /locus_tag="ACJJDE_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter six-transmembrane
                     domain-containing protein"
                     /protein_id="HGG7540155.1"
                     /translation="MWKMLKHIAQTHRKRLIGTFSLVGLENLLMLVYPVFGGRAINAV
                     IAGGVWQALLYALVVLLMWLVGAARRIADTRTFTRIYTEIAVPVVLEQRQRQVPHSAV
                     TARVALSREFVSFFEEHLPIAATSVVSIFGACIMLLVLEFWVGVSAVGILALFLWLLP
                     RFAAISENLYFRLKNSLECDNHFIRKGDRRQLDRHYGLVARLRVLISNREAFGYLCVG
                     AAMGILFGFAFVMMTLKGYSSAGHVYSVGTYLWMFAMSLDDVPRLVEQYSNLKDIGQR
                     IEWSERNIKAGT"
     gene            complement(8123..9175)
                     /gene="sohB"
                     /locus_tag="ACJJDE_000148"
     CDS             complement(8123..9175)
                     /gene="sohB"
                     /locus_tag="ACJJDE_000148"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HGG7540156.1"
                     /translation="MWKEILLNYGIFLLELLTVFGAIALIVLAIVQSKKQSESGSVVL
                     TDFSENYKKQRQSFEAFFLSGEEAKHQEKEEKKKEKAEAKAEKKRLKEGGEKSSETQK
                     SRLFVLDFDGDLYAHAVESLRHEITAVLLIAKPEDEVLLRLESPGGVVHGYGLAASQL
                     RRLRERNIPLTVAVDKVAASGGYMMACVADKIVSAPFAIVGSVGVVAEVPNIHRLLKK
                     HDIDVDVMTAGEFKRTVTFMGENTEKGKQKFRQELEETHQLFKQFVSENRPQLDIEEV
                     ATGEHWFGRQALALNLIDEISTSDDLLLKAFENKQVIEVKYQEKQSLIQRIGLQAEAS
                     VEKLFAKLVNRRADVM"
     gene            complement(9279..9368)
                     /locus_tag="ACJJDE_000149"
     tRNA            complement(9279..9368)
                     /locus_tag="ACJJDE_000149"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9332..9334),aa:Leu,seq:taa)
     gene            complement(9471..9544)
                     /locus_tag="ACJJDE_000150"
     tRNA            complement(9471..9544)
                     /locus_tag="ACJJDE_000150"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9510..9512),aa:Cys,seq:gca)
     gene            complement(9571..9646)
                     /locus_tag="ACJJDE_000151"
     tRNA            complement(9571..9646)
                     /locus_tag="ACJJDE_000151"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9611..9613),aa:Gly,seq:gcc)
     gene            complement(9726..10289)
                     /gene="pgsA"
                     /locus_tag="ACJJDE_000152"
     CDS             complement(9726..10289)
                     /gene="pgsA"
                     /locus_tag="ACJJDE_000152"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HGG7540157.1"
                     /translation="MPWNLPIFLTWLRVLLIPVMTALFYLPFPWFAEETINLTAAVIF
                     AVAALTDWFDGFLARLWKQTSDFGAFLDPVADKLMVAVSLLLLVKLDRTYVLFAMIII
                     GREITISALREWMAQMGKRNSVAVATVGKFKTAAQMLAIFLLLLNIPDFYGFNLVVIG
                     NVLMFIASLLTVWSMLYYLKMAWKEIA"
     gene            complement(10395..10818)
                     /locus_tag="ACJJDE_000153"
                     /pseudo
     CDS             complement(10395..10818)
                     /locus_tag="ACJJDE_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221878.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(10858..10968)
                     /locus_tag="ACJJDE_000154"
                     /pseudo
     CDS             complement(10858..10968)
                     /locus_tag="ACJJDE_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11101..11436)
                     /locus_tag="ACJJDE_000155"
     CDS             complement(11101..11436)
                     /locus_tag="ACJJDE_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7540158.1"
                     /translation="MFKDWKEHTALVKKSFGELGKAHPKMLQAYGALEQAAAAEALDA
                     KTRELIAIAVAITTRCESCISVHAAAAAKAGATDSEIAGALATAIALNAGAAYTYALR
                     ALEAVETQK"
     gene            11565..12470
                     /locus_tag="ACJJDE_000156"
     CDS             11565..12470
                     /locus_tag="ACJJDE_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HGG7540159.1"
                     /translation="MDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVT
                     SGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQC
                     GNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESKKPLTGTVS
                     MVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVDKM
                     VAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
                     THFGKAFKRQYHVSPGQYRKEGGQK"
     gene            complement(12532..13020)
                     /locus_tag="ACJJDE_000157"
     CDS             complement(12532..13020)
                     /locus_tag="ACJJDE_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7540160.1"
                     /translation="MKKYLIPLSIAAVLSGCQSIYVPTLTEIPVNPINTVKTEAPAKG
                     FRLASSHWTDVAKISDEATRLGYQVGIGKMTKVQAAQYLNNFRKRLVGRNAVDDSMYE
                     IYLRSAIDSQRGAINTEQSKLYIQNALRGWQQRWKNMDVKPNNPAFTNFLMEVMKMQP
                     LK"
     gene            13167..14069
                     /locus_tag="ACJJDE_000158"
     CDS             13167..14069
                     /locus_tag="ACJJDE_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7540161.1"
                     /translation="MDTAKKDILGSGWMLVAAVCFTIMNVLIKEASAKFALGSGELVF
                     WRMLFSTVALGAAAVLRRDTFRTPHWKNHLNRSMVGTGAMLLLFYAVTHLPLATGVTL
                     SYTSSIFLAVFSFLILKERISVYTQAVLLLGFAGVVLLLNPSFRSGQETAALAGLAGG
                     AMSGWAYLKVRELSLAGEPGWRVVFYLSVTGVAMSSVWATLTGWHTLSFPSAVYLSCI
                     GVSALIAQLSMTRAYKVGDKFTVASLSYMTVVFSALSAAFFLGEELFWQEILGMCIII
                     LSGILSSIRPTAFKQRLQSLFRQR"
     gene            complement(14110..15240)
                     /locus_tag="ACJJDE_000159"
     CDS             complement(14110..15240)
                     /locus_tag="ACJJDE_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7540162.1"
                     /translation="MTKHLPLAVLTALLLAACGGSDKPPAEKPAPAENQNVLKIYNWS
                     EYVDPETVADFEKKNGIKVTYDVYDSDETLESKVLTGKSGYDIVAPSNAFVGRQIKAG
                     AYQKIDKSLIPNYKHLNPEMMRLMDGVDPGHEYAVPFYWGTNTFAINTERVKKALGTD
                     KLPDNQWDLVFDPEYTSKLKQCGISYLDSAAEIYPMVLNYLGKNPNSSNTEDIREATA
                     LLKKNRPNIKRFTSSGFIDDLARGDTCVTIGFGGDLNIAKRRAEEAGGKEKIRVMMPK
                     EGVGIWVDSFVIPKDAKNVANAHKYINDFLDPEVSAKNGNFVTYAPSSKPARELMEDE
                     FKNDNTIFPTEEDLKNSFIMVPIQPAALKFMVRQWQDVKAGK"
     gene            15445..18414
                     /gene="alaS"
                     /locus_tag="ACJJDE_000160"
                     /pseudo
     CDS             15445..18414
                     /gene="alaS"
                     /locus_tag="ACJJDE_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343549.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
     gene            complement(18502..19524)
                     /locus_tag="ACJJDE_000161"
     CDS             complement(18502..19524)
                     /locus_tag="ACJJDE_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7540163.1"
                     /translation="MLTKKEFEKFLDEVCTVLRQEAKNAPFKSQDIFENRVRALCIAK
                     IPAYADIVINPEPVPQIFPDVPIGEYGVEVKFTLKDTWRSVANSIQEKNKADGVQHIY
                     VIFGKMGGIPDVKWQLYEDSVIHVRTSHVPRFEVEIESDRPSLFEGFGISYAEFADLD
                     MHEKMEYIRKYARNRLKEGERLWWIEDIDAVDSHDLPLEVRLYTSLPQEEKIRLRAEA
                     ALVSPRIVCSGRAKHKYDNAVLYLITYRGVLCHQARDLFSAGSVANSAEDYRGGNYVE
                     KSLKLIEHEIEKAALEMDDALIVEYWGESVPTEKRLEYWIKMLDDLADGWIPSESLFN
                     GRYKAK"
     gene            complement(19578..20729)
                     /locus_tag="ACJJDE_000162"
     CDS             complement(19578..20729)
                     /locus_tag="ACJJDE_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7540164.1"
                     /translation="MTEFARKNWNKLAGDAIKAKMHEHGIGFIQLSELFLEQGESETA
                     NAICNKVNRGTFSHAFYLKCMELMTKQEKQEDREKKYKIISLFSGCGGMDLGFLGGFE
                     FLNRTYDKHDFDIIWANEIDEHAVRTYRHNLGNHIVHGDIWQHLDEIPTSADIIIGGF
                     PCQDISINGKGAGISGSRSGLYKAMLSAVERVRPKIFVAENVKGLLMKHHRKDLETVL
                     SDFRNLGYQVDYYLLNAADYGVPQTRERVIIVGRLPEIPEIQIEKTNTSNSYVTARQA
                     IGDLVDKVEDEIANHIWSRAEKSPDQGSRKLDAERAGYTIRAECHGNIQWHYELPRRI
                     SMREAARIQSFPDNFIFQAKLRATERQIGNAVPPVLGWHIAAAVSKALK"
     gene            21352..21582
                     /locus_tag="ACJJDE_000163"
     CDS             21352..21582
                     /locus_tag="ACJJDE_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540165.1"
                     /translation="MFKTLKSIWQGLTQKGKIFPYQLAFTLLIPLRNWALSPQQITQR
                     LHFVPHHRICCGAGYFSCVGCASAHRFLIFAC"
     gene            21823..22767
                     /gene="tehA"
                     /locus_tag="ACJJDE_000164"
     CDS             21823..22767
                     /gene="tehA"
                     /locus_tag="ACJJDE_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HGG7540166.1"
                     /translation="MSASKKFPIPLSYFSIALGLFALGLSWRYGASVGLLPALAAESL
                     LAVASVVWLLLVAAYLIKMFAYRNDFLSDLRDLVQCCFISAIPITAMLEGLALKPYQA
                     GAAAVLIYVGVAGQLAFSMYRAAGLWRGLHSLEATTPIIYLPTVATNFVSASSLAALG
                     HHDYAALFFGAGMFSWLSLEASILGRLRTAAPVGTAARGVVGIQLAPAFVGCGAYFAV
                     GGKVDGFALALIGYGCLQLLFLLRLTRWFWEGGFTMSFWGFSFGFAAMAGCGLHLAAS
                     GILSGLGLTLATAGSAGVALLLVGTLHRIATGRFLVRG"
     gene            complement(22841..23524)
                     /locus_tag="ACJJDE_000165"
     CDS             complement(22841..23524)
                     /locus_tag="ACJJDE_000165"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HGG7540167.1"
                     /translation="MELVFIRHGQSEWNAKNLFTGWRDVKLSEQGLAEAAAAGKKLKE
                     NGYEFDIAFTSVLTRAIKTCNIVLEESDQLFVPQIKTWRLNERHYGQLQGLDKKQTAE
                     QYGDEQVRIWRRSYDTLPPLLDKDDAFSAHKDRRYAHLPADVIPDGENLKVTLDRVLP
                     FWEDQIAPAILSGKRVLVAAHGNSLRALAKHIEGISDEDIMGLEIPTGQPLVYKLDDN
                     LKVLEKFYL"
     gene            23822..26125
                     /gene="parC"
                     /locus_tag="ACJJDE_000166"
     CDS             23822..26125
                     /gene="parC"
                     /locus_tag="ACJJDE_000166"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HGG7540168.1"
                     /translation="MNMQPHAPHTDSNTLMLGRYAERAYLEYAMSVVKGRALPEVSDG
                     QKPVQRRILFAMRDMGLTAGAKPVKSARVVGEILGKYHPHGDSSAYEAMVRMAQDFTL
                     RYPLIDGIGNFGSRDGDGAAAMRYTEARLTPIAELLLSEINQGTVDFVPNYDGAFDEP
                     LHLPARLPMVLLNGASGIAVGMATEIPSHNLNEVTQAAIALLKKPTLETADLMQYIPA
                     PDFAGGGQIITPADELRRIYETGKGSVRVRARYEIEKLARGQWRVIVTELPPNANSAK
                     ILAEIEEQTNPKPKAGKKQLNQDQLNTKKLMLDLIDRVRDESDGEHPVRLVFEPKSSR
                     IDTDTFINTLMAQTSLEGNVSMNLVMMGLDNRPAQKNLKTILQEWLDFRTVTVTRRLK
                     FRLNQVEKRLHILEGRLKVFLHIDEVIKVIRESDDPKADLMAAFGLTEIQAEDILEIR
                     LRQLARLEGFKLEKELNELREEQGRLNILLGDENEKRKLIIKEMQADMKQYGDARRTL
                     VEEAGRAVLTQTTADEPITLILSEKGWIRSRAGHNLDLSQTAFKEGDRLKQTLEGRTV
                     LPVVILDSLGRTYTLDAAEIPGGRGDGVPVSSLIELQNSAKPVAMLTGLPEQHYLLSS
                     SGGYGFIAKLADMVGRVKAGKVVMTTDSGETVLPPIAVYASSFINPDCKIIAATSQNR
                     ALAFPIGELKIMAKGKGLQIIGLNAGESLTHTAVSSEPEILIESEGRRGAAHKDRIPV
                     SLLEAKRGKKGKLLPISGSLKQLSSPK"
     gene            26146..27737
                     /locus_tag="ACJJDE_000167"
                     /pseudo
     CDS             26146..27737
                     /locus_tag="ACJJDE_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237220.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
     gene            27730..28197
                     /locus_tag="ACJJDE_000168"
     CDS             27730..28197
                     /locus_tag="ACJJDE_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004518841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7540169.1"
                     /translation="MTELQHPVLVVDDETDILDLMEMTLMKMGLRVHTASGVAEAKNK
                     LDSQRYSLVLTDMRMPDGSGLEVVQHINSRLLDTPVAVITAFGNADQAQEALRCGAFD
                     PDTMQIQDYLDQIERDIIEQTLKQTEGNRTQADKRLGISFRSMRYRMERLNIG"
     gene            28301..29053
                     /locus_tag="ACJJDE_000169"
     CDS             28301..29053
                     /locus_tag="ACJJDE_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7540170.1"
                     /translation="MTDILIDNTATETVRTLIRAFPLVPVSQPPEQGSYLLTEHDTVS
                     LRLVGEKSSVIVDFASGAAQYRRTKGGGELIAKAVNHTAKPTVWDATAGLGRDSFVLA
                     SLGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVQTQG
                     KPDIVYLDPMYPERRKSAAVKKEMAYFHRLVGEAQDEAVLLHTARQTAKKRVVVKRPR
                     LGEHLAGQAPAYQYTGKSTRFDVYLPYEADKG"
     gene            complement(29438..29644)
                     /locus_tag="ACJJDE_000170"
     CDS             complement(29438..29644)
                     /locus_tag="ACJJDE_000170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2788 domain-containing protein"
                     /protein_id="HGG7540171.1"
                     /translation="MDEAVFADWALKICLTGLIIFLGFIVWNLGKESKAGKFGIAILF
                     LVLGLGVFGFVFKELLIKFLVLPK"
     gene            complement(29731..30900)
                     /gene="metZ"
                     /locus_tag="ACJJDE_000171"
     CDS             complement(29731..30900)
                     /gene="metZ"
                     /locus_tag="ACJJDE_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HGG7540172.1"
                     /translation="MSKKLHPQTLAIRGGKEQTEYREHNQALFLTSSFMWDNAQHAAD
                     LFSKKIKGFTYTRTANPTTAAFEKRIAALEGAERAVATSTGMSAIQAAFFTFLQAGDH
                     VVSSRSLFGTTVGFINNIVTKFGIEVSHVSPTDINEWKAAVKANTKLLFLETPSNPLG
                     EVADLEALAELAHGIGAILVVDNSLLSPVGSQPLKHGADISVSSATKAIDGHGRVMGG
                     VLAGSEELMAQAAVYCNSCGLAMSPFNAWQLLSGVETLSLRMEKQFDNALKIAQWLQA
                     QPQVQAVYYTGLPDHPQAALIRKQQNGGGIVIGFEVADQAAAWKVVDGVELFSRTANL
                     GDVRSTITHPWTTTHGRMQPEEKLAANIRPGLVRLSVGLEYVGDLIDDLKQALAR"
     gene            complement(31045..31806)
                     /locus_tag="ACJJDE_000172"
     CDS             complement(31045..31806)
                     /locus_tag="ACJJDE_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540173.1"
                     /translation="MDANKEPNWEKRLENLRQTRRMKAVPTYAPLSRPSETGTDAPVP
                     KLDDESRARVLKAYLKKWQEEHNAAVADCGEEVETDPMIVLQENWLNAQASLQMSVSE
                     KHIESRRRIRFDAQKDSAEFETGQIEGRENADAAESGTAADGVAENGEGGAEEALMPV
                     QINILNPKAVNRREVFCLSEQELTERLIKRLRPHLTDTVNGIIRTAVQKQMAVFTYQL
                     QQMLHEQAGAVVEDVLEHDVRKILNDIKYELKYKR"
     gene            31906..32157
                     /locus_tag="ACJJDE_000173"
     CDS             31906..32157
                     /locus_tag="ACJJDE_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540174.1"
                     /translation="MGSIEQRLEYLEEANDVLRMQNHVLSTAFKALIRALPAETAEIA
                     VESIQLAFEDALAELSYEDSPHTDLFHDVTYAFFREKER"
     gene            32209..33015
                     /locus_tag="ACJJDE_000174"
     CDS             32209..33015
                     /locus_tag="ACJJDE_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="basic amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7540175.1"
                     /translation="MNMKKWIAAALACSALALSACGGQGKDAAAPAANPDKVYRVASN
                     AEFAPFESLDSKGNVEGFDVDLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADVVMS
                     GVTITDDRKQSMDFSDPYFEITQVVLVPKGKKISSSDDLKNMNKVGVVTGYTGDFSVS
                     KLLGNDNPKIARFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPTKGMDFVTLPDF
                     TTEHYGIAVRKGDEATVKMLNDALEKVRESGEYDKIYAKYFAKEDEQAAK"
     gene            33322..34845
                     /locus_tag="ACJJDE_000175"
     CDS             33322..34845
                     /locus_tag="ACJJDE_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HGG7540176.1"
                     /translation="MTVIKQEDFIQSICDAFQFISYYHPKDYIDALYKAWQKEENPAA
                     KDAMTQILVNSRMCAENNRPICQDTGIATVFLKVGMDVQWDADMSVEEMVNEGVRRAY
                     TWEGNTLRASVLADPAGKRQNTKDNTPAVIHMSIVPGDKVEVTCAAKGGGSENKSKLA
                     MLNPSDNIVDWVLKTIPTMGAGWCPPGILGIGIGGTPEKAVLMAKESLMSHIDIQELQ
                     EKAASGAELSTTEALRLELFEKVNALGIGAQGLGGLTTVLDVKILDYPTHAASKPIAM
                     IPNCAATRHVEFELDGSGPVELTPPRVEDWPDLTYSPDNGKRVDVDKLTKEEVASWKT
                     GDVLLLNGKILTGRDAAHKRLVDMLNKGEELPVDFTNRLIYYVGPVDPVGDEVVGPAG
                     PTTATRMDKFTRQMLEQTGLLGMIGKSERGAAACEAIADNKAVYLMAVGGAAYLVAKA
                     IKSSKVLAFPELGMEAIYEFEVKDMPVTVAVDSKGESIHATAPPQWQAKIGIIPVKS"
     gene            34943..36355
                     /gene="trkA"
                     /locus_tag="ACJJDE_000176"
     CDS             34943..36355
                     /gene="trkA"
                     /locus_tag="ACJJDE_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HGG7540177.1"
                     /translation="MKILILGNGQVGSTVAQNLAAIPNNDVTVIDIDEKALQETGSRL
                     DVQTVFGNGASPFTLERAGAEDADLLLALSRSDETNIVACKVAADLFNIPGRIARVRS
                     SEYLEYLSPKLENNENGSLSIFGITETISPEQLVTEQLAGLIDCPGALQVLRFADDRV
                     RMVIIQARRGGLLVGRSIADIAQDLPDGADCQICAVYRNNRLIVPAPQTVIIEGDEIL
                     FAAAAENIGAVIPELRPKETSTRRIMIAGGGNIGYRLAKQLEHAYNVKIIECRPRRAE
                     WIAENLDNTLVLQGSATDETLLDNEYIDEIDVFCALTNDDESNIMSALLAKNLGAKRV
                     IGIVNRSSYVDLLEGNKIDIVVSPHLITIGSILAHIRRGDIVAVHPIRRGTAEAIEVV
                     AHGDKKTSAIIGRRISGIKWPEGCHIAAVVRAETGETIMGHHTETVIQDGDHIIFFVS
                     RRRILNELEKLIQVKMGFFG"
     gene            37124..37199
                     /locus_tag="ACJJDE_000177"
     tRNA            37124..37199
                     /locus_tag="ACJJDE_000177"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:37158..37160,aa:Glu,seq:ttc)
     gene            38133..38939
                     /gene="thiD"
                     /locus_tag="ACJJDE_000178"
     CDS             38133..38939
                     /gene="thiD"
                     /locus_tag="ACJJDE_000178"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HGG7540178.1"
                     /translation="MKSSFVQTLTIAGSDSGGGAGIQADLKTFQMRGVFGTCVITAVT
                     AQNTLGVSAVHLVPTETITAQIQAIREDFDIRAYKIGMLGTAEIIECVADKLKHCDFG
                     RRVLDPVMIAKGGAPLLQDSAVAALTRLLLPDTDVLTPNLPEAEALTGVHIENRKDAE
                     RAAKILLDYGVKNVVIKGGHLNGSSSGRCTDWLFTQNETLELDSPRFPTAHTHGTGCT
                     FSACITAELAKGSDVCEAVQTAKAYITAAISNPLEIGAGHGPVNHWAYRD"
     gene            complement(38989..39858)
                     /gene="tehB"
                     /locus_tag="ACJJDE_000179"
     CDS             complement(38989..39858)
                     /gene="tehB"
                     /locus_tag="ACJJDE_000179"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0046690 - response to tellurium ion
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase TehB"
                     /protein_id="HGG7540179.1"
                     /translation="MKEWIVGQSGELFCFGQMPVWKAENLPEVLLSGYSSEGGEWVCL
                     NVLQGDVEVRTQDGAAEVWSAESGDCVFAPQQVFSVKPKTDDAEIRLSMYCVAEDYFH
                     KKYGMSATHSAVAAAQDIVPAGRALDMGCGQGRNALFLGLKGFEVTAVDHNPAALANV
                     AELAEAEGLNVRTLEYDLNAAALQGEFDYIVATVVLMFLMPQRVPDVIADMQAHTAAG
                     GYNLIVSAMDTADFPCPMPFPFKFKEGELKDYYRDWELVEYKEELGAMHAKDENGNPI
                     RFKFVTMLAKRPE"
     gene            39972..40409
                     /gene="rnhA"
                     /locus_tag="ACJJDE_000180"
     CDS             39972..40409
                     /gene="rnhA"
                     /locus_tag="ACJJDE_000180"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HGG7540180.1"
                     /translation="MDKTVYLYTDGACKGNPGAGGWGVLMRYGSREKELFGGEAQTTN
                     NRMELTAVIEGLKSLKRRCTVIICTDSQYVKNGMENWIHGWKRNGWKTAAKQPVKNDD
                     LWKELDVLVGQHQVSWTWVKGHAGHAENERADDLANRGAAQFS"
BASE COUNT        10302 a        11677 c        10141 g         9457 t
ORIGIN      
        1 ttagttttat ctatttcatt aaacagcaat agacaaaaaa ataaccgctc taaaagcggt
       61 tgtggtgccc agggtcggac tcgaaccgac acaccttgcg gcgggggatt ttgagtcccc
      121 tgcgtctacc aatttcgcca cctgggctgg tgaagaagtc gtcattataa tggcttttga
      181 aattctgtaa accttttttt tgaaattatt ttatctgttt ttattttatt tttgatttta
      241 aatagaattt ttattatttt aatcttactg ttctttccgc tccaaagatt ctgtatgatt
      301 cggcaattcc tgccgtgcaa acaacgtaaa aaaatactac attaaatctg ccaaacgcgt
      361 taagatggaa atattcaaat tccgtacgaa tcaggttttg ctatttattc ttgggagatt
      421 gtcatgtttt ccgtaccgcg ttcctttttg ccgggcgttt tcgtacttgc cgcgcttgcc
      481 gcctgcaaac ctcaagacaa cagtgcggcg caagccgctt cttcaagtgc atccgcgtca
      541 gctgcggaaa atgcggcaaa gccgcaaacg cgcggtacgg atatgcgtaa ggaagacatc
      601 ggcggcgatt tcacgctgac cgacggcgaa ggcaagcctt tcagcctgag cgatttgaaa
      661 ggcaaggtcg tgattctgtc tttcggcttt acgcactgtc ccgatgtctg cccgacagag
      721 cttttgacgt acagcgacac gttgaagcag ttgggcgggc aggctaagga cgtgaaagtg
      781 gtgttcgtca gcatcgatcc ggaacgcgac acgcctgaaa tcatcggcaa gtatgccaaa
      841 cagttcaatc cggactttat cggtctgacg gcaacgggcg accaaaacct gccggtcatc
      901 aagcagcaat accgcgtggt ttctgccaaa gtcaatcaaa aagacgacag cgaaaactat
      961 ttggtcgacc actcttccgg tgcgtatctc atcgacaaaa acggtgaggt tgccattttc
     1021 tcgccttacg gaagcgagcc ggaaacgatt gctgccgatg taaggactct gctctgataa
     1081 aaccgtatgc cgtctgcacc gtcggcgcct attcagacgg cattattgtt tcaaccgaca
     1141 aaggacatcc acaccatgca ggataatgct ttgaccatcg ccttatccaa ggggcgcatt
     1201 tttgaggaga cgctgccgct gcttgccgct gccggcattg ttccgactga agagcctgaa
     1261 aaatcgcgca agctgattat cgggacgaac catgaaaaca tccgccttgt cattgtccgc
     1321 gcaaccgatg tgccgactta tgtccgctac ggcgcggcgg acttcggcat tgcgggcaaa
     1381 gacgtgctga tcgaacacgg cggcacgggg ctttaccggc ctttggattt ggagattgcc
     1441 aagtgccgca tgatggttgc tgtgcgtaaa gggtttgatt acgaagcagc ttcgcaaccc
     1501 ggatgccgtc tgaagattgc cacgaagtat cctgaaatcg cggcatctca ttttgccggc
     1561 aagggtgtcc atgtggacat tatcaaactg tacggctcga tggaacttgc gccgctggtc
     1621 ggcttgagcg atgcgattgt ggacttggtt tcgacgggca acaccttgaa ggcaaacggc
     1681 ttggaagcag tcgaacacat cgtcgacatt tccagccgcc tggtggtcaa caaggctgct
     1741 ttgaaaacga aatacgcgct gctggagccg attattcagg cgttcggcgg cgcagtgaag
     1801 gcgaagtaag catccatttg aataaagatg cgttttcaga cgaccctatc cgttcccgcc
     1861 gacaggtcgt ctgaaaatat caccggcagt aaactgtata ggagaagtta aaatggttgc
     1921 aaaaataaaa aaattctcag attcaaccct ttccgttttg aataacggcg agcgtcggtt
     1981 ttatgtctat tgtctgaccg acctgaaaaa agacaaaatc ctctacatcg gcaaaggctg
     2041 cggtaatcgt atcttcgagc atgaatgggt tgctagtcgt tcacaagacc cagtctccgg
     2101 cgagattatc gatcggaaac tcaaagccat ctccaaatgc aagaaactcg gtcgctatat
     2161 catcagctat catctgactg aagtcgaagc actcgccgcc gaatctgcct taattcattt
     2221 tgttaaatct gtcttgggta aaaaactcaa aaataaaatt gccgggcatg gtccgggtgg
     2281 tattagcgta gaagaactag atcgccgctt tggattctct tctctcccac ttaacgagat
     2341 taaccccgac gggctgattc tcgccatcaa aatccacaat gctttcgatt tagatactga
     2401 cgaagaatta gactaccttt tcgacaacca agacgatgcc aacctcaaat cgcgtacgtt
     2461 gggcaactgg gttatcggta aagatgttgc ttcaaaagtg aaatacgtta tcggcgttca
     2521 caccggtctg caaaacgctg ttgtcagtgc atacgaagtg gacggttttg aaacaatggt
     2581 tgaggaaacc aaaaacggta gaaaacaatc ccgttaccgt ttccgcacta cctctcgtag
     2641 cgaagaggta ttagccaaac tcggtctgca acaaaaatgc ctgcccgaat tgaagtttgg
     2701 tagcggggga gaaaaagcgt atatcagacc caaaacagag acagaaactg aacaagagaa
     2761 tattcagacg acccccaatc caaaaataaa aaaggaaaaa accaaatcat gaaaaaactc
     2821 aacacccaat cgcccgattt ccaagccgga ctcaaagccc tgctggcttt tgaaaccgcg
     2881 caaaaccccg aaaccgaacg catcgtcgcc gacatttgcg ccgacgtgca aaagcgcggc
     2941 gatgcggctt tgattgaata caccaacaaa ttcgatcaga caaacgctaa aagcatcgat
     3001 gatttaatac tcacgcaagc cgatttgaac gcggcgttcg agcgcattcc gaacgacgtt
     3061 cagacggcat tgcagaccgc cgcccgccgt gtcgaaagct accaccaacg ccaaaaaatg
     3121 gaatcgtgga gctacaccga tgaagacggc acgctgttgg gacaacagat taccccgctt
     3181 gaccgcgtcg gcatttacgt ccccggcggc aaggcggcat atccgagttc cgtcatcatg
     3241 aacgccatgc ccgcccacgt cgcaggcgtg aaagaaatca tcatggtcgt gccgacaccg
     3301 aaaggcgaac gcaacgacat cgtgcttgcc gccgcatacg tcgccggcgt aaccaaagtc
     3361 ttcaccgtcg gcggcgcgca ggcggttgcc gccctcgcct acggcacgga aaccatcccc
     3421 caagtcgata aaatcaccgg tccgggcaac gccttcgtcg ccgccgccaa acgccgcgtg
     3481 ttcggcgtgg tcggcatcga catggtggcg gggccgtctg aaatcctggt catcgccgac
     3541 ggcacgacac ctgccgattg ggtggcgatg gatttgttca gccaggccga acacgacgaa
     3601 attgcccaag ccatcctcat cggcacgtcg caagcgtatc tcgacgaagt agaagccgct
     3661 atggaccgcc tgatcgaaac tatgccgcgc cgcgacatca tcgaagcctc gctcggcaac
     3721 aggggcgcga tgatactcgc caaagacttg gacgaagcct gcgaaatcgc caactacatt
     3781 tcccccgaac acttggaact gtcagtcgaa aatccgcagg aatgggcgaa aaaaatccgc
     3841 cacgccggtg cgattttcat gggacgctac accggcgaaa gcctcggcga ctactgcgcc
     3901 ggtccaaacc atgtattgcc caccagccga accgcccgct tttcctcgcc tttggggaca
     3961 tatgatttcc aaaaacgctc cagcctgatt caggtttcgg aacagggcgc gcaaaaatta
     4021 ggcgaaaccg ccagcgtgct ggcacacggc gaaagcctga ccgcccacgc ccgcgcggca
     4081 gagttccgta tgaaataatg ccgaaacggc gtacaggcat attccaacca ttaaggaaac
     4141 acgatgaaat ccgtccgctc cttcatccgc gacgacatac aagctatgtc ggcatatcag
     4201 attgccgacg ttccgcccgg ctttgccaaa ctcgattcga tggaaagtcc cgtccaccct
     4261 tttgccggac atgaaacgct gttgcaggaa tggcaggcac ggcttgccgc cgcgcccatc
     4321 catctttacc ccaatccctc cggcagcggt ttacaggaag cattacgttc ggcgttcgac
     4381 attcccgact gcgccgacat cgcgctgggc aacggctcgg acgagctgat acagttcatc
     4441 acgatgctga ccgccaaacc gggcgcggca atgttggcag ccgaacccag tttcgtcatg
     4501 taccgccaca acgccgcgct gtacggcatg gattatgtcg gcgttccact gaacggagat
     4561 ttcaccctca acctgcccgc cgtcctcgaa gccgtcagga agcaccgccc tgccctgacc
     4621 tttatcgcct accccaacaa ccccaccggc gtatgtttca cgcgtgccga aatcgaagcc
     4681 gtcatcgaag cttcagacgg catcgtcgtc gtcgacgaag cctacggcgc attcaacggc
     4741 gacagcttcc tgccgcaggc gggcagcatt cccaacctca tcgtcatgcg taccgtcagc
     4801 aaaatcggtt ttgccggact gcgtatcggc tatgcggcag gctgtcccga agtcatcggc
     4861 gaactgcaaa aaatcctgcc gccctacaat atgaaccaac tgagcctgac caccgccaaa
     4921 ctcgccctgc aacactacgg catcatctct gccaacatcg acagcctgaa aaacgaacgc
     4981 gaacggatgt tcgccgaatt gggcaaaata tgccgtctga acacctttcc aagtcaggca
     5041 aacttcatta ccatacgcgt acccgatgcc gatttgttgt ttgacacgct caaacaaaac
     5101 cgcatcttgg ttaaaaaact gcatggcgcg cacccgcttt tggaacactg cctgcgcatt
     5161 accgtaggca gccccgcaca aaacgatgcc gttctcaaca tcattcgcca actttactgc
     5221 caaccaacgg atttcctatg aatttgacta aaacacaacg ccaactgcac aactttctga
     5281 ccctcgccca agaagcaggt tcgctgtcca agctcgccaa actctgcggc taccgtaccc
     5341 ccgtcgcact ctacaaactc aaacaacgcc ttgaaaagca ggcagaagac ccagatgcac
     5401 gcggcatccg tcccagcctg atggcaaaac tcgaaaaaca caccggcaaa cccaaaggct
     5461 ggctcgacag aaaacaccgc gaacgcactg tccccgaaac cgccgcagaa agcaccggaa
     5521 ctgccgaaac ccaaattgcc gaaaccgcat ctgctgccgg ctgccgcagc gttaccgtca
     5581 accgcaatac ctgcgaaacc caaatcaccg tctccatcaa cctcgacggc agcggcaaaa
     5641 gcaggctgga taccggcgta cccttcctcg aacacatgat cgatcaaatc gcccgccacg
     5701 gcatgattga catcgacatc agctgcaaag gcgacctgca catcgacgac caccacaccg
     5761 ccgaagacat cggcatcaca ctcggacaag caatccggca ggcactcggc gacaaaaaag
     5821 gcatccgccg ttacggacat tcctacgtcc cgctcgacga agccctcagc cgcgtcgtca
     5881 tcgacctttc cggccgcccc ggactcgtgt acaacatcga atttacccgc gcactaatcg
     5941 gacgtttcga tgtcgatttg tttgaagaat ttttccacgg catcgtcaac cacagtatga
     6001 tgaccctgca catcgacaac ctcagcggca aaaacgccca ccatcaggcg gaaaccgtat
     6061 tcaaagcctt cgggcgcgcc ctgcgtatgg cagtcgaaca cgacccgcgc atggcaggac
     6121 agaccccctc gaccaaaggc acgctgaccg cataaaaaac cataccgtct gaaacacccg
     6181 caggcttttc agacggtatc ggaacagata agattacact acactacaaa cagaaaagga
     6241 gtaaacatca tgtccgcaaa cgaatacaca caaatcggct ggataggctt agggcaaatg
     6301 ggtctgccta tggtaacgcg gctcttggac ggcggcatcg aagtcggcgt atacaaccgc
     6361 tcgcccgaca aaactgcccc catctccgcc aaaggcgcaa aagtttacgg caacaccgcc
     6421 gaactcgtcc gcgactatcc cgtcattttc ctgatggttt ccgactatgc cgccgtgtgc
     6481 gacatcctga acggagtccg cgacggattg gccggcaaaa tcatcgtcaa catgagcacc
     6541 atctccccga ccgaaaacct cgccgtcaaa gcacttgtcg aagccgcagg cggacagttt
     6601 gccgaagcac ccgtttccgg atcggtcggg cccgccacca acggcacgct gctgattctg
     6661 ttcggcggca gcgaagccgt tttaaacccg ctgcaaaaaa tattttccct cgtcggcaaa
     6721 aaaaccttcc atttcggcga tgtcggcaaa ggttcgggcg cgaaactcgt cttgaactcg
     6781 ctcttgggca ttttcggcga agcgtacagc gaagcgatgc tgatggcgcg gcagttcggc
     6841 atcgataccg acaccatcgt cgaagccatc ggcggctcgg caatggactc gcccatgttc
     6901 caaaccaaaa aatccctgtg ggcaaaccgc gaattcccac ccgccttcgc cctcaaacac
     6961 gcctccaaag acctcaacct cgccgtcaaa gagcttgaac aggcaggcaa caccctgccc
     7021 gccgtcgaaa ccgttgctgc cagctaccgc aaagcagtcg aagccggcta cggcgaacag
     7081 gacgtttccg gcgtttacct gaaattggca gaacactgat tgccttttcc aaacacaatg
     7141 ccgtctgaac atatttcaga cggcattttt atcaccccac gctaaataaa aaatagggaa
     7201 caaatatgtg gaaaatgttg aaacacatag cccaaaccca ccgcaagcga ttgattggca
     7261 cattttccct ggtcggactg gaaaaccttt tgatgctggt gtatccggtg tttggcggcc
     7321 gggcgatcaa tgccgtgatt gcgggggggg tgtggcaggc gttgctgtac gctttggttg
     7381 tgcttttgat gtggctggtc ggtgcggcgc ggcggattgc cgatacgcgc acgtttacgc
     7441 ggatttatac cgaaatcgcc gtgccggtcg tgttggaaca gcggcagcga caagtcccgc
     7501 attcggcggt aactgcgcgg gttgccctgt cgcgtgagtt tgtcagcttt tttgaagaac
     7561 acctgccgat tgccgcgaca tccgtcgtat ccatattcgg cgcgtgcatc atgctgctgg
     7621 tgctggaatt ttgggtcggc gtgtcggcgg tgggcatact tgcgttgttt ttatggcttt
     7681 tgccacgttt tgccgccatc agcgaaaacc tgtatttccg cctgaagaac agcttggaat
     7741 gcgacaacca ctttatccga aaaggagacc ggcggcagct ggaccgccat tacggactgg
     7801 ttgcgcgcct gcgtgtgctg atttccaacc gcgaagcctt cggctatctc tgcgtcggcg
     7861 cggcgatggg tattttgttc ggctttgctt ttgtgatgat gacgctcaaa ggctacagca
     7921 gcgcggggca tgtctattcg gtcggcactt atctgtggat gtttgccatg agtttggacg
     7981 acgtgccgcg attggtcgaa caatattcca atttgaaaga catcggacaa cggatagagt
     8041 ggtcggaacg gaacatcaaa gccggaactt gaaaaatgcc gtctgaacac gcttcagacg
     8101 gcatttccat ccgttcggca aactacatca catccgcccg ccggttgaca agtttggcaa
     8161 acaacttttc aacagaagct tccgcctgca aaccaatgcg ctggatcagg ctttgcttct
     8221 cctgatattt cacttcgata acctgtttgt tttcaaacgc tttcaacaac aaatcatcac
     8281 tggtcgaaat ctcgtcaatc aagttcaacg ccaacgcctg ccgaccgaac caatgctcgc
     8341 ccgttgccac ttcctcaata tccaattgag ggcggttctc gctgacaaac tgcttgaaca
     8401 actgatgcgt ttcctccagt tcctgtcgga atttctgttt gcccttttcc gtattttcac
     8461 ccataaaagt aaccgtgcgc ttaaattcgc ccgccgtcat cacatccaca tcaatatcat
     8521 gttttttcaa caggcggtgg atattcggta cttccgccac cacacccacc gaaccgacaa
     8581 tcgcaaacgg agcggaaaca attttatccg ccacacacgc catcatataa ccaccgctcg
     8641 ctgccacctt atcgacggcg acggtcagcg gaatattgcg ttcgcgcaaa cgcctaagct
     8701 gtgaagccgc caaaccgtaa ccgtgaacca cgccgcccgg actttccaat ctaagcagaa
     8761 cctcatcttc aggcttggca atcaaaagca ccgccgtaat ctcatgacgc aaggattcta
     8821 cggcgtgtgc atacaaatcg ccgtcaaaat ccaacacaaa aaggcgggat ttttgcgttt
     8881 cggaagattt ctccccaccc tccttcaaac gctttttctc tgctttggct tccgcctttt
     8941 cctttttctt ttcctctttt tcctgatgtt ttgcctcttc cccgcttaaa aagaatgctt
     9001 caaacgattg ccgctgtttt ttataatttt ccgaaaaatc cgtcagtacg acactgccgc
     9061 tttccgactg tttcttactc tgtacgatag ccaacacaat cagcgcaatt gcgccgaaca
     9121 cggtaagcag ttcgagcagg aaaataccgt aattcagtaa aatttctttc cacattgatt
     9181 ggatttcctc ttgttcaggc atgaacatgt caatattgtc catcaccgtc cgacagataa
     9241 aaaaataacc gcttggagcg gcattgtcat tttcagcttg gtgcccggag ccggaatcga
     9301 accggcacgg gatgtttagt cccgacggat tttaagtccg ttgtgtctac ctatttcacc
     9361 acccgggcat ttgtgaaagg tggaggcggg ggcgcggatt ttaaccggcc tatatgaaga
     9421 ttgcactcct catagcataa acactctgcc accccgccat agtacgataa tggaggcgag
     9481 agtcggaatc gaaccggcgt agacggattt gcaatccgct gcataaccac tttgctatct
     9541 cgccctaaaa ctggcttatc taaaaaaact tggagcggga aacgagtctc gaactcgcga
     9601 cctcaacctt ggcaaggttg cgctctacca actgagctat tcccgcccga tttcattctc
     9661 caacatcgaa gagacgcaat tattatggat tctgtttttg ccgtcaagct atttttatgt
     9721 ttttttcagg cgatttcttt ccacgccatt ttcagataat acagcatcga ccagactgtc
     9781 agcaaagatg cgataaacat caatacattg ccgataacaa caagattaaa tccgtaaaaa
     9841 tcgggaatat tcagcagcag caggaaaatt gccagcattt gcgcggcggt tttaaactta
     9901 ccgacggtgg cgacggcaac gctgttcctt ttgcccattt gcgccatcca ttcgcgcaat
     9961 gcggaaatgg taatttccct gccgataatg atcatggcaa acaaaacata ggtccggtcg
    10021 agtttgacca gtaaaagtag cgatacggca accatcagct tgtcggcgac gggatcgagg
    10081 aaggcgccga aatcggaagt ctgtttccac agtcttgcca aaaatccgtc aaaccagtcg
    10141 gttaaggcgg caacggcaaa aatgacggcg gcggtgagat taatcgtttc ctccgcgaac
    10201 cacggaaaag gcaggtaaaa aagggctgtc atgacaggaa tgagcaagac cctcaaccat
    10261 gtgaggaaga tggggagatt ccaaggcatc ggttttctct gtgcagactg taaagttgtg
    10321 attataacgg ttatcctcat aacccaaaac gtaaaattgc tgcatgggca ttcccccgcc
    10381 ccgccaatct gttttcacat tcttttcaaa cgcaggaaaa tggcgggcaa taaaagcaaa
    10441 atacccagtt tcaggctgaa aacggcaggt tgtgccaaca cttcgacaag gcggtcttcc
    10501 gtgcgggcaa aatctttatt gcttatagac actgccactg ttgcggtatt ccaacagaac
    10561 gccgtttaaa aaacctttgc cgacggtttc gcttaaaacg gctctaacct gctccgccct
    10621 gatggttctg ccgatattgc cttccgcgca caaaccgtcg aacccatagc aggaaagccg
    10681 gtaatgctgc ccgtctgcat ccagtttgat tgcccgtccg ctgcggttgg gggcggtaac
    10741 ggtcaattcc gcatattcga atgttttttc ttgttcgtga aatgccgtca ggtaaggtgc
    10801 aataaaaacg gcggacaaca gcagacagct tatggcggca aaccataccc agcgataata
    10861 tagtggatta aatttaaacc agtacagcgt tgcctcgcct tgccgtacta tttgtactgt
    10921 ctgcggcttc gtcgccttgt cctgatttaa atttaatcca ctatatttca cgcttacccc
    10981 ttgtttctca aatgccgtct gaaaaaacgg ctgcatatgt tgtctacaaa atatcgggaa
    11041 gcataacaga caaaatgccg tctgaaatat tttcagacgg catttcttat ccgaaacgga
    11101 ttatttttgc gtttcaaccg cttccaatgc acgcagggcg taagtgtaag cggcaccggc
    11161 attcagggcg atggcggttg ccaatgcgcc tgcgatttcg ctgtcggtcg caccggcttt
    11221 ggcggcagcg gcggcgtgaa cgctgatgca gctctcacaa cgtgtggtaa tggcaacggc
    11281 gatggcaatc agttcgcgcg ttttggcatc aagtgcttcg gcggcggcgg cctgttccaa
    11341 tgcgccgtag gcctgcagca ttttaggatg cgccttaccc agctcgccga acgatttttt
    11401 aaccaatgcg gtatgttctt tccaatcttt aaacattttc ttttcctttc tcttgcgttt
    11461 aaccctgata cgcgcttgcg tatctgtttt cgatgtgcgt attattgcaa ttattcagtt
    11521 gtgtttctcg tttaatcatc tcattttatg gttcaaaaag atttatggac attctggaca
    11581 aactggtcga tttcgcccaa ttgacgggca gtgtggatgt gcagtgcctt ttgggcggac
    11641 aatggtcggt acggcatgaa accttgcaac gcgaaggact ggtacacatt gttacatcgg
    11701 gcaacggcta tctctgcatc gacggcgaaa cttccccgcg tccggtcagt acaggggata
    11761 ttgtattttt cccgcgcggc ttgggtcatg tgttgagcca cgacggaaaa tgcggagaaa
    11821 gtttacaacc ggatatgcgg cagcacggtg cgtttacggt caaacagtgc ggaaacggac
    11881 aggatatgag cctgttttgc gcccgtttcc gctacgacac ccacgccgat ttgatgaacg
    11941 ggctgcctga aaccgttttt ctgaacattg cccatccgag tttacagtat gtggtttcaa
    12001 tgctgcaact ggaaagcaaa aaacctttga cggggacggt ttccatggtc aacgcattgt
    12061 cgtccgtcct gctggtgctt atcctgcgcg cctatctcga acaggataag gatgtcgaac
    12121 tctcgggcgt attgaaaggt tggcaggaca aacgtttggg acatttaatc caaaaggtga
    12181 tagacaaacc ggaagacgaa tggaatgtcg acaaaatggt ggcggctgcc aatatgtcgc
    12241 gcgcgcaact gatgcgccgt ttcaaaagcc gggtcggact cagcccgcac gcctttgtga
    12301 accatatccg cctgcaaaaa ggcgcgttgc tgctgaaaaa aaacccggat tcggttttgt
    12361 cggtcgcact gtcggtaggc tttcagtcgg aaacgcactt cggcaaggcg ttcaaacggc
    12421 aatatcacgt ttcgccgggt caataccgga aagaaggcgg gcaaaaataa atcggggctt
    12481 caaacgcaaa tgccgtctga aaaggctttc atacagcatt tgcgtaccgc gtcatttcaa
    12541 gggctgcatc ttcatcactt ccatcaaaaa gttggtaaat gcggggttgt tgggtttgac
    12601 atccatattt ttccaacgct gctgccagcc gcgcaaggca ttctggatat acagcttgga
    12661 ctgttccgta ttgattgcgc cccgctggct gtctatcgcc gaacgcaggt agatttcata
    12721 catactgtca tcgacggcat tgcgtccgac caggcgtttt ctgaagttgt tcagatattg
    12781 cgccgcctga accttggtca ttttaccgat acccacctga tagcccaagc gcgtcgcttc
    12841 atcgctgatt ttggcaacat ccgtccaatg cgaagaggca aggcggaaac cttttgcagg
    12901 tgcttccgtt ttgacggtat tgataggatt cacggggatt tccgtcaatg tgggcacata
    12961 aatagactgg cagccggaaa gaactgccgc aatggaaaga gggataaggt attttttcat
    13021 gcccccatta taatcaagtt tgccttgaga aaacaaattg ttcggcaaga aaaataaaat
    13081 ttcggcatca gaagcaggca aaaacacatt ccacaagcct tgccgcaagg tttacaatcc
    13141 gaccgtcctt atcgcaacga ccgtttatgg ataccgcaaa aaaagacatt ttaggatcgg
    13201 gctggatgct ggtggcggcg gtctgcttca ccattatgaa cgtattgatt aaagaggcat
    13261 cggcaaaatt tgccctcggc agcggcgaat tggtcttttg gcgcatgctg ttttcaaccg
    13321 ttgcgctcgg ggctgccgcc gtattgcgtc gggacacctt ccgcacgccc cattggaaaa
    13381 accacttaaa ccgcagtatg gtcgggacgg gggcgatgct gctgctgttt tacgcggtaa
    13441 cgcatctgcc tttggccacc ggcgttaccc tgagttacac ctcgtcgatt tttttggcgg
    13501 tattttcctt cctgattttg aaagaacgga tttccgttta cacgcaggcg gtgctgctcc
    13561 ttggttttgc cggcgtggta ttgctgctta atccctcgtt ccgcagcggt caggaaacgg
    13621 cggcactcgc cgggctggcg ggcggcgcga tgtccggctg ggcgtatttg aaagtgcgcg
    13681 aactgtcttt ggcgggcgaa cccggctggc gcgtcgtgtt ttacctttcc gtgacaggtg
    13741 tggcgatgtc gtcggtttgg gcgacgctga ccggctggca caccctgtcc tttccatcgg
    13801 cagtttatct gtcgtgcatc ggcgtgtccg cgctgattgc ccaactgtcg atgacgcgcg
    13861 cctacaaagt cggcgacaaa ttcacggttg cctcgctttc ctatatgacc gtcgtttttt
    13921 ccgccctgtc tgccgcattt tttctgggcg aagagctttt ctggcaggaa atactcggta
    13981 tgtgcatcat catcctcagc ggtattttga gcagcatccg ccccactgcc ttcaaacagc
    14041 ggctgcaatc cctgttccgc caaagataaa aaatgccgtc cgaacatcct tcagacggca
    14101 tatcgggctt tatttccccg ccttcacatc ctgccactgg cgcaccataa acttcaatgc
    14161 cgccggctgg ataggcacca tgataaagct gtttttcaaa tcctcctcgg ttgggaaaat
    14221 cgtattgtcg tttttaaatt cgtcttccat cagctcacgc gccggcttgc tcgaaggcgc
    14281 ataagtaacg aaattgccgt ttttcgccga cacttccgga tcgaggaagt cgttgatgta
    14341 tttgtgcgcg ttggcgacgt ttttcgcatc tttcggaatc acgaaagaat ccacccaaat
    14401 ccccacgccc tctttgggca tcatcacgcg gattttttcc ttgccgcccg cttcttcggc
    14461 acggcgtttg gcgatgttca aatcgccgcc gaaaccgatt gttacgcagg tatcgccgcg
    14521 cgccaaatca tcgataaagc cggacgaagt aaagcgtttg atattggggc ggtttttctt
    14581 gagtagggcg gttgcctccc tgatgtcttc cgtattgctg ctgttcgggt ttttacccaa
    14641 atagttcaac accataggat agatttccgc cgcgctgtcc aaatagctga tgccgcattg
    14701 cttgagtttg gacgtgtatt cggggtcgaa caccaaatcc cactggttgt ccggcagctt
    14761 gtccgtaccc aaagcctttt tcacgcgttc ggtattgatg gcgaaggtat ttgtccccca
    14821 ataaaacggc acggcgtatt cgtggccggg atcgaccccg tccatcagcc tcatcatttc
    14881 agggttgagg tgtttataat tgggaatcag cgacttatcg attttctgat acgcacctgc
    14941 cttaatctgc ctgcccacaa acgcattgga cggcgcgaca atgtcgtaac cggacttgcc
    15001 tgtcagcacc ttgctttcca gcgtttcatc gctgtcgtac acatcataag taaccttgat
    15061 gccgtttttc ttttcaaaat cggcaacggt ttccggatcg acatattccg accagttgta
    15121 aattttcaat acgttttggt tttccgccgg tgccggtttt tcggcaggcg gtttgtccga
    15181 accgccgcac gctgcaagca gcaaagcagt caggacggcc aggggcagat gtttggtcat
    15241 tatcattcct tgcatatcgg gttggagaaa gcggccatta tagccgatat tggcaacagg
    15301 gcttcagacg gcattcaaaa tcccgccaca ctcttccgaa aaccgccgct tccatagcta
    15361 gaaacaggga tttgcggtaa gataccgccg ttcgttttcc ctgcttttac catgacaaga
    15421 catttgagag acattgaaaa aattatgaaa acctccgaac tgcgccaaaa attcctaaaa
    15481 ttttttgaaa ccaaaggcca caccgtcgtc cgctcttcca gcctcgtgcc gcacgacgac
    15541 ccgaccctgc tgtttaccaa cgcgggcatg aaccagttta aagacgtatt cttaggtttc
    15601 gacaaacgcc cgtacagccg cgccaccacc gcgcaaaaat gcgtacgcgc aggcggcaag
    15661 cacaacgact tggaaaacgt cggctacacc gcccgccacc acaccttctt tgaaatgatg
    15721 ggcaacttct ccttcggcga ctacttcaaa cgcgacgcca tccatttcgc ttgggagttt
    15781 ctgacttccc ccgaatggct caacatccct aaagacaaac tgttggcgac cgtttacgca
    15841 gaagacgacg aagcctacaa catctggttg aacgaaatcg gtatgccgtc tgaacgcatc
    15901 gtccgcatcg gcgacaacaa aggcgcgaaa tacgcgtctg ataatttttg gcaaatgggc
    15961 gacaccggcc cttgcggccc ctgctccgaa attttctacg accacggcga agaaatttgg
    16021 ggcggcattc ccggcagccc cgaagaagac ggcgaccgct ggatcgaaat ttggaactgc
    16081 gtatttatgc agttcaaccg cgacgaacaa ggcaatatga atccgctgcc caagccgtcc
    16141 gtcgataccg gcatgggttt ggagcgcatg gcggcagtaa tgcaacacgt ccacagcaac
    16201 tacgaaatcg acttgttcca agacctgctc aaagccgttg cccgcgaaac cggcgcagct
    16261 ttcagcatgg aagaaccaag cctaaaagtc atcgccgacc acatccgctc ctgctcattc
    16321 ctgattgcag acggcgtatt gccttccaac gaaggccgcg gctacgtatt gcgccgcatt
    16381 atccgccgcg ccgtgcgcca cggttacaaa ctgggtcaga aacaagcatt tttctacaag
    16441 ctcgtgcctg atttggtgaa agcgatgggc gacgcgtatc ccgagttgaa agagaagcag
    16501 acgcaaatta tggaagccct gcgcgcggaa gaaagccgct tcggcgaaac gctggaaaaa
    16561 ggcatgggct tgttcaacca agtctataat gaattgaaat tcaatcaaat ttttgatctt
    16621 ctggcgaaag aatttaaggt tacacctgtt gaagatattg atcttgatat gtttagtaca
    16681 agaaattttg taggaagaag tgctgaaatt ccttatatat caaatcaaca ccctaacgtg
    16741 gattatcccg ctcctatggg gaacgtaaat gaaaaaattt atgctatgcc agtgagatta
    16801 acagatggaa gaattggtat taatattttt cctactgatg aaactgcacg cctaatcctt
    16861 agcaatgatt ggaatagttt gcgcttctat tctttttgta attcgttgat tacttattat
    16921 caacagaaag gtcaattaga aacattaaaa ttgaacggcg aacacatctt caaactctac
    16981 gacacctacg gtttccccta cgacctgact gccgacatct gccgcgaacg caatatcgaa
    17041 ctggacgaag caggcttcga gcgcgaaatg gaagcccaac gcacacgcgc acgcgccgca
    17101 caaagcttca aagccaacgc ccaactgcct tacgacggtc aagacaccga gtttaaaggt
    17161 tatagcgaac gccaaaccga atccaaagtc ctcgccctct acaaagacgg cgagcaagtc
    17221 aacgaattga acgaaggcga cgaaggtgcc atcgttatcg actttacccc gttctatgca
    17281 gaatccggcg gccaagtcgg cgacgtcggc tatatctttg caggcgaaaa ccgctttgaa
    17341 gtacgcgata cccaaaaaat caaagcagcc gtattcggcc aattcggcgt acaaacttca
    17401 ggccgtctga aagtcggcga cagcgttacc gccaaagtgg acgacgaaat ccgcaatgcc
    17461 aatatgcgca accacagcgc gacccacctg atgcacaaag ccctgcgcga cgtattgggc
    17521 ggacacgtcg aacaaaaagg ctctttagtt accgccgaat ccacccgttt cgacatttcc
    17581 catccccaag cggtcactgc cgaagaaatc gccgaagtcg aacgccgcgt caacgaagcc
    17641 gttttggcga acgttgccgt caatgcagcc attatgagca tggaagacgc gcaaaaaacc
    17701 ggcgcgatga tgctcttcgg cgaaaaatac ggcgaagaag tgcgcgtact gcaaatgggc
    17761 ggtttctcta ccgaattgtg cggcggcaca cacgtttcac gcaccggcga catcggcctc
    17821 ttcaaaatca tcagcgaagg cggtattgcc gcaggcgtgc gccgtatcga agccatcacc
    17881 ggcctgaacg cactcaaatg ggcgcaagag caagagcgtt tggtgaaaga cattattgcc
    17941 gaaaccaaag cccaaaccga aaaagacgta ctggcaaaaa tccaagcagg cgcggcacac
    18001 gccaaagcat tggaaaaaga attggcacgc gccaaagccg aactcgccgt ccacgcaggc
    18061 gccaaactct tggacgatgc aaaagacttg ggcgcagcca aactcgttgc cgcccaaatc
    18121 gaagccgacg cagccgccct gcgcgaaatc gttaccgatt taaccggtaa atccgacaac
    18181 gccgtgattc ttttagcggc agtaaacgac ggcaaagtct ccctgtgcgc cggcgtatcc
    18241 aaaccgttga ccggcaaagt gaaagcaggc gatctggtta aatttgcagc cgaacaagtc
    18301 ggcggcaaag gaggcggcag accagatttg gcacaggcag ggggcacgga tgcaggcaaa
    18361 ttgcccgccg tgttggatag cgtgaaagac tgggtcggcg cgaagctggc ttgatggaga
    18421 aaggcagcct gaaagggatt caggctgcct tttgtgttaa agatgccgtc tgaaagatat
    18481 tttcagacgg cctctgtcag tttatttggc tttataccta ccattgaata gcgattcaga
    18541 aggtatccag ccatctgcca aatcatccaa catcttaatc caatactcta ggcgtttttc
    18601 tgtcgggacg ctttctcccc aatattcgac aattagagca tcatccattt ccaaagcagc
    18661 tttttcaatt tcatgctcaa tcaattttaa agatttttct acatagtttc cgccacggta
    18721 gtcttccgcc gagttggcaa cgctgcccgc actgaataag tcccgcgcct gatgacaaag
    18781 cacaccgcga taggtaatca gatacaggac ggcattatcg tatttgtgct tcgccctgcc
    18841 tgagcagaca atacgggggg agactaatgc tgcttcagct cggaggcgga ttttttcttc
    18901 ctgcggcagg gaagtgtaaa ggcgcacttc caaaggcaga tcatggctgt ctactgcgtc
    18961 aatgtcttct atccaccata accgctcgcc ttctttcagc ctgttacggg catattttcg
    19021 gatatattcc attttttcat gcatatccaa atcggcaaat tcagcatagg aaataccgaa
    19081 accctcaaac agagacggtc gatcagattc tatttctacc tcaaagcgcg gaacatgcga
    19141 tgtgcggaca tgaattacgc tatcttcgta aagttgccat ttcacatcgg gaatgccccc
    19201 catttttccg aatatcacat agatatgctg tacaccgtca gctttgtttt tctcttggat
    19261 actgtttgct acgcttcgcc aagtatcttt tagcgtgaat ttgacttcta cgccatattc
    19321 ccctattgga acatcgggga aaatttgcgg cacaggttca ggattgataa ctatgtcagc
    19381 ataagcggga atttttgcaa tgcacagcgc acgaactctg ttttcaaaaa tatcttggga
    19441 tttgaaaggt gcgttttttg cctcttgcct caatacggtg caaacctcgt ctaaaaactt
    19501 ctcaaactcc ttttttgtca gcataatgca ttaccactta aaaatataaa gtagtaattt
    19561 tatcttattt aacagggtta tttaagtgcc ttactgacag cggcggcgat gtgccaccct
    19621 aaaacaggag ggacggcgtt gccaatttgc cgttctgtgg cacgcaattt tgcctggaaa
    19681 ataaaattgt cgggaaacga ttggatgcgc gccgcctcac gcatggagat gcggcggggt
    19741 aattcgtaat gccactgtat gtttccatgg cattctgccc taatagtgta gcccgccctt
    19801 tcggcatcca attttcgact accttgatcg gggctttttt ctgctctact ccaaatatgg
    19861 ttggcaattt cgtcttctac tttgtcgacc aaatcgccta tagcctgtct ggctgttaca
    19921 tagctgttgc tggtatttgt tttttcaatc tgtatttcgg gaatttcagg tagccttcca
    19981 acgataataa ctcgctcccg agtctgtgga acaccgtaat cggctgcatt cagcaagtag
    20041 taatctacct gataacccaa attgcgaaaa tctgaaagca ctgtttccaa atctttccga
    20101 tgatgcttca tcagtagccc tttgacattt tcagcaacaa atattttggg gcgaacgcgt
    20161 tcaacagcag acaacatggc tttatacagc ccgctgcggc tgcctgaaat acctgcacct
    20221 ttaccattaa tagaaatatc ctgacaagga aagccaccga taatgatgtc tgcgctagtg
    20281 ggtatttcat ccaaatgctg ccaaatatca ccatgtacaa tgtgatttcc taagttgtgg
    20341 cggtaggttc taacagcgtg ttcgtcgatt tcgttcgccc aaataatatc aaaatcatgt
    20401 ttgtcataag tacggtttaa aaactcaaag ccccccagaa aacccaaatc cattccgcca
    20461 caaccgctaa ataaagaaat aattttatat tttttttcgc ggtcttcttg cttttcctgt
    20521 ttggtcatta actccataca tttaagataa aaagcatggg aaaaagtacc tctatttact
    20581 ttgttacaaa ttgcatttgc cgtttcactt tccccttgct ccaagaataa ttctgataat
    20641 tgtataaagc caattccatg ctcatgcatt ttggctttta tggcatctcc agctaacttg
    20701 ttccaatttt ttcgtgcaaa ttcggtcatg gttaatcttt cagtcattca taaatgacat
    20761 tattttagcg ttttttataa tttaagccaa gatttaaaat ctacctttag gtttacaggc
    20821 cgtctgaaaa caaaaatctc gttttcagac ggcctttttc cgctaaaatc cccctaccgt
    20881 ccaacccgaa acaaggagaa ccatcatgca agttcctact tccgccatca tcaacggcga
    20941 atttgccgac aaatacggca aacgcggcag caagccgtag ccagcacccc tgtcaaccgc
    21001 gtgcgtggct agaccacaca ccctaccact gcgggcgacg caaaccttaa gattgaggtg
    21061 tagggtgtgt gcggtacgca cgcacgcggt ttttgttact accgaatgat tccaaaccat
    21121 gccgtaatcc agtcagcagc aaactcagct tgggtcatgt accaacaaaa ctcaatatca
    21181 aaggccgtct gaagaataat tttcagacgg cttctctcta tcaaaagcag cctgcacatt
    21241 caaaaatcga agtgcaggct gctttttgtg atgattggaa aaaacacaca ctatttttat
    21301 actgtatatt gtgcaggtac aaagtaaaac gaattaccca aagaaattcc catgtttaag
    21361 acgctcaaaa gcatttggca gggacttacg caaaaaggca aaatcttccc gtaccaactg
    21421 gcattcacgc tgctgattcc tttgcgtaac tgggcgcttt caccgcaaca aatcacgcaa
    21481 cggctgcact ttgttccgca ccaccgaatt tgctgcgggg cgggttattt cagttgcgta
    21541 ggatgtgctt cagcccaccg tttcctcatt tttgcttgtt aattggtggg ctgaagccca
    21601 cactacggtt aatacggtta ctgattcgtt tccccctgca tccgaatcac gccgcacacc
    21661 gcaaaaaacg cgcgcccgat gcgcaaccgc ttccgacatt tggcgcaatg agacaaaacg
    21721 gcaatatgcc gatacggata cgtcatcctc cgcctgcctg ttttttatat catactcaat
    21781 tttatctgtg cgttacgacg gcatgccgtc tgaagggtgt ttatgtctgc atctaagaaa
    21841 tttccgattc ctttgagcta tttcagcatc gcgctgggct tgtttgcctt ggggctgtcg
    21901 tggcgttacg gcgcgtctgt cgggctgctc cccgccttgg ccgccgaatc gctgcttgcg
    21961 gtggcttcgg ttgtctggct cttgctggtg gcggcatacc tgatcaaaat gtttgcgtac
    22021 cgaaacgatt ttttgtctga tttgcgcgac ttggtgcaat gctgcttcat cagcgcgatt
    22081 ccgattaccg ctatgctgga gggactcgcg ctgaagccct atcaggcagg cgcggcggca
    22141 gtcctgattt atgtcggcgt tgccggacag ttggcgtttt cgatgtatcg ggcggccggt
    22201 ctgtggcgcg gcctgcattc cttggaggcg acgacgccga ttatttatct gcctacggtt
    22261 gcgacaaact ttgtcagcgc gtcatctctg gccgcgttgg ggcatcatga ttatgcagct
    22321 ttgtttttcg gcgcgggtat gttttcctgg ctgagcttgg aagcctccat cttgggcagg
    22381 ctgcgcacgg cggcaccggt cggcacggcg gcgcgcggcg tggtcggcat ccagcttgcg
    22441 cccgcctttg tcggctgcgg cgcgtatttt gccgtcggcg gtaaagtcga cggttttgcg
    22501 ttggcattaa tcggctacgg ctgcctgcag cttttgttct tgctgcgcct gacccgctgg
    22561 ttttgggaag gcggttttac gatgagcttt tggggatttt cattcggttt cgcggcaatg
    22621 gcaggatgcg gtctgcatct ggcggcttct ggcatattgt cgggcttggg gctgacgctt
    22681 gccaccgccg gatcggcagg cgtggcgctg ctgcttgtcg gtacgctgca ccggatagcg
    22741 acggggcgtt tcttggtacg cggctgatgc gttttgccgc cttgtcaaaa atgccgtctg
    22801 aacgcccaag ccttcagacg gcatttttta tttcaaaccc ttacaggtag aatttttcga
    22861 ggactttcag gttgtcatcc aatttgtaca ccagcggctg accggtcggg atttccaagc
    22921 ccatgatgtc ttcgtcggaa ataccctcga tgtgttttgc cagcgcgcgc agggagttgc
    22981 cgtgcgccgc taccaagacg cgtttgccgc tcaaaatcgc gggggcgatt tggtcttccc
    23041 aaaacggcaa tacgcgatcc agcgttactt tcaggttttc gccgtcgggg ataacatcgg
    23101 caggcagatg ggcatagcgg cggtctttgt gtgcggaaaa cgcgtcgtct ttgtccaaaa
    23161 gcggcggcag agtgtcgtag ctgcgccgcc agatgcggac ttgctcgtcg ccgtattgtt
    23221 cggcggtttg ttttttgtcc aaaccttgca gttggccgta gtggcgttcg ttcagccgcc
    23281 acgttttgat ttgcggtacg aacagttggt cggattcttc caaaacgatg ttgcaggtct
    23341 taatcgcgcg ggtcaggacg gatgtgaagg cgatgtcgaa ctcatagccg ttttctttca
    23401 gttttttacc ggcggcggca gcctcggcaa gcccctgctc gctcagcttc acgtcgcgcc
    23461 agcctgtaaa caggtttttc gcgttccatt cgctttgtcc gtggcggata aataccagtt
    23521 ccatatcgtc tccaatgtgt gaaagtagga aagccttatt tataacatat tttcacattt
    23581 cccgtatttg attcagattt agacacggtg cccactatgg tttgccgttt tgatttacaa
    23641 taatgtcctt tgctttacat tccgcataca caatgtttca acacacagga cgacacataa
    23701 agcaccgccc tatgtgttgc cctgatttgg aaggggttgc cccctcccaa ataaagtctg
    23761 attctaccgc cccgaaggac agatgtccaa gtggcggggg ttcaaccgaa aaggaaatac
    23821 gataaatatg caaccgcacg ctccacatac cgattccaat acgctgatgc tcggccgata
    23881 cgccgaacgc gcctatctcg aatacgccat gagcgtggtc aaaggccgcg cgctgcctga
    23941 agtttcagac ggccaaaagc ccgttcagcg gcgcattttg tttgcgatgc gcgatatggg
    24001 tttgacggcg ggagcgaagc cggtgaaatc ggcgcgcgtg gtcggcgaga ttttgggtaa
    24061 ataccacccg cacggcgaca gttccgccta tgaggcgatg gtgcggatgg cgcaggattt
    24121 taccttgcgc tatcccttaa tcgacggcat cggcaacttc ggttcgcgtg acggcgacgg
    24181 ggcggcggcg atgcgttaca ccgaagcgcg gctgacaccg attgcggaat tgctgttgtc
    24241 cgaaatcaat caggggacgg tggatttcgt gccgaactac gacggcgcgt ttgacgaacc
    24301 gctgcacctg cccgcccgcc tgcctatggt cttgctcaac ggtgcgtcag gcattgcggt
    24361 gggtatggcg accgaaatcc catcacacaa tttgaatgaa gtcacacagg cggcgattgc
    24421 actgttgaag aagccgacgc tggaaaccgc cgacctgatg caatacatcc ctgctcccga
    24481 ttttgccgga ggcggtcaaa tcatcacgcc ggcggacgaa ttgcgccgta tttacgaaac
    24541 cggcaagggc agcgtgcgcg tgcgtgcgcg ttacgaaatc gagaagctgg cgcgcggaca
    24601 atggcgcgtc atcgtaaccg agctgccgcc gaacgccaat tccgccaaaa tccttgctga
    24661 aatcgaagaa cagaccaacc cgaaaccgaa agcaggcaaa aagcagctca accaagacca
    24721 gctcaatact aaaaagctga tgctggattt aatcgaccgc gtgcgcgacg agtcggacgg
    24781 cgaacatccc gtgcgccttg tatttgaacc aaaatccagc cgcatcgata ccgatacctt
    24841 catcaacacg ctgatggcgc aaacttcgct ggaaggcaat gtgtccatga acttggtgat
    24901 gatggggctg gacaaccgcc ccgcgcagaa aaacctgaaa acgattttgc aggaatggtt
    24961 ggatttccgc accgttaccg taacacgccg tctgaaattc cgtttgaacc aagtggaaaa
    25021 acggctgcac atcctcgaag gccgtctgaa agtctttctg cacatcgacg aagtgattaa
    25081 agtcatccgc gaatcagatg acccgaaagc cgatttgatg gcggcgttcg ggctgaccga
    25141 aatccaagcc gaagacattt tggaaatccg cctgcgccag ttggcacgtt tggaaggttt
    25201 caaactcgaa aaagaattga acgaattgcg cgaagaacaa ggccgtctga acatcctttt
    25261 gggcgatgaa aacgaaaagc gcaagctgat tatcaaagag atgcaggcgg atatgaaaca
    25321 atacggcgat gcacgccgca cgctggtgga agaggccgga cgcgccgtgc tgacacaaac
    25381 caccgccgac gaacccatca cactgattct gtcggaaaaa ggctggatac gcagccgtgc
    25441 cggacacaat ctcgatttga gccaaaccgc gttcaaagaa ggcgaccgcc tcaaacaaac
    25501 ccttgaaggc agaacggttt tacccgtcgt catcctcgat tcattgggca gaacctatac
    25561 actcgatgcc gccgaaattc ccggcggacg cggcgacggc gtgccggttt catccttgat
    25621 cgagttgcaa aacagcgcga aacccgttgc gatgttgaca ggattgccgg aacaacatta
    25681 tttattatca agcagcggcg gctacggctt catcgccaag ttggctgata tggtcggacg
    25741 cgtaaaagcg ggcaaagtgg tgatgaccac agacagtggc gaaaccgtcc tgccgccgat
    25801 tgccgtctat gcctcctcgt tcatcaaccc cgactgcaaa atcattgccg ccaccagtca
    25861 aaaccgcgcc ctcgccttcc ccatcggcga attgaaaatt atggcgaaag gcaaagggct
    25921 gcaaatcatc ggattaaacg ccggcgaatc gctgacgcat accgccgttt cttccgagcc
    25981 ggaaatcctg attgaaagcg aaggcaggcg cggcgcggcg cacaaagacc gcatccccgt
    26041 ctccctgctt gaggcaaaac gcggcaaaaa aggcaaacta ttacccatat cgggcagcct
    26101 gaaacagctt tcttccccca aataaacccg attccacaca taattatggt gatttccaac
    26161 ccccgcgaac ttgaaaaact caaagaccgg attcccaatc tgatcaacat catccgcgtc
    26221 gccatcgttt ttccgctgat gattatgcac atcctcgggc tggaaaccgg cagccgtgcg
    26281 aacctgcacg cttcgtggac ggcgtgggcg ttttatgttt ggctcgccat tgcctgctgg
    26341 ctgattttct tttccatcat ccatccgcat tggcaatggc agtcgctgaa aatgccgcgt
    26401 ttcagcgcgg tggcggacat cacgatgatc ggcgtgctga cctacctgtt tggcggcatc
    26461 gattccggct tcggcatcct gatcctgccc ttcgtcgtct gctcctgcct gctcagctac
    26521 gggcgttacc ccctgctcta ttccagctac gccgccatcc tgctgatatt caacgccatt
    26581 gccgacggcg atatcggcaa atacccgctc atatcggatg cccgaaccgc ctcggtaacc
    26641 ttcatccttg tcgccgcctc ctatctttcc gccatcttca cctcactgtc ggtcagatac
    26701 atcgacagcg ccggccggct ggcacgcgac aaccacctcg cctaccggcg catcaaaggc
    26761 ttgagccaaa ccgtactcaa ccgcgttcag gaagcggtcg tcgtcatcaa cgtcgagcat
    26821 cagaccatac tgttcaataa aaaggcaaaa gacctgctac ccatgcttga aatcggacag
    26881 catactgccc tgttcgaccc tattaccgtt ttatgggaca aggcctcttc gcgtactttc
    26941 gaacgcaata tcgacacgcc cggcctgaac gccggcatcc gcgccgttcc ggtcaacaaa
    27001 gggccggaca agctgctcat cctctacatc cgcccgcaaa gcgaaattca ggcagaagcc
    27061 ctgtccgtca aacttgccgc gctcggacaa ctgaccgcca acctcgccca cgaaatccgc
    27121 aacccgatgt ccgccatccg ccacgccaac gacctgctgc gcgaaaatat ggaagcgggg
    27181 gcggcagatc cgttcaacgc caaattgtgc aaaatcatcg acggcaacgt ctgccgtatc
    27241 gacaaaatgc tcgaagatat ttcctcgcca acaagcgcaa caaaaccgaa cgcgaaacca
    27301 tcggcctgat accgttttgg gaagaattca aacaagagtt cctgctcggc catcccgatg
    27361 ccgccggctg catccgccta gatatgcagg gcaatcacct gactgcctat ttcgatcctg
    27421 cccacctgcg gcaaattatg tggaacctcg ccaacaacgc gtggcggcac agcagcaaac
    27481 gtaacggctc gattgccgtc gtcgcccgtc ctgcacaaaa aaacaccatc agcatcctgt
    27541 ttgccgacga cggcggcggc gttccgcccg aagtgcagga acacttgttc gaaccctttt
    27601 acaccacagc aaaaaacgga accggcttgg gactgtatgt cgcccgcgaa ctggcacacg
    27661 ccaatttcgg cgatttgacc tacctgccgg aagccaaatg tttcgaactc acattaccgg
    27721 aaaaaaccaa tgactgaact gcaacatccc gtcctcgtcg tcgatgacga aaccgacatt
    27781 ctcgacctga tggaaatgac cctgatgaaa atgggcttgc gcgtccatac cgcgtcaggc
    27841 gttgccgaag ccaaaaacaa gctcgacagc caacgctatt cgctcgtcct gaccgatatg
    27901 cgtatgccgg acggctcggg gctagaagtc gtccaacaca tcaacagccg cctgctcgat
    27961 acgccggttg ccgtcatcac cgccttcggc aatgccgatc aggcacagga agccctgcgt
    28021 tgcggcgcgt tcgaccccga taccatgcag atacaggact atctcgacca aatcgaacgc
    28081 gacatcatcg aacaaaccct caaacaaacc gaaggcaacc gcacgcaggc cgacaaacgc
    28141 ttgggcatca gcttccgttc catgcgctac cgtatggaac gcctcaacat cggctgacga
    28201 caaaacggca tccgcaccat ctccgcccac ccgaaaaaat gccgtctgaa acggcacggg
    28261 aaagcgggtt cgccccacgc ccgaacggac acaaaacacc atgaccgaca tccttattga
    28321 caacaccgcc accgaaaccg tccgcaccct gatacgggca ttcccccttg tgcccgtttc
    28381 ccaaccgccc gaacaaggca gctacctcct taccgaacac gataccgtca gcctcaggct
    28441 tgtcggggaa aaaagcagcg tcatcgtcga ctttgcctcg ggagccgcac aataccggcg
    28501 cacaaaaggc ggaggagaac tcatcgccaa agccgtcaac cataccgcca aacccaccgt
    28561 atgggatgca accgcaggat tggggcgcga cagcttcgtc ctcgcctcgc tcggactgac
    28621 cgttaccgcc ttcgagcagc atcccgccgt cgcctgcctg ctttcagacg gcatccgccg
    28681 cgccctcctc aatcccgaaa cgcaagacac cgccgcgcgc atcaacctcc atttcggcaa
    28741 cgccgccgaa cagatgcccg cccttgttca aacacaaggc aaacccgaca tcgtctatct
    28801 cgaccccatg tatcccgaac gccgcaaaag tgccgccgtc aaaaaagaaa tggcctactt
    28861 ccaccggctc gtcggcgagg cgcaagatga ggccgtcctc ctccataccg cacgccaaac
    28921 ggcaaaaaaa cgcgtcgtcg tcaaacgccc ccgcctcggc gaacaccttg ccggacaagc
    28981 ccctgcctac caatacacag gcaaaagcac ccgcttcgac gtttacctgc cctacgaagc
    29041 ggacaaggga taacgcccat aaaacaagac accgaaaaat ttgccgttct tatgcaaacg
    29101 agaaaccggt ttttgcgttt cgactgtttt ggataaatca tcacacctta aagtttgtca
    29161 ttcccacgga agtgggaatc tagaaatgaa aggcaacagg aatttatcgt aaatgactga
    29221 aaccgaacgg actagattcc cgcctgcgcg ggaatgacga tgtaaaatta tccgggattc
    29281 aaaaagacag actttcgcgt ccgtgggaat gactgcggaa agatgatttt tattttgtca
    29341 taaaaatccg caccttaatc agttggcggt taaatcaaac ttttagggtg cagattactt
    29401 tttatgattt cagacggcat tttgacaggc cgcaaaccta tttcggcaat accaaaaact
    29461 taatcagcag ttctttgaat acaaaaccga acacgcccaa gcccaaaacc aaaaacaaaa
    29521 tggcgatgcc gaatttgcct gctttggact ccttgcccaa attccaaacg ataaaaccca
    29581 aaaaaataat caagccggtc aggcagattt tcaacgccca atcggcaaaa accgcttcat
    29641 ccatattttt ttcctattgt tgatgtgtat gccatataag ataagggttt cagacggcat
    29701 ctgctgtcca atgccgtctg aaacacgcaa tcagcgtgcg agtgcctgtt tcaaatcgtc
    29761 aatcaaatcg ccaacatatt ccaaaccgac cgacaggcgc accaatccgg ggcggatgtt
    29821 ggcggcgagt ttttcttcgg gctgcatcct gccgtgcgtg gttgtccacg gatgggtgat
    29881 ggtcgagcgc acgtcgccga ggttggcggt acgggaaaag agttccacgc cgtccacgac
    29941 tttccacgcg gctgcttggt cggcgacttc aaagccgatg acgatgccgc cgccgttttg
    30001 ctgtttgcgg ataagcgccg cctgcggatg gtcgggcaat ccggtgtagt acacggcttg
    30061 aacctgcggc tgcgcttgca gccattgtgc gattttcagg gcgttgtcga actgtttttc
    30121 catacgcagc gacagggttt ccacgccgct caacaactgc cacgcattaa acggcgacat
    30181 cgccagcccg caagagttgc agtaaacggc ggcctgcgcc atcaattctt ccgaacccgc
    30241 caacacgccg cccatcacgc gtccgtgtcc gtctatggct ttggtcgcgg aggaaacgga
    30301 aatatccgcg ccgtgtttca aaggctgcga gccgacgggc gacagcaggc tgttgtccac
    30361 caccaaaatc gcgccgatgc cgtgcgccaa ttccgccaag gcttccaagt cggccacttc
    30421 gcccaaggga ttggacggcg tttccaaaaa cagcagtttg gtgttggctt tgacggcggc
    30481 tttccattcg tttatatcag tcggcgacac gtggctcact tcgatgccga atttggtaac
    30541 gatgttattg ataaagccga cggtcgtgcc gaacaggctg cggctggaaa ccacgtggtc
    30601 gcccgcctgc aaaaaggtga aaaacgccgc ctgaatcgca gacatacccg tcgaagtggc
    30661 gaccgcgcgt tccgcacctt ccaaagcggc gatgcgtttt tcaaaggcgg ctgtggtcgg
    30721 gttggcggta cgggtataag tgaacccttt gatttttttt gaaaacaaat cggcagcgtg
    30781 ttgggcgttg tcccacatga agctgctggt cagaaacaat gcctgattgt gttcgcggta
    30841 ttcggtttgt tctttgccgc cgcgtatggc gagcgtttgc ggatggagtt ttttgctcat
    30901 cggtgattcc tcggttttgt ccgttcggca acggagcgtg cgcccgttgt ttaatttgtt
    30961 aatattttgc gcctgttcta tgatgctttc aagtcggatg agaatgcaaa tgccgtctga
    31021 aacggctttc agacggcatg gcaatcagcg tttgtatttt aactcgtact tgatgtcgtt
    31081 gaggattttg cggacatcgt gttccaacac gtcttcgact accgcccccg cctgctcgtg
    31141 cagcatctgc tggagctgat aggtgaaaac cgccatctgc ttttgcaccg ccgttcggat
    31201 gatgccgttg acggtatcgg tcagatgcgg gcgcaggcgt ttgatcagcc gttcggtcag
    31261 ctcctgttcg gacaggcaga acacttcgcg ccggttgacg gctttcgggt tcaggatatt
    31321 gatttggacg ggcatcaacg cctcttccgc accgccttcg ccgttttccg caaccccgtc
    31381 tgccgccgta cccgattctg ccgcatcggc gttttccctg ccttcaatct gtccggtttc
    31441 aaattcggca ctgtcttttt gggcatcgaa ccggattctc cgccgcgatt cgatgtgttt
    31501 ttccgaaacc gacatttgca gggaagcctg cgcgttgagc cagttttcct gaaggacaat
    31561 catcgggtcg gtttcgactt cctcgccgca atcggcaacg gcggcattgt gttcctcctg
    31621 ccattttttc agatacgcct tcaacacacg ggctcggctc tcatcgtcca gtttcggcac
    31681 aggcgcgtcc gttccggttt cagaggggcg ggacagcggc gcgtaagtcg gcactgcctt
    31741 catacggcgc gtctgacgca ggttttccaa acgtttttcc caattcggct ctttattcgc
    31801 atccattttc ggcttccggt tcttaatctt tgcaagcaga caaacccgcg cccaaagcgc
    31861 ggtttgatat aatggcgcat tttaacagat tcgcgaggat acatcatggg cagcatcgaa
    31921 cagcgtttgg aatatctgga agaggcgaac gacgtgctgc gtatgcagaa ccacgtcctg
    31981 tccaccgcat tcaaagcctt aatccgcgcc cttcccgccg aaaccgccga aatcgcggtc
    32041 gagtcgattc agcttgcttt tgaggacgcc ttggcagaat tgagctatga ggacagcccc
    32101 cataccgatt tgttccacga cgttacttat gcgtttttcc gtgaaaaaga acgttaattt
    32161 tatgttaaac tgatttttta ggctttttga ttaccgaaag gaattttgat gaatatgaaa
    32221 aaatggattg ccgccgccct tgcctgttcc gcgcttgcgc tgtctgcctg cggcggtcag
    32281 ggtaaagatg ccgccgcgcc cgccgcaaat cccgacaaag tgtaccgcgt ggcttccaac
    32341 gccgagtttg ccccctttga atctttagac tcgaaaggca atgtcgaagg tttcgatgtg
    32401 gatttgatga acgcgatggc gaaggcgggc aattttaaaa tcgaattcaa acaccagccg
    32461 tgggacagcc ttttccccgc cttgaacaac ggcgatgcgg acgttgtgat gtcgggcgta
    32521 accattaccg acgaccgcaa acagtctatg gacttcagcg acccgtattt tgaaatcacc
    32581 caagtcgtcc tcgttccgaa aggcaaaaaa atatcttctt ccgacgattt gaaaaacatg
    32641 aacaaagtcg gcgtggtaac cggctacacg ggcgatttct ccgtatccaa actcttgggc
    32701 aacgacaatc cgaaaatcgc gcgctttgaa aacgttcccc tgattatcaa agaactggaa
    32761 aacggcggct tggattccgt ggtcagcgac agcgcggtca tcgccaatta tgtgaaaaac
    32821 aatccgacca aagggatgga cttcgttacc ctgcccgact tcaccaccga acactacggc
    32881 atcgcggtac gcaaaggcga cgaagcaacc gtcaaaatgc tgaacgatgc gttggaaaaa
    32941 gtacgcgaaa gcggcgaata cgacaagatt tacgccaaat attttgcaaa agaagacgaa
    33001 caggccgcaa aataagcccg cccgtccgaa cacaatgccg tctgaagccc tttcagacgg
    33061 cattgttcat caatcggcct acaatgaact gcctgctgat ttctccctac cgcaaagcaa
    33121 caggcaaaga ttacaaatat caaaatccga gtaaaacagt attttattaa aacaaattga
    33181 taatcaagag attagaatta tgtattgtct ttaccgtaca aacgctggca ctatttcaac
    33241 ctgataaaaa acagccttca aaaaggttgc ttaaaacagc agcagacact taccgccaca
    33301 accttgaaaa ggaacacaat catgaccgtc atcaaacagg aagactttat ccaaagcatt
    33361 tgcgatgcct tccaattcat cagctactac catcccaaag actacatcga cgcgctctat
    33421 aaagcgtggc agaaagaaga aaaccccgcc gccaaagacg cgatgacgca gattttggtc
    33481 aacagccgca tgtgtgccga aaacaaccgc cccatctgcc aagataccgg tatcgcgacc
    33541 gtcttcctca aagtcggtat ggatgtgcag tgggatgcgg acatgagcgt cgaagaaatg
    33601 gttaacgaag gcgtgcgccg cgcctacact tgggaaggca atacgctgcg cgcttccgtt
    33661 ctcgccgacc ccgccggcaa acgccaaaat accaaagaca acacgcccgc cgtcatccat
    33721 atgagcatcg tgccgggcga caaagtcgaa gtaacctgcg cggcaaaagg cggcggttct
    33781 gaaaacaaat ccaaactcgc catgctcaat ccttccgaca acatcgtcga ttgggtattg
    33841 aaaaccatcc cgacgatggg cgcgggctgg tgtcctcccg gcatcttggg catcggcatc
    33901 ggcggcacgc ctgaaaaagc cgtgttgatg gcaaaagagt ccctgatgag ccacatcgac
    33961 atccaagaat tgcaggaaaa agccgcgtcc ggcgcggaat tgtccaccac cgaagccctg
    34021 cgcctcgaac tctttgaaaa agtcaacgcg ctgggcatcg gcgcacaagg tttgggcggt
    34081 ctgaccaccg tgttggacgt gaaaatcctc gattacccga cccacgccgc ctccaaaccg
    34141 attgccatga ttccgaactg cgccgccacc cgccacgtcg aatttgaatt ggacggctca
    34201 ggccctgtcg aactcacgcc gccgcgcgtc gaagactggc ccgatttgac ttacagcccc
    34261 gacaacggca aacgcgtcga tgtcgacaag ctgaccaaag aagaagtggc aagctggaaa
    34321 accggcgacg tattgctgtt gaacggcaaa atcctcaccg gccgcgatgc cgcacacaaa
    34381 cgcctcgtcg atatgctcaa caaaggcgaa gaattgcccg tcgatttcac caaccgcctg
    34441 atttactacg tcggccccgt cgatccggtc ggcgatgaag tcgtcggtcc ggcaggtccg
    34501 accacagcca cccgcatgga caaattcacc cgccaaatgc tcgaacaaac cggcctcttg
    34561 ggcatgatcg gcaaatccga acgcggcgcg gcggcgtgcg aagccatcgc cgacaacaaa
    34621 gccgtgtacc tgatggcggt cggcggcgcg gcatacctcg tggcaaaagc catcaaatct
    34681 tccaaagtct tggcgttccc cgaattgggt atggaagcca tttacgaatt tgaagtcaaa
    34741 gatatgcccg taaccgtcgc cgtagacagc aaaggcgaat ccatccacgc caccgccccg
    34801 ccccaatggc aggcgaaaat cggcatcatc cccgtcaaat cttgaggcgt catgccgtct
    34861 gaacacaaaa tctgctttca gacggcattt ccgcccccgg ttgcggtaca atccaccatt
    34921 tcatcactcg gcgacccaca ccgtgaaaat cctcatttta ggcaacggac aggtaggttc
    34981 taccgtcgca caaaaccttg ccgccatacc caacaacgac gtaaccgtta tcgacatcga
    35041 cgaaaaagca ttgcaggaaa caggcagccg cctcgatgtc caaaccgttt tcggcaacgg
    35101 cgcatccccc ttcacattag aacgcgccgg cgcggaagat gccgacttgc tgctcgcgct
    35161 ctcccgcagc gacgaaacca acatcgtcgc ctgcaaagtt gccgccgacc tgttcaacat
    35221 ccccggccgc atcgcgcgcg tccgttccag cgaatacctc gaatacctca gccccaagct
    35281 cgaaaacaac gaaaacggca gcctttccat attcggcata accgaaacca tcagccccga
    35341 acagctcgtt accgaacagc ttgccggcct gatagactgc ccgggcgcat tgcaggtttt
    35401 acgttttgca gacgaccgcg tgcggatggt catcatacag gcgcggcgcg gcgggttgct
    35461 tgtcggacgc agcattgccg acatcgccca agatttgccc gacggggccg actgccaaat
    35521 ctgcgccgtt taccgcaaca accgcctcat cgtccccgcg ccgcaaaccg tcatcatcga
    35581 aggcgacgaa atcctatttg ccgccgccgc cgaaaacatc ggcgcggtca tacccgaatt
    35641 gcgccccaaa gaaaccagca cccgccgcat catgattgcc ggcggcggca acatcggcta
    35701 ccgtctcgcc aagcagctcg aacacgcata caacgtcaaa atcatcgaat gccggccgcg
    35761 ccgtgccgaa tggatagccg aaaacctcga caacaccctc gtcctgcaag gttcggcaac
    35821 cgacgaaacc ctgctcgaca acgaatacat cgacgaaatc gacgtattct gcgccctgac
    35881 caacgacgac gaaagcaaca ttatgtccgc ccttttggcg aaaaacctcg gcgcgaagcg
    35941 cgttatcggc atcgtcaacc gctcaagcta cgtcgatttg ctcgaaggca acaaaatcga
    36001 catcgtcgtc tccccccacc tcatcaccat cggctcgata ctcgcccaca tccggcgcgg
    36061 cgacatcgtt gccgtccacc ccatccggcg cggcacggcg gaagccatcg aagtcgtcgc
    36121 acacggcgac aaaaaaactt ccgccatcat cggcaggcgc atcagcggca tcaaatggcc
    36181 cgaaggctgc cacattgccg ccgtcgtccg cgccgaaacc ggcgaaacca ttatgggaca
    36241 ccataccgaa accgtcatcc aagacggcga ccacatcatc tttttcgtct cgcgccggcg
    36301 catcctgaac gaactggaaa aactcatcca ggtcaaaatg ggctttttcg gataaaccgc
    36361 cccattccgg acacattgcc gccaagcggt atggaagcgg aaataatggt aggtgggctt
    36421 cagacggcat ccgccctccc cgtccttccc gcgtaagcgg gaatccagac cttgggatag
    36481 cggcaatatt caaaggttat ctgaaaattt agaggttcta gattcccgtt tccacgggaa
    36541 ggacgaagag ttgcgggaat ctagaccatt ggaaagcggc aatattcaaa ggttagctga
    36601 agctttagag gttctagatt cccgtttcca cgggaatgac gaaaggtggc gggaatccaa
    36661 accattgggc aacagcaata ttcaaagatt atctgaaagt ttgaggttct agattcccgc
    36721 tttcgcggga atgacgaaaa gtggcgggaa tgacgaagtt tcagacggca tcgcccgcct
    36781 gttttgatat ggcggcaccc cccccgacaa aaaaaacaat ccggaacgca tctgaccgtt
    36841 ccggcttgtt ttcaggcgaa tccgccgcat cagaacatac tgcgcacgcc catattgacc
    36901 tgccaagtct ggcgcatcgt gtgcatcgaa gacctttgcg cctcaaaata aagctgcctt
    36961 ccgttgtcgg cattaccacg caaaaaaaat gaattgcttg atattccaat gttttttata
    37021 tgtttttata ttgtgatgcg atcagacaaa cgcccccctg acatttgttt agacggcatc
    37081 gtattgctaa atttctataa gtatgtataa tgtccgtttc cacgcgccca tcgtctagag
    37141 gcctaggaca ctgccctttc acggcggcaa ccggggttcg aatccccgtg ggcgtgccaa
    37201 ttcaaaaacc tgcttgtttc aagcaggttt ttttattatg aatcgtcatt cccgcaccct
    37261 tcgtcattcc cgcaaaagcg ggaatctaga gcgtagggtt gaagaaaccg ttttatccga
    37321 taagtttccg tgccgacagg tctggattcc cgcctgcgcg ggaaggacgg cagagggtgg
    37381 acgatgctgt ctgaagcctg acaaagcatt tgatgccgtc tgaaacttcg tcattcccgc
    37441 aaaagcggga atctagagcg tagggttgaa gaaaccgttt tatccgataa gtttccgtgc
    37501 cgacaggtct ggattcccac tttcgtggga atgacgagtc ttttataacc tttaaggctg
    37561 ctctgcccaa tggtttggat tcccgcttat gcgggaatga cggggcgggg cgatgccgtc
    37621 tgaaacttcg tcattcccac aacccttcgt cattcccgtg aaaacgggaa tctagaactt
    37681 ctgaattttc agacggcttt ataaatattg ccgctgcccc aagggctaga ttcccgcctg
    37741 cgcgggaatg atgatttgga aatcacccga aacccaaaaa caactgaaac cgaacacact
    37801 ggattcccgc tttcgtagga atgacggaat tttaggtttc tgtttttgtg ggaatgacga
    37861 ataaagcgtg ccggtttatg ctcgccgcaa cacgcggttc agacggcatt gctctctttt
    37921 ttcattatca gtgggtgtag caactgtatt tttcaccccg tcgggcaaaa atacagttgc
    37981 tacgatgcac cccgccgccc tgccctgtgc cttgtcctgc aatacggcat ataatgcacc
    38041 acaaaccccg cgctgcggtt ttcagacggc atcgccgtgc ttttttacag gcattagccc
    38101 tttttatcgg acacaatatt aaggaggaac aaatgaaaag ctcttttgtg caaacgctta
    38161 ccatcgccgg ttcggattcg ggcggcggtg cgggcattca ggcggatttg aaaacgtttc
    38221 agatgcgcgg cgtgttcgga acgtgcgtca tcaccgccgt taccgcgcaa aataccttgg
    38281 gcgtgtcggc ggttcatctc gtcccgaccg aaaccatcac cgcacaaatc caagcaatca
    38341 gggaagactt tgacatccgc gcctacaaaa taggaatgct cggcacggcg gaaatcatcg
    38401 aatgcgttgc cgacaagctg aaacactgtg acttcggcag gcgcgtactc gaccctgtga
    38461 tgattgccaa aggcggtgcg ccgctgttgc aggattccgc cgttgcggca ctgacgcgcc
    38521 tgctgcttcc cgatacggat gtattgaccc ccaacctgcc cgaggcggaa gccctgaccg
    38581 gcgtgcatat cgaaaaccgt aaagatgcgg aacgtgcggc aaaaatcctg cttgattacg
    38641 gtgtcaaaaa tgtcgttatc aaaggcggac atttgaacgg cagcagcagc ggacgctgca
    38701 cggattggct gtttacgcaa aacgaaacgc tggaattgga cagcccgcgc tttccgaccg
    38761 cccacacgca cggcacaggc tgcacgtttt ccgcctgcat taccgctgaa ttggcaaaag
    38821 gctcggacgt ttgcgaagcc gtacagactg ccaaggccta tatcacggcg gcaatctcaa
    38881 accctttgga aatcggcgcg ggacacgggc cggtcaatca ttgggcgtat cgggactaac
    38941 cgtaaaaatg ccgtctgaaa caaaatgttc agacggcatt tttgaagatt attcaggcct
    39001 tttcgccagc atggttacaa atttaaaccg tatcggattg ccgttttcgt ctttggcgtg
    39061 catcgcgccc aattcttctt tatattcgac cagctcccaa tcccgataat aatccttcag
    39121 ttctccctct ttaaatttga aggggaacgg catcgggcag gggaaatccg ccgtatccat
    39181 tgccgataca atcaagttgt acccgcccgc cgccgtatgc gcctgcatat cggcaatcac
    39241 gtcgggtacg cgctgcggca tcaggaacat cagcaccact gttgccacaa tataatcaaa
    39301 ctcgccctgc aaggcggcgg cgttcaaatc atattccagc gtgcggacgt tcaaaccctc
    39361 cgcctctgcc agctccgcca cgtttgccaa ggcggcggga ttgtgatcga ctgcagtaac
    39421 ttcaaacccc ttcaaaccga gaaacagcgc gttgcgcccc tgcccgcagc ccatatcgag
    39481 cgccctgccc gcaggtacga tatcctgagc cgccgccact gcagaatgcg tggcactcat
    39541 gccgtatttt ttgtggaaat aatcttcggc cacacaatac atcgacaaac ggatttcggc
    39601 atcgtccgtt ttcggtttga ccgaaaacac ctgctgcggc gcaaacacgc aatcgccgct
    39661 ttctgccgac caaacctccg ccgccccgtc ctgcgtgcgg acttcgacat cgccctgcaa
    39721 cacattcagg cagacccatt cccctccttc ggacgaatag cccgacaaca aaacttccgg
    39781 caggttttcc gccttccata cgggcatctg tccgaaacaa aacaactcgc cgctttgacc
    39841 cactatccac tccttcatat tcaaaaataa agttgcacat tatatgccta ttttaatccg
    39901 ccgcaatctt tcagacggca cggcgcacaa accgcttata atcacgccgg acaccacaca
    39961 aaggcacaat aatggacaaa accgtttacc tttacaccga cggcgcgtgc aaaggcaatc
    40021 ccggcgcggg cggctggggc gtgttgatgc gctacggcag ccgcgaaaaa gaacttttcg
    40081 gcggcgaagc gcaaaccacc aacaaccgca tggagctgac cgccgtcatc gaaggactga
    40141 aatcgctcaa acgccgctgc accgtcatca tctgcaccga ctcgcaatac gtcaaaaacg
    40201 gcatggaaaa ctggatacac ggttggaagc gcaacggctg gaaaaccgcc gccaaacagc
    40261 ccgtcaaaaa cgacgacttg tggaaagaac tcgacgttct ggttgggcag caccaagtca
    40321 gctggacttg ggttaaagga cacgcgggac acgcggaaaa cgaacgcgcc gacgatttgg
    40381 caaaccgtgg cgcagcgcag ttttcctgac tgccgctccg gcaaaaatgc cgtctgaaac
    40441 cgctaatggg ctttagacgg catcgtcctc caccgtcatt cccgcgcagg cgggaatcca
    40501 aaccgtcggg caacggcaat attcaaaagc cgtctgaaaa tttagaggct ctagattccc
    40561 gcttttgcgg gaatgacgaa aagttgcgga cagcagagga atgacgaggt ttcagacggc
    40621 attgggggct ttgtcgggct tcaggcggca tccgaccgcc ccgtcattcc cgcgaaagcg
    40681 ggaatctaaa aatccaacgc tgcaaaaatt tatttagaaa caactgaaac cgctctgccg
    40741 tcattcccgt gcaggcggga atccagacct tcgggtaacg gcaatattca aaagccgtgt
    40801 gaaaatttaa aaggtctaga ttcccgcttt cacgggaatg acgaagagct gcgggaatga
    40861 cgggatttta ggtttctgat tttgtttttc tgtttttgag ggaatgacgg gatttgagat
    40921 tgcggcattt atcgggagca actgaaaccg ctctaccgtc attcccgcgc aagcgggaat
    40981 ctagaccttc gggtaacggc aatattcaaa agccgtgtga aaatttaaaa ggtctagatt
    41041 cccgctttca cgggaatgac gaaaagttgc aagaatgacg gagtttcagg cggcatccga
    41101 ccgccccgtc attcccgcga aagcgggaat ctaaaaaccc aacgctgcaa gatttatcag
    41161 aaacaactga aaccgaacgg actggattcc cgcctgcgcg ggaatgacgg gattttagta
    41221 accgtagcaa ccgcctgcgc gacggctaag gggcttcagc aaccgtagca actgcctgtg
    41281 tgggaatgac ggacaatggg cttcagacgg catcagacgg catctcttgc ctgccgctaa
    41341 aacagtttgc cgcacaactg ttcaaacgcg tccgatatat ttcaacacac aggacgacac
    41401 ataaagcacc tccctatgtg tcgtcctgat ttggaagggg ttacaccccc tcccaaataa
    41461 agtctgatcc tgccgcccta aagggcgggg tttcaaccga aaaggaaata cgatgaagtg
    41521 gtacaattag cggcaatgcg gacagacaaa ttaaactata gtggattaac aaaaacc
//
LOCUS       DBBZXU010000004        40858 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.004, whole genome shotgun sequence.
ACCESSION   DBBZXU010000004 DBBZXU010000000
VERSION     DBBZXU010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 40858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40858
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.004"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(144..234)
                     /locus_tag="ACJJDE_000181"
     tRNA            complement(144..234)
                     /locus_tag="ACJJDE_000181"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(198..200),aa:Ser,seq:gga)
     gene            complement(273..359)
                     /locus_tag="ACJJDE_000182"
     tRNA            complement(273..359)
                     /locus_tag="ACJJDE_000182"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(323..325),aa:Leu,seq:cag)
     gene            complement(395..481)
                     /locus_tag="ACJJDE_000183"
     tRNA            complement(395..481)
                     /locus_tag="ACJJDE_000183"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Leu,seq:cag)
     gene            570..2945
                     /gene="rnr"
                     /locus_tag="ACJJDE_000184"
     CDS             570..2945
                     /gene="rnr"
                     /locus_tag="ACJJDE_000184"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HGG7540181.1"
                     /translation="MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVP
                     SKIEALVRELSIKEEEYEFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHK
                     DGFGFAVPLTPAKDGDFVLYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQ
                     SKVVGRFYMDRGVAILEPEDKRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRP
                     AVAKIIEVLGDYADSGMEIEIAVRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDL
                     RDLPLVTIDGETARDFDDAVFAEKIGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTS
                     VYFPRRVIPMLPENLSNGICSLNPNVERLCMVCDMVITYAGNIKEYRFYPAVMRSHAR
                     LTYNQVWKWLSDGIGHPFKAQIDTLYKLFKILQKKRFERGAVEFDSIETQMLFDDNGK
                     IEKIVPVVRNDAHKLIEECMLAANVCAADFLLKNKHTALFRNHLGPTPEKLAALREQL
                     GLLGLQLGGGDNPSPKDYAALAGQFKGRPDAELLQVMMLRSMQQAVYEPHCDGHFGLA
                     YEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTPKKSWQALGVHTSFCERRADDASRD
                     VENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDGIHIDGLVHISDLGEDYFNFRPE
                     IMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLIAEGSGRGRKVKSSASAKPAG
                     TAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPVPIKVKKRKGKS"
     gene            complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="ACJJDE_000185"
     CDS             complement(3284..4747)
                     /gene="guaB"
                     /locus_tag="ACJJDE_000185"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003767939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HGG7540182.1"
                     /translation="MRIVEKAYTFDDVLLVPAHSTVLPRDVKLQTKLTREITLNLPLL
                     SAAMDTVTEARLAISMAQEGGIGIIHKNMPPEMQARAVSKVKRHESGVVKDPVTVAPT
                     TLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRFENRVDLPVSAIMTPRERLV
                     TVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILKTTEFPNANKDSEGRL
                     RVGAAVGTGGDTEERVKALVEAGVDVIVVDTAHGHSQGVIDRVKWVKETYPHIQVIGG
                     NIATAKAALDLVAAGADAVKVGIGPGSICTTRIVAGVGVPQLTAIHNVAEALKGTGVP
                     LIADGGIRFSGDIAKALAAGAYSVMLGGMFAGTEEAPGEIELYQGRSYKSYRGMGSLG
                     AMSQGSADRYFQDKTDSTDKYVPEGIEGRVPYKGPIVNIVHQLTGGLRSSMGYLGCAN
                     IAEMHEKAEFVEITSAGMSESHVHDVQITKEAPNYHR"
     gene            complement(4948..5028)
                     /locus_tag="ACJJDE_000186"
                     /pseudo
     CDS             complement(4948..5028)
                     /locus_tag="ACJJDE_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798803.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5074..5535)
                     /locus_tag="ACJJDE_000187"
     CDS             complement(5074..5535)
                     /locus_tag="ACJJDE_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540183.1"
                     /translation="MNIIMDSTRKFGILWEENSECNGFIYGKIQIIIGENIYPKICPY
                     GYFTLNAVFNSLKSSFEEKYYAGGNNGLDFGEQLFDIDKYNSLELCNIFSIDTTYMSG
                     GGNCEIDCLVLEMGYSGEEERLFYSFDNGKNFKEIRYKKGTVESVIFQLNL"
     gene            complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="ACJJDE_000188"
     CDS             complement(5626..8184)
                     /gene="glnD"
                     /locus_tag="ACJJDE_000188"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0018177 - protein uridylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HGG7540184.1"
                     /translation="MPANLSSALETFKRQRDAAEAHYLKANRVSVFFREYTAAVETLL
                     AALWVEHFQNSALCLMAVGGFGRGELYPCSDVDLAVVSPAPLSDGIQEQIARFVQTLW
                     DCKLMPSVKSGSVDELCESVRNDITGDTAFLEARFLFGNRQTVDKLAEKMNAQRNVAA
                     FVEAKLVEMEHRHAKSQGSGAVLEPNIKSCPGGLRDIHTLLWIAKAQGLATDLPDLLK
                     QRILTRAEAGMLSHGYRRLAHIRIHLHLNANRAEDRLLFDLQPQVAESMGYEGLNLRR
                     QSEELMRVFYRAIKTVKQLGGILTPMLQSRVSSTPLRVTLRIDDDYIQVNNQIAARHT
                     DIFFRRPEHIFKIVEIMQQRNDITALEPQTLRAWWGATRKINRSFYQNPENRRRFAGF
                     FRNGNGLTQTLRFLNLYGVLGRYLPAWEKIIGLLQHDLFHIYPVDDHILTVVRNVRRL
                     ALDMHSHELPYASALMQSFEKQDILYLAAFFHDIAKGRGGDHAIQGIADARQFAADHF
                     LTGEESDLLAWLVENHLLMSAVAQKEDIQDPDVLDAFCKRVQTHERLSALYLLTISDI
                     RGTNPKLWNAWRASLLESLFHAAGRYLTGNGGNPHTLFGRRRQEAADLLTRAAVPEKQ
                     QKKLWNALGSAYFARHQSREILWHAANLVHDFETPIVRSRILPQSDSFQVMVFMPNGP
                     RLFARLCRIFSRHGFDILAARAFITEHDYILDTFIVQIPSQHAPEDYPDIQSALEAEL
                     NSFIHGHTVAEISSHSRRISRRSRYMPIAPSITITPEEDYPDWYSVEITAVNRPFLLA
                     DMAEVFFAHNVSLRYAKISTLDERAEDSFTVFSLDLKNPKIQSSLKQTLLEQLS"
     gene            complement(8232..8552)
                     /locus_tag="ACJJDE_000189"
     CDS             complement(8232..8552)
                     /locus_tag="ACJJDE_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7540185.1"
                     /translation="MMGNKLTPPAKLPDEQDLRAVLAYNMRLFRVNKGWSQEELARQC
                     GLDRTYVSAVERKRWNIALSNIEKMAAALGVAAYQLLLPPQERLKLMTNSADTRQMPS
                     ESGI"
     gene            complement(8877..9350)
                     /gene="bfr"
                     /locus_tag="ACJJDE_000190"
     CDS             complement(8877..9350)
                     /gene="bfr"
                     /locus_tag="ACJJDE_000190"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7540186.1"
                     /translation="MKGDRLVIRELNKNLGLLLVTINQYFLHARILKNWGFEELGEHF
                     FKQSIVEMKAADDLIERILFLEGLPNLQELGKLLIGESTEEIIACDLTKEQEKHEALL
                     AAIATAEAQQDYVSRDLLEKQKDTNEEHIDWLETQQELIGKIGLPNYLQTAAQED"
     gene            complement(9378..9842)
                     /gene="bfr"
                     /locus_tag="ACJJDE_000191"
     CDS             complement(9378..9842)
                     /gene="bfr"
                     /locus_tag="ACJJDE_000191"
                     /EC_number="1.16.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004322 - ferroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0008199 - ferric iron binding [Evidence
                     IEA];
                     GO_process: GO:0006879 - intracellular iron ion
                     homeostasis [Evidence IEA];
                     GO_process: GO:0006880 - intracellular sequestering of
                     iron ion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HGG7540187.1"
                     /translation="MQGNQAVLDYMNELLSGELAARDQYFIHSRLYSEWGYTKLFERL
                     NHEMEEETTHAEDFIRRILMLGGTPKMARAELNIGTDVVSCLKADLQTEYEVRDALKK
                     GIKLCEEAQDYVTRDLMVAQLKDTEEDHAHWLEQQLRLIELIGEGNYYQSQL"
     gene            complement(10305..11288)
                     /gene="lipA"
                     /locus_tag="ACJJDE_000192"
     CDS             complement(10305..11288)
                     /gene="lipA"
                     /locus_tag="ACJJDE_000192"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HGG7540188.1"
                     /translation="MSEIKTDDPKRGIKLRGADKTARIPIKVVPLQEKLKKPEWIRAK
                     LPSRKFFEIKDILREQKMHTVCEEASCPNIGECFSKGTATFMIMGDICTRRCPFCDVG
                     HGRPNMLDPDEPKNLAESVKAMNLRYVVITSVDRDDLRDGGAQHFADCIKAIRETSPN
                     TKIEILVPDFRGRLDIALKILAETPPDVMNHNLETHPSLYRKARPGANYQHSLDLLKR
                     YKEMMPHIPTKSGIMVGLGETDEDVREIMRDMRAHNIEMITIGQYLQPSDGHLPVLRY
                     VTPEQFKIFEKEAYELGFSNAAIGAMVRSSYHADEQATEALRESHGGCGHH"
     gene            complement(11281..11904)
                     /gene="lipB"
                     /locus_tag="ACJJDE_000193"
     CDS             complement(11281..11904)
                     /gene="lipB"
                     /locus_tag="ACJJDE_000193"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HGG7540189.1"
                     /translation="MKIIHKGLVEYLPTFEAMKTFNAGRNADTEDELWVVEHPPVFTQ
                     GLVGKPEHLLIRDDIPVVQIDRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALEN
                     SIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTH
                     INPCGYAGMEMTQIADFVQPCPTPDEVAAKLTAHLETQFTPKADNNE"
     gene            complement(11906..12181)
                     /locus_tag="ACJJDE_000194"
     CDS             complement(11906..12181)
                     /locus_tag="ACJJDE_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HGG7540190.1"
                     /translation="MTEQENKTSLIEFPCTFPLKVMGAVHPEFEQAVLDTVRLHAPDT
                     QAHHITTRPSSKGNYTGATVQVKVENQEQLDNIYRALTSHELVKVVL"
     gene            12366..13436
                     /locus_tag="ACJJDE_000195"
     CDS             12366..13436
                     /locus_tag="ACJJDE_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HGG7540191.1"
                     /translation="MYRRKGWGIKPWMGAGAAFAALVWLIFALGDTLTPFAVAAVLAY
                     VLDPLVEWLQKKGLNRASASMSVMVFSLILLLALLLIIVPMLVGQFNNLASRLPQLIS
                     FMQNTLLPWLKNTIGGYMEIDQASIIAWLQAHTGELSNALKAWFPVLMRQGGNIVSSI
                     GNLLLLPLLLYYFLLDWQRWSCGIAKLVPRRFAGAYTRITGNLNEVLGEFLRGQLLVM
                     LIMGLVYGLGLVLVGLDSGFAIGMVAGILVFVPYLGAFTGLLLATVAALLQFGSWNGI
                     LSVWAVFAVGQFLESFFITPKIVGDRIGLSPFWVIFSLMAFGQLMGFVGMLAGLPLAA
                     VTLVLLREGVQKYFAGSFYRGR"
     gene            complement(13683..14630)
                     /locus_tag="ACJJDE_000196"
     CDS             complement(13683..14630)
                     /locus_tag="ACJJDE_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stomatin-like protein"
                     /protein_id="HGG7540192.1"
                     /translation="MEFFIILLVAVAVFGFKSFVVIPQQEVHVVERLGRFHRALTAGL
                     NILIPFIDRVAYRHSLKEIPLDVPSQVCITRDNTQLTVDGIIYFQVTDPKLASYGSSN
                     YIMAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVSALDEAAGAWGVKVLRYEIKD
                     LVPPQEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAV
                     NASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVA
                     AFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK"
     gene            complement(14645..15052)
                     /locus_tag="ACJJDE_000197"
     CDS             complement(14645..15052)
                     /locus_tag="ACJJDE_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HGG7540193.1"
                     /translation="MTVWFVAAVAVLIIELLTGTVYLLVVSAALAGSGIAYGLTGSTP
                     AAVLTAALLSALGIWFVHAKTAVGKVETDSYQDLDAGQYAEILRHAGGNRYEVFYRGT
                     HWQAQNTGQDVFEPGTRALIVRKEGNLLIITHP"
     gene            15133..15792
                     /gene="ung"
                     /locus_tag="ACJJDE_000198"
     CDS             15133..15792
                     /gene="ung"
                     /locus_tag="ACJJDE_000198"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HGG7540194.1"
                     /translation="MDTWHDALGNEKRQPYFQEILNAVRQERLSGQIIYPPAEDVFNA
                     FRLTAFDRVKVVILGQDPYHGAGQAHGLAFSVRQGVRIPPSLLNIYKELETDINGFSI
                     PDHGCLTAWAEQGVLLLNTVLTVRAGQAHSHALLGWERFTDTVIRQLAAHRKHLVFML
                     WGGYAQQKGRLIDSQNHLILTAPHPSPLSAYRGFFGCRHFSQANSYLSQHGIEPINWK
                     L"
     gene            15953..16351
                     /locus_tag="ACJJDE_000199"
     CDS             15953..16351
                     /locus_tag="ACJJDE_000199"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7540195.1"
                     /translation="MIDVTDFNDEDKLGKGKEMIDRLSRLVGIFKKLNLSSNQAEDDD
                     LLGDAYEYLMRHFATESGKSKGQFYTPAEVSRIMAKIIGISADCRPAPAFMTRPAARV
                     RCCSKPPPKPAAKSAFTVRKKMWQPRPLPV"
     gene            16264..16897
                     /locus_tag="ACJJDE_000200"
                     /pseudo
     CDS             16264..16897
                     /locus_tag="ACJJDE_000200"
                     /inference="COORDINATES: protein motif:HMM:NF014442.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
     gene            17245..18189
                     /locus_tag="ACJJDE_000201"
     CDS             17245..18189
                     /locus_tag="ACJJDE_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7540196.1"
                     /translation="MAHPDYAAFKAGHLAKFAAWHTQNDLAAIQPGRLIRKWSESLLD
                     AFKPGSLIEEYDFYQILTDYWAETLQDDVYLIAQDGWKAVKNLAEITKESDEAANLTV
                     VFEETETDKKGKAKTKRISKKYRSEVIAPELVARRYFSDGIAKLEEKQSELERLSQEL
                     ENHIEEHGGEEGALNDVLDAKGKLSAKLLKTALEESGIEEGERAVLQTTQTLMTQEKA
                     AKDAVKTQIEALNLAVFKQFGRLSEAEIKQLAVQDKWLADLQSRIENRLENSIQQLIS
                     RLNTLEDRYRSPMAELAREVEKWQSKVNAHLENMGFGG"
     gene            18340..18465
                     /locus_tag="ACJJDE_000202"
     CDS             18340..18465
                     /locus_tag="ACJJDE_000202"
                     /inference="COORDINATES: protein motif:HMM:NF013980.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540197.1"
                     /translation="MLERHRNARFMAHMDNFLPNWQSIKQQLNALELFAQIYNLT"
     gene            complement(18755..19270)
                     /locus_tag="ACJJDE_000203"
     CDS             complement(18755..19270)
                     /locus_tag="ACJJDE_000203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540198.1"
                     /translation="MKSKLPLILINFSLISSPLGANAAKIYTCTINGETVYTTKPSKS
                     CHSTDLPPIGNYSSERYIPPQTPEPVSSPSNGGQVVKYKAPVKTVSKPAKSNTPPPQQ
                     APSNNSRRSILEAELSNERKALTEAQKMLSQARLAKGGNINHQEINALQSNVLDRQQN
                     IQALQRELGRM"
     gene            complement(19736..21658)
                     /locus_tag="ACJJDE_000204"
     CDS             complement(19736..21658)
                     /locus_tag="ACJJDE_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7540199.1"
                     /translation="MIEIKNLTLQRGLKVLLDKANATVNPGQRVGLIGKNGTGKSSLF
                     ALIKGEITQDGGDVSIPKNWRLASVSQETPDLDISALDYVLQGDAELQTLQTALRQAE
                     AQNDGMKQAEYHAKLEEIDAYTAPARAAKLLNGLGFSQEEHSRPVKSFSGGWRMRLNL
                     AQALICRADLLLLDEPTNHLDLETVLWLENHLASLPCTQIIISHDRDFLNAATTQTIE
                     LSQQKLTQYGGNYDFYQNERAQRLAQQQAAYVKQQAQIKHLQSFIDRFKAKATKAVQA
                     QSRMKALAKLERIAPAHLDSEFSFEFYNPEHLPNPLLKLEHADLGYEGKTVLHDITLS
                     LESGARYGLLGVNGSGKSTFIKALAGKIDLLSGSIVRSEKLNIGYFAQHQLDTIRADQ
                     NPVWHIQQLSPEVREQEIRNFLGGFNFVGDMALQKTEPFSGGEKARLALAMIIWQKPN
                     LLLLDEPTNHLDLDMRHALTLALQSFQGALIIVSHDRSLLEATTDSFLLIDKGRLKNF
                     DGDLNDYRQWRLAQENAAAAPAASAQSQSRKDTKRIEAQIRQEKARRGKPIQQKIDRA
                     EKEMAQLSEIQTACEAFLAQEDAYLEANKEKLQNTLSQLAKVKTQLAQIEEVWLACQE
                     ELERIETEIEKQFAER"
     gene            complement(21735..22106)
                     /locus_tag="ACJJDE_000205"
     CDS             complement(21735..22106)
                     /locus_tag="ACJJDE_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mth938-like domain-containing protein"
                     /protein_id="HGG7540200.1"
                     /translation="MLFEENPIDGQFAEYECGAGGIRLAGQSFHKPVLVHKDSVCLSQ
                     CRTLSDLTPENLLSDIKPVDYLEILIIGTGAAQEFIHPKIMADFSRIGIGVECMNTDS
                     AFRTLVFLHSEGRRAWAWLQP"
     gene            22303..23610
                     /locus_tag="ACJJDE_000206"
     CDS             22303..23610
                     /locus_tag="ACJJDE_000206"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HGG7540201.1"
                     /translation="MKPVNIGLLGLGTVGGGTAAVLRDNAEEISRRLGREVRISAVCD
                     LSEEKARQICPSAAFVKDPFELVARKDVDVVVELFGGTGIAKDAVLKAIENGKHIVTA
                     NKKLLAEYGNEIFPLAEEKNVMVQFEAAVAGGIPIIKALREGLAANRIKSIAGIINGT
                     SNFILSEMREKGSAFADVLKEAQALGYAEADPTFDIEGNDAGHKITIMSALAFGTPMN
                     FSACYLEGISKLDSRDIKYAEELGYRIKLLGITRKTGKGIELRVHPTLIPESRLLANV
                     NGVMNAVRVNADMVGETLYYGAGAGALPTASAVVADIIDIARLVEADTAHRVPHLAFQ
                     PAQVQAQTILPMDEITSSYYLRVQAKDEPGTLGQIAALLAQENVSIEALIQKGVIDQT
                     TAEIVILTHSTVEKHIKSAIAAIEALDCVEKPITMIRMESLHD"
     gene            23603..24037
                     /locus_tag="ACJJDE_000207"
     CDS             23603..24037
                     /locus_tag="ACJJDE_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540202.1"
                     /translation="MTEPKHEMPTEEQVAARKKAKAKIRTIRIWAWVILALLASTALL
                     SQCAMSKPQAKQKIVESCVKNIPFAEKWQNDLRARGLDSNNTRLTVDYCKCMWEQPLD
                     RLSEKQISSFGKLGAQEQLDLLGGANAFETRDKQCVADLKSE"
     gene            complement(24096..24365)
                     /locus_tag="ACJJDE_000208"
     CDS             complement(24096..24365)
                     /locus_tag="ACJJDE_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HGG7540203.1"
                     /translation="MNKSELIEAIAQEADISKAAAQKALDATTNAVTTALKQGDTVTL
                     VGFGTFYVGERAERQGRNPKTGEPLTIAAAKTPKFRAGKALKDAL"
     gene            complement(24547..27009)
                     /gene="lon"
                     /locus_tag="ACJJDE_000209"
     CDS             complement(24547..27009)
                     /gene="lon"
                     /locus_tag="ACJJDE_000209"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HGG7540204.1"
                     /translation="MTQKEKHFEEYAALATLPLRDVVVYPHMVLPLFVGRPKSIAALE
                     NAITREEPVFLLAQTDAALEEPVAADLYQTGTVAQVLQVLKLPDGTVKVLVEGLYRGR
                     VLTIEDTGGLFVSHIEAVVEEDTGGNTDLEAVRRTLLAQFEQYAKLNKKIPAEIIGSI
                     NGIAENSRLTDTVAAHLQLKLAQRQQILEIPEIGKRMEFLLAQLESELDIMQAEKRIR
                     GRVKRQMEKSQREYYLNEQIKAIHKELGEEDENGELDALEAGIKKAGMSKEAEEKCLS
                     ELKKLKMMPPMSAESTVVRNYIDTLLELPWKKKSRVSKDIAKAGLVLDTDHYGLEKVK
                     ERILEYLAVQKRMDKLKGPILCLVGPPGVGKTSLGESIAKATGRKYVRMALGGVRDES
                     EIRGHRRTYIGSMPGKILQNMAKAGVKNPLFLLDEIDKLGSDFRGDPASALLEVLDPE
                     QNNKFADHYAEVDYDLSDVMFIATSNSLNIPTPLLDRMEIIRLSGYTEDEKINIAMQY
                     LVPKQMKRNGVKEGELLVEESAVRDIIRYYTREAGVRSLDREIAKICRKVVMQITLDE
                     DKKRLSETKKTSKAKPKAVKVNEKNLHDYLGVRRFDYGVAESENRIGQVTGLAWTEVG
                     GELLTVEAAALPGKGVIQCTGQLGDVMKESVSAAWSVVRSRAESVGLASDFYEKKDIH
                     VHVPEGATPKDGPSAGIAMTLAMVSAFSKIPVRADVAMTGEITLRGEVLPIGGLKEKL
                     LAALRGGIKHVLIPKDNFKDLEEIPENVKTGLTIHPVKWIDEVLALGLESQPEPWAEP
                     SGAEAVAESASKPKPRSRATKH"
     gene            27260..28363
                     /locus_tag="ACJJDE_000210"
     CDS             27260..28363
                     /locus_tag="ACJJDE_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7540205.1"
                     /translation="MSSFIFPDNGAEWRNESVQKPPKGWHYVRESGADGILKAAYQNI
                     ATVWQGDFHNAKQVLSAMKKRARKPAAVRSDADIAALFHAHRMKQAQQSRILNMLAVE
                     IRPGFVLDNKRAPDIRAALLDVYGEADGKPFFLPLNLLLGFMGAHEWHKKGVAVPQLG
                     GSIHVPFGVFSPLRGEYLDLLAHAPSTGFQTAFDIGTGSGVLAAILAKQGIPSVIGTD
                     TNPKAVACARANIARLGFEKQVEIRETDLFPEGFADLIVCNPPWLPAKPTSAVESALY
                     DPESAMLAAFLRDAPKHLNPDGEIRLIISDLAEHLGLRPADFLEKAFIRAGLRVADMM
                     KTKPKHKKAANPSDPLAFARTRETTFLYRLKKA"
     gene            complement(28391..30136)
                     /gene="recD"
                     /locus_tag="ACJJDE_000211"
     CDS             complement(28391..30136)
                     /gene="recD"
                     /locus_tag="ACJJDE_000211"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HGG7540206.1"
                     /translation="MERQTDEFAQAAARAAIWFLARYAGSGSEVLANCTERLFQALQN
                     GHSFIRLSGGEADALSALAPVVGTSAAPLILEGRRLFLGRMWQLEYDLAAEIKRLAAA
                     GTSAPDAAGARQNLAKWFQGTGSEGQRDAAALALLQSFMVITGGPGTGKTTTVAKLLA
                     LICGEDENLPNIALAAPTGKAAAHMARALHRAINGFDAPEAIRRHLLKLEGQTVHRLL
                     KLRPPKMQAAFNPVYPLPLDVLVIDEASMLDTALMLQLLKAVKTGARVILLGDENQLP
                     SVGIGAVLSVLSHKTVLDGETHQRLAGFLPEHGFSVSANPPVLAQNTAHLSFSHRFGD
                     NSGIGCLARAAVSGDEGAWALFDRFPDELEHSECSPNARVERLYRAHKAYWQAVKDGN
                     IEAAYAGISDIVVLAAWRQDAEDFNEAYCSHVRRKMNIPEHQAYFAGEPIMIRQNDYA
                     LELFNGDIGLIMEDVGRQGSLAAYFADADGFKKVAVSCLPDFEPAFAMTVHKSQGSEY
                     REVWLLPPSAAPSDEGDDALSGLSKELLYTAITRAREKFVFFGGEETFRQAAATVKTR
                     QTALGSMLERVFSQE"
     gene            complement(30204..30899)
                     /gene="lolD"
                     /locus_tag="ACJJDE_000212"
     CDS             complement(30204..30899)
                     /gene="lolD"
                     /locus_tag="ACJJDE_000212"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HGG7540207.1"
                     /translation="MSELILKCEGVGKRYRDGGLDVRVLHGLDLEILAGESTGIIGSS
                     GSGKSTLLHILGGLDMPSEGRVLLMGEDLRTLSQRQLGILRNRHLGFVYQFHHLLPEF
                     SALENVMMPLLIGKKKREEAAETAMAMLEKVGLKHRSAHRAGELSGGERQRAAIARAL
                     VTQPKCLLADEPTGNLDRANARNVLDMMLELKTELGTGLVVVTHDDELAGRFERVMVM
                     KDGSLHPKQGANA"
     gene            complement(30892..32139)
                     /locus_tag="ACJJDE_000213"
     CDS             complement(30892..32139)
                     /locus_tag="ACJJDE_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HGG7540208.1"
                     /translation="MFSLEAWIGLRYLRAKKRNGFMSFITMVSIAGIALGVTALIVVL
                     SVMNGFQKEIRGQLLNVAPHAEIGYIDNTDTDWRNLLRFTENRKGILAAAPYVSNQAL
                     LANAGEIRGVQMRGILPSEERKVVEYGDKMPAGKFEDLIPGEFDIILGVGLAEALGAE
                     VGNKVTVITPEGNVTPAGVVPRLKQFTVVGLVKTGVYEVDNSLAMTHIQDARVLYRLD
                     KEVAGLRLKLADPQNAPALTAKLIPEAQRDTVWVRDWTFSNRSYFEAVELEKRMMFII
                     LTLIIAVAAFNLVSSLVMAVTEKQADIAILRTLGLSPAGVMKIFMVQGAFSGFFGTLA
                     GVVCGVLLGWNVGRVVAFFENLLGVHLINSQVYFIDYLPSDVDMGDVALIACISLGLS
                     FVATLYPSWRASKTQPAEALRYE"
     gene            32344..32622
                     /locus_tag="ACJJDE_000214"
     CDS             32344..32622
                     /locus_tag="ACJJDE_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540209.1"
                     /translation="MNIRTAFALCAIALSAAAAAYAKEIKIDANNTPYSEADAQKLAA
                     TAVGMGVKEPISLNGGSGSITVSGSSATQCVFKVGNGGALQIQGLNCK"
     gene            complement(32678..33295)
                     /gene="recR"
                     /locus_tag="ACJJDE_000215"
     CDS             complement(32678..33295)
                     /gene="recR"
                     /locus_tag="ACJJDE_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HGG7540210.1"
                     /translation="MSHKKQDAFQGLIDALKVLPNVGPKSAQRIAYHLLQHKRKEAEK
                     LVDALQTALKQVHHCAMCNTFCEGGLCDICADETRDGRRLMVVHMPADVSNMEVANCH
                     DGLYFVLMGQINTALGMDVSAIALDRLAQRLGGGEVEEIIIATAFTAEGNATAYVLSE
                     FFKNLPYKVSRLSQGIPLGGELEYVDAGTLAQAVYERRLIKEGGA"
     gene            complement(33362..34900)
                     /locus_tag="ACJJDE_000216"
     CDS             complement(33362..34900)
                     /locus_tag="ACJJDE_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HGG7540211.1"
                     /translation="MFHSIEKYRTPAQVLLGLIALTFVGFGVSTVSHPGADYIVQVGD
                     EKISDHSINNAIQNEQADGGGPSRDAVFQSLLQRAYLKQGAKLLGISVSSEQIKQIIV
                     DDPNFHDANGKFDHALLNRYLSQRHMSEDQFVEEIRDQFALQNLVNLVQNGVLVGDAQ
                     AEQLIRLTQVNRTIRSHTFNPDEFIAQVKVSEADLQKFYNANKKDYLLPQAVKLEYVA
                     LNLKDFADKQTVSETEVKNAFEERVARLPANEAKLSFEQEKAAVENELKMKKAVADFN
                     KAKEKLSDDAFNHPASLAEAAKNSSLKVETQETWLSRQDAQMSGLPENLINAIFSDDV
                     LKKKHNSEVLSINNEIAWVVRAKEVREEKTLPFAEAKDAVRQAYIRAEAAKLAENKAK
                     DVLTQLNGGKAVDVKWSEVSVLGAQQARQSMPPEAYAELLKAKPTNGKPAYVRLTGLP
                     APVIVEVQAITPPDDIAAQLPLAKQALAQQQSANTFDLLIRYFNGKIKQTKGAQSVDN
                     GGGQ"
     gene            complement(34954..35328)
                     /locus_tag="ACJJDE_000217"
     CDS             complement(34954..35328)
                     /locus_tag="ACJJDE_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase"
                     /protein_id="HGG7540212.1"
                     /translation="MIVLHGIPNCDTVKKAKNRLAGYGLEFEFRDFKKQMPSEAEICS
                     WLEQVPLETLLNKRGTSWRKLDAETQQKALSSTAEAVKLMSEMPSLIKRPVLECGGKV
                     YAGFSEETYDGIFNRQAPCRQG"
     gene            35478..37106
                     /locus_tag="ACJJDE_000218"
     CDS             35478..37106
                     /locus_tag="ACJJDE_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HGG7540213.1"
                     /translation="MISTNGITMQFGAKPLFENVSVKFGEGSRYGLIGANGSGKSTFM
                     KILGGDLEQTAGEVAIENGVRLGKLRQDQFAYEDMRVLDVVMMGHTEMWAAMTERDAI
                     YANPEATEDDYMKAAELEAKFAEYDGYTAEARAAELLSGVGISEDLHNAKMAEVAPGF
                     KLRVLLAQALFSKPDVLLLDEPTNNLDINTIRWLEGVLNQYDSTMIIISHDRHFLNEV
                     CTHMADLDYNTITIYPGNYDDYMLASAQSRERALKDNAKAKEKLQELQEFVARFSANK
                     SKARQATSRLKQADKIKSEMVEVKPSTRQNPYIRFEADEKAKLHRQAVEVEKLAKRFE
                     TQLFKNLNFILEAGQRLAIIGPNGAGKSTLLKLLAGAYNPEYSDGLLPDEGSIKWAEK
                     ASVGYYPQDHENDFDVDMDLSEWMRQWGQEGDDEQVIRGTLGRLLFGSNDVVKKVKVL
                     SGGEKGRMLYGKLLLLKPNVLVMDEPTNHMDMESIESLNMALEKYNGTLIFVSHDRQF
                     VSSLATQIIELDGKGGYEHYLGDYESYLEKKGVA"
     gene            37191..38444
                     /locus_tag="ACJJDE_000219"
     CDS             37191..38444
                     /locus_tag="ACJJDE_000219"
                     /EC_number="2.7.7.72"
                     /EC_number="3.1.3.-"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004810 - CCA tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0001680 - tRNA 3'-terminal CCA addition
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional CCA addition/repair protein"
                     /protein_id="HGG7540214.1"
                     /translation="MQTYLVGGAVRDYLLGLPVKDRDWVVVGADAQTMLAQGFQPVGK
                     DFPVFLHPETHEEYALARTERKTAKGYAGFSFHTDKDVTLEQDLMRRDLTINAMAQDA
                     DGKIIDPFGGQRDLAAGILRHVSPAFAEDPVRILRTARFAARYKFEIAEETIKLMRQM
                     VENGEADALVAERVWQEFAKGLMEKNPRKMIEVLRECGALKVLLPEVNALFGVPQRAD
                     YHPEIDSGIHTLMTLQRAADMGLSLPERYAALLHDLGKAKTPSDILPRHHGHDLAGVE
                     PVREVNQRLRAPKHCAELAELVCRWHIIFHQVGQLKSQTILNVLKKTDAFRRPERFQT
                     ALNVCIADTQGRLNREHTPYPQRAHWLALLEAANQADSGKIAAECRSQGKAHLIAEQI
                     DRARLAQIAPLQKAFRAAQDKTEKH"
     gene            38667..38975
                     /locus_tag="ACJJDE_000220"
     CDS             38667..38975
                     /locus_tag="ACJJDE_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540215.1"
                     /translation="MTLKTDLLPKINNEDYQRLILKHSAEFSGGEIRLLNEILEKFNF
                     DVVQAQALAQAVMQQVRFDPNAYHIDSDDEDTTGICPHCINPPMPPLRDYLVWRETRG
                     "
     gene            39057..40088
                     /gene="ruvB"
                     /locus_tag="ACJJDE_000221"
     CDS             39057..40088
                     /gene="ruvB"
                     /locus_tag="ACJJDE_000221"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HGG7540216.1"
                     /translation="MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQH
                     KAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLER
                     AGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
                     LPPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYENRDLATIVSRSAQLLQLDMSEEGA
                     EEIAKRSRGTPRIANRLLRRVRDFADVKNNGTIDGGIADAALSMLDVDVQGLDVMDRK
                     FLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAY
                     LHFGLPVEK"
     gene            complement(40111..40839)
                     /gene="rpe"
                     /locus_tag="ACJJDE_000222"
     CDS             complement(40111..40839)
                     /gene="rpe"
                     /locus_tag="ACJJDE_000222"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HGG7540217.1"
                     /translation="MTTYRIAPSILSADFARLGEEVESVIAAGADLIHFDVMDNHYVP
                     NLTFGPMVCAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
                     SLIRDMGCQAGLVLNPATPVYLLENVLDRLDMVLLMSVNPGFGGQSFIPHTLEKIRRV
                     RAMLDRYEAQSGRHIAIEVDGGIKTDNIAAVARAGADTFVAGSAIFGKPDYKAVIDAM
                     RAELEKSGRLNLAPMIEIEMPSEN"
BASE COUNT         9321 a        10662 c        10878 g         9997 t
ORIGIN      
        1 ataccacaaa acataccata aaaaaacggt aacggatagt tgtaagcggt tgatgacgat
       61 tatagacaat aacgggtttt cccaatgaaa ttattgtttg aataataaaa aatcccaaac
      121 cgtaaaagtt tgggatttgt atttggcaga gaggaaggga ttcgaaccct cgatacgcta
      181 ttcacgtata cacgctttcc aggcgtgcga cttaaaccac tcatccacct ctctaatggc
      241 ggaaattatc ccaatcggga taatttatta tttggtgccc gggagaagac tcgaacttcc
      301 acacccgtga ggataccagc acctgaagct ggcgcgtcta ccaattccgc cacccgggca
      361 atctaaatat tgaaataaag caaagcattt gatttggtgc ccgggagaag actcgaactt
      421 ccacacccgt gaggatacta gcacctgaag ctagcgcgtc taccaattcc gccacccggg
      481 ctttgcttta tttgctgttt tgcggtacag tgtcctgccg caaagaagtc gctattatat
      541 agttcataaa gagaatgtca acagtccaaa tgaataaaaa tattaaatct ttaaatttac
      601 gggaaaaaga cccgttttta agtcgtgaaa aacagcgtta tgaacatcct ttgcccagtc
      661 gggaatggat aatcgagctg cttgaacgta aaggcgtacc atccaagatt gaagctttgg
      721 tacgcgaatt gtcgattaag gaagaagagt acgaattttt cgaacgtcgt ctgaaggcga
      781 tggcgcggga cggtcaggtt ttaatcaacc gtcggggcgc ggtttgcgcg gcggacaaat
      841 tggatttggt caaatgccgt gtcgaggcgc acaaagacgg cttcggtttc gccgtgccgc
      901 tcacgcccgc caaagacggt gattttgttt tgtacgaacg ccagatgcgc ggcattatgc
      961 acggcgatat tgtcactgtt cgtcctgccg gcatggaccg taggggccgc cgcgaaggga
     1021 cggttctgga tattgtcgaa cgcgcgcaaa gcaaagttgt cggccgtttc tatatggata
     1081 ggggcgtggc gattttggag ccggaagaca agcgtctgaa ccaaagcatc gtattggaac
     1141 cggacggcgt ggcgcgtttc aaacctgaat ccggtcaggt catcgtcggc gaaattgagg
     1201 tttatcctga gcaaaaccgg ccggcagtgg caaaaatcat cgaagttttg ggcgattatg
     1261 ccgacagcgg catggagatt gaaattgccg tgcgcaagca tcatttgccg caccaattca
     1321 gtgaagcgtg tgccaaagcc gcgaaaaaaa ttcccgacca tgtacgcaaa agcgatttga
     1381 aaggccgcgt cgatttgcgc gatttgcctt tggtaacgat agacggcgaa acggcgcgcg
     1441 attttgacga tgccgtgttt gccgaaaaaa tcggacgcaa ttaccgtctg gtcgtggcga
     1501 ttgccgatgt cagccattat gtccgccccg atgacgctat cgacacggac gctcaggaac
     1561 gcagcaccag tgtttacttc ccgcgccgcg tgattcccat gttgccggaa aacctgtcca
     1621 acggcatctg ctcgctcaat cctaatgtcg agcgtttgtg tatggtgtgc gatatggtca
     1681 tcacttacgc gggcaatatt aaagaatacc gcttctaccc cgccgtgatg cgctctcatg
     1741 cccgcctgac ctacaaccaa gtttggaaat ggctttcaga cggcatcggg catccgttca
     1801 aagcacaaat cgacacgctt tacaaactct tcaaaatcct tcagaaaaag cgtttcgaac
     1861 gcggggcggt ggagtttgac agcatcgaaa cccaaatgct tttcgacgac aacggtaaaa
     1921 ttgaaaaaat cgtccccgtt gtccgcaacg atgcccacaa gctgattgaa gaatgtatgt
     1981 tggcggcaaa cgtttgcgca gcggattttc tgttgaaaaa caagcatacc gcattgttcc
     2041 gcaaccattt ggggcccacg cccgaaaaac tcgccgcctt gcgcgagcag ctcggtctgt
     2101 tggggcttca acttggcggc ggcgacaacc cgtcgccgaa agactatgcc gcgcttgccg
     2161 gacagttcaa aggcaggccg gatgccgaat tgctgcaagt catgatgttg cgctccatgc
     2221 aacaggcggt ttacgaaccg cattgcgacg gacactttgg tcttgcctac gaagcatacg
     2281 cccacttcac ctcgcccatc cgccgctatc ccgacctgac cgtacaccgc gccatcaaag
     2341 ccgtgttgaa tcagcaaacc tacacgccaa aaaaaagctg gcaggctttg ggcgtgcata
     2401 cctcgttctg tgagcgccgt gccgacgacg ccagccgcga cgtggaaaac tggctgaaaa
     2461 cctattatat gcgcgataag gtcggcgaag tattcgaagg taaaatctcc ggcatgacca
     2521 gttttggtat ctttgtaaca ctggacggca tccacattga cggcttggtg catatcagcg
     2581 atttgggcga agactatttc aacttccgcc ccgaaatcat ggcaatcgaa ggcgaacgca
     2641 gcggcatccg tttcaacatg ggggacaggg ttgccgtccg ggtcgcccgt gccgatttgg
     2701 atgatggaaa aatcgatttt gtcctgattg ccgaggggag cggcaggggg cggaaagtta
     2761 aatcatccgc gtctgccaaa ccggcaggga cggcggggaa agggaaaccg aaaaccgccg
     2821 ccgagaaaaa aacagcccga ggcggcaaag taaggggaag gggcgcgtct gccgccgcag
     2881 aatcggggaa aaaggcaaag aaaccggttc cgattaaggt aaaaaaacgg aaaggcaaat
     2941 cataatgctg acggggtggc ttggggaggg cggggcatac tttcccgaag ccgccgcccg
     3001 attttttgat atggcggccg gcgcatcatt tcaggccaat cgaaacgccc gtattgaaag
     3061 attgcgttta tttccaccgc cgttttaaag gccggcggta ttcggcagac ggggcgcaaa
     3121 cggcgttcag acggcatttt cattctttcg gcgtgtccgt ccgaatggct ttgcccgtcc
     3181 gcgcaatcag cccgtgcggc ttgccttgaa cggacaaaaa atgccgtctg aaacccgaaa
     3241 atcaggtttc agacggcatt ttgccttgaa aaggctgttc aaatcagcgg tggtagttcg
     3301 gtgcttcttt agtgatttga acgtcgtgaa cgtgcgattc gctcatacct gcggaagtga
     3361 tttccacaaa ttcggctttt tcgtgcattt cggcaatatt ggcgcaaccc aagtaaccca
     3421 tactggaacg cagaccgccg gtcagctggt ggacgatgtt cacaatcggg cctttgtaag
     3481 gaacgcggcc ttcgatgcct tcggggacgt atttgtcggt gctgtcggtt ttgtcttgga
     3541 agtagcggtc ggcagaacct tggctcatcg cgcccaatga acccataccg cgataggatt
     3601 tgtacgagcg gccttgatag agttcgattt cgcccggcgc ttcttccgtg ccggcaaaca
     3661 taccgccgag catgacgctg tacgcgcctg cggcgagggc tttggcgatg tcgccggaga
     3721 agcggatgcc gccgtcggca atcaggggaa cgcctgtgcc tttgagggct tcggcaacgt
     3781 tgtggatggc ggtcagttgc ggcacgccca cgcctgccac gatacgggtg gtgcaaatcg
     3841 atcccgggcc gataccgact ttgacggcat ccgcaccggc ggcgaccaaa tccaatgcgg
     3901 ctttggcagt ggcgatgttg ccgccgatga cttggatgtg cggataggtt tctttcaccc
     3961 atttcacgcg gtcaatcacg ccttggctgt gcccgtgggc agtatcgacg acaatcacgt
     4021 ccacgccggc ttcgaccaag gctttgacgc gctcttcggt atcgccgccg gtgccgactg
     4081 ccgcaccgac gcgcagacgg ccttcggagt ctttgttggc gttgggaaac tcggtggttt
     4141 ttaaaatatc tttaacggta atcagacctt tgagttcgtc tttttcgttc agaaccaaaa
     4201 cgcgctcgac tttgtgcgtg tgcatcagtt cgcgcgcttc gtctatgctt gtgccttcgg
     4261 ggacggtaac caaacgttcg cgcggggtca taatggcgga aacgggcaaa tcgacgcggt
     4321 tttcaaaacg caggtcgcgg ttggttacga tgccgacgac tttgccgttt tcaacgacgg
     4381 gcaggccgga cattttgcgt ttgcgctgcg cacgcatttc caagacttcg cggatgagcg
     4441 tcgtcggtgc aacggttacg gggtctttga ccacgccgct ttcgtggcgt ttcactttgg
     4501 aaacggcgcg cgcctgcatt tcgggcggca tgtttttatg gatgatgccg atgccgcctt
     4561 cctgtgccat cgaaatggcg aggcgcgcct cggtaacagt gtccatcgca gcggaaagca
     4621 gggggaggtt gagtgtgatt tcgcgggtga gcttggtttg aagtttaacg tctcgcggca
     4681 gcacggtcga atgtgcggga accaacaaaa catcgtcgaa agtataggct ttttctacga
     4741 tacgcataat gctcggtctt tcagtttgtg caagatgcac ggcattatag cacgttaccg
     4801 gcggcttgac agtttatcag gtttaatttt ggtccccttt gaatagcccg gttttccttt
     4861 gccgaccact gttgctcccg ttctttcaat ttcaggaaaa gcttttttct aatttttggt
     4921 aagtggctca gttattgaag ccctatatcg ggcggtaact tccagcacaa aaaaacggag
     4981 tagttcttta tttatttttt cctttaattt tcagtatatt atcttaatat ttcgagggta
     5041 acatatctgc taatctagtt acagccccat atattataga ttcaattgaa aaataacaga
     5101 ttcaactgta cctttcttat acctgatttc tttaaagttt ttcccattgt caaaactata
     5161 aaaaagtctc tcttcctcac cagaatatcc catttctaat actaaacaat ctatttcaca
     5221 attaccccct ccactcatat atgtagtatc aatagaaaat atattgcata attccagaga
     5281 attatattta tctatatcaa atagttgctc tccaaaatct aaaccattgt ttccacctgc
     5341 ataatacttc tcttcaaagg atgacttcaa actattaaaa actgcattta gcgtaaaata
     5401 tccatatggg catatcttag gatatatatt ctctcctatt attatctgaa tttttccata
     5461 aataaaacca ttacattcag agttttcttc ccataaaatc ccaaattttc ttgttgagtc
     5521 cataataata ttcatataaa tccttatatt aataaattat ttacaatatc ccccgctttc
     5581 agacggcata cggcgtggcg gcggaatgcc gtctgaaggc gggcgttatg ataattgttc
     5641 cagcagcgtc tgcttcaatg aggactggat ttttgggttt ttcaggtcta ggctaaaaac
     5701 ggtaaaactg tcttcggcgc gttcatccag tgtggagatt ttggcatagc gcaggctgac
     5761 gttgtgggcg aaaaagactt ccgccatatc ggcgagcagg aaggggcggt tgacggcggt
     5821 gatttcgacg gagtaccaat cggggtagtc ttcttcgggg gtgatggtga tgcttggcgc
     5881 gatcggcata tagcggctgc ggcggctgat gcggcggcta tggctggaga tttcggcaac
     5941 ggtgtgtccg tggataaagc tgttgagttc ggcttcgagc gcgctttgaa tgtcggggta
     6001 gtcttcggga gcgtgctgcg aggggatttg cacgatgaag gtgtcgagga tgtagtcgtg
     6061 ttcggtgatg aaggcgcggg cggcgagaat gtcgaagccg tggcggctga agatgcggca
     6121 gaggcgggcg aacaggcgcg ggccgttggg cataaagacc atcacttgga agctgtcgct
     6181 ttggggcagg atgcggctgc ggacgatggg ggtttcaaaa tcgtgtacga ggttggcggc
     6241 gtgccacagg atttcgcggg actggtggcg ggcgaagtag gcggaaccga gcgcgttcca
     6301 tagttttttc tgctgttttt cggggacggc ggcgcgggtg agtaagtcgg cggcttcctg
     6361 ccggcggcgg ccgaagaggg tgtgcgggtt gccgccgttg cctgtaaggt agcgtccggc
     6421 ggcatggaag aggctttcca gcaggctggc gcgccatgcg ttccacagct tgggattggt
     6481 accgcgtatg tcggaaatgg tcagaaggta gagcgcgctg aggcgttcgt gggtttggac
     6541 gcgtttgcag aaagcatcga gtacgtcggg gtcttggatg tcttcttttt gggcgacggc
     6601 agacatcagc aggtggtttt cgaccagcca agcgagcagg tcgctttctt ctccggtcag
     6661 gaagtggtca gcggcaaatt ggcgcgcgtc tgcgatgcct tgtatggcat ggtcgccgcc
     6721 gcgtcctttg gcgatgtcat ggaaaaaggc ggcaaggtag aggatgtctt gtttttcaaa
     6781 ggactgcatc agtgcagagg cgtagggcag ctcgtggctg tgcatatcca aggcaaggcg
     6841 gcggacgttg cggacgacgg tgaggatgtg gtcgtccacg ggatagatgt ggaacaggtc
     6901 gtgttggagc aggccgatga ttttttccca cgcgggcagg tagcggccca acacgccgta
     6961 gaggttgaga aagcgcaggg tctgggtcag cccgttgccg ttgcggaaaa aaccggcgaa
     7021 gcggcggcgg ttttcgggat tttggtagaa gctgcggttg attttgcgcg tcgcgcccca
     7081 ccaggcgcgc agggtttgcg gttcgagcgc ggtaatgtcg ttgcgctgct gcatgatttc
     7141 gacgattttg aaaatgtgtt cgggccgtct gaaaaaaata tcggtgtgcc gcgcggcgat
     7201 ttggttgttg acttggatgt agtcgtcgtc aatccgcagg gtaacgcgca acggggtgga
     7261 ggaaacgcgg ctttgcagca taggcgtgag gatgccgccc agttgtttga cggttttaat
     7321 cgcgcggtaa aacacgcgca tcagttcttc gctttggcgg cggaggttca agccttcata
     7381 acccatgctt tcggcgactt gcggctgcaa atcgaacagc aggcggtctt cggcgcgatt
     7441 ggcgtttaaa tgcagatgga tgcggatgtg ggcgaggcgg cggtagccgt gcgaaagcat
     7501 accggcttcg gcacgcgtca aaatccgctg tttgagcagg tcgggcaggt cggtcgccaa
     7561 gccttgcgcc ttcgctatcc aaagcagggt gtggatgtcg cgcagaccgc ccggacagct
     7621 tttgatattc ggctccaata ctgcccccga accttgcgat ttggcgtggc ggtgttccat
     7681 ctccaccagt tttgcctcga caaacgccgc cacattgcgc tgcgcgttca ttttttccgc
     7741 cagtttatcc accgtttggc ggttgccaaa caaaaaccta gcctctaaaa acgctgtgtc
     7801 ccccgtaata tcattgcgca cgctttcaca tagttcatca acgctgccgc tttttacaga
     7861 cggcatcagt ttgcagtccc acagggtttg aacaaaccgg gcaatctgtt cctgaatgcc
     7921 gtctgaaagc ggggcagggg agacaaccgc caaatccaca tccgaacagg gatacagttc
     7981 gccgcgcccg aagccgccca ccgccatcag gcataacgcg ctgttttgaa aatgttctac
     8041 ccacaatgcc gccagtaagg tttcgactgc cgccgtatat tccctgaaaa ataccgacac
     8101 gcggttggct ttcaaataat gcgcttcggc ggcatcgcgc tgccgtttga aggtttccag
     8161 tgctgaagac aggtttgcag gcatttttat tctttcgatt ggcgggaaaa gggaggtgga
     8221 tggttcggcg gtcaaatacc gctttcagac ggcatttgtc gggtatcggc ggaattggtc
     8281 atcagcttca accgttcctg cggcggcagc agcaactgat acgccgccac gcccaaagcc
     8341 gccgccattt tttcgatatt cgacagggcg atgttccagc gtttgcgctc gactgccgac
     8401 acataagtcc tgtccaaacc gcattgccgc gccaattctt cttgcgacca acccttgttc
     8461 acgcggaaaa gccgcatatt gtatgccaat accgcccgca aatcctgttc gtcaggcagt
     8521 ttggcaggcg gggtcaattt gttgcccatc atttgcttcc agataaatgg ttaaagttaa
     8581 gcatttgctg ttacggattt tacttcacat aaaagccaaa aaaaaggggt ggcggcagcc
     8641 acacccaaac acacacacat caagaggaaa gaggtaaaat caagacagat tgggaaacag
     8701 caaacaagca atctagattt catatcggta ttatcaaaca aaaaccgtta tcgagtattg
     8761 attcaaatca atttagattt gattcgcaaa ccggcaaaga aaaacggcat acccgtttat
     8821 acggatatgc cgtctgatga tgcaggggac tgctatattt ggcagtggtt tgtgttttag
     8881 tcctcttgcg ccgctgtttg caggtagttc ggcaaaccaa ttttgccgat cagttcctgc
     8941 tgggtttcaa gccagtcgat gtgttcttcg ttggtgtctt tttgtttttc caacaaatca
     9001 cggctgacgt aatcctgttg cgcttctgct gtggcgatgg cggcaagcag ggcttcgtgt
     9061 ttttcctgtt ctttggtcaa atcgcaggcg atgatttctt cggtggactc gccaatcaga
     9121 agcttgccca gttcttgcag gttcggcaga ccttcgagga acagaatgcg ctcgatcaaa
     9181 tcgtcggcag ctttcatttc aacgatggac tgtttgaaga aatgttcgcc cagttcttca
     9241 aagccccagt ttttcaaaat acgggcgtga aggaaatatt ggttgatggt taccagcagc
     9301 aagcctaagt ttttgtttag ctcgcggata accagacggt cgcctttcat acggactcct
     9361 tttattccga atacggatta cagttggctt tggtagtagt tgccttcgcc aattaactcg
     9421 atcaggcgaa gctgctgttc cagccagtgg gcgtggtctt cttcggtatc tttcagttgg
     9481 gcaaccatca ggtcgcgcgt aacatagtct tgagcctctt cgcacagttt gatgcctttt
     9541 ttcaacgcat cacgtacttc atattcggtt tgcaggtcgg ctttgaggca ggaaaccacg
     9601 tccgtgccga tattcagttc ggcgcgtgcc attttcggcg tgccgcccag catcaggatg
     9661 cggcggatga agtcttcggc gtgtgtggtt tcttcttcca tctcgtggtt gagacgttca
     9721 aaaagtttgg tgtagcccca ttcggagtag aggcgggagt ggataaagta ttggtcgcgt
     9781 gccgccagct cgccagacag caattcgttc atgtaatcta aaactgcttg attgccttgc
     9841 ataatatttc tcttttctta atttgggttt cgtgtagtta aacagtggat gtagcactgt
     9901 tcggaatgcg tgcattgtat gcaaaagctg tcggcatgac aaattttcta tttaaaatac
     9961 aaacaattat caaaagaaat agggcgtatt ccccgatgcc ttccaaatca gtatgctgtt
    10021 ttttatcggt tttttgtgct gttaaaacta ataatccata ttatccataa agaacattta
    10081 cacttgttaa ccatagctaa aagcaaatac ggtacggttt tttatcaaaa tttataatga
    10141 atcgttctca ttaaccgaca gattcttttg agattatcgg attttgggaa taaattatgc
    10201 cgtctgaggg gctttcagac ggcatagaca attaaagctg attaaacaac gcggcagaca
    10261 gcagcgtagg aaattatttt ttacttcgga acggtatttt gggtttaatg atgcccgcaa
    10321 ccgccgtggc tttcgcgtaa ggcttcggta gcctgttcgt cggcgtggta gctggaacgt
    10381 accatcgcgc cgatggcggc attgctgaag cccagttcgt atgcttcttt ttcaaagatt
    10441 ttgaactgct cgggcgtaac gtagcgcagg acgggcaggt gtccgtctga aggctggagg
    10501 tactgtccga tggtaatcat ttcgatattg tgcgcccgca tatcgcgcat aatttcacgc
    10561 acgtcttcgt ctgtttcgcc caagccgacc atgatgccgg atttggtcgg gatgtgcggc
    10621 atcatttctt tataacgttt taataagtct aaagaatgtt gataattggc accgggacgg
    10681 gcttttctgt acaggctcgg atgggtttct aggttgtggt tcatcacgtc gggcggggtt
    10741 tcggcaagga ttttgagtgc gatgtccaag cgtcctcgga agtcggggac gaggatttcg
    10801 attttggtgt tcgggctggt ttcgcggatg gctttgatgc agtcggcgaa atgctgtgcg
    10861 ccgccgtcgc gcaggtcgtc gcggtcgacg gaggtgatga cgacgtaacg caggttcatg
    10921 gctttgacgg attcggcgag gtttttcggt tcgtcggggt cgagcatatt cgggcggccg
    10981 tgtcccacgt cgcagaacgg gcagcggcgg gtgcagatgt cgcccataat catgaaggtc
    11041 gccgtgcctt tgctgaagca ttcgccgatg ttggggcagg aggcttcctc gcaaacggtg
    11101 tgcatttttt gttcgcgcaa aatgtctttg atttcaaaga atttgcgcga tggaagtttg
    11161 gcgcgtatcc attcgggctt ttttaatttt tcctgaaggg ggacgacttt gatggggatg
    11221 cgggcggttt tgtccgcgcc tctgagtttg atgccgcgtt tggggtcgtc ggttttgatt
    11281 tcactcattg ttgtctgctt tcggtgtgaa ttgtgtttca aggtgtgcgg taagtttggc
    11341 ggcgacttcg tccggcgtgg ggcagggttg gacaaaatcc gcgatttgcg tcatttccat
    11401 accggcgtag ccgcaggggt tgatgtgggt aaacgggctt aaatccatat tgacgttgag
    11461 cgcaagcccg tgatagacgg agccgttttt gatacgcagc cccagtgagg cgattttgcg
    11521 ttctccgaca taaacgccgg ggcgtttggg gtctgccgcc gcttcgatgc cgtattctgc
    11581 caatgtggcg atgatgctgt tttcaagcgc ggaaacgatg ttgcggacgc tggttttgcg
    11641 ccgtttgaaa tcaatcatcg tataaacgac caattgcccg ggcccgtgat aggtaatctg
    11701 cccgccccgg tcgatttgga cgacgggaat gtcgtcgcga atcagcaggt gttcgggttt
    11761 tcccaccagt ccttgtgtga acacgggcgg gtgttcgacg acccacagtt cgtcttcggt
    11821 gtcagcattc cgtccggcat taaaggtttt catcgcttca aaagtcggca gatattcgac
    11881 caaacctttg tgtatgattt tcatctcaaa gtaccacttt gaccagttcg tgcgaagtca
    11941 gcgcgcggta gatgttgtcc aattgttctt ggttttcaac ctttacctga acggtggcgc
    12001 cggtatagtt gcctttgctg ctcggacgcg tggtgatgtg gtgcgcctgc gtgtcggggg
    12061 cgtggaggcg gacggtgtcc aataccgcct gctcgaactc gggatgaacc gcccccatta
    12121 cttttaatgg gaaggtgcag ggaaattcga tgagggatgt tttgttttct tgttcggtca
    12181 tgatgtgctg ccttgttgtg tacggtatgc cgtctgaagg cgggtttgcc tttcagacgg
    12241 catcggatgt gcgttatttt agcctaaacc gcgataacag gctatcggga aggcggaggc
    12301 ttttttgacg gcgcggcggt tctgctatac tggcgcgcaa tattattttt agaagggtgg
    12361 tttttatgta tcggaggaaa gggtggggca tcaagccgtg gatgggtgcc ggtgcggcgt
    12421 ttgccgcctt ggtttggctg attttcgcgc tcggcgatac tttgactccg tttgcggttg
    12481 cggcggtgct ggcgtatgtg ttggaccctt tggtcgaatg gttgcagaaa aagggtttga
    12541 accgtgcatc cgcttcgatg tctgtgatgg tgttttcctt gattttgttg ttggcattat
    12601 tgttgattat tgtccctatg ctggtcgggc agttcaataa tttggcatcg cgcctacccc
    12661 aattgatcag ttttatgcag aacacgctgc tgccgtggtt gaaaaataca atcggcggat
    12721 atatggaaat cgatcaggca tctattattg cgtggcttca ggcgcatacg ggcgagttga
    12781 gcaacgcgct taaggcgtgg tttcccgttt tgatgaggca gggcggcaat attgtcagca
    12841 gtatcggcaa cctactgctg ctgcccttgc tgctttatta tttcctgctg gattggcagc
    12901 ggtggtcgtg cggcatcgcc aaactggttc cgaggcgttt tgccggtgct tatacgcgca
    12961 ttacgggtaa tttgaacgag gtattgggcg aatttttgcg cgggcagctt ctggtgatgc
    13021 tgattatggg tttggtttac ggcttggggt tggtgctggt cgggctggat tcggggtttg
    13081 caatcggtat ggttgccggt attttggttt ttgttcccta tttgggcgcg tttacaggac
    13141 tgctgctggc aaccgtcgcc gccttgctcc agttcggttc gtggaacggc atcctatcgg
    13201 tttgggcggt ttttgccgta ggacagtttc tcgaaagttt tttcattacg ccgaaaatcg
    13261 tgggagaccg tatcgggctg tcgccgtttt gggttatctt ttccctgatg gcgttcggac
    13321 agctgatggg tttcgtcgga atgttggcag gattgccttt ggccgccgta accttggtct
    13381 tgcttcgcga gggcgtgcag aaatattttg ccggcagttt ttaccggggc aggtaggcgg
    13441 ttccgaaaca tatttgaagc gggatacaac cctgcccggg tttaaatata gtggattaac
    13501 aaaaatcagg acaaggcgac gaagccgcag acagtacaga tagtacggca aggcgaggca
    13561 acgccgtact ggtttttgtt aatccactat aatttgaagc ggaatacaac cttgcccggg
    13621 tttaaataaa aatgccgtct gaaccccgaa aacagagctt cagacggcat tttcatcacg
    13681 gcttatttgg cggttttgct gctgtcgata attttcatac cggcagaaat caggctgccg
    13741 atgtcggcaa cattggcggg cataatcagc gtattgcttt ctttggcaag attgttgaac
    13801 gcagcgacgt attgttccgc aatcttcaga ttgaccgcat ccgcgccgcc ttgggtttga
    13861 agggcggcgg caatttgacg gatggcttcg gcattggctt cggcaacaag gcgcagggat
    13921 tccgcttcgc ctttggcgcg gttgatgcgg gcgattttct cggcatttga cgcattgacc
    13981 gcggcctggg cctcgccttc ggattgttgg atttcggctt cgcgctgacc actggcaagg
    14041 ttgatttgtt cgattttacg gccttcggat tcggcgatac gggcgcgttt ttcgcgttcg
    14101 gcagtaattt gcgcctgcat tgagcgaagg atttcttgcg gcggaaccaa atccttgatt
    14161 tcgtaacgga gaactttcac accccaagct ccggcggctt catcgagggc ggaaacgacg
    14221 gtgctgttga tttcgtcgcg ttcttcaaac gttttgtcca actccatacg cccgataacg
    14281 gaacgcagcg tcgtttgggc aagctgggta atcgccataa tgtagttgct cgaaccgtat
    14341 gaggcgagtt tgggatcggt tacttggaaa tagatgatgc cgtcaaccgt cagctgggtg
    14401 ttgtcgcgcg tgatgcagac ctggctgggt acgtctaaag ggatttcttt cagcgaatga
    14461 cggtaggcga cgcggtcgat aaagggaatc aaaatattca aaccggccgt caaggcgcga
    14521 tggaaacgtc caagcctttc gacaacgtgg acttcctgtt gtgggatgac aacaaaggat
    14581 ttgaaaccga aaacggcgac ggctaccaac aagataatga aaaattccat aattcctccg
    14641 agtgttaagg gtgtgtgata ataagaaggt tgccttcctt gcggacaatg agggcgcgcg
    14701 ttcccggttc aaacacatcc tgccccgtat tttgcgcctg ccagtgcgta ccgcgataaa
    14761 aaacttcgta acggttgccg cctgcgtgcc ggaggatttc ggcatattgc ccggcatcca
    14821 aatcctgata tgaatccgtt tcaacttttc ccacggcggt cttggcgtgt acgaaccaaa
    14881 tacccagcgc ggaaagcaga gcggcggtca agacggcggc aggcgtgctg ccggtcagcc
    14941 cgtaagcaat gcccgaaccc gccaaagccg cgctgacaac caaaagataa accgttcccg
    15001 tcaataattc gatgattaag acggcaacag cggcaacaaa ccatacagtc atacatttcc
    15061 ccacaaagcg cgtcgtttga caaaatcacg cgatatcagc agtatagccg aatttgaaag
    15121 gatagggcag atatggatac ttggcacgat gcactgggca acgaaaaacg gcaaccgtat
    15181 tttcaggaaa ttttaaatgc agtcaggcag gaacgtttgt cggggcaaat catctatccg
    15241 ccggcggagg atgtgttcaa cgcattccgc ctgacagcgt ttgaccgagt caaagtcgtc
    15301 attctcggac aagacccgta tcacggggca gggcaggcgc acggtttggc attttccgtc
    15361 aggcagggtg tccgcatacc gccgtcttta ctcaatatct acaaagagtt ggaaaccgac
    15421 atcaacggtt tttccattcc cgatcacggc tgcctgacgg cttgggcgga gcagggcgta
    15481 ttgcttctga acacggtttt gacggtgcgt gcaggacagg cgcattcgca cgccctttta
    15541 ggctgggaac gctttaccga taccgtcatc aggcagcttg cggcgcaccg caagcacctt
    15601 gtcttcatgt tgtggggtgg gtatgcacaa caaaaaggga ggctgataga cagtcaaaat
    15661 catttgatat tgaccgcacc gcatccgtct cctctgtcgg catatcgcgg ttttttcggc
    15721 tgccgccatt tttcacaggc aaacagctat ttgagtcaac acggtatcga accgataaac
    15781 tggaagctat gaatgccgat atagccgttg ccgccggcgt gttaaaatcg cgattgagct
    15841 gcacgccggt acgacttttg acgacatcgt caaactcaaa aacaccgccg acatcggcga
    15901 ccgcctgaat aagattatcg cccaaattgc cgaagccaac gacttaaaag gcgtgatcga
    15961 cgttaccgac ttcaacgacg aagacaaact gggtaaaggt aaggagatga tcgaccgttt
    16021 gagcaggctt gtcggcattt ttaaaaagct caacctttct tccaaccaag ccgaagacga
    16081 cgatttgtta ggtgatgcct acgaatacct gatgcgccat tttgcgaccg agtcaggcaa
    16141 atccaaaggg cagttttaca cgcctgccga agtctcccgc attatggcga agattatcgg
    16201 aatcagcgca gattgccgtc cagcaccagc gtttatgacc cgacctgcgg ctcgggttcg
    16261 ctgttgctca aagccgccgc ccaagccggc agccaaatca gcctttacgg tcaggaaaaa
    16321 gatgtggcaa ccgcgtccct tgcccgtatg aatatgattt tgcacaacaa cgaaaccgcc
    16381 gaaatcaaca ccgggaacac cttgtccgat tcgtctttcc gtgatgaaaa cgacgggctt
    16441 aagaccttcg attttgccgt tgccaatccg ccttatcccg cccgaaaaaa acggcgatta
    16501 cgcctttttg ctgcatctgc tcaaaagcct gaaaccaagc ggcaaaggtg cgattattct
    16561 tccgcacggt gtgctgtttc gcggcaatgc cgaagcgcgt attcgcacgg aattgcttaa
    16621 ccttgacctt attaaaggca ttatcgggct gcctgccaac ctgttttacg gcacgggcat
    16681 tcctgcctgc atcatcgtca tcgacaaaga acacgcccaa accgcccaat ttgccgaaga
    16741 gggaacaaac caagttatca gcggcggcag cgtgtttatg attgacgcat cgcgcggctt
    16801 cattaaagac ggcaacaaaa accgtctgcg tgagcaagac attcacaaaa tcatcgacac
    16861 tttcacaaac ctcgttacag ccgtatggtg catttaagcg aaatcgcagc acaagattac
    16921 aaccttaatc tgcctcgcta tatcgacagc ggagaagtcg aagacctgca aaatctcgcc
    16981 gcctatctat ctttatggcg gcatacctgc gcacgatatg gacgcattgg aagcctattg
    17041 gcaagtttta ggccgtatga aaaacgagtt gtttgccgaa cacgatggcc actttaccac
    17101 tatacaacgg aatcgattgc aaatctttcc cactctcaac agcttaaaat cctgcgggat
    17161 tggtgtggaa tttagggcta atctagtaca gccccaaatt taatccacta taaaatcgaa
    17221 agcagccaaa tcaaagccca tatattggcg caccccgatt acgccgcctt caaagccgga
    17281 cacctggcaa agtttgccgc gtggcacact caaaacgacc ttgccgccat ccaaccgggc
    17341 aggcttatcc ggaaatggag cgaaagcctg ctggacgcgt tcaaacccgg cagcctgatt
    17401 gaagaatacg atttctacca aatcctgacg gactactggg cggaaaccct gcaagacgat
    17461 gtttatctca tcgcccaaga tggctggaag gcggttaaaa acctggccga aatcaccaaa
    17521 gaaagcgatg aagccgcgaa cctgaccgtc gtctttgagg aaaccgaaac cgacaaaaaa
    17581 ggcaaagcca aaaccaagcg catcagcaaa aaataccgca gcgaagtcat cgcccccgag
    17641 ctggttgccc gccgctactt ttcagacggc atcgccaagc tggaagaaaa acaaagcgag
    17701 ctggaacgcc taagccaaga attggaaaac cacatagaag aacacggcgg cgaagagggt
    17761 gcgctgaacg acgtattgga tgcaaaaggc aaactttccg ccaaacttct gaaaaccgca
    17821 ttggaagaaa gcggcataga agaaggcgaa cgggctgttt tacaaaccac ccaaacactg
    17881 atgacgcagg aaaaagccgc gaaagacgca gtcaaaaccc aaatcgaagc cctgaacctt
    17941 gccgtattca aacaattcgg ccgactttcc gaagccgaaa tcaagcagct tgccgttcaa
    18001 gacaaatggc ttgccgattt acaaagtcga atcgaaaatc gcttggaaaa cagtattcag
    18061 cagcttatca gccgcttgaa cacgctggaa gaccgctacc gcagcccgat ggccgagctt
    18121 gcccgagaag tggaaaagtg gcaaagcaaa gtcaatgccc accttgaaaa tatgggtttt
    18181 ggaggctgaa atggcggcac agacaggcta taaggcgagc gggttttgag acctttgcaa
    18241 aattccccaa aatcccctaa attcccacca agacatttag gggatcgcgg ttcgggtgtc
    18301 cgcaccgctt aatacgtcgt cgtccacgaa ctgacccatt tgctcgaacg ccatcgcaac
    18361 gcccgtttta tggcgcatat ggacaacttt ctcccaaact ggcaaagcat caaacaacag
    18421 cttaatgcct tggagttatt tgcacaaata tataatttaa cataatatac attatgcgaa
    18481 ctatcggaaa cagttgtacg tgtccctgtg gtctttccaa gtaggaaaat taaagtatgg
    18541 ccaatgcggc tgaatgtata gcccggagca tccgcgtatc cgaaggtact gaacgacatg
    18601 ccctgcatcc ctttcgacgc ttccatccag ccggtattgg gaaatacgtt gaccttcaat
    18661 ataatataca ggcagccgac acacaggata tgccgctgct ttttcatcat ttcttctgtc
    18721 aaatccttgg aacggtcgat ttgaaaacac ggctttacat acgccccagt tccctttgca
    18781 gggcttgaat attttgctgc ctgtccaata cattgctttg taatgcattt atttcttgat
    18841 ggttgatgtt gccgcccttt gccagacgtg cttgtgataa cattttttgg gcttcagtca
    18901 gggctttgcg ttcgttgctc aattctgctt cgagaatgga gcgtctgctg ttgtttgagg
    18961 gtgcttgttg cggcggcggc gtattggatt ttgccggctt ggatactgtt ttgaccgggg
    19021 ctttatattt gacaacctgt ccgccgtttg acggtgatga taccggttcg ggcgtttggg
    19081 gcgggatata gcgttcgctg ctgtagttgc cgattggggg caaatcggtt gagtggcagc
    19141 ttttggacgg cttggtggtg taaacggttt ctccgttgat tgtgcaggtg tagattttgg
    19201 ccgcattcgc acccaatggg cttgaaatca gggaaaagtt gattaggatt aaggggagtt
    19261 ttgatttcat aatgtgcttg atgctcggat aattatttga ttttttggta ttttttataa
    19321 tgctttcttg gcgttttacg ggcttttctt ttcggttgtt tgcttttgat tttctttcgg
    19381 ggctttggca gcctgcttgt tctttttccc ggcaggtttt ttgtttttct ttttactttc
    19441 tatgtgtatt ttggcttctt aactgagttt tttaattttc aggcggtatc cgcctccctg
    19501 atggctgctg attttaggta aatccgcatc ggcgcacgat cctgctgggg ctgatgtata
    19561 tacgcttttg ccatttgagt tgcaatggta tacggaggct tgcgccgccg cgccggaaag
    19621 ggacaggaga cccaaggcgg caaaaagtct gatgtttata ccggtaaaag gcggtaataa
    19681 cgcccgaatt ataccgttat tggcaggcaa agataagcac cctgcccgcg cttctttatc
    19741 gctcggcaaa ctgtttctcg atttcagttt caatccgttc caattcttct tgacaagcca
    19801 gccaaacctc ttcgatttgg gcaagttgtg ttttgacttt tgccagctgg gataaggtat
    19861 tttgcaattt ttctttgttt gcttcaaggt aagcgtcttc ttgtgctaaa aatgcttcac
    19921 atgccgtctg aatttcggaa agctgcgcca tttctttttc ggcacggtct attttctgct
    19981 gtatcggctt gccgcgtcgg gctttttcct gacggatttg cgcttcgatg cgcttggtgt
    20041 ctttgcggct ttggctttgt gcggatgctg cgggtgcggc ggcggcgttt tcctgtgcca
    20101 aacgccattg gcggtaatcg ttcaaatcgc cgtcgaagtt cttcagacgg cctttgtcga
    20161 tcaggaggaa gctgtcggta gtcgcttcaa gcaggctgcg gtcgtgcgat acgatgatta
    20221 aggcgccttg gaaactttgc aacgcgagcg ttaaggcgtg gcgcatatcc aagtccaaat
    20281 ggttggtcgg ttcgtcaagc agcaacaggt tcggcttttg ccagataatc atggcaaggg
    20341 caaggcgggc tttttctccg ccggaaaaag gttcggtttt ctgtaacgcc atatcgccaa
    20401 caaaattgaa gccgccgagg aaatttcgga tttcttgttc gcgtacttcg ggagaaagct
    20461 gctgaatatg ccaaacaggg ttttggtcgg cgcggatggt atcgagttgg tgttgggcaa
    20521 aatagccgat attgagtttt tcggaacgga cgatgctgcc agagagcaaa tcgattttgc
    20581 ccgccaaggc tttgataaat gtagatttac cgctgccgtt gacacccaat aaaccatagc
    20641 gcgcgccgct ttccagcgac agggtaatgt cgtgcaaaac agttttgcct tcgtaaccca
    20701 aatctgcgtg ttccagcttc agcaaaggat tgggcagatg ctcgggattg taaaactcaa
    20761 aggaaaactc gctgtccaaa tgcgcgggag cgatgcgttc gagctttgcc aaagccttca
    20821 tgcggctttg cgcctgaacg gctttggtgg ctttggcttt gaagcggtcg ataaaggatt
    20881 gcagatgttt gatttgcgcc tgctgtttga cataggcggc ttgttgctgc gcgagacgct
    20941 gcgcgcgttc gttttggtaa aaatcgtaat tgccgccgta ttgcgtgagc ttttgctggg
    21001 acaattcgat ggtttgggtg gttgccgcat tgaggaaatc gcggtcgtgg gaaatgatga
    21061 tttgcgtgca gggtaaagag gcaaggtggt tttccagcca caagacggtt tccaaatcca
    21121 agtggttggt cggttcgtcc aaaagcagca aatcggcgcg gcaaatcagg gcttgcgcaa
    21181 gattcaagcg catacgccag ccgccggaaa aggatttgac ggggcggctg tgttcttctt
    21241 gcgaaaaacc cagcccgttc aacaattttg ccgcgcgggc cggcgcggta taagcgtcga
    21301 tttcttccaa tttggcatga tattccgcct gtttcatacc gtcgttttgc gcttccgcct
    21361 gcctcaatgc cgtctgaagg gtctgtaact cggcatcgcc ctgcaaaacg taatctaaag
    21421 cggaaatatc caaatcgggc gtttcttggg aaacggaagc gagccgccag tttttcggaa
    21481 tcgagacatc gccgccgtcc tgagtgattt cacccttgat taaggcaaac aggctcgatt
    21541 tgcccgtccc gtttttgccg atcaaaccga cgcgctgacc gggattgacg gtagcgttgg
    21601 ctttgtcgag caggactttc aaaccgcgtt gcagggtgag gtttttgatt tcaatcataa
    21661 cggaaacatc gtcgggcggg aaaagcccgt attttacctg aaagtcagtg ccgatgccgt
    21721 ctgaaacggg aaatttacgg ctgaagccaa gcccaagccc tgcgcccttc cgagtgcagg
    21781 aaaaccaatg tcctgaatgc cgaatcggta ttcatacatt ccacgccgat tccgattcga
    21841 gaaaaatccg ccatgatttt gggatggata aactcctgag ccgcgcccgt cccgataatc
    21901 aatatttcca gatagtcaac aggtttgatg tcggacaaca ggttttccgg agtcagatcg
    21961 gacaaggttc ggcattgcga caggcagacc gaatccttat gtacaagcac gggtttatgg
    22021 aaactttgcc ccgccagccg gattccgccc gcaccgcatt catattccgc aaactgtccg
    22081 tctatcggat tttcttcaaa caacattttt ttaccccgtt gccgcatcat ctacaccgaa
    22141 aggggtgcaa aatcaggcga attcatgtag gattggcaga tttcatctga cccgcctgcc
    22201 gatttcagac ggcatttgat tcaaagtgcg gcacaattat atcggcagcg gatattttcg
    22261 tctttcaata tttacatttc agtcggctta caaggagaca caatgaagcc agtaaacatc
    22321 ggtcttttag gtttgggtac ggtcggcggc ggtacggctg ccgtgttgcg ggacaacgcg
    22381 gaggaaattt cccgccgctt ggggcgcgaa gtgcgcatca gtgccgtatg cgacttgagc
    22441 gaagaaaaag cccgccaaat ctgcccgtcc gcagcctttg tcaaagatcc gttcgaactg
    22501 gtcgcgcgta aagacgtcga tgtcgtcgtc gaattgttcg gcggcacggg cattgccaaa
    22561 gatgcggtgt tgaaagccat tgaaaacggc aaacacatcg ttaccgccaa caaaaaactg
    22621 ctcgccgaat acggcaacga aatcttcccg ctggcggaag aaaaaaatgt catggtgcaa
    22681 tttgaagcgg cagtagcggg cggtatccca atcatcaaag ccctgcgcga aggtttggcg
    22741 gcaaacagga ttaaatccat cgccggcatt attaacggca ccagcaactt catcctctcc
    22801 gaaatgcgcg aaaaaggcag cgcgtttgcc gatgtactga aagaagcgca ggcattgggt
    22861 tatgccgaag ccgatccgac cttcgacatc gaaggcaacg atgcgggcca taaaatcacc
    22921 atcatgagcg cactggcatt cggcacgccg atgaactttt ccgcctgcta cctcgaaggc
    22981 atcagcaaac tcgacagccg cgacatcaaa tacgccgaag aacttggcta tcgcatcaaa
    23041 ctgttgggca ttacccgcaa aaccggcaaa ggcatcgagc tgcgcgtcca ccctaccctg
    23101 attcccgaaa gccgcctctt ggcaaacgtc aacggcgtga tgaacgccgt gcgcgtcaac
    23161 gccgatatgg ttggcgaaac cttatattac ggcgcgggcg cgggcgcatt gccgaccgct
    23221 tccgccgtgg ttgccgatat catcgacatc gcccgcctgg ttgaagccga taccgcccac
    23281 cgcgtaccgc atctggcgtt ccaacccgcg caagtccaag cgcaaaccat cctgcctatg
    23341 gacgaaatta ccagcagcta ctacctgcgc gtccaagcca aagacgaacc gggcacgctg
    23401 gggcaaatcg ccgcgctgtt ggcacaagaa aacgtgtcca tcgaagcact gattcaaaaa
    23461 ggcgtgattg atcagaccac tgccgaaatc gtgattctga cccacagcac ggtcgaaaaa
    23521 cacatcaagt cggcaatcgc agccatcgaa gcactggatt gcgtggaaaa accgattacc
    23581 atgatccgca tggaaagcct gcatgactga gccgaaacac gaaatgccga cggaagagca
    23641 ggttgccgcg cgcaaaaaag caaaagccaa aatccgcacc atccgcattt gggcatgggt
    23701 cattttggcg ttgctcgctt caaccgccct gctctcccaa tgcgcgatgt ccaaaccgca
    23761 ggcaaaacag aaaattgtcg agtcttgcgt gaagaatatt ccgtttgccg aaaaatggca
    23821 aaacgatttg cgggcccgcg gtttagattc aaacaatacc cgccttaccg tcgactactg
    23881 caaatgtatg tgggagcagc ctttggacag attgagcgag aaacagatta gttccttcgg
    23941 caaactcggc gcacaagaac agcttgacct gctcggcggc gcaaatgcct ttgaaacgcg
    24001 agacaagcag tgtgttgccg atttgaaatc agaataatgt ggaccgataa aaaagccgat
    24061 tctttaaaga atcggctttt ttcataaaaa acggcttaca gtgcgtcttt caatgcttta
    24121 cctgcacgga atttaggcgt tttggcggcg gcaatggtca gaggctcgcc ggttttgggg
    24181 ttgcggcctt ggcgttccgc acgttcgccc acgtagaaag taccgaaacc gaccaaagta
    24241 acggtgtcgc cttgtttcag ggcggtggtt actgcattgg tagtggcatc caaagctttt
    24301 tgtgcggcgg ctttggaaat gtcggcttct tgagcaatcg cttcgatcaa ttcagacttg
    24361 ttcacaatca gtcccttcct gtcttaaaaa atgatgaaat gcccgaatac tcggggtttg
    24421 tactgcttga gcaactttcg ctttatagca attctgaaat tgccgtgtca agcaaaaaat
    24481 acggaatcac cctatttgac aggctttcag gacgaaaccg catttttaca acacatttcc
    24541 tgcgtttcaa tgtttggttg ccctgctgcg gggttttggt tttgaagcgg attccgccac
    24601 cgcttccgca ccagaaggtt ctgcccaagg ctcaggctgg ctttccaaac ccagagccaa
    24661 tacctcgtct atccatttga ccggatggat ggtcaggccg gttttcacgt tttcagggat
    24721 ttcttccaag tctttgaagt tgtcttttgg aattaaaacg tgtttgatgc cgccgcgaag
    24781 cgcagccaac agtttttcct tcagaccgcc aatcggcagg acttcgccgc gcagggtaat
    24841 ttcgcccgtc atcgctacat cggcgcgtac cgggattttg gaaaatgcag acaccatcgc
    24901 caaagtcatg gcaatgcccg cactcggacc gtccttcggc gttgcacctt cgggaacatg
    24961 gacatggatg tcttttttct cgtaaaaatc agaagccaag cccactgatt ccgcgcggga
    25021 gcggacaacc gaccacgctg cagacacgga ttccttcatc acatcgccca actggccggt
    25081 gcactgaatc acgcccttac ccggcaatgc tgcggcttcg acggtcagca attcgccgcc
    25141 gacttctgtc cacgccagac cggttacttg tccgatacgg ttttcgcttt cggcaacgcc
    25201 gtaatcgaag cggcgcacac ccaaatagtc gtgcagattt ttctcattta ctttaaccgc
    25261 tttaggtttg gctttgctgg ttttcttggt ttcagacaac ctcttcttat cttcgtccaa
    25321 ggtaatctgc atcaccacct tgcggcagat tttggcaatc tcgcggtcga gcgaacgcac
    25381 gcccgcctcg cgggtgtagt aacggataat atcgcgcacc gcgctttctt cgacgagcaa
    25441 ttcgccttct ttcacgccgt tgcgcttcat ttgcttcggc acgaggtact gcatcgcgat
    25501 attgattttt tcgtcttcgg tgtagccgga cagacggatg atttccatac ggtcgagcag
    25561 cggggtcggg atattcaggc tgtttgaagt cgcaataaac atcacatcgc tcaaatcgta
    25621 atccacttcg gcataatgat cggcgaactt gttgttttgc tcgggatcaa gcacttcgag
    25681 caacgcgctg gcgggatcgc cccggaagtc gctacccaat ttgtcgattt cgtcgagcag
    25741 gaacaatggg ttttttacgc cggcttttgc catattctgc aaaatcttac cgggcatgga
    25801 gccgatatag gtgcggcggt gtccccggat ttcgctttcg tcgcgcacgc cgcccaaagc
    25861 catgcggaca tatttccgcc ccgttgcttt ggcgatggat tcgcccaaag aggttttgcc
    25921 cacgcctgga gggccgacca ggcacagaat cgggcctttg agtttgtcca tacgtttttg
    25981 gacggcgagg tattccaaaa tccgttcttt gactttttcc aggccgtagt ggtcggtatc
    26041 cagcaccaat ccggctttgg cgatgtcttt gctgacgcgg gattttttct tccacggcag
    26101 ttcgagcagg gtgtcgatgt agttgcgtac gacggtggat tcggcagaca tcggcggcat
    26161 cattttgagc tttttcagtt cggacaggca tttttcttcc gcttctttgc tcatccccgc
    26221 ctttttgatg cctgcttcca aggcatccag ttcgccgttt tcgtcttctt cgcccaattc
    26281 tttgtgtatc gctttaatct gttcgttcag ataatattcg cgctgggatt tttccatttg
    26341 gcgtttgacg cgtccgcgta tgcgtttttc ggcctgcata atgtcgagtt cggattccag
    26401 ctgtgccagc aggaattcca tccgtttgcc gatttcggga atttccaaaa tctgttggcg
    26461 ttgcgccagt ttcaactgca aatgcgctgc gaccgtatcg gttagccggc tgttttcggc
    26521 aatgccgttg atgctgccga taatttcggc ggggattttt ttattgagtt tggcgtattg
    26581 ttcaaactgc gccaacaggg tgcggcgcac ggcttcgagg tcggtattgc cgcccgtgtc
    26641 ttcttccacg accgcctcta tatgggaaac gaacagaccg cccgtgtctt cgatggtcag
    26701 aacacgtccg cgatacagac cttcgaccaa tacttttacc gtgccgtccg gcagtttcaa
    26761 tacctgtaag acttgtgcga cggtaccggt ctgatacagg tcggcggcaa ccggttcttc
    26821 tagcgccgca tcggtttgtg ccaataggaa aaccggttcc tcgcgggtaa tggcgttttc
    26881 cagtgcggcg atggatttcg gcctgccgac aaacagcggc agaaccatat gcgggtaaac
    26941 gacgacatcc cgcaaaggaa gggttgccaa ggcggcatat tcctcaaaat gcttttcttt
    27001 ttgtgtcata ggtactctct tgtgtctgac agattgccga ttttcgcgta cattggggtt
    27061 gaaggtatta tttcaagcat atgtggttta tttatggagt ttgatgcgat gccgtctgaa
    27121 acattccggc ttcagactgc atgggcttgg aaagacaagg cgggaacaaa aaactgttct
    27181 gtgttgccgc tccttgctgt accatccgta tggtttacgg ttctgccgcc ctattttcaa
    27241 aacatgacgc aggtatccca tgtcttcttt tatttttccc gataacgggg ccgaatggcg
    27301 caacgaaagt gtgcaaaagc cgcccaaagg ttggcattat gtccgcgaaa gcggtgcaga
    27361 cggcattttg aaggctgcct atcaaaatat tgcaactgtc tggcagggcg atttccacaa
    27421 tgccaaacag gtgctttctg caatgaagaa gagggctcgc aaacctgccg ccgtccgttc
    27481 cgatgcggat atcgccgccc ttttccatgc ccaccgtatg aagcaggcgc agcagagccg
    27541 tattctgaat atgcttgccg ttgaaatccg ccccggtttt gtgttggaca acaaacgcgc
    27601 gcccgatata cgcgccgccc tgctcgacgt gtacggagag gcggacggca aaccgttttt
    27661 cctgccgctc aatctgctgc tggggtttat gggtgcgcac gagtggcata agaaaggggt
    27721 tgccgttccg cagctgggcg gcagcataca cgttcctttc ggcgtattct cgccgttgcg
    27781 cggcgaatac ctcgacctgc tcgcccatgc gccgtcaacg ggttttcaga cggcattcga
    27841 tatcgggacg ggctcgggcg tgcttgccgc cattttggcg aaacagggca ttccttccgt
    27901 catcggcacg gataccaatc cgaaagccgt cgcctgcgcc cgtgccaata ttgcccgttt
    27961 gggctttgaa aaacaggttg agatacggga aaccgatctg tttcccgaag ggtttgccga
    28021 tctgattgtc tgcaatccac cctggcttcc cgccaagccg acttccgccg tcgaatccgc
    28081 gttatacgac cccgaatctg cgatgctggc tgcgtttttg cgggatgcgc cgaaacatct
    28141 gaatcccgac ggagaaatcc gcctgattat ttccgacctt gcagagcatt tggggctgcg
    28201 ccctgccgat tttttggaaa aggcatttat ccgggcgggt ttgcgtgttg ccgatatgat
    28261 gaaaaccaag ccgaagcaca aaaaagccgc gaatccgagc gatccgcttg cttttgcgcg
    28321 aacccgggaa accactttcc tataccgttt gaaaaaggca taaggggcgg cggcgcggca
    28381 ttcgggcgga ttattcttgt gaaaataccc gctcgagcat actgcccaat gccgtctgac
    28441 gcgttttgac agtggcggca gcttgccgga aggtttcttc tccgccgaag aatacgaact
    28501 tctccctcgc gcgggtaatg gcggtatata acagctcctt actcaatccg gacaatgcat
    28561 cgtccccttc gtccgaaggt gcggcggaag gcggcagcag ccagacttcc cgatattccg
    28621 aaccttggct tttgtggacg gtcatggcga atgcgggttc gaaatcgggc aggcagctta
    28681 ccgctacctt tttaaatccg tccgcatcgg caaaataggc ggcaaggctg ccctgccgtc
    28741 cgacatcttc cataatcaat ccgatgtcgc cgttgaacag ttcaagcgcg tagtcgttct
    28801 gtctgatcat aatcggttct ccggcgaaat aggcctgatg ttccggtatg ttcattttgc
    28861 ggcgtacatg gctgcaatag gcttcgttga agtcttccgc atcctgccgc caagctgcca
    28921 ggaccacgat atccgagatg cctgcgtatg cggcttcgat attgccgtct tttaccgcct
    28981 gccaataggc tttgtgcgcc cggtacaacc tttcgactcg agcgttcgga ctgcattccg
    29041 aatgttccag ttcgtccgga aaccggtcaa acaatgccca cgccccctca tcgcccgata
    29101 cggcggcacg ggcaaggcag ccgatgccac tgttgtcgcc gaagcggtgg ctgaacgaca
    29161 gatgggcggt gttttgcgcc aacacgggcg gatttgcgct gacgctgaaa ccgtgttccg
    29221 gaaggaagcc ggccagcctt tggtgcgttt ctccgtccaa aacggttttg tgcgacaaaa
    29281 cggacagcac cgccccgatt ccgacggacg ggagctggtt ttcatccccc agcagaatca
    29341 cgcgcgcgcc ggttttgacc gcttttaaaa gttgcaacat caatgcggta tccaacatgg
    29401 aggcttcatc gataaccaat acgtccaacg gcagcgggta aacagggttg aacgccgcct
    29461 gcattttggg cgggcgcagc ttcagcagtc ggtggacggt ttgcccttcc agtttgagca
    29521 aatggcggcg gatggcctcc ggcgcgtcaa aaccgttgat tgcacggtgc agcgcgcgcg
    29581 ccatatgtgc cgccgctttg cctgtcggtg cggcaagcgc gatgttggga agattttcgt
    29641 cttcaccgca aatcagcgcc agcagtttgg caaccgttgt cgttttgccc gttcctggcc
    29701 cgccggtaat caccataaaa gactgcaaca gtgccaaggc ggcggcatcg cgctgccctt
    29761 cgctgcccgt gccttgaaac cattttgcga ggttttgccg cgcgcctgcc gcgtcggggg
    29821 cggacgtgcc ggctgccgcc aagcgtttta tctcggcagc caaatcgtat tccaactgcc
    29881 acatcctgcc caaaaacagc cttctgcctt ccaaaatcaa aggcgcggcg gatgttccga
    29941 ccacgggtgc gagtgccgac agcgcgtcag cctcgccacc gctcaaacgg ataaacgaat
    30001 gaccgttttg caatgcctga aacaggcgtt cggtgcagtt tgcaagcact tcgctgcctg
    30061 aacccgcata gcgtgccaaa aaccagattg ccgcccttgc cgccgcttgg gcaaattcat
    30121 ctgtctgccg ttccattgta ttccttatcc aaatgccgtc tgaaggcgtg gggcttcaga
    30181 cggcgcggtg ttgtttcggc tgtttaggcg tttgcgccct gtttggggtg caggctgccg
    30241 tctttcatga ccatcacgcg ctcgaagcgg ccggcgagtt cgtcgtcgtg cgttacgacc
    30301 accagccccg ttcccaattc tgttttcagt tccagcatca tatccaaaac attcctggcg
    30361 ttcgcacgat cgagattgcc ggtcggttcg tcggcaagca ggcatttggg ttgcgtaacc
    30421 aaggcgcgtg caatggcggc acgctgccgc tcaccgccgg acagttcgcc cgcgcggtgc
    30481 gccgaacggt gcttcaatcc gaccttttcc agcatcgcca ttgccgtttc tgccgcctct
    30541 tcccgttttt tcttgccgat cagaagcggc atcatcacgt tttccagtgc cgaaaattca
    30601 ggcagaagat ggtggaactg gtacacgaaa ccgagatggc ggttgcgcag gatgcccagt
    30661 tgtcgctggc ttaatgtacg caaatcctcg cccatcagca gcaccctgcc ttcagacggc
    30721 atatccagcc cgcccaaaat atgcagcagc gtcgatttgc cgctgcccga agaaccgatg
    30781 atgccggtac tttcccccgc gaggatttcc aaatccaagc cgtgcagcac ccgaacgtcc
    30841 aaaccgccgt cacggtagcg tttgcccacg ccttcgcatt tcaaaatcaa ctcactcata
    30901 acgcaaagcc tccgccggtt gggtttttga cgcgcgccag ctcgggtaga gcgtcgccac
    30961 gaaagacagt cccaaagaaa tgcaggcaat cagggcaacg tcgcccatat cgacatcgct
    31021 gggcaggtag tcgataaaat aaacctgcga attgataagg tggacaccga gcaggttttc
    31081 aaaaaacgcc acgactctgc cgacgttcca acccaaaagc acgccgcaga ccacacccgc
    31141 cagcgtgccg aaaaagcctg aaaacgcgcc ctgcaccata aaaatcttca tcacgccggc
    31201 aggggaaaga cccaaagtcc gtaaaatcgc aatgtccgcc tgcttttccg taaccgccat
    31261 caccaaggaa gagacaaggt tgaacgccgc cacggcgata atcagcgtca ggatgatgaa
    31321 catcatccgt ttttccaact cgaccgcctc aaaatagctt cgattgctga acgtccaatc
    31381 gcgcacccaa accgtatccc tttgcgcctc cggaatcagc tttgccgtca aggcgggggc
    31441 gttttgcggg tcggcgagtt tcagccgcag ccccgcaact tccttatcca agcggtacag
    31501 tacgcgcgcg tcttggatat gcgtcatcgc caaggagttg tccacttcgt aaacacccgt
    31561 cttaaccaga ccgaccacgg taaactgttt caacctcggt acgactccgg cgggcgtaac
    31621 attgccctcc ggcgtgatga cggtaacttt attgccgact tccgccccca aagcctccgc
    31681 caagccgaca ccgaggataa tgtcaaactc gcccggaatc aggtcttcaa atttgcctgc
    31741 cggcattttg tcgccgtatt ccaccacttt gcgctcttca gacggcaaaa tgccgcgcat
    31801 ctgcacgccc ctgatttcgc ccgcattggc cagcaatgcc tgattggaaa catagggcgc
    31861 ggcagccaaa atacctttgc ggttttcggt aaatcgaagc aggttgcgcc aatccgtatc
    31921 cgtattgtcg atatagccga tttcggcgtg cggcgcgaca ttcaggagct gcccgcgtat
    31981 ttctttctga aagccgttca taaccgacaa gacgacaatc agcgcggtta cgcccaaggc
    32041 gattccggca atcgaaacca tcgtgataaa cgacataaag ccgttgcgct ttttcgccct
    32101 gagatacctc aagcctatcc aagcctctag agaaaacata acgctacctt aaaaatgtct
    32161 gcaaacgtgc cgccccggac ggcggtttgg gggcggcggc aaaagtttat tgtaccgtaa
    32221 aacccaggca gcgtccgaac gcccgagtgc gggggacggg gcggcagagc gggcggaaaa
    32281 cttgcacaac gcgtcaaact gccctatcct ttccttcaga aaaaccgttt cttgaggaaa
    32341 acaatgaata tccgaactgc ttttgctttg tgcgccatcg ccttatccgc cgctgcggct
    32401 gcctacgcca aagaaatcaa aatcgatgcc aacaacacgc cttattccga agccgacgcg
    32461 caaaagctgg cggcaacggc agtcggtatg ggtgttaagg aacctatcag cctgaacggc
    32521 ggcagcggca gcattaccgt gtccggcagc agcgcgacgc agtgcgtgtt caaagtcggc
    32581 aacggaggcg cattgcagat tcaagggcta aactgcaagt aaaccgcccg gaaaaatgcc
    32641 gtctgaaggc ttcagacggc attttgcatt ggcggcgtta tgccccgcct tctttaatca
    32701 ggcggcgttc gtacaccgcc tgcgccagcg ttcccgcatc gacatattcc aattcgccgc
    32761 ccaaggggat gccctgcgac agcctgctga ctttgtaagg caggttttta aaaaactcgg
    32821 acaggacata cgccgtcgca ttgccttctg cggtaaaagc ggttgcaata atgatttctt
    32881 cgacttcccc gccgcccagc cgttgcgcca gcctgtccaa tgcgatggcg gatacgtcca
    32941 ttcccaatgc cgtattgatt tgccccatca ggacgaaata cagcccgtcg tggcagtttg
    33001 ccacttccat attcgacacg tcggcaggca tatgcaccac catcagccgc cgcccgtcgc
    33061 gtgtttcatc ggcacaaata tcgcacaatc cgccttcgca aaacgtgttg cacatcgcgc
    33121 aatggtgaac ctgcttcaat gccgtctgca aggcatccac cagtttttca gcctctttgc
    33181 gcttgtgttg gagcaaatga tacgctatcc gctgtgccga tttcggcccg acgttgggta
    33241 aaaccttcag cgcgtcgatc aatccttgga aggcatcttg ttttttgtgg ctcatcatat
    33301 tccgccgtat gggaaaacgg ccggaatatt ccgaccgtta ttttgtcaac aaaagtgtca
    33361 attactgacc gccgccgttg tcgaccgatt gcgctccttt ggtctgtttg attttgccgt
    33421 tgaaataacg tatcaacaag tcgaaggtat tggcagactg ctgctgcgcc aaagcctgtt
    33481 ttgcaagcgg aagctgtgcg gcgatatcat ccggcggggt tatagcctgt acttcgacaa
    33541 tcacgggtgc cggcagaccg gtcagcctga cgtaggcggg tttgccgttt gtcggttttg
    33601 ctttcagcag ttccgcataa gcctcgggcg gcatggactg ccttgcctgc tgcgcgccca
    33661 aaacggacac ttccgaccat ttcacatcaa ctgccttgcc gccgttcagt tgggtaagca
    33721 cgtcttttgc cttgttttcg gcaagtttgg cggcttcggc acggatataa gcctgacgca
    33781 ccgcatcttt ggcttcggca aacggcaggg ttttctcttc gcggacttct ttggcgcgga
    33841 cgacccacgc gatttcatta ttgatagaca acacttcgga attgtgtttt ttcttcaata
    33901 cgtcgtcgct gaatatggca ttgatcaggt tttcaggcag tccggacatt tgcgcgtcct
    33961 gcctgctcag ccaagtttct tgggtttcga ctttcaaact gctgtttttg gcggcttcgg
    34021 caagcgaagc gggatggttg aacgcgtcat cgctcagctt ttcttttgcc ttattgaagt
    34081 cggcaaccgc ctttttcatt ttcaattcgt tttcgacggc ggctttttcc tgctcgaaag
    34141 aaagtttggc ttcatttgcc ggcaaacgcg ccacgcgctc ttcaaacgca tttttcactt
    34201 ccgtttcact gacggtttgc ttgtctgcaa aatccttcag attcaaggcg acatattcca
    34261 atttgaccgc ctgcggcagc agatagtctt ttttgttcgc attataaaat ttctgcaaat
    34321 cggcttcaga cactttgact tgggcgatga actcgtcggg gttgaaagtg tgcgaacgga
    34381 tggtgcggtt gacctgcgtc agcctgatca gctgttccgc ctgcgcgtcg ccgaccaata
    34441 cgccgttttg gacgaggttt accaaattct gcaaggcaaa ctgatcgcgg atttcttcga
    34501 caaactggtc ttcagacata tggcgttggg aaaggtagcg gtttaaaagc gcgtggtcga
    34561 atttgccgtt tgcgtcgtgg aaattgggat cgtccacgat aatttgcttg atttgttcgg
    34621 aagaaaccga aatgcctaac agcttcgcgc cctgtttcag gtaggcgcgt tgcagcaggg
    34681 attggaacac cgcgtcgcgc gaagggccgc cgccgtccgc ctgttcgttc tgtatggcgt
    34741 tgttgatgga gtggtcgctg attttttcgt cgcccacttg gacgatgtag tcggcacccg
    34801 gatgggatac cgtgctgacc ccgaagccga cgaaggttaa tgcaatcagg cccaaaagga
    34861 cttgggcggg cgttctgtat ttttcgatgg aatggaacat attttaaatc gggatataga
    34921 atgggaaatt caagtcgggt attgtaacgg tttttatccc tgtctgcacg gggcttgccg
    34981 gttgaagatg ccgtcgtagg tttcttcgct gaagccggcg taaaccttgc cgccgcactc
    35041 caatacggga cgcttgatca ggctcggcat ttcggacatc agtttgacgg cctccgctgt
    35101 cgaggacagg gctttttgct gtgtttcggc atcgagtttg cgccagcttg tcccgcgttt
    35161 gttgagcagg gtttccaaag gcacttgttc cagccacgag cagatttccg cttcagacgg
    35221 catctgtttt ttgaaatccc gaaactcaaa ctccaagccg tatccggcaa gtcggttttt
    35281 ggcttttttg accgtatcgc aatttgggat gccgtgaagg actatcattt ggaaaccttt
    35341 tgtctgaaat aataaaacgg atattttact ataagtgtct gaaaatttgc ccgtctgttt
    35401 cagacggcgg ggcggttatg ttacaatccg aaaattcgaa aaatttaatc tcttgttcaa
    35461 taaaggcttt accaatcatg atttctacca acggcatcac catgcagttc ggcgcgaagc
    35521 cgctatttga aaacgtatcc gtcaaattcg gcgaaggcag ccgctacggt ttgatcggcg
    35581 ccaacggctc aggcaaatcc accttcatga aaatcctcgg cggcgatttg gaacagaccg
    35641 ccggtgaagt cgcaattgaa aacggcgtgc gtttgggtaa attgcgccaa gaccagtttg
    35701 cctacgaaga catgcgcgtg ctggacgtgg tgatgatggg gcataccgaa atgtgggcgg
    35761 cgatgaccga acgtgatgcg atttacgcca atcccgaagc caccgaagac gactacatga
    35821 aagccgccga actggaagcc aagttcgccg aatacgacgg ctacaccgcc gaagcgcgtg
    35881 ccgccgaact gttgagcggc gtgggcattt ccgaagattt gcacaatgcg aaaatggcgg
    35941 aagtcgcccc gggcttcaaa ctgcgcgtat tgctggcgca agccctgttc tccaagccgg
    36001 atgtgctgtt gcttgacgaa ccgaccaata acttggacat caacaccatc cgctggctgg
    36061 aaggcgtgtt gaaccaatac gactccacca tgatcatcat ctcgcacgac cgccactttt
    36121 tgaacgaagt ctgcacccac atggcggatt tggactacaa caccatcacc atctatcctg
    36181 gcaactacga cgactacatg ctcgcttccg cccaatcgcg tgagcgcgcc ctgaaagaca
    36241 acgccaaagc caaagagaaa ctgcaagagc tgcaagagtt cgtcgcacgc ttctctgcca
    36301 acaaatccaa agcccgtcag gcaaccagcc gtctgaaaca ggccgacaaa atcaaatcgg
    36361 agatggtcga agtcaaacct tccacccgtc aaaacccgta tatccgtttt gaagccgatg
    36421 aaaaagccaa gctgcaccgt caggctgtgg aagttgaaaa actggcgaaa cgctttgaaa
    36481 cccagttgtt taaaaacctg aacttcatcc ttgaagcggg acaacgcctc gccatcatcg
    36541 gcccgaacgg cgcgggcaaa tccaccctgc tgaaactctt ggccggcgcg tacaaccccg
    36601 aatattcaga cggcctgtta ccggacgaag gcagcatcaa atgggcggaa aaagccagtg
    36661 tcggctacta tccgcaagac catgaaaacg acttcgacgt cgatatggat ttgagcgaat
    36721 ggatgcgcca atgggggcag gaaggcgacg acgaacaagt catccgcggc actttggggc
    36781 gtttgctctt cggcagtaac gatgtcgtga aaaaagtgaa ggttctctcc ggtggtgaaa
    36841 aaggccgtat gctttacggc aaactgttgc tgttgaaacc caatgtctta gtcatggatg
    36901 aaccgaccaa ccacatggac atggaaagca tcgaatcctt gaacatggcg ctggaaaaat
    36961 acaacggcac gctgattttc gtctcgcatg accgtcagtt tgtatcttca ttggctaccc
    37021 aaatcatcga attggacggt aaaggcggat atgaacacta cttgggcgat tacgaaagtt
    37081 acttggagaa aaaaggcgta gcataagcgc acaaaatacc ctccggttga aacaatgccg
    37141 tctgaagccg cttcagacgg cattgttgat aactttaaaa taggaagcat atgcagactt
    37201 acctcgtcgg cggcgccgtc cgcgattatc ttttgggctt gcccgtcaaa gaccgcgatt
    37261 gggtggtcgt cggcgcagac gcacaaacca tgctggcgca aggcttccag ccagtcggca
    37321 aagactttcc cgtgtttctc catcccgaaa cacacgaaga atacgccctc gcccgcaccg
    37381 agcgcaaaac cgccaaaggt tacgccggct tcagtttcca caccgacaaa gacgttacgc
    37441 tggagcagga tttgatgcgc cgcgacctga ccatcaacgc gatggcgcaa gatgcggacg
    37501 gcaagattat cgaccctttc ggcggacaac gggatttggc ggcaggcatt ttgcgccacg
    37561 tttccccggc cttcgccgaa gaccccgtcc gcatcctgcg tactgcccgc tttgccgcgc
    37621 gttacaagtt tgaaatcgcc gaagaaacca taaagctgat gcggcagatg gtggaaaacg
    37681 gcgaagcgga cgcattggtt gccgaacgcg tctggcagga gtttgcgaaa ggtttgatgg
    37741 aaaaaaatcc gcgcaaaatg attgaagtgt tgcgcgaatg cggcgcgctc aaagtcttgc
    37801 tgcccgaagt caatgccctc ttcggcgtgc cgcaacgcgc cgactaccat cccgaaatcg
    37861 acagcggcat ccataccctg atgacgctgc aacgcgccgc cgatatgggt ttgagcctgc
    37921 ccgaacgcta tgccgccctg ctgcacgact tgggcaaagc caaaacaccg tccgacatcc
    37981 tgccgcgcca ccacggacac gacctcgccg gtgtcgaacc cgtgcgcgaa gtcaatcagc
    38041 ggctgcgtgc gccgaaacat tgcgccgagc ttgccgaact tgtctgccgt tggcacatta
    38101 ttttccacca agtcggacag cttaaaagcc aaaccattct gaacgttttg aaaaaaaccg
    38161 acgctttcag acgccccgaa cgctttcaga cggcattgaa cgtctgcatt gccgacacgc
    38221 aaggccgtct gaaccgcgaa cacacgccct acccgcaacg cgcgcactgg ctcgccttac
    38281 tcgaagccgc caatcaggcg gattcgggca aaatcgccgc cgaatgccgc tcgcagggaa
    38341 aagcgcacct tatcgccgaa caaatcgacc gggcgcggct ggcacaaatc gccccattgc
    38401 aaaaagcgtt tcgagcggcg caagacaaaa cagaaaaaca ttaaaacgtc caatgcagcc
    38461 acttttatag tggattaaca aaaatcagga caaggcgacg aagccgcaga cagtacagat
    38521 agtacggcaa ggcgaggcaa cgctgtactg gtttttgtta atccactata aagttttgag
    38581 gacgataccc aatccaagct ttgcaacagc cgccgccata tccgctataa ttcacgcttc
    38641 agccattccg cccccgacat aaaatcatga ccctgaaaac cgatttattg cctaaaatca
    38701 acaacgaaga ttatcaacgc ctcatcctca aacacagtgc ggaatttagc ggtggcgaaa
    38761 tccgcctatt gaacgaaatc ctcgaaaaat tcaatttcga cgttgttcag gcgcaggcgt
    38821 tggcgcaggc ggtgatgcag caagtccgct tcgaccccaa cgcctatcac atcgacagcg
    38881 acgacgaaga caccacaggc atctgcccac actgcatcaa cccgcctatg ccgcccctgc
    38941 gcgactatct cgtttggcgc gaaacgcgcg ggtaaaacgc ttttgaccgt tatcttttca
    39001 atgccgtctg aaacgccgcc gaccgttcag acggcatacc cgacaaaggg aacactatgc
    39061 tgcaaaccga caacctgact gccgctcaac cgcaacgcat tgttgccgcc caaaccgcct
    39121 ccgcacagga agaactgctc gaacgcgccc tccgccccaa aacgctggac gactatatcg
    39181 ggcagcataa agccaaagaa cagctcgcca ttttcatcca agccgccaaa aaacgcggcg
    39241 aagcactcga ccacgttttg ctcttcggcc cgcccggact gggtaaaacc acactggcgc
    39301 acatcatcgc caaagaattg ggcgtaaatt tgcgccaaac cagcggcccc gtcctcgaac
    39361 gcgccggcga tctcgccgcc cttttgacca accttgatcc gcacgacgta ttgtttatcg
    39421 acgaaatcca ccgcctcagc cctgttgtcg aagaaatcct ctaccccgcg cttgaagact
    39481 accggctcga cattatgata ggcgaagggc ccgccgcccg ttccgttaaa atcgacctgc
    39541 cgcccttcac gcttgtcggc gcgaccaccc gcgccggtat gctgaccaat ccgttgcgcg
    39601 accgcttcgg catcgtctcc cgcctcgagt tttacgaaaa ccgcgacctt gccaccatcg
    39661 tcagccgttc ggcacaactc ctgcaactcg atatgtccga agaaggcgcg gaagaaatcg
    39721 ccaaacgcag ccgcggtacg ccgcgcatcg ccaaccgcct gttgcgccgc gtgcgcgatt
    39781 tcgccgacgt gaaaaacaac ggcacaatcg acggcggcat cgccgatgcc gctttaagta
    39841 tgctggacgt ggacgtgcag gggctggacg tgatggacag gaaattcctc gaagccgttt
    39901 tgcacaaatt cggcggcggc ccggtcggtt tggacaatgt tgccgccgcc atcggcgaat
    39961 caacagacac catcgaagac gttatcgaac cctaccttat ccaacaaggc ttcctgcaac
    40021 gcaccccgcg cggcaggatg gcgaccgaac gcgcctacct gcatttcggg ctgcccgtcg
    40081 aaaaataacg caatgccgtc tgaaacagag ctaattttca gacggcattt ctatttcaat
    40141 cattggcgca aggttcagcc tgccgctttt ttccagttcc gccctcatcg catcaatcac
    40201 cgccttatag tctggtttgc cgaaaatcgc agaaccggca acaaaggtat ccgcaccagc
    40261 tcgggcaacg gcggcaatat tgtcggtttt gatgccgccg tccacttcga tggcgatgtg
    40321 ccgcccgctt tgtgcttcgt accgatccag catcgcccgc acccggcgga ttttttcaag
    40381 ggtgtgcggg atgaagcttt gtccgccgaa tccggggttg accgacatca gcaaaaccat
    40441 atccagcctg tccaatacgt tttccaacag atatacgggc gttgccggat tcaacaccag
    40501 ccccgcctga cagcccatgt cccgaatcag gctcaagctg cggtcgatat ggcggctcgc
    40561 ttcgggatgg aacgtgatga ttgatgctcc tgctttggca aacgactgaa tcaggtcgtc
    40621 aacgggttcg accatcagat gcacatcgat cggcacgctt gcataaggct tcaacgccgc
    40681 gcaaaccata gggccgaagg tcaggttcgg cacataatgg ttgtccatca cgtcaaaatg
    40741 gatcagatct gcacctgccg caatgacgct ttccacctct tcgccaagcc gtgcaaaatc
    40801 tgccgataaa atgctgggtg cgatacggta agtagtcatg tttttttcct tcaatatc
//
LOCUS       DBBZXU010000005        38258 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.005, whole genome shotgun sequence.
ACCESSION   DBBZXU010000005 DBBZXU010000000
VERSION     DBBZXU010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.005"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..306
                     /locus_tag="ACJJDE_000223"
                     /pseudo
     CDS             1..306
                     /locus_tag="ACJJDE_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684347.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(363..1421)
                     /gene="trpD"
                     /locus_tag="ACJJDE_000224"
     CDS             complement(363..1421)
                     /gene="trpD"
                     /locus_tag="ACJJDE_000224"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HGG7540218.1"
                     /translation="MITPQQAIERLISNNELFYDEMTDLMRQIMSGKVPPEQIAAILT
                     GLRIKVETVSEITAAAAVMREFAAKVPLEDAEGLVDIVGTGGDGAKTFNISTTSMFVA
                     AAAGAKVAKHGGRSVSSSSGAADVVEQMGANLNLTPEQVAQSIRQTGIGFMFAPNHHS
                     AMRHVAPVRRSLGFRSIFNILGPLTNPAGAPNQLLGVFHTDLCGILSRVLQQLGSKHV
                     LVVCGEGGLDEITLTGKTRVAELKDGKISEYDIRPEDFGIETRRNLDEIKVANTQESL
                     LKMNEVLEGREGAARDIVLLNTAAALYAGNVAASLSDGISAAREAIDSGRAKSKKEEF
                     VGFQPQQRCHFLGKMELG"
     gene            complement(1485..2075)
                     /locus_tag="ACJJDE_000225"
     CDS             complement(1485..2075)
                     /locus_tag="ACJJDE_000225"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HGG7540219.1"
                     /translation="MLLFIDNYDSFTYNIVQYFAELGQEVAVRRNDDITLEEIEALNP
                     QYLVIGPGPCSPKEAGISVAAMRHFAGRLPIMGVCLGHQTIGEAFGGRIVRAKTLMHG
                     KVSPVSHSGKGMFKGLPNPVTCTRYHSLVIERGTLPECLEITAWTEDGEIMGVRHKEY
                     AVEGVQFHPEALLTEHGHDMLNNFLIEFQNFKPQKI"
     gene            2496..4772
                     /gene="znuD"
                     /locus_tag="ACJJDE_000226"
                     /gene_synonym="tdfJ"
     CDS             2496..4772
                     /gene="znuD"
                     /locus_tag="ACJJDE_000226"
                     /gene_synonym="tdfJ"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_118820519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc receptor ZnuD"
                     /protein_id="HGG7540220.1"
                     /translation="MAQITLKPIVLSILLISTPLLVLAHETEQSVDLETVSVVGKSRP
                     RATSGLLHASTSSDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTG
                     RRIKVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVTD
                     GKIPEKMPENGVSGEAGLRLSSGNLEKLTSAGINIGLGNNFVLHTEGLYRKSGDYAVP
                     RYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVVYSDRRDQYGLPAHSHEYDDCHADI
                     IWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGSHDGDGAHAHTHSGRPWIDLRNKR
                     YELRAEWKQPLPGFEALRVHLNRNDYHHDEKAGDAVENFFNNKTHNARIELRHQPIGR
                     LKGSWGVQYLGQKSSALSAIPETVQQPMLIDNNVRHYSFFGVEQANWDNFTLEGGVRV
                     EKQKASIRYDKALIDRENYYNQPLPDLGAHRQTARSFALSGNWYFTPHHKLSLTASHQ
                     ERLPSTQELYAHGKHVATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNHF
                     GNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGD
                     YVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDY
                     YRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYIKTDNLLNQSVYAHSSFL
                     SDTPQMGRSFTGGVNVKF"
     gene            complement(5433..6230)
                     /locus_tag="ACJJDE_000227"
     CDS             complement(5433..6230)
                     /locus_tag="ACJJDE_000227"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HGG7540221.1"
                     /translation="MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTV
                     FALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQ
                     KSPADCTVTEVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
                     LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVTGVSTVLARLPLAAP
                     QIESEPESEPALQTAPVETAATPSAEQRQIEAAAAKIQAAVQDVLKD"
     gene            6385..9231
                     /gene="uvrA"
                     /locus_tag="ACJJDE_000228"
     CDS             6385..9231
                     /gene="uvrA"
                     /locus_tag="ACJJDE_000228"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HGG7540222.1"
                     /translation="MCNHHPRHSHDNDTIRIRGARTHNLKNIDLDIPRHKLVVITGLS
                     GSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQMMDKPDVDLIEGLSPAISIEQKSTS
                     HNPRSTVGTVTEIHDYLRLLYARVGTPYCPEHNLPLSSQTVSQMVDAVLKLPEDTRVM
                     ILAPAVRERKGEFVDFFADLQAQGFARVRVDGEVYQLDEVPKLEKNIKHNIDVVIDRV
                     KVKADIKQRLAESFETALRHGNERALAIEMDSGEEHWFSARFACPVCSYSLPELEPRL
                     FSFNNPMGSCPTCDGLGNTNFFDSEKVVAHPELSLASGAIDGWDKRNQFYFQMIQSLA
                     RHYGFDVQAAWETLPAKIKKVVLHGSGKEVIDFTYLSERGTTFNRSHAFEGIIPNLER
                     RYRETDSETVREKLREYQNHRACPSCGGARLRKEARYVYVGGEPLHEVSAWPLTKTHR
                     FFETLDLDGNKKQIAEKILKEITERLGFLINVGLDYLNLSRSAETLSGGEAQRIRLAS
                     QIGSGLTGVMYVLDEPSIGLHQRDNDRLLATLKRLRDLGNSVIVVEHDEDAIREADFV
                     VDMGPGAGEHGGNVLIADTPENVAKCENSVTGQYLSGKKSIAVPSERTPVNPDRMLVL
                     KGARGNNLKNVTLELPLGLITCITGVSGSGKSTLINDTLAKITARELNRAQEEPAPYD
                     DIRGLEHLDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAGVPLSRERGYNVGRFS
                     FNVKGGRCEACQGDGVIKVEMHFLPDVYVPCEVCHGKRYNRETLEIQYKGKNISQVLD
                     MTVEEAREFFDAVPTVSRKLQTLMDVGLGYIRLGQSATTLSGGEAQRVKLALELSKRD
                     TGRTLYILDEPTTGLHFADIALLLEVIDRLKGKGNSIVIIEHNLDVIKTADWIVDLGP
                     EGGDGGGRIIASGSPEEVAKVKGSYTGKYLKNIL"
     gene            complement(9263..9433)
                     /locus_tag="ACJJDE_000229"
     CDS             complement(9263..9433)
                     /locus_tag="ACJJDE_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540223.1"
                     /translation="MFLGIFIALSGILTLLEMFNVISSDMKWGMPLMFTCLGFSIIFD
                     SFKAKQNRKQKE"
     gene            complement(9448..9633)
                     /locus_tag="ACJJDE_000230"
     CDS             complement(9448..9633)
                     /locus_tag="ACJJDE_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540224.1"
                     /translation="MTNKIKPGQNTGNNGGIYQEIGSRGGRKDNYATIKDNQKAPPTQ
                     NPGSSWIQIKRTPDSSR"
     gene            complement(9649..9918)
                     /locus_tag="ACJJDE_000231"
     CDS             complement(9649..9918)
                     /locus_tag="ACJJDE_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540225.1"
                     /translation="MKIKFAHLRHPAVGGGYINFAVFDAKSTNGNHSVVLKELTTEAR
                     RNGLKIDQSALIFEQHGRTQFYGDKNLVDFLSANWYPQWTHTLTI"
     gene            10074..10997
                     /locus_tag="ACJJDE_000232"
     CDS             10074..10997
                     /locus_tag="ACJJDE_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WYL domain-containing protein"
                     /protein_id="HGG7540226.1"
                     /translation="MKTIAPSHIKPLMPELNQSQRNRIIFIDFYLCFLGKINRKDLMQ
                     AFQISPAVATRDFALYCSSFSKNLRFDTKSKFYLSTEDFEPQFPHSFENAIKILNGSL
                     IFDIDSQHQPLLPFDLPPVLINPDVLIFSKISKALSLKKPLKISYHSISSGLSEKVIV
                     PLALVNDGFRWHLRAFDRTKNRFADFVLTRIIQANILLAENIEENETINNDIDWNRIV
                     KIELVPHPNHDEAKKVIEMDFGMTNGKLELALRASNIGYVLQQWRVDCSSDHHIDDPA
                     FRLWLLDNLVLYGINNAEHLAPAFDKKRSKP"
     gene            complement(11224..11523)
                     /locus_tag="ACJJDE_000233"
     CDS             complement(11224..11523)
                     /locus_tag="ACJJDE_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540227.1"
                     /translation="MKRQTVNQATACVRTAHTLHVDFEVPCNSQVGCVAQPRTRCWVC
                     RLRLAAAETPEEKAKDAAEEAKEEAKDAAEEAKEEAKDAAEDAKEAAEDAKEEAK"
     gene            11772..12101
                     /locus_tag="ACJJDE_000234"
     CDS             11772..12101
                     /locus_tag="ACJJDE_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7540228.1"
                     /translation="MDVQKQYSFETVAVCVLPNHIHAIWTLPPDDADYSLLRRLIKTK
                     FSAYSPYTKNLSAGKQRQHERGIWQRRFYGHTVRDETDLQRCADYIHSNPIKQKMSRA
                     KTESCKK"
     gene            complement(12167..12307)
                     /locus_tag="ACJJDE_000235"
     CDS             complement(12167..12307)
                     /locus_tag="ACJJDE_000235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540229.1"
                     /translation="MPSETGNRVSDGILFVISKRGSLNIPTLFLPFEAGRIFIGQTGA
                     NP"
     gene            complement(12336..13226)
                     /gene="sucD"
                     /locus_tag="ACJJDE_000236"
     CDS             complement(12336..13226)
                     /gene="sucD"
                     /locus_tag="ACJJDE_000236"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016655272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HGG7540230.1"
                     /translation="MSVLINKDTKVLVQGFTGKNGTFHSEQALAYGTKVVGGVTPGKG
                     GQTHLNLPVFNTMKEAVKETGADASVIYVPAPFVLDSIVEAVDSGVGLVVVITEGVPT
                     LDMLKAKRYLETNGNGTRLVGPNCPGVITPGECKIGIMPGHIHTPGRIGIISRSGTLT
                     YEAVAQTTKLGLGQSTCIGIGGDPIPGMNQIDALKLFQEDPDTDAIIMIGEIGGTAEE
                     EAAEYIQSNVSKPVVGYIAGVTAPKGKRMGHAGAIISGGKGTAEEKFAAFEKAGIAYT
                     RSPAELGTTMLEVLKTKGLA"
     gene            complement(13237..14448)
                     /gene="sucC"
                     /locus_tag="ACJJDE_000237"
     CDS             complement(13237..14448)
                     /gene="sucC"
                     /locus_tag="ACJJDE_000237"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HGG7540231.1"
                     /translation="MEANSGHSTNLKEKSMNLHEYQAKELLASYGLPVQGGILAHNGE
                     EAAAAYDKLGGKFAVVKAQVHAGGRGKAGGVKVVKSREEAKEVAESLIGTNLVTYQTD
                     ANGQPVNSVLVCEDMYPVQTELYLGAVVDRSTRRVTFMASTEGGVEIEKVAAETPEKI
                     FKVTVDPLVGLQPCQAREVAFQLGLKDKQINEFVKLMTGAYKAFVENDFALFEVNPLA
                     VRENGALACVDGKIGIDSNALYRLPKIAELRDKSQENERELKASEFDLNYVALEGNIG
                     CMVNGAGLAMATMDIIKLKGGQPANFLDVGGGATKDRVVEAFKLILEDKSVKGVLINI
                     FGGIVRCDMIAEAIVAAVKEINVDVPVVVRLEGNNAELGAKILNESGLKLTSADGLND
                     AAEKIVAAVNA"
     gene            complement(14502..14789)
                     /locus_tag="ACJJDE_000238"
     CDS             complement(14502..14789)
                     /locus_tag="ACJJDE_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540232.1"
                     /translation="MNKEIVGIFFIPMGIISMCMAALWQMYVMMTETYTLNRFKDKEL
                     VWRVALLFISFSLAVYLLCPNSRKKGIVFFILGGGGAAMYLLARMWLPFSK"
     gene            complement(14914..16347)
                     /gene="lpdA"
                     /locus_tag="ACJJDE_000239"
     CDS             complement(14914..16347)
                     /gene="lpdA"
                     /locus_tag="ACJJDE_000239"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7540233.1"
                     /translation="MSQYDVVVIGAGPGGYVAAIRAAQLGFKTACVDAGVNKAGNAPA
                     LGGTCLNVGCIPSKALLQSSEHFHAAQHEFAEHGITVGDIKFDAAKMIERKDAIVTKL
                     TGGVKFLFQKNKVTSLFGTASFAGKNGDAYQIEVDNKGEKTVIEAKHVIVATGSVPRP
                     LPQVAIDNVNVLDNEGALNLTEVPAKLGVIGSGVIGLEMGSVWNRVGAEVTILEAAPT
                     FLAAADQQIAKEAFKYFTKEQGLNIELGVKIGDIKSEGKGVSVAYETAAGEAKTEVFD
                     KLIVAIGRIPNTKGLNAEAVGLEKDERGFIKVDGECRTNLPNVWAIGDVVRGPMLAHK
                     ASDEGVAVAERIAGQKPHIDFNNVPFVIYTDPEIAWVGKTEEQLKAEGVEYKKGTSGF
                     GANGRALAMGKAKGTVKVLADAKTDRILGVHMIGPVVSELVTEGVTALEFFASSEDIA
                     RIIHAHPTLSEVVHEAALAADKRALHG"
     gene            16549..16659
                     /locus_tag="ACJJDE_000240"
                     /pseudo
     CDS             16549..16659
                     /locus_tag="ACJJDE_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(16711..17877)
                     /gene="odhB"
                     /locus_tag="ACJJDE_000241"
     CDS             complement(16711..17877)
                     /gene="odhB"
                     /locus_tag="ACJJDE_000241"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045252 - oxoglutarate dehydrogenase
                     complex [Evidence IEA];
                     GO_function: GO:0004149 - dihydrolipoyllysine-residue
                     succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HGG7540234.1"
                     /translation="MIIDVKVPMLSESVSEGTLLEWKKKVGEAVARDEILIDIETDKV
                     VLEVPSPQAGVLVEIVAQDGETVVADQVLARIDTAATAAAEAPVAAPAEAAPAAAPAA
                     AQNNAAMPAAAKLAAETGVDVNALQGSGRDGRVLKEDVQNAAAKPAAAAAPAGARPEE
                     RVPMSRLRARVAERLLASQQENAILTTFNEVNMKPIMDLRAKYKEKFEKEHGVKLGFM
                     SFFVKAAVAALKKYPVVNASVDGKDIVYHGYFDIGIAIGSPRGLVVPILRDADQMSIA
                     DIEQAIVDYAKKAKDGKIAIEDLTGGTFSITNGGTFGSMMSTPIINPPQSAILGMHAT
                     KERAVVENGQVVVRPMMYLALSYDHRIIDGREAVLTLVAIKDALEDPARLLLDL"
     gene            complement(17977..20805)
                     /locus_tag="ACJJDE_000242"
     CDS             complement(17977..20805)
                     /locus_tag="ACJJDE_000242"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HGG7540235.1"
                     /translation="MMDEKLNFSYLFGSNAPYIEELYEAFLENPDAVDEKWKQYFTDL
                     SKQPGTVAVDVAHTPIRESFVTLAKKKIASAVAGGADEAMLKKQVSVLRLISAYRIQG
                     VGAAQLDPLKRIPPRDIEALDPKFHGLSDADMTLQFNMGEGDFANRGKLPLSQIISNL
                     KQTYCGHIALEYIYIPNTEERRWVRNYFESVLSTPHYNADQKRRILKEMTAAETLERY
                     LHTKYVGQKRFGVEGGESAIAGLNYLIQNASKDGVEEVIIGMAHRGRLNVLVNILGKK
                     PGDLFAEFEGRAEIKLPSGDVKYHMGFSSDIATPHGPMHVSLAFNPSHLEIVNPVVEG
                     SARAKQKRLGENGRDKVLPVLIHGDSAFIGLGVNQATFNLSKTRGYTTGGTVHIVINN
                     QIGFTTSDIRDTRSTVHCTDIAKMVSAPVIHVNGDDPERVCFAIQAALDYRKKFHKDI
                     VIDVVCYRKWGHNEGDDPTLTQPMMYKKVSQHPGARALYTEQLIAEGVVTQAEADGYI
                     QAYRDALDKGEHVEQTTLSNFQRTQIDWSKYQGKDWREHIETGLPAADIERLTEKFTA
                     VPEGFALHPTAKRVIEARKAMASGKQAIDWGMAETLAYASLVTKGHGVRISGEDSGRG
                     TFSHRHAVLHDQKREKWDDGTYVPLRHMGEGMGEFLVIDSILNEEAVMAFEYGFACSA
                     PDKLTIWEAQFGDFANGAQVTIDQFLSSGETKWGRLCGLTTILPHGYDGQGPEHSSAR
                     VERWLQLCSENNMQVIMPSEASQMFHLLQRQVLGSYRKPLVIFMSKRLLRFKGAMSPL
                     ENFTEGSTFRPVIGDTAERASNGSVKRVVLCAGQVYYDLEAGRTERKLEDDVAIVRVE
                     QLYPFPYEEVKAELAKYPNAKSVVWAQEEPKNQGAFYQIRHRIEDVISEEQKLSYAGR
                     PSSASPAVGYSSKHIAQLKQLVEDALAL"
     gene            complement(21010..22293)
                     /gene="gltA"
                     /locus_tag="ACJJDE_000243"
     CDS             complement(21010..22293)
                     /gene="gltA"
                     /locus_tag="ACJJDE_000243"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HGG7540236.1"
                     /translation="MSKSIKLNVPGQAGLELPVLEASIGHDVVDIRGLTKNTGLFSFD
                     PGFVSTASCESKITYIDGDQGLLYYRGYPIEQLAEKSDYLEVCYLLIYGELPTPEQKA
                     EFDNTVRRHTMVHEQLTWFFRGFRRDAHPMAMMVGVVGALSAFYQDSLDISNPEHRKI
                     AIYRLISKIPTIAAMCYRYSNGLPFNYPKNNLSYSENFLHMMFATPCEDYKPNPVLAR
                     ALDRIFILHADHEQNASTSTVRLAGSSGANPFACIAAGIACLWGASHGGANEAVLKML
                     DEIGDVSNVAAYMEGVKQRKYRLMGFGHRVYRNMDPRASIMRETCYEVLKELGLEDSP
                     KFKLAMELEQIALKDPFFIERKLYPNVDFYSGIVLSALGIPTEMFTVIFALSRSVGWI
                     SHWHEMISDPSLKIGRPRQLYTGSERRDYVPAGER"
     gene            complement(22405..22653)
                     /locus_tag="ACJJDE_000244"
     CDS             complement(22405..22653)
                     /locus_tag="ACJJDE_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HGG7540237.1"
                     /translation="MMVFDDIAKRKIRFQTRRGLLELDLIFGRFMEKEFEHLSDKELS
                     EFSEILEFQDQELLALINGHSETDKGHLIPMLEKIRRA"
     gene            complement(22657..23364)
                     /locus_tag="ACJJDE_000245"
     CDS             complement(22657..23364)
                     /locus_tag="ACJJDE_000245"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (quinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HGG7540238.1"
                     /translation="MEKMSFEIYRYNPDVDAKPYMQRYELELEPTDVKLLDALVRLKA
                     QDDTLSFRRSCREGICGSDGMNINGKNGLACLTDLRGLKQPVKIRPLPGLPVIRDLIV
                     DMTQFFKQYHSVKPYVVNDNPIDADKERLQTQEERKELDGLYECILCACCSTACPSFW
                     WNPDKFVGPSGLLNAYRFIADSRDTITNERLDDLNDPYRLFRCHTIMNCVDVCPKHLN
                     PTRAIGKIKEIMLKRAV"
     gene            complement(23484..25247)
                     /gene="sdhA"
                     /locus_tag="ACJJDE_000246"
     CDS             complement(23484..25247)
                     /gene="sdhA"
                     /locus_tag="ACJJDE_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HGG7540239.1"
                     /translation="MGFPVRKFDAVIVGGGGAGLRAALQLSKSGLNCAVLSKVFPTRS
                     HTVAAQGGISASLGNVQEDRWDWHMYDTVKGSDWLGDQDAIEFMCRAAPEAVIELEHM
                     GMPFDRVESGKIYQRPFGGHTAEHGKRAVERACAVADRTGHAMLHTLYQQNVRANTQF
                     FVEWTAQDLIRDENGDVVGVTAMEMETGEVYIFHAKAVMFATGGGGRIYASSTNAYMN
                     TGDGLGICARAGIPLEDMEFWQFHPTGVAGAGVLITEGVRGEGGILLNADGERFMERY
                     APTVKDLASRDVVSRAMAMEIYEGRGCGKNKDHVLLKIDHIGAEKIMEKLPGIREISI
                     QFAGIDPIKDPIPVVPTTHYMMGGIPTNYHGEVVVPQGEDYEVPVKGLYAAGECACAS
                     VHGANRLGTNSLLDLVVFGKAAGDSMIKFIKEQSDWKPLPANAGELTRQRIERLDNQT
                     DGENVDALRRELQRSVQLHAGVFRTDEILSKGVREVMAIAERVKRTEIKDKSKVWNTA
                     RIEALELDNLIEVAKATLVSAEARKESRGAHASDDHPERDDENWMKHTLYHSDTNTLS
                     YKPVHTKPLSVEYIKPAKRVY"
     gene            complement(25250..25591)
                     /gene="sdhD"
                     /locus_tag="ACJJDE_000247"
     CDS             complement(25250..25591)
                     /gene="sdhD"
                     /locus_tag="ACJJDE_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HGG7540240.1"
                     /translation="MVERKLTGAHYGLRDWVMQRATAVIMLIYTVALLVVLFSLPKEY
                     SAWQAFFSQTWVKVFTQVSFIAVFLHAWVGIRDLWMDYIKPFGVRLFLQVATIVWLVG
                     CLVYSVKVIWG"
     gene            complement(25585..25962)
                     /gene="sdhC"
                     /locus_tag="ACJJDE_000248"
     CDS             complement(25585..25962)
                     /gene="sdhC"
                     /locus_tag="ACJJDE_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045273 - respiratory chain complex II
                     (succinate dehydrogenase) [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HGG7540241.1"
                     /translation="MSVKPRPVYLDLPNIRLPIPGIVSILHRISGVGLFIMLPFLLYF
                     LSGTLSQESAFETYRAIVSHPLVKLVLIGVLWAYLHHSLAGIRFLFLDAHKGLELNTA
                     RNTAKAVFASALVLTVVLGALLW"
     gene            complement(26245..27648)
                     /locus_tag="ACJJDE_000249"
     CDS             complement(26245..27648)
                     /locus_tag="ACJJDE_000249"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HGG7540242.1"
                     /translation="MKKIQADVVVIGGGTAGMGAFRNARLHSDNVYLIENNVFGTTCA
                     RVGCMPSKLLIAAAEARHHALHTDPFGVHLDKDSIVVNGEEVMQRVKSERDRFVGFVV
                     ADVEEWPADKRIMGSAKFIDEHTVQIDDHTQITAKSFVIATGSRPVILPQWQSLGDRL
                     IINDDVFSWDTLPKSVAVFGPGVIGLELGQALHRLGVKVEIFGLGGIIGGISDPVVSD
                     EAKAVFGEELKLHLDAKTEVKLDADGNVEVYWEQDGEKGVFVAEYMLAAVGRRPNVDN
                     IGLENINIDKDARGVPVADPLTMQTSIPHIFIAGDASNQLPLLHEAADQGKIAGDNAG
                     RYPNIGGGLRRSTIGVVFTNPQIGFVGLKYAQVTAQYQPDEFVIGEVSFKNQGRSRVM
                     LVNKGHMRLYAEKATGRFIGAEIVGPAAEHLAHLLAWAHQMKMTVPQMLDMPFYHPVI
                     EEGLRTALRDADAKLKA"
     gene            complement(27897..28634)
                     /locus_tag="ACJJDE_000250"
     CDS             complement(27897..28634)
                     /locus_tag="ACJJDE_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redoxin family protein"
                     /protein_id="HGG7540243.1"
                     /translation="MALQDRTGQKVPSVVFRTRVGDTWKDVSTDDLFKGKKVVVFSLP
                     GAFTPTCSSSHLPRYNELFGAFKENGVDAIYCVSVNDTFVMNAWAAEEESDNIYMIPD
                     GNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVNDGVVEKMFIEPEEPGDPFKVSDADTM
                     LKFVAPNWKAQESVAIFTKPGCQFCAKAKQALQDKGLSYEEIVLGKDATVTSVRAITG
                     KMTAPQVFIGGKYIGGSEDLEAYLAKN"
     gene            complement(28910..31186)
                     /gene="metE"
                     /locus_tag="ACJJDE_000251"
     CDS             complement(28910..31186)
                     /gene="metE"
                     /locus_tag="ACJJDE_000251"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HGG7540244.1"
                     /translation="MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLRE
                     KNWKHQVAANADFVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGN
                     KDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPL
                     TFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALAVDLPKEWV
                     EAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKALPVDGLHIDLVRAPEQLDAFADY
                     DKVLSAGVIDGRNIWRANLNKVLETVEPLQAKLGDRLWISSSCSLLHTPFDLSVEEKL
                     KANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRA
                     DVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARSAFK
                     KGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQY
                     GWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFV
                     RNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAG
                     ESFRLSSAGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEF
                     QYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLE
                     QLQVMMNVTHKLRAELAK"
     gene            complement(31324..32202)
                     /gene="metF"
                     /locus_tag="ACJJDE_000252"
     CDS             complement(31324..32202)
                     /gene="metF"
                     /locus_tag="ACJJDE_000252"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HGG7540245.1"
                     /translation="MNYAKEINALNNSLSDLKGDINVSFEFFPPKNEQMETMLWDSIH
                     RLQTLHPKFVSVTYGANSGERDRTHGIVKRIKQETGLEAAPHLTGIDASPDELRQIAK
                     DYWDSGIRRIVALRGDEPAGYEKKPFYAEDLVKLLRSVADFDISVAAYPEVHPEAKSA
                     QADLINLKRKIDAGANHVITQFFFDVERYLRFRDRCVMLGIDVEIVPGILPVTNFKQL
                     GKMAQVTNVKIPSWLSQMYEGLDDDQGTRNLVAASIAIDMVKVLSREGVKDFHFYTLN
                     RSELTYAICHILGVRP"
     gene            32402..32677
                     /locus_tag="ACJJDE_000253"
     CDS             32402..32677
                     /locus_tag="ACJJDE_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HGG7540246.1"
                     /translation="MKPNIHPDNYRTVLFFDSSANEGWLIRSCAETHGKTMVWTDGKE
                     YPLFSLDTSSASHPVYTGKQRNVNTEGRASKFNQRFQSVMSSFRKDK"
     gene            32677..32802
                     /gene="ykgO"
                     /locus_tag="ACJJDE_000254"
     CDS             32677..32802
                     /gene="ykgO"
                     /locus_tag="ACJJDE_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HGG7540247.1"
                     /translation="MQVLSSLKTAKQRHRDCQIVRRRGKVYVICKSNPRFKARQR"
     gene            complement(32908..33108)
                     /locus_tag="ACJJDE_000255"
     CDS             complement(32908..33108)
                     /locus_tag="ACJJDE_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540248.1"
                     /translation="MIGRLFRIFFFFALAALIMNRLFSRRQKRALREVAEISARVLLG
                     AAAATLFWYLFMLYFKHIPDSY"
     gene            33251..34390
                     /locus_tag="ACJJDE_000256"
     CDS             33251..34390
                     /locus_tag="ACJJDE_000256"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HGG7540249.1"
                     /translation="MSQNASVGIVMPQKIPFEVPLVLENGKTLPRFDLMIETYGELNA
                     EKNNAVLICHALSGNHHVAGRHSAEDKYTGWWDNMVGPGKPIDTERFFVVGLNNLGGC
                     DGSSGPLSINPETGREYGADFPLVTVKDWVKSQAALADYLSIGQWAAVVGGSLGGMQA
                     LQWAISYPERVRHALVIASAPKLSTQNIAFNDVARQAILTDPDFNEGHYRSRNTVPAR
                     GLRIARMMGHITYLAEDGLGKKFGRDLRSNGYQYGYGVEFEVESYLRYQGDKFVGRFD
                     ANTYLLMTKALDYFDPAADFGDSLTRALQNVKAKFFVASFSTDWRFAPERSHELVKAL
                     IAAQKSVQYIEVKSAHGHDAFLMEDEAYMRAVAAYMNNVYKGCQQ"
     gene            34387..34968
                     /gene="metW"
                     /locus_tag="ACJJDE_000257"
     CDS             34387..34968
                     /gene="metW"
                     /locus_tag="ACJJDE_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine biosynthesis protein MetW"
                     /protein_id="HGG7540250.1"
                     /translation="MNLRDDLQLIYDRIPEGSRVLDLGCGDGELLAALVEHKKCSGYG
                     IEIDTDSVIAAMSRGVNVIQADLEEGLTAFNDQSFDVIVLSQTIQAMQNTEKILRCLM
                     RVAKQAIVSFPNFGYWRNRVQIALGGHMPVSERMPYHWYDTPNIHWCTLKDFDLLCAK
                     NNIRVLERAVMTGNRQVKHFPNLLGSLAFYRVG"
     gene            35085..35930
                     /locus_tag="ACJJDE_000258"
     CDS             35085..35930
                     /locus_tag="ACJJDE_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NMB0938 family lipoprotein"
                     /protein_id="HGG7540251.1"
                     /translation="MKNKTSSLLLWLAAIMLTACSPNKEDKTKETGASAASSPASAAS
                     SSAPQTDLQPAASAPDNVKQAESAPPSNCTDLHPATGIDDLMQQIAEHIDSDCLFALS
                     HHELETRFGLPDSGYDNIQRLLFPDIRPEDPDYHQKIILAIEDLRYGKRTISRQAQDA
                     LMEQERRLREATLLLTQGSEETRGQGEEPKRTRYFEVSATPAYSSRHNNGLGGNFQYI
                     GQLPGYLKIHGEMLENQSLFRLSNRERNPDKPFLDIHFDENGKITRIVVYEKNIYFNP
                     NLGRR"
     gene            complement(35979..36539)
                     /gene="efp"
                     /locus_tag="ACJJDE_000259"
     CDS             complement(35979..36539)
                     /gene="efp"
                     /locus_tag="ACJJDE_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HGG7540252.1"
                     /translation="MKTAQELRAGNVFMVGNDPMVVQKTEYIKGGRSSAKVSMKLKNL
                     LTGAASETIYKADDKFDVVILSRKNCTYSYFADPMYVFMDEEFNQYEIEADNIGDALK
                     FIVDGMEDQCEVTFYEGNPISVELPTIIVREVEYTEPAVKGDTSGKVMKTARLVGGTE
                     IQVMSYIENGDKVEIDTRTGEFRKRA"
     gene            complement(36582..37730)
                     /gene="earP"
                     /locus_tag="ACJJDE_000260"
     CDS             complement(36582..37730)
                     /gene="earP"
                     /locus_tag="ACJJDE_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0106361 - protein-arginine
                     rhamnosyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P maturation arginine
                     rhamnosyltransferase EarP"
                     /protein_id="HGG7540253.1"
                     /translation="MNTPPFVCWIFCKVIDNFGDIGVSWRLARVLHRELGWQVHLWTD
                     DVSALRALCPDLPDVPCVHQDIHVRTWHSDAADIDTALVPDIVIETFACDLPENVLHI
                     IRRHKPLWLNWEYLSAEESNERLHLMPSLQESVQKYFWFMGFSEKSGGLIRERDYRNA
                     VRFDTEALRERLMLPEKNAPEWLLFGYRSDVWAKWLEMWRQAGSPMTLLLAGTQIIDS
                     LKQSGVIPQDALQNDGDVFQTASVRLVKIPFVPQQDFDKLLHLADCAVIRGEDSFVRA
                     QLAGKPFFWHIYPQDENVHLDKLHAFWDKAHGFYSPETASVHRRLSDDLNGGEALSAT
                     QRLECWQTLQQHQNGWRQGAEDWSRYLFGQPSASEKLAAFVSKHQKIR"
     gene            complement(37749..38027)
                     /locus_tag="ACJJDE_000261"
     CDS             complement(37749..38027)
                     /locus_tag="ACJJDE_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540254.1"
                     /translation="MSRNLLVRWLAVCLIPLATLAVFAANPPEDKLQHLINGIILACE
                     ATFLFKFVLFDTIKHHLKQEFDLKRQTMLLFIPIILLIVYLFHYFGAF"
BASE COUNT         9554 a         9955 c         9251 g         9498 t
ORIGIN      
        1 ttataccgtc gttgttccta atgcgcaatc agcgacattg ttgccaatta tccgaaagaa
       61 agttaagcct gatggcattg tatacacgga tacctttcgt agttatgatg tgcttgatat
      121 tagtgaattt agccatttac gtaagtttaa cggcattccc aaagagcatt tggggctgca
      181 tttaaagaaa tgccaatggc attttaaata gaatctcaaa ttcagatttt aagacaatta
      241 gttaatggga atttggtctg gttatctagt acagccccaa gtttttatat aaaaacagtt
      301 tggtaagttc tcttcgtgaa gtgcttatgt tttgccacaa aagttccata atcatggcgg
      361 catcacccaa gctccatctt tccaagaaaa tggcatcttt gttgtggttg aaaaccgaca
      421 aactcctctt ttttcgattt ggccctgcct gaatcgatgg cttcccgtgc ggcagatatg
      481 ccgtctgaaa gcgaagcagc gacatttccg gcatacaggg cggcggcggt gttgagcaat
      541 acgatatcgc gcgcagcccc ttctcttcct tccagcacct cattcatttt caacaaagat
      601 tcctgagtat tggcaacttt gatttcatcc aaattgcggc gggtttcgat accgaaatct
      661 tctgggcgga tgtcgtattc gctgattttt ccgtctttga gctcggcaac gcgtgttttg
      721 cccgtcagtg taatttcatc caaaccgccc tccccgcaaa caaccaaaac atgcttggag
      781 ccgagctgtt gcaatactct ggaaaggatg ccgcacaaat cggtgtggaa cacgcccaaa
      841 agctggttcg gcgcgcccgc aggattcgtt aacggaccca atatgttgaa aatacttcgg
      901 aaaccgagcg aacgtcgtac cggggcgaca tggcgcatgg cactgtggtg attgggggcg
      961 aacataaacc ctataccggt ctgcctgata ctttgggcaa cctgttcggg agtcaggttg
     1021 aggtttgccc ccatctgctc caccacgtcc gccgcgccgc tggaggaaga gaccgaccgg
     1081 cctccgtgtt tggcaacctt cgcgcctgcc gctgcggcaa caaacatcga agtcgtcgaa
     1141 atattgaagg ttttcgcgcc atccccgccc gtaccgacga tatcgaccag cccttccgca
     1201 tcctccagcg gcacttttgc cgcaaactcg cgcatcacgg cggcggcagc ggtaatctcg
     1261 gaaacggttt caaccttgat acgcaagccg gtcaaaatcg ccgcaatttg ttcgggcggc
     1321 acttttccgc tcataatctg acgcatcaag tcggtcattt catcgtaaaa caactcgtta
     1381 ttgctgatta atcgttcgat ggcctgttgc ggtgtaatca ttttttgtcc tccgttcaat
     1441 attcggacga aaatgccgtc tgaagggctt cagacggcat cacgtcagat tttttgcggt
     1501 ttgaagtttt gaaattcgat taaaaaattg tttaacatat catgtccgtg ttcggtcaag
     1561 agggcttcag ggtggaattg taccccctca acggcatatt ccttatggcg cacgcccata
     1621 atctcgccgt cttccgtcca tgccgtgatt tccaaacatt cgggcagcgt gccgcgttcg
     1681 ataacgaggc tgtgataacg cgtacaggta accggattgg gcaaaccctt aaacatcccc
     1741 ttgcccgaat gggacacggg cgacacctta ccgtgcatca gcgttttggc gcggactatc
     1801 ctgccgccga acgcctcgcc tatcgtctga tgcccgaggc acacacccat aatcggcagc
     1861 ctgccggcga aatggcgcat cgccgccacg gaaatccccg cttctttggg cgaacacgga
     1921 ccgggtccga taacgagata ttgcggattc aatgcctcga tttcctccaa cgtaatatca
     1981 tcgttgcggc gcacggcaac ttcctgcccc aattctgcga aatactggac gatgttgtaa
     2041 gtaaaactgt cgtaattgtc gataaacaaa agcattttgt gattaaccta ttgatttata
     2101 atttatttat tattaactgc attttcgata cccccattca taccccttat atcttagcgt
     2161 gcccgatgcg ccctcgtgaa tctggcgcag agcctcgcgt tctgacgagt acgccatttt
     2221 gccacctttt cgagcgttcg ggaacgtgcc gtttttatgc actcataaat tttggttatc
     2281 ccgcagccga acataatgga caaacacaac ggaatccgca tcaacatcaa ccgcgccccc
     2341 gaatgacgga ggatacaaat ggacaccgcc tgatgccgca accgtgtcat ttgaaaaact
     2401 tttgcctatg ccctctgagt gttctcaaaa tcttatgata taaaaaatgc aatgttatat
     2461 aataacaaac ttttaaaatg cgaagagaag ccaaaatggc acaaattaca ctcaaaccca
     2521 ttgttttatc aattctttta atcagcacac ccctcctcgt cctagcgcat gaaaccgagc
     2581 agtcggtgga cttggaaacg gtcagcgtcg tcggcaaaag ccgtccgcgt gccacttcgg
     2641 ggctgctgca cgcttcgacc tcctccgaca aaatcatctc cggcgatacc ttgcgccaaa
     2701 aagccgtcaa cttgggcgat gctttggacg gcgtaccggg cattcatgcc tcgcaatacg
     2761 gcggcggcgc gtctgctcct gtcattcgcg gtcaaacggg caggcggatt aaagtgttga
     2821 accatcacgg cgaaacaggc gatatggcgg atttttcgcc cgatcacgcc attatggtag
     2881 ataccgcctt gtcgcaacag gtcgaaatcc tgcgcgggcc ggttacgctc ttgtacagct
     2941 cgggcaatgt ggccggtttg gtcgatgtta ccgatggaaa aatccccgaa aaaatgcctg
     3001 aaaacggcgt atcgggcgaa gccggattac gtttgagcag cggcaatttg gaaaaactga
     3061 catccgcagg catcaatatc ggtttgggca acaacttcgt gctacatacc gaaggcttgt
     3121 accgcaaatc aggcgactac gccgtaccgc gttaccgcaa tctgaaacgg ctgcccgaca
     3181 gccacgccga ttcgcaaaca ggcagcatcg ggctgtcttg ggttggcgaa aaaggcttta
     3241 tcggcgtggt gtacagcgac cgcagagacc aatacggcct gcctgcccac agccacgaat
     3301 acgatgattg ccacgccgac atcatttggc aaaagagttt gattaacaaa cgctatttgc
     3361 agctttatcc gcacttgttg accgaagaag acatcgatta cgacaatccg ggtttgagct
     3421 gcggttctca cgacggtgac ggtgcacacg cacacaccca cagcggcaga ccgtggatag
     3481 acctgcgcaa caaacgctac gaactccgtg ccgaatggaa gcagccgctc cccggttttg
     3541 aagccctgcg cgtacacctg aaccgcaacg actaccacca cgacgaaaaa gcaggcgatg
     3601 cagtagaaaa cttcttcaac aacaaaacac acaacgcccg tatcgagttg cgccaccaac
     3661 ccataggccg tctgaaaggc agctggggcg tgcaatattt gggacaaaaa tccagcgcac
     3721 tttccgccat tcccgaaacc gtccaacaac cgatgttgat tgacaacaat gtgcgccatt
     3781 acagcttttt cggtgtagaa caggcaaact gggacaactt cacgcttgaa ggcggcgtac
     3841 gcgtggaaaa acaaaaagcc tccatccgat acgacaaagc attgattgat cgggaaaact
     3901 actacaacca gcccctaccc gatctcggcg cgcaccgcca aaccgcccgc tcattcgcac
     3961 tttcgggcaa ctggtatttc acgccgcacc acaaactcag cctgaccgcc tcccatcagg
     4021 aacgcctacc gtcaacgcaa gagctgtacg cacacggcaa acacgtcgcc accaacactt
     4081 ttgaagtcgg caacaaacac ctcaacaaag agcgttccaa caacatcgaa ctcgcgctgg
     4141 gctacgaagg cgaccgctgg caatacaatc tggcactcta ccgcaaccat ttcggcaact
     4201 acatttacgc ccaaacctta aacgacggac gcggccccaa atccatcgaa gacgacagcg
     4261 aaatgaagct cgtacgctac aaccaatccg gtgcggactt ctacggcgca gaaggcgaaa
     4321 tctacttcaa accgacaccg cgctaccgca tcggcgtttc cggcgactat gtacgaggcc
     4381 gtctgaaaaa cctgccttcc ctacccggca gggaagatgc ctacggcaac cgtcctttca
     4441 tcgcacagga cgaccaaaat gccccccgtg ttccggctgc gcgcctcggc ttccacctga
     4501 aagcctcgct gaccgaccgt atcgatgcca atttggacta ctaccgcgtg ttcgcccaaa
     4561 acaaactcgc ccgctacgaa acgcgcacgc ccggacacca tatgctcaac ctcggcgcaa
     4621 actaccgccg caatacgcgc tatggcgagt ggaattggta catcaaaacc gacaacctgc
     4681 tcaaccaatc cgtttacgcc cacagcagct tcctctctga tacgccgcaa atgggtcgca
     4741 gctttaccgg cggcgtgaac gtgaagtttt aaaactagat aggcaaacaa aaaaggtttt
     4801 cagacggcat tctgaaaacc ttttttcttt ttaatcaatt tgttaggaaa tatgacaaag
     4861 acaaagaaca aaccactatg ccatcattcc catttttttg tttcatcatt cttgctttca
     4921 cgccgtcatt ctcgcaaaag cagaaaccca tcattcccgc gcaggcggga atccaattca
     4981 ttcggtttca gccgtttccg ataaatcgcc ttagcatttg ggttctagat tcccactttc
     5041 gtgggaatga cggcgtaaag gtttctgttt tttaagtgtt aggtaactaa taagtcgtca
     5101 ttcccgcgca ggcgggaatc caattcgttc ggtttcagcc gtttccgata aatcgcctta
     5161 gcatttgggt tctagattcc cactttcgtg ggaatgaggc ggaaaggttt ctgtttttta
     5221 agttttaggt aactaataag tcgtcattcc cgcgcaggcg ggaatacaat tcgttcggtt
     5281 tctgttattt ctgataaatc accgtaacgt taagttccca gatttccact ttcgtgaaca
     5341 taacggtgtg aacattagca aaaattcaaa aaaccaaact tcctcattcg tgtgaatgat
     5401 ggtactgata ttttctattt cagttcgcaa aattaatctt tcaacacatc ttgcacagcc
     5461 gcctgaatct tagccgccgc tgcctcgatt tgccgttgtt cggcagatgg ggttgccgct
     5521 gtttcaaccg gagcagtttg taaagcaggc tcagattcag gctcggattc gatttgcggc
     5581 gcagccagcg gcaaacgcgc caatacagtg ctgacgccgg ttactttatc gccaatcgcc
     5641 acttgcgcct gcgcatcgac aggcagatac atatccacgc gcgaaccgaa gcgaataaag
     5701 ccatagcgtt cgccgcggga cagtttcgca cctgcttggg tgtagcacaa aatacggcgc
     5761 gccaccaaac cggccacttg aacaaaagta atttcacgac cagaagccgt cgtcgccaaa
     5821 accgcgttgc gttcgttttc cgtgctggct ttgtccaaat ccgcatttac gaatttgcct
     5881 ttgttataga ccacttccgt taccgtacaa tcggcaggcg atttttgcga atgcacgttg
     5941 aacacgttca taaaaatact gattttcaaa gcatcgacat cacgatacgg atcgcgtgcg
     6001 cgctcgacca ccacaatgcg gccgtcaaca gggctcaaca ccgcttcagg attttgcgga
     6061 atctcacgcg cagggtcgcg gaaaaactgc aatgcaaata cggtaaacac ccaaaacggc
     6121 aaagaccacc agccgcagca catcgacacc agcaggctca aagccaaacc gccgccgata
     6181 atcggccagc cctcacgggc gataatcggg tgggggtaaa gacggttcat ttgtcatcct
     6241 tctattcaag cgggttaaaa ttgccgccat tataacggaa tccgccgcat tccgccgaca
     6301 aatgccgtct gaacgcggct tcagacagca tccgagaaag tgctacaata tcggttttcc
     6361 tttatttttc aggcggcatc cattatgtgc aaccatcatc cccgacattc gcacgacaac
     6421 gacaccatcc gcatacgcgg cgcacgcacg cataatttga aaaacatcga tttggacatt
     6481 ccgcgccaca agctcgtggt cataacagga ttgtcaggca gcggcaaatc atcgctggca
     6541 tttgacacgc tgtatgccga agggcagcgg cgttatgtcg agagcctttc cgcctatgcc
     6601 cgtcaatttt tacagatgat ggacaaaccc gatgtcgatt tgatcgaagg cctctcgccc
     6661 gcgatttcca tcgagcaaaa atccaccagc cacaatccgc gttccaccgt cggcacggta
     6721 actgaaatcc acgattacct gcgccttttg tacgcccgcg tcggcacgcc gtattgcccc
     6781 gaacacaatc tgccgctatc cagccagacc gtgtcgcaga tggttgatgc cgtgttgaag
     6841 ctgccggaag acacgcgcgt gatgattctg gcgccggcgg tacgcgagcg taaaggtgag
     6901 tttgtcgatt tctttgccga cttgcaggcg cagggctttg cacgggtgcg agtggacggc
     6961 gaggtctatc agcttgacga agtgccgaag ctggaaaaaa acatcaagca caatatcgat
     7021 gtcgtcatcg accgcgtgaa agtaaaagct gacatcaagc aacggctggc agaaagtttt
     7081 gaaaccgctc tgcgccacgg caacgaacgc gcactggcga tagagatgga cagcggcgaa
     7141 gagcattggt tttccgcgcg tttcgcctgc cccgtatgtt cgtacagcct gcccgaattg
     7201 gagccgcgcc tcttttcgtt caacaacccg atgggctcct gcccgacttg cgacggcttg
     7261 ggtaacacca atttcttcga ctccgaaaaa gtggtcgcgc atcccgaatt gtcgctggct
     7321 tcgggcgcga ttgacggctg ggacaagcgc aaccagttct atttccaaat gattcagtcg
     7381 ctggcgcggc attacggttt cgacgtgcag gctgcttggg aaaccctacc tgcaaaaatc
     7441 aaaaaagtcg tgttgcacgg ctcgggcaaa gaagtcattg atttcactta cctgtccgaa
     7501 cgcggcacca ccttcaaccg cagccacgcc ttcgaaggca tcatccccaa tctcgaacgc
     7561 cgctaccgcg aaaccgacag cgaaaccgtg cgcgaaaaac tgcgcgaata ccaaaaccac
     7621 cgcgcttgcc cgagctgcgg cggcgcacgt ttgcgcaaag aagcccgcta cgtttacgtc
     7681 ggcggcgagc cgttgcacga agtttccgcc tggccgctga ccaaaaccca ccgattcttt
     7741 gaaacgctgg atttggacgg caacaaaaaa caaatcgccg aaaaaatcct caaagaaatc
     7801 accgaacgtc tcggcttttt gattaatgtc gggctggatt acctgaatct ctcccgttcc
     7861 gccgaaaccc tttccggcgg cgaagcccag cgcatccgcc tcgccagcca aatcggcagc
     7921 ggcctgaccg gcgtgatgta cgttttggac gaaccctcca tcggcctgca ccagcgcgac
     7981 aacgaccgcc tgcttgccac cctcaaacgc ctgcgcgatt tgggcaacag cgtcatcgtg
     8041 gtcgaacacg acgaagacgc catccgcgaa gccgatttcg tcgtcgatat gggcccgggc
     8101 gcaggcgaac acggcggcaa cgtattgatt gccgacacgc ccgaaaacgt cgccaaatgc
     8161 gaaaactccg ttaccggaca atacctcagc ggcaaaaaat ccattgccgt gccgtctgaa
     8221 cgcacgccag tcaatcccga ccgaatgctc gtcctcaaag gcgcgcgcgg caacaacctc
     8281 aaaaacgtta cccttgagct gccgctcggt ttgattacct gcatcaccgg cgtatccggc
     8341 agcggcaaat ccaccctgat taacgacacc ctcgccaaaa tcaccgcccg cgaactcaac
     8401 cgcgcccaag aagaacccgc cccatacgac gacatccgcg gcctcgaaca cctcgacaaa
     8461 gtcatcaacg tcgaccaatc ccccatcggc cgcaccccgc gctccaaccc cgccacctac
     8521 accggcctgt tcacccccat ccgcgaactc ttcgccggtg tacccctctc gcgcgaacgc
     8581 ggctacaacg tcggcagatt ctccttcaac gtcaaaggcg gccgctgcga agcctgccaa
     8641 ggcgacggcg tcatcaaagt cgaaatgcac ttcctgcccg acgtgtacgt cccctgcgaa
     8701 gtctgccacg gcaaacgcta caaccgcgaa acgctcgaaa tccaatacaa aggcaaaaac
     8761 atcagccaag tcctcgacat gaccgtcgaa gaagcccgtg aatttttcga cgccgtcccc
     8821 accgtatcgc gcaaactgca aaccttgatg gacgtaggct taggctacat ccgtctcggc
     8881 caatccgcca ccaccctctc cggcggcgaa gcccagcgcg tcaaactcgc cttggaactc
     8941 tccaaacgcg acaccggcag aacgctctac atcctcgacg aacccaccac cggcctacac
     9001 ttcgccgaca tcgccctgct gctggaagtc atagaccgtc tgaaaggcaa aggcaactcg
     9061 atagtgatta tcgagcataa tctggatgtg attaaaaccg ccgattggat tgtggactta
     9121 gggccagaag gcggcgacgg cggagggagg attattgctt caggtagccc ggaggaagtg
     9181 gcgaaggtta aggggagtta tactgggaag tatttgaaga atatacttta aaaaacggga
     9241 tggtttaaac catcccgttt ttttattcct tctgttttcg attttgtttg gctttgaagc
     9301 tatcaaaaat aatgctaaat cccaaacagg tgaacattaa aggcatcccc catttcatat
     9361 ccgaagaaat aacattaaac atttctaata atgtaagaat gcctgataaa gctataaaaa
     9421 tacctaaaaa cattagaact atccttatta tctggagcta tctggagttc ttttaatttg
     9481 aatccatgag cttcctggat tttgagtggg tggtgctttt tgattatctt taatggttgc
     9541 gtagttatct tttcgaccac ctcgtgaacc aatttcttga taaattccac cgttatttcc
     9601 tgtattttga ccaggtttga ttttgttcgt cattatcatc tccataattt aaatagttaa
     9661 agtatgagtc cattgcggat accaatttgc agataaaaaa tctactagat ttttgtctcc
     9721 atagaattgt gtacgcccat gttgttcaaa tattaacgca gattggtcaa tttttaatcc
     9781 atttctacga gcttcagtgg tcaattcctt cagtacgaca ctatggttac cattagttga
     9841 tttagcatca aaaacagcaa agttaatata tcctccacct acggctggat gtcttaagtg
     9901 agcaaatttt attttcataa ataaatccta taaaaaatta cataacagaa attttaagtc
     9961 agagagctac tatgaagtag ctttttgcat tatatgcact ctttttgatt acgtcaagca
    10021 atttttttga attcatattg ccatgaaaaa gattgatgga atataatgca attatgaaaa
    10081 caatcgctcc ttcccatata aagcccctta tgccagagtt gaaccaatct caacgcaata
    10141 ggattatatt tattgatttc tatctatgct ttctaggaaa gataaataga aaagatttga
    10201 tgcaggcatt tcaaatttcc ccagctgttg ctactaggga ttttgcgcta tattgctcta
    10261 gtttttcgaa aaatctccgt tttgatacca aaagtaaatt ttacctctct actgaagact
    10321 ttgaacctca attcccccat tcatttgaaa atgcaattaa aattcttaat ggcagtttaa
    10381 tatttgatat tgattcccaa catcaacctc ttcttccgtt tgatttacct cctgttttaa
    10441 taaatcctga tgtcttaatc ttttctaaaa tatcgaaagc attatcctta aaaaaacctc
    10501 taaaaatctc atatcattca atttcatctg gattatctga gaaagttatt gtgcctcttg
    10561 ctctagttaa tgacggattt cgatggcatt tacgggcatt cgatagaaca aaaaaccgat
    10621 ttgcagattt tgtcctaaca cgaataattc aagcaaatat tttattagct gaaaatattg
    10681 aagaaaatga aacgattaac aatgatattg attggaatag aattgttaaa atcgagttgg
    10741 ttccccatcc taatcatgat gaagctaaaa aagtgattga aatggacttt ggaatgacaa
    10801 atggaaaatt agaattggcg cttagagctt caaatatcgg atatgtttta cagcaatggc
    10861 gagtcgattg ttcgtcagat catcatatcg atgatcctgc ttttagatta tggctgttag
    10921 ataatttagt tttatacggc atcaacaatg ctgaacactt agcgcctgcc tttgataaaa
    10981 aacgtagcaa gccgtagcct acatatccaa ccgaccgcgt gcgtggctgc gccacacacg
    11041 cggttgtttg attgatggct ttctgttgta aattgaactt agttaaaact aacactttca
    11101 gacggcatga aaaatggccg tctgaaaact gaaaaagctt tatctaaaac aactacccta
    11161 actcacaaaa caaaaaacgg attcccaatc attggaatcc gtttttctgt aaagctatcc
    11221 gaattattta gcttcttctt tagcgtcttc agcagcttct ttggcatctt ccgctgcgtc
    11281 ttttgcttct tctttagcct cttcagcggc gtcttttgct tcttctttag cctcttcagc
    11341 ggcgtctttg gctttttctt caggagtttc tgcagcagca agccgtagcc tgcataccca
    11401 acaccgcgtg cgtggctgcg ccacacaccc tacctgtgaa ttacacggaa cttcaaaatc
    11461 aacgtgtagg gtgtgtgcgg tacgcacgca cgcggttgct tgattgacgg tttgccgttt
    11521 caacttttaa cttcgttgaa gctagcgctt tcagacggcc tccaatgtcg tctgaaagcg
    11581 ctagcttcaa cgaagttaaa aaccttaaac aacaagccat tccttctcca acgctcaaac
    11641 caaaaacaaa aatcctatgg cgcgttatcg cagaaacttc attgccggcg gcacattctt
    11701 tttcaccgtc aaactcgccg acccgaaatc gcgcctgctt gtcgaacata tcgacttcgc
    11761 gggcggctta tatggatgtg caaaaacaat attcctttga aaccgtcgcc gtatgcgtgc
    11821 tgccgaacca tattcacgcc atttggacgc tgccgcccga cgatgcggat tattccctac
    11881 tccggcggct gattaaaacc aaattctccg catattcccc ttatactaaa aacttatccg
    11941 ccggcaaaca gcggcagcac gaacgcggta tttggcaacg gcgtttttac ggacacaccg
    12001 tgcgcgacga aacggatttg cagcgttgcg cggactacat ccattccaat cctatcaaac
    12061 aaaaaatgtc gcgtgctaaa acagaatcct gcaaaaaata atatcagtct tttcaaatgc
    12121 gatagttatc attccccaac ttcaaacaag gcgtgtgcaa cctgacttac gggtttgctc
    12181 ctgtttgacc gataaatatt ctgcctgcct caaagggcaa aaataatgtg ggtatgttga
    12241 ggctgcctct ttttgaaatg acaaacaaaa tgccgtctga aacccgattt ccggtttcag
    12301 acggcatttg atgttcaatc agttgtcaaa cctgattatg ccaaaccttt tgttttcaac
    12361 acttccagca tggtagtgcc caactcggca gggctgcggg tgtaagcgat accggctttt
    12421 tcaaacgcgg cgaatttttc ctcggcagta cctttgccgc cggaaataat cgcaccggcg
    12481 tggcccatgc gtttgccttt aggagcggta acaccggcga tgtagccgac aacaggtttg
    12541 cttacgttgg attggatgta ttcggctgct tcttcttccg cagtaccgcc gatttcaccg
    12601 atcatgatga tggcgtcggt atctgggtct tcttggaaaa gtttcagtgc gtcgatttgg
    12661 ttcataccgg gaatcgggtc gccgccgata ccgatacagg ttgattgacc caagcccagt
    12721 ttggtggttt gtgccacggc ttcgtaagtc aatgtaccgg aacgggaaat aataccgatg
    12781 cggcccggag tgtggatgtg gcccggcata ataccgattt tgcactcgcc tggggtaatc
    12841 acgcccgggc agttagggcc gaccaagcgg gtaccgttgc cgttggtttc caagtaacgt
    12901 ttggctttga gcatgtccag agtcggcacg ccttcggtaa tcacaaccac caagcctacg
    12961 ccggaatcaa cggcttcaac gatagaatcc aacacaaacg gagcgggaac gtaaattaca
    13021 gatgcatccg cgccggtttc tttaacggct tctttcatgg tgttgaatac aggcaggttc
    13081 aggtgggttt gaccgccttt gcccggggta acgccgccga caactttagt gccgtaagcc
    13141 agagcttgtt cggagtggaa agtaccgttt ttaccggtga aaccttgaac caatactttg
    13201 gtgtctttat taatcaatac gctcattctt ttctccttag gcgtttacgg ctgcaacaat
    13261 tttttcggct gcgtcattca ggccgtctgc agaagtcagt ttcagacctg attcgttcag
    13321 gattttcgcg ccgagttcgg cgttgttgcc ttccaaacga acaacgacag gaacgtcgac
    13381 gttgatttct ttaacggctg ccacgatggc ttccgcaatc atgtcgcaac gtacgatacc
    13441 gccgaagatg ttgatcaata cgcctttaac ggatttgtct tccaaaatca gtttgaacgc
    13501 ttcaaccacg cggtctttgg ttgcgccgcc gccaacgtcc aagaagttgg caggttgacc
    13561 gcctttgagt ttgatgatgt ccatggtggc catcgccaaa ccggcaccgt taaccataca
    13621 gccgatgttg ccttccaggg caacatagtt caggtcgaat tcagaagctt tcagttcacg
    13681 ttcgttttct tgagatttgt cgcgcaattc agcgattttt ggcaggcggt agagcgcgtt
    13741 gctgtcgatg ccgattttgc cgtccacgca ggcgagcgcg ccgttttcgc gaactgccag
    13801 cgggttgact tcaaacaggg cgaagtcgtt ttcgacaaac gctttgtacg cgccggtcat
    13861 cagtttgacg aactcgttga tttgtttgtc tttcaagccc agttggaagg caacttcgcg
    13921 agcttggcaa ggttgcaggc cgaccagcgg atcaacggtt actttgaaga ttttttctgg
    13981 agtttcggca gcaacttttt cgatttctac gccaccttcg gtagaagcca tgaatgtaac
    14041 gcggcgggta gaacggtcaa ccactgcgcc caagtacagc tcggtttgaa ccggatacat
    14101 atcttcacaa accaaaacgc tgttgacagg ttggccgttg gcatcggttt ggtaagttac
    14161 caagttggtg ccaatcaggc tttcagccac ttctttagct tcttcgcggc ttttaacgac
    14221 ttttacgccg cccgctttac cgcggccgcc ggcatgtact tgtgctttga caacagcgaa
    14281 tttgccgccc aatttgtcgt aagctgcagc ggcttcttcg ccgttgtgtg ccaaaatacc
    14341 gccttgtacg ggcaaaccgt agctagccag cagttcttta gcctgatact cgtgtaaatt
    14401 catggatttc tcctttagat tagtggaatg ccccgagttt gcctccaaat ggcaagcccg
    14461 tgcgtttcag actacctttc ggcggtcgga aaatcgtcgt ttcacttgct gaaaggcaac
    14521 cacatccgcg ccagcagata catggctgca ccgcctcccc cgagaataaa aaagacgatg
    14581 ccttttttac gcgaattcgg acagagcaga taaacggcaa ggctgaaact gataaacaac
    14641 aatgccacgc gccaaaccaa ttctttatct ttgaaacggt tgagcgtata agtttcggtc
    14701 atcatcacat acatctgcca caatgcggcc atacacatgc tgatgatgcc catcggtata
    14761 aagaaaatac cgactatttc tttgttcata acgaatgtaa atgctgtttg tttgtctgac
    14821 ggaattataa atcagaaaac gaagctctcg gaacattcaa tttgtcgaaa gccttaaggc
    14881 cgtctgaaaa gtttcagacg gccttaatat ctatcaaccg tgcaaagcgc gtttgtcggc
    14941 cgccaatgca gcttcgtgaa ccacttcgga caaggtcggg tgggcatgga taatgcgggc
    15001 gatgtcttcg ctgctggcga agaattcgag cgcagtcacg ccttcggtaa ccaattcgct
    15061 gacaaccgga ccaatcatgt gtacgcccaa gatgcggtcg gttttggcat ctgccaatac
    15121 tttaaccgta cctttggctt tgcccattgc caatgcgcga ccgtttgcac cgaaacctga
    15181 agtacctttt ttgtactcca cgccttcggc tttgagctgc tcttcggttt tacctaccca
    15241 agcgatttca ggatcggtgt aaatcacgaa cggtacgttg ttgaagtcga tatgcggttt
    15301 ttgaccggcg atgcgctcgg caacggcaac gccttcatcg ctggctttgt gtgccaacat
    15361 cgggccgcga accacgtcgc cgattgccca tacgttaggc aggttggtac ggcattcgcc
    15421 atctactttg atgaaaccgc gctcgtcttt ttccaagcct acggcttcgg cgttcagacc
    15481 tttggtgttt ggaatacggc caatggcaac gatcagtttg tcaaatactt cggttttagc
    15541 ttcgccggca gcagtttcgt aagcaacgga aacgcctttg ccttcagatt tgatgtcgcc
    15601 aattttcacg cccagttcga tgttcaagcc ctgctcttta gtgaagtatt tgaaggcttc
    15661 tttggcgatt tgttggtcgg cggcagccag gaaggtcggc gcagcttcaa gaatggtaac
    15721 ttctgcaccc acgcggttcc atacggaacc catttccaaa ccaatcacgc cggaaccgat
    15781 gacgcccagt ttggcaggca cttcggtcag gttcaatgcg ccttcgttgt ccaatacgtt
    15841 cacgttgtcg atagcgactt gtggcagcgg acgcggtacg gaaccggttg ctacgatgac
    15901 gtgtttggct tcgataacgg ttttctcgcc tttgttatcg acttcgattt ggtaagcatc
    15961 gccattttta ccggcaaaag aagcagtacc gaacaggctg gttactttgt ttttttggaa
    16021 caggaatttc acgccgccgg tcagcttggt cacgatggca tctttgcgct caatcatttt
    16081 ggccgcgtcg aattttatgt cgccgacagt gataccgtgt tcggcaaact cgtgttgcgc
    16141 ggcgtggaaa tgttcgctgg attgcaacag ggctttggaa ggaatacagc ctacgttcaa
    16201 gcaagtaccg cccaatgcag gggcattgcc tgctttgtta acccctgcgt caacgcaagc
    16261 ggttttgaaa cccagttgcg cggcacggat ggcggcaacg tatccgcccg ggcctgcacc
    16321 aatcactact acatcatatt gagacatcgt gtcatccttt gcttttgcag tatctcaaaa
    16381 taaaaacgat actttttgtt tcttttttat tttgaatgac tgcattttga cggttttaag
    16441 aaaaggccgt ctgaaagtct atatctgccg attcattcga atcaaatgtt tcagacggcc
    16501 tcaatcgttc gctgagccta ttgtagcacg atactacatt acgctacatc taaatatagt
    16561 ggattaaatt taaatcagga caaggcgacg aagccgcaga cagtacagat agtacggcaa
    16621 ggcgaggcaa cgccgtactg gtttaaattt aatccactat aaaaattcag acggcctttt
    16681 cattaacaaa taaaaggccg tctgaaacga ttacagatcc aacaacaggc gggctgggtc
    16741 ttccaacgcg tctttaatgg ctaccaaagt caatacagct tcgcgaccgt cgatgatacg
    16801 gtggtcgtaa gacagagcca gatacatcat tggacggaca acaacttgac cgttttcaac
    16861 cacagcgcgc tctttagtgg catgcatacc caaaatcgca gattgaggcg ggttgatgat
    16921 cggggtagac atcatagaac cgaaagtacc gccgttggta atactgaatg taccgccggt
    16981 cagatcttcg atagcgattt tgccatcttt ggcttttttc gcgtaatcaa caattgcttg
    17041 ttcgatgtcg gcaatgctca tttggtcggc atcgcgcagg attggcacaa ccaaaccgcg
    17101 tgggctgcca atcgcgatac cgatgtcgaa gtagccgtgg tacacgatgt ctttgccgtc
    17161 aacagaagca ttcacaaccg ggtatttttt cagggcggcg acagcggctt taacgaagaa
    17221 ggacataaag cccaatttca cgccgtgttc tttctcgaat ttttctttgt acttcgcacg
    17281 caagtccatg attggtttca tgttgacttc gttgaatgta gtcagaatgg cgttttcttg
    17341 ttgagaagcc aagaggcgtt ctgcaacacg ggcacgcagg cggctcattg gtacgcgttc
    17401 ttcaggacgt gcgccggcag gggctgcggc tgcggcaggt ttggcagcgg cattttgtac
    17461 gtcttctttc aatacgcgac cgtcacggcc ggaaccttgc aatgcgttca cgtcaacacc
    17521 ggtctccgca gccagtttgg cggcggcagg catagcggcg ttgttttgtg cggcagcagg
    17581 agcggcagcc ggggcggctt cggcaggagc ggctacgggt gcttcggcag cggcagtagc
    17641 agctgtatcg atgcgtgcca aaacttggtc ggcaacaacg gtttcaccgt cttgcgctac
    17701 gatttcaacc aatacgccgg cttgtgggga agggacttcc aaaaccactt tgtccgtttc
    17761 gatatcgatc aggatttcgt cacgggcaac tgcttcgcca acttttttct tccattccaa
    17821 gagcgtgcct tcagatacgc tttcagacag cataggtact tttacatcaa taatcatttt
    17881 gtgtctccaa tggccctttc agacggcctg ttgtgtgttt ttcattctgc atatgggcat
    17941 tccgcctgag cagcctcaga cggaatgcca cttggcttac aacgccaaag cgtcttcaac
    18001 caattgtttc aattgggcaa tatgtttgct tgagtagccc actgcaggcg atgcgctgct
    18061 tggacgaccg gcataagaca gtttttgctc ttcgctgata acgtcttcga tgcggtggcg
    18121 gatttggtag aacgcacctt ggtttttcgg ctcttcttgt gcccaaacca cagattttgc
    18181 gttcggatat ttcgccagtt cggctttaac ctcctcgtat gggaacggat acagctgctc
    18241 aacgcggaca atcgcaacat catcttccag tttacgctcg gtacggcctg cttccaagtc
    18301 atagtaaacc tgaccggcac acaataccac acgtttcacg ctgccgttgc ttgcgcgttc
    18361 ggcggtatca ccgataaccg gacggaaagt cgaaccttcg gtgaagtttt ccagcgggct
    18421 cattgcacct ttgaagcgca acaggcgttt ggacatgaaa atcaccagcg gtttgcggta
    18481 tgaacccaaa acttggcgtt gcaagaggtg gaacatttgc gacgcttcag acggcatgat
    18541 gacttgcata ttgttctcgg aacacagttg caaccaacgt tctacgcgtg cagaggagtg
    18601 ctcggggcct tgaccgtcgt agccgtgcgg caggatggtg gtcagaccgc acaaacgacc
    18661 ccatttggtt tcgcctgaag acaggaattg gtcaatagtc acttgcgcgc cgttggcgaa
    18721 gtcaccgaat tgagcctccc aaatggtcag cttgtcaggc gcggagcagg caaagccgta
    18781 ctcgaacgcc atcacggctt cttcgttcaa aatggagtcg ataaccagga actcgcccat
    18841 accttcgccc atatggcgca gagggacata agtaccgtcg tcccattttt cgcgtttttg
    18901 atcgtgcaat accgcatgac ggtgtgagaa tgtaccgcgc ccagagtcct cgccggaaat
    18961 acgcacgcca tggcctttgg ttacgaggct ggcgtatgcg agggtttccg ccatacccca
    19021 gtcgatggct tgtttgccgg atgccatggc tttacgcgct tcaatcacac gttttgcagt
    19081 cggatgcagg gcaaagcctt ccggtacggc ggtaaacttc tcagtgagac gctcaatatc
    19141 tgcggcaggc aaaccggttt cgatgtgttc gcgccaatct ttgccttggt atttgctcca
    19201 gtcgatttgc gtgcgttgaa agttgctcaa cgttgtttgc tcgacgtgtt cgcctttgtc
    19261 caaagcatca cggtaggctt ggatgtaacc gtctgcctcg gcttgggtta ccacgccttc
    19321 ggcaatcagt tgctcggtgt acaaagcacg cgcaccgggg tgttgcgata cttttttgta
    19381 catcatcggt tgggtcaagg tcggatcatc gccctcgttg tgaccccatt tacggtagca
    19441 gacaacgtca atcacgatgt ctttatggaa ttttttgcgg taatccaaag cggcttggat
    19501 ggcaaagcaa acacgctcag gatcatcgcc gttcacatgg ataaccggag cggaaaccat
    19561 ttttgcgata tcggtacagt gtacggttga acgggtatcg cggatatcgg aagtggtaaa
    19621 gccgatttgg ttgttgatga cgatatgaac cgtaccgccg gtggtataac cgcgcgtttt
    19681 agacaggttg aatgtcgctt ggttgactcc cagaccgata aatgcggagt cgccgtgaat
    19741 caataccggc aagactttgt cgcggccgtt ttcgcccaaa cgtttttgtt tggcgcgcgc
    19801 agaaccttcc accaccgggt tgacgatttc taagtgagac gggttgaacg ccaaagaaac
    19861 atgcatcggg ccgtgcgggg tagcaatatc ggagctgaag cccatatggt atttcacgtc
    19921 gccgctgggc agtttgattt cggcacgacc ttcaaattcg gcaaacaaat cgccgggttt
    19981 tttgcccaaa atgttcacca aaacattcag acggccacgg tgcgccatac cgatgatgac
    20041 ttcttccacg ccgtctttac tggcgttttg aatcaggtag ttcaaaccgg caatcgcgct
    20101 ttcgccgcct tcgacaccga aacgtttctg accgacatat ttggtatgca gataacgttc
    20161 caaagtttcg gcagcagtca tctctttcaa gatacggcgt ttttgatcgg cattgtaatg
    20221 cggtgtggac aatacgcttt caaaataatt gcgtacccag cggcgctctt cggtattggg
    20281 aatatagata tattccaatg cgatgtggcc gcagtaggtt tgtttgaggt tgctgatgat
    20341 ttgggacaaa ggcagtttgc cgcgattggc aaaatcgccc tcgcccatat tgaattgaag
    20401 cgtcatatcg gcatctgaca gaccgtggaa tttcggatcg agggcttcaa tatcgcgcgg
    20461 ggggatacgt ttgagcggat caagttgggc tgcacccacg ccttggatac gataggcaga
    20521 aatcagccgt aaaacgctga cttgcttttt cagcattgcc tcatccgcac cgcccgcaac
    20581 ggcagatgca attttctttt tcgccaaagt aacaaatgat tcgcgaatcg gtgtgtgtgc
    20641 gacatcgaca gcaaccgtcc ccggctgttt gctcaaatcg gtgaaatact gcttccattt
    20701 ttcatcaacc gcatcggggt tttccaaaaa agcctcgtac aattcctcaa tgtagggtgc
    20761 gttcgaaccg aacaggtaag agaaattgag tttttcgtcc atcatggcgt gcgctctttt
    20821 ctttaaaata taaacaaagg gtagaagtcc gcgtcctgac ggctgaactg atgccgtctg
    20881 aaaagacatt ttattctacc ctattttaaa ccggattgcc tgtattgatt tcatccgact
    20941 acaatcaaat gtatacagaa agcaatccga ttctctaata ttgcctgttt gacaatatat
    21001 taatgtatgt tacctctctc ctgccggcac ataatcgcgg cgttccgaac cagtataaag
    21061 ctggcgcggg cggccgattt tcagcgaagg atcgctgatc atctcgtgcc agtgcgaaat
    21121 ccaacctacg ctgcgcgaca gggcgaagat gacggtaaac atttcggtcg ggatgcccag
    21181 cgcggacagg acgatgccgg aatagaaatc gacgtttgga tacagcttgc gttcgataaa
    21241 gaacgggtct ttcagcgcaa tctgttccaa ttccatcgcc agtttgaatt tcggactgtc
    21301 ttccaagccc aattccttca aaacttcata gcaggtttcg cgcataatgc tggcacgcgg
    21361 atccatattg cggtacacgc ggtgaccgaa gcccatcaga cggtatttgc gttgtttcac
    21421 accttccatg tatgcggcaa cattagacac atcgccgatt tcgtccaaca ttttcaacac
    21481 ggcttcgttc gcaccgccgt gcgaagcacc ccacaggcag gcgataccgg cagcaataca
    21541 ggcaaacgga ttcgcacccg aagagcctgc cagacggacg gttgaagttg aggcgttttg
    21601 ctcgtggtcg gcatgcaaaa taaagatgcg gtcgagcgcg cgtgccaaaa cgggattggg
    21661 tttgtagtct tcacacggcg tggcgaacat catatgaagg aagttttcgg aataagaaag
    21721 attattcttc ggataattga acggcagacc gtttgaatag cggtagcaca ttgccgcaat
    21781 ggtcgggatt ttggaaatca ggcggtaaat cgcgattttg cggtgttcgg gattgctaat
    21841 gtccaagctg tcttggtaga acgcagacag cgcgccgacc acgccgacca tcatcgccat
    21901 cggatgcgcg tcgcggcgga acccccggaa gaaccaagtc agctgttcat gcaccatcgt
    21961 gtggcggcgg acggtattgt caaattctgc cttttgctcg ggagtcggca gttcgccgta
    22021 aatcaacagg tagcagactt ccaaataatc ggatttttcg gccagctgct cgatggggta
    22081 tccgcgataa taaagcaagc cttgatcgcc gtcgatgtaa gtaattttag actcacagct
    22141 tgcggttgaa acaaatccgg ggtcgaagga aaacaaacct gtattttttg tcagcccccg
    22201 aatgtcaacc acatcgtgcc cgatgctggc ttccaatacc ggcagctcca aacctgcctg
    22261 acccggtacg ttgagtttga ttgatttgga catattattg ctcctttgca agttataacc
    22321 cacgttactg catccgcagc acgttctttg ccttcagacg gcttttgcat tttgaaatct
    22381 gcctgcaggc agatttcaga tgcctcatgc ccgtctgatt ttttcaagca tcgggataag
    22441 gtgccctttg tccgtttccg aatgcccgtt aatcaaggca agcaattctt gatcttgaaa
    22501 ttcaaggatt tcggaaaact cggacagctc tttatcgctc aaatgctcga attctttttc
    22561 cataaacctg ccgaagatta aatctaactc caacaatccc cggcgggttt gaaaacggat
    22621 tttccgtttg gcaatatcgt caaaaaccat catttcttaa acggcccgct tcaacataat
    22681 ctctttaatc ttaccgatgg ctcgggtcgg attcaagtgt ttggggcata cgtccacaca
    22741 gttcataatg gtgtggcagc ggaacaaacg gtatgggtcg ttcagatcat ccaaacgctc
    22801 attagtgatg gtatcacggc tgtccgcaat gaaacggtaa gcattcagca aaccggacgg
    22861 accgacgaat ttatcagggt tccaccaaaa tgacgggcag gcagtcgaac agcaggcgca
    22921 caaaatacac tcgtacaaac cgtccaactc tttacgctct tcctgagttt gcagacgctc
    22981 tttgtccgca tcaatcggat tatcgttgac aacataaggt ttgacggaat ggtattgttt
    23041 gaagaactgg gtcatatcca caatcaggtc gcggataaca ggcagacctg gcagaggacg
    23101 aattttaacc ggctgtttca agccacgcag atcggtcaga cacgccaaac cgtttttgcc
    23161 gttgatgttc ataccgtccg atccgcaaat gccttcgcgg caggaacggc ggaaagacaa
    23221 tgtatcatct tgtgctttca ggcgcactaa agcgtccaaa agtttaacgt cggttggttc
    23281 caattccaac tcgtaacgct gcatataagg tttggcatca acgtccgggt tgtaacggta
    23341 aatttcaaaa ctcatttttt ccatgagaag tgttcctttt ctcataaact gcccaatgat
    23401 tttgtattat gaattcaagc agttcaatgt gggtatggtt agatttcaga cgacctttga
    23461 ggcgaagacc gtctgaaaac gcatcaataa acgcgcttgg ccggtttgat gtattccacg
    23521 ctcaagggct tggtatgcac cggtttgtaa gacaaggtat tggtatctga atggtacagc
    23581 gtatgtttca tccagttttc atcatcgcgc tcaggatggt cgtctgaagc gtgcgcaccg
    23641 cgtgattctt tacgtgcttc ggcagacacc aaagtcgctt tcgccacttc aatcaggtta
    23701 tccaattcca aagcctcgat acgcgcggta ttccacactt tgctcttgtc tttgatttcg
    23761 gtacgtttca cacgctcggc aatcgccatg acttctcgaa cgcctttgct cagaatctca
    23821 tcagtacgga acacgccggc gtgcagttgt acagagcgtt gcagttcgcg acgcaatgca
    23881 tcaacgtttt caccatcggt ttggttgtcc aaacgctcga tacgttggcg ggtcaactca
    23941 cctgcattag caggcaaagg tttccagtcg ctttgctctt tgatgaattt aatcatgctg
    24001 tcgccggcag ctttaccgaa taccaccaag tccaacaggg agttggtacc caagcggttc
    24061 gcaccgtgta cggaagcaca agcgcactca cctgccgcat acagaccttt tacaggcact
    24121 tcgtaatctt caccttgcgg aacgacaact tcgccgtggt aattggtcgg aatgccgccc
    24181 atcatatagt gggtagtcgg cacaacggga atcgggtctt taatcggatc gataccggcg
    24241 aactgaatgg aaatctcgcg gatgcccggc agtttttcca taattttttc tgcgccgata
    24301 tggtcgattt tcagtaagac atggtctttg tttttaccgc agccgcgacc ttcgtagatt
    24361 tccatcgcca tcgcgcggga aacaacgtcg cgagaagcca agtcttttac ggtcggcgca
    24421 tagcgttcca taaagcgttc gccgtcggca ttcaacagaa taccgccctc gccgcgtacg
    24481 ccttcggtaa tcaacacgcc cgcacccgcc acgccggtcg ggtggaattg ccagaattcc
    24541 atgtcttcca acgggatacc tgcacgcgca caaataccca aaccatcgcc ggtattcata
    24601 taggcattgg tagaagacgc ataaatacga ccgccgccgc cggtagcaaa catcacagct
    24661 ttagcgtgga aaatataaac ttcgccggtt tccatttcca tggcggttac gccgacgaca
    24721 tcgccgtttt catcacgaat caaatcttgt gccgtccatt ccacaaagaa ttgcgtattg
    24781 gcacggacgt tttgttggta caaagtatgc agcatcgcat gacctgtacg gtcggcaacc
    24841 gcacaggcgc gttctaccgc gcgtttaccg tgttcggcag tatggccgcc gaaaggacgc
    24901 tgataaattt taccgctttc cacacggtca aaaggcatac ccatgtgttc caactcaatt
    24961 acggcttcag gcgcggcgcg gcacataaac tcaatcgcat cttggtcgcc caaccagtcg
    25021 gaacctttca cggtatcgta catgtgccag tcccaacggt cttcctgcac attacccaga
    25081 gaggcggaaa taccgccctg cgccgctacg gtatgcgaac gggtcgggaa cactttagac
    25141 aaaacggcac aattcagacc ggatttggat aattggaggg ctgcgcgtaa acctgcacca
    25201 ccaccgccga caatcacggc atcaaacttg cgaacaggaa aacccatact tacccccaaa
    25261 tcactttaac tgaatacacg agacagccga ccagccaaac gatggtggca acctgcaaaa
    25321 acaaacgcac gccgaagggt ttgatatagt ccatccacaa atcgcggata cccacccaag
    25381 cgtgcaagaa tacggcgatg aagctcactt gggtaaatac ttttacccaa gtttgactaa
    25441 aaaatgcctg ccatgccgaa tattctttag gcagggaaaa tagaaccact aaaagtgcaa
    25501 cggtataaat caacataata accgcagtcg cacgttgcat cacccaatcg cgcaaaccgt
    25561 aatgggcacc ggtcaattta cgttctacca taacaacgct cccaaaacga cagtcaaaac
    25621 caatgcagaa gcaaatacgg ctttagcggt attgcgcgca gtattcagct caaggccttt
    25681 gtgcgcatcc aaaaataaaa agcggatacc ggcaagggaa tggtgcagat aagcccacaa
    25741 tacgccgatt aaaaccagct tgaccaaagg atgggaaaca atggcacggt aagtttcaaa
    25801 tgcagactct tgactcaggg tgccggacag gaaatacagc aggaaaggca gcataataaa
    25861 cagcccgacc ccgctgatgc ggtgaaggat ggaaactatc ccgggtatcg gcagacggat
    25921 gttcggcaaa tccagataaa caggacgcgg tttgacagac atagtcaatt cctctgtagt
    25981 tatatatcga ctcaaaaacc gtaaacccat tgctacactg ggttacataa acgttaattt
    26041 acctgtttta tcccattttg aacagtgtat tttaaaaaca aactgataga ttttgacaaa
    26101 cacgcgtgaa aacagcagat taaaagaaag atttttagtt ttgccccctt cccgacacgg
    26161 tatcagcatc cgacctccaa ccccatcctc aaaaataaaa tgccgtctga aaaaatttca
    26221 gacggcattg ttttgccata tcggtcaggc tttcaatttc gcatcggcat cacgcaacgc
    26281 agtacgcaga ccttcctcga taacaggatg gtagaacggc atatccagca tttgcggaac
    26341 ggtcatcttc atttgatgcg cccatgccaa caggtgcgcc aaatgttcgg cggcagggcc
    26401 tacgatttcc gcaccaatga agcggccggt tgctttttcg gcatacaggc gcatatggcc
    26461 tttgtttacc agcatcacgc ggctgcggcc ttggttttta aacgatactt cgccgatgac
    26521 aaattcgtcg ggttggtatt gcgcggtaac ctgcgcgtat ttcaaaccga caaagccaat
    26581 ttgcggattg gtaaacacca cgccgatggt gctgcggcgc aaaccgccgc cgatattcgg
    26641 atagcggccc gcgttgtcgc cggcaatctt gccttgatcg gcagcttcgt gcagcagggg
    26701 cagttgattg gatgcgtcgc ccgcaataaa gatatgcgga atactggtct gcatggtcag
    26761 cggatcggca acgggtacgc cgcgcgcatc tttgtcgata ttgatgtttt ccaaaccgat
    26821 attgtcaacg ttcggacggc ggcctacggc tgccagcata tattcggcaa caaatacgcc
    26881 tttttcgccg tcttgctccc aatagacttc tacattgccg tccgcatcga gtttgacctc
    26941 ggttttggca tccagatgca gtttcaattc ttcaccgaac acggctttcg cctcgtctga
    27001 aacgacaggg tcggaaatgc cgccgatgat gccgcccaag ccgaaaatct cgactttcac
    27061 gcccaaacgg tgcaatgcct gccccagttc caaaccgata acgcccggtc cgaacacggc
    27121 aacgctctta ggcagcgtat cccatgagaa aacgtcgtca ttgataatca aacggtcgcc
    27181 caaagactgc cactgcggca ggataacggg acgcgagccg gtagcaatca cgaaactttt
    27241 tgccgtgatt tgggtatggt cgtcgatttg gacggtatgc tcgtcgataa atttagccga
    27301 acccatgatg cgtttgtcag caggccattc ttccacatcg gcaacgacaa agccgacaaa
    27361 acgatcgcgc tcggatttaa cgcgctgcat cacttcttcg ccattgacga cgatactgtc
    27421 tttatccaaa tgcacgccga acgggtcggt atgcaatgcg tgatggcgcg cctcggcggc
    27481 ggcaatcaag agtttggaag gcatacagcc cacgcgcgcg caggtcgtgc cgaacacatt
    27541 gttttcaatc aggtaaacat tgtccgaatg taaacgggca ttgcgaaacg cgcccatacc
    27601 ggcagtaccg ccgccgatta cgacgacatc tgcttgaatt tttttcataa tctttgtcct
    27661 tccgttttcg tctgaaacac tgccgacacg gaatatatcg gcttcagacg gcatttaaat
    27721 attttcccaa tcaaaaacat tattcagata aataaaaaca aaatttcgat tgagtgcaac
    27781 aatatccaaa tcctcttata aatatagagt tattcggagc ggtagtgtag aaccgcccga
    27841 ataactctat ccggtatatc agacagttta atcaaaccgc cttaagcaaa cagctatcag
    27901 tttttagcca agtaagcttc caaatcttcg ctgccgccga tgtatttacc gccgatgaag
    27961 acttgcgggg cagtcatctt gccggtaatg gcgcgaacgg aagtaacggt tgcatctttg
    28021 cccaatacga tttcttcgta agacaaacct ttgtcttgca gggcttgttt ggctttagca
    28081 cagaattggc agccgggttt ggtaaagatg gcaacagact cttgagcctt ccaattggga
    28141 gcaacgaatt tcagcatagt atctgcatcg gatactttga acggatctcc tggttcttcc
    28201 ggctcgatga acattttttc aaccacgccg tcgttaacca gcatggagta acgccaagaa
    28261 cgtttgccga agcccaagtc ttctttaccg accaacatgc ccatgccttc ggtgaattcg
    28321 ccgttgccgt caggaatcat gtagatgttg tcggattctt cttcggccgc ccaagcgttc
    28381 attacgaaag tatcgtttac agatacgcag tagattgcgt caacgccgtt ttctttgaac
    28441 gcgccgaaca attcgttgta acgcggcagg tgtgaagaag aacaagtcgg ggtaaatgca
    28501 ccaggcaggg agaatacgac tacttttttg cctttgaaca aatcatcggt agacacatct
    28561 ttccaagtgt cgccaacgcg ggtgcggaat actacggaag gtactttttg accggtacga
    28621 tcttgcaaag ccattttgag ctccttaata gataggttta agaaatgatt gtgaatcgct
    28681 gggcattcta ccccgaataa gtcgatttgt ataatttata gttcaaataa tattaattat
    28741 tcaaaactat taatcaccaa cctcgaccaa cttttacagt atataaagcc atgcctaaaa
    28801 aaaacaagtc ttatttgaga aaaattctta gaaactcccc tacgctcatt tgaaaacaga
    28861 aatgccgtct gaaaagtatt cagacggcat ccgatcacgt tatccctgct tatttagcca
    28921 gttcggcacg cagtttgtgg gttacgttca tcatcacttg gagttgttcc agagtttctt
    28981 tccaaccgcg tgttttcagg ccgcagtctg ggttaaccca cagacgttca accggtacaa
    29041 cctcgatggc tttgcgcaac aggtgctcca cttcggcttc tgtcggtacg cgcgggctgt
    29101 ggatgtcgta aacccccggg ccgatgtcgt tcgggtattg gaattcgccg aacgcggtca
    29161 agagttccat gtcggaacgt gaagtctcga tggtgatcac gtccgcatcc attgcagcaa
    29221 tcgcaggcag gatatcgttg aactcggagt aacacatatg agtgtggatt tgggtgctgt
    29281 cttcgcaacc ggcagaggac aggcggaagg attcgcccgc ccagttcagg taggcatccc
    29341 aatcggcgcg tttcagcggc aagccttcgc ggatggcagg ttcgtcaatt tggatgactt
    29401 tgatgccggc tttttccaga tccaatactt cgtcgttcag agccagtgcg atttgtttgc
    29461 acacggtaga gcgaggaatg tcgttgcgga cgaaagacca ttgcagaatg gttacagggc
    29521 cggtcaacat acctttcatc gggcgtttgg tcaggctttg tgcgtaagta gaccaagcca
    29581 cggtcatggc ttcaggacgg cttacgtcgc caaagataat cggtggtttc acgcagcgtg
    29641 agccgtagct ttgtacccag ccgtattgag tgaatgcaaa accgctcaac aattcgccga
    29701 agtattcaac catgtcgtta cgctcggctt cgccgtgtac cagtacgtcc aagtccagtt
    29761 tttcttgctc ttcaaccacc aaggcgattt cttttttcat cgcggcttcg taatcggcgg
    29821 cagacagttc gccttttttg aaggctgagc gtgcctggcg gatttcggtg gtttgcggga
    29881 aagaaccgat gttggtagtc ggtagcagag gtaggttcaa ccatgcttgt tgcgctttga
    29941 tacggtcggc aaatggagat ttgcgttggt ctgcgttggc aggcaaatcg gccaggcgtt
    30001 tggcaacgtc tgcacgatgg atttcgctgc tgttggcacg ggagtcggca gcagcttggc
    30061 tggcggcgag ttcttcggca acagaatcac ggccttcgtt caatgcagct ttcagaacgc
    30121 gcaattcttg ggttttttgc agggtgaatg ccaaccaaga gtacaggtcg ggtttgttgg
    30181 ctttcagttt ttcttcaact gacaagtcaa atggagtgtg cagcagcgag caagagctgg
    30241 aaatccacaa acggtcaccc agtttggctt gcagaggctc gacagtttcc aaaactttgt
    30301 tcaggttggc gcgccaaatg ttgcggccgt caatcacgcc ggcagacagg actttgtcgt
    30361 agtcggcgaa cgcgtccagt tgctcggggg cgcgtaccaa gtcgatgtgc agaccgtcaa
    30421 caggcagggc tttcaacaat gcggcgtgtt cggcaacaga accgaagtaa gtgctcaaca
    30481 ggattttggc acttactttg ctcaaagtag cgtaaacgtc tttgtaggct tccacccatt
    30541 ctttaggcaa atcgacagcc aaagcaggct cgtcgatttg aatccactcg gcaccggctt
    30601 caaccaaagc agtcaggatt tcaacgtaaa caggcaacag tttaggcaac aggctcagac
    30661 ggtcgaattc gacggcgcct ttttctttac ccacccacag gaaagtcaac ggacctacaa
    30721 cggtcggttt ggctttcaga ccgagggctt gggcttcttg cagttgttga acatagtgtt
    30781 tggcattggc tttgaattcg gtatcggcgt ggaattcagg caccaagtag tggtagttgg
    30841 tgtcgaacca tttggtcatt tcgatagcga attggtcttt gttaccgcgc gccagttgga
    30901 agaattgttc caaagacagg ttttggctgt cgaagccgaa gcgggcggga atcgcgccgg
    30961 tggcgacttg caggtcgagg atgtggtcgt agaaagtgaa atcgcctacg gcaacgaaat
    31021 cggcgttggc agcgacctgg tgtttccagt ttttctcgcg caagtcttta gcaacagcca
    31081 gcaattcttg ctcgctgatt tctttgcgcc agtatttttc ttgtgcgaat ttcaattcgc
    31141 ggaaggcgcc gacacgcggg aagcctgaga aatgtaatgt tgtcatgttg aactctccag
    31201 ttggattttg taaggaccgg ttcaatccga atcggccggt attgtaaatc agaatggctc
    31261 ggatggggcg gtgttttgct ttttagacac cttagatgcc gtctgaaact gtttgatacg
    31321 gctttaaggg cgcacgccta aaatatggca aatggcgtaa gtcagctcgc tgcggttaag
    31381 cgtatagaag tggaaatctt tcacgccttc gcgggacagg actttgacca tatcgatggc
    31441 gatacttgcc gccaccagat tgcgcgtacc ttggtcgtcg tccaaacctt catacatttg
    31501 cgacagccag cttgggattt tgacgttggt tacttgagcc attttaccga gctgcttgaa
    31561 gttggtaaca ggcaaaatac cggggacgat ttccacatcg atacccaaca tcacgcagcg
    31621 gtcgcggaag cgcaggtagc gttccacatc gaagaagaat tgggtgatga cgtggttcgc
    31681 gcccgcatcg attttgcgtt tcaaattaat caggtcggct tgtgcggatt tcgcttcggg
    31741 atgcacttcg ggatatgctg ctacagagat gtcgaagtcg gcgacggagc gtaatagctt
    31801 aaccaagtct tcggcgtaaa acggtttttt ctcataaccg gccggctcgt ctccgcgcag
    31861 ggcgacaatg cggcggatgc cgctgtccca ataatctttg gcaatttggc gcaattcgtc
    31921 gggagaagcg tcgataccgg tcaggtgagg cgcggcttcc aagccggttt cctgtttgat
    31981 gcgtttgacg atgccgtgtg tgcggtcgcg ctcgcctgag tttgcaccgt aagttacgga
    32041 aacaaatttc gggtgcaagg tttgcaggcg atggatggaa tcccacagca tggtttccat
    32101 ttgttcgttt ttcggcggga aaaattcgaa tgaaacgttg atgtcgcctt tcaaatcgga
    32161 aaggctgtta tttaacgcat tgatttcttt tgcgtaattc atggctgcgt accttttatt
    32221 atcttttata tgatgtttca ggcaacataa taaagttgcg ccaaacatga gtcaatttca
    32281 aaattttcag atttatcatg aaaatttcta atatattaca aaaatagtta aatttccttg
    32341 tacagccctt ctaaactatg ctagagtttg ttatgttata acactgaaag caaggcaata
    32401 tatgaaaccg aatattcatc ccgacaatta ccgaaccgtc ctttttttcg atagcagcgc
    32461 caatgaaggc tggttaatcc gctcctgtgc cgaaacacac ggaaaaacga tggtttggac
    32521 agacggcaaa gaatatccgc tgttttcgct ggatacttct tccgcatccc atcccgtcta
    32581 tactggcaaa cagcgcaacg tcaacaccga aggccgtgcc agcaaattca accaacgttt
    32641 ccaatccgta atgtcatcgt ttagaaagga caaataatgc aggttctgtc ttcactcaaa
    32701 accgccaaac aacgccaccg cgactgccaa atcgtcaggc gcaggggcaa agtttacgtc
    32761 atctgcaaaa gcaatccgcg ttttaaagcg cgccaacgct gaccccctgc ccttcctgct
    32821 tcggttgtaa atcccctcct accgcaagcc cttttcaaaa aatgccgtct gaaacagaaa
    32881 aatgcgtttc agacggcatt ttttccgtca atacgaatcc ggaatgtgtt tgaaatacag
    32941 cataaacaga taccaaaaca gcgtcgcggc ggccgcaccg agcagcaccc gggcactgat
    33001 ttcggcaact tcgcgcaggg cgcgtttctg cctgcggctg aagaggcggt tcataatcag
    33061 cgcggcaagt gcgaaaaaga aaaaaatacg gaaaagtctg cctatcatgt cgggaagcga
    33121 aaagtatggt tcgggcgcgg cggcatgggg aaggatgttt cagcgcgtca ggctgcttgt
    33181 ccgaccgtgt caaaaagtca tgccgtttgc gatataataa cgctttttgc cgtatttgtt
    33241 ggaacaggat atgagtcaaa atgcctcggt gggcattgta atgccccaaa aaattccgtt
    33301 tgaggtgccg ctggttttgg aaaacggtaa aactttgccg cgtttcgatc tgatgattga
    33361 aacctacggc gagctgaatg ctgaaaaaaa caatgcggtt ttaatctgcc acgcgctgtc
    33421 gggcaaccat catgttgcgg gcaggcattc ggcggaagat aaatatacgg gctggtggga
    33481 caatatggtc ggacctggca aaccgattga tacggaacgt tttttcgtgg tcggtttgaa
    33541 taatctgggc ggctgcgacg gcagcagcgg gcctttgtcg atcaatcctg aaacgggtag
    33601 ggaatacggc gcggattttc cgctggttac ggtgaaggac tgggtaaaat cccaagccgc
    33661 gcttgccgat tatctcagca tcgggcaatg ggcggcggtt gtcggcggca gcttgggcgg
    33721 catgcaggct ttgcagtggg cgatttccta tcccgaacgc gtgcgccacg ccttggtgat
    33781 tgcgtccgcg ccgaaactgt ccacgcaaaa tatcgcgttc aacgatgtgg cgcgtcaggc
    33841 gattttgacc gatcccgatt tcaacgaagg acattaccgc agccgcaaca ccgttcccgc
    33901 tcggggcttg cggattgccc gcatgatggg gcacatcacc tatcttgccg aagacggttt
    33961 gggcaaaaaa ttcggacgcg atttgcgttc caacggctat caatacggct atggcgttga
    34021 atttgaagta gaatcctatc tgcgctatca aggcgacaaa ttcgtcgggc ggtttgatgc
    34081 caacacctat ttgctgatga ccaaggcttt ggactatttc gatccggcgg cagatttcgg
    34141 cgacagcctg acccgcgccc tgcaaaatgt gaaagcgaaa ttctttgtcg ccagcttcag
    34201 caccgactgg cgtttcgcac ccgaacgttc gcacgaactg gtcaaggcac tgattgccgc
    34261 ccaaaaatcc gtgcagtata tcgaagttaa atccgcacac gggcacgatg cctttttaat
    34321 ggaagacgaa gcctatatgc gtgcggtcgc cgcctatatg aacaacgttt ataagggatg
    34381 tcagcaatga acctgcgcga tgatttgcaa ctgatttacg accggatacc cgaaggcagc
    34441 cgcgtcttgg acttgggctg cggcgacggc gaactgcttg ccgcattggt cgaacacaaa
    34501 aaatgcagcg gctacggcat cgaaatcgac accgacagcg tgattgccgc gatgtcgcgc
    34561 ggcgtgaatg ttatccaagc cgatttggaa gaaggtttaa ccgcattcaa cgatcaaagt
    34621 tttgatgtga ttgtgttgag ccaaaccatc caagcgatgc agaataccga aaaaatcctg
    34681 cgctgcctga tgcgcgttgc caaacaggcg attgtcagct tcccgaattt cggctactgg
    34741 cgcaaccgtg tccaaatcgc actcggcgga catatgccgg tttccgaacg tatgccctac
    34801 cattggtacg acacgcccaa tatccattgg tgcacgctca aagactttga tttgttgtgc
    34861 gccaaaaaca acatccgcgt cctcgaacgc gccgtgatga cgggcaacag acaggtcaaa
    34921 catttcccca accttttggg cagcctggcg ttttaccgcg tcgggtaaga caggttgaga
    34981 accttgtcgg caataacagg ttcttcggtt ctattaacaa caggccgtct gaaaaatgaa
    35041 acggcaggtt ttcagacggc ctttttaata ttggaaacaa tagaatgaaa aacaaaacct
    35101 catcacttct cttatggctt gccgcaatca tgctgaccgc gtgttccccg aacaaagaag
    35161 ataaaaccaa agaaaccggc gcatctgccg cttcgtcccc ggcatccgcc gcttcgtctt
    35221 ccgcgcccca aaccgatttg caaccggccg catccgcccc tgataacgtc aagcaggcag
    35281 aaagcgcgcc gccgtcaaat tgcaccgacc tgcaccccgc caccggcatt gacgatctca
    35341 tgcagcaaat cgccgaacac atcgactcgg actgtctgtt tgccctttcc catcacgaac
    35401 tggaaacccg tttcggctta cccgacagtg gctatgacaa catacagcgg ctgctgtttc
    35461 ccgacatccg ccctgaagat cccgactacc atcagaaaat catactggca attgaagact
    35521 tgcgttacgg aaagcgcacg atcagccggc aggcacaaga tgccttgatg gaacaggaac
    35581 gccgcctccg agaagcgacg ctgttgctga cacagggcag cgaagaaacc cgcgggcaag
    35641 gcgaggagcc gaaacgcacg cgttattttg aagtttcggc aacccctgcc tattcgagcc
    35701 ggcacaacaa cggacttggc ggcaatttcc aatacatcgg ccaattgccc ggctatctga
    35761 aaatacacgg agaaatgctt gaaaaccaat cactcttccg gctgtccaac cgtgaacgca
    35821 atcccgacaa accgttttta gacatccatt ttgacgaaaa tggcaaaatc acgcgtattg
    35881 tcgtttacga aaaaaacatc tacttcaatc caaacttggg gcgaagataa aaaaatgccg
    35941 tctgaaagcc tttcagacgg catttttcaa gtaggatatc aggcgcgttt gcggaattcg
    36001 ccggtgcggg tatcgatttc gactttgtcg ccgttttcga tgtaagacat cacttggatt
    36061 tcggtgccgc cgaccagacg cgcggttttc atcactttgc cggaagtgtc gcctttgaca
    36121 gcaggctcgg tgtactcgac ttcgcgtacg atgatggtag gcagttcgac agaaatgggg
    36181 ttgccttcgt agaaggtaac ttcgcattgg tcttccatac cgtcaacgat gaatttcaac
    36241 gcgtcgccga tgttgtcggc ttcgatttcg tattggttga attcttcgtc cataaagacg
    36301 tacatcgggt cggcaaaata gctgtacgta cagtttttgc gggacaggat gaccacgtcg
    36361 aatttgtcgt cggctttgta aatggtttcg gaagccgcgc cggtcagcag gtttttcagt
    36421 ttcatgctga ctttggcgga agagcggccg cctttgatgt attcggtttt ttgaacgacc
    36481 ataggatcgt tgccgaccat aaatacattg ccggcgcgca gttcttgtgc tgttttcatt
    36541 gtgattttcc aatcaaatcg gttgtcgtaa aacgcgctat tctagcgtat tttttgatgc
    36601 tttgaaacaa aggcggcgag tttttcggat gcggaaggct gcccgaaaag ataacggctc
    36661 caatcctccg cgccttgccg ccagccgttt tgatgttgtt gcagggtttg ccaacattcg
    36721 aggcgttgcg tggcggataa agcctctccg ccgttgaggt cgtctgaaag gcggcggtgt
    36781 accgatgcgg tttcgggcga gtaaaatcca tgcgccttat cccaaaaggc gtggagttta
    36841 tcgagatgga cattctcgtc ttgcgggtag atgtgccaaa agaagggttt gccggcaagc
    36901 tgggcgcgca cgaaactgtc ttcgccgcgt atcacggcgc agtcggcgag gtgcagcagt
    36961 ttgtcgaagt cctgttgcgg cacgaaaggg attttgacga ggcggacgga tgccgtctga
    37021 aaaacatcgc cgtcgttttg cagggcatct tgcggaataa cgccgctttg tttgaggctg
    37081 tcgatgattt gcgtccccgc cagcaacagt gtcatcgggc tgcctgcctg tcgccacatt
    37141 tccagccact ttgcccaaac atcgctccga tagccgaaaa gcagccattc gggggcgttt
    37201 ttttcgggaa gcatcagccg ctctcgcaag gcttcggtat cgaaacggac ggcatttcgg
    37261 taatcgcgtt cgcgtatcaa cccgccgctt ttttcgctga aacccataaa ccaaaaatat
    37321 ttttgaacac tctcctgcag cgaaggcatc agatgcagcc tttcattgct ttcttccgcg
    37381 ctcaaatatt cccaattcag ccaaagcggc ttgtgtcggc ggatgatgtg cagcacattt
    37441 tcgggcaggt cgcaggcaaa agtttcgata acgatatcgg gaacaagggc agtatcgata
    37501 tccgccgcat cggaatgcca agtgcggaca tgaatatcct gatgaacgca gggaacatcg
    37561 ggcaaatcag ggcaaagcgc acgcaaggcg gacacatcgt ccgtccacaa atgcacctgc
    37621 caaccgagtt cgcggtgcaa aacacgggcg agccgccacg aaacgccgat gtcgccgaaa
    37681 ttgtcgatga ccttgcaaaa aatccaacag acaaaaggag gagtattcat agaaataacg
    37741 gaaacaagct aaaacgcgcc gaaatagtgg aacaaataca caatcagcaa aataatcgga
    37801 ataaacagca acatagtttg acgtttcaaa tcaaactctt gtttcaaatg atgcttgatg
    37861 gtgtcgaaaa ggacgaattt aaacaaaaac gtcgcttcgc aggcaaggat gatgccgttg
    37921 atcagatgct ggagtttgtc ttcgggcgga ttggcggcga aaacggcaag cgtcgccaac
    37981 gggatgaggc agacggcaag ccaacggaca agcaggtttc gagacattgc aaggctttca
    38041 aaaaaagcaa aacgccatta tcgccccaag cgcacgcctt gtctaacgga cgcaccggag
    38101 atgccgtctg aagccttgcc gcaggaaaac accgcaccgc cgaaccttta aatacgcccg
    38161 agacgggcgt tccccgaaaa atcggacgct gccgccgatg cctgaggaca aggcggcagc
    38221 aggcacgggc atattgaaaa cccggcgcgt cggtttga
//
LOCUS       DBBZXU010000006        38243 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.006, whole genome shotgun sequence.
ACCESSION   DBBZXU010000006 DBBZXU010000000
VERSION     DBBZXU010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 38243)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38243)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38243
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.006"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(175..867)
                     /locus_tag="ACJJDE_000262"
     CDS             complement(175..867)
                     /locus_tag="ACJJDE_000262"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HGG7540255.1"
                     /translation="MKRFTYTLSDGLCIEIELKRSAKKNLILRPVNMQTVSINVPPFF
                     QDHALANWLAANETILRNTLAKTPVHPVSHPNLPEWIWYRGIKTKLDTHSQSHIRITS
                     SEILLPRKETAAQIDHLRRLLNERAREYLLPRLEKHAAETGLTPTATDLSNAKTFWGV
                     CRPHTGIRLNWRLIGTPEYVADYVCIHELCHLRHPDHSPRFWHLVNTLTPHTDNAKSW
                     LKAHGRELFVLG"
     gene            complement(975..2168)
                     /locus_tag="ACJJDE_000263"
     CDS             complement(975..2168)
                     /locus_tag="ACJJDE_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7540256.1"
                     /translation="MSNQKNRRNALIGAAFLMATSAIGPGFLTQTATFTQALAASFGF
                     VILLSILLDIGAQLNIWRIVAVSEKQAQDIANQVLPGAGYFLAVLIVMGGLAFNIGNV
                     GGAGLGLNLLTGLSPETGAVISGVIAIGVFLFKEAGKVMDKFAQVMGFVMIALTVYVA
                     WQANPPLADAAVHTFMPEKLDAMAIVTLVGGTVGGYITFAGAHRLLDAGIKGKSALPE
                     VSQSSVRAILIASIMRIVLFLAVLGVVSQGVQLNPDNPASTPFEYAAGYIGLLIFGVV
                     IWAASITSVIGAAYTSVSFFSGLSPSIERNKNKWIIAFIAVSTAVFSTIGKPAQVLVF
                     VGALNGLILPISLGLILIAAYKTKIVGDYKHPLWLTVSGVIVVGLMAVLSAITISKYI
                     GGLFG"
     gene            complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACJJDE_000264"
     CDS             complement(2297..3034)
                     /gene="pxpA"
                     /locus_tag="ACJJDE_000264"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HGG7540257.1"
                     /translation="MKQVDLNADLAEGCGSDEALLQLITSANIACAQHAGSIADIRAA
                     LAYAQQNGVRIGAHPGYPDRENFGRTEMNLSEADLRACLNYQLGALQALCRDQGLEMA
                     YVKPHGAMYNQAAKNRALADTVARIVADFDPKLKLMALSGSLLLEAGKAAGLGVISEV
                     FADRRYMPDGTLVPRSRPDAQVDSDEEAIAQVLQMVRDGQVKAVDGSLVAVQADSICL
                     HGDGPHAVVFAEKIRQELLAAGIKVSA"
     gene            complement(3021..3950)
                     /locus_tag="ACJJDE_000265"
     CDS             complement(3021..3950)
                     /locus_tag="ACJJDE_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HGG7540258.1"
                     /translation="MIHVSAVQAPAHIQDTGRYGHRRYGIGHAGAMDTVALAAGNILL
                     GNDEGTAAIEIALGGIMLVFERDTPFCLTGAVYQAELDGEPVYSYWRYTARKGQTLKM
                     VRAVQGMYGYVCVAGGFDVPEVMGSRSTDLKAGFGGHQGRMLQKGDYLPIGKGAQELS
                     KVGIAPIPFTDTVHLVPSSEYAAFSEKGRLNLERETWTLQSDSNRMGYRFDGQPLTLS
                     QPLEMLSHAVQAGTVQVPPGGKPIILLADAQTTGGYPKIATVAAADLGRLAQVRFGSK
                     VKFKIIGLKEATALRRKNQAYLNQIRRITHEAG"
     gene            complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACJJDE_000266"
     CDS             complement(3947..4594)
                     /gene="pxpB"
                     /locus_tag="ACJJDE_000266"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017168 - 5-oxoprolinase (ATP-hydrolyzing)
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HGG7540259.1"
                     /translation="MRIEITPISESALVCRLNAPSELGKQQKLWAFAAALGQHDRIEE
                     VVVGMNNLTVFTRFDTDLATLADELQYVWEHTAVTDHQGKLVEIPVCYGGEYGPDLAE
                     VAAFHQTVISEIVRRHTAQTYTVFMMGFQPGFPYLGGLPEALHTPRRAVPRTSVPAGS
                     VGIGGSQTGVYPFASPGGWQIIGRTELPLFRADLNPPTLLAAGDQVRFVAERIEP"
     gene            4778..6985
                     /gene="uvrD"
                     /locus_tag="ACJJDE_000267"
     CDS             4778..6985
                     /gene="uvrD"
                     /locus_tag="ACJJDE_000267"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HGG7540260.1"
                     /translation="MFPDQSAPNLLQGLNPEQLSAVTWPPQSALVLAGAGSGKTRVLT
                     TRIAWLLQTGQASVHSIMAVTFTNKAAKEMQTRLGAMIPVDVRAMWLGTFHGLCHRFL
                     RLHHRDAGLPSSFQILDGGDQLSLIKRLLKSLNIAEEIIAPRSLQGFINAQKESGLRA
                     SVLSAPDPHTSRMIECYAEYDKICQREGVVDFAELMLRSYEMLQSNEILRQHYQNRFN
                     HILVDEFQDTNKLQYAWLKLMAGGNAAVFAVGDDDQSIYRFRGANVGNMTALMEEFHI
                     DAPVKLEQNYRSVGNILAAANAVIENNDERLGKNLRTDAEAGDKIRYYSAFTDLEEAR
                     FIVDETKALEREGWDLDEIAVLYRSNAQSRVIEQSLFRSGIPYKIYGGLRFYERQEIK
                     HALAYLRLAVNPDDDNALLRVINFPPRGIGARTVENLQTASNEQGITLWQAACNAGAK
                     AAKIAAFVRLIEALRNQVGQLPLSEIIVGILKDSGLTEHYRTQKGDNQDRLDNLDELV
                     NAAIEFKPEDSNFETLPENISDDPAFPILAFLSNAALESGENQAGAGEKAVQLMTVHA
                     AKGLEFNAVFLTGMEEGRFPSEMSLAERGGLEEERRLMYVAITRARKRLYITMAQQRM
                     LHGQTQFGIVSRFVEEIPPEVLHYLSVKKTAYDSYGSPRQTAASKDKIIDDYKQPQTY
                     AGFRIGQNVRHAKFGTGVIIDAADKGESARLTINFGKQGVKELDTKFAKLEAM"
     gene            7342..7881
                     /locus_tag="ACJJDE_000268"
     CDS             7342..7881
                     /locus_tag="ACJJDE_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7540261.1"
                     /translation="MSQVFKDFDLSSVWESDSWADENYKEAPFTPEILAAVESELGYK
                     LPQSFIELMAVQNGGIFVKNCFPTTQRNSWAKDHVQICEVSGIGFEKEGSLCGETGQK
                     LWMEEWEYPPIGVYFANDPSGGHAMFALDYRACGKDGEPKVVFVEQESDFEIVELAPD
                     FETFIRSLRHEDEFIDEEI"
     gene            complement(8071..8286)
                     /locus_tag="ACJJDE_000269"
     CDS             complement(8071..8286)
                     /locus_tag="ACJJDE_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540262.1"
                     /translation="MNIINYTGDDIIISLTREELQLLRSLVIEIYAGVCIDAEEFEIV
                     SGIRNSKLVQELEQQLIEAYDLMDTKG"
     gene            complement(8410..8769)
                     /locus_tag="ACJJDE_000270"
     CDS             complement(8410..8769)
                     /locus_tag="ACJJDE_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7540263.1"
                     /translation="MIKLDLKSINLYDIDFEKFTPEIPDNFHRWIDLDIGIEGEQGSS
                     IFSLCICSPKWISHHCNKEGFFWSNALILEQFDHKIIKSEIDKILEYCSKETWDLTLS
                     NLLRFFSWEFEDYNPNT"
     gene            8822..9199
                     /locus_tag="ACJJDE_000271"
     CDS             8822..9199
                     /locus_tag="ACJJDE_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7540264.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTATEPDSIVYTDCYRSYDV
                     LDVSEFSHFRINHSTHFAERQNHINGIENFWSQAKRHLRKFNGIPKAHFELYLKECEW
                     RFNNSEIKVQISILKQLVKSSLS"
     gene            9398..10018
                     /locus_tag="ACJJDE_000272"
     CDS             9398..10018
                     /locus_tag="ACJJDE_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7540265.1"
                     /translation="MNSTASKTLKGLSLVFFASGFCALIYQVSWQRLLFSHIGIDLSS
                     ITVIISVFMVGLGVGAYFGGRIADRFPSSIIPLFCIAEVSIGLFGLVSRGLISGLGHL
                     LVEADLPIIAAANFLLLLLPTFMMGATLPLLTCFFNRKIHNVGESIGTLYFFNTLGAA
                     LGSLAAAEFFYVFFTLSQTIALTACFNLLIAASVWLRYRKDGYSEH"
     gene            10041..11492
                     /locus_tag="ACJJDE_000273"
     CDS             10041..11492
                     /locus_tag="ACJJDE_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused MFS/spermidine synthase"
                     /protein_id="HGG7540266.1"
                     /translation="MLSFLSGLLSLGIEVLWVRMFSFAAQSVPQAFSFTLACFLTGIA
                     VGAYFGKRICRSRFVDIPFIGQCFLWAGIADFLILGAAWLLTGFSGFVHHAGIFITLS
                     AVVRGLIFPLVHHVGTDGNKSGRQVSNVYFANVAGSALGPVLIGFVILDFLSTQQIYL
                     LICLISAAVPLFCTLFQKSLRLNAVSVAVSLMFGILMFLLPDSVFQNIADRPDRLIEN
                     KHGIVAVYHRDGDKVVYGANVYDGAYNTDVFNSVNGIERAYLLPSLKSGIRRIFVVGL
                     STGSWARVLSAIPEMQSMIVAEINPAYRSLIADEPQIAPLLQDKRVEIVLDDGRKWLR
                     RHPDEKFDLILMNTTWYWRAYSTNLLSAEFLKQVQSHLTPDGIVMFNTTHSPHAFATA
                     VHSIPYAYRYGHMVVGSATPVVFPNKELLKQRLSRLIWPESGRHVFDSSTVDAAAQKV
                     VSRMLIQMTEPSAGAEVITDDNMIVEYKYGRGI"
     gene            11955..12311
                     /locus_tag="ACJJDE_000274"
     CDS             11955..12311
                     /locus_tag="ACJJDE_000274"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HGG7540267.1"
                     /translation="MLSAYFPVFVFILVGLAAGVLFILLGTILGPKRHYAEKDAPYEC
                     GFEAFENARMKFDVRYYLVAILFILFDLEVAFMLPWAVVFKDLGAYGFWSMLVFIVVL
                     TVGFVYEWKKGALEWE"
     gene            12302..12784
                     /locus_tag="ACJJDE_000275"
     CDS             12302..12784
                     /locus_tag="ACJJDE_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045271 - respiratory chain complex I
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HGG7540268.1"
                     /translation="MGIEGVLKKGFITTSADTVLNYMRTGSLWPVTFGLACCAVEMMH
                     AGMARYDLDRFGIIFRPSPRQADLMIVAGTLTNKMAPALRRVYDQLAEPRWVLSMGSC
                     ANGGGYYHYSYSVVRGADRVVPVDVYVPGCPPTAEALIYGLIQLQQKIKRTSTIARDE
                     "
     gene            12797..13390
                     /locus_tag="ACJJDE_000276"
     CDS             12797..13390
                     /locus_tag="ACJJDE_000276"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HGG7540269.1"
                     /translation="MASIQNLYETVVGVLGDQASKVISALGEITVECLPEHYVSVMTT
                     LRDHEELHFELLVDLCGVDYSTYKNEVWQGKRFAVVSQLLSVKNNQRIRVRVWVSDDD
                     FPVVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISGY
                     VEMRYDEEQKRVIYQPVTIEPREITPRIVREENYGGQ"
     gene            13380..14636
                     /gene="nuoD"
                     /locus_tag="ACJJDE_000277"
     CDS             13380..14636
                     /gene="nuoD"
                     /locus_tag="ACJJDE_000277"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH dehydrogenase (quinone) subunit D"
                     /protein_id="HGG7540270.1"
                     /translation="MANKLRNYTINFGPQHPAAHGVLRMILELDGEQIVRADPHIGLL
                     HRGTEKLAETKTYLQALPYMDRLDYVSMMVNEQAYCLAVEKLAGIDVPIRAQYIRVMF
                     AEVTRILNHLMGIGSHAFDIGAMTAILYAFRDREELMDLYEAVSGARMHAAYFRPGGV
                     YRDLPDFMPKYEGSKFRNAKVLKQLNESREGTMLDFIDAFCERFPKNIDTLETLLTDN
                     RIWKQRTVGIGVVSPERAMQKGFTGVMLRGSGVEWDVRKTQPYEVYDKMDFDIPVGVN
                     GDCYDRYLCRMEEMRQSVRIIKQCSEWLRVNPGPVITTNHKFAPPKRTEMKTGMEDLI
                     HHFKLFTEGMHVPEGETYTAVEHPKGEFGVYIISDGANKPYRLKIRAPGFAHLQGMDE
                     MAKGHMLADVVAIIGTQDIVFGEVDR"
     gene            14636..15109
                     /gene="nuoE"
                     /locus_tag="ACJJDE_000278"
     CDS             14636..15109
                     /gene="nuoE"
                     /locus_tag="ACJJDE_000278"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HGG7540271.1"
                     /translation="MLSAESLKQIDIELAKYPADQRRSAIMGALRIAQTEKGWLAPET
                     IAFVADYIGISPAQAYEVATFYNMYDLEPVGKYKLTVCTNLPCALRGGMATGEYLKQK
                     LGISYGETTPDGKFTLVEGECMGACGDAPVMLLNNHKMCSFMTEEAIEKKLAELE"
     gene            15499..16800
                     /gene="nuoF"
                     /locus_tag="ACJJDE_000279"
     CDS             15499..16800
                     /gene="nuoF"
                     /locus_tag="ACJJDE_000279"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HGG7540272.1"
                     /translation="MAIYQSGVIFDQVDTANPDCWTLDEYVKRGGYTALRKILSENIS
                     QTDVIDEVKTSGLRGRGGAGFPTGLKWSFMPRSFPGEKYVVCNTDEGEPGTFKDRDII
                     MFNPHALIEGMIIAGYAMGAKAGYNYIHGEIFEGYQRFEAALEQARAAGFLGKNILGS
                     DFEFELFAHHGYGAYICGEETALLESLEGKKGQPRFKPPFPASFGLYGKPTTINNTET
                     FSSVSFIIRDGGQAFADKGIPNAGGTKLFCISGHVERPGNYEVPLGTPFAEVLKMAGG
                     MRGGKKLKAVIPGGSSAPVLPADIMMQTNMDYDSISKAGSMLGSGAIIVMDEDVCMVK
                     ALERLSYFYYDESCGQCTPCREGTGWLYRIVHRIVEGKGKMEDLDLLDSVGNQMAGRT
                     ICALADAAVFPVRSFTKHFRDEFVHYIEHGGPMKEHKWGGW"
     gene            16800..17237
                     /locus_tag="ACJJDE_000280"
     CDS             16800..17237
                     /locus_tag="ACJJDE_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540273.1"
                     /translation="MVEAKIFILYGAANKGKSTTLNTLFNQICRKFSKFLVFFERHGN
                     GLDFVAVFDHEGQRIGFYSSGDNEYEVRRNLYKLYSHNCDFIFGTSRTRGGSCDAVGC
                     YAELLHGDVNIINWCEKFEPTDEDNERAVKELFKSFKNIINKL"
     gene            17527..19788
                     /gene="nuoG"
                     /locus_tag="ACJJDE_000281"
     CDS             17527..19788
                     /gene="nuoG"
                     /locus_tag="ACJJDE_000281"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH:ubiquinone reductase
                     (non-electrogenic) activity [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HGG7540274.1"
                     /translation="MLQIEIDGKQVSVEQGATVIEAAHKLGTYIPHFCYHKKLSIAAN
                     CRMCLVNVEKAPKPLPACATPVTDGMIVRTHSAKAREAQEGVMEFLLINHPLDCPTCD
                     QGGECQLQDLAVGYGKTTSRYTEEKRSVVGKDMGPLVSAEEMSRCIHCTRCVRFTEEI
                     AGLQEIAMVNRGEHSEIMPFIGKTVETELSGNVIDLCPVGALTSKPFRFNARTWELNR
                     RKSVSAHDALGSNLIVQTKDHTVRRVLPLENEAINECWLSDRDRFAYEGLYHESRLKN
                     PKIKQGGEWMDVDWKTALEYVRSAIECIAKDGNQNQVGIWANPMNTVEELYLAKKLAD
                     GLGVKNFATRLRQQDKRLSDGIKGAQWLGQSIESLADNDAVLVVGANLRKEQPLLTAR
                     LRRAAKDRMALSVLAGSKEELFMPLLFQEAAHPDEWAGRLKNLSANAEHAVTASLKNA
                     EKAAVILGAEVQNHPDYAAIYAAAQELADATGAVLGILPQVANSVGADVLGVNSGESV
                     AEMANAPKQAVLLLNVEPEIDMVDGAKAVAALKQAKSVMAFTPFVSETLLDVCDVLLP
                     IAPFTETSGSFINMEGRLQSFHGVVQGFGDSRPMWKVLRVLGNLFDLQGFEYHDTAAI
                     LKDALDAESLPSKLDNRSTWTGEGVQTASDRLVRVGGVGIYHTDSIVRRSAPLQATVH
                     AAVPAARVNPNTLGRLGLQDGQTAVAKQNGASVSVAVKADAGLPENVVHLPLHTENAA
                     LGALMDTIELAGA"
     gene            19791..20867
                     /gene="nuoH"
                     /locus_tag="ACJJDE_000282"
     CDS             19791..20867
                     /gene="nuoH"
                     /locus_tag="ACJJDE_000282"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HGG7540275.1"
                     /translation="MQEWFQNLFAATLGLGDLGITVGLVVSVIVKIVIILIPLILTVA
                     YLTYFERKVIGFMQLRVGPNVTGPWGLIQPFADVFKLLFKEVTRPKLSNKALFYIGPI
                     MSLAPSFAAWAVIPFNEEWVLTNINIGLLYILMITSLSVYGVIIAGWASNSKYSFLGA
                     MRASAQSISYEIAMSAALVCVVMVSGSMNFSDIVAAQAKGIAGGSVFSWNWLPLFPIF
                     IVYLISAVAETNRAPFDVAEGESEIVAGHHVEYSGFAFALFFLAEYIFMILIAALTSL
                     MFLGGWLSPFPQSWGFIGTPSAFWMFVKMAAVLYWYLWIRATFPRYRYDQIMRLGWKV
                     LIPIGFAYIVILGVWMISPLNLWK"
     gene            20948..21427
                     /gene="nuoI"
                     /locus_tag="ACJJDE_000283"
     CDS             20948..21427
                     /gene="nuoI"
                     /locus_tag="ACJJDE_000283"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HGG7540276.1"
                     /translation="MANLVKTFLLGELVKGMGVTLKNFFARKDTIYFPEEKTPQSVRF
                     RGLHAQRRYPNGEERCIACKLCEAVCPAMAINIESEEREDGTRRTKRYDIDLTKCIFC
                     GFCEEACPTDAIVETHIFEYHGEKKGDLHMTKPILLAIGDKYEAEIAKRKAADAPYR"
     gene            21439..22110
                     /locus_tag="ACJJDE_000284"
     CDS             21439..22110
                     /locus_tag="ACJJDE_000284"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HGG7540277.1"
                     /translation="MTFSAILFYILAAIVLYGAVRTVTAKNPVHAALHLVLTFCVSAM
                     LWMLMQAEFLGVTLVVVYVGAVMVLFLFVVMMLNIDIEEMRAGFWRHAPVAGVVGTLL
                     AVALILILVNPKTDLAAFGLMKDIPADYNNIRDLGSRIYTDYLLPFELAAVLLLLGMV
                     AAIALVYRKTTNPKRMDPADQVKVRADQGRMRLVKMEAVKPQVESAEESEVSDGLKPE
                     GEGKA"
     gene            22107..22412
                     /gene="nuoK"
                     /locus_tag="ACJJDE_000285"
     CDS             22107..22412
                     /gene="nuoK"
                     /locus_tag="ACJJDE_000285"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HGG7540278.1"
                     /translation="MITLTHYLVLGALLFGISAMGIFMNRKNVLVLLMSIELMLLAVN
                     FNFIAFSQHLGDTAGQIFVFFVLTVAAAESAIGLAIMVLVYRNRQTINVADLDELKG"
     gene            22446..23021
                     /gene="fic"
                     /locus_tag="ACJJDE_000286"
     CDS             22446..23021
                     /gene="fic"
                     /locus_tag="ACJJDE_000286"
                     /EC_number="2.7.7.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0070733 - AMPylase activity [Evidence
                     IEA];
                     GO_process: GO:0018117 - protein adenylylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein adenylyltransferase Fic"
                     /protein_id="HGG7540279.1"
                     /translation="MPSENPIGKTMKSIDEQSLHNARRLFESGDIDRIEVGTTAGLQQ
                     IHRYLFGGLYDFAGQIREDNISKGGFRFANAMYLKEALVKIEQMPERTFEEIIAKYVE
                     MNIAHPFLEGNGRSTRIWLDLVLKKNLKKIVNWQNVSKTLYLQAMERSPVNDLELRFL
                     LKDNLTDDVDNREIIFKGIEQSYYYEGYEKG"
     gene            23145..23486
                     /locus_tag="ACJJDE_000287"
     CDS             23145..23486
                     /locus_tag="ACJJDE_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540280.1"
                     /translation="MMDKNQLEQEFHKAMLNIYQEALNLPQPYKATRFLQIVNEFGGK
                     EAADKLLSTGEKKTQTGFTELILSGGGVHALKYSMEYLVLQKPWCDLFTEEQLAVARK
                     RLERVGFVFPK"
     gene            23535..25571
                     /gene="nuoL"
                     /locus_tag="ACJJDE_000288"
     CDS             23535..25571
                     /gene="nuoL"
                     /locus_tag="ACJJDE_000288"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HGG7540281.1"
                     /translation="MNDMTLYLIIALVPLAGSLIAGLFGNKIGRAGAHTVTILGVAVS
                     AVLSAYVLWGFLNGSRAKFDENVYTWLTMGGLDFSVGFLVDTMTAMMMVVVTGVSLMV
                     HIYTIGYMHDEKVGYQRFFSYISLFTFSMLMLIMSNNFIQLFFGWEAVGLVSYLLIGF
                     YFKRPSATFANLKAFLINRVGDFGFLLGIGLVLAYFGGSLRYQDVFAYLPNVQNATIQ
                     LFPGVEWSLITVTCLLLFVGAMGKSAQFPLHVWLPDSMEGPTPISALIHAATMVTAGL
                     FMVSRMSPIYEMSSTALSVIMVIGAITALFMGFLGVIQNDIKRVVAYSTLSQLGYMTV
                     ALGASAYSVAMFHVMTHAFFKALLFLAAGSAIIGMHHDQDMRHMGNLKKYMPITWLTM
                     LIGNLSLIGTPFFSGFYSKDSIIEAAKYSTLPGSGFAYFAVLASVFVTAFYAFRQYFM
                     VFHGEEKWRSLPEHHDDHHGDHHGEEHHSLGKNDNPHESPLVVTLPLILLAIPSVIIG
                     YVAIEPMLYGDFFKDVIFVNADAHPTMHIMKEEFHGALAMVSHSLHSPVLYLAIAGVL
                     SAWLLYVKLPHLPAKIAQTFRPIYVLFENKYYLDALYFNVFAKGTRALGTFFWKVGDT
                     AIIDNGIVNGSAKLVGAIAAQVRKAQTGFIYTYAAAMVFGVLVLLGMTFWGLFR"
     gene            25660..27156
                     /locus_tag="ACJJDE_000289"
     CDS             25660..27156
                     /locus_tag="ACJJDE_000289"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HGG7540282.1"
                     /translation="MFSNYLLSLAIWIPIAAGVLVLSTGKDSRAPLARVLAFMGALAG
                     FLVTLPLFTGFDRLSGGYQFTEFHEWIPLLKINYALGVDGISVLFIILNAFITLLVVL
                     AGWEVIQKRPAQYMAAFLMMSGLINGAFAAQDAILFYVFFEGMLIPLYLIIGVWGGPR
                     RVYASVKLFLYTLMGSLLMLVAMVYLYYQTGSFSIVDFQNIKQIPLGVQQLLFAAFFL
                     SFAVKVPMFPVHTWLPDAHVEAPTGGSMVLAAITLKLGAYGFLRFILPIMPDAARYFA
                     PVIIVLSLIAVIYIGMVALVQTDMKKLVAYSSISHMGFVTLGMFLFVNGQLNDWALKG
                     AIIQMISHGFVSAAMFMCIGVMYDRLHTRNIADYGGVVNVMPKFAAFMMLFGMANAGL
                     PATSGFVGEFMVIMGAVKVNFWVGALAAMTLIYGASYTLWMYKRVIFGAIHNPHVAEM
                     KDINCREFTILAVLAVAVLGMGLYPNAFIEVVHQAANDLIAHVAQSKI"
     gene            27166..28611
                     /gene="nuoN"
                     /locus_tag="ACJJDE_000290"
     CDS             27166..28611
                     /gene="nuoN"
                     /locus_tag="ACJJDE_000290"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HGG7540283.1"
                     /translation="MNWSDLNLMPAMPEIVLLALLVLLLLADLWVSDDKRRWTHYGAL
                     ATVAVTAVVQLAVWEQGSTSSFNGMYIADGMSRLAKMVLYALMFTLFVYAKPYNQVRG
                     IFKGEFYTLSLFALLGMGVMVSAGHFLTAYIGLELLSLALYALIALRRDSGFAAEAAL
                     KYFVLGALASGLLLYGISMVYGATGSLEFAGVLASSFNEEANEWLLKLGLVFIVVAVA
                     FKLGAVPFHMWVPDVYHGAPTSVTALVGTAPKIAAVVFAFRILVTGLGTVHHDWSLMF
                     ALLAAASLLVGNLAAIMQTNIKRMLAYSTVSHMGFILLAFMAGAVGFAASLYYAITYA
                     LMAAAGFGVLMVLSDGDNECENISDLAGLNQHRVWLAFLMLLVMFSMAGIPPLMGFYA
                     KFGVIMALLKQGYVWLSVFAVVMSLIGAFYYLRVVKVMYFDESGRARPAAGGNNAAKF
                     LLSINALLLVLWGIMPQTVIDWCAKALENTL"
     gene            28723..29022
                     /locus_tag="ACJJDE_000291"
     CDS             28723..29022
                     /locus_tag="ACJJDE_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2818 family protein"
                     /protein_id="HGG7540284.1"
                     /translation="MTASMYILLVLALIFANAPFLTTRLFGVAALKRKHFGHHMIELA
                     AGFALTAILAYILESRAGSVHDQGWEFYATVVCLYLIFAFPCFVWRYFWHTRNRE"
     gene            complement(29131..30027)
                     /locus_tag="ACJJDE_000292"
     CDS             complement(29131..30027)
                     /locus_tag="ACJJDE_000292"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004659 - prenyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HGG7540285.1"
                     /translation="MNPTNDLKAWQQRAQAQTELLLERFLPSENEIPHTLHEAMRYAV
                     LDGGKRLRPMLVLAASELGEAVHEAVEQAMAAIEMIHAYSLVHDDMPAMDNDSLRRGK
                     PTCHIKYGEATALLVGDALQTQAFDVLSRPTELPAARQLAMLSVLAKAGGSAGMAGGQ
                     AIDLANVGKQMVQADLEQMHSLKTGALIRAAVLLGAMSCPNLSEDSLAVLDDYAAKLG
                     LAFQVIDDVLDCEADTATLGKTAGKDADNDKPTYVKLMGLEAARSYAHKLVAEAVALL
                     EPFGDKALRLRQLAEFAVARKY"
     gene            complement(30011..30274)
                     /locus_tag="ACJJDE_000293"
     CDS             complement(30011..30274)
                     /locus_tag="ACJJDE_000293"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HGG7540286.1"
                     /translation="MSKWRGFNRKGNTMKKNAPKSFEEALSRLESLTQAMQGEMPLED
                     ALAAYQEGNELVRYCQTKLAQVEQKLQVLDADGPKELNLESDE"
     gene            complement(30383..30472)
                     /locus_tag="ACJJDE_000294"
                     /pseudo
     CDS             complement(30383..30472)
                     /locus_tag="ACJJDE_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676973.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
     gene            complement(30496..31419)
                     /gene="rsgA"
                     /locus_tag="ACJJDE_000295"
     CDS             complement(30496..31419)
                     /gene="rsgA"
                     /locus_tag="ACJJDE_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HGG7540287.1"
                     /translation="MPSEHPFSDGISTPNPKETMNDTAQITASYGRRYIVRTPDGTTY
                     EASTRKKRVDFACGDRVRISPVNAEQVVIEDFLPRQSLLYRQDAWKTKLIAANVTQLL
                     IVTAAVPSPSVRLLQRALLAAEAAGIRAVIVLNKADLPETALWREKLKFYETLGYPVI
                     ETRALENAGSLRPALQGHSNILLGQSGMGKSTLTNALLGSQTARTGDISAALDSGKHT
                     TTHARLYDLNGETQLIDSPGLQEFGLHHLQAADLPRYFPDFRHLVGQCRFHNCTHRAE
                     PGCAFKAAAQTGAASPERLAFLQGITDELPG"
     gene            complement(31424..33280)
                     /locus_tag="ACJJDE_000296"
     CDS             complement(31424..33280)
                     /locus_tag="ACJJDE_000296"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7540288.1"
                     /translation="MLNKIFSWFESRIDPYPEAAPKTPEKGLWRFVWSSMAGVRKWIA
                     ALAALTAGIGIMEALVFQFMGKIVEWLGKYAPAELFAEKGWELAAMAAMMVFSVAWAF
                     AASNVRLQTLQGVFPMRLRWNFHRLMLNQSLGFYQDEFAGRVSAKVMQTALALRDAVM
                     TVADMVVYVSVYFITSGVILASLDSWLLLPFIGWIVGFASVMRLLIPKLGQTAAWQAD
                     ARSLMTGRITDAYSNIATVKLFSHGAREAAYAKQSMEEFMVTVRAQMRLATLLHSCSF
                     IVNTSLTLSTAALGIWLWHNGQVGVGAVATATAMALRVNGLSQYIMWESARLFENIGT
                     VNDGMATLSKPHTILDKPRALPLNVPQGAIKFEHIDFCYEAGKPLLNGFNLTIRPGEK
                     VGLIGRSGAGKSTIVNLLLRFYEPQSGTVSIDGQDISGVTQESLRAQIGLVTQDTSLL
                     HRSVRDNIIYGRPDATDAEMVSAAERAEAAGFIPDLSDAKGRRGYDAHVGERGVKLSG
                     GQRQRIAIARVMLKDAPILLLDEATSALDSEVEAAIQESLDKMMDGKTVIAIAHRLST
                     IAAMDRLVVLDKGRIIEEGTHAELLEKRGLYAKLWAHQSGGFLNEHVEWQHD"
     gene            complement(33306..33443)
                     /locus_tag="ACJJDE_000297"
     CDS             complement(33306..33443)
                     /locus_tag="ACJJDE_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540289.1"
                     /translation="MPSEGGAAFALTKPCVSASRCLPDGFSRKMALLSFLSDGIVFDA
                     V"
     gene            complement(33443..34027)
                     /gene="ruvA"
                     /locus_tag="ACJJDE_000298"
     CDS             complement(33443..34027)
                     /gene="ruvA"
                     /locus_tag="ACJJDE_000298"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HGG7540290.1"
                     /translation="MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGES
                     VQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGGIGAKTALGILSAMTADELARAV
                     AEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDGLFAAAPAADETEDIVSTLLA
                     LGYSEREAKAAVKGVPEGTDVGEGVRLALKNLLK"
     gene            complement(34109..34435)
                     /locus_tag="ACJJDE_000299"
     CDS             complement(34109..34435)
                     /locus_tag="ACJJDE_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7540291.1"
                     /translation="MNIKHLLLTSAATALLSISAPALAHHDGHGDDDHGHAAHQHNKQ
                     DKIISRAQAEKAALARVGGKITDIDLEHDNGRPHYDVEIVKNGQEYKVVVDARTGRVI
                     SSRRDD"
     gene            complement(34497..35216)
                     /locus_tag="ACJJDE_000300"
     CDS             complement(34497..35216)
                     /locus_tag="ACJJDE_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HGG7540292.1"
                     /translation="MTLTRKTLFLLTAAFGTHSLQTASADAVVKAEKLHASANRSYKV
                     AGKRYTPKNQVAEFTQTGNASWYGGRFHGRKTSGGERYDMNAFTAAHKTLPIPSYVRV
                     TNTKNGKSVIVRVNDRGPFHGNRIIDVSKAAAQKLGFVNQGTAHVKIEQIVPGQSAPV
                     AENKDIFIDLKSFGTEHEAQAYLNQAAQNFAVSSSGTNLSVEKRRYEYVVKMGPFASQ
                     ERAAEAEAQARGMVRAVLTAG"
     gene            complement(35213..35335)
                     /locus_tag="ACJJDE_000301"
     CDS             complement(35213..35335)
                     /locus_tag="ACJJDE_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7540293.1"
                     /translation="MPSENLSGHIPNRRPHCTAVRNVSGGHDAHSSSTQERNTF"
     gene            complement(35346..35810)
                     /gene="trmL"
                     /locus_tag="ACJJDE_000302"
     CDS             complement(35346..35810)
                     /gene="trmL"
                     /locus_tag="ACJJDE_000302"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HGG7540294.1"
                     /translation="MFTIVLYQPEIPPNTGNIIRLCANTGADLHLVKPLGFPLDSAKM
                     KRAGLDYHEFASLTVHENFDDCLKALAGRRIFALTTKGTARPDETAFQKGDVLLFGPE
                     TRGLPADILDSLPAAQKIRLPMQPGSRSMNLSNTVAVILFEAWRQHGYAGGV"
     gene            complement(35875..36600)
                     /locus_tag="ACJJDE_000303"
     CDS             complement(35875..36600)
                     /locus_tag="ACJJDE_000303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HGG7540295.1"
                     /translation="MDFLSRWRRIADAPTIRRCVLCHGSSGVSDGICAGCRDDLAAYR
                     TDAANSCPLCFRHIQGGAVCGGCQKKPPAFDRMWASLHYEPPVSNMIRTLKHLADLGM
                     VRPLANLMVQNPPDRLADECFDFVLPVPLSRERLLQRGFNQSESIVGLLAQRYGWQIL
                     PRHTVFRHHRPPQSTLKGSERRRNIKNAFEIRTPIPENCNILLIDDVFTTGATLDELA
                     KTLKKSGANRICCWTLARTPMKK"
     gene            36599..37342
                     /gene="bioH"
                     /locus_tag="ACJJDE_000304"
     CDS             36599..37342
                     /gene="bioH"
                     /locus_tag="ACJJDE_000304"
                     /EC_number="3.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052689 - carboxylic ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HGG7540296.1"
                     /translation="MPDAVKKVYLIHGWGANRHMFDDLMPRLPATWPVSAVDLPGHGD
                     APFAQPFDIEAAADAVAAQIDTPADILGWSLGGLVALYLAARHPDKVRSLCLTASFAR
                     LTADEDYPEGLAAPALGKMVGAFRSDYAKHIKQFLQLQLLHTPDADGIIGRILPDLAR
                     CGTPSALQEALDAAERADARHLLDKIDVPVLLVFGSKDAITPPRMGEYLHRRLKGSRL
                     VVMEKAAHAPFLSHAEAFAALYRDFVEGV"
     gene            37344..38132
                     /locus_tag="ACJJDE_000305"
     CDS             37344..38132
                     /locus_tag="ACJJDE_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HGG7540297.1"
                     /translation="MNPQDKCWQVHRHLAEHADQRLTLVRNAPKHILLAGADADISRS
                     LLAKRYPQAVFEEYDSRADFLAAAAAVRKGGFWQRFTGKGVVQHCQSPTAPLPEACAD
                     MLWSNLGLLAAEQILPVLHNWARALETDGLLFFTCFGRDTFTELKCRLKENGIESRSV
                     MFPDMHDLGDMLAENGFYDPVTDTAKLVLDYKKAETFWADMDTLGVWRAMSWNDENAA
                     RSCVGTIFEREGGLSITLETVYGHAVKKLMLPQGENVVQFFPKR"
BASE COUNT         8624 a         9840 c        10317 g         9462 t
ORIGIN      
        1 cctctttcag ttacagcagc ttgatccctt tcccttatcc aacgggggaa ggctaggata
       61 gggtggcttg caaatataca gaacaaggga caagagccac cctctctcca accctctccc
      121 tccgtacggg agggggtgga ttctcgcggg cgaagcccac gctacggtta gcctttaccc
      181 cagcacaaac aattcccgcc cgtgcgcctt cagccaactt ttagcattgt cggtatgcgg
      241 cgtcagcgtg ttcaccaaat gccaaaagcg cggactgtgg tcggggtggc ggaggtggca
      301 gagttcgtgg atgcagacat agtcggcgac gtattcgggc gtgccgatca gccgccagtt
      361 gaggcggatg ccggtgtgcg ggcggcatac gccccaaaag gttttggcgt tgctcaggtc
      421 tgtggcggtg ggcgtcagtc ctgtttcggc tgcgtgtttt tcaaggcggg gcagcaggta
      481 ttcgcgggcg cgttcgttca acaggcggcg caggtggtcg atttgtgcgg cggtttcttt
      541 tcggggaagc aggatttcag acgacgtgat acggatatgg ctttggctgt gggtatccag
      601 cttggtcttt attccccgat accaaatcca ctcgggtaag tttgggtggg aaacaggatg
      661 cacgggcgtt ttggcaagcg tgttccgcaa aatcgtttcg tttgccgcca gccagtttgc
      721 taacgcgtgg tcttgaaaaa agggtgggac gttgatgctg accgtctgca tattgacggg
      781 gcgcagaatc agatttttct tggcactgcg tttgagttcg atttcgatgc acaaaccgtc
      841 ggaaagagta taggtgaagc gtttcatagt tgtgaatggg tttcagaccg gatacatcgt
      901 ctgaaacagg aattttccat atcaggcggc aaacttcgga taatatacaa aatcaaacat
      961 ctgcgctaca aggttcagcc gaacaagccg ccgatatatt tgctgatggt gatggcgctg
     1021 agtactgcca tcaaaccgac cacaatcacg ccggaaacgg tgagccacag cgggtgtttg
     1081 tagtcgccga caattttggt tttgtaggcg gcaatcagaa tcagaccgag ggaaatcggt
     1141 aaaatcaggc cgtttaatgc gcctacgaac accagcacct gcgccggttt gccgatggtg
     1201 gaaaatacgg cggtggacac ggcgataaag gcaataatcc atttgttttt attgcgttcg
     1261 atagacgggc tgagaccgga gaagaacgac accgaagtat aagccgcacc aatcaccgaa
     1321 gtaatcgaag ccgcccaaat caccacgccg aaaatcagca ggccgatgta tcccgccgca
     1381 tattcaaacg gtgtggaagc agggttgtcg ggattgagct gtacgccttg gctgaccacg
     1441 cccaaaaccg ccaaaaacaa tacaatccgc ataatcgagg caatcaggat cgcccgcacc
     1501 gagctttggc tcacttccgg caacgccgat ttgcctttga tgcctgcgtc cagcagacgg
     1561 tgcgcaccgg cgaaggtgat gtagccgccg accgtgccgc ccaccagtgt aacaatcgcc
     1621 attgcatcga gtttttccgg cataaaggta tgcacggcgg catctgccag cggcggattc
     1681 gcctgccatg ccacataaac cgtcagcgca atcattacga aacccatcac ttgggcgaat
     1741 ttgtccatca ctttgcctgc ttctttaaac agaaacacac cgatggcaat cacgccgctg
     1801 atcacggcac cggtttccgg cgacagtccg gtcagcaggt tcagacccaa gcctgcgccg
     1861 ccgacgttgc caatattgaa cgccaaaccg cccatcacaa tcagcacagc caagaaatag
     1921 cctgcgccgg gcaagacctg attggcaata tcctgcgcct gtttttcgga aacggcgaca
     1981 atccgccaaa tattgagctg cgccccgatg tcgagcagaa tcgagagcag aatcacaaag
     2041 ccgaaacttg ccgccagtgc ttgggtgaag gtggcggttt gggtcagaaa gcccgggccg
     2101 atggcggaag tcgccatcag gaatgcagcg ccgattaagg catttctgcg gtttttttga
     2161 ttagacataa tcgcttatcc tctataaaat tggttgttgc tgtgtttggg cgaaacctgc
     2221 ggttttagct acgcagaaac tcgctttgct cgttttggcg aaacctgcgg ttttcagacg
     2281 gcctatgaac tgtttttcaa gcagaaactt tgatgcctgc cgccagtagt tcctgccgga
     2341 ttttttcggc aaacaccacg gcgtgcggcc cgtctccgtg cagacagatg ctgtcggctt
     2401 gcacggcaac caggctgccg tccactgctt tgacctgccc gtcccgcacc atctgcaata
     2461 cttgggcgat ggcttcttcg tcgctgtcca cctgcgcatc ggggcggctg cggggaacca
     2521 gcgtaccgtc gggcatatag cggcggtcgg cgaatacttc ggaaatcaca cccaagcctg
     2581 cggcttttcc ggcttccaag agcaggctgc cggaaagtgc catcaatttc aatttcgggt
     2641 cgaaatccgc cacaattcgg gcaacggtat ccgccagcgc acggtttttc gccgcttggt
     2701 tgtacattgc gccgtgcggt ttgacataag ccatttccaa accctgatca cggcacaagg
     2761 cctgcaatgc gcccaactgg taattcagac acgcccgcaa atcggcttcg gacagattca
     2821 tttcggtacg gccgaagttt tcccgatcgg gatagccggg gtgtgctccg atgcgcacgc
     2881 cgttttgttg ggcatacgcc aatgccgccc gaatatcggc aatgctgccg gcgtgttggg
     2941 cgcaggcgat gttggccgaa gtaatcagct gcaacaaggc ttcgtcgctg ccgcagcctt
     3001 cggcgagatc ggcgtttaaa tcaacctgct tcatgggtga ttctccgtat ttggttcaga
     3061 taggcttggt ttttgcgccg cagggcggtg gcttctttca agccgattat tttgaatttg
     3121 actttgctgc cgaagcgcac ctgtgccagc ctgcccaaat cggcggcggc aacggtagcg
     3181 attttcggat aaccgccggt ggtttgcgca tcggccagca ggataatcgg tttgccgccg
     3241 ggcggcacct gcacggttcc tgcctgaaca gcgtgggaca gcatttccaa aggttgcgac
     3301 agggtcagcg gctgtccgtc gaagcggtag cccatgcggt tgctatcgct ttgcagcgtc
     3361 cacgtttccc gttccagatt cagacgccct ttttcactga aagcggcata ttccgacgaa
     3421 ggaacaaggt ggacggtatc ggtaaacggt atcggggcaa tgccgacttt ggacaattcc
     3481 tgcgcacctt tgccgatggg gagataatcg cctttttgca gcattctgcc ctgatggccg
     3541 ccgaaaccgg ctttcaggtc ggtacttctc gaacccatca cttccggcac atcaaatccg
     3601 cccgccacgc acacatagcc gtacatgccc tgcacggcac gcaccatttt caaggtctgc
     3661 cctttgcggg cggtataacg ccaatacgaa tagaccggtt cgccgtccaa ttccgcctga
     3721 tacacggcac cggtgagaca aaacggcgta tcccgttcaa acaccagcat tatcccgccc
     3781 aaagcgattt cgattgcggc cgtgccttcg tcgttgccca ataaaatatt gcccgccgcc
     3841 aaagcaaccg tgtccatcgc accggcatga ccgatgccgt aacgccggtg tccgtagcgt
     3901 ccggtatcct gaatatgcgc cggtgcctgc actgccgaaa catgaatcat ggctcaatcc
     3961 tttctgcaac aaagcggact tggtcacccg ccgccagcag ggtcggcgga ttcaaatcgg
     4021 ctcggaacaa gggtaattcg gttctgccga taatctgcca gccgccgggc gaagcgaacg
     4081 gatacacacc ggtctgactg ccgccgatac cgaccgaacc ggcaggaacg gacgttctcg
     4141 gcacggcacg gcggggcgtg tgcaatgctt cgggcaagcc gcccagataa gggaaaccgg
     4201 gctggaagcc catcataaat acggtataag tttgcgccgt atggcggcgg acgatttcgg
     4261 aaataaccgt ctgatggaaa gcagcgactt ccgccaaatc cgggccgtat tcgccgccgt
     4321 agcagacggg aatttccacc agtttgccct gatggtctgt aacggcggtg tgttcccaca
     4381 catattgcaa ttcatcggca agcgtcgcca aatcggtatc gaaacgggta aacacggtca
     4441 gattgttcat gccgaccacc acttcctcaa tcctgtcgtg ctgcccgagc gcagcggcaa
     4501 acgcccacaa cttttgctgt ttgcccagtt cggaaggtgc attcagtcgg cagaccaaag
     4561 cggattcgct gattggtgtg atctctattc tcatttgttg ttcattttgg ttatgtttta
     4621 atgaatctat atgcaggggc ggcggtttgt caatatcttc tgtgctgcat catcaaaccg
     4681 tcgattggaa aagtgctgcc ctgccgctgc actttttcag acgaccttaa accgtttcta
     4741 ttaaaatagc gcattccact tttcagacgg catctctatg tttcccgacc aatccgcccc
     4801 caacctgctg caaggcttga atcccgaaca actttccgcc gtaacctggc cgccgcaatc
     4861 cgcccttgtg ctggcaggcg cgggcagcgg caaaacgcgc gtgctgacca cgcgtatcgc
     4921 atggcttttg caaaccggtc aggcaagcgt gcacagcatt atggcggtaa cgtttaccaa
     4981 caaagccgcc aaagaaatgc agacccgttt gggcgcgatg attcccgtcg acgtccgcgc
     5041 tatgtggctc ggcacgttcc acggcctctg ccaccgcttt ctacggctgc accaccgcga
     5101 tgccggtttg ccgtcttcct ttcaaatcct cgacggcggc gaccagcttt ccctcatcaa
     5161 acgcctgctc aaaagcctca acatcgccga agaaatcatc gcgccgcgtt cgctgcaagg
     5221 ctttatcaac gcgcaaaaag aatccggttt gcgcgcttcc gtcttgagtg cgcccgatcc
     5281 gcacacaagc cgcatgattg aatgctacgc cgaatacgac aaaatctgcc aacgcgaagg
     5341 cgtggtcgat tttgccgaac tcatgctccg cagctacgaa atgctgcaaa gcaacgaaat
     5401 cctgcgccag cattaccaaa accgcttcaa ccacattctg gtcgacgagt tccaagacac
     5461 caacaaactg caatacgcct ggctcaaact catggcgggc ggaaacgcag cggtatttgc
     5521 cgtcggcgac gacgaccaaa gcatttaccg tttccgtggc gcaaacgttg gcaatatgac
     5581 cgcgctgatg gaagaattcc acatcgacgc gcccgtcaaa ctcgaacaaa actaccgctc
     5641 cgtcggcaac atccttgccg ccgccaacgc tgttatcgaa aacaacgacg aacgcctcgg
     5701 caaaaacctg cgcaccgacg ccgaagcagg cgacaaaatt cgctactact ccgcctttac
     5761 cgacctcgaa gaagcccggt tcatcgtgga cgaaaccaaa gccctcgaac gcgaaggctg
     5821 ggatttggac gaaatcgccg tcctctaccg cagcaacgcc caatcgcgcg tcatcgaaca
     5881 aagcctgttc cgcagcggca tcccctacaa aatctacggc ggcttgcgct tttacgaacg
     5941 ccaagaaatc aaacacgcgc tcgcctacct acgcctcgcc gtcaatcccg acgacgacaa
     6001 cgccctcttg cgtgtcatca acttcccacc gcgcggcatc ggcgcacgca ccgtcgagaa
     6061 ccttcagacg gcctcaaacg aacaaggcat caccctctgg caagccgcct gcaacgccgg
     6121 cgcgaaagcc gccaaaatcg ccgccttcgt ccgcctgatt gaagcactgc gcaaccaagt
     6181 cggacaactg cccctgtccg aaatcatcgt cggcatcctc aaagacagcg gcctgaccga
     6241 acactaccga acccaaaaag gcgacaacca agaccgcctc gacaaccttg acgaactcgt
     6301 caacgccgcc atcgagttca aacccgaaga cagcaacttt gaaaccctgc ccgaaaacat
     6361 ttcagacgac cccgccttcc ccatcctcgc cttcctcagc aacgccgccc tcgaatccgg
     6421 cgaaaaccaa gcaggcgcag gtgaaaaagc cgtccaactc atgaccgtcc acgccgccaa
     6481 aggcttggaa ttcaacgccg tcttcctcac cggcatggaa gaaggccgct tccccagcga
     6541 aatgagcctt gccgaacgcg gcggcctcga agaagaacgc cgcctcatgt acgtcgccat
     6601 cacccgcgcc cgcaaacgcc tctacatcac catggcacag caacgcatgc tgcacggaca
     6661 aacccaattc ggcatcgtct cccgcttcgt cgaagaaatc ccacccgaag tattgcacta
     6721 cctgtccgtc aaaaagaccg cctacgacag ctacggcagc ccgcgccaaa ccgccgcatc
     6781 caaagacaaa atcatcgacg actacaaaca gccccaaacc tacgcaggct tccgtatcgg
     6841 acaaaacgtc cgccacgcca aattcggcac cggcgtgatt atcgatgccg cagataaagg
     6901 cgaatccgcc cgactgacca tcaacttcgg caaacagggc gtgaaagagt tggataccaa
     6961 gtttgcgaaa ttggaagcga tgtaaatttg aaatgcaggc tggatactcg tatccgacaa
     7021 aaatatttga cgcgtctatc gtttccgaaa aaccgctgtt ggaaaatgtc ggattcgaga
     7081 atccgaccta tggcaaaaaa ctgtagcaag gacaaggcaa aaggccgtct gaatccggta
     7141 acaacaaatt ttgccgaaac ctccgccgtc attcccgcgc aggcgggaat ccagaccttt
     7201 cggcacggga acttatcgga taaaaggttt ctttagattc cacgttctag attcccgcct
     7261 gcgcgggaat gacggacggt aaaagccggg tatagatacc taacccttgt ttatagctga
     7321 aaatcaataa ggaagaacat tatgtcccaa gtttttaaag attttgattt gtcctccgta
     7381 tgggaatccg acagttgggc agatgaaaac tacaaagaag ccccgtttac ccctgaaatt
     7441 ttggctgccg tagaaagtga actgggctat aaattgccgc aaagttttat tgaattgatg
     7501 gcggtacaaa acggcggaat atttgtcaaa aactgttttc cgaccacaca gagaaattcg
     7561 tgggcgaaag atcatgtgca aatttgcgag gtatcgggca tcggctttga aaaagaaggg
     7621 agtttgtgcg gcgaaacagg gcaaaaactt tggatggaag aatgggaata tccgcccatc
     7681 ggcgtgtatt ttgccaacga cccgtcaggc ggtcatgcca tgtttgcctt ggactatcgg
     7741 gcgtgtggaa aagacggcga gccgaaagtg gtgtttgtcg agcaagaatc ggattttgaa
     7801 atcgtcgaac ttgcccccga ttttgaaacc tttatccgca gcttgcggca tgaagatgag
     7861 tttattgacg aggaaatata aaacggcggt tgaaaaaccg gaatcatcaa gggaaaacgg
     7921 gcgaaataac ggataatcgc ttgaatccgt aaggaaaacg gtttggtgga acgcgccatc
     7981 caagaccttt gcaaagaaaa actgtctccg acagcattga cattattaac agaacttatc
     8041 aagtttggag ctatctcaaa tataattcgg ttatcctttt gtatccatta aatcatatgc
     8101 ttcaattaat tgttgttcta gctcttgtac caattttgaa ttgcgaattc ctgacacaat
     8161 ctcaaattct tctgcatcta tgcaaacacc tgcataaatt tcaataacaa gggaacgcaa
     8221 taattgaagc tcttctcttg ttaaagaaat aataatgtca tcacctgtgt aattgattat
     8281 attcataata attttatttt tgtttgtcaa agtaagtttt gcctaaggtt ggtctaaatg
     8341 cagttccacc atcttttgaa tttgggtctc tgattacaat tgctccagac ttatcatccc
     8401 aaattgctct tatgtgtttg gattgtaatc ttcgaattcc caagaaaaaa atcgtaataa
     8461 gtttgaaagt gtcaaatccc aagtttcttt tgagcaatat tctaatattt tatcaatttc
     8521 acttttaata atcttatgat caaactgttc taatattaat gcattagacc aaaaaaaacc
     8581 ttctttatta caatgatggg aaatccattt aggagaacaa atgcaaagtg aaaaaataga
     8641 tgagccttgt tctccttcga ttccgatatc caaatctatc catctatgga aattatctgg
     8701 aatttcgggg gtaaattttt caaaatcaat atcatataaa tttatgcttt ttaaatccaa
     8761 tttaatcatt agggctgtcc tagataaata gggaaattca aattaagtta gaattatccc
     8821 tatgagaaaa agtcgtctaa gccggtataa acaaaataaa ctcattgagc tatttgtcgc
     8881 aggtgtaact gcaagaacag caacagagcc tgacagcatt gtttatacgg attgttatcg
     8941 tagctatgat gtattagatg tgagcgaatt tagccatttc cgtatcaatc acagcacaca
     9001 ttttgctgaa cgacaaaacc atatcaatgg aattgagaat ttttggagcc aggcaaaacg
     9061 tcatttacgc aagtttaacg gcattcccaa agcgcatttt gagctgtatt taaaggagtg
     9121 cgaatggcgt tttaacaaca gtgagataaa agttcaaatt tccattttaa aacaattagt
     9181 aaaatcgagt ttatcttagt tgtccaggac agccccatta tttttataac accgtgaagc
     9241 cgcacagcag tttgaacagt gatacgccgt ttgcgggctt acgagtttat tttcccggcc
     9301 tgcagtttga gcaatacggt gatttcctac ggttaataca aatgtttaca cattgataca
     9361 tttcatttat agttccgcct atttgaaaat agaaaatatg aattcgaccg caagtaaaac
     9421 cctgaaagga ttgtcgctgg tgtttttcgc ctctggattc tgcgccctga tttaccaggt
     9481 cagctggcag aggcttctat tcagtcacat aggtatcgat ttgagttcga ttactgtcat
     9541 tatttctgta tttatggtcg gcttgggtgt aggtgcgtat ttcggtggac gcattgctga
     9601 ccgttttcct tcaagtatca tccccctgtt ttgcatcgct gaagtatcca tcggtctgtt
     9661 cggtttggta agcaggggtc tgatttccgg cttggggcat cttttagttg aggctgattt
     9721 gcccatcatc gctgctgcca atttcctctt attgctgctt cctaccttta tgatgggcgc
     9781 gaccttgccc ttgctgacct gtttttttaa ccggaaaata cataatgttg gcgagtctat
     9841 cggtacctta tattttttca acactttggg tgcggcactc ggatcgcttg ccgccgccga
     9901 atttttctac gtctttttta ccctctccca aaccattgcg ctgacagcct gctttaacct
     9961 tctgattgct gcttcagtat ggctgcgtta cagaaaggat ggatatagtg aacactaaac
    10021 cgaatactag tttgatttat atgctttctt tccttagcgg cttattgagc ttgggtatag
    10081 aagtcttgtg ggtgaggatg ttttcgttcg cagcacagtc cgtgcctcag gcattttcat
    10141 ttacccttgc ctgttttctg accggtatcg ccgtcggcgc gtattttggc aaacggattt
    10201 gccgcagccg ctttgttgat attcccttta tcgggcagtg cttcttgtgg gcgggtattg
    10261 ccgacttttt gattttgggt gctgcgtggt tgttgacggg tttttccggc ttcgtccacc
    10321 acgccggtat cttcattacc ctgtctgccg tcgtcagagg gttgattttc ccgctcgtac
    10381 accatgtggg tacggatggc aacaaatccg gacgacaggt ttccaatgtt tatttcgcca
    10441 acgttgccgg cagtgcattg ggtccggtcc ttatcggctt tgtgatactt gatttcttgt
    10501 ccacccaaca gatttacctg ctcatctgtt tgatttctgc tgctgtccct ttgttttgta
    10561 cactgttcca aaaaagtctc cgactgaatg cagtgtcggt agcagtttcc ctaatgttcg
    10621 gcatcctcat gttcctactg ccggattctg tctttcaaaa tattgctgac cgtccggata
    10681 ggctgattga aaacaaacac ggcattgttg cggtttacca tagagatggt gataaggttg
    10741 tttatggggc gaatgtatac gacggcgcat acaataccga tgtattcaat agtgtcaacg
    10801 gcatcgaacg tgcctatctg ctaccctccc tgaagtctgg catacgccgc attttcgtcg
    10861 ttggattgag tacaggttcg tgggcgcgcg tcttgtctgc cattccggaa atgcagtcga
    10921 tgattgttgc ggaaatcaat ccggcatacc gtagccttat cgcggacgag ccgcaaatcg
    10981 ccccgctttt gcaggacaaa cgtgttgaaa ttgtattgga tgacggtagg aaatggctgc
    11041 gtcgccatcc tgatgaaaaa ttcgacctga ttttgatgaa tacgacttgg tactggcgtg
    11101 cctattccac caacctgttg agtgcggaat ttttaaaaca ggtgcaaagc caccttaccc
    11161 cggatggtat tgtaatgttt aataccacgc acagcccgca tgcttttgct accgccgtac
    11221 acagtattcc ctatgcatac cgctatgggc atatggtagt cggctcggca accccggtag
    11281 ttttccctaa taaagaactg ctcaagcaac gtctctcccg gttgatttgg ccggaaagcg
    11341 gcaggcacgt atttgacagc agcaccgtgg atgctgcagc acaaaaggtt gtctctcgta
    11401 tgctgattca gatgacggaa ccttcggctg gggcggaagt tattaccgac gataatatga
    11461 ttgtagaata caaatacggc agagggattt aaccgtctta aagggtttca ggcaacgcag
    11521 gttttaggta acgtcctgct agttcaaaaa aaccgcatca cagcagtcgg gacaaaatgg
    11581 tttaaacatt ttgtcccgaa ttcttattcc tatatatagt ggattaacaa aaatcaggac
    11641 aaggcgacga agccgcagac agtacaaata gtacggaacc gattcacttg gtgcttcagc
    11701 accttagaga atcgttctct ttgagctaag gcgaggcaac gccgtactgg tttttgttaa
    11761 tccactatac cacgaattac ggtgtaaaaa tttatatgac cttataaaat caaataagaa
    11821 tcgttatcat aacatgattg tatttattgg ggtttttttg ggcgttttgc cgatatttac
    11881 cttttaatgg tttttgaaat tcgctaaaat acgaaattat tgtagaaatt ttgttaacgg
    11941 atttgggtgt aaccatgttg tccgcttact ttcccgtctt tgtctttatc ctcgtcggcc
    12001 tcgcggccgg cgtgctgttt atcctgctcg gcacgatttt aggcccgaaa cgccactacg
    12061 ccgaaaaaga cgcgccttac gaatgcggtt ttgaagcctt tgaaaacgca aggatgaagt
    12121 tcgacgtgcg ctattacctc gtcgccatcc tcttcatcct gtttgatttg gaggtcgcgt
    12181 tcatgttgcc gtgggcagtt gtgttcaaag atttgggcgc gtacggcttc tggtctatgc
    12241 tggtgtttat cgtcgtcctg acggtaggct ttgtttacga atggaaaaaa ggtgcgctgg
    12301 aatgggaata gaaggcgttt tgaaaaaagg tttcatcacc accagcgcgg atacggtgct
    12361 gaactatatg cgtaccggtt cattgtggcc ggttactttc ggcttggcct gctgcgccgt
    12421 ggaaatgatg catgcaggta tggcgcgtta tgaccttgac cgtttcggca tcattttccg
    12481 tccgtcccca cgtcaggccg acctgatgat tgtggcaggt acgctgacca acaaaatggc
    12541 gcccgccctg cgccgcgtgt acgaccagct tgccgagccg cgctgggtgt tgtctatggg
    12601 ttcgtgtgca aacggcggcg gctattatca ctattcttat tccgtcgtgc gcggtgccga
    12661 tcgcgtcgtg ccggtagacg tttatgtgcc gggttgtccg ccgactgcgg aagccctgat
    12721 ttacggcctg attcagctcc aacaaaaaat caagcgcact tccaccatcg cgcgtgacga
    12781 gtaaggagag gacgatatgg caagcattca aaacttatac gagaccgtcg tcggcgtgct
    12841 tggcgatcag gcaagcaaag tcatttcagc tttgggcgag attaccgtcg agtgtctgcc
    12901 tgaacactat gtttcagtga tgactacgct gcgcgaccat gaagaactgc atttcgagct
    12961 tctggtcgat ttgtgcggtg tcgattacag cacttacaaa aacgaagtat ggcagggcaa
    13021 acgctttgcc gtcgtcagtc agttgctttc cgttaaaaac aatcaacgca tccgcgtacg
    13081 cgtctgggtt tcagacgacg acttccctgt agtcgaatcc gtagtcgata tttacaacag
    13141 cgcggattgg tacgaacgcg aagccttcga tatgtacggc atcatgttca acaaccaccc
    13201 ggacctacgc cgcatcctga ccgattacgg tttcgtcgga catccgttcc gcaaagactt
    13261 cccgatttcc ggctatgtgg aaatgcgtta cgacgaagag caaaaacgcg tgatttacca
    13321 acctgttacc atcgagccgc gcgagatcac gccgcgtatc gtccgtgagg agaactacgg
    13381 tggccaataa attaagaaac tacaccatca acttcggccc gcaacaccct gcggcgcacg
    13441 gcgtattgcg tatgattttg gagctggacg gcgaacaaat cgtccgtgcc gacccgcata
    13501 tcggcctcct gcaccgaggt actgaaaaac tggctgaaac caaaacctat ctgcaagccc
    13561 tgccctatat ggatcgcttg gactatgttt ccatgatggt caacgagcag gcgtattgct
    13621 tggcagtaga aaaacttgcc ggtatcgatg tacctatccg cgcccaatat atccgcgtga
    13681 tgttcgccga agtaacgcgc atcctcaatc atttgatggg catcggttcg cacgcattcg
    13741 acattggtgc gatgaccgcc atcctttatg ccttccgcga ccgcgaagag ttgatggact
    13801 tgtacgaagc cgtgtccggc gcacgtatgc acgcagccta cttccgtccc ggcggcgttt
    13861 accgcgacct gcccgacttc atgcccaaat acgagggcag caaattccgc aatgccaaag
    13921 tattgaagca gctcaacgaa tcccgcgaag gcacgatgct cgactttatc gatgccttct
    13981 gcgaacgttt cccgaaaaac atcgacacac tcgaaaccct cctgaccgac aaccgtattt
    14041 ggaaacagcg taccgtcggc atcggcgtcg tctcccccga acgtgccatg caaaaaggct
    14101 ttaccggcgt gatgttgcgc ggttcgggcg tggaatggga cgtgcgtaag acacagcctt
    14161 acgaagtgta cgacaaaatg gatttcgaca tccctgtcgg cgtgaacggc gactgctacg
    14221 accgctacct ctgccgtatg gaagaaatgc gtcaatccgt acgcatcatc aaacaatgtt
    14281 ccgagtggtt gcgtgtcaat ccgggtccgg tcattaccac aaaccacaaa tttgctccgc
    14341 ccaaacgtac cgaaatgaaa acaggtatgg aagacctgat tcaccatttc aaactcttta
    14401 ccgagggtat gcacgttccc gagggcgaga cctacaccgc tgtcgaacat ccgaaaggcg
    14461 agttcggcgt ttacatcatt tcagacggcg caaacaaacc ctaccgcctg aaaatccgcg
    14521 cacccggctt cgcccatctg caaggcatgg acgaaatggc aaaaggccac atgctcgccg
    14581 acgtcgttgc catcatcggt acgcaggaca tcgtattcgg ggaggttgac cgataatgtt
    14641 atccgcagaa tccttaaaac aaattgatat tgagttggca aaatatcctg ccgaccaacg
    14701 ccgctctgcc attatgggcg cattgcgtat tgcacaaacc gaaaaaggct ggctcgcccc
    14761 cgaaaccatc gcctttgttg cagactatat cggcatctcg cctgcacaag cctacgaagt
    14821 cgctaccttc tacaatatgt acgaccttga gcctgtcggc aaatacaaac tgaccgtttg
    14881 taccaacctg ccctgcgccc tgcgcggcgg tatggcaacc ggcgaatacc tcaaacaaaa
    14941 actcggtatc agctacggcg aaaccacgcc tgacggcaaa tttacccttg tcgaaggcga
    15001 atgcatgggg gcgtgcggcg atgctcctgt tatgttgttg aataatcata aaatgtgcag
    15061 ctttatgact gaagaggcga ttgagaagaa actggcggag ttggagtagg tcgtctgaaa
    15121 cgacgattta aacgtaggtc ggatacttgt atccgacaga gtgggtaaaa aggcaaaatg
    15181 tcggatttaa gaatccgccc tactgaaata ccgaaatgcc gtcattcccg cgcaggcggg
    15241 aatccaccgg taagattcgg tttctgaatt taataagaca ttgcttacca ttgaggatgg
    15301 attcccgcct gcgcgggaat gacggcagac aagcaagtgg tcgagatcca acaaaaacga
    15361 ttaaaggtcg tctgaaaata tcgatttgat aaactagatt ttatttcaga cgacgttaca
    15421 agccggtaca caaagacatc ttaaggtcgt ctgaaacagc ggccgcaacc gatacgaaaa
    15481 caaacaggca caccaaaaat ggctatttac caatcaggcg tgatttttga ccaagtggat
    15541 accgccaatc ccgattgctg gacattggac gaatacgtca aacgtggcgg ttataccgcc
    15601 ctgcgtaaaa tcctgtccga aaacatctcg caaaccgatg tgattgacga agtcaaaacc
    15661 tccggcttgc gcggtcgtgg cggtgcgggc ttcccgaccg gtttgaaatg gagctttatg
    15721 ccccgttctt tccccggcga aaagtacgtc gtttgcaaca ccgacgaagg cgagccgggt
    15781 acatttaaag accgcgacat tattatgttc aacccccatg ccctgattga aggcatgatt
    15841 atcgccggtt acgcgatggg cgcgaaagcc ggttacaact atatccacgg cgaaattttt
    15901 gaaggctacc aacgctttga ggccgctttg gagcaggcgc gtgccgcagg ctttttgggt
    15961 aaaaatattt tgggttcgga ttttgaattc gaactcttcg cccaccacgg ctacggtgca
    16021 tacatctgcg gcgaagaaac cgcattgctt gaatcgctgg aaggcaaaaa aggccagccg
    16081 cgctttaaac cgccattccc tgcttcgttc ggcctgtacg gcaaaccgac taccatcaac
    16141 aataccgaaa ctttctcctc cgtttcattc attatccgtg acggcggaca ggcatttgcc
    16201 gataaaggta ttccgaatgc aggcggtacc aaattattct gtatttccgg ccatgtcgag
    16261 cgtccgggca actatgaagt gccattgggc acaccgtttg ccgaagtctt gaaaatggca
    16321 ggcggtatgc gcggcggcaa aaaactcaaa gccgtcattc ccggcggttc gtccgcgccc
    16381 gtattgcctg ccgacatcat gatgcagaca aatatggact acgactcgat ttccaaagca
    16441 ggctcgatgc tgggttctgg cgcgattatc gtcatggacg aagacgtgtg catggtgaaa
    16501 gcccttgagc gcctgagcta cttctactac gacgagtctt gcggccaatg tacgccttgc
    16561 cgagaaggca ccggctggct ttaccgcatc gtccaccgca tcgtagaagg caaaggtaaa
    16621 atggaagatt tggatttgct ggattctgtc ggcaaccaaa tggcaggccg caccatctgc
    16681 gcccttgccg atgccgccgt cttccccgtc cgaagcttta ccaagcattt ccgtgatgag
    16741 tttgtgcatt acatcgaaca cggcggaccg atgaaagagc ataagtgggg agggtggtaa
    16801 tggtggaagc taaaattttt attctatacg gtgcagccaa caaaggtaag agtacgacac
    16861 tcaatacgct ttttaatcag atttgtcgga aattttctaa atttctagtc ttttttgaaa
    16921 gacatggaaa cggcttagat tttgttgcag tatttgatca tgaaggtcag aggattggtt
    16981 tttattcatc tggtgataat gaatacgagg ttaggagaaa tttatacaaa ctttattcgc
    17041 ataattgtga ttttattttt ggcacgtcaa ggacacgggg tggtagttgc gatgcagtag
    17101 gatgttatgc agagttattg catggcgatg taaatataat taattggtgt gaaaagtttg
    17161 agcctacaga tgaagacaat gagcgtgctg ttaaagagtt atttaagtca tttaaaaata
    17221 taataaataa gttatagttt tagttggttt tatattggtt aaaagcaaaa tgctaaaaat
    17281 ttaactttgc cgtcattccc gcgtaggcgg gaatccatag tggaatttac agaacccgat
    17341 atttgaaaag cagttaccga aaacccaaga atggattccc gcctacgcgg gaatgacggc
    17401 aaggtggcag taaacgtttt aaacagtatt gattgtcaat gaaactcaaa aggccgtctg
    17461 aaacccattt ttcagacgat ctccataaaa aattatttat caaatacccg taactaggaa
    17521 cgaaccatgt tacaaatcga aatcgacggc aaacaagtat ctgtggagca gggcgcgacg
    17581 gtgattgaag ccgcgcacaa gctcggtact tatattccgc atttctgtta ccacaaaaaa
    17641 ctttccatcg ccgccaactg ccgtatgtgt ctggtgaacg tagaaaaagc cccaaaaccc
    17701 ctgcctgcct gtgccacgcc ggttacagac ggcatgattg tgcgtacgca ttcggcaaaa
    17761 gcccgagagg cgcaggaagg cgtgatggag ttcctgctca tcaaccatcc gcttgattgt
    17821 ccgacctgcg accaaggcgg ggaatgccag ttgcaggatt tggcggtggg ctacggaaaa
    17881 accaccagcc gctacaccga agaaaaacgt tccgtcgtcg gcaaagacat ggggcctttg
    17941 gtttccgccg aggaaatgag ccgctgtatc cactgcaccc gctgcgttcg tttcactgaa
    18001 gaaatcgccg gtttgcaaga aattgcgatg gtgaatcgcg gcgaacactc cgaaatcatg
    18061 ccctttatcg gcaaaacggt ggaaaccgag ctgtcgggca acgtcatcga tttgtgtcct
    18121 gtcggcgcat tgaccagcaa accgttccgc ttcaacgcgc gtacttggga attgaaccgc
    18181 cgcaaatccg tttccgccca tgacgctttg ggcagtaacc tgattgtaca aaccaaagac
    18241 cataccgtcc gccgcgtact gccgctggaa aacgaagcga ttaacgaatg ctggttgtcc
    18301 gaccgcgacc gttttgccta cgaaggcctg tatcacgaaa gccgtctgaa aaacccgaaa
    18361 atcaaacagg gcggcgagtg gatggacgtg gattggaaaa ccgcattgga atatgtccgc
    18421 agcgcgattg aatgtatcgc caaagacggc aaccaaaacc aagtcggcat ttgggcgaac
    18481 ccgatgaata cggttgaaga gctgtatctg gccaaaaaac ttgccgacgg cttgggtgtt
    18541 aaaaactttg caacccgttt gcgtcaacaa gacaaacgtc tttcagacgg cattaagggt
    18601 gcgcaatggt tgggacaaag cattgaatct ttggctgaca acgatgccgt attggtagtc
    18661 ggcgcgaact tgcgcaaaga acagccgctc ctgaccgccc gcctgcgccg cgccgccaaa
    18721 gaccgtatgg ccttgagcgt attggccggc agcaaggaag aattgtttat gccgcttctg
    18781 tttcaagaag ccgcacatcc cgacgagtgg gcaggccgtc tgaaaaacct gtctgccaat
    18841 gcggaacacg ccgttaccgc cagcctgaaa aacgctgaaa aagcagcggt gattttgggc
    18901 gcggaagtgc aaaaccatcc tgattacgcc gccatttatg ccgccgcgca agagctggca
    18961 gacgcgaccg gcgcagtgct gggtattttg ccgcaagtcg ccaacagcgt cggtgcggat
    19021 gtcttgggcg taaactccgg cgagagcgtt gccgaaatgg caaacgcgcc gaaacaggca
    19081 gtcttgctgc tcaacgtcga gccggaaatc gatatggttg acggtgcaaa agccgtggcc
    19141 gcgttgaaac aggcgaaaag cgtgatggcg tttacaccgt ttgtcagcga aacgctgctg
    19201 gacgtgtgcg acgtattgct gccgattgcg ccgtttaccg aaacatcggg cagcttcatc
    19261 aatatggaag gccgtctgca atcctttcac ggcgtggtac aaggcttcgg cgattcgcgt
    19321 ccgatgtgga aagtgttgcg tgtattgggc aacctgtttg acctgcaagg ttttgaatac
    19381 cacgataccg ctgcgattct gaaagatgcg ttggatgcgg aaagcctgcc gtccaaactg
    19441 gacaaccgca gcacatggac aggggagggc gttcagacgg catcagaccg cctcgtccgt
    19501 gtcggcggcg tcggtattta tcacactgat tctatcgtgc gccgttccgc accgttgcag
    19561 gcaaccgtcc atgccgccgt gcctgccgcg cgtgtgaatc cgaacacttt gggacgcttg
    19621 ggcctgcaag acggacaaac cgctgtcgcc aaacaaaacg gcgcaagcgt atcggttgct
    19681 gtcaaagccg atgccggttt gcctgaaaac gtggtgcatc tgccgctgca taccgaaaat
    19741 gccgcgctgg gtgcgttgat ggacactatt gaactggcgg gagcttgatc atgcaagaat
    19801 ggttccaaaa cctctttgcc gcaacgctcg gtctgggcga tttgggcatc accgtaggct
    19861 tggtggtatc cgtcatcgtc aaaatcgtga ttatcctgat tccgctgatt ctgaccgttg
    19921 cctacctgac gtatttcgaa cgtaaagtca tcggcttcat gcagcttcgc gtcggtccga
    19981 acgtaaccgg cccgtggggt ctgattcagc cgtttgccga cgtgttcaaa ctcttgttta
    20041 aagaggtaac ccgtccgaag ctgtcaaaca aagccctgtt ctacatcggc ccgattatgt
    20101 cgcttgctcc gtctttcgca gcatgggcag tgattccgtt caacgaagaa tgggtgctga
    20161 ccaacatcaa tatcggcctt ttgtacatcc tgatgattac ctcgctgtcg gtttacggcg
    20221 tgatcatcgc gggctgggct tccaactcca aatattcgtt cttgggtgca atgcgtgctt
    20281 ccgcacaaag catttcctac gagattgcca tgagtgccgc gctggtgtgc gttgtgatgg
    20341 tatcgggcag catgaacttc tccgacatcg ttgccgcaca agccaaaggc atcgcgggcg
    20401 gttccgtgtt ctcgtggaac tggctgccgc tcttccccat cttcatcgtt tatctgattt
    20461 ccgccgttgc cgaaaccaac cgcgcaccgt ttgacgtggc agagggcgag tccgaaatcg
    20521 ttgccggaca ccacgttgaa tattccggct tcgcattcgc gctgttcttc cttgccgaat
    20581 acattttcat gattctgatt gccgcgctga catcgctgat gtttctcggc ggctggttgt
    20641 ctccgttccc gcaaagctgg ggctttatcg gtacgccttc cgcattctgg atgtttgtga
    20701 aaatggcggc agtgttgtac tggtatctgt ggatccgtgc aaccttcccg cgctaccgtt
    20761 acgaccaaat catgcgtttg ggctggaaag tgctgattcc gatcggcttc gcctacatcg
    20821 tgattttggg cgtgtggatg atttcaccgc tgaatttgtg gaaataagtt tcagacggca
    20881 tcttgaggcc gtctgaacaa agcgattttg aatacctaac gaaatccctg ttttgaggga
    20941 acataatatg gctaacttag taaaaacctt tctgctcggc gagttggtaa aaggcatggg
    21001 cgtaacgctc aaaaactttt ttgcccgcaa agacacaatt tattttcccg aagagaaaac
    21061 gccgcaatcc gtgcgtttcc gcggtctgca cgcgcaacgc cgttatccga acggcgagga
    21121 acgctgcatc gcgtgtaaat tgtgtgaagc cgtttgcccc gcaatggcga tcaacatcga
    21181 atcggaagaa cgcgaagacg gcacgcgccg caccaagcgt tacgacatcg acctgaccaa
    21241 gtgcatcttc tgcggtttct gcgaagaagc ctgcccgacc gatgcgattg tggaaaccca
    21301 tatttttgaa taccacggcg agaaaaaagg cgacttgcac atgaccaagc cgattctttt
    21361 ggccattggc gacaaatacg aagctgaaat cgccaaacgc aaagccgctg acgcgccgta
    21421 tcgttaagga gcagacgaat gactttttcc gcgattctgt tctatattct tgccgccatc
    21481 gttttgtacg gtgcggttcg taccgttacc gccaaaaacc ctgtccacgc cgctttgcat
    21541 ctggtgctga ccttctgcgt gagcgcgatg ctttggatgc tgatgcaggc cgagtttttg
    21601 ggcgtgacgc tggtggtggt ttacgtcggc gccgtgatgg tgttgttcct gttcgttgtg
    21661 atgatgttga acatcgacat tgaagaaatg cgcgccggtt tctggcgtca tgcgccggtt
    21721 gccggtgtgg tcggcacatt gttggcggtt gccctgatcc tgattctggt caacccgaaa
    21781 accgacctgg ccgcatttgg tctgatgaaa gacattccgg ccgattacaa caatatccgc
    21841 gatttgggca gccgtattta taccgactac ctgttgccgt ttgaattggc ggcggtattg
    21901 ctgctgttgg gtatggtggc ggcgattgcg ctggtttacc gtaaaaccac caatccgaaa
    21961 cgcatggatc ctgccgacca agttaaagta cgcgccgatc aaggccgtat gcgtctggtg
    22021 aaaatggaag cggtcaaacc gcaagtcgaa tctgccgaag agagcgaagt ttcagacggc
    22081 ctcaagccgg aaggggaggg caaagcatga ttaccttgac gcattatctg gtattgggtg
    22141 cgctcctgtt cggtatcagc gcaatgggta tctttatgaa ccgcaaaaac gtgctggtat
    22201 tgctgatgtc catcgagctg atgctcttgg cggtgaactt caactttatc gccttctcgc
    22261 aacatttggg cgatactgcc ggacaaattt tcgtattctt cgtattgacc gttgccgctg
    22321 ccgaatctgc catcggtttg gcgattatgg tattggtgta ccgcaaccga caaacgatta
    22381 atgttgccga tttggacgag ttgaaagggt aaaggtaggt tgggtcgaga cctgacaaga
    22441 caccgatgcc gtctgaaaac ccgataggaa aaacgatgaa atccatagac gaacaaagcc
    22501 tgcataatgc ccgccgcctg tttgaaagcg gcgacatcga ccgtatcgaa gtcggtacca
    22561 ccgcgggcct gcaacagatt caccgttacc tgttcggcgg cttatatgat tttgcgggtc
    22621 aaatcaggga agacaacatt tccaaaggcg gttttcgttt tgccaacgcc atgtatttaa
    22681 aagaggcttt ggttaaaatc gagcagatgc ccgagcggac ttttgaagaa atcatcgcca
    22741 aatatgttga aatgaacatt gcccatccgt ttttggaggg taatggcaga agtacccgca
    22801 tctggctgga tttggtgctg aagaaaaacc tgaaaaaaat cgtaaactgg caaaatgtaa
    22861 gcaaaaccct gtatttgcag gcgatggaac gcagccccgt caacgattta gaactgcgct
    22921 ttctgttaaa ggacaacctg accgacgatg tggacaaccg tgaaatcatc tttaaaggta
    22981 tcgagcagtc gtattattac gaagggtatg aaaaaggctg agggtcgtct gaaaagcgat
    23041 ttcagactgt ttcagacgac ctgattcggt aggtgatcag acgggagcgg atgagaaaag
    23101 aaattctggg taagaataat ccggtctgaa atattggaag aagaatgatg gataaaaatc
    23161 agttagaaca agaatttcat aaagccatgt taaatattta tcaggaggct ttgaatttgc
    23221 cgcaacctta caaggcgaca cgatttttac aaattgtaaa tgaatttggt ggtaaagagg
    23281 cggcggataa attattaagt acgggggaaa agaagactca gaccggtttt acagagctga
    23341 ttctgagtgg tggcggagtc cacgccttga aatacagtat ggaatatctg gtgttacaaa
    23401 agccgtggtg tgatttattt actgaagagc aattagctgt ggcacgcaaa cgattggagc
    23461 gtgttggatt tgtttttccg aagtaatttt gtacgaaaca aacatagatt tttaaatcaa
    23521 tcggattcaa tcaaatgaac gacatgactt tatatttgat aattgccctt gttccgttgg
    23581 caggctcgtt gattgcgggt ttgttcggca acaaaatcgg tcgtgccggt gcgcatactg
    23641 ttacgatact cggtgtggcg gtgtctgccg tgctgtcggc ttatgtgctg tggggattcc
    23701 tcaatggcag ccgtgccaag tttgatgaga acgtctatac ctggctgacg atgggcggtt
    23761 tggatttctc cgtcggcttc ttggtcgata cgatgacggc gatgatgatg gtcgtggtaa
    23821 cgggcgtatc gttgatggtg catatctaca ccatcggcta tatgcacgat gaaaaagtcg
    23881 gctaccaacg cttcttcagc tatatttctt tgtttacttt cagcatgttg atgctgatta
    23941 tgagcaacaa cttcatccag ctcttcttcg gctgggaggc tgtgggcttg gtgtcgtatc
    24001 tcttgatcgg tttctatttc aaacgtccaa gcgcaacatt tgccaacctg aaagcctttt
    24061 tgatcaaccg tgtcggcgac ttcggctttt tgctcggtat cggcttggtg cttgcctatt
    24121 tcggcggcag cctgcgctat caagatgtat tcgcttatct gcccaacgtg caaaatgcca
    24181 ccatccagct tttccccggt gtggaatggt cgttgattac tgtcacctgt ttgctcctgt
    24241 ttgtcggtgc gatgggtaaa tcggcacaat tcccactgca cgtttggctg cctgattcga
    24301 tggaaggccc gaccccgatt tctgcattga ttcacgctgc gacgatggtt accgccggtc
    24361 tgtttatggt atcgcgtatg tcgccgattt atgagatgag cagcactgcg ctgtctgtca
    24421 ttatggtgat cggtgcgatt accgccctgt ttatgggttt cttgggcgtg attcaaaacg
    24481 acatcaaacg tgtggttgcg tattccacct tgtcgcaact gggctatatg accgtggctt
    24541 tgggtgcgtc tgcctattcc gtggcgatgt tccatgtgat gacccacgct ttctttaaag
    24601 ccttgttgtt cttggcggca ggcagcgcga ttatcggtat gcaccacgac caagacatgc
    24661 gccacatggg caacctgaaa aaatacatgc cgattacttg gctgaccatg ctgatcggta
    24721 acttgtcgct gatcggtacg ccgttcttct ccggcttcta ttctaaagat tcgattatcg
    24781 aagcggcgaa atacagcacc ctgccgggca gcggctttgc ctattttgcc gtccttgcca
    24841 gcgtgttcgt taccgcgttc tacgcgttcc gccaatactt tatggtgttc cacggcgaag
    24901 agaaatggcg cagcttgcct gaacatcatg acgatcatca tggcgatcat catggcgaag
    24961 aacatcacag cttgggcaaa aacgacaatc cgcacgaaag cccgttggtt gttaccctgc
    25021 ctttgatttt gcttgccatt ccgtccgtca tcatcggcta cgttgccatc gagcctatgc
    25081 tttacggcga tttcttcaaa gatgtgattt tcgtcaacgc cgacgcgcat ccgaccatgc
    25141 acatcatgaa ggaagagttc cacggcgcat tggcaatggt gtcgcacagc ctgcattcgc
    25201 ctgtactcta ccttgctatc gcaggcgtgt tgagcgcatg gcttttgtac gtcaaactgc
    25261 cgcacctgcc agcgaaaatt gcacagacgt tccgtccgat ttacgttttg tttgaaaaca
    25321 aatactacct cgacgccctg tatttcaacg ttttcgccaa aggcacacgc gcattgggta
    25381 ctttcttctg gaaagtcggc gataccgcca ttatcgacaa cggcatcgtc aacggctctg
    25441 ccaaactggt cggcgcgatt gccgcgcaag tgcgtaaagc tcaaaccggc tttatctata
    25501 cctacgccgc cgctatggtg ttcggcgtat tggtcttgct cggtatgacc ttctggggat
    25561 tgttcagata aggatgaggt ttcagacggt ctcttaaaac gtcgtctgac aaaccaaccc
    25621 gtacaacgat atttttattt taaccacagg ttaaccacta tgttttccaa ctacctactc
    25681 agcttggcaa tatggatacc catcgccgca ggtgtgctgg ttttgtcgac cggtaaggac
    25741 agccgtgcgc cgctggcgcg tgtgcttgcc tttatgggtg cgcttgccgg tttcttggta
    25801 acgctgcccc tgtttaccgg tttcgaccgt ttgagcggcg gctatcaatt taccgagttc
    25861 cacgagtgga ttccgcttct gaaaatcaac tacgcattgg gcgtggacgg tatttcagtg
    25921 ctctttatca tcttgaatgc gtttattacg ctgctggtgg tattggccgg ttgggaagtt
    25981 attcagaaac gcccggcgca gtatatggcg gcattcctga tgatgtcggg tttgattaac
    26041 ggtgcgtttg ccgcgcagga tgcgattctg ttttatgtgt tcttcgaggg tatgctgatt
    26101 ccgctgtacc tgattatcgg tgtatggggc ggcccgcgcc gcgtctatgc gtcggtcaag
    26161 ctgttcctct atacgctgat gggttcgctc ctgatgctgg ttgctatggt ttacctgtac
    26221 tatcaaacag gcagcttctc tattgtcgat ttccaaaaca tcaaacagat tccgttgggc
    26281 gtacaacagc ttttatttgc agcgttcttc ctgtcatttg ccgtaaaagt gccgatgttc
    26341 cctgtgcaca cttggttgcc ggatgcccac gttgaagcgc cgaccggcgg ttcgatggtg
    26401 ttggcggcga ttacgctgaa gctgggtgcg tatggtttct tgcgctttat cctgccgatt
    26461 atgccggatg cggcacgcta ttttgcccct gtgatcattg tattgagcct gattgccgtg
    26521 atttacatcg gtatggtggc tttggtgcaa accgatatga aaaaactggt ggcgtattcg
    26581 tccatcagcc atatgggttt tgtcactttg ggtatgttcc tgtttgtgaa cggccaattg
    26641 aatgattggg cattgaaagg cgcaatcatt caaatgattt cccacggttt tgtgtctgcc
    26701 gcgatgttta tgtgtatcgg cgtgatgtac gaccgcctgc atacccgcaa tattgccgat
    26761 tatggcggcg tggtcaatgt gatgcctaag tttgcggcgt ttatgatgtt gttcggtatg
    26821 gccaatgccg gtctgccggc gacttctggc ttcgtgggcg agtttatggt gattatgggc
    26881 gcggttaaag tgaatttctg ggtgggcgcg ttggcggcta tgacgctgat ttacggtgcg
    26941 tcttataccc tgtggatgta caagcgcgtg attttcggcg cgattcacaa tccgcacgtt
    27001 gccgaaatga aagacatcaa ctgtcgcgag tttacgattc tggcggtttt ggcggttgcg
    27061 gtattgggta tgggcctgta tccgaacgca tttatcgaag tggtgcatca ggcggcaaac
    27121 gatttgattg cccatgtggc acaaagcaag atttgaggtg tgtaaatgaa ctggtctgat
    27181 ttgaatttaa tgcccgccat gcccgaaatc gtgctgcttg cgctgctggt gttattgttg
    27241 ctggcggact tgtgggtcag tgatgacaaa cgccggtgga cgcattacgg cgcgttggca
    27301 acggtggcgg ttacggctgt ggtgcagttg gcggtgtggg aacagggcag cacgtcttcg
    27361 ttcaacggga tgtatattgc agacggtatg tcgcgtttgg caaaaatggt tttatatgcc
    27421 ttgatgttta ccctgtttgt ctatgccaag ccctacaacc aagtgcgcgg tattttcaaa
    27481 ggcgagtttt acaccctgtc gctgtttgcc ctcttgggta tgggcgtgat ggtgagcgcg
    27541 gggcattttt taactgccta tatcggtttg gaactcttgt cgcttgccct ttacgccctg
    27601 attgccctgc gccgcgattc cggctttgcc gccgaagccg ccttgaaata ttttgttctg
    27661 ggtgcgctgg catccggcct gctgctctac ggtatttcta tggtttacgg cgcaaccggt
    27721 tcgctggaat ttgccggcgt gctcgcctct tccttcaatg aagaagcaaa cgaatggctg
    27781 ttgaaactgg gtctggtgtt tatcgtcgtc gccgttgcgt tcaaactcgg cgcggtgccg
    27841 ttccatatgt gggtgcccga cgtgtatcac ggcgcgccca cttctgttac cgccctggtc
    27901 ggcactgccc cgaaaatcgc cgccgttgtt ttcgctttcc gcatcctcgt taccgggttg
    27961 ggaaccgtgc atcatgactg gtctctgatg tttgccctgc ttgccgccgc ctcgctgctg
    28021 gtcggcaacc ttgccgccat catgcagacc aatatcaaac gtatgctcgc ctattccacc
    28081 gtatcgcata tggggtttat cctgctggcg tttatggcgg gcgcggtcgg ctttgcggcg
    28141 agtctctatt acgccattac ctacgcgctg atggcggcgg cagggttcgg tgtgttgatg
    28201 gtgttgtcgg acggggacaa cgagtgcgaa aacatcagcg atttggcagg gttgaaccaa
    28261 caccgcgtat ggcttgcctt tttgatgctg ctggttatgt tctctatggc gggcattccg
    28321 ccgctgatgg gcttttacgc caaattcggc gtgattatgg cactcttaaa acaaggctat
    28381 gtttggttgt ccgtatttgc cgtcgtgatg tcgctgattg gcgcgttcta ctacctgcgc
    28441 gtggtcaaag tcatgtattt tgacgaatcc ggccgcgccc gtcccgccgc cggcggcaac
    28501 aatgccgcaa aattcctctt aagcatcaac gcgctgctgt tggtgctgtg gggcattatg
    28561 ccgcaaaccg ttatcgactg gtgcgccaag gcgttggaga acacgctgta agccgccgca
    28621 acggcagccg tgtcagaggc tgccgttttt gttaagatat gccgttccgc aatgcagttc
    28681 agacggcatc gccgccgaca atgcccaaac agaaagccca ccatgaccgc atccatgtac
    28741 atccttttgg tcttggcact catctttgcc aacgccccct tcctcaccac cagactgttc
    28801 ggcgtggccg cgctcaagcg caaacatttc ggacaccaca tgatcgagct ggcggcaggt
    28861 ttcgcactga ccgccattct tgcctatatt ctcgaatccc gtgcaggatc ggtacacgat
    28921 cagggttggg agttttatgc cacagtcgtc tgcctgtacc tgatttttgc gtttccatgt
    28981 tttgtgtggc ggtatttttg gcacacgcgc aacagggaat agacaagcat agaaatgccg
    29041 tctgaaacct gttcagacgg catttgtttc attcaagtgc aggccggcat cgctgtgccg
    29101 gcacgtttca gccggcgata tacgccggtt ttaatatttg cgggcgactg caaattctgc
    29161 caactgccgc aggcgcaggg ctttgtcgcc gaagggttcg agcagcgcga ccgcttcggc
    29221 aaccagtttg tgtgcgtatg agcgcgccgc ttccaagccc atcagtttca cataagtcgg
    29281 cttgtcgttg tctgcatctt tgcccgccgt cttgcccaaa gtcgccgtgt ccgcttcaca
    29341 atccaacaca tcgtcaatga cttggaacgc cagccccagt tttgccgcat aatcgtccaa
    29401 taccgccaga ctgtcttcag acagattcgg gcaggacatc gcccccaata aaaccgccgc
    29461 acggattagc gcacccgttt tcaggctgtg catctgttcc aaatcggctt gaaccatttg
    29521 tttgccgaca ttcgccaaat cgattgcctg accgcccgcc atgcccgcgc tgccgcccgc
    29581 tttcgccaac accgacaaca ttgccaactg gcgtgctgcg ggcagttctg tcggacggct
    29641 taacacgtcg aaggcttggg tttgcaaagc gtcgccgacc agtagcgcgg tggcttcgcc
    29701 atatttgatg tggcaggtcg gtttgccccg acgcaggctg tcgttgtcca ttgccggcat
    29761 atcgtcgtga accaacgaat aggcatggat catttcgatt gccgccattg cctgttctac
    29821 tgcttcatgc acggcttcgc ctaattccga agctgccaga accagcatcg gccgcagacg
    29881 tttgccccca tccaaaaccg cataacgcat ggcttcgtgc agtgtgtgcg gtatttcgtt
    29941 ttcagacggc aaaaagcgtt ccagcagcag ctctgtttgc gcctgcgccc tctgttgcca
    30001 cgctttcaaa tcattcgtcg gattcaaggt tcaactcctt cggcccgtcc gcgtccaaaa
    30061 cctgtaattt ctgttcgact tgcgccagct tggtttggca gtatctgacc agctcgttgc
    30121 cttcctgata ggcggcaagc gcgtcttcca agggcatttc gccctgcata gcttgtgtca
    30181 gcgattcaag gcgcgacaag gcttcttcaa acgatttcgg ggcgtttttc ttcatcgtgt
    30241 ttccttttcg gttgaaaccc cgccacttgg acatctgtcc ttcggggcgg tagaatcaga
    30301 ctttatttgg gaggggtgta agcccttcca aatcaggacg acacataggg cggtgcttta
    30361 agtgtcgtcc tgcgtgttgg aacatagttt cggatgttcc agtaaaaagc ggattgtagc
    30421 atttttgaaa aacggatgcc gtctgaaacc cgaatccggc ttcagacggc atttttccgc
    30481 ccaggcggca aggcgttacc cgggcagttc gtcggtgatg ccctgcaaaa aggcgaggcg
    30541 ttcggggctt gccgccccgg tttgcgcggc ggctttgaag gcgcagccgg gttcggcgcg
    30601 gtgggtgcag ttgtggaagc ggcattgccc gacaaggtgg cggaaatcgg ggaaatagcg
    30661 cggcaaatcg gcggcttgga ggtggtgtaa accaaattct tgcaaacccg gggagtcgat
    30721 gagttgggtt tcgccgttca aatcataaag ccgggcgtgg gtggtggtgt gttttcccga
    30781 gtcgagtgcg gcggaaatgt cgccggtgcg ggcggtttgg ctgcccaaaa gggcgttggt
    30841 cagggtggat ttgcccatac cgctctgccc gagcaggatg ttgctgtgcc cttgcagggc
    30901 ggggcgcagg ctgccggcgt tttccagtgc gcgggtttcg atgacgggat aacccagcgt
    30961 ttcgtagaat ttgagttttt cgcgccaaag ggcggtttcg ggcaggtcgg ctttgttcag
    31021 gacgatgacg gcgcggatgc cggcggcttc ggcggcaagc agggcgcgct gtagcagccg
    31081 cacgctcgga ctcgggacgg cggcggttac gatgaggagt tgggtaacgt tggcggcaat
    31141 gagtttggtt ttccacgcgt cttggcggta gagcaggctt tggcgcggta aaaaatcttc
    31201 aatcacaact tgttcggcgt tgacggggct gatgcggaca cggtcgccgc aggcgaaatc
    31261 gacgcgtttt ttgcgcgtgc tggcttcgta ggttgtgccg tcgggcgtgc gcacgatgta
    31321 gcggcggccg tagctggcgg taatttgggc ggtgtcgttc atggtttctt tggggttggg
    31381 tgtggaaatg ccgtctgaaa acgggtgttc ggacggcatc ggttcagtcg tgctgccact
    31441 cgacgtgttc gttgaggaag ccgccgctct ggtgcgccca gagtttggcg taaagcccgc
    31501 gtttttcgag gagttcggcg tgcgtgcctt cttcgatgat gcggcctttg tcgaggacga
    31561 cgagcctgtc cattgcggcg atggtggaga ggcggtgggc gatggcgatg acggttttgc
    31621 cgtccatcat tttgtcgagg ctttcttgga tggcggcttc gacttcggaa tcgagcgcgc
    31681 tggtggcttc gtccaaaaga agaatcggtg cgtctttgag catcacgcgg gcgatggcga
    31741 tgcgctggcg ttgaccgccg gagagtttca cgccgcgttc gccgacgtgt gcgtcgtagc
    31801 cgcgccgccc tttggcatcg gaaaggtcgg ggatgaagcc ggcggcttcg gcgcgttcgg
    31861 cggcagaaac catttcggca tcggtcgcgt cggggcggcc gtaaataatg ttgtcgcgca
    31921 cggaacggtg cagcagcgag gtatcttgcg tgaccaaacc gatttgggcg cgtaaagatt
    31981 cttgggtaac gccgcttatg tcctgcccgt cgatcgaaac cgtgccgctt tgcggttcgt
    32041 agaagcgcaa aagcaggttg acgatggtgg atttgcccgc gccgctgcgt ccgatcaagc
    32101 cgactttttc gcccgggcgg atggtgaggt tgaagccgtt gagcagcggt ttgcccgctt
    32161 cgtagcagaa atcgatgtgt tcaaatttga ttgcgccttg cggcacgttc agcggcagtg
    32221 cccggggctt gtcgaggatg gtgtgcggtt tggacagggt tgccataccg tcgttgacgg
    32281 tgccgatgtt ttcaaacagc cgcgcggatt cccacatgat gtattgcgac aaaccgttga
    32341 cgcgcaacgc catcgcggtg gcggtggcga ccgcgcccac gccgacctgt ccgttgtgcc
    32401 aaagccagat gcccagtgcg gcggtggaga gggtcaggga ggtgttgacg atgaagctgc
    32461 acgaatgcag cagcgtcgcc agccgcattt gggcgcgcac cgtaaccata aattcttcca
    32521 tcgactgctt ggcataggcg gcttcacgcg cgccgtggga gaagagtttg acggtggcga
    32581 tattggaata ggcatcggta atgcggccgg tcatcagcga gcgggcatcc gcctgccatg
    32641 cggcggtttg ccccaatttg ggaatcagca ggcgcatcac cgaagcgaaa ccgacaatcc
    32701 agccgataaa gggcagcagc agccatgagt cgagcgaggc gagaatcacg ccggaggtaa
    32761 tgaaatacac cgacacataa acgaccatat cggcaaccgt catcaccgcg tcgcgcaacg
    32821 ccagcgcggt ctgcatgact ttggcggaca cgcgtccggc aaattcgtcc tgataaaaac
    32881 cgaggctttg gttcagcatc aggcggtgga agttccagcg caggcgcatg gggaacacgc
    32941 cctgaagggt ttgcaggcgc acgttggacg cggcaaacgc ccacgcaacc gaaaatacca
    33001 tcatcgccgc cattgccgcc agttcccaac ctttttcggc aaacagttcg gcgggcgcgt
    33061 atttgccgag ccactccacg attttgccca taaattgaaa aaccagggct tccataatgc
    33121 cgatgccggc ggtcagcgca gccagggcgg ctatccattt ccgcacgccg gccatgctgc
    33181 tccagacaaa ccgccacaag cctttttctg gcgttttcgg ggcggcttcg ggataagggt
    33241 cgattcggga ctcgaaccag gaaaatattt tgttcaacat tgttttcgat ttcggtaaaa
    33301 cagtttcaga cggcatcaaa cacaatgccg tctgaaagga aggacaataa cgccatttta
    33361 cgggaaaagc cgtcgggaag acagcgcgag gcggaaacgc agggtttcgt cagggcaaac
    33421 gccgcgccgc cttcagacgg cattatttca gcaggttttt caaagcaagg cgcacgcctt
    33481 cgcccacgtc cgtcccctcc ggaacgcctt tgaccgccgc ttttgcttcg cgttcgctgt
    33541 aacccagcgc aagcagcgtg ctgacgatgt cttccgtttc gtcggcggcg ggtgcggcgg
    33601 caaacagccc gtccgttacc gtatgcgcga ccagcttgcc gcgcagttcc aagaccatac
    33661 gttcggcggt ttttttgccg attcccggcg cggaagacag gcgtttgaca tcttcttcgg
    33721 caaccgcccg cgccagctcg tctgccgtca tcgctgacaa aatgcccaaa gccgttttcg
    33781 cgccgatgcc gccgacctta atcagttggc ggaaggtctt gcgttcttcc gcagtggcaa
    33841 aaccaaataa aagatgtgcg tcttcccgaa tgataagctg ggtaaacagt tgtacgcttt
    33901 cacccacggg cggcaggttg tagaaggtct gcatcgatac gtcggcctca tagccgacac
    33961 cgttgacatc gatgacgatt tgcggagggt ttttttcaac cagtttgccg gtcagtctgc
    34021 tgatcatgtg tgccgaatcc tgaagtgtcg ggtgcaaaat gccgtctgaa accggttcgg
    34081 gcttcagacg gcacggattg tatcaaattc agtcgtcgcg gcgggaggaa atcacgcggc
    34141 cggtacgggc atcgacaacg actttgtatt cctgtccgtt tttgacgatt tcgacatcat
    34201 agtgcggacg gccgttgtcg tgttcgagat cgatgtcggt gattttgccg ccgacacgcg
    34261 ccaacgctgc tttttcggct tgggcgcggc tgatgatttt gtcttgtttg ttgtgttggt
    34321 gtgcggcgtg tccgtggtcg tcatcgccgt gtccgtcgtg gtgggcgagc gcgggggcgg
    34381 aaatgctcag cagtgcggtt gcggcggagg tcaagagaag gtgtttgatg ttcatatttt
    34441 gcctttgtaa atcgtgggtt ggaaaatgtg gatattaata aggtatcaaa taaccgtcag
    34501 ccggcggtca ataccgcccg aaccataccg cgtgcctgag cttcggcttc ggcggcgcgt
    34561 tcctgcgagg caaacggtcc cattttgacg acgtattcgt aacggcgttt ttcaaccgag
    34621 aggttcgtac ccgatgacga aacggcgaag ttttgggcgg cttggttcag ataggcttgt
    34681 gcttcgtgtt ccgtaccgaa agatttcaag tcgataaaga tgtctttgtt ttcggcaacc
    34741 ggtgcggatt ggcccgggac gatttgttcg attttgacgt gtgccgtccc ttggttgaca
    34801 aagcccaatt tttgcgcggc ggctttggat acgtcgatga tgcggttgcc gtggaagggg
    34861 ccgcggtcgt tgacgcggac gatgacgctt ttgccgtttt tggtattggt tacgcgcaca
    34921 tagctgggga tgggcagggt tttgtgggcg gcggtaaagg cgttcatatc gtatcgttct
    34981 ccgccggaag ttttgcgccc gtgaaacctg ccgccgtacc acgaggcgtt gccggtttgc
    35041 gtgaattcgg cgacttggtt tttcggcgtg tagcgttttc cggcgacttt gtagctgcgg
    35101 ttggcggagg cgtgcagttt ttctgccttg accactgcgt cggcggatgc cgtctgaagg
    35161 gagtgtgtgc cgaatgcggc ggtgagaagg aaaagggttt ttcgggttaa agtcaaaacg
    35221 tgttccgttc ttgagttgaa gacgaatggg catcatgccc gccggatacg ttccgaaccg
    35281 ccgtacagtg cggacggcgg ttcggaatgt gtccggatag gttttcagac ggcatgaact
    35341 tgcgttcaaa cgccgcctgc gtaaccgtgt tgccgccacg cttcaaagag aatcacggca
    35401 acggtattgg aaaggttcat actccgactg ccgggctgca tgggcaggcg gattttttgc
    35461 gcggcgggca ggctgtcgag gatgtcggca ggcagtccgc gcgtttccgg cccgaacagt
    35521 aaaacgtcgc ctttttgaaa cgcggtttca tcggggcgcg ccgtgccttt ggtggtcagg
    35581 gcgaaaatgc gcctgcctgc gagtgccttg aggcagtcgt cgaagttttc gtgcaccgtc
    35641 aggctggcga attcgtggta gtcgagcccg gcgcgtttca ttttggcgga atccaatggg
    35701 aagccgagcg gtttgacaag gtgcaaatcc gcgccggtat tggcgcacag gcggatgatg
    35761 ttgcccgtgt tcggcgggat ttccggctgg tataaaacga tggtaaacat aaatatcaat
    35821 cacttatagg cgcgtaacct tgccacaagg cggatggggt gtcaaaaaat ttagttattt
    35881 tttcattggc gtgcgtgcca gcgtccagca gcagatgcgg ttcgcgcccg attttttcag
    35941 cgtctttgcc agttcgtcca gcgtcgcgcc ggtggtaaag acatcgtcga ttaacagaat
    36001 attacagttt tccggtatcg gtgtgcggat ttcaaaggcg tttttgatgt ttcgccgccg
    36061 ttcgctgcct ttgagcgtgc tttgcggcgg gcggtggtgt cggaatacgg tgtgtcgggg
    36121 cagtatctgc cagccgtagc gttgtgccaa caacccgacg atgctttcac tttggttgaa
    36181 cccgcgttgc agcagccgct ccctgcttag cggtacgggc aggacgaaat cgaaacattc
    36241 gtctgcaagc cggtcgggcg ggttttgtac catcaggttt gccaatgggc gaaccatgcc
    36301 caaatctgcc aagtgtttca gcgtacgtat catgttgctg acgggcggtt cgtaatgcag
    36361 cgaagcccac atccggtcga atgcgggcgg ttttttctga cagccgccgc acaccgcgcc
    36421 gccttggatg tgcctgaaac acagggggca gctgtttgcc gcgtcggtgc ggtatgccgc
    36481 caaatcgtcg cggcagccgg cgcagatgcc gtctgaaacg ccggacgaac cgtggcataa
    36541 tacgcaacgc ctgatagtgg gcgcgtctgc gatgcgccgc caacgagaga gaaaatccat
    36601 gcctgatgcc gtcaaaaaag tttacctgat acacggttgg ggggcgaacc gccacatgtt
    36661 cgacgatttg atgccgcgcc tgcctgcaac gtggccggtg tccgccgtcg atttgcccgg
    36721 acacggcgac gcgcccttcg cgcaaccctt cgatattgag gcagccgccg acgctgttgc
    36781 cgcacaaatc gatacgcccg ccgacattct cggctggtcg ctcggcggat tggtcgcgct
    36841 gtatctggcg gcgcgccatc ccgacaaagt ccgttcgctc tgcctgacgg cgagtttcgc
    36901 ccgactgacg gctgacgaag actatcccga agggcttgcc gcgcctgcat tgggcaaaat
    36961 ggtcggcgcg ttccgttcgg attatgccaa acatatcaaa cagtttctac aactccagct
    37021 tctgcacacg cctgatgcgg acggaatcat aggcagaatc ctgcccgatt tggcgcgctg
    37081 cggcacgccc tccgccttac aggaagcttt ggacgcggcg gaaagggcgg atgcgcggca
    37141 tttgttggac aagatagatg ttccggtact gctggtgttc ggtagcaaag acgcgattac
    37201 gccgccgcgc atgggcgagt atctgcaccg ccgtttgaaa ggcagcaggc tggttgtgat
    37261 ggaaaaggcg gcacacgcgc cgtttttgag ccatgcggaa gcgtttgccg cgctgtaccg
    37321 cgactttgtc gaaggggttt gacatgaatc cgcaggacaa atgctggcag gttcaccgcc
    37381 atcttgccga acatgccgac caacggctga cactcgtccg caacgcgccc aaacatatcc
    37441 tgcttgccgg ggcggatgcg gacatcagcc gcagcctgct ggcgaaacga tatccgcagg
    37501 cggtatttga agaatacgat tcccgtgcgg attttttggc ggctgccgca gccgtgcgca
    37561 agggcggttt ttggcaaagg tttacgggta agggcgtggt gcaacactgc caatccccga
    37621 ccgcgccgct gcccgaagcg tgtgccgata tgttgtggtc gaatctcgga ctgttggcgg
    37681 cggaacaaat ccttcctgtg ctgcacaact gggcgcgcgc gctggagacg gacgggctgc
    37741 tgttttttac ctgcttcggg cgcgacactt ttaccgaact gaaatgccgt ctgaaagaaa
    37801 acggcattga aagccgcagc gtgatgtttc ccgatatgca cgacttgggc gatatgcttg
    37861 ctgaaaacgg gttttacgac cccgttaccg atacggcgaa gctggtgttg gattacaaaa
    37921 aggcggaaac gttttgggcg gatatggaca cgctgggcgt ttggcgggcg atgtcgtgga
    37981 acgatgaaaa cgccgcgcgt tcgtgtgtcg ggacaatatt tgaacgggaa ggcggtttga
    38041 gtattacgct ggaaacagtg tacggacacg ccgttaaaaa actgatgctg ccgcaagggg
    38101 agaacgtggt gcagtttttt ccgaagagat gatgtgcaga tgccgtctga agccgtttcc
    38161 aagtttcaga cggcatttgt ttgtgaaaac cgacagaact aaaggaaatg ccgatgtata
    38221 gtgaattaaa tttaaaccag tac
//
LOCUS       DBBZXU010000007        35168 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.007, whole genome shotgun sequence.
ACCESSION   DBBZXU010000007 DBBZXU010000000
VERSION     DBBZXU010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 35168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35168
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.007"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            81..1046
                     /locus_tag="ACJJDE_000306"
     CDS             81..1046
                     /locus_tag="ACJJDE_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7540298.1"
                     /translation="MLRLTALAVCTALALGACSPQNSDSAPQAKEQAVSAAQTEGASV
                     TVKTARGDVQIPQNPERIAVYDLGMLDTLSKLGVKTGLSVDKNRLPYLEEYFKTTKPA
                     GTLFEPDYETLNAYKPQLIIIGSRAAKAFDKLNEIAPTIEMTADTANLKESSKERIDA
                     LAQIFGKQAEADKLKAEIDASFEAAKTAAQGKGKGLVILVNGGKMSAFGSSSRLGGWL
                     HKDIGVPAVDEAIKEGSHGQPISFEYLKEKNPDWLFVLDRSAAIGEEGQAAKDVLDNP
                     LVAETTAWKKEQVVYLVPETYLAAGGAQELLNASKQVADAFNAAK"
     gene            1064..1240
                     /locus_tag="ACJJDE_000307"
     CDS             1064..1240
                     /locus_tag="ACJJDE_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540299.1"
                     /translation="MPSETRMQTASCVSDGIARYGRYRGNGGKRFYWNLPYPLPDTEA
                     SNKAFRSDGSDCLV"
     gene            1275..2243
                     /locus_tag="ACJJDE_000308"
     CDS             1275..2243
                     /locus_tag="ACJJDE_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7540300.1"
                     /translation="MTAKPFSLNLTNLLLLAVLFAVSLSVGVADFRWSDVFSLSDSQQ
                     VMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFVEPSMAGAGQSAALGLLLMSLLL
                     PAAPLPVKMSVAAVAALIGMLVFMMLIRRLPPTAQLMVPLVGIIFGGVVEAVATFIAY
                     ENEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLG
                     LNRTAVLWSGLIIVALITSLVIVTVGNIPFVGLVVPNIISRLIGDRLRQSLPAVALLG
                     ASLVLLCDIIGRVIVFPFEIPVSTVFGVLGTALFLWLLLRKPAHAV"
     gene            2233..3207
                     /locus_tag="ACJJDE_000309"
     CDS             2233..3207
                     /locus_tag="ACJJDE_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chelate uptake ABC transporter family
                     permease subunit"
                     /protein_id="HGG7540301.1"
                     /translation="MPSEKNIGFMAGSSRPLWVAFALLLVSCVLFLTLNVKGDWDFVL
                     HLRLTKLAALLMVAYAVGVSTQLFQTLTNNPILTPSILGFDSLYVFLQTLLVFTFGGV
                     GYTSLPAVGKFGFELVVMMGGSLLLFYTLVKQGGRDLSRMILIGVIFGILFRSLSSLL
                     SRMIDPEEFMAAQANMFAGFNTVHSELLGIGALILLVSAAVVWRERYRLDVHLLGRDQ
                     AVNLGISYTRNTLWILLWIAALVATATAVVGPVSFFGLLAASLANHFSPSVRHSVRLP
                     MTVCVGGILLVGGQTVFEHFLGMKAVLSVVVEFAGGLVFLYLVLKHKK"
     gene            3252..3878
                     /locus_tag="ACJJDE_000310"
     CDS             3252..3878
                     /locus_tag="ACJJDE_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FmdE family protein"
                     /protein_id="HGG7540302.1"
                     /translation="MTQERFPSFFNQAPTITVRDALAEFLGAAENGILTYRYADAVRL
                     CGHSCPTVAGAYLMVIKGLKALYGEELPERGGIEAAMQGARDEGTVGVTASVVQLLTG
                     AAPETGFGGIGMQGRFARRNLLSFGAGEINGTLTLRRKDNGKTVAVSLNAALQPFAPE
                     MRELMPKAVGGSASAEELERFGQLWQARVKAFLTESADDPQFVIVREV"
     gene            3962..4720
                     /locus_tag="ACJJDE_000311"
     CDS             3962..4720
                     /locus_tag="ACJJDE_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7540303.1"
                     /translation="MITIRNVSYRIGTRPILDNVSLDIPEGGITALVGPNGAGKSTLF
                     SFMARLRPLESGSIAYRGKNLACTPTAELAKTLSILTQENSIMSRITVRDLLMFGRYP
                     YHQGRPTAECRRIVNGAIEEFHLQDFADRYLTELSGGQRQRAMIAMVFCQRTDYVLLD
                     EPLNNLDMYHARSLMQILRRLTDEHKRTTVVVLHDINQAAAYADHVVAMKNGQVAMQG
                     KPDDIFTAANIKTLFDMDVSVLDHQSKKLIVHHI"
     gene            complement(4779..5117)
                     /locus_tag="ACJJDE_000312"
     CDS             complement(4779..5117)
                     /locus_tag="ACJJDE_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030234 - enzyme regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HGG7540304.1"
                     /translation="MKKIEAIVKPFKLDDVREALTEIGITGMTVSEVKGFGRQKGHTE
                     IYRGAEYAVDFLPKVKIELVLADDAVERAIDVIVEVARSGKIGDGKIFVLPVEEAIRI
                     RTGERADAAV"
     gene            5582..9568
                     /gene="purL"
                     /locus_tag="ACJJDE_000313"
     CDS             5582..9568
                     /gene="purL"
                     /locus_tag="ACJJDE_000313"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HGG7540305.1"
                     /translation="MSVVLPLRGVTALSDFRVEKLLQKAAALGLPEVKLSSEFWYFAG
                     SEKALDAATVEKLQALLAAQSVEQTPKAREGLHLFLVTPRLGTISPWASKATNIAENC
                     GLAGIERIERGMAVWLEGALTDRQKQQWAALLHDRMTESVLPDFQTASKLFHHLESET
                     FSTVDVLGGGKEALVKANTEMGLALSADEIDYLVENYQALQRNPSDVELMMFAQANSE
                     HCRHKIFNADFILNGEKQPKSLFGMIRDTHNAHPEGTVVAYKDNSSVIEGAKIERFYP
                     NAAENQGYRFHEEDTHIIMKVETHNHPTAIAPFAGAATGAGGEIRDEGATGKGSRPKA
                     GLTGFTVSNLNIPDLKQPWEQAYGKPDHIASPLDIMIEGPIGGAAFNNEFGRPNLLGY
                     FRTFEEKFDGQVRGYHKPIMIAGGLGSIQAQQTHKDEIPEGALLIQLGGPGMLIGLGG
                     GAASSMDTGTNDASLDFNSVQRGNPEIERRAQEVIDRCWQLGDKNPIISIHDVGAGGL
                     SNAFPELVNDAGRGAVFKLREVPLEEHGLTPLQIWCNESQERYVLSILEKDLDAFRAI
                     CERERCPFAVVGTATGDGHLKVRDDLFSNNPVDLPLNVLLGKPPKTTRTDKTVTPYAT
                     EGNPFGKKPFNAGDIDITEAAYRVLRLPAVAAKNFLITIGDRSVGGMTHRDQMVGKYQ
                     TPVADCAVTMMGFNTYRGEAMSMGEKPAVALFDAPASGRMCIGEAITNIAAVNIGDIG
                     NIKLSANWMAACGNEGEDEKLYRTVEAVSKACQALDLSIPVGKDSLSMKTVWQDGADK
                     KSVVSPLSLIISAFAPVEDVRKTVTPELKNVEDSVLLFIDLGFGKARMGGSAFGQVYN
                     NMSGDAPDLDDTSRLKAFYNVIQQLVAEDKLLAYHDRSDGGLFAVLVEMAFAGRCGLD
                     IDLNLLLAQTFITNHTALSQSLRTEEVKALAEWQETIARTLFNEELGAVIQVRKQDVA
                     DIINLFYQQQLHHNVFEIGTLTDENTLIIRDGQTHLISDNLIKLQQTWQETSHQIQRL
                     RDNPACADSEFALIGDNERSALFADVKFDVNEDIAAPFINSGAKPKIAILREQGVNGQ
                     IEMAAAFTRAGFDAYDVHMSDLMAGRFRLADFKMLAACGGFSYGDVLGAGEGWAKSIL
                     FHPALRDQFAAFFADPDTLTLGVCNGCQMVSNLAEIIPGAEAWPKFKRNLSEQFEARL
                     SMVHVPKSASLILNEMQGSSLPVVVSHGEGRADFALHGGNISADLGIALQYVDGQNQV
                     TQTYPLNPNGSPQGIAGITNADGRVTIMMPHPERVYRAAQMSWKPEGWTELSGWYRLF
                     AGARKALG"
     gene            9663..10421
                     /gene="gloB"
                     /locus_tag="ACJJDE_000314"
     CDS             9663..10421
                     /gene="gloB"
                     /locus_tag="ACJJDE_000314"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HGG7540306.1"
                     /translation="MKITPVKALTDNYIWMIQHGNHAVCVDPSEPSPVLEFLVRNRLM
                     LAQTWVTHPHPDHEGGAAALWRGYMESPVYGESDIEAATHTVTAGTQFTFGDGQVTVW
                     ATPGHTDRHTSYLLETSDGIHVFCGDTLFSAGCGRVFTGTIEQLYDSFQRFNRLPENT
                     LFYPAHEYTAANLRFAAHIEPDNADIQTALKAAAHTPTLPVTLAHERRVNPFLRVDLP
                     HVRDRAEALSGKTLNSSLDTFVALRELKNQYRTK"
     gene            10735..15210
                     /gene="mspA"
                     /locus_tag="ACJJDE_000315"
                     /gene_synonym="ausI"
     CDS             10735..15210
                     /gene="mspA"
                     /locus_tag="ACJJDE_000315"
                     /gene_synonym="ausI"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin/serine protease MspA"
                     /protein_id="HGG7540307.1"
                     /translation="MRFTHTTPFCSVLSTLGLFAVSPAYSSIVRNDVDYQYFRDFAEN
                     KGAFAVGASNISIQDKQGKILGRVLNGIPMPDFRVSNRQTAIATLIHPQYVNSVKHNV
                     GYGSIQFGNDTQNPEEQAYTYRLVSRNPHPDYDYHLPRLNKLVTEISPAALSSVPLLG
                     NGQPKANAYLDTDRFPYFVRLGSGTQQVRKADGTRTRTAPAYQYLTGGTPLKVLGFQN
                     HGLLVGGSLTDQPLNTYAIAGDSGSPLFAFDKHENRWVLAGVLSTYAGFDNFFNKYIV
                     TQPEFIRSTIRQYETRLDVGLTTNELIWRDNGNGDSTLQGLNERITLPIANPSLAPQN
                     DSRHMPSEDAGKTLILSSRFDNKTLMLADNINQGAGALQFDSNFTVVGKNHTWQGAGV
                     IVADGKRVFWQVSNPKGDRLSKLGAGTLIANGQGINQGDISIGEGTVVLAQKAASDGS
                     KQAFNQVGITSGRGTAVLADSQQIKPENLYFGFRGGRLDLNGNNLAFTHIRHADGGAQ
                     IVNHNPDQAATLTLTGNPVLSPEHVEWVQWGNRPQGNAAVYEYINPHRNRRTDYFILK
                     PGGNPREFFPLNMENSTSWQFIGNNRQQAAKQVAQAENARPDLITFGGYLGENAQTGK
                     AAPSYSKTNIEWVNGPNTPHKPSPYTNTPTRTGAGVPTITASKKAATPAPTSHGMPTA
                     PKTGNFSDMTGEAAIEKTRHIANAAVYGRPEYRYNGALNLHYRPKRTDSTLLLNGGMN
                     LNGEVLIEGGNMIVSGRPVPHAYDHQAKREPVLENEWTDGSFKAARFTLRNHARLTAG
                     RNTAHLDGDITAYDLSGIDLGFIQGKTPECYRSYHSGSTHCTPNAVLKAENYRALPAT
                     QVRGDITLNDRSELRLGKAHLYGSIRAGKDTAVRMEADSNWTLSQSSHTGALTLDGAQ
                     ITLNPDFANNTHNNRFNTLTVNGTLDGFGTFRFLTGIVRKQNAPPLKLEGDSRGAFQI
                     HVKNTGQEPQTTESLALVSLNPKHSHQARFTLQNGYADLGAYRYILRKNNNGYSLYNP
                     LKEAELQIEATRAEHERNQQAYNQLQATDISRQVQHDSDATRQALQAWQNSQTELARI
                     DSQVQYLSAQLKQTDPLTGILTRAQNLCAAQGYSVDICRQVAKAADTNDLTLFETELD
                     TYIERVEMAESELDKARQGGDAQAVETARHAYLNALNRLSRQIHSLKTGVAGIRMPNL
                     AELISRSANTAVSEQAAYNTGRQQAGRRIDRHLTDPQQQNIWLETGTQQTDYHSGTHR
                     PYQQTTNYAHISIQTGITDRLSVGTILTDERTNNRFDEGVSARNRSNGAHLFVKGENG
                     ALFAAADLGYSNSRTRFTDYDGAAVRRHAWDAGINTGIKIDTGINLRPYAGIRINRSN
                     GNRYVLDGAEINSPAQIQTTWHAGIRLDKTVELGQAKLTPAFSSDYYDTRQNSGSALS
                     VNDRTLLQQAAHGTLHTLQIDAGYKGWNAKLHAAYGKDSNTARHKQAGIKIGYNW"
     gene            15442..16896
                     /gene="mgtE"
                     /locus_tag="ACJJDE_000316"
     CDS             15442..16896
                     /gene="mgtE"
                     /locus_tag="ACJJDE_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015095 - magnesium ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015693 - magnesium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter"
                     /protein_id="HGG7540308.1"
                     /translation="MSIEPTPPNLENDGIENDVERVSADFDRVHSLCEILEPAFEQIE
                     NGTPLEDAPLRDKLTELTVLLSELHPADVAAVLESLPPRERNIVWILVKPEDDGEVLL
                     EVSDAVRETLIESMDKDELLAAVDDLDADELAELADDLPHQVVYEALQTRDEEERAQV
                     KAAMSYEDNQVGAIMDFELVSIRADVACEVVLRYLRRFDSLPDHTDKIFVVDENDVLQ
                     GVLPIRKLLVADPEDLVENVMAKDVVRFRAEDDVEEAAQAFERYDLVTAPVVDENKKL
                     IGRITVDEMVDVIREESEADMLNMAGLQEEEDLFAPVLDSVKNRWMWLAVNLCTAFLA
                     SRVIGAFEGSIEKIVALAALMPIVAGIGGNSGNQTITMIVRAMAMGQLTGMQAGRLLK
                     KEVGVALVNGIIWGTVMGAVSWLLYGSLGIGLVMIAAMTLNLLLAATVGVLIPVVMEK
                     FGRDPALGSSVLITAVTDSGGFLIFLGLATLFLL"
     gene            complement(16982..17890)
                     /gene="hslO"
                     /locus_tag="ACJJDE_000317"
     CDS             complement(16982..17890)
                     /gene="hslO"
                     /locus_tag="ACJJDE_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HGG7540309.1"
                     /translation="MNQTAINRADVRTRFIFDDMPVRGLHVRLENVWQHIVKQKNYPA
                     AIRRALGELLAAGVLLSGNLKNEGTLIVQVQGQGRLKMLVAEATSDRTVRATARWDEA
                     AEIADDESLGDLLGGNGVFVLTLQPKDGEPWQGVVPLEGDGIAQMLMNYMKRSEQLDT
                     HIVLSASDEAAGGLLVQRLPEEVLDEEAWEHVSTLARTLTAEELAELDAQHVLYRLFH
                     ETPPRVFEPETFEFSCTCSRGKVSDMLLMLGGEEVGGVVAEQGSIEVDCDFCHSKYVF
                     DETDVNALFGEDVVGVAKGLPRHTVQ"
     gene            18135..18890
                     /locus_tag="ACJJDE_000318"
     CDS             18135..18890
                     /locus_tag="ACJJDE_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7540310.1"
                     /translation="MDSFFKPAVWAVLWLMFAVRPALADELTNLLSSREQILRQFAED
                     EQPVLPINRAPARRAGNADELIGSAMGLNEQPVLPVNRVPARRAGNADELIGNAMGLN
                     EQPVLPVNRAPARRAGNADELIGNAMGLLGIAYRYGGTSVSTGFDCSGFMQHIFKRAM
                     GINLPRTSAEQARMGTPVARSELQPGDMVFFRTLGGSRISHVGLYIGNNRFIHAPRTG
                     KNIEITSLSHKYWSGKYAFARRVKKNDPSRFLN"
     gene            18909..19127
                     /locus_tag="ACJJDE_000319"
     CDS             18909..19127
                     /locus_tag="ACJJDE_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540311.1"
                     /translation="MSMPEIPKWYDDDGQIVSCTEKIKVMSENMAELYQTAQDAFEDA
                     LLMGCGERQLRDYLLALIEGLENPYRKV"
     gene            19272..19616
                     /locus_tag="ACJJDE_000320"
     CDS             19272..19616
                     /locus_tag="ACJJDE_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HGG7540312.1"
                     /translation="MNIIRALLIILGCLAAGETAVFLAGIKLPGSIVGMGVLFALLQA
                     GWVKTSWLQQLTDALMANLTLFLVPPCVAVISYLDLIADDWFSILVSASASTLCVLLV
                     TGKVHRWIRSII"
     gene            19616..20308
                     /locus_tag="ACJJDE_000321"
     CDS             19616..20308
                     /locus_tag="ACJJDE_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LrgB family protein"
                     /protein_id="HGG7540313.1"
                     /translation="MNEILRQPSVLLFLTLAVYALAIIVRTRTGNIFCNPVLVSTIVL
                     IAYLKILDIDYAVYHNAAQFIDFWLKPAVVVLAVPLYQNRRKIFNQWLPVIVSQLAGS
                     VTGIVTGMYFAKWLGAEREVVLSLASKSVTNPIAIEITRSIGGIPAITAATVIIAGLV
                     GQIAGYKMLKNTVVMPSSVGMSLGTASHAMGIAASLERSRRMAAYAGLGLTFNGVLTA
                     LIAPLLIPVLGF"
     gene            20375..21595
                     /gene="argJ"
                     /locus_tag="ACJJDE_000322"
     CDS             20375..21595
                     /gene="argJ"
                     /locus_tag="ACJJDE_000322"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HGG7540314.1"
                     /translation="MAVNLTEKTAEQLPDIDGIALYTAQAGVKKPGHTDLTLIAVAAG
                     STVGAVFTTNRFCAAPVHIAKSHLFDEDGVRALIINTGNANAGTGAQGRIDALAVCAA
                     AARQIGCKPNQVLPFSTGVILEPLPADKIIAALPKMQPAFWNEAARAIMTTDTVPKAA
                     SREGKVGDKHTVRATGIAKGSGMIHPNMATMLSFIATDAKVSQPVLQLMTQEIADETF
                     NTITVDGDTSTNDSFVIIATGKNSQSEIDNIADPRYAQLKELLCSLALELAQAIVRDG
                     EGATKFITVRVENAKTRDEARQAAYAVARSPLVKTAFFASDPNLGRLLAAIGYAGVAD
                     LDTDLVEMYLDDILVAEHGGRAASYTEAQGQAVMSKAEITVRIKLHRGQAAATVYTCD
                     LSHGYVSINADYRS"
     gene            21655..23064
                     /locus_tag="ACJJDE_000323"
     CDS             21655..23064
                     /locus_tag="ACJJDE_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HGG7540315.1"
                     /translation="MTSTFPRRLARKIRQTRRLSRKSIAFLFLLAGSALVALTALFFA
                     HLADFALELNAKLVQQYPWFAWVALPLGLPLIAWLTRKFAPFTAGSGIPQVIASLSLP
                     YGAQKTRLIRLGQTLLKIPLTFLGMLFGASIGREGPSVQVGAAVMGAWGAWCKKHGLA
                     FKGMQENDLMAAGAAGGLAAAFNAPLAGVIFAIEELGRGIMLRWERQILLGVLASGFI
                     QVAIQGNNPYFSGFNGGVLEHIFLWVALSGLVCGAAGGLFGRLLYRGAAAFAPRKIRG
                     FIRNRPLLLAALMGLLLALLGTFYQGKTYGTGYHEAAQALHGIYEAPFGLAAAKWLAT
                     VFSYWAGVPGGIFTPSLTIGAVLGEHIAAIADISQGANIIVLICMAAFLAGATQSPIT
                     SAVVVMEMTGGQSLLFWMLIACIFASQVSRQFSPRPFYHASGMRFRQRVLQETTAQTG
                     NAPARPQTANSKTGMPSEN"
     gene            23254..24645
                     /gene="hrpA"
                     /locus_tag="ACJJDE_000324"
     CDS             23254..24645
                     /gene="hrpA"
                     /locus_tag="ACJJDE_000324"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003724 - RNA helicase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HGG7540316.1"
                     /translation="MFPDFSQTLSKDRHFLRSAFKNPNKYGGLSKVEEKYRKSHEIFL
                     KRLAALPKPEFDNTLPVHEKLDEIKKTVAEHQVTIICGETGSGKTTQLPKICLELGRG
                     AAGLIGHTQPRRLAARSVAERIAEELKSEIGSAVGYKVRFTDHTSRDACVKLMTDGIL
                     LAETQTDRYLAAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAER
                     FSQHFNGAPVLEVSGRTYPVEILYRPLIGKDEDDAEIELTDAIVDAADELARYGEGDI
                     LVFLPGEREIREAAEALRKSTLRRNDEILPLFARLSHAEQHKIFHPSGAKRRIVLATN
                     VAETSLTVPGIKYVIDTGLARVKRYSARAKVEQLHIEKISQAAARQRSGRCGRVSAGV
                     CIRLFSEENFNNRPEFTDPEIARSNLAAVILRMASLKLGDVAAFPFLEMPDSRYINDG
                     FQVLLELGAVEAA"
     gene            24746..25873
                     /locus_tag="ACJJDE_000325"
     CDS             24746..25873
                     /locus_tag="ACJJDE_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HGG7540317.1"
                     /translation="MKHLLIDFENVQPQNLDKLLTENTHIWLFIGVLHKMLPISLVQS
                     LLRFGERVHLVQLQKTGKNALDFYLSYYLGQITATDPNAQIGILSRDGGYDVLVEHIL
                     KNHQAKGIVRLANIDEVQHQKITTEPPSALLENTPQPETTLKPQQPLTSYFQAALTAL
                     RRPDAFRPCRLHNLRQNLRKHILSDLFKEKTDEECEITTANVINKLKAQNFISIDEQE
                     TVSYHLSDNDLLQRIQRHILSQRPKTYADFQAVVQNRADALHLTVGTNDIQSFARHLR
                     DQNLIRQNNGKIEYAPFTEPKPQPTPKQPKKTAWEPDEIIWKKVIAALSLKNRPNKTK
                     TLRNTIQALTKSNAQETDKLLQHLQDTQVLRIDGTKIVYIK"
     gene            26050..27627
                     /gene="lpt3"
                     /locus_tag="ACJJDE_000326"
     CDS             26050..27627
                     /gene="lpt3"
                     /locus_tag="ACJJDE_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipooligosaccharide phosphoethanolamine
                     transferase"
                     /protein_id="HGG7540318.1"
                     /translation="MMKKSLFVLFLYSSLLTASEIAYRFVFGIETLPAAKMAETFALT
                     FVIAALYLFARYKTSRLLIALFFAFSIIANNVHYAVYQSWMTGINYWLMLKEVTEVGS
                     AGASMLDKLWLPALWGVAEVVLFCSLAKFRHKTHFSADILFAFLMLMIFVRSFDTKQE
                     HGISPKPTYSRIKANYFSFGYFVGRVLPYQLFDLSKIPVFKQPAPSRIGQGSIQNIVL
                     IMGESESAAHLKLFGYGRETSPFLTRLSQADFKPIVKQSYSAGFMTAVSLPSFFNVIP
                     HANGLEQISGGDTNMFRLAKEQGYETYFYSAQAENQMAILNLIGKKWIDHLIQPTQLG
                     YGNGDNMPDEKLLPLFDKINLQQGRHFIVLHQRGSHAPYGALLQPQDKVFGEADIVDK
                     YDNTIHKTDQMIQTVFEQLQKQPDGNWLFAYTSDHGQYVRQDIYNQGTVQPDSYLVPL
                     VLYSPDKAVQQAANQAFAPCEIAFHQQLSTFLIHTLGYDMPVSGCREGSVTGNLITGD
                     AGSLNIRDGKAEYVYPQ"
     gene            27729..30935
                     /locus_tag="ACJJDE_000327"
     CDS             27729..30935
                     /locus_tag="ACJJDE_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3418 domain-containing protein"
                     /protein_id="HGG7540319.1"
                     /translation="MDARSNPANVSDGLQNSSSHIGTNTRYRLTKLGEQMARLPIDPK
                     IARILLAAKKHDCMAEILVIASALSIQDPRERPLEARDAASKAHERFTDKQSDFLAYL
                     NIWDSFQRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAA
                     FRRSPEVRQLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGL
                     IANVGMKSPDGNDYTSTRGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAAIQ
                     PEWIEQEAPHLVRYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAR
                     EIFIRGALVAQECDLKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLP
                     EMAWKDAQGSVWGSEDSVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWV
                     ENPTSAATAKTVGFDNPTYATQQPTPSPEREGRGEGKTVAAQTNFSATAANPLPQERE
                     QSASASTFSDDLRPANLQQTAPSPVGEGWGESKTVATQTNFSATSTLSDDPKPKKQPA
                     PQKGRLKPLPLADIRTFQAWLKTAECDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQT
                     ADGKFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPK
                     QIRRICVPVPDFITKFLESNPDRQATIIPQLAHFIAKSASDMRILEQIDQDAWAAQEL
                     PEHCYLNLRIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQEFERDNVTTWDIGT
                     LPESIKFARGKQQLTGYLGLQKEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQ
                     VKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKR
                     ARSRLPAVKEALSRYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAPGFATRTPWA
                     QWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGQPISDNL
                     AAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIF"
     gene            31002..31832
                     /locus_tag="ACJJDE_000328"
     CDS             31002..31832
                     /locus_tag="ACJJDE_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7540320.1"
                     /translation="MSLENFQLIKTQLGVPSYENDRVAIYQGDCIQLMDKISKGSFQM
                     TITSPPYNIGKEYESILDLEHYLEWCERWMQSIHHLTEDSGCFWLNLGYLHVEKKGLA
                     VPIPYLLWDKTNFFLLQEVVWNYAAGVACRNRFSPRNEKLLWYVKNPAKYTFNLDAVR
                     DPNVKYPNQKKNGKLKCNPLGKNPTDVWQIAKVTSGRNRSSRERTAHPAQFPLELIER
                     IIRASSNQNDVILDPFIGSGTTALAGLKNNRFVIGFEINDEYIDIIKERFKEYDLQNT
                     "
     gene            complement(31889..32488)
                     /locus_tag="ACJJDE_000329"
     CDS             complement(31889..32488)
                     /locus_tag="ACJJDE_000329"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ScaI family restriction endonuclease"
                     /protein_id="HGG7540321.1"
                     /translation="MNRSKISPYASLNEELWISKTEELIKQHPLSEKEIVQLCLDSWE
                     NIFSSRIGNLQIGKNFFPSPQIVGALLHALIPANIEARFENWQGEKNKYDKDIVYIKD
                     DYYSIELKTSSDPKYIFGNRSYAQPQDGITGKSKNGYYLTINFEKFMPDLKLRPEIKI
                     IRFGWLDHTDWIAQTAATGQQARLSPEAYRSKLKILYQK"
     gene            complement(32490..32705)
                     /locus_tag="ACJJDE_000330"
     CDS             complement(32490..32705)
                     /locus_tag="ACJJDE_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7540322.1"
                     /translation="MENELVEFGKRVKHYRLLNGWSQEELAEKVGLHRTYIGSVERGE
                     RNISLLNISLLAKSFSINISELVEGIK"
     gene            complement(33137..33604)
                     /locus_tag="ACJJDE_000331"
                     /pseudo
     CDS             complement(33137..33604)
                     /locus_tag="ACJJDE_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            33836..34048
                     /locus_tag="ACJJDE_000332"
     CDS             33836..34048
                     /locus_tag="ACJJDE_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SWIM zinc finger domain-containing protein"
                     /protein_id="HGG7540323.1"
                     /translation="MPHIHPLHLFPPHIAERGLLYFQQGKVGAVQKTSTGRYRAEVCG
                     LENYWVWLKLDSDLYIKDESCDCPYV"
     gene            34232..34500
                     /locus_tag="ACJJDE_000333"
                     /pseudo
     CDS             34232..34500
                     /locus_tag="ACJJDE_000333"
                     /inference="COORDINATES: protein motif:HMM:NF017953.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase"
     gene            complement(34590..35039)
                     /locus_tag="ACJJDE_000334"
     CDS             complement(34590..35039)
                     /locus_tag="ACJJDE_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7540324.1"
                     /translation="MTDNRGFTLVELISVVLILSVLALIVYPSYRNYVEKAKINAVRA
                     ALLENAHFMEKFYLQNGRFKQTSTKWPSLPIKEAEGFCIRLNGIARGALDSKFMLKAV
                     AIDKDKNPFIIKMNENLVTFICKKSASSCSDGLDYFKGNDKDCKLLK"
BASE COUNT         8868 a        10391 c         8401 g         7508 t
ORIGIN      
        1 ttatcattta tcctttctaa agccgttccg gtttgtccga ccggcggctt tgccccaata
       61 tccccatttt ggagacacct atgttacgtt tgactgcttt agccgtatgc accgccctcg
      121 ctttgggcgc gtgttcgccg caaaattccg actctgcccc acaagccaaa gaacaggcgg
      181 tttccgccgc acaaaccgaa ggcgcgtccg ttaccgtcaa aaccgcgcgc ggcgacgttc
      241 aaataccgca aaaccccgaa cgcatcgccg tttacgattt gggtatgctc gacaccttga
      301 gcaaactggg cgtgaaaacc ggtttgtccg tcgataaaaa ccgcctgccg tatttagagg
      361 aatatttcaa aacgacaaaa cctgccggca cgctgttcga gccggattac gaaacgctca
      421 atgcctacaa gccgcagctc atcatcatcg gcagccgcgc agccaaagcg tttgacaaat
      481 tgaacgaaat cgcgccgacc atcgaaatga ccgccgatac cgccaacctc aaagaaagct
      541 caaaagagcg tatcgacgcg ctggcgcaaa tcttcggcaa acaggcggaa gccgacaagc
      601 tgaaggcgga aatcgacgcg tcttttgaag ccgcgaaaac tgccgcgcaa ggcaaaggca
      661 aaggtttggt gattttggtc aatggcggca agatgtccgc cttcggctcg tcttcacgac
      721 tgggcggctg gctgcacaaa gacatcggcg ttcccgctgt tgacgaagcc atcaaagaag
      781 gcagccacgg tcagcctatc agctttgaat acctgaaaga gaaaaatccc gactggctgt
      841 tcgtccttga ccgcagcgcg gccatcggcg aagagggtca ggcggcgaaa gacgtgttgg
      901 ataatccgct ggttgccgaa acaaccgctt ggaaaaaaga acaggtggtt tacctcgttc
      961 ccgaaactta tttggcagcc ggtggcgcgc aagagctgct gaatgcaagc aaacaggttg
     1021 cggatgcgtt caacgcggca aaataatgaa acggcggcat tcgatgccgt ctgaaacacg
     1081 gatgcaaacc gcttcctgtg tttcagacgg cattgcccga tacgggcgtt atcgcgggaa
     1141 tggcggcaag cgtttttatt ggaacttgcc ctatcctctg cccgatacgg aggcttcaaa
     1201 caaggctttc cgctccgacg gttcggactg ccttgtttga atcttctacg ccttaacgct
     1261 tttcctttct gtttatgact gccaaacctt tttccctcaa cctgaccaac ctcctgctgc
     1321 tggcggtatt gtttgccgtc agcctgtcgg tcggcgttgc cgatttccgc tggtcggatg
     1381 tgttttcgct gtccgacagc cagcaggtta tgttcatcag ccgcctgccg cgcacgtttg
     1441 cgattgtgct gacgggcgcg tcgatggcgg tggcggggat gattatgcag attctgatgc
     1501 gtaaccgttt tgtcgagcct tctatggcgg gcgcgggtca gagtgcggct ttgggtttgc
     1561 ttctgatgtc cctgctgctg cctgccgcgc cgctgccggt caaaatgtcg gttgccgccg
     1621 ttgccgcgtt aatcgggatg ttggtgttta tgatgcttat ccgccgcctg ccgccgacgg
     1681 cgcaactgat ggtgcctttg gtcgggatta ttttcggcgg cgtggttgag gcggtggcca
     1741 cctttattgc gtatgaaaac gaaatgctgc aaatgctggg cgtgtggcaa cagggcgatt
     1801 tttcgagcgt gctgctgggg cggtacgagc tgctttggat tacgggcggt ttggcggtgt
     1861 ttgcctatct gattgccgac cggctgacga ttttggggct gggcgaaacg gtcagcgtga
     1921 atttgggttt gaaccggacg gcggtgttgt ggtcggggct gattattgtg gctttgatta
     1981 cgtcgctggt tatcgttacg gtcggcaata ttccgtttgt cgggctggtc gtgccgaaca
     2041 tcatcagccg cctgataggc gacaggctgc gccaaagcct gcctgcggtg gccttgttgg
     2101 gcgcgtcttt ggttttattg tgcgacatta tcggacgcgt gattgtgttt ccgtttgaaa
     2161 ttccggtatc gaccgtcttc ggcgtattgg gtacggcgtt gtttttatgg cttttgttaa
     2221 ggaaacctgc tcatgccgtc tgaaaaaaat atcggtttta tggcaggaag cagccgtccg
     2281 ttgtgggttg cctttgcgct gttgctggtt tcctgcgtcc tgtttttaac gctcaacgtc
     2341 aaaggcgatt gggactttgt actgcacctg cgtctgacca aacttgccgc gctgctgatg
     2401 gtcgcctatg cggtcggcgt gtccacgcaa ctcttccaaa cgctgaccaa caatccgatt
     2461 ctgacccctt cgattttggg tttcgattcg ctgtatgtgt ttttgcagac cttgctggtg
     2521 tttacgttcg gcggcgtggg ctatacgtcc ctgcctgcgg tcggcaagtt cggctttgaa
     2581 ttggtcgtta tgatgggcgg ctcgctgctg ttgttctaca cgctcgtcaa acaaggcggg
     2641 cgcgatttgt cgcgcatgat tttaatcggc gtgattttcg ggattttgtt ccgcagcctg
     2701 tcgtcgctgc tttcgcgcat gatcgacccc gaagaattta tggcggcgca ggcgaatatg
     2761 tttgccggat tcaataccgt ccacagcgag cttttgggca taggcgcgct gattctgctc
     2821 gtcagcgcgg cggtcgtttg gcgcgaacgc taccgcttgg acgtacacct tttggggcgc
     2881 gaccaagccg tcaatttggg catcagctac acgcgcaaca ccttatggat actgctttgg
     2941 attgccgcat tggtggcgac ggcgaccgcc gttgtcggcc cggtaagctt tttcgggctt
     3001 ctcgccgcct cgcttgccaa ccacttttcc ccgtccgtgc gccattccgt ccgcctgccg
     3061 atgacggttt gtgtcggcgg catcctcctg gtcggcggac aaaccgtatt cgaacacttc
     3121 ttgggcatga aggcggtatt aagcgtggtg gtcgaatttg cgggcggact cgttttcctc
     3181 tatctcgttt taaaacacaa aaaatgacgg atgccgtctg aacggcagcc tggctcgaaa
     3241 ggacaaacca tatgacgcaa gaacgtttcc catcattctt caaccaagcc ccgaccatca
     3301 ccgtcaggga cgcgcttgct gaattcctcg gcgcggccga aaatggcatc ctcacttacc
     3361 gctacgccga tgccgtgcgc ctgtgcggcc actcctgccc gaccgtcgcc ggcgcgtacc
     3421 tgatggttat caaaggtctg aaagcccttt acggcgaaga gctgcccgaa cgcggcggca
     3481 tcgaagccgc catgcaggga gcgcgcgacg aaggcacggt cggcgtaacc gcgtccgtcg
     3541 tccaactcct caccggcgca gccccggaaa ccggcttcgg aggcatcgga atgcagggac
     3601 gcttcgcccg ccgtaacctc ttatcctttg gtgcaggcga aatcaacggc acactgaccc
     3661 tgcgccgcaa agacaacggc aaaaccgtcg ccgtcagcct caacgccgcc ctacaaccct
     3721 ttgcacccga aatgcgcgaa cttatgccca aagccgtcgg cggcagcgca agcgcagaag
     3781 aactcgaacg cttcggacaa ctctggcagg cacgcgttaa agcatttttg accgaatcgg
     3841 cggacgaccc gcagttcgtc atcgtccgcg aagtgtgagc gttcagacgg cattccgaat
     3901 ttcaaatgcc gtctgaaccc ccgccaaaca acaacaaacc tacgcccgac aagcatccgc
     3961 catgattacc atccgcaacg tcagctaccg catcggcaca cgccccatcc tcgacaacgt
     4021 cagcctcgac atccccgaag gcggcattac cgccctcgtc ggccccaacg gtgcgggcaa
     4081 atccaccctg ttttccttta tggcgcggct gcgcccgctt gaaagcggca gcatcgccta
     4141 ccgcggcaaa aaccttgcct gcacccccac cgccgaactc gccaaaaccc tgtccatcct
     4201 cacccaagaa aacagcatca tgagccgcat caccgtgcgc gacctgctca tgttcggccg
     4261 ctatccctac catcaaggca gaccgactgc cgaatgccgc cgtatcgtta acggtgcaat
     4321 cgaagaattc cacctgcaag acttcgccga ccgctacctg accgagcttt ccggcggaca
     4381 acgccaacgc gccatgattg ccatggtgtt ctgccagcgc accgactacg ttttgctgga
     4441 cgaaccgctg aacaacctcg acatgtatca tgcccgctcc ctcatgcaaa tcctgcgccg
     4501 gctgaccgac gaacacaagc gcaccaccgt cgtcgtatta cacgacatca accaggccgc
     4561 cgcctacgcc gaccacgtcg tcgccatgaa aaacggccaa gtcgccatgc agggcaagcc
     4621 cgacgacatt ttcaccgccg caaacatcaa aaccctgttc gatatggatg tgtccgtcct
     4681 cgaccaccaa agcaaaaaac tcatcgtcca ccatatctga agctcaaaaa gaaaatgccg
     4741 tctgaaaacc tttcagacgg catttccatt ccaaacgctc aaaccgccgc gtccgcacgt
     4801 tcgcccgtgc ggatacggat tgcctcctcg accggcagca caaaaatctt gccgtcgccg
     4861 atttttcccg aacgcgccac ctcgacaatc acgtcaatcg cgcgttccac agcatcatcc
     4921 gccaacacca gctcgatttt gactttgggc aggaaatcga cggcgtattc cgcaccgcga
     4981 tagatttccg tatgcccctt ctgcctgccg aaccctttga cctcgctgac ggtcatgccc
     5041 gtaatgccga tttccgtcaa cgcctcgcgc acgtcgtcga gtttgaacgg tttgacaatc
     5101 gcctcgattt ttttcatcac attctccatt aattaacgta aacaaacgac aaatatagca
     5161 gaaaccgccg gcaaacgata aacggtactg ttcgcccggc gatgcggcga tttgccggaa
     5221 accgtcattc ccgcgcaggc gggaatcccg atctctgcat ttcagcaata tttaaaggtt
     5281 tctgtaaatc caaacttcca tattcctaac cgtacggaaa cgacggcatt tgatctaaaa
     5341 acatacggaa gcagttgccc gcccctctac ttcctgcaat tatccgcata cccggctttg
     5401 ggtaaaaatc agaaaaacag ataaaaccct tattccttaa tatcttcaga cggcacctgt
     5461 attttcccca actgtatgcc gtctgaagat tgtcaacatt ttaagccaaa atatccaagc
     5521 aatacaaacc tgtccggcgt ataatccctc tttttcccaa ccgcatttga gagccgaatc
     5581 catgtctgtc gttttgccct tgcgcggcgt taccgccctt tccgatttcc gtgtcgaaaa
     5641 actcttgcaa aaagccgccg cactcggact gcccgaagtc aaattaagca gcgaattttg
     5701 gtatttcgcc ggcagcgaga aagcacttga tgccgcgact gtcgaaaaac tgcaagcctt
     5761 gttggcggcg caaagcgttg aacaaacgcc aaaagcgcgc gagggcttgc atttgttttt
     5821 ggtcacgccc cgtttgggta cgatttcgcc gtgggcttcc aaggcgacca atatcgcgga
     5881 aaactgcggt ttggcaggca tagagcgcat cgagcgcggt atggcggtgt ggctggaagg
     5941 cgcgcttacc gacaggcaaa aacaacaatg ggcggctttg ctgcacgacc gcatgaccga
     6001 atccgtattg cccgattttc agacggcatc caaattattc caccatctcg aatccgaaac
     6061 cttctccacc gtcgatgttt tgggcggcgg taaagaggct ttggtcaaag ccaataccga
     6121 aatgggtttg gcactctccg ccgacgaaat cgattatctg gttgaaaact atcaggcttt
     6181 gcagcgcaat ccgtccgatg tggagctgat gatgttcgcg caggcaaaca gcgaacactg
     6241 ccgccacaaa atcttcaacg ccgatttcat cctcaacggc gaaaaacaac cgaaatccct
     6301 gttcggcatg atacgcgaca cgcacaacgc gcatcccgaa ggtacggtcg tcgcctataa
     6361 agacaattcg tccgtgatcg aaggcgcgaa aatcgagcgt ttctatccga atgcggcgga
     6421 aaaccaaggc taccgtttcc acgaagaaga cacgcatatc atcatgaaag tggaaacgca
     6481 caaccacccg accgccatcg cgccgtttgc gggcgcggcg acgggtgcgg gcggcgaaat
     6541 ccgcgacgaa ggcgcgacgg gcaaaggttc gcgcccgaaa gcaggcttga ccggctttac
     6601 cgtctccaac ctcaacatcc ccgacctcaa acagccttgg gaacaagcct acggcaaacc
     6661 cgaccatatt gcttcccctt tagacatcat gatcgaaggc cccatcggtg gcgcggcgtt
     6721 caacaacgaa ttcggacgcc ccaacctctt gggctacttc cgcacctttg aagaaaaatt
     6781 tgacggtcag gttcgcggct accacaaacc gattatgatt gcgggcggct tgggcagcat
     6841 tcaggcgcag cagacgcata aagacgaaat ccccgaaggc gcgttgctga tccaactggg
     6901 cggcccgggt atgcttatcg gcttgggcgg cggcgcggct tcttcgatgg ataccggtac
     6961 aaacgacgct tctttagact tcaactccgt gcaacgcggc aaccccgaaa tcgaacgccg
     7021 cgcgcaggaa gtcatcgacc gctgctggca gctcggcgac aaaaacccga ttatctccat
     7081 ccacgacgtg ggcgcaggag gtttgtccaa cgccttcccc gaactcgtca acgatgccgg
     7141 acgcggcgcg gtattcaagt tgcgcgaagt gccgttggaa gaacacggtt taacgccttt
     7201 gcaaatctgg tgcaacgaat cgcaagagcg ttatgtgttg tcgattttgg aaaaagattt
     7261 ggatgccttc cgcgccatct gcgaacgcga acgctgcccg tttgccgtag tcggcacggc
     7321 gaccggcgac ggccatttga aagtacgcga cgatttgttc tccaacaacc ctgtcgattt
     7381 gccgttgaac gttttgctcg gcaaaccgcc caaaaccacg cgcaccgaca aaacggttac
     7441 gccgtatgcg accgaaggga atccctttgg gaaaaaaccg tttaatgccg gcgatatcga
     7501 cattaccgaa gccgcctacc gcgttctgcg cctgcctgcc gtagcggcta aaaacttcct
     7561 gattaccatc ggcgaccgca gcgtcggcgg catgacccac cgcgaccaaa tggtcggcaa
     7621 ataccaaacc cccgtagccg actgcgccgt gaccatgatg ggcttcaaca cctatcgcgg
     7681 cgaagcgatg tctatgggcg aaaaaccggc cgtcgccctg tttgacgcgc ctgcttcggg
     7741 cagaatgtgt atcggcgaag ccatcaccaa catcgcagcg gtcaacatcg gcgacatcgg
     7801 caatatcaaa ctttctgcca actggatggc ggcgtgcggc aacgaaggcg aagacgaaaa
     7861 actctaccgc accgtcgaag cggtttccaa agcctgtcag gcattggatt tgagcatccc
     7921 cgtgggcaaa gacagcctgt cgatgaaaac cgtttggcag gatggcgcgg acaagaaatc
     7981 cgtcgtctcg ccattgagcc tgattatctc cgcgttcgcg ccggtggaag acgtacgcaa
     8041 aaccgttacg cccgaactga aaaacgtcga agacagcgta ttgctgttta tcgatttggg
     8101 cttcggcaaa gcgcgtatgg gcggctcggc gtttggtcag gtgtacaaca atatgagcgg
     8161 cgacgcgccc gatttggacg atacaagtcg tctgaaagcg ttttacaacg tgattcagca
     8221 gcttgtcgcc gaagacaaac tcttggcgta tcacgaccgc agcgacggcg gtttgtttgc
     8281 cgttttggta gaaatggcgt ttgcggggcg gtgcggcttg gatatagatt taaatttatt
     8341 gcttgcacaa acatttatta ccaaccatac cgctctgtct caatcattgc ggactgaaga
     8401 ggtaaaagcg ttggctgaat ggcaagaaac cattgcccgc acattattta atgaagagtt
     8461 gggtgctgtt atccaagtta gaaaacaaga tgttgccgat attatcaatt tattctatca
     8521 acaacagctg catcataatg tctttgaaat cggtacgtta actgatgaga acacgttaat
     8581 catccgcgac gggcaaacgc accttatttc tgacaaccta atcaaactgc aacaaacctg
     8641 gcaagaaacc agccatcaaa tccaacgcct gcgcgacaac cctgcctgcg ccgacagcga
     8701 gtttgccctg attggcgaca acgaacgcag cgcattgttt gccgacgtga agttcgacgt
     8761 gaacgaagac atcgccgcgc cgtttatcaa cagcggcgcg aaacccaaaa tcgccatcct
     8821 gcgcgaacag ggcgtaaacg ggcaaatcga aatggccgcc gcgttcactc gcgccggttt
     8881 cgatgcctac gacgtgcata tgtccgacct gatggcaggc cgcttccgcc ttgccgactt
     8941 caaaatgctg gcggcgtgcg gcggcttcag ctacggcgac gtactcggcg cgggcgaagg
     9001 ctgggcgaaa tccatcctgt tccaccctgc cttgcgcgac caatttgccg ccttctttgc
     9061 cgatccggac acgctgacat tgggcgtgtg caacggctgc cagatggtca gcaacctcgc
     9121 cgagattatc ccgggtgcag aggcatggcc taaattcaaa cgcaacctga gcgaacagtt
     9181 tgaagcacgc ctgagcatgg ttcacgttcc gaaatcagcg tcgctgattc tgaacgaaat
     9241 gcaaggctcc agcctgcctg tcgtggtcag ccacggcgaa ggccgcgccg acttcgcgct
     9301 tcacggcggc aatatttccg ccgatttggg catcgcgctg caatatgtgg acggtcaaaa
     9361 ccaggttacc caaacctatc cgctcaaccc caacggctcg ccgcaaggca tcgccggcat
     9421 taccaacgcc gacggccgcg tgaccatcat gatgccccac cccgaacgcg tgtaccgcgc
     9481 cgcgcaaatg agctggaaac cggaaggctg gacggaactg tccggctggt accgcctctt
     9541 tgccggcgca cgtaaagcct tgggctaacc gccctactca aaccaatgcc gtctgaagaa
     9601 tatttcagac ggcgttccgg cataccatcc tttaaacggt atccgtccac cgaggaacac
     9661 tcatgaaaat cacccccgtc aaagccctaa ccgacaacta catctggatg atacagcacg
     9721 gcaaccatgc cgtctgcgtc gacccttccg aaccctcgcc cgtcttagaa ttcctcgtcc
     9781 gcaaccgcct catgcttgcc caaacatggg taactcaccc ccaccccgac cacgagggcg
     9841 gtgcggcggc actctggcgc ggctacatgg aatcgcccgt ttacggcgaa tccgacatcg
     9901 aagcagcaac ccacaccgta accgccggca cccaattcac cttcggcgac ggacaggtta
     9961 ccgtttgggc aacacccggc cacacagacc gccacaccag ctaccttctc gaaacttcag
    10021 acggcataca cgtcttttgc ggcgacaccc ttttttccgc cggctgcgga cgcgtgttta
    10081 ccggcacaat cgaacagctt tacgacagct tccaacgctt caaccgcctg cctgaaaaca
    10141 ccctgttcta cccggcacac gaatacaccg ccgccaacct gcgtttcgcc gcccatatcg
    10201 agccggacaa cgccgacatt cagacggcac tgaaagcggc ggcgcatacg cctaccctgc
    10261 ccgttaccct cgcgcacgaa cgccgcgtca atccgttttt gcgcgtcgac ctgccgcacg
    10321 tcagagaccg cgccgaggca ttgagcggga aaacgttaaa cagcagcctc gatacctttg
    10381 tcgcgctgcg tgaacttaaa aaccaatacc ggacgaaata aaacaatggg aaaacgcagc
    10441 cattcctagg atttttatta aaatcttaaa taaaatcata caatcatcgc caatagacga
    10501 aaggacaccg ttgccttata atcaaacaaa aacaaaatat ataatatagt ggattgaatt
    10561 taaatcagga caaggcgacg aagccgcaga tagtacggca aggcgaggca acgctgtact
    10621 ggtttttgtt aatccactat attgttaatc cactatataa atccagcaca aaacgggatc
    10681 ggtgattctt gtccgcaaga atcgttgatt ttctctatta cacggataat catcatgcgc
    10741 ttcacacaca ccaccccatt ttgttccgta ttgtccaccc tcggtctttt tgccgtttcc
    10801 cctgcttact catccattgt ccgcaacgat gtcgattacc aatattttcg cgactttgcc
    10861 gaaaataaag gcgcgttcgc cgtaggtgca agcaatattt ccatccaaga caagcaaggc
    10921 aaaatattag gcagggttct caacggcatc cccatgcccg acttccgagt cagcaaccgg
    10981 caaaccgcca tcgccaccct gattcacccc caatacgtca acagtgtcaa acacaacgtc
    11041 ggctacggtt ccatacaatt cggcaacgac acccaaaatc cagaagaaca agcctatacc
    11101 taccgcctcg tatcacgcaa cccgcacccg gactacgact accaccttcc ccgcctcaac
    11161 aaactggtta ccgaaatctc acctgccgca ctcagcagcg tacccttgct tggaaacggc
    11221 cagccaaagg ccaatgccta cctcgatacc gaccgcttcc catactttgt acgactcggc
    11281 tcaggcacgc aacaagtccg caaagcagac ggcacgcgta cacgaaccgc cccggcatac
    11341 caatacctga ccggcggcac gccgctgaaa gtattggggt tccaaaacca cggcttactc
    11401 gtcggcggca gcctgaccga ccaacccctt aacacctacg caatcgccgg agacagcggt
    11461 tcccccctgt ttgccttcga caagcatgaa aaccgctggg tgcttgcggg cgtactcagc
    11521 acctacgccg gcttcgataa cttcttcaac aaatacatcg tcacgcaacc cgaattcatc
    11581 cgttccacca tccgccaata cgaaacccgg ctggatgtcg ggctgaccac caacgaactc
    11641 atatggcgcg acaacggtaa tggcgacagc accctgcaag ggctcaacga acgcatcacc
    11701 ctgcccattg caaacccttc gcttgcccca caaaacgaca gcaggcacat gccgtctgaa
    11761 gatgccggca aaacgctcat cctatccagc aggttcgaca acaaaacact gatgctggca
    11821 gacaatatca accaaggcgc aggcgcattg cagttcgaca gcaacttcac cgtcgtcggt
    11881 aaaaaccaca catggcaagg tgcaggcgtt atcgtagccg acggcaaacg cgtcttctgg
    11941 caagtcagca accccaaagg cgaccggctc tccaaactgg gcgcaggcac gcttatcgcc
    12001 aacggacaag gcatcaacca gggcgacatc agcatcgggg aaggcactgt cgtactcgcc
    12061 caaaaagctg cttcagacgg cagcaaacaa gcattcaacc aagtcggcat caccagcggc
    12121 aggggcacgg ccgtcctcgc cgacagccag caaatcaaac ccgaaaacct ctatttcggc
    12181 ttcaggggcg gacggctcga cctcaacggc aacaaccttg cctttaccca tatccgccat
    12241 gcggacggcg gcgcgcaaat cgtcaatcac aaccctgacc aagccgcgac actgacgctg
    12301 accggcaacc ccgtcctcag tcccgagcat gtcgagtggg tgcaatgggg caaccgtccg
    12361 caaggcaacg cggcggttta cgaatacatc aacccgcacc gcaaccgtcg gaccgactac
    12421 ttcatactca aacccggcgg caacccgcgc gaatttttcc cgttaaatat ggaaaactca
    12481 acaagctggc aatttatcgg caacaacagg caacaggccg ccaaacaagt cgcccaagcc
    12541 gaaaatgccc gccccgacct aattaccttc ggcggatact tgggtgagaa cgcgcaaacg
    12601 ggcaaagccg caccgagtta cagcaaaacc aatatcgaat gggtgaatgg tccaaacacc
    12661 ccacacaagc cctcgcccta tacgaatacg ccaacccgca caggggcagg cgtaccgacg
    12721 attaccgcct caaagaaggc ggcaaccccg gcgcctactt cccatggaat gcctacagca
    12781 cccaagactg ggaatttctc ggacatgacc ggcgaagcag ccatagaaaa aacccgccat
    12841 atcgcaaatg ccgccgtata cggccggccc gaataccgtt acaacggcgc actcaacctg
    12901 cactatcgtc ccaaacgcac cgacagcacg ctgttgctca acggcggcat gaaccttaac
    12961 ggggaagtct tgattgaggg cggcaatatg attgtgtcag gcaggcccgt accccatgcc
    13021 tacgaccacc aggccaaacg cgaacccgtt cttgaaaacg aatggaccga cggcagcttc
    13081 aaggctgcac ggttcaccct gcgaaaccat gcccgactga cggcagggcg caataccgcg
    13141 catctggacg gcgacataac cgcatacgat ctgtccggca tcgacctcgg ctttatccaa
    13201 ggcaaaacac cggaatgcta ccgctcctac catagcggca gcacccactg cacacccaac
    13261 gccgttttaa aagccgaaaa ctatcgtgca ctacctgcaa cgcaagtacg cggcgacatt
    13321 acccttaacg accgttcaga gctccgcctg ggcaaagcac acctgtacgg cagcatccgt
    13381 gccggcaaag acaccgcagt ccgcatggaa gcagacagca actggacact ttcccagtcc
    13441 agccacaccg gcgcactgac gcttgacggc gcacaaatta ccctgaaccc cgatttcgcc
    13501 aataatacac acaacaaccg cttcaacaca ctgaccgtca acggcacact tgacgggttc
    13561 ggcacattcc gattcctgac cggcatcgtc cgaaaacaaa atgccccccc cctcaaactg
    13621 gaaggggaca gccgcggcgc attccaaatc cacgtcaaaa acaccggaca agaacctcaa
    13681 acaaccgaat cgcttgcact tgtgagcctc aatccgaaac acagccacca agcccgattc
    13741 accctccaaa acggctatgc cgatttgggt gcctaccgct acatcctccg caaaaacaac
    13801 aacggataca gcctgtacaa cccgctcaaa gaggccgaac ttcaaattga agccacgcgt
    13861 gcggaacatg agcgcaacca acaggcatac aaccaattac aggcaaccga catcagcaga
    13921 caggttcaac atgactctga cgcgaccagg caggcactac aggcctggca gaacagtcaa
    13981 accgaacttg cccgcatcga cagccaagtc caatatctgt ccgcccaatt gaaacagaca
    14041 gacccgctga ccggcattct gacgcgtgcc caaaacctgt gtgccgcaca aggatacagt
    14101 gtcgatatct gccgtcaggt tgccaaagcc gccgacacga acgacctgac actcttcgaa
    14161 accgaactgg atacgtatat agaacgtgta gaaatggccg aatccgaact tgacaaagca
    14221 cggcaaggcg gcgatgcgca agccgtcgaa acagcccggc acgcctacct gaacgcactc
    14281 aaccgtctgt cccgacaaat ccacagtttg aaaaccggcg ttgccggcat ccgtatgccg
    14341 aacctggccg aactgatcag ccggtcggcc aacaccgccg tttccgaaca ggccgcctac
    14401 aataccggcc ggcaacaggc gggacgccgc atcgaccgcc accttaccga tccgcagcag
    14461 caaaacatct ggctggaaac cggtacgcaa caaaccgact accatagcgg cacacaccgt
    14521 ccctaccaac aaactaccaa ctatgcacat atcagcatcc aaaccggcat caccgaccgt
    14581 ctcagtgtcg gtacaatttt aaccgatgag cgcacaaaca accgttttga tgaaggcgta
    14641 tccgcccgaa accgcagcaa cggcgcacat ctgttcgtca aaggggaaaa cggcgcactc
    14701 tttgccgcgg cagatttagg ctacagcaac agccgtaccc gatttaccga ttatgacggg
    14761 gctgccgtcc gccgccacgc atgggatgca ggcatcaaca ccggcatcaa aatcgatacc
    14821 ggcatcaacc tcagacccta tgccggcatc cgtataaacc gcagcaacgg caaccggtac
    14881 gtactcgacg gcgcagagat aaacagcccg gcgcaaatcc aaaccacatg gcatgccggc
    14941 atccgtctcg ataaaaccgt cgaactgggt caagccaagc tgacccccgc cttcagcagc
    15001 gattactacg atacccgcca aaacagcggt tccgccctca gcgtcaacga ccgtacctta
    15061 ctgcagcaag ccgcccacgg cacactgcat accctgcaaa tcgacgccgg atacaaaggc
    15121 tggaacgcca aacttcatgc cgcttacggc aaagacagca acaccgcccg ccacaaacaa
    15181 gcaggaatca aaataggcta caactggtaa caagccgata aaaatgccgt ctggaacccg
    15241 cgtttcagac ggcatttgcg ttaaaaatag taaaccgttc caaaagggag tagaatagtg
    15301 ccgtttccaa ccctgcgcct gtaccgtcag gcttttatta tggaccttcc cagttcgttt
    15361 ttactgaacg ccccttccga ttccaaacga caataaccat cccgccggaa tgcctccccg
    15421 cacacggcgg gcggagcatt tatgagcatc gaaccaaccc ctccgaacct tgaaaacgac
    15481 ggtatcgaaa acgatgtaga acgcgtttcc gccgatttcg accgtgtcca ctccctctgc
    15541 gaaattctcg aacctgcttt tgaacaaatc gaaaacggca caccgcttga agacgcgccg
    15601 ctgcgcgaca agctgaccga gctgaccgtt ctcttgagcg agctgcaccc tgccgacgtg
    15661 gcggcggtat tggaatcgct accgccgcgc gaacgcaata tcgtctggat tctggtcaaa
    15721 ccggaagacg acggcgaagt attgctggaa gtatccgacg cggtgcgcga aacgctgatc
    15781 gagtcgatgg acaaagacga attgttggca gcggtcgatg atttggacgc ggacgaattg
    15841 gcggaactgg cagacgattt gccgcaccaa gtggtttacg aagcgctaca aacccgcgat
    15901 gaggaagaac gcgcccaagt caaagcggca atgtcctacg aagacaacca agtcggtgcg
    15961 attatggact tcgagttggt cagcatccgc gccgatgtcg cctgtgaagt ggtgctgcgc
    16021 tatctgcgcc gcttcgacag cctgcccgac cataccgaca agatttttgt ggtcgatgaa
    16081 aacgacgtac tgcaaggcgt gctgcccatc cgcaaacttt tggtcgccga tcccgaagat
    16141 ttggtggaaa acgtgatggc gaaagatgtc gtgcgtttcc gcgccgaaga cgacgtggaa
    16201 gaagcggcgc aggcgtttga acgctacgac ttggtaactg cgccggttgt cgatgaaaac
    16261 aaaaagctca tcggtaggat taccgttgac gagatggtgg acgtcatccg tgaagaatcc
    16321 gaagcggata tgttgaacat ggcaggtttg caggaagagg aagacctgtt cgcccccgtc
    16381 ttggattccg tcaaaaaccg ctggatgtgg ctcgccgtca acctctgcac cgccttcctc
    16441 gccagccgcg tcatcggcgc gtttgaaggc agtatcgaaa aaatcgttgc actcgccgcg
    16501 ctgatgccca tcgtcgccgg tatcggcggc aactcgggca accagacgat taccatgatt
    16561 gtccgcgcca tggcgatggg gcagttgacg ggaatgcagg cggggcgctt gttgaaaaaa
    16621 gaagtcggcg ttgccctagt caacggcatt atctggggaa ccgtcatggg cgcggtttca
    16681 tggctgctct acggcagcct cggcatcggg ctggttatga ttgccgcgat gacgctcaac
    16741 ctcctgctgg cggcaaccgt cggcgtatta attcccgtgg taatggaaaa gttcggacgc
    16801 gatcccgcac tgggcagctc ggtgctgatt accgccgtta ccgactccgg cggcttcctg
    16861 attttcttgg ggctcgccac cctattcctg ctttaaatgc cgtctgaacc cgcgcaaaaa
    16921 tgccgtctga agcggaagct gcttcagacg gcatttgact atttatcctt gttgcacaag
    16981 attattggac ggtatgccgg ggcagccctt tggcaacgcc gaccacatcc tccccgaaca
    17041 gcgcgttgac atcggtttcg tcaaacacat atttgctgtg gcagaaatcg caatcgactt
    17101 cgatgctgcc ttgttccgcc accacgccgc cgacttcttc cccgcccagc atcaacagca
    17161 tatcgctgac tttgccgcgc gaacaggtgc atgaaaattc aaacgtttcc ggctcgaaca
    17221 cgcgcggcgg cgtttcgtgg aacaggcggt ataaaacgtg ttgcgcatcc aattctgcca
    17281 gctcctccgc cgtcagcgtg cgcgccagcg tactgacgtg ttcccatgcc tcttcatcca
    17341 acacctcttc aggcagacgc tgcaccagca gaccgcccgc cgcttcatcg cttgcagaca
    17401 ggacgatgtg cgtatcaagc tgttcggaac gtttcatata gttcatcaac atttgcgcga
    17461 taccgtcgcc ttccaaaggc actacgccct gccagggttc gccgtctttg ggctgcagcg
    17521 tcaatacgaa cacgccgttg ccgcccaaaa ggtcgccgag gctttcgtca tcggctattt
    17581 ctgccgcctc gtcccaccgc gcggtcgcac ggacggtacg gtcggaagtc gcttccgcaa
    17641 ccagcatttt cagccgcccc tgcccctgaa cctgcacaat cagcgtgcct tcgtttttga
    17701 ggttgcccga cagcagaaca ccggcagcca acagctcgcc caaggcgcgg cggatggcgg
    17761 cgggatagtt tttctgtttt acaatgtgct gccacacgtt ttccagacgg acgtgcagcc
    17821 cgcgcacggg catatcgtcg aagataaagc gggtacgcac atcggcgcgg ttgatggcgg
    17881 tttgattcat gattttctct gactgattgt tcggatggcg gctatatggt tgcggtcggc
    17941 gcgaaaacaa gacggacggc ggatgcgctt cccaaattat caataaatta tataaaaatc
    18001 aacatattaa ctcaatctaa caagccgttt tttgccaaac agccgttttt ttatatacaa
    18061 tcaacaagat attttcgact gatacagcat aacatcgcac ggcggcacga tgcctcctgc
    18121 gcggaaacac cgatatggat tcttttttca aaccggcagt ttgggcggtt ttgtggctga
    18181 tgtttgccgt ccgccccgcc cttgccgacg agttgaccaa cctgctcagc agccgcgagc
    18241 agattctcag acagtttgcc gaagacgaac agcccgtttt acccatcaac cgagcccccg
    18301 cccggcgggc gggcaatgcc gacgaactca tcggcagcgc gatggggctt aacgaacagc
    18361 ccgttttacc cgtcaaccga gtccccgccc ggcgggcggg caatgccgac gaactcatcg
    18421 gcaacgcgat ggggcttaac gaacagcccg ttttacccgt caaccgagcc cccgcccggc
    18481 gggcgggcaa tgccgacgaa ctcatcggca acgcgatggg acttttgggt attgcctacc
    18541 gctacggcgg cacatcggtt tctaccggtt ttgactgcag cggcttcatg cagcacatct
    18601 tcaaacgcgc catgggcatc aacctgccgc gcacgtcggc agaacaggca cggatgggta
    18661 cgccggttgc ccgaagcgaa ttgcagcccg gagatatggt gtttttccgc acgctcggcg
    18721 gcagccgcat ttcccatgtc ggactttata tcggcaacaa ccgcttcatc cacgcgccgc
    18781 gcacggggaa aaatatcgaa atcaccagcc tgagccacaa atattggagc ggcaaatacg
    18841 cgttcgcccg ccgggtcaag aaaaacgacc cgtcccgctt tctgaactga tttcccaagg
    18901 aatacgcaat gagtatgccc gaaataccca aatggtacga cgatgacgga cagatcgtgt
    18961 cctgtaccga aaagatcaaa gtgatgtccg aaaatatggc cgagctgtat cagacggcac
    19021 aagacgcgtt tgaagacgcg ctgctgatgg gttgcggcga acgtcagttg cgcgattacc
    19081 tgctcgcgct gattgaaggt ttggaaaatc cctaccgcaa agtctgaaca cgccccggtt
    19141 gctgcggcac ggtttatccg tgccgttttt gcgtttgtgc gcggcttcgg cttttcagac
    19201 ggcatatttg acgttatgat taaacagtta acaagattta tcacaacgcc gtcaaaagac
    19261 agacacacaa catgaacatc atccgcgcgc tcctcatcat cctcggctgc ctcgccgccg
    19321 gcgaaaccgc cgttttccta gcaggcatca aactgcccgg cagcatcgtc ggcatgggcg
    19381 tgctgtttgc gcttttgcag gcgggttggg tcaaaacgtc ttggctgcaa cagcttaccg
    19441 acgcgctgat ggcgaatctg acgctgtttc tcgtgccgcc ctgcgtggcg gtcatcagct
    19501 atttggattt gattgccgac gattggtttt cgatactggt ttccgcctcc gccagcactt
    19561 tgtgcgtact gctggttaca ggcaaggttc accgctggat acggagcatt atctgatgaa
    19621 cgaaatcctc aggcagccca gcgttctgct tttcctcacg cttgccgtgt acgcgcttgc
    19681 gattatcgtg cgcacgcgca cgggcaatat cttctgcaac cccgtactcg tcagcactat
    19741 cgtgctgatt gcctacctga aaatcctcga catcgattat gcggtgtacc acaacgccgc
    19801 gcagtttatc gatttctggc tcaagcccgc cgtcgtcgtg cttgccgtgc cgctctacca
    19861 aaaccgccgt aaaatcttca accaatggct gcccgtcatc gtttcacagc ttgcgggcag
    19921 cgttacgggc attgttacgg ggatgtattt tgccaaatgg ctgggcgcgg aacgcgaagt
    19981 cgtcctctcg ctcgcgtcca aatctgttac caaccccatc gccattgaaa ttacccgctc
    20041 catcggcggc attcccgcca ttaccgccgc caccgtcatc attgccggtc tggtcggaca
    20101 gattgccggt tacaaaatgc tgaagaacac agtcgtcatg ccctcgtccg tgggtatgtc
    20161 gctcggcacg gcttcgcacg cgatgggcat tgccgcctcg ctcgaacgca gccgccgcat
    20221 ggcggcatac gcggggctgg ggctgacgtt caacggcgta ctgaccgcgc tgattgcgcc
    20281 gctgcttatc cccgttttgg ggttctgaac ccgtttcaga cggcatttca gcccatgctg
    20341 tctgaacgcc gacacactcg caaggagaac cgttatggct gtcaacctga ctgaaaaaac
    20401 cgccgaacaa ctgcccgaca tcgacggcat tgccctctac accgcccaag caggcgtgaa
    20461 gaagcccggg cataccgacc tgacactgat tgccgtagcc gccggcagca ccgtcggtgc
    20521 agtcttcacg accaaccgtt tctgtgccgc gcccgtccac atcgccaaat cgcacctttt
    20581 cgacgaagac ggcgtgcgcg ccctcatcat caacacgggc aacgccaacg cgggtacggg
    20641 cgcacagggc agaatcgatg ctttggcagt gtgtgccgcc gccgcccggc aaatcggctg
    20701 caaaccgaac caagtgctgc ccttctccac cggcgtgatt ctcgaaccgc tgcccgcaga
    20761 caaaatcatc gccgcgctgc ccaaaatgca gcctgccttc tggaacgaag cggcacgcgc
    20821 catcatgacc accgacaccg tgcccaaagc cgcctcgcgc gaaggcaagg tcggcgacaa
    20881 acacaccgtc cgcgccacgg gcatcgccaa aggctcgggc atgattcatc ccaatatggc
    20941 gaccatgctc agtttcatcg ccaccgatgc caaagtttcc caacccgtcc tccaactgat
    21001 gacgcaggaa atcgccgacg aaaccttcaa caccatcacc gttgacggcg acaccagcac
    21061 caacgacagc ttcgtcatca tcgccaccgg caaaaacagc caaagcgaaa tcgacaacat
    21121 cgccgacccg cgttacgccc aactcaaaga attgttgtgc agcctcgcgc tcgaactcgc
    21181 ccaagccatc gtccgcgacg gcgaaggtgc gaccaagttc atcaccgtcc gcgtcgaaaa
    21241 cgccaaaacc cgcgacgaag cccgccaagc cgcctacgcc gtggcacgtt cgccgctggt
    21301 caaaaccgcc tttttcgcct ccgaccccaa cctcggcagg ctgctcgccg ccatcggtta
    21361 tgccggcgtt gccgacctcg ataccgacct cgtagaaatg tatctcgacg atattttggt
    21421 tgccgaacac ggtggacgcg ccgcaagcta caccgaagca caagggcagg cggtgatgtc
    21481 gaaggccgaa atcaccgtcc gcatcaagct gcatcgcgga caagccgccg ccaccgtcta
    21541 tacctgcgac ctgtcgcacg gatacgtttc catcaacgcc gactaccgtt cctgacccga
    21601 cacggcttca gacggcatac ataaaatgcc gtctgaaccg ccggacaaca taccatgacc
    21661 tccacattcc cccgccgcct cgcccgcaaa atccgccaaa cccgccgcct gtcgcgcaaa
    21721 agcatcgcct ttctgttcct tttggcaggt tcggcactcg tcgccctgac cgcgctgttt
    21781 tttgcccatc ttgccgattt tgcgctggaa ctgaacgcca aactggttca acaatacccg
    21841 tggttcgcgt gggtcgcgct tcctttgggt ttgccgctta ttgcgtggct cacacgcaaa
    21901 ttcgccccct tcaccgccgg cagcggcatc ccgcaggtca tcgcctcact gtcgctgccc
    21961 tacggcgcac agaaaacgcg gctgatccgc ctcgggcaga cgctgctgaa gattccgctg
    22021 acctttttgg gtatgctgtt cggcgcgtcc atcggacgcg aaggtccgtc cgtgcaggtc
    22081 ggcgcggcag tgatgggcgc gtggggcgcg tggtgcaaga aacacggctt ggcattcaaa
    22141 gggatgcagg aaaacgattt gatggcggcg ggcgcggcgg gcggtttggc agccgcgttc
    22201 aacgcgccgc tggcgggcgt gattttcgcc attgaggaac tcgggcgcgg catcatgttg
    22261 cgctgggaga ggcaaattct tttgggcgtg ctcgcctccg gtttcataca ggtcgccatt
    22321 cagggcaaca acccgtattt ttccggcttc aacggcggcg tattggaaca tatctttctg
    22381 tgggtcgcac tgtccggcct ggtttgcggc gcggcgggcg ggctgttcgg acgtttgctc
    22441 tatcgcggtg cggcggcatt tgcaccacgc aagatacgcg gcttcatccg caaccgtccg
    22501 ctgctgctgg cggcactgat ggggctgctg ctcgccctgc tcggcacgtt ctaccaaggc
    22561 aaaacctacg gcaccggcta ccacgaagcc gcccaagccc tgcacggcat ctatgaagcc
    22621 cccttcggac tcgccgccgc caaatggctc gccaccgtat tcagctattg ggcaggcgtt
    22681 ccgggcggca ttttcactcc ctcgctgacc ataggcgcgg ttttgggcga gcatatcgcc
    22741 gccatcgccg acatatcgca gggtgcaaac atcatcgtcc tcatctgcat ggcggcattt
    22801 ctggcgggcg cgacacaatc cccgattact tccgccgtcg tcgtcatgga aatgacgggc
    22861 ggacaaagcc tgctgttttg gatgctaatt gcctgcattt tcgcctcgca ggtttcgcgc
    22921 cagttttcgc cgcgtccgtt ctaccacgca tcgggaatgc gcttccgcca gcgcgtgctt
    22981 caggaaacca ccgcccaaac cggcaatgcg cccgcaagac cgcaaacagc aaacagcaaa
    23041 acgggaatgc cgtctgaaaa ttaaaacgcc cccgatcaaa cgccggcagc cgccttgatt
    23101 tgaataccgt tccgccgccg cttgaaattt cagcaacaat gccgtctgaa cgacagaatg
    23161 cggttttcag acggcatttc cacatcccga tattgcctaa acaaaaccga agcgtttgct
    23221 ataattctat tttttaccgc acacgcacca atcatgtttc ccgatttctc ccaaaccctc
    23281 tccaaagacc gccacttcct acgttccgcc ttcaaaaatc ccaacaaata cggcgggttg
    23341 tccaaagtcg aagaaaaata ccgaaaatcg cacgaaatct ttttgaaacg tttggcagcc
    23401 ttgcccaaac ccgaattcga caacaccctg cccgttcacg aaaaacttga cgaaatcaaa
    23461 aaaaccgttg ccgaacatca ggtaacgatt atttgcggcg aaaccggttc gggcaagacc
    23521 actcagttgc ccaagatttg tctggaactc gggcgcgggg cggcgggttt gatcgggcat
    23581 acccagccgc gccgtttggc ggcgcgttcc gtagcagagc ggattgccga agagctgaaa
    23641 tccgaaatcg gcagcgcggt cggctataaa gtgcgcttca ccgaccacac ctcgcgcgat
    23701 gcctgcgtca agctgatgac cgacggcatc ctgctggcgg aaacccagac cgaccgttat
    23761 ctcgccgcct acgacacgat tatcatcgac gaagcgcacg agcgcagcct gaacatcgac
    23821 ttccttttgg gctatttgaa acaactcctg ccgcgccgcc ccgatttgaa agtcatcatc
    23881 acctcggcaa cgatagacgc agaacgcttt tcccaacact tcaacggcgc gcccgtgctg
    23941 gaagtgagcg gacgcaccta tcccgtcgaa atcctctacc gaccgctgat cggcaaagac
    24001 gaagacgacg cggaaataga attgaccgac gcgattgtcg atgcggcgga cgaattggcg
    24061 cgatatggcg aaggcgatat tttggtattc ctgccgggcg aacgcgaaat ccgcgaagcc
    24121 gccgaagccc tgcgcaaatc cacgctacgc cgcaacgacg aaatcctgcc cctgttcgca
    24181 cgcctgtcgc acgccgagca gcacaaaatc tttcacccct ccggagcgaa acgccgcatc
    24241 gtgctggcaa ccaacgtcgc cgaaacctcg cttaccgtgc cgggcatcaa atacgtcatc
    24301 gacaccggcc tcgcgcgcgt caaacgctat tccgcacggg cgaaagtgga gcagcttcat
    24361 atcgaaaaaa tctcccaagc cgccgcccgc caacgctccg gccgctgcgg acgcgtctcc
    24421 gcaggcgtat gtatccgatt gttttcagaa gaaaatttca acaaccgccc cgaatttacc
    24481 gaccccgaaa tcgcccgcag caacctcgcc gccgtcatcc tgcgcatggc atcgctgaaa
    24541 ctcggcgacg tagcggcatt cccattttta gaaatgcccg attcgaggta tattaatgat
    24601 gggtttcagg tgttgctgga attaggggca gtggaggccg cctgaaaaca agtaggatat
    24661 acacttctac ctgacaaaga ccaacaaacg ataaaactac ggcacatcta gatgcccaac
    24721 ctacaacatt gcacacggta aaaacatgaa acacttactc atcgattttg aaaacgtcca
    24781 gccgcaaaac ttagacaaat tactaaccga aaatacccat atttggctat ttataggtgt
    24841 attacacaaa atgttaccta ttagtctggt gcaatcccta ctacgtttcg gcgaacgtgt
    24901 ccatcttgtc cagttacaaa aaacggggaa aaacgcattg gatttttacc tgtcctatta
    24961 cctcggacaa attaccgcca cagaccccaa tgcccaaatc ggcatactct cgcgtgatgg
    25021 aggatacgat gttctggtcg aacatatttt gaaaaaccac caggcgaagg gtatcgtgcg
    25081 cctagccaat atagatgaag tacaacatca gaaaattact accgaaccgc cgtcagcatt
    25141 gctggaaaac actcctcagc ctgaaaccac cctcaaacca cagcaaccat taacttccta
    25201 tttccaagca gccctaactg cactgcgccg ccccgacgct ttccgcccct gccgcctgca
    25261 taacctgcga caaaatctgc gtaagcatat tttgagtgat ttgtttaaag aaaaaaccga
    25321 tgaagaatgc gaaataacca ctgctaacgt tatcaataaa ctcaaagcac aaaacttcat
    25381 cagcattgat gaacaggaaa ccgtttccta ccatctcagt gataatgatt tgttacaaag
    25441 aatccaacgc catattttaa gccaacgtcc caaaacctac gctgattttc aagccgtcgt
    25501 gcaaaaccga gcagatgcac ttcacttaac agtcggtacc aacgacattc aatcctttgc
    25561 gcgacatttg cgcgaccaaa acctgatccg ccaaaacaat gggaaaattg aatatgcacc
    25621 gtttactgaa cctaaaccac agccaacgcc caagcagcct aaaaaaaccg catgggaacc
    25681 tgatgaaatt atttggaaaa aagtgattgc cgcgttatcg ttaaagaacc gtcctaataa
    25741 aaccaaaact ttacgcaata caatccaggc actcacaaaa tccaatgcac aagaaactga
    25801 caaactgcta caacatttac aagataccca agtcctacgt attgacggta ctaaaattgt
    25861 gtatatcaag taggatgggc atttatgcct gacctacaaa accaaaaaca acctaacacc
    25921 cttaatcaac tccacaaacc cttttcagac aacctcgttt tttgaaaaac aatctgtaaa
    25981 cagataactg ctgaagaata ccgttgccga gccccaaaac ctgcctgcaa cttttattgt
    26041 gaactgccca ttatgaaaaa atcccttttc gttctctttc tctattcatc tctacttacc
    26101 gccagcgaaa tcgcctatcg ctttgtattc ggaattgaaa ccttaccggc tgcaaaaatg
    26161 gcagaaacgt ttgcgctgac atttgtgatt gctgcgctgt atctgtttgc gcgttataaa
    26221 acttcgcggc tgctgattgc gctgtttttc gcgttcagca ttattgccaa caatgtacat
    26281 tatgcggttt atcaaagttg gatgacgggt attaactatt ggctgatgct gaaagaggtt
    26341 accgaagtcg gcagtgcggg cgcgtcgatg ttggataagt tgtggctgcc tgcgttgtgg
    26401 ggcgtggcgg aagtcgtgct gttttgtagc cttgccaagt tccgccataa gacgcatttt
    26461 tctgccgata tattgtttgc cttcctaatg ctgatgattt tcgtgcgttc gttcgacacg
    26521 aaacaagagc acggtatttc gcccaaaccg acatacagcc gcatcaaagc caattatttc
    26581 agcttcggtt attttgtcgg acgcgtgttg ccgtatcagt tgtttgattt aagcaagatt
    26641 cctgtgttca aacagcctgc tccaagcaga atcgggcaag gcagtattca aaatatcgtc
    26701 ctgattatgg gcgaaagcga aagcgcggcg catttgaaat tgtttggcta cgggcgcgaa
    26761 acttcgccgt ttttaacccg gctttcgcaa gccgatttta agccgattgt gaaacaaagt
    26821 tattccgcag gctttatgac ggcagtatcc ctgcccagtt tctttaacgt cataccgcat
    26881 gccaacggct tggaacaaat cagcggcggc gataccaata tgttccgcct cgccaaagag
    26941 cagggctatg aaacgtattt ttacagcgct caggctgaaa accaaatggc aattttgaac
    27001 ttaatcggta agaaatggat agaccatctg attcagccga cgcagcttgg ctacggcaac
    27061 ggcgacaata tgcccgatga gaagctgctg ccgctgttcg acaaaatcaa tttgcagcag
    27121 ggcaggcatt ttatcgtgtt gcaccaacgc ggttcgcacg ccccatacgg cgcattgttg
    27181 cagcctcaag ataaagtatt cggcgaagcc gatattgtgg ataagtacga caacaccatc
    27241 cacaaaaccg accaaatgat tcaaaccgta ttcgagcagc tgcaaaagca gcctgacggc
    27301 aactggctgt ttgcctatac ctccgatcat ggccagtatg ttcgccaaga tatctacaat
    27361 caaggcacgg tgcagcccga cagctatctc gtgccgctag tgttgtacag cccggataag
    27421 gccgtgcaac aggctgccaa ccaggctttt gcaccttgcg agattgcctt ccatcagcag
    27481 ctttcaacgt tcctgattca cacgttgggc tacgatatgc cggtttcagg ttgtcgcgaa
    27541 ggctcggtaa cgggcaacct gattacgggt gatgcaggca gcttgaacat tcgcgacggc
    27601 aaggcggaat atgtttatcc gcaatgagtg gcgtaaaaac caataaagac aaattaagat
    27661 gatgtcgggg aagatgcccg accgacaaga ctatgcaaaa tatgaaaaac caagtacgcg
    27721 gatcaggcat ggatgcacga tccaatccgg ccaatgtttc agacggcctg caaaacagtt
    27781 cgagccatat cggtaccaac acgcgctacc gcctgaccaa gctcggcgaa caaatggcgc
    27841 gcctgcccat cgacccgaaa atcgcgcgca ttttgctggc ggcgaagaaa cacgactgta
    27901 tggcggaaat attggtgatt gcgtccgcgc tgtcgattca agacccgcgc gagcggccgt
    27961 tggaagcgcg cgatgctgcc tccaaggcac acgaacgttt taccgacaag cagtccgatt
    28021 tccttgccta tctgaacatt tgggacagct tccagcgtga gcgcgacaaa ggtttgtcca
    28081 acaagcagct ggtgcagtgg tgccgccaat atttcttgtc gcacctgcgg atgcgcgaat
    28141 ggcgcgagct acaccaccag cttgcccaaa ctgcgattga aatgggtttg accaccaaag
    28201 aagccgcttt cagacgttct cccgaagtca ggcagctcac gtcgtctgaa aatgcaggcg
    28261 accaagacct atccgccaaa ctcaaacaaa aacaactgga taagaaacaa caccgcgccc
    28321 aaatccgcgc tgccaaagaa gcgggctacg aacaaatcca ccgcgccctg ctcaccggcc
    28381 tcatcgccaa cgtcggcatg aaatcacccg acggcaacga ctacaccagc acgcgcggca
    28441 gccgcttcca ccttttcccc gcctccgccc tgttcaaggc gaagcccaaa tgggtgatgg
    28501 cggcagaact cgttgaaacg acaaaacttt atgcccgcga cgtagccgcc atccagcccg
    28561 aatggatcga gcaggaagcg ccgcacctcg tccgctacca ctatttcgag ccgcattggg
    28621 aacaaaaacg cggcgaagtc atcgccagcg aacgggtaac gctctacggc ctgaccgtcc
    28681 tgccgcgccg ccccgtgtcc tacggcagaa tcgcccccga agaagcgcgc gaaatcttta
    28741 tccgcggcgc attggtggca caggaatgcg atttgaaagc ggactttttt gtccacaaca
    28801 aaaagctgat taaagaaatt accgaactcg aacacaaatc gcgcaagcaa gacgtgctgg
    28861 tcgatgacga agccctgttt gcgttttata acgaacgact gcccgaaatg gcttggaaag
    28921 acgcgcaagg cagcgtttgg ggaagtgaag attccgtacg gattattgaa tctgacaaag
    28981 ccgagaggtc gtctgaaaat gagcgcaacg agtttcgtaa aaacaagcgt aatgggtctc
    29041 gccaaaatga aaatcacggc aacaccgtag gttgggttga aaacccaaca tcagccgcaa
    29101 ctgcaaaaac tgttgggttt gacaacccaa cctacgctac tcagcaaccc accccctccc
    29161 ccgagaggga gggtcgggga gagggcaaaa cagttgccgc acaaaccaac ttttccgcaa
    29221 ccgcagcaaa ccctctcccg caggagaggg aacagagtgc ctcagcttca acgttttcag
    29281 acgacctgcg tcctgcaaat ctgcagcaaa ccgccccctc ccccgtgggg gagggctggg
    29341 gagagagcaa aacagttgcc acccaaacca acttttccgc aacctcaaca ctttcagacg
    29401 accccaaacc caaaaagcag cctgcacctc aaaaaggccg tctgaaaccc ctacccctcg
    29461 ccgacatccg caccttccaa gcctggctca aaaccgccga gtgcgacaat ccgcgcctgc
    29521 tgttcctcag ccgcgacgat ctgatgcaac acgccgccgc acacattacc gaagaacagt
    29581 tccccaaatt ctggcaaacc gcagacggca aattcaaact ttcctaccgc ttcgagccgc
    29641 accatccgct agacggcgtg accatgaccg tgccgctgac cgtcctcaac cgcctgcacg
    29701 cgccatcgct cgaatggctg gtgcccggta tgttgcgcga aaaaatccag ctgctgatta
    29761 aagcactgcc gaagcaaatc cgccgcattt gtgtgcccgt acccgatttc atcaccaaat
    29821 tcctcgaaag caatcccgac cgccaagcga ccatcattcc ccagttggcg cactttatcg
    29881 ccaaaagcgc cagcgatatg cggattctcg agcaaatcga ccaagacgca tgggcggcgc
    29941 aagaattgcc cgaacactgc tatctgaatc tgcgcattat cgacgacggc ggacaagagc
    30001 ttgccggcgg ccgcaaactg cacgaattgc aacaacagct cggccaagcc gccgccgtca
    30061 ccttccgcga caacacccaa gaattcgagc gcgacaacgt taccacatgg gacatcggaa
    30121 ccctgcccga atccatcaaa ttcgcccgcg gcaaacaaca gctcaccggc tacctcggcc
    30181 tgcaaaaaga aaaagacggc cgcatcgccc tgcgcctgtt tgacaccacc gaagccgccg
    30241 aacaggcaca ccgtcaaggc gtcatcgaat tgatgaagct gcaattaaaa gagcaggtaa
    30301 aagacctgaa caaaggcatc caaggcttca cccaagccgc catgctgctc aaacacatca
    30361 acgccgacac cctgcgcgac gacctcaccc aagccgtctg cgaccgcgcc tttatcggcg
    30421 aagacgagct gccgcgcaac gaaaaagcct tcaaagaaca aatcaaacgc gcccgtagcc
    30481 gcctgcccgc cgtcaaagaa gccctcagcc gctacctgca ggaaaccgca gccgcctacg
    30541 ccgaactcaa cggcaaactc ggcaaacatc cattgaccca cctcctaaga ctacgcctgc
    30601 aaaccctgct tgcccccggc ttcgccaccc gcaccccgtg ggcacaatgg ccgcgcctcc
    30661 ccatctacct caaagccatg accctgcgcc tcgaaaaata cagcagcaac cccgcccgcg
    30721 acgcagcccg cgaagccgat atacaggaat tggaacaaat gtggcaggaa aaaaacgacg
    30781 gtttggtgaa acaaggacaa cccatttcag acaacctagc cgcgtttaaa tggatgattg
    30841 aagaattgag agtgtcactg ttcgcacagg aattgaagac accgtatcca gtgtcggtga
    30901 agaggttgtt aaaagagtgg gagaaaattt tttaactgaa taattctgcc gatcaaaatt
    30961 tcttgacaaa acaaatttta atgaatacta taagtagcat tatgagttta gaaaattttc
    31021 aattaataaa aacacaatta ggtgttccca gttatgaaaa tgatagagtt gcaatctatc
    31081 aaggagattg tatccagtta atggataaga tttcaaaagg atcattccaa atgacaatca
    31141 catctccacc atacaatatt ggtaaagaat atgagtctat tttagatttg gaacattatc
    31201 ttgagtggtg tgaaagatgg atgcaatcaa tacatcactt aactgaagat agcggatgtt
    31261 tttggttaaa tttaggatac ttacatgttg aaaaaaaggg actagcagtt cctattcctt
    31321 atcttttatg ggataaaact aactttttcc ttttacaaga ggtggtttgg aattatgcag
    31381 ctggagttgc atgccgtaat cgattttccc caagaaatga aaagttatta tggtatgtga
    31441 aaaatcctgc taaatataca ttcaatttag atgctgtacg cgatcccaac gttaaatatc
    31501 caaatcagaa aaaaaatggg aaattaaaat gtaatcctct aggaaaaaac ccaacggatg
    31561 tttggcaaat agcaaaagtc acttctggaa gaaataggtc atcgagagaa agaactgctc
    31621 atcctgccca atttccattg gaattaatag aaagaataat ccgagcaagt agcaatcaaa
    31681 atgatgtaat cttagatcca tttatcggct caggaacaac cgccttagcc ggactaaaaa
    31741 acaaccgttt tgtcatagga tttgaaatta acgatgagta tatagatatt ataaaagaac
    31801 gcttcaaaga gtatgatctt caaaatactt gatacttgta tataacggta tagaggatag
    31861 accctcctct atactgtatt tacaatattt atttttgata aagtattttt agtttacttc
    31921 tataagcctc tggagagagc ctcgcctgct ggcctgtcgc tgcagtttga gcaatccaat
    31981 ccgtatgatc taaccaacca aatctgataa ttttaatttc tggacgcaat tttaaatcag
    32041 gcataaattt ttcaaaattt atagttagat aataaccatt tttactctta ccagtaattc
    32101 catcttgtgg ttgtgcataa ctcctattac caaatatata ttttggatcc gatgaagttt
    32161 ttaattctat tgagtaatag tcgtctttaa tatatacaat atctttgtca tatttattct
    32221 tttctccttg ccaattttca aatctagcct caatattagc aggaattaaa gcatgtaata
    32281 acgcccctac aatctgagga gaaggaaaaa aatttttgcc aatttgcaaa ttaccaattc
    32341 tagacgagaa aatattttcc caactatcta aacaaagttg gacaatctct ttttctgaca
    32401 atggatgctg cttaatcagc tcttctgttt tggaaatcca taactcctca ttcaaagaag
    32461 catacggcga tatttttgat ctattcatat tatttaatcc cttctacaag ttcagaaata
    32521 ttaattgaaa aagacttagc taacagcgag atattcaaaa gacttatatt tctttctccg
    32581 cgttcaactg atccaatata agtacgatgt aatccaactt tttctgctaa ttcttcttgt
    32641 gaccaaccat taagtaaacg ataatgtttt acacgcttac caaactcaac taattcattt
    32701 tccataatct gtattatttt aataagtgaa tactttaagt ctacactcta taagtagcac
    32761 acttaacaaa ccatatccta ctgcgtgaat accatagcaa actgtagcct gcatcaaacc
    32821 gcgtgcatgc cttcgggcac acactcggtc tttctaaacc actccccctt tccacccaaa
    32881 ccaaaggtcg tctgaaaccc attttcagac gaccttttgc cactttgcaa agcaagtatt
    32941 cccaccaccc tctccccaaa tatcgcccaa accagtaaac ttcccatatt tcaacaactt
    33001 cttgaaagcc aaccatgtcc ggtatctacc taccccacct atttccgccc catatcgccg
    33061 aacgcggcct tttgtatttt cagcagggca aggttcgcga tgtccgaaaa acttccgccg
    33121 ggcgttatcg ggcctagcgc tgtttgctgc cggcggtctg aataatggtg gcgtcaacga
    33181 cggcagcgga tgctttctct acttttaggt ttttttcggt cagttggcgg ttaatcagtt
    33241 tgagcaattc ggacagggtg tcgtcttgcg ccagccagtt gcggtaacgg cataaggtgc
    33301 tgtaatcggg gatgctcagt tcgtcaaagc ggcaaaacag gttgaagtcg atgcgggtga
    33361 tgaggctgtg ctcgagttcg ggatcggaga ggctgtgcca ttgtccgagc agaacggctt
    33421 tgaacatgga caacagcggg taggcgggac gaccgcggtg gtctcggagg taacgggttt
    33481 tttgacggtt caggtattgt tcgatcggtt gccaatcaat cacctggtcc aacttcaata
    33541 gtgggaaacg gtcgatgtgt ttggcaatca tggcttgggc ggtttgctga aagaaggtgc
    33601 tcatgagaaa tctcctaaat gtcttggtgg gaatttaggg gattttgggg agttttgcaa
    33661 aggtctcagt ctttttaaac cacagccctt cccaactaaa ccaaaaggtc gtctgaaccc
    33721 tattttcaga cgaccttttg ccactttgta aaacaaatct tcccaccatc ctctccccaa
    33781 acatcgcccg aaccagtaaa cttctcatat ttcaacaact tcttggaagc aaaccatgcc
    33841 ccatatccac ccgctccacc tgttcccgcc ccatatcgcc gaacgcggac tgctctattt
    33901 tcagcagggc aaagttggtg ctgtccaaaa aacttccacc gggcgttatc gggcggaggt
    33961 atgcggtttg gaaaactatt gggtatggct gaagctggat agtgatttgt atattaaaga
    34021 cgaaagctgc gattgccctt atgtctaaag gtgcaaacat accttaaatt actatattac
    34081 ataggcaaaa tacaagccta taacgaattg gaaacaaaat gccgtctgaa agcattataa
    34141 aatctgttca ccttttcaga tgagtaatgt acacccctat acaatttttg ctactatacc
    34201 ccataaatcc acggctaaag atatccttat tatgtcctat gatttatcga aacgacttgt
    34261 aatcggctta gcatcaagtg ccctattcga cttatccgaa tcggataata tatttagaat
    34321 ggaaggggca gaaacctata ggcaatatca gagagaaaaa caaaaccatc ccctaaaaaa
    34381 ggcgttgtct ttccatttat taaaaaactt ctgtcaatca atgaaataaa cccaaacgac
    34441 ccaacaattg ggtttattct tttatccaga aacaatccag atacagatta cgagtcataa
    34501 ctataggctt aatattacac gattctcatt ccatcaaggc ggaaaaccgc acaaatactg
    34561 aaacactatc gatcgatttg taaacaagcc tacttaagta acttgcagtc cttatcattt
    34621 cctttaaaat aatccagccc gtcactacac gaactggcgg acttcttgca aataaaggtt
    34681 actagatttt cattcatctt aataataaaa ggatttttat ctttatctat ggctaccgcc
    34741 ttcaacatga atttactgtc taaggccccg cgcgcgattc cattcaaacg gatacaaaag
    34801 ccttctgcct ctttaatcgg caaacttggc catttggtag atgtttgttt aaatctccca
    34861 ttctgcagat aaaacttttc cataaaatgt gcattttcta acaaggctgc ccgcactgca
    34921 tttatctttg ctttctcaac ataattgcga tagctcggat aaacaattaa agcaagtaca
    34981 gacaatatca agaccactga tattaattca accagcgtaa acccccgatt atcagtcatt
    35041 actttacttc caataagaac agattattca acatatttct ttgaacagac ttactatccc
    35101 attcagcagt atgcatattt cccactctat tttttatccg cgggcagcac cggtttggct
    35161 gggccttt
//
LOCUS       DBBZXU010000008        34269 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.008, whole genome shotgun sequence.
ACCESSION   DBBZXU010000008 DBBZXU010000000
VERSION     DBBZXU010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 34269)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34269)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34269
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.008"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(102..251)
                     /locus_tag="ACJJDE_000335"
     CDS             complement(102..251)
                     /locus_tag="ACJJDE_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540325.1"
                     /translation="MPSETLLSVSDGILTNTVRRRKTAVFSCVSYADVSTHRTIQKAS
                     PYVPS"
     gene            complement(269..466)
                     /locus_tag="ACJJDE_000336"
     CDS             complement(269..466)
                     /locus_tag="ACJJDE_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540326.1"
                     /translation="MTTVPKSRIPVKPLPEKTTDEAKVEKWRQLGAEHGLSGEWAVAA
                     RLGENGFTEEQMENIANLFGR"
     gene            complement(477..1493)
                     /locus_tag="ACJJDE_000337"
     CDS             complement(477..1493)
                     /locus_tag="ACJJDE_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7540327.1"
                     /translation="MYRKLIALPFALLLAACGREEPPKALECANPAVLQGIRGNIQET
                     LTQEARSFAREDGRQFVDADKIIAAAYGLAFSLEHASETQEGGRTFCIADLNITVPSE
                     TLADAKANSPLLYGETALSDIVRQKTGGNVEFKDGVLTAAVRFLPVKDGQTAFVDNTV
                     GMAAQTLSVALLPYGVKSIVMIDGKAVKKEDAVRILSGKAREEEPSKPTPEDILEHNA
                     AGGDAGVPQAAEGAPEPEILHPDDGERADTVTVSRGEVEEARVQNQRAESEITKLWGG
                     LDTDVQKELVGEQRKWAQEKISNCRQAAAQADRQEYAEYLKLQCDTRMTRERIQYLRG
                     YSID"
     gene            complement(1592..2806)
                     /gene="gltS"
                     /locus_tag="ACJJDE_000338"
     CDS             complement(1592..2806)
                     /gene="gltS"
                     /locus_tag="ACJJDE_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015501 - glutamate:sodium symporter
                     activity [Evidence IEA];
                     GO_process: GO:0015813 - L-glutamate transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HGG7540328.1"
                     /translation="MEWEFNSYYTLIAATLVLLVGKFLVQKIKFLRDFNIPEPVAGGL
                     VAAIILFALHEAYGVSFKFEKPLQNAFMLIFFTSIGLSADFSRLKAGGLPLVVFTAIV
                     GGFILVQNFVGVGLATALGLDPLIGLITGSVSLTGGHGTSGAWGPNFETQYGLVGATG
                     LGIASATFGLVFGGLIGGPVARRLINKMGRKPVENKKQDQDDNADDVFEQAKRTRLIT
                     AESAVETLAMFAACLAFAEIMDGFDKEYLFDLPKFVWCLFGGVVIRNILTAAFKVNMF
                     DRAIDVFGNASLSLFLAMALLNLKLWELTGLAGPVTVILAVQTVVMVLYATFVTYVFM
                     GRDYDAAVLAAGHCGFGLGATPTAVANMQSVTHTFGASHKAFLIVPMVGAFFVDLINA
                     AILTGFVNFFKG"
     gene            complement(3024..4430)
                     /locus_tag="ACJJDE_000339"
     CDS             complement(3024..4430)
                     /locus_tag="ACJJDE_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7540329.1"
                     /translation="MTAAPDILYRQAAALLEQSNTAQALPLLQQAAEQGYAEAAFVLG
                     NHLLQNGQPEQALSWLEAAAAQRHPKALFSLLQQREHNGTPTGQLLNDYAWLGEQGHS
                     EAQLILMRYHAQRNDPQSLYWAELAAARYAAPAYYHLARHHQRQGDVETAIEQYEKAA
                     ALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLLADLLAAQRKPE
                     ALEWYRRAANKEQAEAQAKLAQYALTGELSERDPFQAARYAKAAAEKNHPEALKIMGD
                     LYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ
                     TETIYRLAETQAHAIGRPADYNAARKNYMEAAEFHHKNAAAALGRIYHYGLGTAQDPR
                     AAAHWYAIAAEQNHPSAQYHLACFYYHGQGVGCHVPTACYWLQAAISNGHTSAESLIS
                     LLEQWRREAHHAIGQKAV"
     gene            complement(4797..6056)
                     /locus_tag="ACJJDE_000340"
     CDS             complement(4797..6056)
                     /locus_tag="ACJJDE_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis protein"
                     /protein_id="HGG7540330.1"
                     /translation="MKQTVLKNNLQNLLESAENILLLQGPVGDFFLRLADWLTANGKT
                     VHKFNFNAGDDYFYPPTQAHTVVFNDNYDAFPEFLQEYITQHHIQAVVCFGDTRPYHV
                     IAKRIANENQASFWAFEEGYFRPYYITLEKDGVNAFSPLPRRADFFLEQFPKLAQQEY
                     KAPTPVHGGFTPMAKNAIRYYIELFRNPRKYPDYIHHRAPNAGHYLKPWSLSILKRLN
                     YYIEDIQIAKRVEAGKYGKFFIVPLQVFNDSQVRIHCDFPSVRSFLLHVLSSFAEHAP
                     ADTNIIIKHHPMDRGFIDYWRDIKRFIKEHPELKGRVIYVHDVPLPVFLRHGLGMVTI
                     NSTSGLSGLIHNMPVKVLGRAYYDIPGITDQNTLAEFWNHPTPPDKELFHAYRMYHLN
                     VTQINGNFYSQVFFPNKKTSNSSTPVI"
     gene            complement(6193..8241)
                     /locus_tag="ACJJDE_000341"
     CDS             complement(6193..8241)
                     /locus_tag="ACJJDE_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular polysaccharide biosynthesis protein"
                     /protein_id="HGG7540331.1"
                     /translation="MIPAYIPLRSFGIRKIPNITQFLPEYSLNKTVFNAQTIIGWGLR
                     PTTHQARAFAQSHGLPFVALEDGFLRSLGLGVAGYPPFALVYDDIGIYYDTTRPSRLE
                     QLILAANMPSEMLNQAQQAIDLILTHRLSKYNHALDFSDGLVQDSKNIVLVIDQTFGD
                     MAIQYGGADEATFRQMFQTALAENPDAEIWVKTHPDVLSGKKQGYLTDLAQQPRVRLL
                     AEDINPISLLQAVDKVYCVTSQMGFEALLCGKPLVTFGLPWYAGWGVSDDRHPKIDSL
                     VQTQRRAPRNLLQLFAAAYLQYSRYLNPNTGEAGSLFDVIDYLATVKRKNDKLRGELY
                     CVGMSLWKRAVAKPFFNVPSCRLKFISSTQKLAGVKLSDDARILAWGNGKEAIVRFAE
                     QHHIPLLRMEDGFIRSVGLGSNLVPPLSLVTDDMSIYFNAETPSRLEYILQNQNFDDQ
                     DFQTALKLQKMLTENHISKYNVGSSDFTAPSTDKTVILVPGQVEDDASIRYGSPQIYR
                     NLDLLRTVRERNPNAYIIYKPHPDVVSGNRIGHISPEDAARYADQTAEQTDILTCLQY
                     ADEVHTMTSLTGFEALLRGKKVSCYGLPFYAGWGLTQDLLPIPRRSRRLELWQLIAGT
                     LIHYPDYIHPETHQAINAETAAQILIRQKNMQKNNNGLHRGYFAKKLGKIKQLYRSFK
                     "
     gene            complement(8403..8942)
                     /gene="rfbC"
                     /locus_tag="ACJJDE_000342"
     CDS             complement(8403..8942)
                     /gene="rfbC"
                     /locus_tag="ACJJDE_000342"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7540332.1"
                     /translation="MNIIDTRIPDVKLLEPKVFGDERGFFMETFRDEWFRQNVAERTF
                     VQENHSKSTQGVLRGLHYQTENTQGKLVRVVSGEVFDVAVDMRRDSPTFGHWVGEVLS
                     ADNKRQLWVPEGFAHGFYVLSDEAEFVYKCTDYYNPNAEHSLIWNDATVGIDWPLLGE
                     PSLSAKDLAGKMLAEAATF"
     gene            complement(8997..9872)
                     /gene="rfbA"
                     /locus_tag="ACJJDE_000343"
     CDS             complement(8997..9872)
                     /gene="rfbA"
                     /locus_tag="ACJJDE_000343"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7540333.1"
                     /translation="MKGIILAGGSGIRLYPITRGVSKQLLPVYNKPMIYYPLSVLMLA
                     GIRDVLVITTPEDNDAFRRLLGDGSDFGIQISYAIQPSPDGLAQAFLIGEEFIGDDSV
                     CLVLGDNIFYGQHFSQSLKEAAASVETKGATVFGYQVKDPERFGVIEFDENFKALSIE
                     EKPKQPKSDWAVTGLYFYDNRVVEFAKQVKPSERGELEITTLNQMYLDDGSLNVQLLG
                     RGFAWLDTGTHASLLEAASFVETIENIQNLQVACLEEIAWRNGWLSSEEIRNLAKPMC
                     KNEYGRYLLRLVGKD"
     gene            complement(10085..11161)
                     /gene="rfbB"
                     /locus_tag="ACJJDE_000344"
     CDS             complement(10085..11161)
                     /gene="rfbB"
                     /locus_tag="ACJJDE_000344"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7540334.1"
                     /translation="MQTANKKTILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAG
                     NLKSLTEVADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIDSAGEF
                     IQTNIIGTFNLLEAARAYRRQMPSEQREAFRFHHISTDEVYGDLHGTDDLFTETTPYA
                     PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKP
                     LPVYGDGMQIRDWLFVEDHARALYQVVTEGEIGETYNIGGHNEKANIEVVRTICALLE
                     ELVPNKPQGVARYEDLITYVKDRPGHDVRYAIDAAKIGRELGWQPQETFESGIRKTVE
                     WYLNNQTWWSRVLDGSYNRERLGS"
     gene            complement(11162..12205)
                     /gene="galE"
                     /locus_tag="ACJJDE_000345"
     CDS             complement(11162..12205)
                     /gene="galE"
                     /locus_tag="ACJJDE_000345"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG7540335.1"
                     /translation="MNKKYPKINYIGNKEKIASWICDQPPSDVDTVADVFSGGCSFAY
                     EAKKRGYRVITNDILAINYQIALALIENNHETLNDDDVAMIFSGSPHAGFMSQRYAEK
                     FYFHDECQQLDLYRKNIGKLDNQYKRALAFTLMRRAMIRKMPYTEDMRPGDTANPYGA
                     SKAMVERMLTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAS
                     GRLPQLSVFGGDYPTPDGTGMRDYIHVMDLAEGHIAAMKAKGGVAGVHLFNLGSGRAY
                     SVLEIIRAFEAASGLNIPYQIQPRRAGDLACSFADPSHTKQQTGWETKRGLKQMMEDS
                     WRWVSRNPNGYGD"
     gene            complement(12218..13198)
                     /locus_tag="ACJJDE_000346"
     CDS             complement(12218..13198)
                     /locus_tag="ACJJDE_000346"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7540336.1"
                     /translation="MHTPLTYIDLFSGAGGLSLGFEQAGFQQLLSVEMESDYCQTYRT
                     NFPHHQLLQKDLTTLTEQDLINCLNGQAVDLIIGGPPCQGFSMAGKIGRTFTDDPRNH
                     LFKEFVRIVKIVQPYFFVMENVARLYTHNSGKTRIEIIQAFQNIGYSVECKILSAADF
                     GVPQIRSRVIFIGRRDKGKISFPEPLQISHQTVGSAIGHFPKLAAGESNPHVANHEAM
                     NHSAQMLEKMAFVKNGGNRNDIPEPLRPKTGDIRKYIRYNSNKPAVCITGDMRKVFHY
                     EQNRALTVRELAALQSVPDNFIFVAAKLPSSSRLVTPYRLYWQKLLLKVF"
     gene            complement(13229..15502)
                     /locus_tag="ACJJDE_000347"
     CDS             complement(13229..15502)
                     /locus_tag="ACJJDE_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tex family protein"
                     /protein_id="HGG7540337.1"
                     /translation="MNITQILSQELSATTAQINAAIELLDDGATVPFIARYRKEATGG
                     LDDTQLRRLAERLQYLRELEERKAVVLKSIEEQGKLSDDLRAQIEAADNKTALEDLYL
                     PYKPKRRTKAQIAREHGLQPLADVLLAEQPQDVEAAAQGYLNENVPDTKAALDGARAI
                     LMEQFAEDAELIGTLRDKLWNEAEIHAQVVGGKETEGEKFSDYFDHREPIRAMPSHRA
                     LAVLRGRNEGVLNIALKYRPDDTPITQQSEYEQIIARRFKVSDGHKWLRDTVRLTWRA
                     KIFLSLELEALNRLKEAADTDAITVFARNLKDLLLAAPAGRLTTLGLDPGYKNGVKCA
                     VVDDTGKLLDTVIVYLHQENNMLATLSRLIKKHGVKLIAIGNGTASRETDKIAGELVR
                     GMPEMGLHKIVVSEAGASIYSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKID
                     PKSIGVGQYQHDVNQSQLAKSLDAVVEDCVNAVGVDVNTASAPLLARISGLNQTLAQN
                     IVAYRNENGAFDSRKKLLKVPRLGEKTFEQAAGFLRINGGTEPLDASAVHPEAYPVVA
                     KMLAQQGISAAELIGNRERVKQIKASDFTDERFGLPTILDILSELEKPGRDPRGAFQT
                     ASFAEGIHEIGDLQVGMILEGVVSNVANFGAFVDIGVHQDGLVHISALSNKFVQDPRE
                     VVKAGDVVKVKVLEVDAARKRIALTMRLDDEPGGAKHKMPSENRSRERTAGRKPQRND
                     RAPANSAMADAFAKLKR"
     gene            complement(15567..16217)
                     /locus_tag="ACJJDE_000348"
     CDS             complement(15567..16217)
                     /locus_tag="ACJJDE_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7540338.1"
                     /translation="MISVEHVSKRYLTRQGWRTVLHDISFKMEKGEKIGILGRNGAGK
                     STLIRLISGVEPPTTGEIKRTMSISWPLAFSGAFQGSLTGMDNLRFICRIYNVDIDYV
                     KNFTEEFSELGQYLYEPVKRYSSGMKARLAFALSLAVEFDCYLIDEVIAVGDSRFADK
                     CKYELFEKRKDRSIILVSHSHSAMKQYCDNAMVLEKGHMHQFEDMDKAYEYYNSLP"
     gene            complement(16214..17011)
                     /locus_tag="ACJJDE_000349"
     CDS             complement(16214..17011)
                     /locus_tag="ACJJDE_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7540339.1"
                     /translation="MKALHKTSFWESLAIQRRVIGALLMREIITRYGRNNIGFLWLFV
                     EPLLMTFVIVLMWKFLRADRYSTLNIVAFAITGYPMLMMWRNASKRAVGSISSNASLL
                     YHRNVRVLDTILARMILEIAGATIAQIVIMAVLIAIGWIEMPADMFYMLMAWLLMAFF
                     AIGLGLVICSIAFNFEPFGKIWGTLTFVMMPLSGAFFFVHNLPPKVQEYALMIPMVHG
                     TEMFRAGYFGSDVITYENPWYIVLCNLVLLLFGLAMVSKFSKGVEPQ"
     gene            complement(17011..18174)
                     /gene="ctrB"
                     /locus_tag="ACJJDE_000350"
     CDS             complement(17011..18174)
                     /gene="ctrB"
                     /locus_tag="ACJJDE_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export protein CtrB"
                     /protein_id="HGG7540340.1"
                     /translation="MSEQLPVAVATETKAERKKPKKKSWIKKLSPLFWVTVIIPTVIS
                     LVYFGFFASDRFTSQSSFVVRSPKSQSSLNGLGAILQGTGFARAQDDIYTVGEYMRSR
                     SSLDELRKILPVREFYETKGDAFSRFNGFGFRGEEEAFYQYYKNQVMINFDTVSGIST
                     LNVTSFDALESKKINEALLKQGEALINQLNDRARADTVRYAEEVVKTAAERVKEASQN
                     LTDYRIANGVFDLKAQSEVQMGLVSKLQDELIVIQTQLDQVKAVTPENPQIPGLQARE
                     QSLRKEIDQQLRAISGGGHSSLSNQAAEYQRVYLENQLAEQQLAAAMTSLESAKVEAD
                     RQQLYLEVISQPSLPDLAHEPKRLYNIVATLIIGLMVYGILSLLTASIREHKN"
     gene            complement(18189..19364)
                     /gene="ctrA"
                     /locus_tag="ACJJDE_000351"
     CDS             complement(18189..19364)
                     /gene="ctrA"
                     /locus_tag="ACJJDE_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule polysaccharide export outer membrane
                     protein CtrA"
                     /protein_id="HGG7540341.1"
                     /translation="MFKVKFYIRHAVLLLCGSLIVGCSAIPSSGPSAKKIVSLGQQSE
                     VQIPEVELIDVNHTVAQLLYKAQINQSFTQFGDGYASAGTLNIGDVLDIMIWEAPPAV
                     LFGGGLSSMGSGSAHQTKLPEQLVTARGTVSVPFVGDISVVGKTPGQVQEIIKGRLKK
                     MANQPQVMVRLVQNNAANVSVIRAGNSVRMPLTAAGERVLDAVAAVGGSTANVQDTNV
                     QLTRGNVVRTVALEDLVANPRQNILLRRGDVVTMITNPYTFTSMGAVGRTQEIGFSAR
                     GLSLSEAIGRMGGLQDRRSDARGVFVFRYTPLVELPAERQDKWIAQGYGSEAEIPTVY
                     RVNMADAHSLFSMQRFPVKNKDVLYVSNAPLAEVQKFLSFVFSPVTSGANSINNLTN"
     gene            19491..20624
                     /gene="neuC"
                     /locus_tag="ACJJDE_000352"
     CDS             19491..20624
                     /gene="neuC"
                     /locus_tag="ACJJDE_000352"
                     /EC_number="3.2.1.183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0006047 - UDP-N-acetylglucosamine metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HGG7540342.1"
                     /translation="MKRILCITGTRADFGKLKPLLAYIENHPDLELHLIVTGMHMMKT
                     YGRTYKEVTRENYQHTYLFSNQIQGEPMGAVLGNTITFISRLSDEIEPDMVMIHGDRL
                     EALAGATIGALSSRLVCHIEGGELSGTVDDSIRHSISKLSHIHLVANEQAVTRLVQMG
                     EKRKHIHIIGSPDLDVMASSTLPSLEEVKEYYGLPYENYGISMFHPVTTEAHLMPQYA
                     AQYFKALELSGQNIISIYPNNDTGTESILQELLKYQSDKFIAFPSIRFEYFLVLLKHA
                     KFMVGNSSAGIREAPLYGVPSIDVGTRQSNRHMGKSIIHTDYETKNIFDAIQQACSLG
                     KFEADDTFNGGDTRTSTERFAEVINNPETWNVSAQKRFIDLNL"
     gene            20628..21314
                     /gene="neuA"
                     /locus_tag="ACJJDE_000353"
     CDS             20628..21314
                     /gene="neuA"
                     /locus_tag="ACJJDE_000353"
                     /EC_number="2.7.7.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acylneuraminate cytidylyltransferase"
                     /protein_id="HGG7540343.1"
                     /translation="MEKQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSKC
                     FDRIIVSTDGGLIAEEAKNFGVEVVLRPAELASDTASSISGVIHALETIGSNSGTVTL
                     LQPTSPLRTGAHIREAFSLFDEKIKGSVVSACPMEHHPLKTLLQINNGEYAPMRHLSD
                     LEQPRQQLPQAFRPNGAIYINDTASLIANNCFFIAPTKLYIMSHQDSIDIDTELDLQQ
                     AENILNHKES"
     gene            21315..22364
                     /gene="siaC"
                     /locus_tag="ACJJDE_000354"
     CDS             21315..22364
                     /gene="siaC"
                     /locus_tag="ACJJDE_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysialic acid capsule biosynthesis protein
                     SiaC"
                     /protein_id="HGG7540344.1"
                     /translation="MQNNNEFKIGNRSVGYNHEPLIICEIGINHEGSLKTAFEMVDAA
                     YNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVES
                     KGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSI
                     ESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFLDAIIGLSDHTLD
                     NYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKD
                     TIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKRPGNGDFSVNEYESLFGKIAA
                     CDIRKGAQIKKTDIE"
     gene            22448..23935
                     /locus_tag="ACJJDE_000355"
     CDS             22448..23935
                     /locus_tag="ACJJDE_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2,8-polysialyltransferase family protein"
                     /protein_id="HGG7540345.1"
                     /translation="MLKKIKKALFQPKKFFQDSMWLTTSPFYLTPPRNNLFVISNLGQ
                     LNQVQSLIKIQKLTNNLLVILYTSKNLKMPKLVHQSANKNLFESIYLFELPRSPNNIT
                     PKKLLYIYRSYKKILNIIQPAHLYMLSFTGHYSYLISIAKKKNITTHLIDEGTGTYAP
                     LLESFSYHPTKLERYLIGNNLNIKGYIDYFDILHVPFPEYAKKIFNAKKYNRFFAHAG
                     GISINNNIANLQKKYQISKNDYIFVSQRYPISDDLYYKSIVEILNSISLQIKGKIFIK
                     LHPKEMGNNYVMSLFLNMVEINPRLVVINEPPFLIEPLIYLTNPKGIIGLASSSLIYT
                     PLLSPSTQCLSIGELIINLIQKYSMVENTEMIQEHLEIIKKFNFINILNDLNGVISNP
                     LFKTEETFETLLKSAEFAYKSKNYFQAIFYWQLASKNNITLLGHKALWYYNALYNVKQ
                     IYKMEYSDIFYIDNISVDFHSKDKLTWEKIKHYYYSADNRIGRDR"
     gene            24180..25187
                     /locus_tag="ACJJDE_000356"
     CDS             24180..25187
                     /locus_tag="ACJJDE_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS5-like element ISNme1 family transposase"
                     /protein_id="HGG7540346.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQKTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYRNWLAQDNTLSELLELINRQLTEKGLKVEKASAAVIDATIIQTAGSKQRQAIE
                     VDEEGQVSGQTTLSKDKNARWTKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECK
                     HLSPLLEGLPKGTTVYADKGYDSAENRQHLEEHQLQDGIMRKACRNRPLTETQTKRNR
                     YLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAA
                     A"
     gene            25372..25594
                     /locus_tag="ACJJDE_000357"
                     /pseudo
     CDS             25372..25594
                     /locus_tag="ACJJDE_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006248253.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(25655..26608)
                     /locus_tag="ACJJDE_000358"
     CDS             complement(25655..26608)
                     /locus_tag="ACJJDE_000358"
                     /inference="COORDINATES: protein motif:HMM:NF042780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6716 putative glycosyltransferase"
                     /protein_id="HGG7540347.1"
                     /translation="MHQYYDAVILSVGNGLLKRFFKQNAQLNIASRPLIITLFPGVVF
                     GDQASILSRMGADIVLYNNKHDFRIAEEYKKQYKLSCQNILYGYPIFRHASKGRHGEK
                     IYFIDQVKIPFKKEERIYTLKKLIALAEKYPEKEFTILLRVADKDITVHQDKHSYIEL
                     AKQFQLPSNLTIERKSTAQAFQEMGYCLSYSSTMLFEAECKGIPVGVVADLGFSKSYA
                     NQHFLGSGVLVYFDQIDFTSPKIADPDWLDCYATKKVITTDEFNKLLKQVVPLQHDYQ
                     EYLSAVNSIESTKTIFLRKFKKLIRDPKKFFYDSKWLRKVI"
     gene            26991..28010
                     /gene="galE"
                     /locus_tag="ACJJDE_000359"
     CDS             26991..28010
                     /gene="galE"
                     /locus_tag="ACJJDE_000359"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HGG7540348.1"
                     /translation="MKKILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPR
                     LKTITGQEIPFYQGDIRDREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNV
                     SGSLVLAEEMARAGVFKIVFSSSATVYGDPGKVPYTEDMPLGDTTSPYGTSKSMVERI
                     LTDIQKADPRWSVILLRYFNPIGAHESGLIGEQPNGIPNNLLPYICQVAAGKLPQLSV
                     FGDDYPTPDGTGMRDYIHVMDLAEGHVAAMKAKGGVAGVHLFNLGSGRAYSVLEIIRA
                     FEAASGLTIPFEIKPRRAGDLACFYADPSYTKAQIGWQTQRDLSQMMEDSWRWVSNHP
                     NGYDD"
     gene            28126..29193
                     /gene="rfbB"
                     /locus_tag="ACJJDE_000360"
     CDS             28126..29193
                     /gene="rfbB"
                     /locus_tag="ACJJDE_000360"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008460 - dTDP-glucose 4,6-dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009225 - nucleotide-sugar metabolic
                     process [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HGG7540349.1"
                     /translation="MRKILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESL
                     TDIADNPRYAFEQVDICDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNI
                     VGTFNLLEAARAYRQQMPSEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG
                     DGMQIRDWLFVEDHARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPE
                     KPAGVARYEDLITFVQDRPGHDVRYAIDTAKISRELGWKPQETFESGLHKTVQWYLDN
                     KTWWQNVLNGSYRLERLGTGK"
     gene            29256..30122
                     /gene="rfbA"
                     /locus_tag="ACJJDE_000361"
     CDS             29256..30122
                     /gene="rfbA"
                     /locus_tag="ACJJDE_000361"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0045226 - extracellular polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HGG7540350.1"
                     /translation="MKGIILAGGSGTRLYPITRGVSKQLLPVYDKPMIYYPLSVLMLA
                     GIRDILVITAPEDNASFKRLLGDGSDFGISISYAVQPTPDGLAQAFIIGEEFIGNDNV
                     CLVLGDNIFYGQSFTQTLKQAAAQMHGATVFAYQVKNPERFGVVEFNENFRAVSIEEK
                     PQRPKSDWAVTGLYFYDNRAVEFAKQLKPSARGELEISDLNQMYLEDGSLSVQILGRG
                     FAWLDTGTHESLHEAASFVQTVQNIQNLHIACLEEIAWRNGWLSDEKLEELARPMAKN
                     QYGQYLLRLLKK"
     gene            30176..30733
                     /gene="rfbC"
                     /locus_tag="ACJJDE_000362"
     CDS             30176..30733
                     /gene="rfbC"
                     /locus_tag="ACJJDE_000362"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008830 - dTDP-4-dehydrorhamnose
                     3,5-epimerase activity [Evidence IEA];
                     GO_process: GO:0019305 - dTDP-rhamnose biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HGG7540351.1"
                     /translation="MNIIDTAIPDVKLLEPQVFGDARGFFMETFRDGWFKENIADCSF
                     VQENHSKSGKGVLRGLHYQTENTQGKLVRVVVGEVFDVAVDMREGSPTFGKWAGATLS
                     AQNQCQLWIPEGFAHGFYVLSDTTELTYKCTDYYKPEAEQVLIWNDPAIGIGWPLQTA
                     PLLSPKDLAGKTWAQAEKLRLTLSR"
     gene            complement(30777..32795)
                     /locus_tag="ACJJDE_000363"
     CDS             complement(30777..32795)
                     /locus_tag="ACJJDE_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0035673 - oligopeptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006857 - oligopeptide transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OPT family oligopeptide transporter"
                     /protein_id="HGG7540352.1"
                     /translation="MNKSLSGSVEEYRELTLRGMILGALITVIFTASNVYLGLKVGLT
                     FASSIPAAVISMAVLKFFKGSNILENNMVQTQASAAGTLSTIIFVLPGLLMAGYWSGF
                     PFWQTTLLCIAGGILGVIFTIPLRYAMVVKSDLPYPEGVAAAEILKVGGHEEGDNRQG
                     GSGIKELAAGGALAGLMSFCAGGLRVIADSASYWFKSGTAIFQLPMGFSLALLGAGYL
                     VGLTGGIAILLGISIAWGIAVPYFSSHIPQPSDIEMAAFAMKLWKEKVRFIGAGTIGI
                     AAVWTLLMLLKPMVEGMKMSFKSFGGGAPATERAEQDLSPKAMIFWVLSMMFILGVSF
                     YHFIGDSHITGGMAWLLVVVCTLLASVIGFLVAAACGYMAGLVGSSSSPISGVGIVSI
                     VVISLVLLLVGESGGLMADEANRKFLLALTLFCGSAVICVASISNDNLQDLKTGYLLK
                     ATPWRQQVALIIGCIVGALVISPVLELLYEAYGFTGAMPREGMDAAQALAAPQATLMT
                     TIASGIFAHNLEWVYIFTGIAIGAVLIAADLVLKKSSGGKLALPVLAVGMGIYLPPSV
                     NMPIVAGAVLAAVLKHIIGKKAENREGRLKNAERIGTLFSAGLIVGESLIGVIMAFII
                     AFSVTNGGSDAPLALNLQNWDAAASWLGLAFFVTGMFFFAQRVLKAGR"
     gene            complement(32991..34112)
                     /gene="dnaJ"
                     /locus_tag="ACJJDE_000364"
     CDS             complement(32991..34112)
                     /gene="dnaJ"
                     /locus_tag="ACJJDE_000364"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HGG7540353.1"
                     /translation="MSNQDFYATLGVARTATDEEIKKAYRKLAMKYHPDRNPDNKEAE
                     EKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQ
                     MFGGGSGRAQPDYQGEDVQVGIEITLEEAAKGVKKRINIPTYESCDVCNGSGAKPGTS
                     PETCPTCKGSGTVHIQQAIFRMQQTCPTCHGAGKHIKEPCVKCRGAGRNKAVKAVEVN
                     IPAGIDDGQRIRLSGEGGPGMHGAPAGDLYVTVRIRAHKIFQRDGLNLHCELPISFAT
                     AALGGELEVPTLDGKVKLTVPKETQTGRRMRVKGKGVKSLRSSATGDLYCHIIVETPV
                     NLTDRQKELLEEFERISTGLENQTPRKKSFLDKLRDLFD"
BASE COUNT         9117 a         8332 c         7953 g         8867 t
ORIGIN      
        1 ttaactttac ggcaaattgc cgattctatc gtatttcctt ttcggttgaa atcccaccct
       61 ttagggcggc aggatcagac tttagagcgg attaacaaaa attaggacgg aacatagggc
      121 gacgcttttt gtatcgtcct gtgtgttgaa acatcagcat aggaaacgca ggaaaagacg
      181 gctgttttgc gcctgcgtac cgtattagtc aaaatgccgt ctgaaaccga taacagggtt
      241 tcagacggca tttccgtcaa ttttcccttt atctgccgaa caggttggcg atattttcca
      301 tctgttcttc ggtaaaaccg ttctcgccca atctggcggc aactgcccat tcgcccgaca
      361 aaccgtgttc cgcaccgagc tgccgccatt tttcgacttt ggcttcgtct gtggtttttt
      421 cgggcagcgg tttgacggga atcctgcttt tggggacggt agtcatcggt ttgcccctaa
      481 tcgatggaat agccgcgaag atactgtatc cgttcgcgcg tcatccgcgt gtcgcattgc
      541 agcttgaggt attcggcgta ttcctgccgg tctgcctgcg cggcggcttg tcggcagttg
      601 ctgatttttt cctgcgccca cttgcgttgt tcgccgacca actctttttg cacgtcggta
      661 tcgagtcctc cccaaagttt ggtaatttcg gattccgcac gctggttttg tacgcgcgcc
      721 tcttccactt cgccccgtga tacggtaacg gtatcggcac gctcgccgtc gtcaggatgc
      781 aggatttccg gttcgggcgc gccttctgcg gcttggggta cgcccgcatc gccgccggcg
      841 gcattgtgtt ccaaaatgtc ttcgggcgtg ggtttggacg gttcttcttc acgggctttt
      901 ccgctcaaaa tcctgaccgc gtcttctttt ttcaccgcct tgccgtctat catcacgatg
      961 ctcttcacgc cgtaaggcag caacgcgaca gacagcgttt gcgccgccat accgaccgtg
     1021 ttgtcgacaa atgccgtctg accgtctttg acgggcagga agcggacggc tgccgtcaat
     1081 acgccgtctt taaactcgac attgccgccc gtcttctgcc gcacaatatc cgacaaagcg
     1141 gtttccccgt acagcagggg gctgtttgcc ttggcatcgg caagcgtttc agacggcacg
     1201 gtaatgttca aatcggcgat acagaacgtg cgcccgcctt cctgcgtttc cgaagcgtgt
     1261 tccaaagaaa acgccaaacc gtaggcggcg gcgataattt tgtcggcatc gacaaactgc
     1321 ctgccgtctt cgcgcgcgaa agaacgcgct tcctgcgtga gcgtttcctg aatattgccg
     1381 cgtatgcctt gcaacacggc ggggttggcg cattccaatg ccttgggcgg ttcttccctg
     1441 ccgcaagcgg caagcagcag ggcaaacggc agcgcaatga gtttccgata catgatgttc
     1501 cttccaaacg gtgcagaccg atagcggcta tcatagcaaa agcacctgca ggcggtaaac
     1561 cttgcaggtg ctttgtcgga aaggcggaaa atcagccttt aaagaaattc acaaaaccgg
     1621 tgagaatcgc ggcattaatc aaatcgacga agaacgcgcc gaccataggc acaatcaaaa
     1681 acgccttatg cgacgcgccg aaagtatgcg tgacggactg catatttgcc accgccgtcg
     1741 gcgttgcacc caagccgaaa ccgcaatggc cggcagccaa tactgccgca tcatagtcgc
     1801 gccccataaa gacataggta acaaaagtcg cgtacaaaac catcaccacg gtttgtacgg
     1861 caagaatcac ggttacaggc cccgccaaac cggtcagctc ccacagtttc aaattcagca
     1921 acgccattgc caagaaaagc gaaagcgaag cattgccgaa cacatcgatg gcgcggtcga
     1981 acatattgac cttgaatgcg gcagtgagga tgttgcggat gaccacgccg ccaaacagac
     2041 accacacgaa tttgggcagg tcgaacagat attctttgtc gaagccgtcc ataatctcgg
     2101 caaacgccaa acacgcggca aacatggcaa gcgtttcaac ggcagattcc gccgtaatca
     2161 ggcgggtgcg ttttgcctgc tcgaacacgt cgtccgcgtt gtcgtcctga tcctgttttt
     2221 tgttttcaac cggtttgcgg cccattttgt tgatcaggcg gcgcgcaacc ggcccaccga
     2281 tcaggccgcc gaacaccagc ccgaaagtag ccgatgcaat acccaaaccg gttgcgccga
     2341 ccaagccgta ttgcgtttca aaattaggtc cccacgcacc tgacgtaccg tgtccgcccg
     2401 tcagcgacac cgaaccggta atcagaccga tgagcgggtc caaacccaaa gccgtagcca
     2461 gtccgacccc gacaaagttt tgcaccaaga taaatccgcc cacaatcgcg gtaaaaacca
     2521 ctagcggcaa accgcccgcc ttcaaacggg aaaaatccgc gctcaagccg atggacgtga
     2581 agaaaatcag cataaacgca ttttgcagcg gtttctcaaa tttgaagctc acgccgtacg
     2641 cctcgtgcag cgcaaacagg ataatcgcgg caaccaaacc gccagcgacc ggctcgggaa
     2701 tattgaagtc tcgtaagaat ttgatttttt gaaccagaaa tttaccaacc agcaacacga
     2761 gcgtggcggc aatcagtgtg taataactgt tgaattccca ttccatgttg tttcacctcc
     2821 tagaaatatt tttccgagca tccgtttttg ttccggatgt agtgtgtttc aacgcttggc
     2881 gttatccgcc gagtgtcatg gtattgatgc gcggacaagg tgttttcaga aagaaatgaa
     2941 aacaatggcg tgtccgtgaa aaataactgg caaatattag gggaatagtt aaagattgtc
     3001 aaaaaatgcg agtgtaaatc ttttcagacg gccttttgtc cgatggcatg gtgtgcttcg
     3061 cgtcgccatt gttctaatag ggatattaat gattcggccg aagtgtggcc gttgctgatg
     3121 gcagcctgca gccagtagca ggcggtcgga acatgacagc cgacaccttg tccgtgatag
     3181 taaaaacagg cgaggtggta ttgggcggaa gggtggtttt gttcggcagc gatggcgtac
     3241 cagtgtgcag ccgcccgagg atcttgcgcc gtaccgaggc cgtaatggta gatgcggcct
     3301 aaggcagccg ccgcgttttt atggtggaac tcagcagctt ccatgtaatt tttgcgtgcg
     3361 gcattatagt cggcgggacg accgatggca tgggcttgtg tttccgccaa acggtagatg
     3421 gtttcggttt gttgctgttg cagggcggca gttttgattt gttcgtattg ttgcggatgg
     3481 tacagcgcgg cgtcgctgat gagtttttgt gctgcggcgg cagaacccag cgcggcagca
     3541 cggtggtagt aatcgtgcgc gatatggttg tcagctttga tgccgaggcc gtagcggtag
     3601 aggtcgccca tgattttcag ggcttcagga tggtttttct cggcagcggc tttggcatag
     3661 cgcgccgctt ggaacggatc gcgttcggaa agttcgccgg tcagggcgta ttgggccagc
     3721 ttggcttgtg cttccgcttg ctccttattg gcggcacgac gataccattc taaggcttcg
     3781 ggtttgcgtt gggcggcaag aaggtcggcc agcagggttt gtgcggcgat gtggccggct
     3841 tgtgcggctg gttcgagata gtgttcggct tgtgcgtggt tggggctgac acctgtaccg
     3901 tagaagtaga tttgaccaag ttgccagcag gcggcagtta cgccgagtgc tgccgctttt
     3961 tcgtattgtt cgatggctgt ttcaacgtcg ccttggcgtt gatgatggcg tgccagatgg
     4021 taatacgcag gtgcggcata tcgggcggca gcaagttccg cccagtagag cgattgtgga
     4081 tcgttgcgtt gcgcgtggta acgcatgagg attaattggg cttctgagtg cccctgctca
     4141 cccagccagg catagtcgtt gagaagctgt ccggtcgggg tgccgttgtg ttcgcgttgt
     4201 tgcagcaggg agaagagtgc tttgggatgg cgttgggccg cggcggcttc caaccatgaa
     4261 agtgcctgct ccggttggcc gttttgcagc agatggttgc ccaatacgaa agcagcttcc
     4321 gcataacctt gctctgccgc ctgttgcaac aggggcaggg cttgggcggt attggattgt
     4381 tccaaaaggg cggcggcttg ccggtagagg atatcaggag cggcggtcat ggtttgcggg
     4441 cggatataaa gtggaagacg gatgctgcgg catatgggcg gcgataccgg ttgagggctt
     4501 tgtaaaaata ttgctcgcca cagttttgta aagtgtattg ccttgctggc ttatctttag
     4561 gatgtttggc ttgttatatt gttttgcctg ggagtacatc catattttgt gtgttattaa
     4621 ggcctcagct tgagtcggta tgcgctcatg gcagctcggt cattatactg tttttgtaat
     4681 ttattgttaa tgataaatgc agatttttgt gttttattta catggcagta gctaaggtat
     4741 tgattgtttc aggccgtctg aaatgttttc agacggcctg aacttccttc gctaagtcag
     4801 attactggtg tggaagagtt ggaggttttt ttgttgggga aaaacacctg actgtagaag
     4861 ttgccgttaa tttgggtcac gttgaggtgg tacattcggt aggcatggaa cagctctttg
     4921 tcaggcggtg tcggatgatt ccaaaattct gccaaggtat tttggtcagt aatgccggga
     4981 atatcataat aggcacggcc gagaacctta actggcatat tgtgaatcag tccggacagg
     5041 ccgctggtgc tgttgatggt gaccatgccg agaccgtggc gcaggaaaac gggcaggggg
     5101 acatcatgga cataaatcac gcggcctttg agttcggggt gttctttgat aaagcgttta
     5161 atgtcgcgcc agtagtcgat aaaaccgcgg tccatcggat gatgcttgat gatgatgttg
     5221 gtatcggcag gcgcgtgctc ggcaaatgaa ctcaaaacat ggagcaggaa gctgcggacg
     5281 ctgggaaagt cgcaatggat acggacttgg ctgtcgttga atacctgtaa gggaacaata
     5341 aaaaacttgc cgtatttgcc tgcttccaca cgtttggcga tttggatgtc ttcaatatag
     5401 tagttcaaac gcttgaggat ggagagcgac cacggtttga ggtaatggcc ggcattgggt
     5461 gcgcggtggt ggatgtagtc ggggtatttg cgtggattgc ggaacaactc gatatagtaa
     5521 cggatagcgt tttttgccat gggcgtaaaa ccgccgtgta ccggcgttgg cgctttatat
     5581 tcttgctggg caagcttagg gaattgttca agaaaaaagt cggcacggcg cggcaacggg
     5641 gaaaatgcgt tgacgccgtc tttttctaag gtgatgtagt aggggcggaa atagccttct
     5701 tcaaacgccc agaaactggc ttggttttcg tttgcaatgc gttttgcaat gacgtgataa
     5761 gggcgtgtgt cgccaaagca gacaacggcc tggatgtgat gttgagtgat gtattcttgc
     5821 aaaaactcag gaaaggcatc gtagttgtcg ttaaaaacaa cggtatgcgc ttgagtgggc
     5881 ggataaaaat agtcgtcgcc tgcattaaag ttgaatttat gtacggtttt gccgtttgca
     5941 gtcagccagt cggcaaggcg cagaaaaaaa tcgccgacag ggccttgaag cagcaggata
     6001 ttttctgcgc tttcaagcag gttttgcagg ttatttttga ggacggtctg tttcatgttg
     6061 caatgtggtt ttgtttttta tgtaatagtt ttaggttgaa ctttcaagca tacgccaaga
     6121 gaattaacga tgcaaaggca atgatgccgc aatagaggca agtttatgac gcatcgttaa
     6181 ctttgatggt atttatttga aagatcgata tagttgtttg attttaccta attttttggc
     6241 aaagtacccg cgatgtaatc cgttgttgtt tttttgcata tttttttgtc gtatcaggat
     6301 ttgggctgcg gtttctgcat ttatggcctg atgggtttcg gggtggatgt agtcgggata
     6361 gtggatgagc gtgccggcaa tcagctgcca aagctcaagt ctgcggctac ggcgcggaat
     6421 ggggagcaga tcttgggtaa gtccccagcc tgcgtaaaaa ggcaggccgt agcagctgac
     6481 ttttttgccg cgcaacaagg cttcaaaacc ggtcagcgaa gtcatggtat gtacttcgtc
     6541 tgcgtattgg agacaggtca ggatgtcggt ttgctcggcg gtttggtcgg catatcgtgc
     6601 agcatcttca ggggaaatat ggccgatgcg gttaccgctg actacatcgg gatgcggttt
     6661 gtagatgata taggcattgg ggtttcgttc gcgtacggta cggagcaaat ccagattgcg
     6721 gtagatttgg ggcgaaccgt agcggataga cgcatcatct tcaacctggc cgggaacgag
     6781 gatcacggtt ttgtcggttg acggggcggt gaagtctgag ctgccgacgt tgtatttact
     6841 gatgtggttt tcggtcagca ttttttgcag cttcaaggcc gtctgaaagt cttgatcgtc
     6901 gaagttttgg ttttgtagga tgtattcaag acgggacggg gtttcggcat tgaaataaat
     6961 gctcatatcg tcggtaacga gcgacagcgg cggcactaag ttggagccga gtccgaccga
     7021 gcggataaag ccgtcttcca tgcgcagcag ggggatgtgg tgttgttcgg caaagcggac
     7081 gatggcctct ttgccgttgc cccaggcaag gatgcgtgca tcgtcggaca gtttgacccc
     7141 tgccagtttt tgggtggaag agataaattt cagacggcaa gagggtacgt taaagaacgg
     7201 tttggcaacc gcgcgtttcc acaaagacat accaacgcaa tacaactcgc cacgcaattt
     7261 gtcgtttttg cgtttgaccg tcgccagata gtcgatgaca tcaaagaggc tgcctgcttc
     7321 gccggtattg gggttgaggt agcggctgta ttgcagatag gctgcagcga agagctgcag
     7381 caagttgcgg ggggcgcggc gttgggtttg aacaaggctg tcgattttag gatggcggtc
     7441 gtcactcacg ccccatccgg cataccacgg caaaccaaac gttaccaaag gcttgccgca
     7501 caacaaggct tcaaaaccca tttgcgaggt cacgcaatac actttgtcca ccgcttgcag
     7561 cagcgaaatc ggattaatgt cttcagccaa taaacgcaca cgcggctgct gtgccaaatc
     7621 agtaaggtaa ccctgtttct tgccgctcaa tacatcggga tgggttttga cccagatttc
     7681 cgcatcagga ttttcggcta aggccgtctg aaacatttgg cggaatgtgg cttcatctgc
     7741 gccgccatat tgaatcgcca tatcgccgaa agtttgatca attaccaaaa caatgttttt
     7801 gctgtcttgt acgaggccgt ctgaaaaatc cagagcatgg ttatatttag acaaacggtg
     7861 cgtcaaaatc aaatcaatgg cctgctgcgc ttggttaagc atttcagacg gcatgtttgc
     7921 ggctaaaatc aactgctcca aacgcgatgg gcgggttgtg tcgtaataga tgccgatatc
     7981 gtcgtaaacc agtgcgaagg gcggataacc ggccacgcct aagcccagtg agcgtaaaaa
     8041 accgtcttcc aaggctacaa acggcaagcc atgtgattgt gcaaaagcac gtgcttggtg
     8101 ggtggtcggg cgtaagcccc agccaatgat ggtttgggcg ttgaatacgg ttttgttaag
     8161 tgaatattcc ggtagaaatt gcgtaatatt cggaatttta cgtataccga aagagcgaag
     8221 aggaatgtag gcaggaatca caataaatag gaaaaaatat tactgacaat ataatatctt
     8281 attaacagat tttgtgtaaa ttttctgact atttaaatat agtagaaatt tagttagtag
     8341 gctagctggt aaaaattagg tcatcttgct acaaattacc cacgatgacc taaaagtgaa
     8401 aattaaaatg tggccgcttc agcaagcatc ttgcctgcca aatccttggc cgataggctt
     8461 ggttctccca ataaaggcca gtcgattccc actgtggcat cattccaaat tagggaatgt
     8521 tccgcattcg ggttgtaata gtcggtgcat ttgtagacga attccgcttc atcgctcaac
     8581 acataaaatc catgggcaaa cccttccggc acccataatt ggcgtttgtt gtctgccgat
     8641 aaaacctcac cgacccagtg gccgaaagta ggactatcac gacgcatatc cacggcaaca
     8701 tcaaagactt cgcctgatac cacgcgcacc agtttgcctt gtgtattttc ggtttgataa
     8761 tgtaaaccgc gtaatacgcc ttgggtggat ttgctgtggt tttcctgcac gaaagtgcgc
     8821 tcggctacat tttggcggaa ccattcatca cggaaggttt ccataaaaaa accacgctcg
     8881 tcaccgaaga ctttgggttc gagcaatttg acatcgggaa tgcgggtatc gatgatattc
     8941 atcatgtttt cctaaaaagc gtttcagacg gcctgaaaac tggtaaaagc aacctcttaa
     9001 tctttgccaa ccaagcgcaa taaatagcgg ccatattcat ttttacacat tggctttgcc
     9061 aagtttctga tttcttcgct gctcaaccag ccattacgcc atgcgatttc ttccaaacag
     9121 gcgacttgta ggttttgaat gttttcaatg gtttcgacaa acgaggctgc ttccaacagg
     9181 ctggcgtgtg tgccggtatc aagccatgcg aaaccgcgac cgagcaattg gacattgagc
     9241 gaaccatcgt ccaaatacat ttgattcaag gtggtaattt ccaattcgcc gcgttcagac
     9301 ggcttcactt gtttggcaaa ctcgactacg cgattatcgt agaaatagag gccggttacc
     9361 gcccaatcgg atttaggttg tttcggtttt tcttcgattg acagggcttt gaaattctca
     9421 tcaaactcaa tcacaccgaa acgctcggga tctttcactt gatagccgaa tacggtagca
     9481 cctttggttt ccacggaagc ggcggcttct ttcagggatt ggctgaaatg ctggccatag
     9541 aaaatattgt cgcccaacac caaacacacc gaatcatcgc cgataaattc ttcaccaatt
     9601 aaaaaggctt gcgccaaacc atcggggctg ggttggatgg cgtaggaaat ttgaataccg
     9661 aaatcgctgc catcacccag taagcggcgg aaagcatcgt tgtcttcggg ggtggtaatc
     9721 accagcacat cgcggattcc ggccaacatc aacaccgaca aggggtaata aatcatcggt
     9781 ttgttgtaca ccggtagtaa ttgctttgat acgccgcggg taatcgggta aaggcggata
     9841 ccgctgccgc ctgcgagaat aatgcctttc atcagtttac tttccttatg tagtttttca
     9901 ggcggccttc atgccgtctg aacgtatttt tattatttga ggcctttgca aagccacaga
     9961 tttgagtaca gttcgaagtt atagcagcgc agaaagcgca gacatatcac aaagataggc
    10021 aagctttcga gcagcgcata acgaagaaat gtgccaaaga tggggagttt gcaaaggtct
    10081 ctatttaact gcctaagcgt tcacgattgt agctgccgtc taacacgcgc gaccaccaag
    10141 tttgattgtt taaataccat tccactgttt tgcggatgcc gctttcaaaa gtttcttgcg
    10201 gctgccaacc caactcacgg ccgatttttg cggcatcaat cgcatagcgc acatcatggc
    10261 cggggcggtc tttgacatag gtaatcaaat cttcataacg cgccacgcct tgcggtttgt
    10321 tcggcaccaa ttcttccagc agggcgcaaa tggtgcgcac cacttcaata ttggcttttt
    10381 cattgtggcc accaatgttg taagtttcgc cgatttcgcc ttctgtgacc acttgataca
    10441 gcgcacgcgc atgatcttca acaaacagcc agtcgcggat ttgcataccg tcgccataca
    10501 ccggcagtgg tttgccatca agcgcattca gaatcatcag tggaatcagt ttttcaggaa
    10561 aatgataagg gccgtagtta ttagaacaat tggtcacaat ggtcggcagg ccgtaagtac
    10621 gcagccatgc gcgcaccaaa tggtcgctgg aggctttgga agccgaataa ggactggaag
    10681 gggcgtaagg cgtggtttcg gtaaacaaat catccgtgcc gtgcaaatcg ccatagactt
    10741 catcggtgga aatatggtgg aaacggaagg cttcgcgctg ttcagacggc atttgccgcc
    10801 ggtaggcgcg cgcagcttca agtagattga acgtgccgat gatattggtt tggataaatt
    10861 ctcctgcaga atcgatggag cggtcgacat gactttccgc cgccaagtgc atcacggcat
    10921 caggccggtg ttgtgcgaat acgcggtcga gttcggcgcg gtcgcaaata tccacttgtt
    10981 caaaagcata gcggggatta tcggctacct cggtcaaaga tttcaaattg ccggcataag
    11041 tcagcttatc gacattgacg acagcgtccc gggtgtttcg gataatatgg cggacaacgg
    11101 cagaaccgat aaagcccgcg ccgccggtaa cgaggatggt ttttttgttt gcggtttgca
    11161 tttaatcccc atatccgttg gggttgcggc tgacccaacg ccacgaatcc tccatcattt
    11221 gtttcaaacc gcgtttggtt tcccagccgg tttgttgttt ggtatgggac gggtcggcaa
    11281 aggaacacgc caagtcgccg gcgcgacggg gttggatttg atagggaata tttaagccgg
    11341 atgcggcttc aaaggcacgg atgatttcca aaacggaata ggcgcgcccc gaacccaagt
    11401 tgaacaaatg tacgccggca acaccgcctt tcgccttcat tgccgcgata tgcccttctg
    11461 ccaaatccat cacatgaata tagtcgcgca taccggtgcc gtcgggggtc ggataatcgc
    11521 cgccgaatac cgacagttgc ggcagcctgc ccgaagccac ttggcagata tagggcaaaa
    11581 ggttgttggg aatgccgttg ggctgttcgc cgatcaagcc gctttcatgc gcgccgatcg
    11641 ggttgaaata acgcaacaaa atcacgctcc aacgcggatc ggctttttgg atgtcggtta
    11701 acatccgttc caccatcgct ttggacgcgc cataaggatt agcggtatcg cccgggcgca
    11761 tatcttccgt atagggcatt ttacgtatca tggcgcgacg cattaaagta aacgccaaag
    11821 cgcgtttata ctggttatcc agtttcccta tatttttacg gtacaaatca agttgttggc
    11881 attcatcgtg aaaatagaat ttttcggcat aacgctgact cataaaaccg gcatgcgggc
    11941 tgcctgaaaa aatcattgcg acatcatcgt catttaatgt ttcatggttg ttttctatta
    12001 atgctaaagc aatttggtaa ttaattgcca aaatatcgtt agtaatcaca cgatagccgc
    12061 gttttttggc ttcataggca aaggaacagc ctccactaaa tacatctgca actgtatcta
    12121 catcagacgg aggctggtca caaatccagg aagctatttt ctctttatta ccgatatagt
    12181 taattttcgg atatttctta ttcattttca ctcattttta aaatactttc agcaatagct
    12241 tttgccaata aaggcggtac ggcgttacca acctgctgct gctgggcaat tttgctgcca
    12301 caaaaataaa attatcaggg acagattgta aggcagctaa ttcacgaacg gttaaagccc
    12361 gattctgttc atagtgaaaa actttgcgca tatctcctgt aatacaaacg gctggtttgt
    12421 tgctgttgta acggatgtat ttacggatat cacctgtttt cggacgtaat ggttcaggaa
    12481 tatcgttacg gttacctcca tttttaacaa atgccatttt ttctaacatt tgtgccgaat
    12541 gattcatagc ttcatgattt gcaacgtgtg gattgctttc gccagcagcc agttttggaa
    12601 aatgtcctat tgctgatcca acagtctgat gggaaatctg caaaggttcg ggaaaggaaa
    12661 ttttgccttt atccctcctc ccgataaata tcactcggct acgtatctga ggaacaccga
    12721 aatcggctgc actcagtatc ttacattcca ccgaataacc gatattctga aatgcttgaa
    12781 taatctcaat acgtgtttta cctgaattgt gtgtatagag tcgcgctaca ttttccataa
    12841 caaaaaaata tggttggaca attttaacta ttcggacaaa ctctttaaat aaatggttgc
    12901 gtgggtcatc tgtaaatgtc cgtccaatct ttcctgccat actaaaacct tgacaaggtg
    12961 gtcctccaat aatcaaatca actgcttgtc cgttaagaca attgattaaa tcttgttcgg
    13021 ttagtgtggt taaatctttt tgcagtaatt gatgatgggg gaagttggta cggtaagtct
    13081 gacaataatc agactccatt tcaacagaaa gcaattgttg gaatccggct tgttcaaaac
    13141 ccaaggatag gcctcctgct cctgagaaaa ggtcaatata ggtaagtggt gtgtgcataa
    13201 gtcaaaatcc ataaactctt cgattatttt accgcttcag cttcgcaaac gcatccgcca
    13261 tcgccgaatt ggctggggcg cggtcgttgc gttggggttt gcggccggct gtccgttcgc
    13321 ggctgcggtt ttcagacggc attttatgtt ttgcgccgcc cggttcgtca tccaagcgca
    13381 tggtcagcgc gatgcgtttt ctggcggcat cgacttccag cactttcact ttcactacat
    13441 cgccggcttt caccacttcg cgcgggtctt ggacgaattt attggatagg gcggagatgt
    13501 gcaccaagcc gtcctgatgc acgccgatgt ccacgaacgc gccgaagttg gcaacgttgg
    13561 aaaccacgcc ctctaaaatc ataccgactt gcaagtcgcc gatttcgtgg atgccttcgg
    13621 caaacgatgc cgtctgaaac gcgccgcgcg gatcacggcc gggtttttcc agttcggaca
    13681 ggatgtccaa aatggtcggc aggccgaagc gttcgtcggt gaagtcggac gctttgattt
    13741 gcttcacgcg ctcgcggttg ccgatgagtt cggcggcgct aatgccttgt tgcgccagca
    13801 ttttggcgac gacgggatag gcttcggggt ggacggcgct cgcgtccaac ggctctgtgc
    13861 cgccgttaat ccgcaaaaag cctgccgcct gctcgaaggt tttttcgccc aaacgcggta
    13921 ctttcagcaa ttttttgcgg ctgtcgaacg cgccgttttc attgcggtag gcgacgatgt
    13981 tttgggcaag ggtctgattc aaaccggaaa tccgcgccaa gagcggggcg gaggcagtat
    14041 tcacgtccac gccgacggcg ttcacgcagt cttcgaccac cgcgtccagc gatttggcga
    14101 gctggctttg gttcacgtcg tgctgatact ggcccacgcc gatggatttg gggtcgattt
    14161 tgaccagctc ggcaagcggg tcttgcagcc tgcgggcgat ggacaccgcg ccgcgcaggg
    14221 aaacgtccaa gtcggggaac tcgcgcgctg ccagttcgga cgcggaataa atcgacgcgc
    14281 cggcttcgga aacgacgatt ttgtgcagcc ccatttccgg cattccgcgc accagttcgc
    14341 ccgcgatttt gtcggtttcg cggctggcgg tgccgttgcc gatggcgatg agcttcacac
    14401 cgtgtttttt aatcaggcgc gacagcgttg ccaacatatt gttttcttga tgtaaataga
    14461 caatgacggt atccagcagc ttgcccgtgt cgtccaccac ggcacatttc acgccgttct
    14521 tgtatccagg gtctagaccc aaagtggtca gccgtccggc gggtgcggcg agcagcaagt
    14581 ctttgagatt tcgggcaaac acggtaatcg cgtcggtgtc ggcggcttct ttcaaacgat
    14641 ttagggcttc gagttccaac gacaaaaaga tttttgcgcg ccaagtcaga cgcacggtgt
    14701 cgcgcagcca tttgtggccg tctgaaacct tgaaacggcg ggcgatgatt tgctcgtatt
    14761 cgctttgctg cgtaatcggc gtgtcgtcgg gccggtattt gagcgcgatg ttcaacacgc
    14821 cttcgttgcg gccgcgcaaa accgccagcg cacgatggct gggcatcgca cgaataggtt
    14881 cgcggtggtc gaaataatcg ctgaattttt cgccttcggt ttctttgcct ccaacgactt
    14941 gcgcgtggat ttcggcttcg ttccacaact tatcacgcag cgtgccgatg agttccgcgt
    15001 cttcggcaaa ctgttccatc agaatcgcgc gcgcgccgtc caatgcggct ttggtgtcgg
    15061 ggacgttttc gttcaggtag ccctgcgcgg cggcttccac atcctgcggc tgctcggcaa
    15121 gcaacacgtc cgccagcggc tgcaaaccgt gttcgcgcgc gatttgcgct ttggtgcggc
    15181 gtttgggttt gtagggcaga tacaggtctt ccagcgcggt tttgttatcg gcggcttcga
    15241 tttgcgccct gaggtcgtct gaaagcttgc cttgctcttc aatgcttttt aaaacaacgg
    15301 ctttgcgctc ttccaactcg cgcaggtatt gcagccgctc ggcaagccgg cgcagctgcg
    15361 tatcgtccaa cccgcccgtg gcttccttgc ggtagcgggc gataaagggc acggttgcgc
    15421 cgtcgtccaa aagctcgata gcggcattga tttgcgcggt agtcgcggaa agttcttggg
    15481 aaagaatttg agtaatgttc atcaataaaa ttccaacgga caggccgtct gaaatttcag
    15541 acggcctgat ttaaaaaaca atcgctttaa ggtagcgaat tataatattc gtaggctttg
    15601 tccatatctt caaactggtg catatgccct ttttccagca ccatcgcatt atcgcaatat
    15661 tgcttcatgg cgctgtggct gtgcgacacc aagatgatgg aacggtcttt gcgcttttca
    15721 aacaactcgt acttacattt atcggcaaaa cgcgagtcac caactgcaat cacttcgtca
    15781 atcaaatagc aatcaaactc taccgccaac gacaaagcaa atgccaaacg cgccttcata
    15841 cctgaagaat aacgcttgac cggctcgtaa agatattgcc ccaactcgga aaactcttcg
    15901 gtaaagttct tcacataatc gatatcgaca ttgtaaatcc ggcagatgaa acgcaaattg
    15961 tccataccgg tcagactgcc ttgaaacgca ccggagaatg ccaaaggcca agaaatactc
    16021 attgtccgct tgatttcacc cgtggtcggc ggctcaacgc cactgatcaa acggatgagc
    16081 gtcgatttac ctgcaccgtt gcggccgaga ataccgattt tctcgccctt ctccattttg
    16141 aagctaatat cgtgcaagac tgtccgccaa ccttggcggg tcagatagcg tttggaaacg
    16201 tgttcaactg aaatcattgc ggctcgactc ctttactgaa tttactgacc atcgccaagc
    16261 caaacaacaa caacaccaga ttgcacaata cgatatacca aggattttca taggtaatta
    16321 catcgctgcc aaaatatccg gcacggaaca tttctgtgcc atgcaccatc ggaatcatta
    16381 atgcatattc ttgtaccttg ggcggcaaat tatgcacaaa aaagaacgca ccggataacg
    16441 gcatcatcac aaaagtcaat gtgccccaaa tcttgccaaa cggctcgaaa ttaaaggcaa
    16501 tcgaacaaat caccaaaccc aaaccaatcg caaaaaaagc catcaaaagc caagccatca
    16561 gcatataaaa catatctgcc ggcatttcaa tccagccaat cgcaatcaat accgccataa
    16621 tcacaatctg cgcaatggtt gcaccagcaa tttccaaaat catgcgcgcc aagatggtat
    16681 ccaaaactct tacattgcgg tgataaagca agctggcatt tgaagaaatc gacccaactg
    16741 cccgttttga ggcattacgc cacatcatca acatcggata gccagtaatc gcaaatgcga
    16801 caatattcaa agttgaatat cggtctgccc ttaaaaattt ccacatcaag acgataacga
    16861 atgtcatcag caacggctca acaaacagcc ataaaaagcc aatattattg cgaccgtaac
    16921 gggtgataat ttcccgcatc aacagcgcac cgattacgcg cctttgaatg gctaaagatt
    16981 cccaaaatga tgttttatgc aaggctttca tcagttttta tgctcacgaa tgctggcagt
    17041 caacaggctc aaaataccat aaaccatcaa gccgataatc agagtggcaa caatgttgta
    17101 taaccgttta ggctcatgtg ccaaatccgg caggctcggt tgcgagatca cttccaaata
    17161 aagctgctga cggtctgctt caaccttggc actttccaaa gaagtcatgg cggctgccaa
    17221 ctgctgctct gccaactggt tttccaaata cacacgctga tattcggcag cctgattaga
    17281 caacgaagaa tgcccaccgc ccgaaatggc acgtaactgt tggtcaattt ctttacgcaa
    17341 gctctgctca cgcgcctgca aacccggaat ctgcggattc tccggagtga ctgctttcac
    17401 ctgatccagc tgggtttgaa tcacaatcaa ttcatcttgc agcttggaaa ccaaccccat
    17461 ttgcacttcc gattgcgctt tcaaatcaaa aacgccattg gcaatccggt aatccgtcag
    17521 attctgagag gcttccttta cccgctctgc cgccgttttc actacttctt ccgcatagcg
    17581 caccgtatca gcacgtgcac gatcgttcaa ctggttaatc aatgcttcac cttgttttaa
    17641 caaagcctca ttgattttct tagattccag cgcatcaaag gaagttacat tcaacgtgga
    17701 aatacccgaa accgtatcaa aattgatcat cacctgattt ttatagtatt gataaaaagc
    17761 ctcttcctcg ccacggaacc caaacccatt aaagcggctg aacgcatcac ctttggtttc
    17821 ataaaactca cgcaccggca agattttacg cagttcatcc aaagacgagc gcgaacgcat
    17881 atactcccca accgtgtaaa tatcatcttg cgcacgggca aaacctgtgc cctgcaaaat
    17941 ggcacccagg ccattgagag aagattggct tttaggcgag cgcaccacaa agctcgattg
    18001 cgacgtaaaa cgatcggaag cgaagaagcc gaaatacacc aacgaaatta ccgtagggat
    18061 aatcaccgtt acccaaaata aagggcttag ctttttaatc caacttttct ttttcggctt
    18121 tttacgctcg gctttggttt cagtggcaac tgccacagga agttgctcag acatcttact
    18181 tactcacatt aattagttaa attattaata ctgttcgcgc cactggtaac cggcgagaac
    18241 acaaacgaca aaaatttctg cacttcagcc aacggcgcat tcgacacata caatacatct
    18301 ttattcttca caggaaagcg ctgcatagaa aatagcgaat gcgcatcagc catattcaca
    18361 cgatataccg ttggaatctc tgcctcactg ccataacctt gagcaatcca tttatcctga
    18421 cgttctgccg gcaattccac caatggcgta tagcggaaca caaacacacc acgcgcatca
    18481 gaacggcgat cttgcaaacc gcccatacgg ccaatggctt cagaaagcga taagcctctg
    18541 gctgaaaaac cgatttcttg tgttctcccc accgcaccca tagacgtaaa ggtataggga
    18601 ttggtaatca tggtaaccac atcaccgcga cgcagcaaaa tattttgtcg cggatttgca
    18661 actaaatctt ccaaggcaac agttcgtact acattgccac gtgtcagctg cacattcgta
    18721 tcctgcacat ttgccgttga accacctacc gcagccaccg catccaacac acgctcaccg
    18781 gctgccgtca gcggcatacg cacactattc ccagcacgaa tcaccgacac attcgccgca
    18841 ttattctgca ccaaacgcac catcacttgt ggctgattgg ccattttttt caggcggcct
    18901 ttaataattt cctgaacctg accaggcgtt ttaccgacca ccgaaatatc gccaacaaac
    18961 ggcacagaaa ccgtaccacg tgccgtgacc aactgctctg gcaacttagt ttgatgcgca
    19021 ctacccgagc ccatcgaaga aaggccacca ccaaacaata ctgccggcgg cgcttcccaa
    19081 atcataatat ccaatacatc accaatattt agcgtaccag ccgaagcata accatcgcca
    19141 aactgagtga atgactgatt tatctgagcc ttatataata actgagcaac cgtatgattc
    19201 acatcaatca gctccacttc aggaatttga acttcagatt gttgccctaa agagacaatt
    19261 ttttttgcgc tggggcctga tgaaggaatc gcagagcatc ctacaattaa acttccacac
    19321 aataataata ctgcgtgacg aatataaaat ttcactttaa acacaagcca aatcctaata
    19381 taattataaa tggcctaatt atagcactta atcgaaataa atttatgagt acgtagagta
    19441 taattagtat tcttctttcc aacttcctta tgcctataga ttctaaaatc atgaaaagaa
    19501 ttctttgcat tacaggtacc agagccgact tcggcaagct aaaaccttta ttagcctata
    19561 ttgaaaatca cccagacctt gaattgcatt tgattgtaac tggtatgcat atgatgaaaa
    19621 catatggcag aacctacaag gaagtaactc gagaaaacta tcaacataca tatctgtttt
    19681 caaatcaaat ccaaggtgaa ccaatgggtg ccgttttagg caataccatt acgtttatct
    19741 ctcgtctatc tgatgaaatt gaacctgata tggtcatgat tcacggcgac cgtttagaag
    19801 cactagcagg cgcaactata ggtgcattaa gcagccgttt agtttgccat atcgaaggtg
    19861 gtgaactatc tggtacagta gatgactcca ttcgtcattc tattagtaaa ctttctcata
    19921 tccacttggt agcaaatgaa caagctgtca ctcgcctagt gcaaatggga gaaaaaagaa
    19981 agcatattca catcatcggc tcccccgatt tagatgttat ggcctcttcc accctcccat
    20041 ccttagaaga agtcaaagaa tattacggtt taccatacga aaattatggt atttctatgt
    20101 ttcaccccgt gactacagaa gcacatttaa tgccacaata tgcggcccaa tatttcaaag
    20161 cattagaatt aagtggccaa aatatcatta gcatctaccc taataatgac actggcactg
    20221 aaagtattct gcaagaatta ttaaaatatc aatctgataa atttattgca tttccttcca
    20281 ttcgatttga atatttttta gtcttattga aacatgctaa atttatggtc ggcaactcaa
    20341 gtgcaggtat tagagaagct cctctctacg gtgtcccttc aattgatgtt ggtacacgcc
    20401 aaagtaaccg ccatatggga aaatctatta ttcatacaga ttatgaaact aaaaatatct
    20461 ttgatgcgat tcaacaagca tgcagtttag gcaaatttga agcagatgat acctttaatg
    20521 gcggagatac tcgcaccagc acagaaagat ttgctgaagt aatcaacaat cctgaaacgt
    20581 ggaatgtttc tgctcaaaaa cgttttatcg atttgaatct ttaaattatg gaaaaacaaa
    20641 atattgcggt tatacttgcg cgccaaaact ccaaaggatt gccattaaaa aatctccgga
    20701 aaatgaatgg catatcatta cttggtcata caattaatgc tgctatatca tcaaagtgtt
    20761 ttgaccgcat aattgtttcg actgatggcg ggttaattgc agaagaagct aaaaatttcg
    20821 gtgtcgaagt cgtcctacgc cctgcagagc tggcctccga tacagccagc tctatttcag
    20881 gtgtaataca tgctttagaa acaattggca gtaattccgg cacagtaacc ctattacaac
    20941 caaccagtcc attacgcaca ggggctcata ttcgtgaagc tttttctcta tttgatgaga
    21001 aaataaaagg atccgttgtc tctgcatgcc caatggagca tcatccacta aaaaccctgc
    21061 ttcaaatcaa taatggcgaa tatgccccca tgcgccatct aagcgatttg gagcagcctc
    21121 gccaacaatt acctcaggca tttaggccta atggtgcaat ttacattaat gatactgctt
    21181 cactaattgc aaataattgt ttttttatcg ccccaaccaa actttatatt atgtctcatc
    21241 aagactctat cgatattgat actgagcttg atttacaaca ggcagaaaac attcttaatc
    21301 acaaggaaag ctaaatgcaa aacaacaacg aatttaaaat tggtaatcgt tcagtaggtt
    21361 acaaccacga accattgatt atctgtgaaa tcggcatcaa tcatgaaggc tctttaaaaa
    21421 cagcttttga aatggttgat gctgcctata atgcaggcgc tgaagttgtt aaacatcaaa
    21481 cacacatcgt tgaagacgaa atgtctgatg aggccaaaca agtcattcca ggcaatgcag
    21541 atgtctctat ttatgaaatt atggaacgtt gcgccctgaa tgaagaagat gagattaaat
    21601 taaaagaata cgtagagagt aagggtatga tttttatcag tactcctttc tctcgtgcag
    21661 ctgctttacg attacaacgt atggatattc cagcatataa aatcggctct ggcgaatgta
    21721 ataactaccc attaattaaa ctggtggcct cttttggtaa gcctattatt ctctctaccg
    21781 gcatgaattc tattgaaagc atcaaaaagt cggtagaaat tattcgagaa gcaggggtac
    21841 cttatgcttt gcttcactgt accaacatct acccaacccc ttacgaagat gttcgattgg
    21901 gtggtatgaa cgatttatct gaagcctttc tagacgcaat cattggcctg tctgaccata
    21961 ccttagataa ctatgcttgc ttaggagcag tagctttagg cggttcgatt ttagagcgtc
    22021 actttactga ccgcatggat cgcccaggtc cggatattgt atgctctatg aatccggata
    22081 cttttaaaga gctcaagcaa ggcgctcatg ctttaaaatt ggcacgcggc ggcaaaaaag
    22141 acacgattat cgcgggagaa aagccaacta aagatttcgc ctttgcatct gtcgtagcag
    22201 ataaagacat taaaaaagga gaattgttgt ccggagataa cctatgggtt aaacgcccag
    22261 gcaatggaga cttcagcgtt aacgaatatg aatcattatt tggtaaaatt gctgcttgtg
    22321 atattcgcaa aggtgctcaa atcaaaaaaa ctgatattga ataatgctta ttaacttagt
    22381 tactttatta acagaggatt ggctattaca tatagctaat tctcattaat ttttaagaga
    22441 tacaataatg ctaaagaaaa taaaaaaagc tctttttcag cctaaaaagt tttttcaaga
    22501 ttcaatgtgg ttgacaacat ctccatttta tcttaccccc ccacgtaaca atttatttgt
    22561 catatctaat ttaggtcagc ttaaccaagt ccaaagccta attaaaatac aaaaattaac
    22621 caataattta ctagtaattt tatatacttc taaaaactta aaaatgccta agttagttca
    22681 tcaatcagct aacaagaatc tatttgaatc tatttatcta tttgagcttc ctagaagccc
    22741 taataatata actcctaaaa aattacttta tatttataga agttacaaaa aaatccttaa
    22801 tattatacag cctgctcatc tctatatgct gtcttttaca ggccactact cctatctgat
    22861 tagtattgca aaaaaaaaga atattacgac tcatttaatt gatgaaggga ctggaacata
    22921 tgctccttta ttagaatcat tttcatatca tccaacaaaa ttagaacgtt atttgattgg
    22981 aaataatctt aatattaaag gatatataga ttattttgac atattgcatg tcccctttcc
    23041 tgaatatgct aaaaaaatat ttaatgcaaa aaaatataac cggttttttg cgcatgctgg
    23101 aggaataagc attaataata acattgcaaa cttacagaaa aaatatcaaa tatctaaaaa
    23161 tgactatatt tttgttagtc aacgctaccc catttcagat gatttgtatt ataagagtat
    23221 agtagaaatc ttaaacagca taagtttaca aattaaagga aagatattta ttaaactaca
    23281 cccaaaagag atgggcaaca actatgtaat gtctttattt ctaaatatgg tagaaataaa
    23341 ccctcggctg gtagttatta atgaacctcc ttttctaatt gagcccctaa tatacttaac
    23401 aaatcctaaa ggaattatag gcctggcctc tagttcttta atttatacac cattactctc
    23461 accctcaacc caatgtcttt ctattggaga gttaattatt aacttaattc aaaaatattc
    23521 aatggtggaa aacactgaaa tgatccaaga acacttagag attattaaga aatttaattt
    23581 tattaatata ctaaatgatt taaatggggt aataagtaac cctctcttta aaacagaaga
    23641 aacatttgaa acacttctta aatctgcaga attcgcatat aaatctaaaa actactttca
    23701 ggctattttt tactggcaac ttgccagcaa aaacaatatt accttattag ggcataaagc
    23761 attatggtac tacaatgcac tttataatgt aaaacaaatt tataagatgg aatattcaga
    23821 tattttttat atcgataata tctccgtaga ctttcatagt aaagataaat tgacatggga
    23881 aaaaattaaa cattattact attccgccga caatagaatt ggtagagata gataaaaata
    23941 ctatgacttc tgatctccat acgtatgctt gttttcaaaa agcagcatta agatagataa
    24001 gtgaagcttg atgagagcca tttttgtggt catcgccaag gtacacgcgg agagtaatcg
    24061 acaacagagc tgctgtattc tggcttttaa agcccagtag taaagtttat aaggctgaga
    24121 cctttgcaaa atcccccaaa atcccctaaa ttcccaccaa gacatttagg agatttctca
    24181 tgagcacctt cttccagcaa accgcccaag ccatgattgc caaacacatc gaccgtttcc
    24241 cgctattgaa gttggatcag gtaattgatt ggcagccgat cgaacagtac ctgaatcgtc
    24301 aaaaaacccg ttacctcaga gaccaccgcg gccgtcccgc ctatcccctg ttgtccatgt
    24361 tcaaagccgt cctgctcgga caatggcaca gcctctccga tcccgaactc gaacacagcc
    24421 tcatcacccg catcgatttc aacctgtttt gccgttttga cgaactgagc atccccgatt
    24481 acagcacctt atgccgctac cgcaactggt tggcgcaaga caacaccctg tccgaattat
    24541 tggaactgat caaccgccaa ctgaccgaaa aaggcttaaa agtagagaaa gcatccgccg
    24601 ccgtcattga tgccaccatt attcagactg ccggcagcaa acagcgccag gccatagaag
    24661 tcgacgagga aggacaagtc agcggtcaaa ccacactgag taaggacaaa aatgcccgtt
    24721 ggacaaagaa aaacggcctc tacaaactcg gttacaaaca acatacccgt accgatgcgg
    24781 aaggctatat cgagaaactg cacatcaccc ccgccaatgc ccatgagtgc aaacacctgt
    24841 cgcctttgct ggaaggactg cccaaaggta cgaccgtcta tgccgacaaa ggctatgaca
    24901 gtgcggaaaa ccggcaacat ctggaagaac atcagttgca ggacggcatt atgcgcaaag
    24961 cctgccgcaa ccgtccgctg acggaaacgc aaaccaaacg caaccggtat ttgtcgaaga
    25021 cccgttatgt ggtcgaacaa agcttcggta cgctgcaccg taaattccgc tatgcgcggg
    25081 cagcctattt cgggctgatt aaagtgagtg cgcaaagcca tctgaaggcg atgtgtttga
    25141 acctgttgaa agccgccaac aggctaagtg cgcccgctgc cgcctaaaag gtgccccgga
    25201 tgcctgatta tcgggtatcc ggggaggatt aagggggtat ttgggtaaaa ttaggaggta
    25261 tttggggcga aaacagctga aaacctgtgt ttgggtttcg gctgtcggga gggaaaggaa
    25321 ttttgcaaag gtctcaggct gcatttctca atgtaaaacg cgatattttc acccattatt
    25381 agggataagt agccagtggt ttacactggc tactttcata gttatgaagt actgggtctg
    25441 agtgaattca attatttccg tataaaacac agtagacatt ttactaatcg gcaaaattat
    25501 attagaagaa ttgagaacta ctgaagtcag gtaagatacc attttgcaca aatttaacgg
    25561 catccctaaa aagcattttg ggtggtattt aaaggagtac aaaatggttt taactacagt
    25621 atgcttagaa atctatagcc ttacgcgctt tatattaaat cacctttctc aaccatttag
    25681 aatcataaaa aaacttttta ggatccctaa ttaacttttt aaattttctt aaaaaaatag
    25741 ttttagttga ttctatacta ttcaccgcag ataaatattc ttggtaatca tgttgcaatg
    25801 gcacaacctg ctttaatagc ttattaaact catcagttgt aatcaccttt ttagtagcat
    25861 agcaatcaag ccaatccgga tctgctattt ttggggaagt gaaatctatt tgatcaaaat
    25921 aaactaaaac cccactacct aaaaaatgct gatttgcata ggatttagaa aagcctaagt
    25981 ctgcaacaac accaacaggg atacccttac attcagcttc aaaaagcata gtagatgaat
    26041 aagataaaca ataccccatt tcttggaagg cttgcgcggt actttttcgc tctattgtca
    26101 aattactcgg caactgaaac tgctttgcca gctctatata cgaatgttta tcctgatgca
    26161 cagtaatatc tttatctgca acccttagca aaatagtaaa ttctttctca gggtattttt
    26221 cagccaaggc aatcaatttt tttaatgtat aaattctttc ttctttttta aatgggattt
    26281 taacttggtc aataaagtaa attttctctc catgacgacc ttttgatgcg tggcgaaaaa
    26341 ttggataacc ataaagtata ttttgacaac ttaatttata ttgtttctta tattcctctg
    26401 caattctaaa atcatgctta ttattatata aaacaatatc agcccccata cgagatagaa
    26461 tacttgcctg atcaccgaat actacacctg gaaacaaggt aataatcaat ggccttgaag
    26521 caatatttaa ttgcgcattc tgcttaaaga acctttttaa caacccattt ccaaccgata
    26581 aaattactgc gtcataatat tgatgcatat tcttaataaa gtaatcatca atatgaaaaa
    26641 aaaaattgct tggtctttat ctatccctga ttctaataac tgtcgatttg aaagaatgtt
    26701 ttctcgactt ttgtggatat aaatatcaat ttgagcatct tttatctctt ttgcaacagc
    26761 atagcccgag ttaaggaacg agtcataact ggcaattagt aatacttttt tcactatttt
    26821 cccttaattc tacaccatat gaataaaatt atagtatttt accttagata tcaaatatac
    26881 ttaaccaaaa aaatctgaag aaatctactg ctacttcagg gataattatt tcattaagat
    26941 tttacaacca ttattatcaa tctatcaaag tatttttagt attttattct atgaaaaaaa
    27001 ttctcgttac cggcggcacc ggttttatcg gctcgcatac cgttgtttct ttgctgaaaa
    27061 gcggccatca agtcgtgatt ttggataacc tatgcaattc cagcatcaat atcctgccac
    27121 gcttgaaaac gattaccggc caagagattc cgttttatca aggcgatatc cgcgatcgtg
    27181 agattttgcg ccgtattttt gcggaaaacc gcattgattc ggtgattcat tttgccggct
    27241 tgaaagcggt gggtgaaagt gtggccgagc cgatgaaata ttatgataat aatgtttccg
    27301 gcagcttggt gttggcggaa gaaatggcgc gtgccggcgt atttaagatt gtgttcagct
    27361 catcggctac ggtttatggc gatccgggca aagtgcctta taccgaggat atgccactgg
    27421 gcgataccac cagcccttac ggcacatcga aatcaatggt tgagcgcatt ctcactgata
    27481 ttcaaaaagc cgatccgcgc tggagcgtga ttttgttgcg ttatttcaat ccgattggcg
    27541 cgcacgaaag tggtttgatt ggcgagcagc caaacggcat cccgaataat ttgttgcctt
    27601 atatctgcca agtggcggca ggcaaactgc cgcagttgtc ggttttcggc gatgactacc
    27661 ctaccccaga cggtacgggt atgcgcgact atatccatgt aatggatttg gcggaaggcc
    27721 atgtcgcggc aatgaaggca aaaggcggcg ttgccggcgt acatttgttc aacttgggtt
    27781 cggggcgcgc ctattccgtt ttggaaatca tccgcgcatt tgaagcggct tcgggtttaa
    27841 ccattccatt tgaaatcaaa ccacgccgtg cgggcgattt ggcgtgtttc tatgctgacc
    27901 cttcttatac gaaggcacaa atcggttggc aaactcagcg tgatttaagc caaatgatgg
    27961 aagattcatg gcgctgggta agtaatcatc cgaatggcta cgacgattaa gttgacctga
    28021 tacaggccgt ctgaaagaga tgttttcaga cggcctcttt atctgaaaaa cacacattct
    28081 gtctgctata atctgtttat attttttggc tatcctctga aatttatgag aaaaatcctt
    28141 gttaccggcg gcgcgggctt tatcggttct gccgttgtcc gtcatattat ccgaaacacc
    28201 caagattccg tcgtcaacct cgacaaactg acctacgcgg gcaatctcga atcgctgacc
    28261 gacattgccg ataatccccg ctatgctttc gagcaagtgg acatttgcga ccgcgccgaa
    28321 ctcgaccgcg tattcgcaca acaccggccc gatgccgtga tgcacttggc ggcggaaagc
    28381 catgtcgacc gctctatcgg ttcggcaggc gagtttatcc aaaccaatat cgtcggcaca
    28441 ttcaatctgc ttgaagcagc ccgcgcctac cggcaacaaa tgccgtctga acagcacgaa
    28501 gccttccgtt tccaccatat ttccaccgat gaagtctatg gcgatttagg cggcacggac
    28561 gatttgttta ccgaaaccgc gccctacgcg ccgtccagcc cctactctgc ctctaaagcg
    28621 tccagcgacc acctcgtccg cgcgtggttg cgtacttacg gcttgccgac cattgtaacc
    28681 aactgctcca acaactacgg tccttaccat tttccggaaa aactcattcc tttgatgatt
    28741 ctgaacgcgc ttgacggcaa accgctgcct gtgtacggcg acggtatgca aatccgcgac
    28801 tggctgtttg tcgaagacca cgcgcgcgca ctgtatcagg ttgttaccga aggtgttgtc
    28861 ggcgaaacct acaatatcgg cggccacaat gaaaaagcca atattgaagt cgtcaaaacc
    28921 atctgcgccc tgctggaaga actcgctccc gaaaaaccgg ccggtgtggc gcgttatgaa
    28981 gatttgatta ctttcgtaca agaccgcccc ggccatgacg tacgctacgc cattgataca
    29041 gccaaaatca gtagggaact aggctggaaa ccgcaggaaa ccttcgagtc cggcctccac
    29101 aaaaccgtgc aatggtatct ggacaacaaa acctggtggc aaaacgtatt gaacggcagc
    29161 tatcgtttgg aacgcttagg tacaggcaaa tagttttcag acggcatccc gacgcaatgc
    29221 cgtctgaaaa cccatcgcaa aggaagaaag aaaagatgaa aggcatcata ctggcaggcg
    29281 gcagcggcac gcgcctctac cccatcacgc gcggcgtatc caaacagctc ctgcccgtgt
    29341 acgacaaacc gatgatttat taccccttgt cggttttgat gctggcagga atccgcgata
    29401 ttttggtgat taccgcgcct gaagacaacg cctcttttaa acgcctgctt ggcgacggca
    29461 gcgatttcgg catttccatc agttatgccg tgcaacccac tccggacggc ttggcacagg
    29521 catttatcat cggcgaagaa tttatcggca acgacaatgt ttgcttggtt ttgggcgaca
    29581 atatttttta cggtcagtcg tttacgcaaa cattgaaaca ggcggcagcg caaatgcacg
    29641 gcgcaaccgt gtttgcttat caggtcaaaa accccgaacg tttcggcgtg gttgaattta
    29701 acgaaaactt ccgcgccgtt tccatcgaag aaaaaccgca acggcccaaa tccgattggg
    29761 cggtaaccgg cttgtatttc tacgacaacc gcgccgtcga gttcgccaaa cagctcaaac
    29821 cgtccgcacg cggcgaattg gaaatttccg acctcaacca aatgtatttg gaagacggtt
    29881 cattgtccgt ccaaatatta ggacgcggtt tcgcatggtt ggacaccggc acgcacgaaa
    29941 gcctgcacga agccgcttca ttcgtccaaa ccgtgcaaaa tatccaaaac ctgcacatcg
    30001 cctgcctgga agaaatcgct tggcgcaacg gttggctttc cgatgaaaaa ctggaagaat
    30061 tggcgcgccc gatggcgaaa aaccaatacg gccaatattt gctgcgcctg ttgaaaaaat
    30121 aatgtttgag gccgtctgaa acttttcaga cggcctttag atgaaagata aaaagatgaa
    30181 catcattgat accgccattc ctgacgtaaa actgcttgag ccccaagtct tcggcgacgc
    30241 gcgcggcttt tttatggaaa ccttccgcga cgggtggttc aaagaaaata ttgccgactg
    30301 ttcctttgtt caggaaaacc actccaaatc cggcaaaggc gtattgcgcg gcctgcacta
    30361 ccaaaccgaa aacacacaag gcaaactcgt acgcgtagtt gtcggcgaag tgttcgacgt
    30421 ggccgtcgat atgcgcgaag gttcgccgac tttcggcaaa tgggcgggcg caaccctgtc
    30481 cgcgcaaaac caatgccagc tttggatacc cgaaggcttc gcgcacgggt tttacgtttt
    30541 gagcgacacg accgaactta cctacaaatg cacggactat tacaagcctg aagccgaaca
    30601 ggttttaata tggaacgacc cggcaatcgg cataggctgg ccgcttcaaa ccgcgccgct
    30661 gctgtcgccc aaagaccttg ccggcaaaac gtgggcgcaa gccgaaaagc tccgccttac
    30721 actttcccga taaaaaatgc cgtctgaacg tttcagacgg cattttctcc gacaggctac
    30781 ctacccgcct tcagtacgcg ctgtgcaaag aaaaacatcc cggtaacgaa gaacgccaaa
    30841 cccaaccaag aagcggcggc atcccagttt tgcagattca acgcgagcgg cgcatccgag
    30901 ccgccgttgg tcacggagaa ggcaataata aacgccataa tcacaccgat caggctttca
    30961 ccgacaatca ggccggcgga gaacaaggtt ccgatgcgct cggcgttttt cagacggcct
    31021 tcacggtttt ccgctttttt accgatgatg tgtttcaaca ccgccgccaa caccgcgcct
    31081 gccacgatgg gcatattgac ggacggcggc agataaatac ccataccgac cgcaaggacg
    31141 ggcagggcaa gtttgccgcc tgatgatttt ttcaacacca aatcggcggc aatcaacacc
    31201 gcgccaatcg cgatgccggt aaagatatag acccattcga ggttgtgggc gaaaatgccc
    31261 gacgcgatgg tcgtcatcaa agtcgcttga ggggctgcca aagcctgcgc cgcgtccata
    31321 ccttcgcgcg gcattgcgcc ggtaaagccg taggcttcgt aaagcagttc caacacgggt
    31381 gaaataacca gcgcaccgac gatacagccg ataatcaggg cgacttgctg ccgccaaggc
    31441 gtggctttga gcaggtagcc ggttttcagg tcttgcaggt tgtcattgga gatcgaagcc
    31501 acgcagatta ctgccgagcc gcaaaataaa gtcagtgcca gcaaaaattt gcggtttgcc
    31561 tcatccgcca tcaaaccgcc ggattcgccc accagcagca aaaccagcga aatcacgacg
    31621 atggaaacga tgcccacgcc ggaaatcggg ctggaagacg agccgaccaa acccgccata
    31681 taaccgcagg cggcggcgac caaaaagccg atgacggaag ccaaaagcgt gcaaacgacc
    31741 accaaaagcc aagccatgcc gcccgtaatg tgcgaatcgc cgataaagtg gtaaaacgac
    31801 acgcctagaa taaacatcat agacaatacc cagaaaatca tggctttagg cgacaaatcc
    31861 tgttcagcgc gttctgtagc gggcgcaccg ccgccaaaac tcttgaacga catcttcatg
    31921 ccttccacca ttggcttgag cagcatcaaa agcgtccaaa ccgccgcgat acctatggtt
    31981 cccgcgccga tgaagcgtac tttttccttc cacagcttca tcgcaaacgc cgccatttct
    32041 atatcggaag gctgcgggat gtgcgatgaa aaatacggca cggcaatgcc ccaagcaatc
    32101 gaaatgccca acagaatggc gataccgccc gtcagtccga ccaaatagcc cgcgcccaac
    32161 aatgccagtg aaaagcccat cggcagttgg aaaattgccg taccgctttt aaaccaataa
    32221 ctcgcgctat cggcaatcac acgcagacct ccggcgcaaa agctcatcaa tcccgccaac
    32281 gcaccgccgg ccgccagctc tttgatgccg ctgccgccct gacggttatc cccttcttca
    32341 tgaccgccca ctttcaaaat ttcagcagcc gccacacctt ccggataagg caaatcgctt
    32401 ttcaccacca tcgcgtaacg cagcggaatg gtgaaaatca cccccaaaat cccgccggca
    32461 atacataaaa gcgtcgtctg ccagaacggg aaaccgctcc agtagcccgc catcagcaaa
    32521 ccgggcagga cgaagatgat ggttgaaagc gtacccgcag ccgaggcttg ggtctgcacc
    32581 atgttgtttt ccaaaatatt gctgcctttg aaaaacttta aaaccgccat cgaaatcacc
    32641 gccgccggaa tcgacgaggc aaaggtcagc ccgactttca aaccgaggta aacgttggac
    32701 gcagtaaaaa ttacagtgat caatgcaccg agtatcatgc ctcggagcgt cagttcgcgg
    32761 tattcttcta ccgaaccgga taaagattta ttcattattc ttcctttgac aacagattcc
    32821 cgcatattgt tggcaatatg tcataatgtc aagttttaaa aagaacagtt aaaaacagtt
    32881 atccaatcct atctcgtact cccttgaaaa taaaaactat tttcaagcaa acaaaaacag
    32941 tcgtatcagg gagattcccc gatacggccg cctgtttaca agcctcaaaa tcaatcaaac
    33001 aaatcgcgca gcttgtctaa aaacgatttc ttacgcggtg tttgattttc caacccggta
    33061 gaaatccgtt caaattcttc taaaagctct ttttgacggt cggtcaaatt aacaggtgtt
    33121 tcgacgataa tatggcagta caaatcgccg gtcgcgctgc tgcgtaaaga tttgactccc
    33181 ttacccttca cgcgcatcct cctgccggtt tgggtttctt tggggacggt gagcttgact
    33241 ttgccgtcca aggtcggcac ttccaactct ccgcccagag ccgccgtggc aaaactgatc
    33301 ggcagttcgc aatgcaaatt caagccgtcg cgttggaaaa tcttatgcgc ccggatgcgg
    33361 acggttacat acaaatcgcc tgcgggcgcg ccgtgcatac ccggcccgcc ttcgccgctc
    33421 aaacggatac gctgcccgtc atcgataccg gcgggaatat tgacttccac cgccttgacg
    33481 gccttattcc gccccgcgcc acggcatttg acgcaaggtt ctttaatgtg tttgccggca
    33541 ccgtggcagg tcggacaagt ctgctgcata cggaaaatcg cctgctggat atgcaccgtt
    33601 cccgaacctt tgcaagtcgg gcaggtttcc ggggatgtcc ccggtttcgc accgctgccg
    33661 ttgcagacat cgcacgattc ataagtcgga atgttgatgc gtttcttcac gccttttgct
    33721 gcttcttcaa gcgtgatttc gataccgact tgaacgtcct cgccctgata atcaggctgg
    33781 gcgcgccccg aaccgcctcc aaacatttgg ctgaaaatat ccccaaagtc aaaaccttga
    33841 gcaccgccga atcctccaaa ccctccgaag cccccctgtc cgccgccttc aaacgccgca
    33901 tggccatact ggtcgtacat agcgcgcttt tctttatcgg acaaagtttc atacgccttt
    33961 tgtacttctt taaacttctc ttccgcctct ttattgtcag gattgcggtc gggatggtat
    34021 ttcatcgcca atttacggta ggctttttta atttcttcat cggtagctgt tcttgccaca
    34081 cctagggtgg cataaaaatc ttgattgctc atcttttcat ctgattcaaa ataaaatcgt
    34141 cgataaaata agggcaacag gacaaaacac aaggtttccc gaacaaaaac cgcctttcag
    34201 acggcatttc ttctgttgtt cctttaacaa tgcgccgggt atcggcggct ttacccgtcc
    34261 ggaaattga
//
LOCUS       DBBZXU010000009        34206 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.009, whole genome shotgun sequence.
ACCESSION   DBBZXU010000009 DBBZXU010000000
VERSION     DBBZXU010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 34206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34206
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.009"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(265..1650)
                     /gene="pntB"
                     /locus_tag="ACJJDE_000365"
     CDS             complement(265..1650)
                     /gene="pntB"
                     /locus_tag="ACJJDE_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008750 - proton-translocating NAD(P)+
                     transhydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HGG7540354.1"
                     /translation="MSSGLVTAAYIVAAILFIFSLAGLSKQETAKQGCYSGIAGMAVA
                     LFVTVFSDNTHGLGWIIIAMLIGAAIGIYKAKKVEMTEMPELIALLHSFVGLAAVLVG
                     FNSYIAPGNVSHDMHTIHLVEVYLGIFIGAVTFTGSLVAFGKLNGKISSSPLQLPAKH
                     KLNALALAVSFVLLLVFVGIDGSGFILLIMTLIALAFGWHLVASIGGADMPVVVSMLN
                     SYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFVSVIAGGFGSDSG
                     TLSSGSQEIGEYREVKAADIAEMLKGANNVIITPGYGMAVAQAQYPVAEITELLRKNG
                     TEVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFPETDVVLVIGANDTVN
                     PAAQTDPNSPIAGMPVLEVWKAKEVVVFKRSMNTGYAGVQNPLFFNENSVMCFGDAKK
                     TVDDILSELKK"
     gene            complement(1730..2113)
                     /locus_tag="ACJJDE_000366"
     CDS             complement(1730..2113)
                     /locus_tag="ACJJDE_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HGG7540355.1"
                     /translation="MTFAYWCILIAYLLPLFCAAYAKKAGGFRFKDNHNPRDFLARTQ
                     GTAARAHAAQQNGFEAFAPFAAAVLTAHATGNAGQATVNTLAGLFILFRLAFIWCYIA
                     DKAALRSLMWAGGFVCTVGLFVAAA"
     gene            complement(2117..3658)
                     /locus_tag="ACJJDE_000367"
     CDS             complement(2117..3658)
                     /locus_tag="ACJJDE_000367"
                     /EC_number="7.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HGG7540356.1"
                     /translation="MKIGIPRESLSGETRVACTPATVALLGKLGFETVVESGAGLAAS
                     LDDAAYQTAGATVADKAAVWACPLIYKVNAPSEQELPLLNEGQTIVSFLWPRQNEALV
                     EALRAKKVNALAMDMVPRISRAQALDALSSMANISGYRAVIEAANAFGRFFTGQITAA
                     GKVPPAQVLVIGAGVAGLAAIGTANSLGAVVRAFDTRLEVAEQIESMGGKFLKLDFPQ
                     ESGGSGDGYAKVMSDEFIAAEMKLFAEQAKEVDIIITTAAIPGKPAPKLITKEMVESM
                     KSGSVIVDLAAATGGNCELTRPGELSVTGNGVKIIGYTDMANRLAGQSSQLYATNLVN
                     LTKLLSPNKDGEITLDFEDVIIRNMTVTRDGEITFPPPPIQVSAQPQQTSSEKAAPAA
                     KPEPKPVPLWKKLAPAVIAAVLVLWVGAVAPAAFLNHFIVFVLACVIGYYVVWNVSHS
                     LHTPLMSVTNAISGIIVVGALLQISQGNGFVTLLAFIAILIASINIFGGFAVTRRMLN
                     MFKKG"
     gene            3948..4781
                     /gene="serB"
                     /locus_tag="ACJJDE_000368"
     CDS             3948..4781
                     /gene="serB"
                     /locus_tag="ACJJDE_000368"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036424 - L-phosphoserine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase SerB"
                     /protein_id="HGG7540357.1"
                     /translation="MPHALVLQFPSAEVLPSDFPSRLPEPDCADEKRMRFIVEEGFSL
                     SEKDAALLGSRQIDHAVLPDMDFGELGLIVSDMDSTLITIECVDEIAAGVGLKDKVAE
                     ITERSMRGELDFEQSLRSRVALLAGLDERVLADVYENILKLSPGAEFLLDECKRHDVK
                     FLLVSGGFTFFTERLQQRLGFEYQHANVLEIENGRLTGRLKGRIIDAQAKADLLLEYR
                     SRLGLQPHQVLAMGDGANDILMLKETGIGVAYRAKPKVRAAADVCINFGGLERVRGLF
                     R"
     gene            4847..6070
                     /locus_tag="ACJJDE_000369"
     CDS             4847..6070
                     /locus_tag="ACJJDE_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HGG7540358.1"
                     /translation="MGRRKLWFALAAAGVIGGLVGIVLTELMHFIQHTAYGYGADGAY
                     ISFREGVARASEGRRLGVLILCGMLAGGGWWLLKRFGKPQIEIKAALKQPLQGLPFLT
                     TVFHVLLQIITVGLGSPLGREVAPREMTAAFAFAGGRRLGLDEDEMRLLIACASGAGL
                     AAVYNVPLASTLFILEAMLGVWTQQAVAAALLTSVIATAVARIGLGDVQQYHPANLTV
                     STSLLWFSAVIGPILGATAVFFQRTAQKFPFIKRDNIRIILLAVCMFALIGVISVWFP
                     EVLGNGKAGNQLTFSGLTGWQYALELAAVKWPVVLMALAAGAYGGLITPSMMLGSTVS
                     FAAAAAWNSVFPAMPSESAAVVGAAVFLGVSLKMPLTAIVFVLELTYAPLSLLLPLCI
                     GMAGALGTSGKMGFK"
     gene            6230..7810
                     /gene="purH"
                     /locus_tag="ACJJDE_000370"
     CDS             6230..7810
                     /gene="purH"
                     /locus_tag="ACJJDE_000370"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HGG7540359.1"
                     /translation="MSVIKRALISLSDKAGAVEFAQTLHKLGVEILSTGGTAKLLADA
                     GVPVIEVADYTGFPEMLDGRVKTLHPKIHGGILGRRDLDEHVAKMEEHGIGNIDLVCV
                     NLYPFAATIAKPGCTLEDAIENIDIGGPTMVRSAAKNWKHVAIVTDTADFPAIAAEME
                     ANNGALSDKTRFNLSRKAFSHTAQYDGMISNYLTSLSDDVLSGQPQIGEFPSRFNQSW
                     IKVQDMRYGENPHQRAAFYRDIYPAAGSLAAYKQLQGKELSYNNIADADAAWEAVKSF
                     DAPACVIVKHANPCGVAVAADTLTAYKLAYVTDTTSAFGGIIAFNREVDGETVKQITD
                     NQFMEVLMAPKFTAEALEIAAAKKNVRVLEVPLEAGANRFELKRIGGGLLVQTPDIHR
                     ISRADLKVVSKRQPTEQEWNDLLFVWNVAKYVKSNAIVFGKGGQTYGIGAGQMSRVDS
                     TRIAARKAQDANLDLNGACAASDAFFPFRDGVDVIAEQGIKAIIHPAGSMRDQEVFDA
                     ADEHGIAMVVTDVRHFRH"
     gene            8423..9379
                     /locus_tag="ACJJDE_000371"
     CDS             8423..9379
                     /locus_tag="ACJJDE_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7540360.1"
                     /translation="MLIHYIDIAKRNFVIAVSSLSKTKTETNNPKGIAHTIEYLKKHK
                     VALVVTESTGGLEIPAAKAIRRAGIAVIIANPRQTHQFAQSQPLTKTDAKDAKMLAFF
                     AQMMTQKEDWQTMPYQPPTEAEEVLEALVNRRNQSADMRTAEKNRLHQVHETQVGSVK
                     QLIAHFDRLIDELDKQIDDHTHTHFDGKAQVAEQIKGIGSITTATLMAMLPELGRLSH
                     KRIASLAGIAPHPRESEETKFKSRCFGGRSAVRKALYMATVVATRFKPLIRDFYQRLP
                     SEGKPYKVAVTAYMRKLLTISNARMRDYFAENDTAENGIRTA"
     gene            9427..10429
                     /locus_tag="ACJJDE_000372"
                     /pseudo
     CDS             9427..10429
                     /locus_tag="ACJJDE_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222887.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
     gene            complement(10476..12665)
                     /locus_tag="ACJJDE_000373"
     CDS             complement(10476..12665)
                     /locus_tag="ACJJDE_000373"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0032508 - DNA duplex unwinding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HGG7540361.1"
                     /translation="MIYHRIAVNVPLSDGLLTYSHSEPLPQGMRVLVPFRNKTVVGMV
                     WETDIAPDMDTARILSIQTTFLDEPPLPESWRDLLSFTSRYYHYPTGQAVFAALPQGL
                     KETRAVEMPQPPLFYALNEAGRAQTPPPARFNKKAALWDALLSGEMTMAALKQVNAQA
                     VKLIENWAEQGWIETTEAAKPVLRSCNGQASHSEFVLNADQQKASDAIQTALGRFQPF
                     LLYGITGSGKTEVYFDAMAKVLAQGRQVLFLLPEINLTPQLLKRVENRFADVPTAVLH
                     SQMAAGRRTQDYLRAMLGQAKLVIGTRLAVFTPMDDVGLIVVDEEHDGSFKQDNELRY
                     HARDLAVWRAKQSGCPVVLGSATPSLESWHKVQSGAYRLLQLTERAHTAAQLPQVDIL
                     NVGRLKLDNGFSPQALQLLKQNFEAGGMSLVYLNRRGFAPALFCGDCGHTFGCPNCSA
                     KMVLHQRVRQLRCHHCDHREPIPFKCPDCGNQDLTAVGHGTQRVEETLRAFLPKAAVV
                     RVDRDSTAHKNDWADLYRRIADNEIDILVGTQMLAKGHDFARLNLVIVLNADGSLYSA
                     DFRAPERLFAELMQVSGRAGRADKPGKVLIQTQLPEHPVFAAVKAQDYAVFAENELNE
                     RQMFAMPPFGFQTAVRADAPRVADALEFLNAAKETLAPLLPASVSQFGAAPMLMVRLA
                     ERERAQIFLESPSRQDLHRAVSLWVQVLQQNRDGKIRWSVDVDPQEA"
     gene            12804..13586
                     /locus_tag="ACJJDE_000374"
     CDS             12804..13586
                     /locus_tag="ACJJDE_000374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbC family protein"
                     /protein_id="HGG7540362.1"
                     /translation="MKTKLIKILTPFTVLPLLACGQTPVSNANAEPAAKAESAGKSVA
                     ASLKARLEKTYSAQDLKVLSVSETPVKGIYEVVVSGRQIIYTDAEGGYMFVGELINID
                     TRKNLTEERAADLNKIDFASLPLDKAIKEVRGNGKLKVAVFSDPDCPFCKRLEHEFEK
                     MTDVTVYSFMMPIAGLHPDAARKAQILWCQPDRAKAWTDWMRKGKFPVGGSICDNPVA
                     ETTSLGEQFGFNGTPTLVFPNGRSQSGYSPMPQLEEIIRKNQ"
     gene            complement(13904..15838)
                     /locus_tag="ACJJDE_000375"
     CDS             complement(13904..15838)
                     /locus_tag="ACJJDE_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MacB family efflux pump subunit"
                     /protein_id="HGG7540363.1"
                     /translation="MSLIECKNINRYFGSGENRVHILKDISLSIEKGDFVAIIGQSGS
                     GKSTLMNILGCLDTAGSGSYRIDGIETAKMQPDELAALRRERFGFIFQRYNLLSSLTA
                     RDNVALPAVYMGAGGKERSARAEKLLQDLGLASKEGNKPGELSGGQQQRVSIARALMN
                     GGEIIFADEPTGALDTASGKNVMEIIHKLHEAGHTVIMVTHDPGIAANANRVIEIRDG
                     EIISDTSKNPEIPASNVGRIQEKASWSFYYDQFVEAFRMSVQAVLAHKMRSLLTMLGI
                     IIGIASVVSVVALGNGSQKKILEDISSIGTNTISIFPGRGFGDRRSGRIKTLTIDDAK
                     IIAKQSYVASATPMTSSGGTLTYRNTDLTASLYGVGEQYFDVRGLKLETGRLFDENDV
                     KEDAQVVVIDQNVKDKLFADSDPLGKTILFRKRPLTVIGVMKKDENAFGNSDVLMLWS
                     PYTTVMHQITGESHTNSITVKIKDNANTQVAEKGLTDLLKARHGTEDFFMNNSDSIRQ
                     IVESTTGTMKLLISSIALISLVVGGIGVMNIMLVSVTERTKEIGIRMAIGARRGNILQ
                     QFLIEAVLICVIGGLVGVGLSAAVSLVFNHFVTDFPMDISAMSVIGAVACSTGIGIAF
                     GFMPANKAAKLNPIDALAQD"
     gene            complement(15904..17082)
                     /locus_tag="ACJJDE_000376"
     CDS             complement(15904..17082)
                     /locus_tag="ACJJDE_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MacA family efflux pump subunit"
                     /protein_id="HGG7540364.1"
                     /translation="MAKMMKWAAVAAVAAAAVWGGWSYLKPEPQAAYITEAVRRGDIS
                     RTVSATGEISPSNLVSVGAQASGQIKKLYVKLGQQVKKGDLIAEINSTSQTNTLNTEK
                     SKLETYQAKLVSAQIALGSAEKKYKRQAALWKENATSKEDLESAQDAFAAAKANVAEL
                     KALIRQSKISINTAESELGYTRITATMDGTVVAILVEEGQTVNAAQSTPTIVQLANLD
                     MMLNKMQIAEGDITKVKAGQDISFTILSEPDTPIKAKLDSVDPGLTTMSSGGYNSSTD
                     TASNAVYYYARSFVPNSDGKLATGMTTQNTVEIDGVKNVLIIPSLTVKNRGGKAFVRV
                     LGADGKAAEREIRTGMRDSMNTEVKSGLKEGDKVVISEITAAEQQESGERALGGPPRR
                     "
     gene            17308..17697
                     /locus_tag="ACJJDE_000377"
     CDS             17308..17697
                     /locus_tag="ACJJDE_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilin protein"
                     /protein_id="HGG7540365.1"
                     /translation="MKNVQKGFTLLELMIAVAILGILTLITYPSYKTYIRRVRLTEVR
                     TTLLHNAQTMERYYRQKGTFKTYDQTKLKQNEYFKITLSEVSPDHFTLQADPNPMTNE
                     GETCVVTLNDGGTIAASGTNQSCPGFD"
     gene            17728..17856
                     /locus_tag="ACJJDE_000378"
     CDS             17728..17856
                     /locus_tag="ACJJDE_000378"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540366.1"
                     /translation="MPSGHSFRRYLYEFAVRFFKLETCRPSSGNRPDAAPFQAVII"
     gene            17980..19026
                     /gene="adhP"
                     /locus_tag="ACJJDE_000379"
     CDS             17980..19026
                     /gene="adhP"
                     /locus_tag="ACJJDE_000379"
                     /EC_number="1.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
                     /protein_id="HGG7540367.1"
                     /translation="MKMQAVVVNKNVAGDVEIVEREVRPLEYGEALVEVEYCGVCHTD
                     LHVAAGDYGEKPGRVLGHEGIGLVKEVADGVKNLKVGDRVSIAWLFQSCGSCEYCNTG
                     RETLCRSVLNAGYTADGGMATHCIVSADYAVKVPEGLDPAQASSITCAGVTTYKAIKV
                     SSVRPGQWIAIYGAGGLGNLGVQYAKKVFGAHVVAIDINDDKLAFAKETGADLVVNAA
                     KEDAAKVIQEKTGGAHAAVVTAVSAAAFNSAVNCVRAGGRVVAIGLPPESMDLSIPRL
                     VLDGIEVVGSLVGTRKDLEEAFQFGAEGLVVPKVQLRALDEAPAIFQEMREGKITGRM
                     VIDMKKECGCGHHH"
     gene            complement(19377..22862)
                     /gene="smc"
                     /locus_tag="ACJJDE_000380"
     CDS             complement(19377..22862)
                     /gene="smc"
                     /locus_tag="ACJJDE_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0030261 - chromosome condensation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HGG7540368.1"
                     /translation="MRLTHIKLSGFKSFTDPTTIHVPGQLVAVIGPNGCGKSNVIDAV
                     RWVLGEASAKQLRGESMQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYAEVS
                     IKRQLTRQGESTYFINNQTVRRRDITDLFLGTGVGARGYAVIEQGMISRIIEARPEEL
                     RAYIEEAAGVSKYKERRKETEGRLKDTREHLQRLGDLQNELARQVEKLEKQAETAERY
                     KSLTAQLNRQQDLLDYAQWQQSLAAADKATEQHQSLQAQQDETAAQVQALNDEVHALQ
                     TAEQSQQQAVHELSNKRGVLREQIARLEEQIRHQQNLHQRIERDKQAAQAQLQRIHQE
                     QQQIRVQLEENELYVEEKQTELAEWAMQVAEHEERLPELEETQTALNAAFQTQQDEAN
                     RIRRELALKQQQLAHAEQTVAKHEERKGRLKQENQALNLPDEAETAAAQEAAALLQSR
                     QEHYEEQIIAAEEALHAAREAFQTASNRFQSLKQQHITLQAQQQALSQILSQQQEAAD
                     FWQATGHAAAPQLWQHITAPAEWQHALSVILAERLHARDVPQGFVPPEPLPQGQAAWL
                     SDGLSGGIKKSLPVQALLNQIQAQPPFQTALHHWLDGVLCAPDLSYALAHQNDLGAHQ
                     IWLTPEGHQVDKVSVLLYAKPAQESLIAQKARLDGIASELENLSPELSAAEAAFKQAE
                     AAVRSSEVQHKNLMQQQQQHTRQYSQAQQRAAELLARTNQGQIRREHIERELAQLAEE
                     QTVLQHASDGLSDDIATLQEAAAELEHQQQTAAHSRQEQQGRLKQAQLALLEANRQYG
                     LAEVAVHKLNQQKQNYQQQIARLEQQTLDWQERQQELVLAYETEFQNDEQHIKLDELT
                     ESVHTLDEEYIAVQEKLTQIQEQGREQYARVQTLQTQLPQLQAATQTALLQQQEALIN
                     AKRYHQNLTERAADLDALEALAKESPKVLNSSIGSLSQQIEALGAVNLAALQELEEAR
                     ERDGYYRSQSEDVQTAITLLEEAIAQIDDKTKARFKETFDAVNGKVQTFFPTLFGGGE
                     ATLKMIGDDLLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAPFCL
                     LDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMAEQLVGVTMQEKGVSRV
                     VAVDIKQALEMAESV"
     gene            23111..23833
                     /gene="lpxH"
                     /locus_tag="ACJJDE_000381"
     CDS             23111..23833
                     /gene="lpxH"
                     /locus_tag="ACJJDE_000381"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008758 - UDP-2,3-diacylglucosamine
                     hydrolase activity [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HGG7540369.1"
                     /translation="MKPAYFISDLHLSEKHPELTALLLRFLRSSAAGQARAIYILGDL
                     FDFWVGDDEVSELNTSVAREIRKLSDKGVAVFFVRGNRDFLIGQDFCRQAGMTLLPDY
                     SVLDLFGCKTLICHGDTLCTDDRAYQRFRKIVHRKRLQKLFLMLPLKWRTRLAAKIRR
                     VSKMEKQVKPADIMDVNAAFTARQVRAFNAERLIHGHTHREHIHHENGFTRIVLGDWH
                     NDYASILRVDGDGAVFVPLEKC"
     gene            24102..25688
                     /locus_tag="ACJJDE_000382"
     CDS             24102..25688
                     /locus_tag="ACJJDE_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HGG7540370.1"
                     /translation="MALFLSIFPIVLLIWLMVKKNSMPSYVALPITAVLIYAIKLFYF
                     GDAGMLLNATAASGLVKTLTPITVIFGAIMFNRMMETTGCIDVIRKWLATISPNPVAQ
                     LMIIGWAFAFMIEGASGFGTPAAIAAPILMSLGFNPLKVAIFTLVMNSVPVSFGAVGT
                     PTWFGFAPLNLSAEDILAIGRQTGVMHFFAGFVIPVIGLGFIVPWSEIRKNLGFVAIA
                     VFSCTIPYVALAMVNEEFPSLVAGAIGLMVSVFAANQGWGLSKDHAKDPNAEKVPFAQ
                     VAKALAPLGMLIGMLVVTRIKQLGIKGILTSKEEWFSFQLPFDLSKITVSDSLTITFG
                     NIFGQDVSASYQTLYVPAWIPFVLTVWICILLYKTKFKDAWTIYAVTFNQTKKPLLAL
                     MGALIMVQLMLVGGDNSMVKIIGKEFAAMAGEHWVYFSPYLGAIGAFFSGSNTVSNLT
                     FGPIQQQIALDTGLSVTLILALQSVGGAMGNMVCLNNIIAVCTVLDVKNSEGAIIKKT
                     VIPMAIYGVIAVVAAMIFFL"
     gene            complement(25856..26059)
                     /locus_tag="ACJJDE_000383"
     CDS             complement(25856..26059)
                     /locus_tag="ACJJDE_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HGG7540371.1"
                     /translation="MDNLNLQEISVLPENLPLYCSGPDNEQWNGHPRVFLPLCEGESG
                     SVACPYCGTRYRLDGKMPHHHYA"
     gene            26175..26672
                     /locus_tag="ACJJDE_000384"
     CDS             26175..26672
                     /locus_tag="ACJJDE_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-mimic protein DMP19"
                     /protein_id="HGG7540372.1"
                     /translation="MTALTLPEDILQQEPSVLLYTLVSAYLEHTAQTGDESLSCLSDD
                     QHTLTAFCYLDSQVEEGGFVQLIASGYGEYIFRNPLADSLRRWKIKAVPKVLDKAKAL
                     YEQHGETIETLADEGRDIPSLRKQFPDFEEWDGAYYEAAEQDLPLLAEHIRSNWETFA
                     HIGQA"
     gene            26754..27947
                     /locus_tag="ACJJDE_000385"
     CDS             26754..27947
                     /locus_tag="ACJJDE_000385"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid aminotransferase"
                     /protein_id="HGG7540373.1"
                     /translation="MFFKHIEAAPADPILGLGEAFKAETRPEKVNLGIGVYKDASGAT
                     PLVKAVKEAEKRLLESETTKNYLTIDGVADYNEQTQILLFGKDHEIIASRRAKTAQSL
                     GGTGALRIATEFAKRQLNAQTIWISNPTWPNHNAIAKAVGIQDKPYRYYDAAKHGLDW
                     DGMIEDLSQAQKGDIVLLHGCCHNPTGIDPTPEQWETLAKLSAEKGWLPLFDFAYQGF
                     GNGLEEDAYGLRVFLKHNTELLIASSYSKNFGMYNERVGAFTLVAEDEETAARAHSQV
                     KTIIRTLYSNPASHGANTIALVLKNDDLKAQWIAELDEMRGRIKAMRQKFVELLKAKG
                     ASQNFDFIIEQNGMFSFSGLTPEQVDRLKNEFAIYAVRSGRINVAGITDDNIDYLCES
                     IVKVL"
     gene            complement(28350..29285)
                     /gene="hemC"
                     /locus_tag="ACJJDE_000386"
     CDS             complement(28350..29285)
                     /gene="hemC"
                     /locus_tag="ACJJDE_000386"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HGG7540374.1"
                     /translation="MNPKKLVIASRESLLAMWQAKHIQGRLKALYPDCEVEILGMTTR
                     GDQILDKTLSKVGGKGLFVKELEQALYDGRADLAVHSIKDVPMDLPEGFALAAIGERA
                     NPFDAFVSNQYARLEEMPKGAVVGTSSLRREAQLRARYPHLLIKPLRGNVQTRLSKLD
                     NGEYDAIILAAAGLQRLELDGRIRMILSESDSLPAAGQGALGIEIAAHREDLYEVLKP
                     LNHDTTHACVTAERALARALGGSCQVPLAAYCTEENGLLTLRGLVGHPDGSVILQADA
                     QAPAEYADALGRAVAKKLADDGARELIGAVLNTEN"
     gene            29404..29919
                     /gene="ybeY"
                     /locus_tag="ACJJDE_000387"
     CDS             29404..29919
                     /gene="ybeY"
                     /locus_tag="ACJJDE_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HGG7540375.1"
                     /translation="MKRAKQYPFLSLQRQRFHLNFENASSTANLPSERDFYRWAWSAL
                     KNEYRRADISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDL
                     IICPQVVLKEAAEQGKTPERHFAHLTIHGVLHLMGYDHIEDDEAEIMEAEEIRLMLAA
                     GFPNPYQEDEY"
     gene            29921..30745
                     /locus_tag="ACJJDE_000388"
     CDS             29921..30745
                     /locus_tag="ACJJDE_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HGG7540376.1"
                     /translation="MDGTQSKPKFFERLISRLAGEPDSAEDVLTLLRQAHEQEVFDAD
                     TLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKD
                     EVLGILHAKDLLKYMFNPEQFHLKSVLRPAVFVPEGKSLTALLKEFREQRNHMAIVID
                     EYGGTSGLVTFEDIIEQIVGEIEDEFDEDDSADNIHAVSSERWRIHAATEIEDINTFF
                     GTEYSSEEADTIGGLVIQELGHLPVRGEKVLIGGLQFTVARADNRRLHTLMATRVK"
     gene            complement(30888..32267)
                     /gene="nhaC"
                     /locus_tag="ACJJDE_000389"
     CDS             complement(30888..32267)
                     /gene="nhaC"
                     /locus_tag="ACJJDE_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC"
                     /protein_id="HGG7540377.1"
                     /translation="MFAFKSLLDMPRGEALAVVVALIAAMGYTIISLEWLPHMSIIAA
                     IVVLILYGLARGLKYNDMQQGMIGALNQGMGAIYLFFFIGLMVSALMMSGAIPTLMYY
                     GFGLISPTYFYFSAFALCSVIGVSIGSSLTTCATVGVAFMGMAAAFHADMAMTAGAIV
                     SGAFFGDKMSPLSDTTGISASIVGIDLFEHIKNMMYTTIPAWLISAALMLWLLPNVAA
                     QDLNGVESFRSQLEATGLVHGYSLIPFALLVVLALMRVNAVVAMLFTVIAAVAVTYLH
                     STPDLRQLGAWFYGGYKLEGEAFKDVAKLISRGGLESMFFTQTIVILGMSLGGLLFAL
                     GAIPSLLDAVRSFLTNAGRATFSVAMTSVGVNFLIGEQYLSILLSGETFKPVYDRLGL
                     HSRNLSRTLEDAGTVINPLVPWSVCGVFISHALGVPVWEYLPYAFFCYLSLALTLLFG
                     WTGLTLSKK"
     gene            complement(32559..33782)
                     /locus_tag="ACJJDE_000390"
     CDS             complement(32559..33782)
                     /locus_tag="ACJJDE_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar MFS transporter"
                     /protein_id="HGG7540378.1"
                     /translation="MSAQSQNNHTSPLVVLTTLFFMMGFITCMNDILIPHLKEIFDLS
                     YVQAMLIQFCFFTAYAVMSIPMGAFVGKVGYKNGVIGGFLLTAVGCLLFYPAAGSHSY
                     AVFLGALFILASGVTLLQVAGNPYVTLLAKPGKESATLTLVQAFNALGTTIAPQIGAF
                     LILADATQTVSKAEQISSVQIPYLGLAGLLIILAVFVKMIRLPDARKIAAEESAHNHD
                     GKTSVWQYKHLVFGTAGIFCYVGAEVSIGSLMVNVLGYLKGLDHASAAHYLSFYWGGA
                     MVGRFLGSAVMAKFAPNRYLAFNASAAVVLLAVAMATGSGNADVAMWSLLAIGFFNSI
                     MFPTIFSLATKGLGKFTNAASGVLCTAIVGGAVVPVVQGWVADTYTLMSSFVVSVICY
                     LYIVFFAVYGYRADK"
BASE COUNT         7841 a         9610 c         9020 g         7735 t
ORIGIN      
        1 caagtggaaa aatacttggc agattatcag gcacacttgg aaaaagtgtt cggctaatta
       61 aaaatccatc ttcaacacgg agatggattt tgtttgtttc gttgattttg tgtcagtttc
      121 agatgtaggt gcttattcgg acgggccgtc tgaaaatgtt tgccccaatg caaaaaaatc
      181 actgcaaacc ttcataaacg gggtttgcag tgattttttc aaatcaaaca gattgaaaac
      241 ctgcgccgaa ttgttcagac ggcattattt tttcagttcg gacagaatgt catctacggt
      301 tttcttcgca tctccgaaac acatcacgct gttttcgttg aagaacagtg ggttttgtac
      361 acctgcgtag ccggtattca tcgagcgttt gaagacgacg acttcttttg ccttccacac
      421 ttccaacacg ggcatacccg caatcgggct gttcgggtcg gtttgggcgg cggggttgac
      481 ggtgtcgttc gcaccgatga ccaagaccac atcggtttcg gggaagtcgt cgttgatttc
      541 gtccatttcc aaaacgatgt cgtaggggac tttggcttcg gcgagcagta cgttcatatg
      601 accgggcagg cggccggcga cggggtggat gccgaagcgt acttcggtgc cgtttttacg
      661 taaaagctcg gtgatttcgg caacggggta ttgcgcttgt gcgactgcca taccgtagcc
      721 cggggtaatg atgacattgt ttgcgccttt cagcatttcg gcaatatcgg cagctttgac
      781 ttctcggtat tcccctatct cttggctgcc ggaagataat gtgccgctgt cgctgccgaa
      841 accaccggca attaccgaga caaacgagcg gttcatggct ttgcacataa tgtaggacag
      901 aatcgcgccg cttgagccga ccagcgcgcc ggtaacgatg agcaggtcgt tggagagcat
      961 gaagcctgcc gctgcggccg cccagccgga gtaggagttg agcatggaca cgaccacggg
     1021 catatctgcg ccgccgatgg aggcaaccaa gtgccagccg aatgcgaggg caatcagggt
     1081 cataatcagc aggatgaagc cgctgccgtc aatgccgaca aatacgagca gcaacacaaa
     1141 cgatacggca agtgccagtg cgttgagctt gtgtttggcg ggcagttgca gcgggctgct
     1201 gctgattttg ccgttgagtt tgccgaatgc gaccagcgag ccggtaaagg ttaccgcgcc
     1261 gatgaagatg cctaaataca cttcgaccag atggatggtg tgcatatcgt gcgaaacgtt
     1321 gcccggcgcg atatagctgt tgaagccgac caaaaccgcc gctaggccga cgaagctgtg
     1381 cagcagggca atcagttcgg gcatttcggt catttccacc tttttggctt tgtagatgcc
     1441 gattgccgcg ccgatgagca tggcgatgat gatccagccc agtccgtggg tattgtcgga
     1501 aaaaacagtt acaaaaaggg cgaccgccat accggcgata ccggaatagc agccctgttt
     1561 ggcggtttcc tgcttggaca gccccgccag cgaaaagata aataaaattg cggcaacgat
     1621 atacgccgct gttacgagtc ctgaagacat ggaaattctc cgattttcga tgatttgttt
     1681 tcaatgccgt ctgaaaaatt gacgttcgtg ttttcagacg gcatctgttt caagcagccg
     1741 cgacaaacag cccgacggtg cagacaaatc cgcccgccca catcagcgag cgcaatgctg
     1801 ctttgtcggc gatgtagcac cagataaagg cgaggcggaa caggatgaac aggccggcaa
     1861 gcgtgttgac ggttgcttgt ccggcattgc cggttgcatg tgccgtcaaa acggcggcag
     1921 caaacggtgc aaaggcttca aaaccgtttt gctgcgcggc gtgggcacgg gcggctgtgc
     1981 cttgcgtgcg cgccagaaaa tcgcgcggat tgtggttgtc tttaaaccgg aatccgcccg
     2041 cttttttggc atacgccgca caaaaaagcg gcaataggta ggcaatcaga atacaccaat
     2101 aggcgaaagt catggcttac cctttcttaa acatattcag catacgccgt gttaccgcaa
     2161 agccgccgaa gatgttgatg ctggcaatca ggatggcgat gaaggcaagc agggtaacga
     2221 agccgttgcc ttggctgatt tgcagcagcg cgccgacgac gatgatgccg gagatggcgt
     2281 tggtcacgga catcagcggg gtatgcagcg agtggctgac gttccagacg acgtagtagc
     2341 cgatgacgca ggcgaggacg aacacgatga agtggttcaa aaatgctgcg ggcgcgaccg
     2401 cgccgaccca cagcaccaac acggcggcga tgacggcggg cgcgagtttc ttccacaggg
     2461 gaacgggttt cggctccggc ttggcggcag gcgcggcttt ttcagacgac gtttgctgcg
     2521 gctgggcgga aacttgaatc ggcggaggcg ggaaggtgat ttcgccgtcg cgggtaacgg
     2581 tcatgttgcg gataatcacg tcttcgaagt ccaacgtgat ttcgccgtct ttgttcgggc
     2641 ttaacagctt ggtcaggttg accaagttgg tggcgtaaag ctgggaagac tgtccggcaa
     2701 ggcggtttgc catgtcggtg tagccgatga ttttcacgcc gttgccggtt acggacaatt
     2761 cgcccgggcg ggtgagttcg cagttgccgc ccgtcgccgc cgccaaatcg acgatgacgg
     2821 agccggattt catgctttcc accatttctt tggtaatcag cttgggcgcg ggtttgcccg
     2881 gaatggcggc ggtagtgatg atgatgtcca cttcttttgc ctgctcggca aagagcttca
     2941 tctcggcggc gataaattcg tcgctcatca ctttggcgta gccgtcgccg ctgccgcccg
     3001 attcttgcgg gaagtcgagt ttcaggaact tgccgcccat cgattcgatt tgttccgcca
     3061 cttccaagcg ggtatcgaac gcgcgtacca ctgcgccgag cgagtttgcc gtaccgatcg
     3121 ccgccaaacc cgccacacct gcaccaatca ccaaaacctg cgcgggcggc actttgccgg
     3181 cggcggtaat ttgaccggtg aagaaacggc cgaaggcgtt ggcggcttca atcacggcgc
     3241 ggtagccgct gatgtttgcc attgaagaca aagcgtccaa agcctgcgcg cgcgaaatgc
     3301 ggggcaccat atccatcgcc agcgcgttca ctttcttggc gcgcaaggct tcgaccaaag
     3361 cctcgttttg gcgcggccac aggaagctga cgatggtttg accttcgttc aaaagcggca
     3421 gttcctgttc ggacggcgcg ttgaccttat aaatcaaagg gcaggcccaa accgccgctt
     3481 tgtcggcaac ggttgcgcct gctgtttggt aagcggcatc gtccaaactt gccgccaaac
     3541 ctgcaccgct ttcgacaacg gtttcaaagc ccagtttgcc caacagggca acggtggcgg
     3601 gcgtgcaggc gacacgggtt tcgccggata atgactcgcg tgggataccg attttcatct
     3661 ctgaatcctt tttcgggttg tttatatgta tcgtgggtta aatttaaatc ggggcagggc
     3721 ggagcaacgc cgtaccggtt taaagccgac tcacttcaaa tgttaatata ttttagataa
     3781 tccccttata acgaattttc atcaggctgg caatagttgc ggcattttcc cgtgttgtcc
     3841 gacacatact gccgtttgcg tttgaagtca ttttccgatt gcagtcccgc ccgccgtaac
     3901 attctttgcc gtttcactat ataatccgca ttttttgagc cgccgttatg ccgcacgccc
     3961 tcgtcctcca atttccctcc gccgaagtcc tgccttccga cttcccctca cgcctgcccg
     4021 aacctgattg cgccgatgaa aagcgtatgc gttttatcgt tgaagaaggg ttttctttaa
     4081 gcgaaaaaga cgcggcgttg cttggcagcc gtcaaatcga ccacgccgtg ttgccggata
     4141 tggatttcgg cgaactcggt ttgattgtca gcgatatgga ttcgacgctg attaccatcg
     4201 aatgcgtcga tgaaattgcg gcaggcgtgg gtttaaaaga caaagtagcg gaaattaccg
     4261 agcgttcgat gcgcggcgaa ctcgatttcg aacagtcttt acgcagccgc gtcgcgctgt
     4321 tggcgggatt ggacgaacgg gttttggcgg atgtttatga aaacattttg aagctctcgc
     4381 ccggtgcgga atttttgttg gacgaatgca aaaggcacga tgtgaaattc ctgctggtgt
     4441 cgggcggctt cacgtttttt accgaaaggc tgcaacaacg cctcggcttc gaataccagc
     4501 acgccaatgt tttggaaatt gaaaacggca ggctgaccgg ccgtctgaaa ggtagaatca
     4561 tcgacgcgca ggcaaaggca gatttattgc tcgaataccg cagccgcctc ggattgcagc
     4621 cacatcaggt gttggcgatg ggcgacggtg cgaacgatat tctgatgctc aaagaaacgg
     4681 gcataggcgt ggcttaccgt gccaaaccga aagtgcgggc agccgccgat gtctgtatca
     4741 acttcggcgg tttggagcgt gtacgcggcc tgttcaggta ggcggatagg aaacggatgt
     4801 cgtctgaaaa acgtgttcag acggcatttg aacggcagga acgacagtgg gacgcagaaa
     4861 actttggttt gccctggcag cagcaggcgt tatcggcggt ttggtcggca ttgtgctgac
     4921 ggaactgatg cacttcatac agcatacggc atacggttat ggcgcggacg gtgcgtacat
     4981 ctcgttccgc gaaggtgtgg cccgtgcttc ggaagggcgg cgtttaggcg tattgattct
     5041 gtgcggtatg ttggcaggcg gcggctggtg gttgctcaaa cgtttcggta agccgcaaat
     5101 cgaaatcaaa gccgccttga agcagccgtt gcaggggctg ccgtttctga cgacggtttt
     5161 ccatgttctg ctgcaaatca taacggtcgg actcggttca ccgctcggac gggaagtcgc
     5221 cccgcgtgaa atgactgccg cgttcgcttt tgccggcggc aggcggttgg gtttggatga
     5281 agacgaaatg cggctgctga ttgcttgcgc ttcgggtgcg ggtttggcgg ccgtgtataa
     5341 cgtgccgctc gcctccacac tttttatcct cgaagccatg ctgggcgtgt ggacgcagca
     5401 agccgtcgcc gccgcattgc tgacttccgt catcgccacc gccgtcgcgc gcatcggctt
     5461 aggcgacgtg cagcaatatc atccggctaa ccttaccgtc agcacctcat tactttggtt
     5521 ttccgccgtc atcggcccga tactgggcgc aaccgccgtc tttttccagc gcacagccca
     5581 aaagtttccc tttatcaagc gcgacaatat tagaatcatt ctcttggcag tctgcatgtt
     5641 tgcgctcatc ggcgtgattt ccgtttggtt tcccgaagtt ttgggcaacg gcaaagcagg
     5701 caaccaactg acttttagtg gtttgaccgg ttggcaatac gctttggaac ttgccgccgt
     5761 caaatggccg gtcgtcttga tggcgctggc ggcaggcgca tacggcggac tgattacgcc
     5821 gtcgatgatg cttggcagca ccgtttcttt tgctgccgcc gccgcgtgga acagtgtttt
     5881 ccccgcaatg ccgtctgaaa gcgcggcagt cgtcggagcg gcggtgtttc tcggcgtatc
     5941 gctcaaaatg ccgctgaccg ccattgtgtt cgtattagaa ctgacctacg cgccgctgtc
     6001 cctgctgctg cctttgtgca tcggcatggc gggggcattg ggaacatcgg gaaaaatggg
     6061 cttcaaatga atgtcgacaa atgccgtctg aaaggttttc agacggcatt tctttgtaaa
     6121 ttgtcaacaa tatctgcaaa aatctactgc caaaaaactg aaaatagcgg ataataccgc
     6181 cccgaaaaag ttcccctttc cccatccaac tgtcagaaaa ggaagcccaa tgtccgtcat
     6241 caaacgtgcc ctgatcagcc tgtccgacaa ggcaggcgcg gtcgaatttg cccaaaccct
     6301 gcacaagctc ggtgtcgaaa tcctctccac cggcggcacg gcgaaactgc ttgccgatgc
     6361 gggcgttccc gtgattgaag tcgccgacta taccggcttc cccgaaatgc tcgacggccg
     6421 cgtgaaaacg ctgcatccga aaatccacgg cggtattttg ggtcggcgcg atttggacga
     6481 acacgttgcc aagatggaag aacacggtat cggcaacatc gaccttgtgt gtgtcaacct
     6541 ctaccccttc gccgccacca ttgccaagcc cggctgcacg ctggaagacg cgattgaaaa
     6601 catcgacatc ggcggcccga ccatggtgcg ttctgccgcg aaaaactgga aacacgtcgc
     6661 catcgttacc gacacagccg atttcccggc catagctgcc gaaatggaag ccaacaacgg
     6721 cgcattgagc gacaaaaccc gcttcaacct ctcacgcaaa gcattcagcc ataccgccca
     6781 atacgacggc atgatttcca actacctgac ctcgctttca gacgacgtct tgagcggcca
     6841 gccccaaatc ggcgaattcc caagtcggtt caaccaaagc tggattaaag tgcaagacat
     6901 gcgctacggc gaaaatccgc accaacgcgc cgcgttctac cgcgatattt accccgccgc
     6961 aggcagcctc gctgcataca aacaactgca aggcaaagaa ttgtcctaca acaacatcgc
     7021 cgatgccgat gccgcatggg aagccgtcaa atcctttgac gcaccagcct gtgtgattgt
     7081 gaaacacgcc aatccgtgcg gcgtcgccgt tgcagccgat acattgaccg cctacaaact
     7141 cgcctacgtc accgacacca ccagcgcgtt cggcggcatc atcgccttca accgcgaagt
     7201 ggacggcgaa accgtcaaac agattaccga caaccagttt atggaagtct tgatggcgcc
     7261 gaagtttacc gccgaagccc tcgaaatcgc cgccgccaag aaaaacgtgc gcgtattgga
     7321 agtgccgctt gaggcaggcg caaaccgctt cgaactcaaa cgcatcggcg gcggactgtt
     7381 ggtacaaacc cccgacatcc accgcatcag ccgcgccgat ttgaaagtcg tctccaaacg
     7441 ccaaccgacc gagcaggaat ggaacgattt gctgtttgtc tggaacgtcg ccaaatacgt
     7501 caaatccaac gccatcgtct tcggcaaagg cggtcaaacc tacggcatcg gcgcaggtca
     7561 aatgagccgc gtggacagca ctcgcatcgc cgctcgcaaa gcgcaagatg ccaatctcga
     7621 cctcaatggc gcatgtgccg cttccgatgc tttcttcccc ttccgcgacg gcgtagatgt
     7681 cattgccgag cagggcatca aagccatcat ccatccggca ggctccatgc gcgatcagga
     7741 agtcttcgac gcagcggacg aacacggcat cgccatggtc gtaaccgacg tgcgccactt
     7801 ccgccattaa cgcagatgaa caaggcaatg ccgtctgaag ggctttcaga cggcattttg
     7861 cgctattttg tgaaggtagg gatgacggtt cgggtattcc tgacagggtg gattttcaag
     7921 gtgttgtata gggtgtagga ggattcgtaa aaggtgggat gcagggtgtg cttcagcccg
     7981 ctgcatcaaa aatttttgga gaaccggcgg gagtcggcgg ttttggtttc ggcggggacg
     8041 gtggaaatgg gtaacattga cggaatcgac ggaagcggtg ggctgaagcc cacccttgta
     8101 tattggaatc actgtatcat agcaacaaac cgcccggccg ccacccgcgc ccacccaagg
     8161 cacacaaccg ttgcgtagca cagggagcgg cagggcaacc catcgacaca accggacagt
     8221 tgccggacaa cacaaccgaa tgcaaggcag gtttatgatg agtacccaat accattacgc
     8281 aggtatagtg aattaaatct aaaccagtac agcgttggtt cgccttagct caaagagaac
     8341 gattctctaa ggtgctgaag caccaagtga gtcggttccg tactatccgt actgtctgcg
     8401 gctcgccgcc ttgtcctgat ttttgttaat tcactatatc gacatcgcca aacgaaactt
     8461 cgtcatcgcc gtttcgtctt tgtctaaaac caaaaccgaa accaacaacc ccaaaggtat
     8521 cgcccatact atcgaatacc ttaaaaaaca caaggtcgcc ctcgtcgtga cggaaagtac
     8581 tggcggtctc gaaatccccg ccgccaaagc catccgccga gcaggcatag ccgtgattat
     8641 cgccaacccg cgtcagacgc atcagtttgc ccaatcgcag ccgctgacca aaaccgacgc
     8701 caaagatgcc aaaatgctcg ccttcttcgc acagatgatg acgcagaaag aagattggca
     8761 aaccatgccc taccaaccgc ccacagaagc ggaagaagtg ttggaagcct tggttaaccg
     8821 ccgcaaccaa tcggcggata tgcggactgc cgagaaaaac cgtctgcatc aggttcacga
     8881 aacgcaagtc ggaagcgtca aacaactgat tgcccatttt gaccggctga ttgacgaatt
     8941 ggacaaacaa atcgacgacc acacccacac gcattttgac ggcaaagccc aagtggcgga
     9001 gcaaatcaaa ggcatcggtt cgataacgac ggctacgctg atggcgatgc tgcctgagtt
     9061 ggggcggctg tcgcacaaac ggatagcgag tttggccggc attgccccgc acccgaggga
     9121 gagcgaggaa accaaattca aaagccgctg cttcggcgga aggtctgcgg tacgtaaggc
     9181 gctgtatatg gctaccgtgg tagcgacacg ttttaaaccg cttattcggg atttctacca
     9241 acgcctgccg tccgagggta agccgtataa ggttgccgtt acggcatata tgcgcaaact
     9301 gctgacgata tcgaatgccc ggatgcgtga ttattttgcc gaaaacgata ccgccgaaaa
     9361 cggtatccgg acggcttgat ttgagttttg gtatttttgc ccgacggggt gaaaaataca
     9421 gttgctatgc gcccgttttt cgtcggcgcg acagtgcttg ccatactcgg cgcgttggtg
     9481 tttttcatca gccccggtgc cgtcgtcctg caccgccaaa tcttcttaga actcatgctg
     9541 cctgcagcat atggtggttt cctgactgcg gctttgttgg actggacggg ttttttcgag
     9601 taacctgaaa cctgtcgcga ctttgatggc ggcattattg ctcgccgcat ccgctatact
     9661 gcccttttcg ccgcaaactg cctcgttttt cgtcgccgcc tattggctgg tgttgctgct
     9721 gttctgcgcc cggctgattt ggctagaccg aaacaccgac aacttcgccc tcttaatgct
     9781 gcttgccgcg ttcactgttt ttcagacggc atacgctgca accggcgatt tgaacctgtt
     9841 gcgcgcgcaa gtgcatttga atatggcggc ggtcatgttc gtatccgtcc gcgtcagtgt
     9901 ccttctgggc gcggaagccc tcaaaaaatg ccgtctgaaa gaccctgtat tcatccccaa
     9961 cgttgtctat aaaaacatcg ccatcacctt cctgctgctg cacgccgccg ccgaactttg
    10021 gctgcccgcg caaaccgccg gttttaccgc gctcgccgtc ggcttcatct tgctcgccaa
    10081 gctgcgcgaa ctgcaccatc acgaactctt acgcaaacac tacgtccgca cttattacct
    10141 gctccaactt tttgccgccg caggctattt gtggacaggc gcggcgaaat tgcaaaacct
    10201 gcctgcctcc gcgcccctgc acctgattac cctcggcggc atgatgggcg gcgtgatgat
    10261 ggtgtggctg actgccggac tgtggcacag cggctttacc aagctcgact acccgaaact
    10321 ctgccgcatc gccgtcccca tccttttcgc cgccgccgtg ttcgtgcttt acctgctgac
    10381 attcgtaccg atctttcggg cgaacgcgtt tacagacgat ccggaataaa aatgccgtct
    10441 gaaacggttt tcagacggca tcgtattgcc gataatcaag cctcctgcgg atcgacatcc
    10501 accgaccatc taattttgcc gtcgcggttt tgctgcaaca cctgcaccca caaactcacg
    10561 gcacggtgca aatcctgtcg ggacggggat tcgaggaaga tttgcgcgcg ttcgcgttcg
    10621 gcgaggcgca ccatcagcat gggggcggcg ccaaactggg aaacgcttgc gggcaacagc
    10681 ggggcgaggg tttctttggc ggcattgaga aattccagcg catcggcaac acgcggcgcg
    10741 tccgcgcgga cggcggtctg aaaaccgaag ggcggcatgg cgaacatttg ccgttcgttc
    10801 aattcgtttt cggcaaacac ggcataatcc tgcgctttga cggcggcgaa gacgggatgt
    10861 tcgggcagtt gggtctgtat caacaccttg ccgggtttgt cggcgcgccc cgccctgccg
    10921 gacacctgca tcagctcggc gaacagtctt tccggcgcgc ggaaatccgc gctgtaaagg
    10981 ctgccgtcgg cgttcaatac gataacgagg ttgagccgcg caaagtcatg gcctttggcg
    11041 agcatctgcg tgccgaccag aatgtcgatt tcgttgtcgg cgatgcggcg gtacaaatcc
    11101 gcccagtcgt ttttgtgcgc ggtgctgtcc ctgtccacgc ggacgacggc tgccttgggc
    11161 aggaaggcgc gcagggtttc ttcgacgcgc tgcgtgccgt gtccgacggc ggtcaggtct
    11221 tgatttccgc agtcggggca tttgaacggt atgggttcgc ggtggtcgca gtggtggcag
    11281 cgcagttggc ggacgcgttg gtgcagcacc attttggcgg agcagttcgg gcagccgaag
    11341 gtatggccgc agtcgccgca aaacagcgcg ggcgcgaagc cgcgacggtt gaggtacacc
    11401 agcgacatac cgcccgcttc aaaattctgt ttcaaaagct gcaaggcttg cggcgagaag
    11461 ccattgtcta gtttcagacg gcctacgttg aggatgtcca cttgcggcag ttgcgcagcg
    11521 gtatgggcgc gctcggtcag ttgcagcagg cggtacgcgc cgctttgcac cttgtgccag
    11581 ctctccaagc tgggcgtggc gctacccagc acgacggggc agccgctctg cttcgcccgc
    11641 cacaccgcca aatcgcgggc gtggtagcgt aattcgttgt cttgtttgaa cgagccgtcg
    11701 tgttcctcat cgaccacaat cagcccgaca tcatccatcg gcgtgaacac cgccagccgc
    11761 gtgccgatga ctaatttcgc ctgccccaac atcgcgcgca aataatcttg cgtgcgcctg
    11821 cctgccgcca tctggctgtg caacacggcg gtcggcacgt cggcaaaacg gttttctacc
    11881 cgcttcaaaa gctgcggcgt gaggttgatt tcgggcaaca gaaacaacac ctgccgcccc
    11941 tgagccaaca ctttcgccat cgcatcaaaa tacacctcgg tcttgccgct gccggtgatg
    12001 ccgtacagca gaaacggctg gaagcgtccc aatgccgtct gaatggcatc ggaagccttc
    12061 tgctggtcag catttaatac aaattcagag tgcgaagcct gcccattaca cgaccttaaa
    12121 acgggcttcg ccgcttccgt cgtttcaatc caaccctgtt ccgcccaatt ttcgattaat
    12181 ttcaccgcct gcgcgtttac ctgcttcaac gctgccatcg tcatttcgcc cgacagcagc
    12241 gcgtcccaca aagccgcttt tttgttgaac cgcgccggcg gcggcgtttg cgccctgccc
    12301 gcttcgttca gcgcgtaaaa caacggcggc tgcggcattt ccaccgcgcg cgtttccttc
    12361 aaaccctgcg gcagcgcggc aaacaccgcc tgccccgtcg gatagtggta ataacgcgac
    12421 gtaaacgaga gcaaatcacg ccagctttca ggcaacggcg gctcgtctaa aaaggtcgtc
    12481 tgaatactca aaatccgcgc cgtatccata tccggcgcaa tatccgtttc ccacaccatc
    12541 ccgaccacgg ttttattgcg aaaaggcaca agcacccgca ttccctgcgg cagcggctcg
    12601 gaatgggaat aagttaaaag accgtctgaa agcggcacgt ttacggcgat acggtggtag
    12661 atcatacagg caggcaaatc atttttttgc gtattttaac aggcggaagc tattttcaga
    12721 cgataaattg agcctaggcg caatgcaggc gcaacagaga tttgatacaa ttccgctttt
    12781 ccaacacgcg caatcatctt tatatgaaaa ccaagttaat caaaatcttg acccccttta
    12841 ccgtcctccc gctgctggct tgcgggcaaa cgcccgtttc caatgccaac gccgaacccg
    12901 ccgccaaagc cgagtccgcc ggcaaatccg ttgccgcctc tttgaaagcg cgtttggaaa
    12961 aaacctattc cgcccaagat ttgaaagtgt tgagcgttag cgaaacaccg gtcaaaggca
    13021 tttacgaagt cgtcgtcagc ggcagacaga ttatctacac cgatgccgaa ggcggctata
    13081 tgttcgtcgg cgaactcatc aacatcgaca cgcgcaaaaa cctgaccgaa gaacgcgccg
    13141 ccgatttgaa caaaatcgac ttcgcctccc tgcctttgga caaagccatc aaagaagtgc
    13201 gcggcaacgg caagctgaaa gtcgccgtct tctccgaccc cgattgtccg ttctgcaaac
    13261 gcttggaaca cgagtttgaa aaaatgaccg acgtgacggt ttacagcttt atgatgccca
    13321 ttgccggcct gcaccccgat gccgcgcgca aggcgcaaat cttatggtgt cagcccgacc
    13381 gcgccaaagc gtggacggat tggatgcgta aaggcaaatt cccggtcggc ggcagcatct
    13441 gcgacaatcc cgtcgcggaa accacttcct tgggcgaaca attcggcttc aacggcacgc
    13501 cgaccctcgt cttccccaac gggcgcagcc aaagcggcta cagcccgatg ccccaactgg
    13561 aggaaatcat ccgcaaaaat caataatcca tccgcaaaac aaaaggcttg gaaaattcca
    13621 agcctttttt gcgggaaatg ccgcctgaaa accaatccgc actgaaagtt atagtggatt
    13681 aaatttatag tggattaaat ttaaaccagt acagcaagcc aacaaacaca tcctaaccca
    13741 ttgaatgatt gaaaataata aattgaacaa tacgaaacac accgccgtca ttcccacgca
    13801 agtgggaatt tggaacgtag aatctaagaa accgtttttg tccaataagt ttctgctcca
    13861 aaatgaccgg ttctgcagct tcaggcggca tctttgtcca acctcaatcc tgcgccaatg
    13921 cgtctatcgg attgagtttg gccgccttgt tggcaggcat aaagccgaac gcgatgccga
    13981 ttccggtcga acaggcgacc gcgccgatga cggacatggc ggaaatgtcc atcgggaagt
    14041 cggttacaaa atgattgaac acgaggctga cggcggcgga caaacccacg ccgaccaaac
    14101 cgccgatgac gcagattaac accgcctcaa tcaaaaactg ctgcaaaata ttgccgcgcc
    14161 gcgcgccgat tgccatccgt atgccgattt ctttggtgcg ctcggtaacg gacaccagca
    14221 tgatgttcat cacgccgatg ccgccgacta ccaatgaaat cagggcgatg gaggaaatca
    14281 gcagcttcat cgtaccggtg gtgctttcga ctatctgcct gatgctgtcg ctgttgttca
    14341 tgaagaaatc ttccgtgccg tgccgcgctt tgagcagatc ggtcagccct ttttcggcaa
    14401 cctgggtatt ggcattgtct ttgattttga cggtgatgga gttggtgtgg ctctcgcctg
    14461 tgatttggtg catcaccgtc gtatagggcg accaaagcat cagcacgtcg gaattgccga
    14521 aagcgttttc gtcttttttc atcacgccga tgacggtcaa ggggcgtttc ctgaacaaaa
    14581 tggttttacc caacggatcc gagtccgcaa agagtttgtc tttgacattt tggtcgatga
    14641 cgacgacctg cgcgtcttct ttcacatcgt tttcgtcaaa cagccgcccc gtttccagct
    14701 tcagtccgcg cacgtcgaaa tattgttcgc ccacgccgta caaagaagcg gtcaggtcgg
    14761 tattgcggta ggtcagcgtg ccgccgctcg aagtcatggg cgtggcggaa gcaacgtagc
    14821 tttgtttggc gatgattttt gcgtcgtcta tggtcagggt tttaatcctg ccgctgcgcc
    14881 tgtcgccgaa gccgcgcccc gggaagatgc tgatggtgtt cgtccctatc gaactgatgt
    14941 cttcaaggat ttttttctgc gaaccattgc ccaatgcgac gacggagaca accgaagcga
    15001 taccgatgat gatgccgagc atcgtcagaa gcgaacgcat tttgtgcgcc aatactgctt
    15061 gcaccgacat tctgaaggct tcgacaaact ggtcgtaata aaacgaccac gaggcttttt
    15121 cctgaatcct cccgacattg cttgcgggga tttctggatt tttcgaggtg tcggaaatga
    15181 tttcgccgtc ccggatttcg atgacgcggt tggcattggc ggcgatgccg gggtcgtgcg
    15241 tgaccataat gacggtatgc ccggcttcgt gcagcttatg gatgatttcc atcacgtttt
    15301 tgccgctggc ggtatcgagc gcgccggtcg gctcgtcggc gaagatgatt tctccgccgt
    15361 tcatcagggc gcgggcgatg gagacgcgct gctgctgtcc gcccgagagt tcgccgggct
    15421 tgttgccctc tttgcttgcc aaacccaaat cctgcaacaa cttctccgca cgcgcggaac
    15481 gctctttgcc gcccgcgccc atatacacgg ctggcagcgc gacgttgtcc cttgcggtca
    15541 gcgagcttaa gaggttgtag cgttggaaga tgaaaccgaa gcgttcgcgg cgcaatgccg
    15601 ccagctcgtc aggctgcatt ttggcagttt cgatgccgtc gattcggtac gaaccggaac
    15661 cggcggtatc caaacagccg agtatgttca tcagcgtgga cttgcccgaa ccggactgcc
    15721 cgatgatggc gacaaaatcg cccttctcta tcgacaggct gatgtctttc aaaatatgga
    15781 cgcggttctc gccgctgccg aaatagcggt tgatgttttt acattcgatc aagctcataa
    15841 tattccgtaa atcaataaca aatgccgtct gaaaccgttt ccgtgttcag acggcatatt
    15901 cgtttatcgg cgcggcgggc cgcctagggc gcgttcgccg ctttcctgct gctcggcggc
    15961 ggttatttcg gagatgacca ctttatcccc ctctttcaac ccgcttttta cttcggtatt
    16021 catactgtct ctcataccgg tccggatttc gcgttccgcc gccttgccat ccgcacccaa
    16081 cacgcgcaca aacgccttgc cgccgcgatt tttcacggtc agcgacggaa taatcagcac
    16141 atttttcacg ccgtcgattt caaccgtatt ctgcgtcgtc atccccgtgg cgagtttgcc
    16201 gtccgaattc ggcacaaacg aacgggcata atagtagacc gcattggaag ccgtatccgt
    16261 actgctgttg tagccgcccg acgacatcgt ggtcagcccg gggtcgacgc tgtcgagctt
    16321 cgccttaatc ggcgtatccg gttcggacaa aatcgtaaac gaaatatcct gccccgcctt
    16381 caccttggta atatcgccct cggcaatctg cattttgttc aacatcatat ccagattcgc
    16441 caattggaca atcgtcggcg tagactgcgc cgcgttcaca gtctgcccct cttccacgag
    16501 aatcgctacc accgtgccgt ccatcgttgc ggtaatgcgc gtgtagccca attccgactc
    16561 ggcggtattg atggaaattt tgctctgtct gattagagcc ttcagctcgg caacattggc
    16621 tttggcggcg gcaaacgcat cctgcgcgct ttccaaatcc tctttggaag tcgcgttttc
    16681 cttccataac gccgcctgac gcttatattt cttctccgcg ctgcccaatg caatctgtgc
    16741 cgacaccagc ttcgcctgat acgtttccaa cttggatttt tccgtattga gcgtattggt
    16801 ctgcgaggtc gaattgattt ccgcaatcaa atcgcccttt ttaacctgtt gcccgagttt
    16861 gacataaagt ttcttaatct gccccgatgc ctgcgcgccg accgatacca ggttggacgg
    16921 cgaaatctcc cctgttgcag aaaccgtccg gctgatgtcg ccgcgcctga ccgcttccgt
    16981 aatataagca gcctgcggct cgggcttcag ataagaccat ccgccccaaa ccgctgccgc
    17041 cgcgaccgcc gcaacagccg cccatttcat catttttgcc atgttttcaa ttctctgtat
    17101 gcgtcaatcc cataaatcgg aagcggattc taccgcaagt ccctgcccca tccaaggcgg
    17161 caaactgccg acaataaaaa taaccatttg ttttaaatgg cttatacaat ctgctttccc
    17221 gaaaatttca atccgtttac atattccgcc atttccgata cggcgttata atgtcgccga
    17281 ccgacaaaca aatggaaaca cattgctatg aaaaacgttc aaaaaggctt tacgctgctc
    17341 gagctgatga ttgccgtcgc catcctcggc atcctgacgc tcatcaccta cccttcctat
    17401 aaaacctaca tccggcgcgt ccgcctgacg gaagtcagga cgaccctgct gcacaacgcg
    17461 cagaccatgg aacgttacta ccgccaaaaa gggacgttta aaacctacga ccaaaccaaa
    17521 ctgaaacaaa acgaatattt caagattacc ttaagcgaag tcagccccga ccacttcacc
    17581 cttcaggccg accccaatcc gatgaccaac gaaggcgaaa cctgcgtcgt tacgctcaac
    17641 gacggcggta ccattgccgc ttccggtaca aaccaatcct gccccggctt cgactaatcc
    17701 tccgccgaag cccgcaaacc cgtaaagatg ccgtccggac acagcttcag acggtatctt
    17761 tacgagtttg ccgtccggtt tttcaaactt gaaacctgcc gcccctcatc cggcaaccgc
    17821 cccgatgccg cgcctttcca agctgttata atataacata taatctatat ttttcaacaa
    17881 cataccactt gacctgtgag atgcggaagc gtatgcttac ccttatatcg gacaacattc
    17941 cgtttacagg tttttttgcc gtaactaagg agcgcaatca tgaaaatgca ggcagttgtt
    18001 gtgaataaaa atgtagcggg cgatgtggaa atagtcgaac gcgaggttcg cccgttggaa
    18061 tacggcgagg cgttggtcga agtcgaatat tgcggcgtgt gccacaccga cctgcacgtt
    18121 gcggcaggcg actacggcga aaaaccgggc cgcgtgctgg gacacgaggg catcggtttg
    18181 gttaaagaag ttgccgacgg tgtgaaaaat ctgaaagtcg gcgaccgcgt cagcatcgcc
    18241 tggctgttcc aaagctgcgg ttcttgcgaa tactgcaata ccggccgcga aaccttgtgc
    18301 cgctctgtat tgaacgctgg ctatactgcc gacggcggca tggcgaccca ctgtatcgtg
    18361 agtgccgatt acgcggtcaa agtccctgaa ggtttggatc ctgcgcaagc ttcgagcatt
    18421 acttgtgccg gcgtgaccac ttataaagcc attaaagttt ccagtgttcg tccgggacag
    18481 tggattgcca tctacggcgc gggcggtttg ggcaacttgg gggtccaata cgcgaaaaaa
    18541 gtattcggcg cgcacgttgt cgccatcgac atcaacgacg acaaactggc gtttgccaaa
    18601 gaaaccggcg cggatttggt tgtcaacgcc gccaaagagg acgctgccaa agtgattcag
    18661 gaaaaaacag gcggcgcaca cgctgcggtc gtaaccgccg tatctgctgc cgcattcaac
    18721 tctgccgtga attgcgtccg cgcgggcgga cgtgtggttg ccatcggact gccgccggaa
    18781 tcgatggatt tgtccatccc gcgtttggtt ttggacggca tcgaagtggt cggctctttg
    18841 gtcggcacgc gcaaagattt ggaagaagcc ttccaattcg gcgcggaagg tttggttgtg
    18901 ccgaaagtcc aactgcgtgc tttggatgaa gcacccgcca ttttccaaga aatgcgcgaa
    18961 ggcaaaatca ccggtcgtat ggtaatcgat atgaaaaaag aatgcggctg cggccaccac
    19021 cactgatttg acgtggcgat acacatcgaa atgccgtctg aacgctgttc agacggcatt
    19081 ttttatggat ttggatttga ttttaatctg ttctgtttga aataccgtct gaaaaccctt
    19141 atcgcaacac gtcattatag tggattaaca aaaatcagga caaggcggcg agccgcagac
    19201 agtacaaata gtacggaacc gattcactcg gtgcttcagc accttagaga atcgttctct
    19261 ttgagctaag gcgagccaac gctgtaccga tttaaattta attcactata ccgtctgaca
    19321 acccgtatcg caacacttca ttaaaaacgg caagattcag ccgttctgca acccgttcaa
    19381 acggattccg ccatttccaa cgcctgtttg atgtccacgg cgacgacgcg cgatacgcct
    19441 ttttcctgca tggttacacc gaccagctgt tccgccattt ccatggtcag gcggttgtgg
    19501 gagatgtaga gaaactgggt ttgcgccgac atttctttga ccaggttgca gaaacgcgaa
    19561 gtgttggcat cgtctagcgg agcgtcgact tcgtccaaaa gacagaacgg agcggggttg
    19621 aggctgaaca gggcgaacac gaggctcatc gcggtaaggg ctttttcgcc gccggaaagg
    19681 aggtggatgg tgctgttttt cttgccgggc gggcgcgcca tgatagacac gccggcggtc
    19741 aaaaggtcgt cgcctatcat tttgagggtg gcttcgccgc cgccgaacag ggtcgggaag
    19801 aaggtttgga ctttgccgtt gacggcgtcg aaggtttctt tgaaacgcgc tttggttttg
    19861 tcgtcgattt gggcgatggc ttcttccaaa agggtgatgg cggtctgcac gtcttcgctt
    19921 tggctgcggt agtagccgtc gcgttcgcgc gcttcttcga gttcttgcag ggcggcgagg
    19981 ttgaccgcgc cgagggcttc gatttgttgc gagaggctgc cgatgctgct gttcaatact
    20041 ttcggcgatt ctttcgccaa cgcttcgagc gcatccaaat cggcggcgcg ttcggtcagg
    20101 ttttgatggt agcgtttggc gttgatcagg gcttcctgtt gttgcaacag ggcggtttgg
    20161 gtggcggcct gaagctgtgg caactgggtt tgcagggttt gtacgcgggc gtattgttcc
    20221 ctaccctgct cctgaatctg cgtgagtttt tcctgcacgg cgatgtattc ttcgtccagc
    20281 gtgtgtacgg attcggtcag ctcgtcgagc ttgatgtgct gctcgtcgtt ttggaactcg
    20341 gtttcatagg cgaggacaag ctcttgctgg cgttcctgcc agtctagggt ttgctgttcg
    20401 agtcgggcga tttgctgctg gtagttttgt ttttgctggt tgagtttgtg gacggcgact
    20461 tcggcaagcc catattggcg gttggcttcc agcagggcaa gctgcgcctg tttcagacgg
    20521 ccttgctgct cttggcggct gtgtgcggcg gtttgctgct ggtgttcgag ttcggcggcg
    20581 gcttcctgca aagtagcaat gtcgtctgaa agcccgtcgg acgcgtgttg caacacggtc
    20641 tgctcttccg ccaactgcgc cagttcgcgc tcgatgtgtt cgcggcggat ttgcccttgg
    20701 ttggtacgcg ccagaagttc ggcggcgcgt tgctgcgctt ggctgtattg gcgcgtgtgc
    20761 tgctgttgct gctgcatcag gtttttatgc tgcacttcgg acgagcgcac ggcggcttcc
    20821 gcctgtttga acgcggcttc ggcggcagaa agttcggggg agaggttttc cagttcggac
    20881 gcgatgccgt cgaggcgcgc tttttgggca atcaggcttt cctgcgcggg tttggcatag
    20941 agcaggacgc tgaccttatc gacctgatgg ccttcgggcg tgagccagat ttgatgtgcg
    21001 cccaaatcgt tttgatgcgc gagggcgtaa ctcaaatcag gcgcacacaa tacgccgtcg
    21061 agccagtggt gcaatgccgt ctgaaacggc ggctgcgctt ggatttggtt cagcaatgcc
    21121 tgtacgggca gggatttttt gatgccgccg gagagaccgt ctgaaagcca cgccgcctgc
    21181 ccctgcggca aaggttcggg cggtacgaaa ccttgcggca cgtcgcgggc gtgcaggcgt
    21241 tcggcaagga tgacggacag ggcgtgctgc cactcagcag gcgcggtaat gtgttgccac
    21301 agttgcggcg cggcggcgtg gccggttgcc tgccagaaat cggctgcttc ctgctgttgc
    21361 gacaggattt gcgacaacgc ctgctgctgc gcctgcaagg tgatgtgttg ctgcttcagg
    21421 ctttggaagc ggtttgaggc cgtctgaaac gcctcgcggg cggcgtgtaa ggcttcttcg
    21481 gcggcgatga tttgttcttc gtaatgctct tgccggcttt gcaacaaggc agcggcctcc
    21541 tgcgcggcgg cggtttccgc ttcgtcgggc aggttcaggg cttggttctc ctgtttcaga
    21601 cggcctttgc gctcttcgtg cttggcaacg gtttgttcgg catgggcaag ctgctgctgc
    21661 ttcaacgcca gttcgcggcg gatgcggttt gcctcgtcct gctgggtttg gaaggcggca
    21721 ttgagcgcgg tttgggtttc ttccaattcg ggcagacgct cttcgtgttc ggcaacctgc
    21781 atcgcccact ccgccagctc ggtttgcttt tcttcgacgt ataactcgtt ttcttcaagc
    21841 tgcacgcgga tttgctgctg ctcttgatga atacgctgca actgcgcctg cgccgcctgc
    21901 ttgtcgcgtt cgatgcgttg gtgcaggttt tgctgatggc ggatttgttc ttccaaacgg
    21961 gcaatctgct cgcgcaacac gccgcgtttg ttgctcaatt catgcaccgc ctgttgctgc
    22021 gactgttcgg cggtctgcaa ggcgtgtact tcgtcgttta acgcctgaac ctgcgcggcg
    22081 gtttcgtcct gctgcgcctg caaagactga tgctgctcgg tcgccttgtc ggcggcggca
    22141 agcgattgct gccattgggc gtaatcgagc aaatcctgtt gccggttcaa ctgcgcggtc
    22201 agggatttgt agcgttcggc ggtttccgcc tgtttctcca gcttttccac ctgacgcgcc
    22261 aattcgttct gcaaatcgcc caaacgctgc aaatgctcgc gcgtgtcttt cagacggcct
    22321 tccgtctcct tgcggcgttc cttatatttg gacacacctg ccgcctcctc gatataggcg
    22381 cgcaattcct ccggccgcgc ttcgatgatg cgcgaaatca tcccctgctc gataacggca
    22441 taaccgcgcg cgcccacgcc cgtacccaaa aataaatcgg taatgtcgcg gcggcgcacg
    22501 gtctgattat tgatgaaata agtcgattcg ccctgacgcg tcagctgccg cttgatactc
    22561 acctcggcat actgccccca cgccccctgc aaactgtggt cgctgttgtc aaacaccagc
    22621 tccaccgaag ccctcggcgc aggacggcgc gtcgccgcac cgttaaaaat cacgtcctgc
    22681 atactctcgc cacgaagctg cttcgccgaa gcctcgccca acacccagcg caccgcgtca
    22741 atcacattcg acttgccgca gccgttcggc ccgataaccg caacaagctg ccccggaaca
    22801 tgaatcgtgg tcgggtcggt aaaagatttg aagccggaga gtttgatgtg ggtcaggcgc
    22861 ataatggtcg gaaaaaataa aaaagaagcg tattttaacg gaaatcccgc cgcaccaccc
    22921 catatcttgc cggcaaaacc ttaccgcatc ccgcacccgc gatgccgtct gaagccttca
    22981 gacggcattt ttaacgcgcc cgaaccccgg ttccgccaat gcccgatgct tggcgcggca
    23041 tttgccgtat tgccccgccg ccgggcgcgt tataatccgc cccgacatcc gcccgattgg
    23101 aaacctgcct atgaaacccg cctatttcat ctccgacctg catttgagcg aaaagcaccc
    23161 cgaactgacc gcgctgctgc tgcgtttttt acgttcttcc gccgccgggc aggcgcgggc
    23221 gatttatatt ttgggcgatt tgtttgattt ttgggtgggc gatgacgaag tttccgagtt
    23281 gaatacttcg gttgcgcggg aaatcaggaa attgtccgac aaaggcgttg ccgtgttctt
    23341 cgtcaggggc aaccgcgact tcctgatcgg tcaggatttt tgccggcagg cgggtatgac
    23401 gctgctgccg gattactcgg ttttggactt gttcggctgc aaaaccctca tctgccacgg
    23461 cgacactctg tgtacggatg acagggcata ccaacgtttc cgcaaaatcg tgcatcggaa
    23521 gcggctgcaa aaactgttcc tgatgctgcc cctgaagtgg cgcacgcgcc ttgccgccaa
    23581 aatcaggcgc gtcagcaaaa tggaaaaaca ggtcaagccc gccgatatta tggatgtcaa
    23641 tgccgccttt accgcgcggc aggttcgcgc ctttaacgcg gaaaggctga tacacggaca
    23701 cacccaccgc gagcatatcc atcacgaaaa cggctttacc cgcatcgttt tgggcgactg
    23761 gcataacgac tatgcttcaa tcctccgcgt ggacggggac ggcgcggtat tcgtgccgct
    23821 ggaaaaatgc tgaaaatgcc gtctgaagcc tttcgggcgg ctttttttac acgccccttt
    23881 cccacactcc ctccgccgca tcatcaccat ccttaacccg cattaatggg cgttatcgat
    23941 aaaatgcttg accgattaca taagattacg taaagtgtgc aaacgcataa caattggtct
    24001 taccaattta tcttttaacc aaaatatcgg gtgtacggga tttgaacgtc tttccaaacc
    24061 tcgacgcgcc ttatgatgca aatgcctaaa aaggattcgt tatggcactt ttcctcagca
    24121 tattccccat cgtcctgctg atttggctga tggtgaaaaa aaacagtatg ccctcctacg
    24181 tcgcgctgcc gattaccgca gtgctgattt acgccatcaa acttttctac ttcggcgatg
    24241 cgggcatgct gctcaacgcc accgccgctt ccggcctcgt caaaacgctc acgccgatta
    24301 ccgtgatttt cggcgcgatt atgttcaacc gtatgatgga aaccacgggc tgcattgatg
    24361 tcatccgcaa atggctggcg accatcagcc ccaaccccgt agcgcaactg atgattatcg
    24421 gctgggcttt tgcctttatg attgaaggcg catccggctt cggcacgcct gccgcgattg
    24481 ccgcgccgat tctgatgagc ttgggcttca acccgttgaa agtggcgatt ttcactttgg
    24541 tgatgaactc cgtccccgtc tctttcggcg cggtcggtac gccgacctgg ttcggtttcg
    24601 caccgctgaa cctgagtgcc gaagacatcc tcgccatcgg caggcagacc ggcgtaatgc
    24661 acttcttcgc aggtttcgtc atccccgtca tcggcttggg cttcatcgta ccttggtctg
    24721 aaatccgcaa aaacttgggc ttcgtcgcca ttgccgtctt ctcctgcacc attccttatg
    24781 tcgcattggc gatggtcaac gaagaattcc cgtcgctcgt cgccggcgcg atcggcctga
    24841 tggtgtccgt attcgccgcc aaccaaggct ggggcttgag caaggaccac gccaaagacc
    24901 cgaatgccga aaaagtgccg ttcgcccaag tcgccaaagc actcgcccct ttgggtatgc
    24961 tgatcggcat gctggtggtt acgcgcatca aacagctcgg tatcaaaggc attttgacca
    25021 gcaaagaaga atggttcagc ttccaactgc cgtttgattt gtccaaaatc accgtcagcg
    25081 actccctgac gattaccttc ggcaatattt tcggacaaga tgtcagcgcg tcttaccaaa
    25141 cgctgtacgt cccggcttgg attccgtttg tgctgaccgt ttggatttgc atcctgctgt
    25201 ataaaaccaa attcaaagat gcctggacga tttatgccgt aaccttcaat caaaccaaaa
    25261 aaccgctgct tgccctgatg ggcgcgctga ttatggttca gctgatgctg gtcggcggcg
    25321 acaattcgat ggtgaaaatc atcggtaagg aatttgccgc aatggcgggc gaacactggg
    25381 tttatttctc gccgtatctg ggcgcgatcg gtgcgttctt ctccggctcc aacaccgtgt
    25441 ccaacctgac tttcggcccg attcagcagc aaatcgcctt ggataccggc ctgtccgtta
    25501 ccctgattct ggcgttgcag tccgtcggcg gcgcgatggg caatatggtg tgcctcaaca
    25561 acatcatcgc cgtatgtacc gtattggatg tgaaaaattc cgaaggtgcg attatcaaga
    25621 aaaccgttat cccgatggcg atttacggcg tgattgccgt cgtcgcggca atgattttct
    25681 tcctctaggc gaaacgccac catccatagc ggcagcacgc ggggaacgga aaccgccgtt
    25741 ccccgtctgg gcggcgcgtc gggcagaatc ccggtgccgg aacagcccgc cccgccaaac
    25801 aaatgccgtc tgaaaccgga aaaggcttca gacggcattt ttccgccgtt tgcattcagg
    25861 cgtaatgatg atgcggcatc ttgccgtcaa ggcggtagcg cgtgccgcaa tacgggcagg
    25921 caacgctgcc cgattctcct tcgcacaaag gcaaaaacac tctcggatgc ccgttccact
    25981 gctcgttgtc gggtcccgag caatacagcg gcagattttc cggcaacacg gaaatttcct
    26041 gcagattcag attgtccatt tgattttcct ttgcgtggtt ggcgtgcgcc cattttacgc
    26101 catcggcagg ctaaaggata ttttcggcgc aaagccgcaa tccgctataa tccccacttt
    26161 tcagacggca taccatgact gcgcttaccc ttccggaaga catcctccaa caagaaccat
    26221 ccgttctgct ctataccctc gtttccgcct acctcgaaca caccgcccaa accggcgacg
    26281 aatccctctc ctgcctgtcc gacgaccagc acacgctgac cgcattctgc tacctcgaca
    26341 gccaagtcga agaaggcggc ttcgtgcaac tcatcgcctc cggttacggc gaatatattt
    26401 tccgcaaccc gcttgccgac agcctgcgcc gctggaaaat caaagccgtg ccgaaagtct
    26461 tggacaaagc caaagccctc tacgaacaac acggcgaaac catcgaaacg cttgccgacg
    26521 aagggcggga catcccttcc ctgcgcaaac agttccccga ctttgaagaa tgggacggcg
    26581 catactacga agccgccgaa caagacctgc ccctgcttgc agaacacata cggtcaaact
    26641 gggaaacctt cgcccatatc gggcaggcgt gattgcgtct gtttccagcc cgtgtaaaac
    26701 agcgtaaaat cggcaaaccc gaatgacctt ccgtccccat caaggagcaa gctatgttct
    26761 tcaagcacat cgaagccgcc cccgccgatc cgattctcgg tttgggcgaa gcattcaaag
    26821 ccgaaacccg ccccgaaaaa gtcaacctcg gcatcggcgt ttataaagac gcatccggcg
    26881 cgacacccct cgtcaaagcc gtcaaagaag ccgaaaaacg cctgttggaa agcgaaacca
    26941 ccaaaaacta cctcaccatc gacggtgttg ccgactacaa cgagcaaacc caaatcctgc
    27001 tgtttggcaa agaccacgaa atcatcgcca gccgccgcgc caaaacagcg caaagccttg
    27061 gcggtacagg cgcattgcgt attgcgaccg agtttgccaa acgtcagttg aacgcgcaaa
    27121 ccatctggat ttccaatccg acttggccaa accacaacgc catcgccaaa gcggtcggta
    27181 tccaagacaa accttatcgt tactatgatg ccgccaaaca cggtttggat tgggacggta
    27241 tgattgaaga cttgagccaa gcgcaaaaag gcgacatcgt cctgctgcac ggctgctgcc
    27301 acaaccctac cggcatcgac cctacgcccg aacaatggga aactctggca aaactttctg
    27361 ccgaaaaagg ctggctgccg ctgtttgact ttgcctacca aggcttcggc aacggtttgg
    27421 aagaagatgc ctacggcttg cgcgtgttct tgaaacacaa tacagaattg ctgattgcca
    27481 gctcttattc caaaaacttc ggtatgtaca acgagcgcgt cggcgcgttc actttggtgg
    27541 ccgaagatga agaaacagca gcccgcgccc acagccaagt caaaaccatc atccgtacct
    27601 tgtattccaa cccggcttca cacggtgcga acaccattgc gctggtgttg aaaaatgatg
    27661 atttgaaagc acaatggatt gccgaactcg atgaaatgcg cggccgcatc aaagccatgc
    27721 gccaaaaatt tgtcgagttg ctcaaagcca aaggtgcaag ccaaaacttt gatttcatta
    27781 tcgaacaaaa cggtatgttc tctttcagcg gattgactcc cgaacaagtc gaccgtttga
    27841 aaaacgagtt tgccatttat gccgtccgct ccggccgcat caacgttgcc ggcattaccg
    27901 acgacaacat cgattatctg tgcgaaagca tcgtgaaagt cttgtaaaac aaaagcgcat
    27961 acgaaatgcc gtctgaacct taaccagttc agacggcatc tgttttttgt taaaaaacaa
    28021 taaaccataa caatttcaaa caagctaaaa acatctataa aatcaaccca atatgatgaa
    28081 ctcaaataaa aaatacgaat atcatcattc tcaaattcaa aatttgaacg ccacagtatt
    28141 atccgaagcc acaaaaacct ttccgccgtc attcccgcgc aggcgggaat ccgggaaccc
    28201 aatgctgcaa gaattgatta gaaacaactg aaaccgagca aactggattc ccgcctgtgc
    28261 gggaatgacg aaataaggcg agtaaaactg atgaaacaaa ttgattaaaa acaataactt
    28321 atattatttt atttaaattt tcgataaaat caattttccg tattcaatac tgctccaatc
    28381 aattcccgcg caccgtcgtc cgccaatttc ttagcgacag cgcgtccgag cgcgtcggca
    28441 tattcggcag gggcttgcgc gtccgcctgc aaaatgaccg aaccgtcggg gtgtccgacc
    28501 agtccgcgca aggtcagcaa gccgttttct tccgtgcaat atgcggccaa aggcacttgg
    28561 cagcttccgc ccaaagcgcg cgccaaagcg cgttcggccg taacgcaggc gtgtgtggta
    28621 tcgtggttta gcggttttaa aacctcatac aaatcttcgc ggtgcgcggc aatttcgata
    28681 cccaatgcgc cttgtccggc ggcaggcagg ctgtcggatt ccgacaaaat catgcggatg
    28741 cgtccgtcca attccagacg ctgcaaaccg gcggcagcca agataattgc gtcgtattcg
    28801 ccgttatcga gtttagacaa acgggtttgc acattgccgc gcaaaggttt gataagcaaa
    28861 tgcggatagc gcgcacgcaa ctgggcttcg cggcgcaggc tggatgtgcc tacgacggcg
    28921 cctttgggca tttcttccaa acgcgcgtat tggttggaca caaacgcgtc aaacggattg
    28981 gcgcgttcgc cgatggctgc aagcgcgaaa ccttcaggca aatccatcgg cacatcttta
    29041 atcgaatgca cggccaagtc agcgcgcccg tcatataaag cctgttccaa ctctttgaca
    29101 aacaagccct taccgccgac ttttgacaaa gttttgtcca aaatctggtc gccgcgcgtg
    29161 gtcatgccca aaatctcgac ttcgcaatcg ggatacaggg ctttcagacg gccttggata
    29221 tgctttgcct gccacatggc aagcaggctt tcgcgactgg cgataacgag ttttttcggg
    29281 ttcataatgg ttgcctgaaa gatggaaaac ggcatgaagt ctatcatatt ttgggcggtc
    29341 tttcagacgg catgagggtg aatatgttat atttacgcct aaaaaccaaa ttttccggac
    29401 aacatgaaac gcgccaaaca atatcctttt ttatccttac agcgacaacg ttttcatctg
    29461 aactttgaaa acgcttcttc caccgccaac cttccgagcg aacgcgattt ctaccgctgg
    29521 gcgtggtctg ccttgaaaaa tgaataccgc cgcgccgaca tcagcctgat tcttctggac
    29581 gaagaagaag cccgcgctta caaccgcgac taccgcggca aagattacgc caccaatgta
    29641 ttgagtttcg cgctcaacga aggcgaaatc ctgccctgcc aagtttcgga aaaactgtac
    29701 ggcgatttga ttatctgccc gcaagtggtt ttgaaagaag ccgccgaaca gggcaaaacg
    29761 cccgaacggc attttgccca cctgaccata cacggcgttt tgcacctgat gggctacgac
    29821 cacatcgaag acgatgaagc cgaaataatg gaagccgaag aaatccgcct gatgctggcg
    29881 gcaggcttcc ccaaccccta ccaagaggac gaatattaaa atggacggta cgcagtcgaa
    29941 acccaagttt ttcgaacgcc tgatctcccg acttgccggc gagcccgact ccgccgaaga
    30001 cgtattgacc ctgctgcgcc aagcgcacga gcaggaagtt tttgatgcgg atacgctttt
    30061 aaggttggaa aaagtcctcg atttttccga tttggaagtg cgcgatgcca tgattacgcg
    30121 cagccgtatg aacgttttaa aagaaaacga cagcatcgag cgcatcaccg cctacgtcat
    30181 cgataccgcc cattcgcgct tccccgtcat cggcgaagac aaagacgaag ttttgggcat
    30241 tttgcacgcc aaagacctgc tcaaatatat gttcaacccc gagcagttcc acctgaaatc
    30301 cgtcttgcgc cctgccgttt tcgttcccga aggcaaatct ttgaccgccc ttttaaaaga
    30361 gttccgcgaa cagcgcaacc acatggcgat tgttatcgac gaatacggcg gcacgtcggg
    30421 tttggtcacc tttgaagaca tcatcgagca aatcgtcggc gaaatcgaag atgagtttga
    30481 cgaagacgac agtgccgata atatccacgc cgtttcttcc gaacgctggc gcatccacgc
    30541 ggctaccgaa atcgaagaca tcaatacctt cttcggcaca gaatacagca gcgaagaagc
    30601 cgataccatc ggcggcctgg tcattcaaga gttagggcat ctgcccgtac gcggcgaaaa
    30661 agtccttatc ggcggtttgc agttcaccgt cgcccgcgcc gacaaccgcc gcctgcacac
    30721 gctgatggcg acccgcgtga agtaagcaga gcctgcccgc accgccgttt ctgcacagtt
    30781 taggatgacg gtacggacgt tttctgtttc aatccgcccc atccgccaaa cataaaaatg
    30841 ccgtctgaaa ccggaaaaca ggttcagacg gcatttcgct tatccgctta ttttttgctc
    30901 aaagtcagcc ccgtccagcc gaacagaagc gtcagtgcca aactcaaata gcagaaaaag
    30961 gcatacggca gatattccca caccggcaca cccagcgcgt ggctgataaa tacgccgcac
    31021 acgctccacg gaacaagcgg gttgatgacc gtacccgcgt cttcgagcgt acgcgagagg
    31081 ttgcgggaat gtagtccgag cctgtcgtaa acgggtttga acgtttctcc cgaaagcagg
    31141 atgctcaaat attgttcgcc aatcaggaaa ttgaccccga ccgaagtcat ggcaacactg
    31201 aacgtcgcgc gtccggcatt cgtcaaaaag ctgcggacgg catccagcag ggaaggaatc
    31261 gcgcccagcg caaacagcag tccacccaaa ctcatcccga gaatcacgat ggtttgcgtg
    31321 aaaaacatac tttccaaacc gccgcgcgaa atcagtttgg caacatcttt aaacgcttcg
    31381 ccttcgagtt tgtaaccgcc gtaaaaccac gcgccgagct gacgcagatc gggcgtgctg
    31441 tgcagatacg ttacggcaac ggcggcaatg acggtaaaga gcatggcgac cacggcattg
    31501 acgcgcatca atgccaaaac gaccaacagt gcaaacggaa tcagcgaata gccgtgcacc
    31561 aatcccgtgg cttcaagctg gctgcggaag gattcgacgc cgttcaaatc ctgcgcggcg
    31621 acattcggca aaagccaaag catcagtgcc gcactaatga gccacgcggg gatggtggtg
    31681 tacatcatat ttttgatgtg ctcaaacaag tcgatgccga cgatggacgc ggaaatgccc
    31741 gtggtgtcgg aaagcgggga cattttgtcg ccaaaaaatg cgcccgaaac aatcgcgccc
    31801 gccgtcatcg ccatatcggc atgaaacgcc gccgccatcc ccataaaggc aacgccgacg
    31861 gtggcgcagg tggtcaggct gctgccgatg gacacgccga tgacggaaca cagcgcgaaa
    31921 gcggaaaaat aaaaataagt cggggaaatc agcccgaaac cgtaatacat cagcgtcgga
    31981 atcgcaccgc tcatcatcag cgcgctgacc atcagcccga tgaagaaaaa caggtaaatc
    32041 gcgcccatac cctgattcaa cgcgcctatc atgccctgct gcatatcgtt gtatttcaaa
    32101 ccgcgcgcca agccgtacaa aatcagcacg acgatggcgg caataatgga catatgcggc
    32161 agccactcca atgaaatgat ggtatagccc atcgcggcaa tcagagcgac gacgacggca
    32221 agtgcctcac cgcgcggcat atcgagtaag gatttgaaag caaacatgat tctttgcccg
    32281 atttgatata aagttaacgg attctaacac accataccga atccgcccaa cgttttcaga
    32341 cggcatttta gcgttttaca aaagccggac agaaacaaaa cggcaatttt ctcaatttaa
    32401 attaattttt tttgaaatat aattttttat ttttttgttt gttggcatat aagactttta
    32461 tggattgaaa tattaaaacc tcggcacaca cgccgcaaac accggtacgc aaaaatgccg
    32521 tctgaaagat gttcagacga catttctcaa gaaaaagatt atttgtccgc cctatatccg
    32581 tacaccgcaa aaaacacgat atacagataa cagatgacgg aaacgacaaa cgaagacatc
    32641 agggtgtaag tatctgccac ccagccctgc acgacaggaa cgaccgcacc gccgacaatc
    32701 gcggtacaca gtacaccgga agccgcgttg gtaaattttc ccaatccttt ggttgccaaa
    32761 gagaaaatcg tcgggaacat aatcgagttg aaaaaaccga tggcaagcag cgaccacatc
    32821 gccacatccg cattgccgct acccgtcgcc atcgcgacgg caagcagtac gaccgcagcc
    32881 gatgcgttaa acgccaaata acggttgggc gcgaatttcg ccatcaccgc cgaaccgagg
    32941 aaacgtccga ccatcgcgcc gccccaatag aacgacaggt aatgcgcggc agaagcatga
    33001 tccagccctt tcagataacc caatacgttg accatcaacg aaccgataga cacctccgcg
    33061 ccgacatagc agaaaatgcc tgccgtaccg aacacgagat gtttgtattg ccatacgctg
    33121 gttttgccgt cgtggttgtg cgcgctttcc tcggcggcaa ttttgcgcgc gtcgggcagc
    33181 cggatcattt tcacgaaaac ggcaaggata atcagcagcc ccgccagtcc caaataggga
    33241 atctgtacgg aagaaatctg ttccgccttg ctgacggttt gggttgcgtc cgccaaaatc
    33301 aggaacgcgc cgatttgcgg cgcaatggtc gtacccaaag cgttaaacgc ctgaaccagc
    33361 gtcagtgttg ccgattcctt gccgggtttc gccagcaggg taacataagg attaccggca
    33421 acctgaagca gcgttacgcc ggaagccaaa ataaacaacg cgcccaaaaa taccgcgtaa
    33481 gaatggctgc ccgcagcagg ataaaacagc aggcatccga ccgccgtcag cagaaagccg
    33541 ccgataacgc cgtttttgta gccgactttg ccgacaaaag cccccatcgg gatggacatc
    33601 accgcatagg cggtaaagaa acagaattgg atcagcatcg cctgaacgta agacaggtcg
    33661 aaaatttctt tcaaatgagg gataaggatg tcgttcatgc aggtaataaa acccatcatg
    33721 aagaacagcg tggtcaagac gaccaatggg gacgtatgat tgttttgtga ttgcgcagac
    33781 atgatttgcc tttcgtggtg tcggaatatt acccgtttca agaaaataga aattgacatt
    33841 tcttaacggc aatgcaaatc atactgatat ttgaacattt tgcaaacttt atcggatgca
    33901 ggcaatgcgc cgatctgaaa ttcaagcagc agaaattaat attttacagt tgcttgcata
    33961 gattttaata gattttaaaa aattccggcg gacttgcaaa aaccgttccc aataaaatga
    34021 aaatccgccg ccgtatccgg aaaattcgga aatgccgcat cgtggcatca aaaccggagc
    34081 ggaaagaatg tcgtatgccc gacaaaaaag gggcatacgg ctgtgccgta ttttttgcac
    34141 cgtcctccgc ccttcggcgg gggcgtgaaa atatagtgga ttaacaaaaa tcaggacaag
    34201 gcgacg
//
LOCUS       DBBZXU010000010        29751 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.010, whole genome shotgun sequence.
ACCESSION   DBBZXU010000010 DBBZXU010000000
VERSION     DBBZXU010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29751)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29751)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29751
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.010"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(213..860)
                     /locus_tag="ACJJDE_000391"
     CDS             complement(213..860)
                     /locus_tag="ACJJDE_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF799 domain-containing protein"
                     /protein_id="HGG7540379.1"
                     /translation="MKPLILGLAAVLALSACQVQKAPDFDYTSFKESKPASILVVPPL
                     NESPDVNGTWGVLASTAAPLSEAGYYVFPAAVVEETFKQNGLTNAADIHAVRPEKLHQ
                     IFGNDAVLYITVTEYGTSYQILDSVTTVSAKARLVDSRNGKELWSGSASIREGSNNSN
                     SGLLGALVSAVVNQIANSLTDRGYQVSKTAAYNLLSPYSHNGILKGPRFVEEQPK"
     gene            complement(857..1225)
                     /locus_tag="ACJJDE_000392"
     CDS             complement(857..1225)
                     /locus_tag="ACJJDE_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4810 domain-containing protein"
                     /protein_id="HGG7540380.1"
                     /translation="MNPKTLSRLSLCAAVLALTACGGNGQKSLYYYGGYPDTVYEGLK
                     NDDTSLGKQTEKMEKYFVEAGNKKMNAAPGAHAHLGLLLSRSGDKEGAFRQFEEEKRL
                     FPESGVFMDFLMKTGKGGKR"
     gene            complement(1235..1906)
                     /locus_tag="ACJJDE_000393"
     CDS             complement(1235..1906)
                     /locus_tag="ACJJDE_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsgG/HfaB family protein"
                     /protein_id="HGG7540381.1"
                     /translation="MKTVSTAVVLAAAAVSLTGCATESSRSLEVEKVASYNTQYHGVR
                     TPISVGTFDNRSSFQKGIFSDGEDRLGSQAKTILVTHLQQTNRFNVLNRTNLNALKQE
                     SGISGKAHNLKGADYVVTGDVTEFGRRDVGDHQLFGILGRGKSQIAYAKVALNIVNVN
                     TSEIVYSAQGAGEYALSNREIIGFGGTSGYDATLNGKVLDLAIREAVNSLVQAVDNGA
                     WQPNR"
     gene            complement(2071..2790)
                     /locus_tag="ACJJDE_000394"
     CDS             complement(2071..2790)
                     /locus_tag="ACJJDE_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7540382.1"
                     /translation="MATLSNKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLE
                     KVYDAIVEAGHPEPFAIRFDLMSAEEKEFNQFAATIAEATQGKLDGIVHCAGYFYALS
                     PLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF
                     GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEAKSERKSYGDVL
                     PAFVWWASTESKGRSGEIVYL"
     gene            complement(2874..4187)
                     /gene="hpnE"
                     /locus_tag="ACJJDE_000395"
     CDS             complement(2874..4187)
                     /gene="hpnE"
                     /locus_tag="ACJJDE_000395"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HGG7540383.1"
                     /translation="MMNTPHPRPKIAVIGAGWAGLSAAVTLARHADVTLFEAGRQAGG
                     RARTLAGNTDGFGFLDNGQHILLGAYRGVLRLMKTIGSDPRAAFLRVPLHWHMHGGLQ
                     FRALPLPAPLHILGGVLLARRAPTAFKAKLLADMSDLQKSARLGQPDTTVAQWLKQRN
                     VPRAAVMQFWQPLVWGALNTPLETASLRVLCNVLSDGVLTKKSGSDYLLPKQDLGAIV
                     AEPALADLQRLGADIRLETRVCRLNTLPDGKVLVNGEAFDAAVPATAPYHAAALLPEG
                     TPEHVQTAYQNLRYHAITTVYLRYAEPVRLPAPLTGLADGTVQWLLCRGRLGLPENEV
                     SAVISVSDRVGAFTNRAWADKVHADLKRILPHLGEPEAVRVITEKRATTAADAPPPDL
                     SWLHRHRIFPAGDYLHPDYPATLEAAVQSGFAAAETCLQSLSDAV"
     gene            complement(4266..5138)
                     /gene="hpnD"
                     /locus_tag="ACJJDE_000396"
     CDS             complement(4266..5138)
                     /gene="hpnD"
                     /locus_tag="ACJJDE_000396"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HGG7540384.1"
                     /translation="MKGLDYCRQKAEESRSSFLSGFRFLTQEKRDAVTILYAFCRELD
                     DVVDECSNPDVAQATLNWWRGDLDKVFGGAMPEHPVNQALRQVKETFKLPKYELEALI
                     DGMQMDLVQARYGSFEELKLYCHRVAGVVGCLIARILGFSDSKTLEYADKMGLALQLT
                     NIIRDVGEDARNGRIYLPMEEMRRFDVPASVILQCRPTENFTELMAFQIKRARETYRE
                     AVSLLPDADKKAQKVGLVMAAVYYALLNEIDRDGAQNVLKYKIALPSPRKKRIALKTW
                     LFGFKPRPGTPERA"
     gene            5309..7171
                     /gene="hscA"
                     /locus_tag="ACJJDE_000397"
     CDS             5309..7171
                     /gene="hscA"
                     /locus_tag="ACJJDE_000397"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HGG7540385.1"
                     /translation="MALLQISEPGMSAAPHRHRLAAGIDLGTTNSLVATVRSGSAACL
                     PDAEGRVTLPSVVRYLENGGIEVGKTALSAQKTDPLNTVSSAKRLIGRTLADLHQNTH
                     YLPYRFGDNQRVIELHTRQGVKTPVEVSAEILKTLKSRAEETLGGDLVGVVITVPAYF
                     DDAQRQATKDAARLAGLNVLRLLNEPTAAAIAYGLDNASEGTFVVYDLGGGTFDVSVL
                     QLTKGLFEVKATGGNSALGGDDFDHRLFCYLLEQNGLSQLNEQDSQLLLSLVRAAKEQ
                     LTTQTEARIQATLSDGMAIDTSISRAEFHNLTQHLVMKTLEPVKQALKDAGVGKNEVK
                     GVIMVGGSTRMLHVQQAVATFFGQTPLNNLNPDEVVALGAAIQANVLAGNKADGEWLL
                     LDVTPLSLGLETYGGLAEKIIPRNSTIPTARAQDFTTFKDGQTAMTIHVVQGERELVA
                     DCRSLAKFTLRGIPPMAAGAARIRVTFQIDADGLLSVSAQEQSTGVHAQIEVKPSYGL
                     DDGAITRMLKDSMDNAAEDMAARARAEAVVEAESLTDAVNAALELDSDLLDAEELQQI
                     RQGIADLQGRLKDGKAEDIRAAAAKLGSITDNFAAKRMNRNIQRALTGQSVDNI"
     gene            7248..7904
                     /locus_tag="ACJJDE_000398"
     CDS             7248..7904
                     /locus_tag="ACJJDE_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7540386.1"
                     /translation="MEKSGIVYLMKTVIKGVYKIGISEVSNFEGRMRHLENNGYANVA
                     GLERILAVKTDNYKEKENLLHEIFSKSRIGDTELFAVDENLVKRLFLSLRGEIVFPKN
                     ETAESEFEKSVHERRQEGNAESGRKQLLDLVRRGHREYPYALPRLLAGAASYKPKKSK
                     IRLFKEAYFRKNGRRLTDEIADGIHIYTCFSRADLEKAYSEYLELFKSESDAESRKPR
                     "
     gene            7940..8701
                     /locus_tag="ACJJDE_000399"
     CDS             7940..8701
                     /locus_tag="ACJJDE_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2314 domain-containing protein"
                     /protein_id="HGG7540387.1"
                     /translation="MMGDSVIYYVEQADKPVNRAGERARKTFEYFWRELFWERRRIIP
                     ALDFAMVKAPFFQDGEDGEICEHMWIDDIYFDGLYIYGVLNNEPGELTNVEQGESVCV
                     PVDDISDWMFVCNGIPYGGFTIQAMRGQMTEEERTEHDAAWGIDFGDPGQVLLVYEEK
                     EHPENLEEHPMCRNCIDDFRQQLSQNPDFLHEQDEDGYTPLHHEAIAGNALMVQAMLE
                     YGANPASKTSEGYTALDFARLAGWQNVADLLEPRH"
     gene            8756..9097
                     /gene="fdx"
                     /locus_tag="ACJJDE_000400"
     CDS             8756..9097
                     /gene="fdx"
                     /locus_tag="ACJJDE_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009425374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HGG7540388.1"
                     /translation="MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACE
                     KSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIP
                     KYTINHAREEH"
     gene            complement(9384..9971)
                     /locus_tag="ACJJDE_000401"
     CDS             complement(9384..9971)
                     /locus_tag="ACJJDE_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HGG7540389.1"
                     /translation="MNNMFAAKLSKLVYTASDHPDSLSEMEEFDRLILLIRKLYQILD
                     GQHILSRVTVCLHYRSRRGLIALDKAAAGCDAAMLRAQRWRIYTQIAERLAGSGGGFT
                     VTAESVSAACPELEGRYLELVRRTATSFGFVQVQEYPAGGQEETQAVPDAASDHSVRK
                     PIKINIEAKVERYPAYRPTAALKVTRRRFFRLQNR"
     gene            10184..10381
                     /gene="iscX"
                     /locus_tag="ACJJDE_000402"
     CDS             10184..10381
                     /gene="iscX"
                     /locus_tag="ACJJDE_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HGG7540390.1"
                     /translation="MKWTDTRRIAEELYDLHGETIDPRTVRFTQLRDLIMALPEFDDD
                     PARCGERILEAVQQAWIDEAE"
     gene            complement(10449..10850)
                     /locus_tag="ACJJDE_000403"
     CDS             complement(10449..10850)
                     /locus_tag="ACJJDE_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7540391.1"
                     /translation="MKDKHDSSAMRLDKWLWAARFFKTRSLAQKHIELGRVQVNGSKV
                     KNSKTIDIGDIIDLTLNSLPYKIKVKGLNHQRRPASEARLLYEEDAKTAALREERKQL
                     DQFSRITSAYPDGRPTKRDRRQLDRLKKGDW"
     gene            11061..12020
                     /locus_tag="ACJJDE_000404"
     CDS             11061..12020
                     /locus_tag="ACJJDE_000404"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HGG7540392.1"
                     /translation="MKPVFLDFEQPIAELTNKIDELRFVQDESAVDISDEIHRLQKKS
                     NDLTKSIFSKLTPAQVSQVSRHPQRPYTLDYIDALFTDFEELHGDRHFADDHAIVGGL
                     ARFNGQSVMVVGHQKGRDTKEKIRRNFGMPRPEGYRKALRLMKTAEKFGLPVMTFIDT
                     PGAYPGIGAEERGQSEAIGKNLYELTRLHVPVLCTVIGEGGSGGALAVAVGDYVNMLQ
                     YSTYSVISPEGCASILWKTAEKAADAAQALGITADRLQKLDLVDTVIKEPLGGAHRDF
                     GQTMKNVKAVLEKQLHEAQSIPLADLLSRRFDRIMAYGKFSEQ"
     gene            12088..13398
                     /gene="tilS"
                     /locus_tag="ACJJDE_000405"
     CDS             12088..13398
                     /gene="tilS"
                     /locus_tag="ACJJDE_000405"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HGG7540393.1"
                     /translation="MLTLDAFEQCLKDCFPQGLNGKKTAVALSGGLDSVVLLHLLVRA
                     GKKGGFIPDALHIHHGLSPRADDWADFCQNYCDMLGVGLETVKVCVEKNGLGIEAAAR
                     QKRYAAFAEKGFDVLALAHHRDDQIETFMLAVARGGGLRALAAMPTVRPFGEKGIIWR
                     PLLPFSRQDIWDYAQKHGLPNIEDESNSDTAYLRNRFRHRILPELSAQIPHFGRHVLN
                     NVRALQEDLALLDEIIGQDCRWVCEEGSFDTVRWQAFSPRRKTHILRYFLKENGIPMP
                     NQNALADIARVLTEAKTGRWNLQGFELHHYAGRLFVFRLEKTDKLRFLKDRQISGNLR
                     EILTGQGFVLKRHPFGLPEHLLEQDGILRTVAVSDTLAVGGIHKDVKKILQGKRVLPV
                     LRPIWPLVADSGNRPLALANCCADFQYSVSDGILPVHPDFPILF"
     gene            13472..14257
                     /locus_tag="ACJJDE_000406"
     CDS             13472..14257
                     /locus_tag="ACJJDE_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HGG7540394.1"
                     /translation="MKHISSTNNEHIRHLHRLLSQGKFRRQYAQTVLEGVHLLQVFLQ
                     SGRKPVGVYIPEGKMPSEEVRRLRAVVPEGKVFSVSDGILKKISSLTCADDVLALIDI
                     PDAGALPAGGDCVVLDGVQDPGNVGTVLRSAAAAGVGTVVLGRGCADAWSPKVLRAGM
                     GAHFLSGIYPQADLEIWLARYKGRVFATALREEKQAVLYGEDLCGPTAWVFGNEGAGV
                     GKAVLDRADKCVRIPMHDATESLNVAMAATICLFEQMRQRSAY"
     gene            14267..14464
                     /locus_tag="ACJJDE_000407"
     CDS             14267..14464
                     /locus_tag="ACJJDE_000407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540395.1"
                     /translation="MPSEKIYYGVLIFLCIASMLLSPFFYAGALKPKKAALRKDGQWK
                     LILLSNTVAAAVLAWVWWKWF"
     gene            14726..15079
                     /locus_tag="ACJJDE_000408"
     CDS             14726..15079
                     /locus_tag="ACJJDE_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540396.1"
                     /translation="MKNCEFFYDPTRAIYDSGADYLTREKHRLVVIANSAWGLLLNLS
                     CYYDEVLEKRKIPFGKQEIDDDMDKVSALKRKFKDISEIKVGDGWEYPFNYEQGMKEL
                     DEVLLKYIPFFEEER"
     gene            15091..15396
                     /locus_tag="ACJJDE_000409"
     CDS             15091..15396
                     /locus_tag="ACJJDE_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540397.1"
                     /translation="MRVSKIIGSMLLVTAVQTVFSANVYACRHNGKTSYSQTPGKHCT
                     NAGLGRDRVYSSVRPAVKDRAEDAGVGDYSDTVRDEHVQNPKGNAQKDGSDAGIRPH"
     gene            15458..16834
                     /gene="mpl"
                     /locus_tag="ACJJDE_000410"
     CDS             15458..16834
                     /gene="mpl"
                     /locus_tag="ACJJDE_000410"
                     /EC_number="6.3.2.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HGG7540398.1"
                     /translation="MKHIHIIGIGGTFMGGIAAIAKEAGFEVSGCDAKMYPPMSTQLE
                     ALGIGVHEGFDAAQLEEFKADVYVIGNVAKRGMDVVEAILNRGLPYISGPQWLAENVL
                     HHHWVLGVAGTHGKTTTASMLAWVLEYAGLAPGFLIGGVPENFSVSARLPQTPRQDPN
                     SQSPFFVIEADEYDTAFFDKRSKFVHYRPRTVVLNNLEFDHADIFADLGAIQTQFHHL
                     VRTVPSEGLIICNGQQQSLQDTLDKGCWTPVEKFGTEHGWQAGEANADGSFDVLLDGK
                     KAGHVAWSLMGGHNRMNALAVIAAARHAGVDIQTACEALSTFKNVKRRMEIKGTVNGI
                     TVYDDFAHHPTAIETTIEGLRQRVGNARILAVLEPRSNTMKLGTMKSALPESLKEADQ
                     VFCYAGGVDWNVAEALAPLGGRLHVGKDFDAFVAEIVKNARTGDHILVMSNGGFGGIH
                     TKLLDALR"
     gene            17041..18093
                     /gene="bioB"
                     /locus_tag="ACJJDE_000411"
     CDS             17041..18093
                     /gene="bioB"
                     /locus_tag="ACJJDE_000411"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004076 - biotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HGG7540399.1"
                     /translation="MTVSPVALRRKTECKPHPTARYWKKCDVEALFGLPFLDLIYQAA
                     EIHRQNFNPREIQLSTLLSIKTGGCPEDCAYCPQSAHHNTNLGKEQMMDVDEIVEKAK
                     IAKSRGASRFCMGAAWRGPKPKDVETVSAIIKAVKGLGMETCGTFGMLEEGMAEDLKE
                     AGLDYYNHNLDTDPDRYNDIIHTRRHEDRMDTLGKVRNAGLKVCCGGIVGMNETRAER
                     AGLIASLANLDPQPESVPINRLVKVEGTPLADAEDLDWTEFVRTIAVARITMPQSYVR
                     LSAGRSNMPEAMQAMCFMAGANSIFYGDKLLTTGNPDEDGDRILMEKLNLYPLQFELE
                     GEVAEVEKASGIKVDY"
     gene            complement(18240..18806)
                     /locus_tag="ACJJDE_000412"
     CDS             complement(18240..18806)
                     /locus_tag="ACJJDE_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7540400.1"
                     /translation="MNIKYSGIENRFETAILKKNGVRSGFVSFAPNLAAVKLNDYAKV
                     RKRITKTKQKADIVIVMFHGGAEGKQAEHLPFDTEIFYGENRGNVVEFARLAVDSGAD
                     VVFGQGPHVTRAVELYRDRFISYSGGNFATYGAINTSGISGIAPIFKIITNKQGKFIS
                     GTIIPITQADDKIPKIDPEKPLSGGLFI"
     gene            complement(18930..19169)
                     /locus_tag="ACJJDE_000413"
     CDS             complement(18930..19169)
                     /locus_tag="ACJJDE_000413"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540401.1"
                     /translation="MGGCTFFRRTAFVKQRAFEVADGNVRVLQGRFDVFQNIGIGQVI
                     DRIIAAEHNVAHADNGNGIGCLFVRRILSVHIAGI"
     gene            19156..19389
                     /locus_tag="ACJJDE_000414"
     CDS             19156..19389
                     /locus_tag="ACJJDE_000414"
                     /inference="COORDINATES: protein motif:HMM:NF021127.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HGG7540402.1"
                     /translation="MQPPKICYAFRTPSAYGQYLADAGFDYLSFANNHSNDFGAQGIT
                     ATAAGGSSFTYSIALKPLPITRPKLRKIPPSPR"
     gene            complement(19452..21311)
                     /gene="ilvD"
                     /locus_tag="ACJJDE_000415"
     CDS             complement(19452..21311)
                     /gene="ilvD"
                     /locus_tag="ACJJDE_000415"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HGG7540403.1"
                     /translation="MPEYRSKTSTHGRNMAGARALWRATGVMETDFGKPIIAVANSFT
                     QFVPGHVHLHNMGQLVAREIEKAGAIAKEFNTIAIDDGIAMGHSGMLYSLPSRDLIAD
                     SIEYMVNAHCADALVCISNCDKITPGMLIAAMRLNIPTIFVSGGPMEAGKVIGVANIQ
                     PERRLDLIDAMIESADDNVSNRQVEEVEQNACPTCGSCSGMFTANSMNCLTEALGLSL
                     PGNGSYLATHAGRKELFLEAGRMIVEITKRYYEQNDETVLPRSIATKKAFENAMTMDI
                     AMGGSTNTILHLLAVANEAGVDFKMADIDRLSRVVPCICKTAPNNHDYYMEDVHRAGG
                     IFAILKELDKAGKLHTDVHTIHAPTLKDAIEKWDVTNPENTRAIERFKAAPGGVRTTQ
                     AFSQNRMWKTLDLDREKGCIRDVAHAYSQDGGLAVLFGNIAERGCVVKTAGVDESILK
                     FTGRARVFESQEAAVEGILGNQIVAGDIVIIRYEGPKGGPGMQEMLYPTSYLKSKGLG
                     KACALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVHEGDTVEIDIPNRSIHLVISDE
                     ELAARRAEMEARGSKAWKPENRDRYVSAALRAYGAMATSADKGAVRDVAQIER"
     gene            complement(21484..23253)
                     /gene="cysI"
                     /locus_tag="ACJJDE_000416"
     CDS             complement(21484..23253)
                     /gene="cysI"
                     /locus_tag="ACJJDE_000416"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HGG7540404.1"
                     /translation="MTVQTKTKGLAWQEKPLSDNERLKTESNFLRGTILDDLKDPLTG
                     GFKGDNFQLIRFHGMYEQDDRDIRAERAEAKLEPLKFMLLRCRLPGGIIKPSQWIELD
                     KFARENSHYRSIRLTNRQTFQFHGVPKAKLQTMHRLLHKLGLDSIATAADMNRNVLCT
                     SNPIESELHRQAYEYAKKISEHLLPRTRGYLDVWVDGKKVQSSDDFLQEDEPILGKTY
                     LPRKFKTAVVIPPLNDVDCYGNDLDFVAISDGGGQLAGFNVLAGGGLSMEHGNTKTYP
                     NISLELGFVPPEHALKAAEAVVTTQRDFGNRSDRKNARTRYTIQNMGLDNFRAEVERR
                     MGMPFEPIRPFKFTGRGDRIGWVKGIDGNWHLTLFIESGRLVDEGGKQLLTGVLEIAK
                     IHKGDFRITANQNLIVANVAEADKAKIEELARTYGLIRNDVSKLRENAMSCVSFPTCP
                     LAMAEAERVLPDFIDELDKIMAKHGTSDDYIVTRITGCPNGCGRAMLAEIGLVGKAVE
                     RYNLHIGGDREGVRIPRLYKENITLPEILAELDDLIGKWAAERNIGEGFGDFAIRTGI
                     VKPVLNAPVDFWDASKAVAIARA"
     gene            complement(23280..25094)
                     /locus_tag="ACJJDE_000417"
     CDS             complement(23280..25094)
                     /locus_tag="ACJJDE_000417"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009337 - sulfite reductase complex
                     (NADPH) [Evidence IEA];
                     GO_function: GO:0004783 - sulfite reductase (NADPH)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019344 - cysteine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     flavoprotein subunit"
                     /protein_id="HGG7540405.1"
                     /translation="MSEHDMQNTNPPLPPLPPEITQLLSGLDAAQWAWLSGYAWAKAG
                     NGASAGLPALQTALPTAEPFSVTVLSASQTGNAKSVADKAADSLEAAGIQVSRAELKD
                     YKAKNIAGERRLLLVTSTQGEGEPPEEAVVLHKLLNGKKAPKLDKLQFAVLGLGDSSY
                     PNFCRAGKDFDKRFEELGAKRLLERVDADLDFTASANAWTDNIAALLKEEAAKNRATP
                     APQATPPADLQTASEGRYCKAAPFPAALLANQKITARQSDKDVRHIEIDLSGSDLHYL
                     PGDALGVWFDNDPALVREILDLLGIDQATEIQAGGKTLPVASALLSHFELTQNTPAFV
                     KGYASFADDDELDRIAADNAVLQGFVQSTPIADVLHRFPAKLTAEQFAGLLRPLAPRL
                     YSISSSQAEVGDEVHLTVGAVRFEHEGRARAGGASGFLADRLEEDGTVRVFVERNDGF
                     RLPEDSRKPIVMIGSGTGVAPFRAFVQQRAAENAEGKNWLIFGNPHFAADFLYQTEWQ
                     QFAKDGFLHRYDFAWSRDQEEKIYVQDKIREQAEGLWQWLQEGAHIYVCGDAAKMAKD
                     VEAALLDVIIGAGHLDEEGAEEYLDMLREEKRYQRDVY"
     gene            complement(25091..26377)
                     /locus_tag="ACJJDE_000418"
     CDS             complement(25091..26377)
                     /locus_tag="ACJJDE_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit 1"
                     /protein_id="HGG7540406.1"
                     /translation="MTAQHQTPLRFITAGSVDDGKSTLIGRLLYDSKALLSDQIKTLE
                     SGKSNGLKETIDFSILTDGLEAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRN
                     MVTGASTASAAVVLVDASQLDFGAQPLQLLPQTKRHSAILRQLNCPHIVVAVNKMDLL
                     DYSEDKFNAIVEAYRRLAEQLGLKDVHFVPVSALLGDNIVYPGGNMPWYKGEPLLSIL
                     ENLPGADETGRSAADFYFPVQLVVRQDADKADDFRGYQGRIERGSVAVGQTVRIEPNG
                     LTAEVSEIITPKGEVAQAFAGEAATLRLDRDIDVSRGDLFVDKNSPLAPQKHLEATLC
                     WFDERPLNTARKYLLKHGTQTVPAKVGEIESVLDVRTLEQEAGAESLKMNDIAKVRIN
                     LQKPVTATPYAENTAAGSFILIDEATYGTVAAGMIL"
     gene            complement(26416..27339)
                     /gene="cysD"
                     /locus_tag="ACJJDE_000419"
     CDS             complement(26416..27339)
                     /gene="cysD"
                     /locus_tag="ACJJDE_000419"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0000103 - sulfate assimilation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HGG7540407.1"
                     /translation="MTKTEPNNAQLDWLESESIHIIREVAAECENPALLFSGGKDSVV
                     LLALACKAFRLGSRPVKLPFPLVHIDTGHNYPEVIAFRDAQAAKLNARLIVGRVEDSI
                     AKGTVVLRKETDSRNAAQAVTLLETIEANGFDALMGGARRDEEKARAKERIFSFRDEF
                     GQWNPKAQRPELWSLYNTRLHKGENMRVFPISNWTELDIWQYIARENLELPPIYYSHR
                     REVVRRRGLLVPVTPLTPKMPSETSEILDVRFRTVGDISCTCPVESTASTPTEIIRET
                     AVADISERSATRLDDQASEAAMEKRKKEGYF"
     gene            complement(27377..28117)
                     /locus_tag="ACJJDE_000420"
     CDS             complement(27377..28117)
                     /locus_tag="ACJJDE_000420"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HGG7540408.1"
                     /translation="METTLLKPALWQIPHIGSGSETALAEKTETLKQRLHRIAGSHRD
                     ARFASSLAAEDMVITDLIAGENLNIGIFTLDTGLLHAETLNLLDRIERVYPHMQIKRF
                     QPIREDALHYVESKGRFAFYDSVEARRECCRIRKIEPLNRAIAGADAWLTGQRREQSA
                     TRTELPFAEYDAGRGIGKYNPIFDWSEHDVWAYILANNVPYNDLYRQGFPSIGCDPCT
                     RPVKAGEDIRAGRWWWEGRNSKECGLHK"
     gene            complement(28128..29579)
                     /gene="cysG"
                     /locus_tag="ACJJDE_000421"
     CDS             complement(28128..29579)
                     /gene="cysG"
                     /locus_tag="ACJJDE_000421"
                     /EC_number="1.3.1.76"
                     /EC_number="2.1.1.107"
                     /EC_number="4.99.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0043115 - precorrin-2 dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051266 - sirohydrochlorin ferrochelatase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siroheme synthase CysG"
                     /protein_id="HGG7540409.1"
                     /translation="MNYFPIFANLAGRPVLVVGGGAVAARKISLLLKAGAEVRVAAKH
                     LNAELSALAAENKILWLAEEFRAEHIRTVFLIIAASSDQALNRRVFHLAESCQKPVNV
                     VDDRDHCSFIFPSVIDRNPVQIAVSSSGSAPVLARLLRERLEALLPPSLGDMAEISGR
                     WRDAVKDKLKSVTERRRFWEKQFNGRFAALVKNRQNTLAERELAGQLEQSRQNDQGGS
                     VSLVGAGPGDAGLLTLKGLQEIQQADVVLYDALVSDGILSLVRRDAERIFVGKRARGD
                     RTPQEDTNALMVRLAREGRRVVRLKGGDPFVFGRGGEELETLARHQIPFSVVPGITAA
                     VGATAYAGIPLTHRDYAQSAVFVTGHRKADAPDIEWQTLARSRQTLVIYMGALKAALI
                     AERLQQHGRSPDTPAAVISQGTLPAQKTATGTLANLAELAETAPNPALIVIGEVVGLH
                     EKLAWFGENGEGENRVGQAYPALGGLNAGQRAA"
BASE COUNT         6377 a         7837 c         8586 g         6951 t
ORIGIN      
        1 cgccttgtcc tgatttttgt taatccacta taccatacaa ccacgccgga attaagttta
       61 aatttgaata aaaggttcgg gttctgcaaa atacagaacc cgaaccttgt tcggatattg
      121 aaaccggccg cccgattttg ggcggtgcgg cttgcaagta tcaagattcg catatgccgt
      181 ctgaagctcg gagaggttca gacggcatat gcttatttgg gctgctcttc gacgaatctc
      241 ggacctttca agatgccgtt gtgagaatag ggcgacagca ggttgtatgc ggcggttttg
      301 gaaacctgat aaccgcggtc ggtcaggctg ttggcaatct gattgaccac tgcgctgacc
      361 aaagccccca acaggccgct gttgctgttg ttgctgcctt cgcggatgct ggccgaaccc
      421 gaccacaact cttttccgtt gcgggaatcg accagccgtg ctttggcgga tacggtcgtc
      481 acgctgtcta aaatttgata tgaagtgccg tattcggtaa ccgtaatgta caaaaccgca
      541 tcattgccga aaatctgatg cagtttttcc ggccggacgg cgtgaatatc ggcggcattg
      601 gtcaagccgt tttgtttgaa ggtttcctcc acgactgcgg cggggaagac gtaatagccg
      661 gcttcggaaa gcggcgcggc ggtcgaagcc agtacacccc atgttccgtt gacatcgggc
      721 gattcgttca gcggcggaac caccaaaatt gaagccggtt tgctttcctt gaatgacgtg
      781 tagtcgaaat cgggcgcttt ttgaacttgg caggcagaca gcgccaacac ggcggcaagc
      841 cctaaaatca aaggtttcat cgcttgcctc ctttaccggt tttcatcagg aagtccataa
      901 atacgcccga ttcgggaaac agccttttct cttcttcaaa ctggcggaac gcgccctctt
      961 tgtctcccga acgggaaagc agcagtccca gatgggcgtg cgcacccggg gcggcattca
     1021 tttttttgtt gccggcttcc acaaagtatt tttccatctt ttcggtctgc ttgcccaacg
     1081 aagtgtcgtc gtttttcaaa ccttcataga cggtatcggg atagccgccg taataataca
     1141 gggatttttg cccgttgccg ccgcaggcgg tcagagccaa gaccgccgca cacagcgaca
     1201 aacggctcaa ggttttcgga ttcatcattt ctccttaacg gttgggttgc catgcgccgt
     1261 tgtcaacagc ctgaaccagg ctgttgacgg cttcgcggat tgccaagtct aaaactttgc
     1321 cgttcaaagt cgcatcgtag ccggaagtgc cgccgaaacc gatgatttca cggttggaaa
     1381 gtgcgtattc gcccgcgccc tgtgcggaat agacgatttc ggaagtattg acgttgacga
     1441 tattcagagc cacttttgca taggcgattt gcgatttgcc gcgacccaaa atgccgaaga
     1501 gctgatgatc gccgacatct ctgcgtccga attcggttac atcgccggta acgacataat
     1561 ctgcgccttt caggttatgc gctttgccgg aaatgccgga ttcctgtttt aatgcgttca
     1621 aattggtgcg gttcagtacg ttgaagcggt tggtctgttg caggtgcgtt actagaatgg
     1681 tttttgcctg gctgcccaaa cggtcttccc cgtcggagaa aatgcctttt tggaagctgg
     1741 agcggttgtc gaatgttccg acggaaatcg gggtacgaac accgtgatat tgcgtattgt
     1801 aggaggcgac tttctctacc tcgagactgc gtgaggattc ggtcgcacag ccggtcagtg
     1861 aaacggcagc ggcggcaagg acaacggcgg tggaaacggt tttcataaaa tttaccctaa
     1921 ggtcaagtta aggaaataac gggttatcat tattgtcctt atgtaaattt aagtcaaggt
     1981 gtttgtctgt gcgggacgga tgcgcgcgga aggtacggat atttttcaaa cggaatcgcg
     2041 gcgcgggcgg gatgcctgcc ttttccggat ttagaggtaa acgatttcgc cgcttcgccc
     2101 tttgctttcg gtacttgccc accagacaaa tgcgggcagc acgtccccgt agcttttgcg
     2161 ttcgcttttg gcttcgcccg gatgggattt gatgcgttgc ggggaattga tgggtccggg
     2221 gacgaggacg ttggcgcgca ggttgccgaa gcgttcccat tcgtcggcgg cgactttgca
     2281 caggtagttc aacgcggctt tggacgcgcc gaagccgccc cagtaggctt tgggtgtttc
     2341 gccgtggctt tcgccgacga agatgacgga cgcgtcgggc gactgcttca gcagcgggaa
     2401 cagggcgcgg gtcagcccca taggtgcgac ggtgttgatg cggtattggt tgacccattc
     2461 ggcgacggtt tggaaatcca gcggcgagag ggcgtaaaaa tagccggcgc agtggacgat
     2521 gccgtccagt ttgccttgcg tggcttcggc aatggtggcg gcgaactgat tgaattcttt
     2581 ttcttccgca ctcatcaggt cgaaacggat ggcgaagggt tcggggtgtc cggcttcgac
     2641 aatcgcgtca tagacttttt ccagtttttt ctgatggcgt gccaccagaa tcacggttgc
     2701 gcctgccgcc gcataggctt tggcgacctg ttcgcccaga ccttgcgatg cgccggtaac
     2761 taagatggtt ttgttggaca gtgtcgccat actttttcct ttttggtggt cggtcggggg
     2821 tattttagcg ttttgccgca ccttgtaaag cgtcccgata ccagccggcg ttttcagacg
     2881 gcatcgctca ggctttgcag gcaggtttcc gccgccgcga aacctgattg tacggcggct
     2941 tcgagcgtgg cggggtagtc tgggtggagg tagtcgccgg cggggaagat gcggtgccgg
     3001 tgcagccacg acaaatccgg cggcggggca tcggctgcgg ttgtggcgcg tttttcggtg
     3061 atgacgcgca cggcttcggg ttcgcccaaa tgcggaagga tgcgtttgag gtcggcgtga
     3121 actttgtccg cccacgctcg gtttgtaaac gcgccgacgc ggtcggaaac gctgatgacg
     3181 gcggacactt cgttttcagg cagtccgagc ctgccccggc aaagcagcca ttgcaccgtg
     3241 ccgtcggcaa ggccggtcag cggggcgggc aggcggacgg gttcggcgta gcgcagatag
     3301 acggtggtga tggcgtggta gcgaaggttt tgatatgccg tctgaacgtg ttcgggcgtg
     3361 ccttcgggca ggagcgcggc ggcgtggtag ggcgcggtgg cggggacggc ggcatcgaaa
     3421 gcttcgccgt tgacgagcac tttcccgtcc gggagggtgt tcagacggca tacgcgcgtt
     3481 tcgaggcgga tgtccgcgcc gagccgttga agatccgcca aggcgggttc ggcgacgatt
     3541 gcgcccaaat cctgcttggg taggagatag tcgctgccgg attttttcgt cagcacgccg
     3601 tcggacaaaa cgttgcacaa cacgcgcagg cttgcggttt ccaaaggcgt gttgagcgcg
     3661 ccccaaacca agggctgcca aaactgcatc acggcggcac gcggcacgtt ccgctgtttc
     3721 agccattgcg ccactgtcgt gtcgggctgt ccgaggcgtg cggacttctg caaatcggac
     3781 atatcggcaa gcagtttggc tttgaatgca gtcggtgcac gccgggcaag cagcacgccg
     3841 cccaaaatat gcagcggcgc gggcaggggg agggcgcgga actgcaaacc gccgtgcata
     3901 tgccagtgca gcggtacgcg caaaaaggcg gcacggggat ccgaaccgat ggttttcatc
     3961 aggcgcaaca cgccccggta tgcgccgagc aaaatgtgct gcccgttgtc caaaaaaccg
     4021 aaaccgtcgg tatttccggc cagtgtgcgc gccctgccgc ccgcctgccg gccggcttca
     4081 aacagggtaa cgtcggcgtg ccgcgccaag gtgacggcgg cggacagtcc tgcccagcct
     4141 gcgccgatga cggcgatttt cgggcgcgga tgcggcgtgt tcatcattta ttcctccaat
     4201 ggttgaaacc ccgtttttcg gggcggcggg ggttgggttt tcctgaaggg cgggcggtat
     4261 gcgccttatg cccgttccgg cgtgccgggg cgcggtttga atccgaataa ccaggttttc
     4321 agggcaatgc gttttttgcg cggcgaaggg agggcgattt tgtatttgag gacgttttgc
     4381 gcgccgtctc ggtcgatttc gtttaaaagc gcgtaataaa ccgccgccat aaccagtccg
     4441 actttttggg cttttttgtc ggcatcaggc agcagcgata cggcttcacg gtaggtttca
     4501 cgcgcacgct ttatttggaa tgccatcaat tcggtgaaat tttctgtcgg ccggcactgc
     4561 aaaatcacac ttgcggggac atcaaaccgc cgcatttcct ccatcggcag gtaaatccgc
     4621 ccattacggg cgtcttcgcc gacatcgcgg atgatgttgg tcagttgcag cgcaagtccc
     4681 attttgtcgg cgtattccag tgttttgctg tctgaaaacc ccaaaatccg cgcaatcagg
     4741 cagccgacta cgcctgcgac gcggtggcaa tacagtttca attcctcaaa actgccgtaa
     4801 cgcgcctgaa ccaaatccat ctgcatcccg tcgattaagg cttccagttc atatttcggc
     4861 agcttgaagg tttccttaac ttgccgcaag gcctgattga cggggtgttc cggcatcgcg
     4921 ccgccgaata ccttgtccaa atcgccgcgc caccagttca atgttgcctg tgcaacatcg
     4981 gggttggaac attcgtcaac cacatcgtcc aattcgcggc aaaaggcata taaaatcgtt
     5041 accgcatccc gtttttcctg agtcaggaaa cggaagcccg ataaaaaact ggagcggctt
     5101 tcttctgctt tttgacggca atagtcgagt cctttcacga tttatattcc taatgatggg
     5161 cgggaaaggc ggattttatc ggcatttggc ggtagagggc aatttcggcg gcacgaccca
     5221 atccttagcg gtttgctcaa ctatcggcgc gaattctgtt aaaatgccgc tttccttcct
     5281 ttacacaccg caccgacagg cagaatttat ggctcttttg cagatttcag aaccgggtat
     5341 gtccgccgcc ccgcaccggc accgtttggc agcaggcatc gatttgggta cgaccaacag
     5401 cttggttgcc accgtccgca gcggcagtgc cgcctgcctg cccgatgccg aagggcgcgt
     5461 taccctgcct tccgtcgtcc gctatctgga aaacggcggc attgaagtcg gcaaaaccgc
     5521 cctgtccgcc caaaaaaccg acccgctgaa caccgtcagc tccgccaaac gccttatcgg
     5581 gcggacgctt gccgatctgc atcaaaatac gcactacctg ccttaccgtt tcggcgacaa
     5641 tcaacgcgtt atcgaattgc atacgcggca gggggtgaaa acgcctgtcg aagtgtcggc
     5701 ggaaatcctc aaaaccctta aatcgcgcgc cgaagaaacc ttgggcggcg atttggtcgg
     5761 cgtggtgatt accgtccccg cctatttcga cgatgcccaa cgccaggcca ccaaagatgc
     5821 cgcgcggctg gcgggtttga acgtattgcg cctgctcaac gaacccaccg ccgccgcaat
     5881 cgcctacggg ctggacaacg cctcggaagg cacgtttgtc gtgtacgact tagggggcgg
     5941 cacattcgac gtatccgtat tgcaactgac caaaggactg tttgaagtca aagccaccgg
     6001 cggcaacagc gcgttgggcg gcgatgactt cgaccatcgt ttgttctgct acctgctcga
     6061 acaaaacgga ctctcccaac tcaacgaaca agacagccaa ctcctgcttt cgctcgtccg
     6121 cgccgccaaa gaacaattaa ccacgcaaac cgaagcgcgc attcaggcga cgctttcaga
     6181 cggcatggca atcgacacaa gcatcagtcg cgccgagttc cacaacctga cgcagcattt
     6241 ggtgatgaaa acgctcgaac cggtcaaaca ggcgttgaaa gatgccggtg tcggtaaaaa
     6301 cgaagtcaaa ggcgtaatta tggtcggcgg ttcgacccgt atgctgcacg tccagcaggc
     6361 agtcgccacc tttttcgggc aaaccccgct gaacaacctc aaccccgacg aagtcgtcgc
     6421 gctcggcgca gccatacagg cgaacgtcct cgcaggcaac aaagccgacg gcgaatggct
     6481 gctgctggac gttacgccct tgtcgctcgg tttggaaacc tatggcggct tggcggaaaa
     6541 aatcatcccg cgcaattcca ccatccccac cgcgcgcgcg caggacttta ccaccttcaa
     6601 agacggtcag accgcgatga cgatacacgt cgtacaaggc gaacgcgaac tggttgccga
     6661 ctgccgcagc cttgccaaat tcaccctgcg cggcattccg ccgatggcgg cgggtgcggc
     6721 gcgtatccgc gtaaccttcc aaatcgatgc ggacgggctg ctgtccgttt ccgcccaaga
     6781 acaaagtacc ggcgtacacg cgcaaatcga agtcaaacct tcctacggtt tggatgacgg
     6841 cgcgattacc cgaatgctta aagacagtat ggacaacgcc gccgaagata tggcggcacg
     6901 cgcccgcgcc gaagccgtgg tcgaagccga aagcctgacc gatgccgtca acgccgccct
     6961 cgagttggac agcgatttgc tggatgccga agaattgcaa cagattcggc aaggtatcgc
     7021 cgatttgcaa ggccgtctga aagacggaaa agccgaagac atccgcgccg ccgccgccaa
     7081 actcggcagc atcaccgaca atttcgccgc caaacgcatg aaccgcaaca tccaacgtgc
     7141 gctgacaggc cagagtgtcg ataatatttg atacttaaac ggtttcagac ggcatagaga
     7201 taacctgatg ccgtctgaag gctcgaaaac acttgaaaaa catcgatatg gaaaagtcag
     7261 gcattgtcta tctgatgaaa accgtcatca agggcgtata taaaatcggc atttcggagg
     7321 taagcaattt tgaaggcaga atgcgccatt tggaaaacaa cggctatgcg aacgttgccg
     7381 gattggagcg catcctcgcc gtcaaaaccg acaattacaa agaaaaagaa aacctgctcc
     7441 atgaaatttt cagcaaaagc aggataggcg ataccgaatt gttcgccgtg gacgaaaacc
     7501 ttgtaaaacg tttgttttta tcgcttcgcg gcgaaatcgt gttcccgaaa aacgaaacgg
     7561 cggaatcgga atttgaaaaa agcgtccacg aacgcaggca ggaagggaat gccgaatccg
     7621 gccgcaaaca actgcttgat ttggtacggc gcggacaccg ggaataccct tacgcgctgc
     7681 cccggctttt ggcgggcgcg gcatcctaca agccgaaaaa atcgaaaatc cgccttttta
     7741 aagaagcata tttccgcaaa aacggcagga ggctgacgga cgaaattgca gacggcatcc
     7801 atatttacac ctgtttttcg cgggcggatt tggaaaaagc ctattccgaa tatttggaac
     7861 ttttcaaatc cgaatcggat gccgaaagca gaaaaccacg gtaaggtgca aacagatacc
     7921 gtacacgttg aggagcagta tgatgggcga ttccgtcatt tattatgtag aacaggcaga
     7981 caaaccggta aaccgtgccg gcgaacgcgc ccgtaaaaca ttcgaatatt tttggcgcga
     8041 gcttttttgg gaacgccgcc gcatcattcc cgccttagat tttgccatgg tcaaagcccc
     8101 ttttttccaa gacggcgaag acggcgaaat ttgcgaacat atgtggatcg acgatattta
     8161 ttttgacggt ctttacattt atggcgtgct gaacaatgaa cccggcgaac tgaccaatgt
     8221 cgaacaaggc gaaagcgttt gcgttccggt tgacgacatc agcgactgga tgttcgtgtg
     8281 caacggcatt ccctacggcg gctttaccat acaggcaatg cgtggacaga tgacggaaga
     8341 ggagcgtacc gaacacgatg ccgcatgggg aatcgatttc ggcgatcccg ggcaggtatt
     8401 gctggtgtat gaagaaaaag aacatcccga aaatctggaa gagcatccga tgtgccggaa
     8461 ctgtattgac gattttcggc aacagttgtc ccaaaatccg gattttctgc atgagcagga
     8521 cgaagacggc tatacgccgc ttcatcatga agccatcgca ggaaatgcac ttatggttca
     8581 agccatgctt gaatacggcg caaatcctgc ctcaaagaca tcggaaggct ataccgccct
     8641 cgattttgcc cgcctggcgg gctggcaaaa tgttgccgac ctgctcgaac cgcgacatta
     8701 ggcggacagt tttccgaaaa cgaacacaaa cactttttac agaaagacaa taaaaatgcc
     8761 caaaatcacc gtacttccac acacgacatt atgccccgaa ggcgcggtta tcgaagacgc
     8821 gcccgaaggc aaaaccgtcc ttgacgtgct gctcgaccat gatatcgaag tcgatcacgc
     8881 ctgcgaaaaa tcctgcgcct gcacaacctg ccacgtgatt atccgcaaag gtttcgacag
     8941 cctggaagag ccgaccgaat tggaagaaga cctgctcgat caggcttggg gtttggaagc
     9001 cgattcgcgc ctgagttgtc aggcggttgt cgccggcgag gatttgattg tggaaatccc
     9061 caaatacacc atcaaccacg cgcgagaaga acactgaaaa caggccgcct gaagccggca
     9121 cgcttcagac ggcattgttg cgcggataag gcgcaatcgc ccgaaaacag gcgttcgtac
     9181 aggcggaact ttcgattcta tagtgaatta acaaaaatca ggacaaggcg gcgagccgca
     9241 gacagtacca atagtacggc aaggcgaggc aacgctgtac cggtttaaat ttaattcact
     9301 atatattgat ttttatcggt tttctgacgg aacggattgg tgcggcatcc gaggcggatt
     9361 actcgggcgc gatgcacggg tatttatcgg ttttgcagcc ggaaaaaccg ccggcgggtt
     9421 actttcaggg cggcggtcgg gcggtatgcc ggatagcgtt ccactttcgc ttctatattg
     9481 attttgattg gttttctgac ggaatgatcc gatgcggcat ccgggacggc ttgtgtttct
     9541 tcctgcccgc ctgccggata ttcctgtact tgcacgaaac cgaaagaggt ggcggtgcgg
     9601 cggacaagct cgagatagcg tccttcaagc tccggacagg cggcggacac gctttctgcc
     9661 gtaaccgtga agccgccgcc cgacccggca aggcgttccg caatctgcgt gtagatgcgc
     9721 caacgttggg cgcgcaacat tgccgcatcg caaccggcag ccgctttatc caaggcaatc
     9781 agaccgcgcc tgctccggta gtgaaggcaa accgttactc tggagaggat atgttgcccg
     9841 tccaatattt gatacagttt gcgtatcagc agaatcaggc ggtcaaactc ctccatctcc
     9901 gacagggaat caggatggtc ggaagcggta taaaccagtt tggacaattt tgcggcaaac
     9961 atattgttca tcaatcttcc ttgtcggttg aaaccccgct cttcggggcg gtagaatcag
    10021 atttgtttgg gagggacaac tcctcccaga tcaggacgac acataggctg gtgcttgatg
    10081 tgttgtccgg cgagttgaaa cattcagcca tcctcaaggt gcggcagttt tgccgaaaca
    10141 tattctacac ggcttcaatg ccggacgata aaaggaaatt catatgaaat ggaccgacac
    10201 ccggcgtatc gccgaagaac tctatgacct gcacggcgaa accatcgatc ccagaaccgt
    10261 gcgctttacc caactgcgcg acctgattat ggcattgccc gaatttgacg acgaccccgc
    10321 ccgttgcggc gaacgcatcc tcgaagccgt gcagcaggca tggatagacg aggcggaata
    10381 agtttcggga atgccgtctg aaatgcggcg gtacgcggtt cgtgcttctg tttgcagcgg
    10441 gaatggtttt accagtctcc ttttttcagc ctgtccagtt ggcggcggtc gcgcttggtc
    10501 ggtctgccgt cgggataggc ggaagtgatg cggctgaatt ggtcgagctg tttgcgctct
    10561 tccctcaatg ctgccgtttt tgcgtcttct tcatacagaa gccgcgcctc ggatgccggg
    10621 cggcgttggt ggttcaaacc tttaaccttg attttatagg gaagggaatt gagcgtcagg
    10681 tcgataatat cgccgatgtc tatggtttta ctgtttttga ccttcgagcc gtttacttga
    10741 accctaccca gttcgatgtg cttttgcgca agggaacggg tcttgaaaaa acgtgccgcc
    10801 caaagccatt tgtccagccg catggcggaa gaatcgtgct tgtctttcat acgattttgt
    10861 ttgaaataat tgaatttgtt tcgagtttag cataagatac gccgcctata actagtatat
    10921 atgcactaat ccactgtttt ccatgctgtc cgaacacaaa aagagggtgt ggaaaagccg
    10981 ttttggacaa taaattaact gcggaatatg cacaaatagc gtatgatagc ggcagaatct
    11041 gttgatgaga gcttcattct atgaaacctg tttttttgga ttttgaacaa cccatagccg
    11101 aactgaccaa caaaatcgat gagctgcgtt tcgtccaaga cgagtctgcc gtcgatattt
    11161 cggacgaaat acaccgtttg cagaaaaaaa gcaacgacct gaccaaatcg attttcagca
    11221 aacttacgcc cgcccaggtt tcacaggttt cccggcatcc gcagcgtccc tatactttgg
    11281 attacattga tgcgctgttt actgattttg aagagctgca cggcgaccgc cattttgccg
    11341 acgatcatgc gattgtcggc ggattggcgc gtttcaacgg acaaagcgtg atggtcgtcg
    11401 ggcatcagaa agggcgcgac accaaagaaa aaatccgccg caacttcggt atgccgcgcc
    11461 ccgagggcta ccgcaaagcc ctgcgcctga tgaaaacggc tgagaaattc ggcttgcccg
    11521 tcatgacctt tatcgatacg ccgggcgcgt atcccggcat cggcgcggaa gaacgcgggc
    11581 agtcggaagc catcggcaaa aacctgtacg aactgacgcg cctgcacgtc cccgttttgt
    11641 gtaccgtcat cggcgaaggg ggctcgggcg gtgcgttggc ggtcgccgta ggcgattacg
    11701 tcaatatgct gcaatactcg acctattctg ttatctcccc cgaaggctgc gcttcgattt
    11761 tgtggaaaac cgccgaaaag gcggcggatg cggctcaggc tttgggcatt actgctgacc
    11821 gcctgcaaaa gctggacttg gtcgataccg tcatcaaaga accattgggc ggcgcgcatc
    11881 gggatttcgg gcaaaccatg aaaaacgtaa aagccgtttt ggaaaaacaa ctgcacgaag
    11941 cgcaaagcat cccgcttgcc gatttgcttt cgcgccgttt cgaccgcatt atggcttacg
    12001 gcaaattttc ggaacaataa ttcaggtaga acaagcagca agcagtttgt ctgaaactgc
    12061 ttgctttttc tttatcggga cggaaccgtg ctgactttag atgcgtttga gcaatgcttg
    12121 aaggattgtt ttcctcaagg tctgaatgga aaaaaaacag cagtggcatt aagcggcggc
    12181 ttggattccg tcgttttgct gcatctgctt gtccgcgccg gaaaaaaggg cggttttatt
    12241 ccggatgcat tgcatatcca tcacggcttg agtccccgtg ccgacgattg ggcagatttc
    12301 tgccaaaact attgcgatat gctcggggtg gggctggaaa cggttaaggt ctgcgtggaa
    12361 aaaaacggtt tgggcatcga ggcggcggcg cggcaaaagc gttatgccgc gtttgccgaa
    12421 aaaggctttg acgttttggc gttggcgcac cacagggacg atcaaatcga aacctttatg
    12481 ctggcagtcg ctcgcggcgg cggtttgcgc gctttggcgg ctatgcccac cgtccgccct
    12541 tttggggaaa aaggcatcat ctggcggcct ttgctgcctt tttcgcgcca agacatatgg
    12601 gattatgccc aaaaacacgg tttgccgaat atcgaggacg aaagcaatag cgatacggct
    12661 tatttgcgaa accgcttccg gcaccgtatt ttgcccgaac tttcggcgca gattccccat
    12721 ttcgggcggc atgtactgaa caatgtccgc gctttgcagg aagatttggc tttgttggac
    12781 gaaatcatcg gtcaggactg ccgttgggtc tgtgaggaag gcagtttcga tacggtgcgt
    12841 tggcaggcgt tttccccacg ccggaaaacc catattttgc ggtatttttt gaaggaaaac
    12901 ggcatcccca tgccgaatca gaatgccctt gccgacattg cccgggtttt gacggaggca
    12961 aaaaccggac gttggaactt gcaaggcttt gaattgcatc attatgcagg caggctgttt
    13021 gtgttccgac tggaaaaaac ggataaactg cggtttttga aagacaggca gataagcgga
    13081 aatttaaggg aaatattgac ggggcaggga tttgttttaa aacgtcatcc gtttgggctt
    13141 cctgagcatc ttttggagca ggacggaatt ttgaggacgg tagcggtatc ggatacgttg
    13201 gctgtcggcg gcatccataa ggatgtgaaa aaaatccttc aggggaaacg ggttttgcct
    13261 gtcctgcgcc caatttggcc gcttgttgcc gacagcggaa accgtccatt ggcgttggca
    13321 aactgttgtg cggatttcca atactcggtt tcagacggca ttttgcccgt ccatcctgac
    13381 tttcccattt tattttgata atatcgcaaa cagatttcgg cggcgttcag acgggtattg
    13441 tccggttgca tatttctaaa aggcttgtga agtgaaacac atcagttcga ccaataatga
    13501 acacatccgg cacctgcacc gcctgttgtc gcaaggaaag ttcagacggc aatacgccca
    13561 aaccgttttg gagggcgtgc acctgcttca ggttttcctg caatccggca gaaaaccggt
    13621 cggggtatat attcccgagg gcaaaatgcc gtctgaagaa gtccgcaggc tgagggcggt
    13681 tgtgccggaa ggcaaggttt tttccgtttc agacggcata ttgaaaaaaa tcagcagctt
    13741 gacttgtgcg gatgatgtgc ttgcgctgat tgatattccg gatgcgggtg ctttgcctgc
    13801 cggcggcgac tgtgtggttt tggacggcgt gcaagatccg ggcaatgtcg gcaccgtctt
    13861 acggagtgcg gcggcggcag gggtaggtac ggtcgttttg ggcaggggtt gcgcggacgc
    13921 gtggtcgccc aaggtattgc gcgcggggat gggcgcgcat ttcttgtcgg gcatttatcc
    13981 gcaggcggat ttggaaatat ggttggcgcg ctataaaggc cgtgtgtttg ccaccgcctt
    14041 gcgcgaggaa aagcaggcgg ttttgtacgg cgaagatttg tgcggaccga cagcctgggt
    14101 gtttggcaac gaaggcgcgg gggtcggtaa agcggttttg gacagggcgg acaagtgtgt
    14161 caggattccg atgcacgatg caaccgagtc tttaaatgtc gcgatggcgg cgacaatctg
    14221 cctgtttgaa cagatgcggc agcggtcggc gtattgagga aaagaaatgc cgtctgaaaa
    14281 aatctattac ggcgtattga ttttcttatg tatcgcttct atgctgctgt cgccgttttt
    14341 ttatgcgggt gctttgaagc ccaagaaggc ggcattgcgg aaggacgggc agtggaaact
    14401 catcttattg tccaataccg tggcggcggc ggttttggct tgggtgtggt ggaaatggtt
    14461 ttgacagata ttgctcaaaa tcgtgctaat ggaatccgaa caaataaaga atttggtaaa
    14521 aaatttgtta aatcaacgaa ttaaagtttt gtggaaaaca aaacagctct aagcaaatag
    14581 ggcgtttgtc ggtaaatacg gaagagttgc ggcattatcg ggcatcttta acaagtagtg
    14641 ccgtcttggc aggcaatcgg tttttatggg cagcttgcaa aatcgcggat ataaaattgc
    14701 gaatcggtta aagtgtgggg acgctatgaa aaattgcgaa tttttttatg acccgacaag
    14761 ggcaatctat gatagcggtg cagattactt aactagggaa aaacatagat tagtcgtaat
    14821 tgcaaatagt gcttgggggc tattacttaa tttatcttgt tattatgacg aggttttgga
    14881 aaagcggaaa ataccgttcg gcaaacagga aattgatgac gatatggaca aagtgtccgc
    14941 ccttaagcgg aagtttaaag atatttctga aatcaaagta ggggatggtt gggaataccc
    15001 gttcaattat gagcagggaa tgaaagaatt agatgaagtg ctattgaaat acattccctt
    15061 ttttgaagaa gaacgataaa ggaggttgat atgcgcgtat ctaaaataat tggaagtatg
    15121 ttgcttgtta cagcggttca gaccgtattt tcggcaaatg tttacgcgtg ccgccataat
    15181 ggtaaaacca gttacagcca aactccggga aaacattgta ccaacgcggg tttggggcgg
    15241 gaccgggtgt acagttcggt tagaccggca gtaaaagaca gggcggaaga cgcaggggtc
    15301 ggcgattatt cggacacggt gagggacgaa cacgtccaaa atccgaaagg gaatgcacag
    15361 aaagacggtt cggatgccgg catcaggccg cattgattga aaccgaatca gccatgacgg
    15421 cgttgaataa tagaatttga acgattaggg aactctgatg aaacacatcc acattatcgg
    15481 tatcggcggc acgtttatgg gcgggattgc cgccattgcc aaagaagccg ggtttgaagt
    15541 cagcggttgc gacgcgaaga tgtatccgcc gatgagcacc cagctcgaag ccttgggtat
    15601 aggcgtacac gaaggcttcg acgcggcgca gttggaggaa tttaaagccg acgtttacgt
    15661 catcggcaat gtcgccaagc gcgggatgga tgtggttgag gcgattttga accgcgggct
    15721 gccttatatt tccggtccgc aatggctggc tgaaaacgtg ctgcaccatc attgggtact
    15781 cggtgtggcg gggacgcacg gcaaaacgac caccgcgtcc atgctcgcat gggttttgga
    15841 atatgccgga ctcgcgccgg gcttccttat cggcggcgta ccggaaaact ttagcgtttc
    15901 cgcccgcctg ccgcaaacgc cgcgtcaaga cccgaacagc caatctccgt ttttcgttat
    15961 cgaagccgac gaatacgaca ccgccttttt cgacaaacgc tccaaattcg tacattaccg
    16021 cccgcgtacc gtcgtgttga acaatctgga attcgaccac gccgacatct ttgccgactt
    16081 gggcgcgata cagacccagt tccaccacct cgtgcgcacc gtgccgtctg aaggcttaat
    16141 catctgtaac ggacagcagc aaagcttgca ggatacttta gacaaaggct gctggacgcc
    16201 ggtggaaaaa ttcggcacgg aacacggctg gcaggccggc gaagccaatg ccgatggctc
    16261 gttcgacgtg ttgcttgacg gcaaaaaagc cggacacgtc gcttggagtt tgatgggcgg
    16321 acacaaccgc atgaacgcgc tcgccgtcat cgccgccgcg cgtcatgccg gagtcgacat
    16381 tcagacggcc tgcgaagcct tgagcacgtt taaaaacgtc aaacgccgca tggaaatcaa
    16441 aggcacggta aacggcatca ctgtttacga cgacttcgcc caccatccga ccgccatcga
    16501 aaccaccata gaaggtctgc gtcagcgcgt cggaaacgcc cgcatcctcg ccgtcctcga
    16561 gccgcgttcc aacacgatga agctgggcac gatgaagtcc gccctgcccg aaagcctcaa
    16621 agaagccgac caagtgttct gctacgccgg cggtgtggac tggaacgtcg ccgaagccct
    16681 cgcacctttg ggcggcaggc tgcacgtcgg caaggatttc gatgccttcg ttgccgaaat
    16741 tgtgaaaaac gcccgaaccg gcgaccatat tttggtgatg agcaacggcg gtttcggcgg
    16801 aatacacacc aaactgctgg acgctttgag atagcccggg cgatgccgtc tgaaagccct
    16861 tcagacggca tcgtccggct gcgcggcaca aaggcggaaa aaccgtttgc cccgtatttt
    16921 caaacgcgtt acacttgccg ccgctgtttt cagccatttg attacccgca accgccgtca
    16981 ttgcgccggc ggtttgcctg tcagcgtcat tgcgccgctg taaatacgaa agaacacatt
    17041 atgaccgtat cccccgtcgc cttgcgccgt aagaccgagt gcaagcctca tcccaccgcg
    17101 cgctattgga aaaaatgcga tgtcgaagcc ctgttcggac ttcccttcct cgacctcatt
    17161 taccaagccg ccgaaatcca ccgccaaaat ttcaacccgc gcgaaatcca gctttccacg
    17221 ctgttgtcca tcaaaaccgg cggctgtccc gaagattgcg cctactgtcc gcaatcggcg
    17281 caccacaaca ccaatctggg caaagaacag atgatggatg tggatgaaat cgtcgaaaaa
    17341 gccaaaatcg ccaaatcgcg cggcgcaagc cggttttgca tgggcgcggc gtggcgcggc
    17401 cccaaaccca aagacgtgga gacggtttcc gcaatcatca aagccgtcaa gggcttgggt
    17461 atggaaacct gcggcacgtt cggtatgctc gaagaaggta tggcggaaga cttgaaagag
    17521 gcgggcttgg attattacaa ccacaacctc gacaccgacc ccgaccgcta caacgacatc
    17581 atccatacac gccggcatga agaccgtatg gacaccttgg gcaaagtccg caacgccggt
    17641 ttgaaagtct gctgcggcgg catcgtcggg atgaacgaaa cccgcgccga acgcgcaggg
    17701 ctgattgcca gcctcgccaa cctcgacccg cagcccgaaa gcgtgccgat taaccggttg
    17761 gtcaaagtgg aaggtacgcc gcttgccgat gccgaggatt tggactggac ggaatttgtc
    17821 cgcaccatcg ccgtggcgcg gattacgatg ccgcaaagtt atgtccgact gtcggcaggg
    17881 cgcagcaata tgccggaagc gatgcaggcg atgtgcttta tggcgggcgc gaactcgatt
    17941 ttttacggcg acaagctgct gaccacgggc aatccggatg aagacggcga cagaatcctg
    18001 atggaaaagc tcaacctgta tcccttacag tttgagctgg aaggcgaggt cgccgaagtg
    18061 gaaaaagcct ctgggattaa agtggattat tgacgattgc aaaaatgccg tctgaaaccc
    18121 gaaaaaaggc tttcagacga catttgttcg gacggtattt ccaatatctt tttaccggcg
    18181 cgtgatgttg ccgtcgggcg agacatccag cccgttctcg ttggggaagt cgctgcggtt
    18241 cagataaata atccgcccga taacggtttt tcagggtcga ttttggggat tttatcgtcg
    18301 gcttgggtaa tagggatgat agttccggaa ataaatttac cctgtttgtt ggtgataatt
    18361 ttgaaaatcg gcgcaatgcc gctgatgccg gaggtgttga ttgcgccgta ggtggcaaag
    18421 ttgccgccgc tgtaagagat gaagcggtcg cggtaaagtt cgacggcgcg tgtaacgtgc
    18481 ggcccctgcc cgaatacgac atccgcgccg gaatcgacgg caagccgtgc aaactcgacg
    18541 acgttgcccc tgttttcccc atagaagatt tcggtatcga acggcaggtg ttccgcctgt
    18601 ttcccttccg cgccgccgtg gaacattaca atgacgatgt cggctttctg tttggttttg
    18661 gtaatccgtt ttctaacttt ggcataatcg ttcagtttga cggcggcaag gttgggggcg
    18721 aaggagacga agccggatct tacgccgttt ttcttcagga tggcggtttc aaacctgttt
    18781 tcgatgcccg aatatttgat gttcaattcg tcaaggttcg ccctttatgc cgtttccgca
    18841 ccgcaaaccg ccggggtcaa gccctcggcg catcctgccg gaacggaatc cccgtgctgc
    18901 cgattgacgg ttcaaacccc gcgcccgttt caaataccgg cgatgtggac ggacaggatg
    18961 cgcctgacga aaagacagcc gataccgttt ccattatcgg cgtgggcgac attatgctcg
    19021 gcagcaatta tccggtcgat tacctgcccg ataccaatat tctgaaaaac gtcgaatctg
    19081 ccttgcaaga cgcggacatt accgtcggca acctcgaagg cacgctgttt gacgaaggcg
    19141 gtacgccgaa aaaatgtgca accccccaaa atatgctatg cattccgaac gccctccgca
    19201 tacgggcaat accttgccga cgcgggattc gactacctca gcttcgccaa caaccacagc
    19261 aacgacttcg gcgcgcaagg catcacggca acggcggcgg gcggcagctc ttttacatac
    19321 tcaatcgcgc taaagccgct gccgataacg aggccaaaat tgcggaaaat accgccatcg
    19381 cccagataaa tttgtccatc atcagacctt tactgttcag acgagacagc atttgccgca
    19441 cgttttgggg cttatctttc gatttgcgct acgtcgcgca ccgcgccttt gtcggcggaa
    19501 gtcgccatcg cgccgtaagc ccttaatgcg gcggagacgt agcggtcgcg gttttccggt
    19561 ttccacgctt tgctgccgcg tgcttccatt tcggcacggc gcgcggcaag ctcttcatcg
    19621 gaaatgacaa ggtggatgct gcggttgggg atgtcgattt cgacggtatc gccttcgtgt
    19681 accaaaccga tcgcgccacc ttccgccgct tcgggcgagg cgtgtccgat ggacaaacct
    19741 gatgtgccgc cggagaagcg tccgtcggtt aagagagcgc aggctttgcc gaggccttta
    19801 gatttcaggt aggaagtcgg atacagcatt tcctgcatgc ccgggccgcc tttcgggcct
    19861 tcgtagcgga tgatgacgat gtcgccggcg acgatttggt tgcccaaaat gccttcgaca
    19921 gcggcttcct ggctttcaaa cacgcgcgcg cggccggtga atttgaggat gctctcgtcc
    19981 acgcctgcgg tttttaccac gcagccgcgt tcggcgatgt tgccgaacaa gaccgccaaa
    20041 ccgccgtctt gcgagtaggc gtgtgccacg tcgcggatac agcctttttc gcggtcgagg
    20101 tcgagtgttt tccacatacg gttttgcgag aacgcttggg tggtgcgtac gccgccgggc
    20161 gcggctttga agcgttcgat ggcgcgggtg ttttcagggt tggttacgtc ccatttttca
    20221 atcgcgtctt tcagcgtcgg tgcgtggata gtgtgcacgt cggtgtgcag cttgcccgct
    20281 ttgtccaatt ctttcaggat ggcgaagatg ccgccggctc ggtgcacgtc ttccatatag
    20341 tagtcgtggt tgttgggtgc ggttttgcag atgcagggca caacgcggct taagcggtcg
    20401 atgtctgcca ttttgaaatc cacgcccgct tcgttggcaa cggcgagtaa atgcaaaata
    20461 gtgttggtgc tgccgcccat cgcaatatcc atcgtcatag cgttttcaaa cgcttttttg
    20521 gtggcaatgc tgcgcggtaa cacggtttca tcgttttgct cgtaatagcg tttggtgatt
    20581 tcgacaatca tacggccggc ttcgaggaac aattctttgc ggccggcgtg ggtcgccaaa
    20641 tacgaaccgt tgccgggtag ggacagaccg agtgcttcgg tcaggcagtt catcgagttt
    20701 gccgtaaaca tacccgaaca cgagccgcag gtcgggcagg cgttttgttc gacttcttca
    20761 acttgccggt tgctgacatt gtcgtccgcc gattcaatca tcgcgtcaat caagtccaaa
    20821 cggcgttcgg gctggatgtt tgccacgccg ataactttac ctgcttccat cggaccgccg
    20881 gaaacgaaga tggtcgggat gttcaggcgc atcgcggcaa tcagcatgcc cggggtgatt
    20941 ttgtcgcagt tggaaatgca caccagcgcg tcggcgcagt gggcattgac catatattcg
    21001 atggagtcgg caatcaaatc gcggctgggc agggagtaca gcatgccgct gtgtcccata
    21061 gcgatgccgt cgtcgatggc gatggtgttg aattctttgg cgatggcgcc ggctttttcg
    21121 atttcgcggg caaccagctg gcccatattg tgcaggtgga catggccggg cacgaattgg
    21181 gtgaaggagt tggcaacggc gatgatgggc ttgccgaagt cggtttccat cacgccggtg
    21241 gcgcgccaca atgcacgtgc gcccgccata ttgcggccgt gggtggaggt tttggagcgg
    21301 tattctggca tagtgtgttt ccttgtgcct ataccgtctg aaagacaggg ctgtttcaga
    21361 cggtatcggg tacggttttt tagagtggga aaagagggta ttttatacca agtatcggaa
    21421 ttttgcggga ttgaaacggc gtgcggcaaa aaagaaaatc cccgcaggaa tgcggggacg
    21481 ggttcaggcg cgggcaatcg cgacggcttt ggatgcgtcc caaaaatcaa cgggtgcatt
    21541 taatacgggt ttgacgatgc ccgtccgtat ggcgaaatcg ccgaaacctt cgccgatatt
    21601 gcgttctgcc gcccatttgc cgatcaggtc gtccaattcg gcaaggattt cgggcagggt
    21661 gatgttttct ttataaaggc gggggatgcg tacgccttca cggtcgccgc cgatatggag
    21721 gttgtagcgt tcgacggctt tgccgaccag cccgatttcc gccaacattg cccgtccgca
    21781 gccgttgggg cagccggtaa tgcgggtaac gatgtagtcg tccgacgtgc cgtgtttcgc
    21841 cataatctta tccagctcgt cgatgaagtc cggcagcacg cgttcggctt ccgccattgc
    21901 cagcgggcag gtcgggaagg aaacgcacga catcgcattt tcgcgcagtt tgctgacatc
    21961 gttgcggatt aatccgtatg ttcgggcaag ttcttcgatt tttgctttgt ctgcttcggc
    22021 gacatttgcc acgatgaggt tttggttggc ggtaatgcgg aaatcgcctt tgtggatttt
    22081 ggcgatttcc aacacgccgg tcagaagctg tttcccgcct tcgtcaacca aacggccgct
    22141 ttcgatgaaa agggtcaaat gccagttgcc gtctatgcct tttacccagc cgatgcggtc
    22201 gccgcgcccg gtaaatttga acgggcgtat gggttcgaac ggcataccca tacggcgttc
    22261 gacttcggcg cggaagttgt ccaagcccat attttgaatg gtgtagcggg tgcgggcgtt
    22321 tttgcggtcg ctgcggttgc cgaagtcgcg ctgtgtggtt accaccgctt cggcggcctt
    22381 cagcgcgtgt tccggaggta cgaaacccag ttccagtgaa atgttcggat aggttttggt
    22441 gttgccgtgt tccattgaaa gcccgccgcc tgccaaaaca ttaaaaccgg caagctgtcc
    22501 gccgccgtct gaaatggcga caaaatccaa gtcgttgccg tagcagtcca catcatttaa
    22561 gggcgggatg acgactgcgg ttttgaattt gcgcggcaga taggttttgc ccaaaatcgg
    22621 ctcgtcttct tgaaggaagt cgtcggaact ttgaactttt ttgccgtcca cccacacatc
    22681 cagataaccg cgcgtgcgcg gcagcaggtg ttcggaaatc tttttcgcgt attcgtaagc
    22741 ctgccggtgc agttcggact cgatcgggtt ggacgtgcaa agcacgttgc ggttcatatc
    22801 cgccgccgtg gcgatggaat ccaaacccag tttgtgcaag aggcggtgca tcgtctgcaa
    22861 cttggctttc ggcacgccgt gaaattggaa ggtttgccgg ttggtcagcc ggatggagcg
    22921 gtaatgactg ttttcccggg caaatttgtc cagttctatc cattgggacg gtttgatgat
    22981 cccgcccggc agtcggcagc gcaaaagcat aaatttcaaa ggctcgagtt ttgcctcggc
    23041 gcgttcggcg cggatgtcgc ggtcgtcctg ctcatacata ccgtggaagc ggatgagttg
    23101 gaagttgtcg cctttgaagc cgcccgtgag cgggtctttc aaatcgtcca aaatcgtgcc
    23161 gcgtaaaaaa ttgctttcgg ttttcagacg ttcgttgtcg gatagcggtt tttcttgcca
    23221 cgccaaacct tttgtcttgg tctgtacggt cattttgtgt tcctcccgat tatatttaat
    23281 caataaacat cacgctgata gcgtttttct tcgcgcagca tatccaaata ttcttctgcg
    23341 ccctcttcgt ccaaatgtcc tgccccgata atcacatcca gcaaggcggc ttccacgtct
    23401 tttgccattt ttgccgcatc gccgcacaca tagatatgcg cgccttcctg cagccattgc
    23461 caaagtcctt ccgcctgttc gcggattttg tcctgcacat agattttttc ttcctgatcg
    23521 cgcgaccagg cgaaatcgta tctgtgcagg aagccgtctt tggcaaactg ctgccattcg
    23581 gtctgataga ggaagtcggc ggcaaaatgc ggattgccga aaatcagcca gtttttgcct
    23641 tccgcatttt ctgcggcacg ttgttggacg aaagcgcgga acggtgcgac gccggtgccc
    23701 gagccgatca tcacaatcgg cttgcggctg tcttcgggca gcctgaagcc gtcgttgcgt
    23761 tccacaaaca cgcgcaccgt gccgtcctct tccagccggt cggcaaggaa acccgatgcg
    23821 ccgcccgctc tggcgcgccc ttcgtgttca aaacgcaccg cgccgacggt caggtgcact
    23881 tcgtccccca cttccgcctg cgacgaggaa atcgaataca ggcgcggcgc aagcgggcgc
    23941 agcaggccgg cgaattgttc cgccgtcagt tttgcaggga agcggtgcag cacatcggca
    24001 atcggcgtgc tttgcacaaa gccttgcaaa acggcgttgt cggcagcaat acggtcgagt
    24061 tcgtcatcat cggcgaacga ggcatagcct ttgacaaagg cgggggtgtt ttgcgtgagt
    24121 tcaaaatggg ataacagtgc ggaggcaacc ggcagggttt ttccgcccgc ctgtatttcc
    24181 gttgcctgat cgatgccgag caggtctagg atttccctga ccagtgccgg atcgttgtca
    24241 aaccaaacgc cgagcgcgtc gcccgggagg tagtgcaaat ccgaaccgct caaatcgatt
    24301 tcgatgtggc gcacgtcttt atcggattgg cgggcggtga ttttctgatt ggccagcagg
    24361 gcggcgggaa agggggctgc cttgcagtac ctgccctccg atgccgtctg aaggtcggcg
    24421 gggggcgttg cctgcggcgc gggcgttgcc cggttttttg cggcttcttc ttttaagagt
    24481 gcggcgatat tgtctgtcca ggcgtttgcg gaggcggtaa agtccaaatc cgcatcaacg
    24541 cgttcgagca ggcgtttcgc ccccaattct tcaaaacgtt tgtcgaaatc tttgcccgcc
    24601 cggcagaaat tcggatagga actgtcgccc aaacccagta cggcaaattg gagtttgtcc
    24661 aatttcgggg cttttttgcc gttcagcagt ttgtgcagca cgacggcttc ttccggcggt
    24721 tcgccttcgc cttgggtgga cgtaaccagc agcaggcggc gttcgccggc gatgtttttc
    24781 gccttatagt ctttcagttc ggcgcgactg acttggatgc cggcggcttc caggctgtcc
    24841 gccgctttgt cggcaacgga tttcgcattg ccggtttgcg aggcggaaag gacggttacg
    24901 gaaaaaggtt ctgccgtcgg caatgccgtc tgaagcgcgg gcagtcctgc agatgccccg
    24961 tttcctgctt ttgcccaagc gtagccggac agccacgccc attgtgccgc gtccagcccc
    25021 gacaggagct gcgtgatttc gggcggcaga ggcggtaatg gcggatttgt gttctgcata
    25081 tcgtgttcac tcataaaatc atacctgccg caacagtgcc gtatgtcgct tcgtctatca
    25141 ggataaacga accggcggcg gtgttttccg cataaggcgt tgccgtaacg ggtttttgaa
    25201 ggttgatgcg gactttggcg atgtcgttca tcttcaagga ttccgcgccg gcctcttgtt
    25261 ccagcgtgcg gacatccaaa acgctttcaa tttccccgac ttttgccggc acggtttgcg
    25321 tgccgtgctt gagcaggtat ttgcgcgcgg tgttgagcgg acgttcgtca aaccagcaaa
    25381 gcgtggcttc cagatgtttt tgcggggcga gcggggaatt tttatcgaca aaaaggtcgc
    25441 cgcgcgaaac atcgatgtcg cggtccagcc ggagggttgc cgcctcgccg gcaaaagcct
    25501 gcgccacttc ccctttcggc gtgatgattt cggacacttc ggcggtcagc ccgttcggtt
    25561 cgatgcggac ggtttgcccg acggcgaccg aaccgcgttc gatgcgcccc tgatagcctc
    25621 ggaaatcatc ggccttgtcg gcatcttggc ggacgaccag ttggacgggg aaataaaaat
    25681 cggcagcgga acgaccggtt tcgtccgccc ccggcaggtt ttccaaaatg gacaataagg
    25741 gttcgccttt ataccaaggc atattgccgc cggggtaaac gatgttgtcg cccaagagtg
    25801 cggacaccgg tacgaaatgc acgtctttca aaccgagctg ttcggcaagt cggcggtatg
    25861 cctccacaat ggcgttgaat ttgtcttcgc tgtaatccag caggtccatt ttgttgaccg
    25921 ccaccacaat atgcgggcag ttgagttggc ggaggatggc ggaatggcgt ttggtctgcg
    25981 gcagaagctg caagggctgc gcgccgaaat ccagttggga tgcgtcaacc agtacgactg
    26041 ccgccgaagc ggtgcttgcg cccgtaacca tattgcgcgt gtattgttcg tgccccggcg
    26101 tgtcggcgat gatgaatttc cgtttcgccg tggaaaaata gcggtatgcc acatcgatcg
    26161 taatgccctg ttcgcgttcg gcttccagtc cgtcggtcag gatggagaag tctatggttt
    26221 ctttcaaacc gttgcttttg ccggattcca aggttttgat ttggtcggac agcagggctt
    26281 tgctgtcgta gagcagtcgt ccgattaggg tgcttttgcc gtcatcgacg ctgccggcgg
    26341 taatgaagcg gagcggggtt tggtgttgtg ccgtcatatt ttcttcctca tatctgctta
    26401 aagggttttt gaaatttaga aatagccttc ttttttgcgt ttttccattg ccgcctcgct
    26461 tgcctgatcg tccagccggg tcgcgctgcg ttcggaaatg tcggcaaccg ccgtttccct
    26521 gataatctcc gtcggcgtgg acgcggtgct ttctaccggg caggtgcagc tgatgtcgcc
    26581 gacggtgcgg aagcggacat caaggatttc ggaggtttca gacggcattt tcggcgtaag
    26641 cggcgtaacg gggaccagca gccccctgcg tctgaccact tcgcgcctgt ggctgtaata
    26701 aatcggcggc agttcgaggt tttcgcgggc gatgtattgc cagatgtcga gttccgtcca
    26761 gttggaaatc gggaagacgc gcatattttc gcctttgtgc agcctggtgt tgtacagcga
    26821 ccacagctcg gggcgttgcg ccttcggatt ccattgtccg aactcgtcgc ggaacgagaa
    26881 aatccgttct ttggcgcggg ctttttcttc gtcgcgccgc gcgccgccca tcagcgcgtc
    26941 aaagccgttt gcctcgatgg tttccaacag cgtaaccgcc tgcgccgcat tgcgcgaatc
    27001 ggtttctttg cgtaaaacta ctgtgccttt ggcgatggag tcttccacgc gccccactat
    27061 caggcgggca ttgagttttg ccgcctgcgc gtcgcggaag gcaatcactt cgggataatt
    27121 gtgtcccgtg tcgatatgca ccagcgggaa gggcagtttt accggcctgc tgcccagccg
    27181 gaaggctttg caggcgaggg cgagcaggac cacggaatct ttgccgccgg aaaagagcag
    27241 ggcggggttt tcgcattctg ccgccacttc gcggataatg tggatggatt cggattccaa
    27301 ccagtcgagt tgggcgttgt tcggttcggt tttcgtcata ccatattcct tatttcttct
    27361 gtctgatatt tatgaattat ttgtgcagcc cgcattcttt gctgtttctg ccttcccacc
    27421 accaccgccc tgcgcggatg tcttcgcccg ccttgacggg gcgggtgcag gggtcgcagc
    27481 ctatgctggg aaatccttgc cggtacaaat cgttgtaagg cacattgttg gcgaggatgt
    27541 atgcccacac gtcgtgttcc gaccagtcga aaatcgggtt gtatttgccg atgccccgtc
    27601 cggcatcgta ttcggcaaac ggcagttccg tgcgtgtggc ggattgttcg cggcgttgcc
    27661 cggtaagcca ggcgtccgcg cctgcaatgg cgcggttgag cggttcgatt tttcggatgc
    27721 ggcagcattc gcggcgcgct tcaacgctgt cgtaaaaggc aaacctgcct ttgctttcca
    27781 cataatgcag ggcatcttcc cgtatcggtt ggaaacgctt gatttgcata tgcggataaa
    27841 cacgttcaat cctatccaac aggtttaaag tttccgcgtg cagcagcccc gtatccaaag
    27901 taaaaatacc gatattgagg ttttctccgg cgataaggtc ggtaattacc atatcttccg
    27961 cagcaaggct gctggcaaac cgtgcatccc ggtggctgcc ggcaatccgg tgcaggcgtt
    28021 gtttgagggt ttccgttttt tccgcaaggg cggtttcgct gccggatccg atatgcggta
    28081 tctgccacag ggcgggtttg agcagtgtcg tttccatttt tcccgcctta tgccgcccgt
    28141 tgtccggcat tcagtccgcc caatgcggga tacgcctgcc cgacccggtt ttctccttcg
    28201 ccgttttcac cgaaccaggc gagtttttcg tgcagcccca ccacttcgcc tatgacaatc
    28261 aatgccggat tcggcgcggt ttcggcgagt tcggcaaggt tggcgagcgt gccggttgcg
    28321 gttttttgag ccggcaacgt gccttggctg atgacggctg ccggcgtgtc gggcgagcgt
    28381 ccgtgctgtt gcagccgttc ggcaatcagg gcggctttga gcgcacccat ataaatcacc
    28441 aaggtctggc ggctgcgggc gagggtctgc cattcgatgt cgggcgcatc cgccttgcgg
    28501 tggccggtta cgaaaaccgc actttgggca taatcgcggt gcgtgagcgg gatgccggca
    28561 taggcggtcg cgccgacggc ggcggtaatg ccggggacga ccgaaaacgg aatctgatgg
    28621 cgtgccaagg tttccaattc ttcgccgccg cgtccgaaca cgaaagggtc tccgcctttc
    28681 aaacgcacca cgcgcctgcc ttcgcgggcc agcctgacca taagcgcatt ggtgtcctct
    28741 tgcggggtgc ggtcgccccg ggcgcgcttg ccgacaaaaa tccgttccgc atcgcggcgg
    28801 acgagggaca gtatgccgtc tgaaaccagc gcgtcgtaaa gcaccacgtc tgcctgctgg
    28861 atttcctgta gccctttgag cgtcagcagc cccgcatcgc cgggacccgc gccgaccagc
    28921 gagacggagc cgccttgatc attttgacga ctttgttcca attggcctgc caattcccgt
    28981 tcggcaaggg tgttttgccg gtttttgacg agggcggcga aacgtccgtt aaactgcttt
    29041 tcccaaaagc ggcggcgttc ggtaacggat ttcagtttgt ccttgacggc atcgcgccac
    29101 cttcctgaaa tttccgccat atcgcccaaa gacggcggca gcagggcttc cagcctttca
    29161 cgcagcagtc gggcgaggac gggcgcgctg ccggagctgg aaacggcaat ctgaaccggg
    29221 ttgcggtcga taaccgacgg gaagatgaag ctgcaatggt cgcggtcgtc caccacgttg
    29281 accggctttt ggcagctttc ggcaagatgg aaaacgcgcc ggttgagggc ttggtcgctg
    29341 cttgccgcaa tgatgaggaa aactgtgcgg atgtgttcgg cacgaaattc ttcggcaagc
    29401 cacaggattt tgttttccgc cgccaacgcg gagagttcgg cattcaggtg ttttgcggca
    29461 accctgacct ctgcgcccgc cttcagcagc aggctgattt tgcgtgcggc gaccgcgccg
    29521 ccgcctacga ccaatacggg gcggccggcg aggttggcga aaatagggaa ataattcact
    29581 ggctgactcc tttgctgttt gcccgcacct tgtttccgat acggtgcgtc gcggcatttt
    29641 tgtcggaatg cgggtcattt tagacaaaag gattttcccg gttaaataat aaaaaggcat
    29701 ttgttagaag ctgaaagcta tatgagggcg gctgcggatg cggcggtttt c
//
LOCUS       DBBZXU010000011        29237 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.011, whole genome shotgun sequence.
ACCESSION   DBBZXU010000011 DBBZXU010000000
VERSION     DBBZXU010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 29237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29237
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.011"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            25..1107
                     /gene="mraY"
                     /locus_tag="ACJJDE_000422"
     CDS             25..1107
                     /gene="mraY"
                     /locus_tag="ACJJDE_000422"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009310927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HGG7540410.1"
                     /translation="MFLWLAHFSNWLTGLNIFQYTTFRAVMAALTALAFSLMFGPWTI
                     RRLTALKCGQAVRTDGPQTHLVKNGTPTMGGSLILTAITVSTLLWGNWANPYIWILLG
                     VLLATGALGFYDDWRKVVYKDPNGVSAKFKMVWQSSVAIIAGLALFYLAANSANNILI
                     VPFFKQIALPLGVAGFLVLSYLTIVGTSNAVNLTDGLDGLAAFPVVLVAAGLAIFAYV
                     SGHYQFSQYLQLPYVAGANEVVIFCTAMCGACLGFLWFNAYPAQVFMGDVGALALGAA
                     LGTVAVIVRQEFVLVIMGGLFVVEAVSVMLQVGWYKKTKKRIFLMAPIHHHYEQKGWK
                     ETQVVVRFWIITIVLVLIGLSTLKIR"
     gene            1222..1494
                     /locus_tag="ACJJDE_000423"
     CDS             1222..1494
                     /locus_tag="ACJJDE_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HGG7540411.1"
                     /translation="MKQTVKWLAAALIALGLNQAVWADDVSDFRENLQAAAQGNAAAQ
                     YNLGAMYYKGRGVRQDLVLAQEWFGKACQNGDQDGCDIYQRLKAGY"
     gene            1584..2921
                     /gene="murD"
                     /locus_tag="ACJJDE_000424"
     CDS             1584..2921
                     /gene="murD"
                     /locus_tag="ACJJDE_000424"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HGG7540412.1"
                     /translation="MTLENKKILVAGLGGTGISMIAYLRKNGAEVAAYDAELKPERVS
                     QIGKMFDGLVFYTGRLKDALDNGFDILALSPGISERQPDIEAFKQNGGRVLGDIELLA
                     DIVNRRGDKVIAITGSNGKTTVTSLVGYLCIKCGLDTVIAGNIGTPVLEAEWQREGKK
                     ADVWVLELSSFQLENTESLRPTAATVLNISEDHLDRYDDLLDYAHTKAKIFRGDGVQV
                     LNADDAFCRAMKRAGREVKWFSLEHEADFWLERETGRLKQGNEDLIATQDIPLQGLHN
                     ATNVMAAVALCEAVGLPREALLEHVKTFQGLPHRVEKIGEKNGVVFIDDSKGTNVGAT
                     AAAIAGLQNPLFVILGGMGKGQDFTPLRDALAGKAKGVFLIGVDAPQIRRDLDGCGLN
                     MTDCATLEEAVQTAYAQAEACDIVLLSPACASFDMFKGYAHRSEVFIEAFKAL"
     gene            3058..4371
                     /locus_tag="ACJJDE_000425"
     CDS             3058..4371
                     /locus_tag="ACJJDE_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HGG7540413.1"
                     /translation="MTGGFLKISEVLVKVGDGVHTLLLDRQIVRDGRKFDAPLLWMVV
                     LMTAFSLLMIYSASVYLASKEGGDQFFYLTRQAGFVVAGLIASGFLWFLCRMRTWRRL
                     VPWIFALSGLLLVVVLIAGREINGATRWIPLGPLNFQPTELFKLAVILYLASLFTRRE
                     EVLRSMESLGWQSIWRGTANLIMSATNPQARRETLEMYGRFRAIILPIMLVAFGLVLI
                     MVQPDFGSFVVITVIAVGMLFLAGLPWKYFFVLVGSVLGGMVLMITAAPYRVQRVVAF
                     LDPWKDPQGAGYQLTHSLMAIGRGEWFGMGLGASLSKRGFLPEAHTDFIFAIIAEEFG
                     FFGMCVLIFCYGWLVVRAFSIGKQSRDLGLTFNAYIASGIGIWIGIQSFFNIGVNIGA
                     LPTKGLTLPLMSYGGSSVFFMLISMMLLLRIDYENRRKMRGYRVE"
     gene            4375..5442
                     /gene="murG"
                     /locus_tag="ACJJDE_000426"
     CDS             4375..5442
                     /gene="murG"
                     /locus_tag="ACJJDE_000426"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HGG7540414.1"
                     /translation="MGGKTFMLMAGGTGGHIFPALAVADSLRARGHHVIWLGSKDSME
                     ERIVPQYGIRLETLAIKGVRGNGIKRKLMLPFTLYQTVREAQRIIRKHRVECVIGFGG
                     FVTFPGGLAAKLLGVPIVIHEQNAVAGLSNRHLSRWAKRVLYAFPKAFSHEGGLVGNP
                     VRADISNLPAPAERFQGRKGRLKILVVGGSLGADVLNKTVPQALALLPDNARPQMYHQ
                     SGRGKLGSLQADYDALGVKAECVEFITDMVSAYRDADLVICRAGALTIAELTAAGLGA
                     LLVPYPHAVDDHQTANARFMVQAEAGLLLPQTQLTAEKLAEILGSLNREKCLKWAENA
                     RTLALPHSADDVAEAAIACAA"
     gene            5597..7006
                     /gene="murC"
                     /locus_tag="ACJJDE_000427"
     CDS             5597..7006
                     /gene="murC"
                     /locus_tag="ACJJDE_000427"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008763 - UDP-N-acetylmuramate-L-alanine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HGG7540415.1"
                     /translation="MMKNRVTNIHFVGIGGVGMSGIAEVLHNLGFKVSGSDQARNAAT
                     EHLGSLGIQVYPGHTAEHVNGADVVVTSTAVKKENPEVVAALEQQIPVIPRALMLAEL
                     MRFRDGIAIAGTHGKTTTTSLTASILGAAGLDPTFVIGGKLNAAGTNARLGKGEYIVA
                     EADESDASFLHLTPIMSVVTNIDEDHMDTYGHSVEKLHQAFIDFIHRMPFYGKAFLCI
                     DSEHVRAILPKVSKPYATYGLDDTADIYATDIENVGAQMKFTVHVQMKGHEQGSFEVV
                     LNMPGRHNVLNALAAIGVALEVGASVEAIQKGLLGFEGVGRRFQKYGDIKLPNGGTAL
                     LVDDYGHHPVEMAATLAAARGAYPEKRLVLAFQPHRYTRTRDLFEDFTKVLNTVDALV
                     LTEVYAAGEEPIAAADSRALARAIRVLGKLEPIYCENVADLPEMLLNVLQDGDIVLNM
                     GAGSINRVPAALLELSKQI"
     gene            7119..8033
                     /locus_tag="ACJJDE_000428"
     CDS             7119..8033
                     /locus_tag="ACJJDE_000428"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008716 - D-alanine-D-alanine ligase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HGG7540416.1"
                     /translation="MQNFGKVAVLMGGFSSEREISLDSGTAILNALKSKGIDAYAFDP
                     KETPLSELKAQGFQTAFNILHGTYGEDGAVQGALELLGIPYTGSGVAASAIGMDKYRC
                     KLIWQALGLPVPEFAVLHDDTDFDAVEEKLGLPMFVKPAAEGSSVGVVKVKGKGRLKS
                     VYEELKHLQGEIIAERFIGGGEYSCPVLNGKGLPGIHIIPATEFYDYEAKYNRDDTIY
                     QCPSEDLTEAEESLMRELAVRGAQAIGAEGCVRVDFLKDTDGKLYLLEINTLPGMTSH
                     SLVPKSAAVTGVGFADLCIEILKTAHVG"
     gene            8023..8751
                     /locus_tag="ACJJDE_000429"
     CDS             8023..8751
                     /locus_tag="ACJJDE_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HGG7540417.1"
                     /translation="MWDNAEAMERLTRWLLVMMAMLLAASGLVWFYNSNHLPVKQVSL
                     KGNLVYSDKKALGSLAKEYIHGNILRTDINGAQEAYRRYPWIASVMVRRRFPDTVEVV
                     LTERKPVARWGDHALVDGEGNVFEARLDRPGMPVFRGAEGTSAEMLRRYDEFSTVLAK
                     QGLGIKEMTYTARSAWIVVLDNGITVRLGRENEMKRLRLFTEAWQHLLRKNKNRLSYV
                     DMRYKDGFSVRYASDGLPEKESEE"
     gene            8837..10081
                     /gene="ftsA"
                     /locus_tag="ACJJDE_000430"
     CDS             8837..10081
                     /gene="ftsA"
                     /locus_tag="ACJJDE_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HGG7540418.1"
                     /translation="MEQQQRYISVLDIGTSKVLALIGEVQDDDKINIVGLGQAPSRGL
                     RAGMVTNIDATVQAIRQAVNDAELMADTKITHVTTGIAGNHIRSLNSQGVVKIKDGEV
                     TQADIDRAIETAKAINIPPDQKILDAVVQDYIIDTQLGVREPIGMSGVRLDTRVHIIT
                     GASTAVQNVQKCIERCGLKSDQIMLQPLASGQAVLTEDEKDLGVCVIDIGGGTTDIAV
                     YMNGAIRHTSVIPAGGNLITKDLSKSLRTPLDAAEYIKIHYGVASCDTEGLGEMIEVP
                     GVGDRTSRQVSSKVLAAIISARIQEIFGVVLGELQKSGFPKEVLNAGIVLTGGVSMMT
                     GIVEFAEKIFDLPVRTGAPQEMGGLSDRVRTPRFSTAIGLLHAACKLEGNLPQPENGA
                     VQEREGGGGLLARLQRWIENSF"
     gene            10200..11378
                     /gene="ftsZ"
                     /locus_tag="ACJJDE_000431"
     CDS             10200..11378
                     /gene="ftsZ"
                     /locus_tag="ACJJDE_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HGG7540419.1"
                     /translation="MEFVYDVAESAVSPAVIKVIGLGGGGCNAINNMVANNVRGVEFI
                     SANTDAQSLAKNHAAKRIQLGTNLTRGLGAGANPDIGRAAAQEDREAIEEAIRGANML
                     FITTGMGGGTGTGSAPVVAEIAKSLGILTVAVVTRPFAYEGKRVHVAQAGLEQLKEHV
                     DSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVTCPSEIINLDFADVK
                     TVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVLVNITTAPGCLK
                     MSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKGAVDFVPARE
                     VEAVAPSKQEQSHNVEGMIRTNRGIRTMNLTAADFDNQSVLDDFEIPAILRRQHNSDK
                     "
     gene            11516..12826
                     /locus_tag="ACJJDE_000432"
     CDS             11516..12826
                     /locus_tag="ACJJDE_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HGG7540420.1"
                     /translation="MDTSKQTLLDGIFKLKANGTTVRTELMAGLTTFLTMCYIVIVNP
                     LILGETGMDMGAVFVATCIASAIGCFVMGFVGNYPIALAPGMGLNAYFTFAVVKGMGV
                     PWQVALGAVFISGLIFILFSFFKVREMLVNALPMGLKMSIAAGIGLFLALISLKGAGI
                     IVANPATLVGLGDIHQPSALLALFGFVMVVVLGHFRVQGAIIITILTITVIASLMGLN
                     EFHGIIGEVPSIAPTFMQMDFEGLFTVSMVSVIFVFFLVDLFDSTGTLVGISHRAGLL
                     VDGKLPRLKRALLADSTAIVAGAALGTSSTTPYVESAAGVSAGGRTGLTAVTVGVLML
                     ACLMFSPLAKSVPAFATAPALLYVGTQMLRSARDIDWDDMTEAAPAFLTIVFMPFTYS
                     IADGIAFGFISYAVVKLLCRRTKDVPPMVWIVAVLWALKFWYLG"
     gene            13451..14326
                     /gene="prpB"
                     /locus_tag="ACJJDE_000433"
     CDS             13451..14326
                     /gene="prpB"
                     /locus_tag="ACJJDE_000433"
                     /EC_number="4.1.3.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046421 - methylisocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylisocitrate lyase"
                     /protein_id="HGG7540421.1"
                     /translation="MSQHSAGARFRQAVKESNPLAVAGCVNAYFARLATQSGFKAIYL
                     SGGGVAACSCGIPDLGITTMEDVLIDARRITDNVDTPLLVDIDVGWGGAFNIARTIRN
                     FERAGVAAVHIEDQVAQKRCGHRPNKAIVSKDEMVDRIKAAVDARVDENFVIMARTDA
                     LAVEGLDAAIERAQACVEAGADMIFPEAMTDLNMYRQFADAVKVPVLANITEFGSTPL
                     YTQSELAENGVSLVLYPLSSFRAASKAALNVYEAIMRDGTQAAVVDSMQTRAELYEHL
                     NYHAFEQKLDKLFQK"
     gene            14411..15565
                     /gene="prpC"
                     /locus_tag="ACJJDE_000434"
     CDS             14411..15565
                     /gene="prpC"
                     /locus_tag="ACJJDE_000434"
                     /EC_number="2.3.3.16"
                     /EC_number="2.3.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050440 - 2-methylcitrate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylcitrate synthase"
                     /protein_id="HGG7540422.1"
                     /translation="MTETTQTPTFKPKKSVALSGVAAGNTALCTVGRTGNDLSYRGYD
                     ILDLAQKCEFEEVAHLLIHGHLPNKFELAAYKAKLKSMRGLPIRVIKVLESLPAHTHP
                     MDVMRTGVSMLGCVHPERESHPESEARDIADKLIASLGSILLYWYQYSHNGKRIEVES
                     DEETIGGHFLQLLHGKRPSESHIKAMHVSLILYAEHEFNASTFTARVIAGTGSDMYSS
                     ITGAIGALKGPKHGGANEVAYDIQKRYRNADEAEADIRERIGRKEIVIGFGHPVYTIS
                     DPRNVVIKEVARGLSKETGDMRLFDIAERLESVMWEEKKMFPNLDWFSAVSYQKLGVP
                     TAMFTPLFVISRTTGWSAHVLEQRKDGKIIRPSANYTGPEDLAFVEIEDR"
     gene            15977..16699
                     /locus_tag="ACJJDE_000435"
     CDS             15977..16699
                     /locus_tag="ACJJDE_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HGG7540423.1"
                     /translation="MDKDKGSYAGIPVQNTKELVWQKIQEIPISECGEPLVSVGNTGR
                     IRVNPVYFSQGIEGAINTVLLRRSVADRLTQVVSLLPEMYGLEIFDGWRPVIVQRALR
                     ENMKQEIEKRHPEYDEVQVREALDCFAADPDRAGMPLPHLTGGSVDVGLFDIKSGKSL
                     DMGSEFDATGHLSYSDALEKEGEYFSSARNLRRILIHAMKEAGFSNLPTEWWHFDYGN
                     QNWAYFTQQSNAVFGAVEEQDT"
     gene            16725..17930
                     /locus_tag="ACJJDE_000436"
     CDS             16725..17930
                     /locus_tag="ACJJDE_000436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF819 family protein"
                     /protein_id="HGG7540424.1"
                     /translation="MQTLISADNHLLLWAFVMLAAAAAIFIEQNSRLAGKVPGAVLAL
                     LIALIASNLGVIPTDAPVFDAVWSYIVPLAIPLLLFQLDLHALFKESGRMLFIFLISS
                     LGTVIGTLVSFALLKNYIPELDKVAGMISASYTGGGVNFAAMSAKLNPAKDVIAATIV
                     ADNLMMACYFFILIGISSSYWVRKVWGSPYQDKLEQEYHDPSVNKAAEYWKPKSISLQ
                     SIALSLAASILLVAVSFSLSSFLQNHFQSVDGVALKMLTGLISDKYLLLTTFTLAVVL
                     FFRKGIQKLDGSQELGTYCIYLFFVVIGVPASIPLIIKTAPLLFVFTLIIAVLNLLLT
                     LVLGKLFKFSIEEIVLACNANIGGPTTAAALAISKGWRDLVGAILLIGTVGYIIGNYI
                     GSFVYALLS"
     gene            18034..20640
                     /gene="acnD"
                     /locus_tag="ACJJDE_000437"
     CDS             18034..20640
                     /gene="acnD"
                     /locus_tag="ACJJDE_000437"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047456 - 2-methylisocitrate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0019679 - propionate metabolic process,
                     methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe/S-dependent 2-methylisocitrate dehydratase
                     AcnD"
                     /protein_id="HGG7540425.1"
                     /translation="MAANQRYRKPLPGTDLEYYDARAACEDIKPGSYDKLPYTSRILA
                     ENLVNRADKVDLPTLQSWLGQLIEGKQEIDFPWYPARVVCHDILGQTALVDLAGLRDA
                     IAEKGGDPAKVNPVVQTQLIVDHSLAVECGGYDPDAFRKNREIEDRRNEDRFHFINWT
                     KTAFENVDVIPAGNGIMHQINLEKMSPVVQVKNGVAFPDTCVGTDSHTPHVDALGVIS
                     VGVGGLEAETVMLGRASMMRLPDIVGVELTGKRQPGITATDIVLALTEFLRKERVVGA
                     FVEFFGEGARSLSIGDRATISNMTPEFGATAAMFAIDEQTIDYLKLTGRDDAQVKLVE
                     TYAKTAGLWADALKTAVYPRVLKFDLSSVTRNMAGPSNPHARFATADLAGKGLAKPYE
                     EPSDGQMPDGAVIIAAITSCTNTSNPRNVVAAALLARNANRLGLQRKPWVKSSFAPGS
                     KVAEIYLKEAGLLPEMEKLGFGIVAFACTTCNGMSGALDPKIQKEIIDRDLYATAVLS
                     GNRNFDGRIHPYAKQAFLASPPLVVAYALAGSIRFDIENDVLGVADGKEIRLKDIWPA
                     DEEIDAVVAEYVKPQQFRDVYVPMFDTGTAQKAPSPLYDWRPMSTYIRRPPYWEGALA
                     GERTLRGMRPLAILPDNITTDHLSPSNAILAVSAAGEYLAKMGLPEEDFNSYATHRGD
                     HLTAQRATFANPKLFNEMVKNEDGSVRQGSFARVEPEGETMRMWEAIETYMNRKQPLI
                     IIAGADYGQGSSRDWAAKGVRLAGVEAIVAEGFERIHRTNLIGMGVLPLQFKPGTNRH
                     TLQLDGTETYDVVGERTPRCDLTLVIHRKNGETVEVPVTCRLDTAEEVLVYEAGGVLQ
                     RFAQDFLEGVVA"
     gene            20727..21173
                     /locus_tag="ACJJDE_000438"
     CDS             20727..21173
                     /locus_tag="ACJJDE_000438"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540426.1"
                     /translation="MKTQEDEVTKQKIFNHMINNKSFLNFQFWTFAALSAGSFAFLIS
                     AANIDSKDRDLTLEIAIVGYSVSLILNSILCFLIRGIEDDELSVKMLNEFNLDKRTFW
                     IPILATWSFALSTLFLLFTISLVGAITALIMAVLAIISFIKFTKKS"
     gene            21337..22506
                     /gene="prpF"
                     /locus_tag="ACJJDE_000439"
     CDS             21337..22506
                     /gene="prpF"
                     /locus_tag="ACJJDE_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0019629 - propionate catabolic process,
                     2-methylcitrate cycle [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-methylaconitate cis-trans isomerase PrpF"
                     /protein_id="HGG7540427.1"
                     /translation="MPQIKIPAVYYRGGTSKGIFFKRTDLPEAAQQAGEARDKILLRV
                     LGSPDPYGKQIDGLGNASSSTSKAVILDKSERADHDVDYLFGQVSIDKPFVDWSGNCG
                     NLTAAVGAFSIEQGLVDKGKIPSDGICTVKIWQKNIGKTIIAHVPMQNGAVLETGDFE
                     LDGVTFPAAEVQIEFLDPADGEGSMFPTGNLVDEIDVPNIGRLKATLINAGIPTVFLN
                     AADLGYTGKELQDDINNDAAALEKFEKIRAYGALKMGLISDVSEAAARAHTPKVAFVA
                     PAADYTASSGKTVNAADIDLLVRALSMGKLHHAMMGTASVAIATAAAVPGTLVNLAAG
                     GGTRKEVRFGHPSGTLRVGAAAECQDGQWTATKAVMSRSARVMMEGWVRVPEDCF"
     gene            22920..24119
                     /locus_tag="ACJJDE_000440"
     CDS             22920..24119
                     /locus_tag="ACJJDE_000440"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7540428.1"
                     /translation="MSDQLILVLNCGSSSLKGAVIDRKSGSVVLSCLGERLTTPEAVI
                     TFSKDGNKRQVPLSGRNCHAGAVGMLLNELEKHGLHDRIKAVGHRIAHGGEKYSESVL
                     IDQAVMDELNACIPLAPLHNPANISGILAAQEHFPGLPNVGVMDTSFHQTMPERAYTY
                     AVPRELRKKYAFRRYGFHGTSMRYVAPEAARILGKPLEDIRMIIAHLGNGASITAIKN
                     GKSVDTSMGFTPIEGLVMGTRCGDIDPGVYSYLTSHAGMDVAQVDEMLNKKSGLLGIS
                     ELSNDCRTLEIAADEGHEGARLALEVMTYRLAKYIASMAVGCGGVDALVFTGGIGENS
                     RNIRAKTVSYLDFLGLHIDTKANMEKRYGNSGIISPTDSSPAVLVVPTNEELMIACDT
                     AELAGIL"
     gene            24227..24847
                     /locus_tag="ACJJDE_000441"
     CDS             24227..24847
                     /locus_tag="ACJJDE_000441"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7540429.1"
                     /translation="MAQFFAVHPDNPQERLIKQAVEIVNKGGVVVYPTDSCYALGCKL
                     GDKAAMERILSIRKIDLKHHLTLMCADLSELGTYAKVDNVQFRQLKAATPGPYTFILQ
                     ATKDVPARTLHPKRKTIGLRIPDNAIAQALLGELGEPLLSCTLMLPEDGEPLTDPYEI
                     RERLEHAVDLVIDGGWCGTEPTTVVDMTDGTELVRQGCGDTAVFGL"
     gene            complement(24974..25417)
                     /locus_tag="ACJJDE_000442"
     CDS             complement(24974..25417)
                     /locus_tag="ACJJDE_000442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HGG7540430.1"
                     /translation="MYLTQHTDYGLRVLIYTAINDDALVNISTIAVTYGISKSHLMKV
                     VTALVKGGFLHSVRGKGGGLRLAAPPDRINIGSVVRHLEPMQLVECMGENNECLITPS
                     CRLTGILGGAMKSFFTYLDGFTLQDLLNKPTYDLLYEPRIPIAVQ"
     gene            25591..25959
                     /locus_tag="ACJJDE_000443"
     CDS             25591..25959
                     /locus_tag="ACJJDE_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7540431.1"
                     /translation="MKPLKRHPALIGLSRDHHHSLSLCVRLLRTPEERHRDELEPHFS
                     ELETHFREEEAKFAPIWQNVAPELKQRFEKDHARLRQMMASPEYGNAAWNTAFATTLR
                     DHARFEERELFPAAEPFLPA"
     gene            26004..27158
                     /locus_tag="ACJJDE_000444"
     CDS             26004..27158
                     /locus_tag="ACJJDE_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrS family protein"
                     /protein_id="HGG7540432.1"
                     /translation="MKFTKHPVWAMAFRPFYSLAALYGALSVLLWGFGYTGTHELSGF
                     YWHAHEMIWGYAGLVVVAFLLTAVATWTGQPPTRGGVLVGLTIFWLAARIAAFIPGWG
                     ASASGILGTLFFWYGAVCMALPVIRSQNQRNYVAVFALFVLGGTHAAFHVQLHNGNLG
                     GLLSGLQSGLVMVSGFIGLIGTRIISFFTSKRLNVPQIPSPKWVAQASLWLPMLTAML
                     MAHGVMPWLSAAFAFAAGVIFTVQVYRWWYKPVLKEPMLWILFAGYLFTGLGLIAVGA
                     SYFKPAFLNLGVHLIGVGGIGVLTLGMMARTALGHTGNPIYPPPKAVPVAFWLMMAAT
                     AVRMVAVFSSGTAYTHSIRTSSVLFALALLVYAWKYIPWLIRPRSDGRPG"
     gene            complement(27215..28087)
                     /locus_tag="ACJJDE_000445"
     CDS             complement(27215..28087)
                     /locus_tag="ACJJDE_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HGG7540433.1"
                     /translation="MPILNHIALIGVGLIGGSFVLDLKRQGLVRTVTGIDTDRDNLER
                     ALERGVIDRASVAIDADSIGGADLVLIATPVATFPAILTALRPVLPEHTWISDVGSTK
                     SSVIEAFRRCLPDRLHRCIAAHPIAGSDRSGAQAAQFGLFRHRKLIITPHGGEHSDGI
                     ALVEELWHAVGAEIYTMDAQRHDAVFAAVSHMPHLTAFAYVHQILDHPDGQEYLKFAA
                     TGFRDFTRIASGHPAVWADICLANKDSLLQLVQGLGKQLDVLANILTTDDREALYRYF
                     EEAKTTRDRWLDGN"
     gene            28172..28984
                     /locus_tag="ACJJDE_000446"
     CDS             28172..28984
                     /locus_tag="ACJJDE_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HGG7540434.1"
                     /translation="MDKIRVAAVQMVSGVSPETNVAAMKRLVARAAEQGVDWVLLPEY
                     WVLMGANDTDKLALAEPLGGGRFQTALSETAKECGVVLFGGTVPLQSPEAGKVMNTLL
                     VYGRDGKRTGLYHKMHLFGFSGLGERYAEADTIRAGGEVPHLSAEGVPVAAGICYDVR
                     FPEFFRRQLPFDVLMLPAAFTHTTGKAHWELLLRARAVENQCYVVAAAQGGLHENGRR
                     TFGHSMIVDPWGDVLDVLPEGEGVVTADIDANRLNSVRNRLPALKHWVLDAV"
BASE COUNT         6822 a         7355 c         8014 g         7046 t
ORIGIN      
        1 gacaaaacaa aaaaaggaag ccccatgttt ttatggctcg cacatttcag caactggtta
       61 accggtctga atatttttca atacaccaca ttccgcgccg tcatggcggc gttgaccgcc
      121 ttggcgtttt ccctgatgtt cggcccgtgg acgatacgca ggctgaccgc gctcaaatgc
      181 gggcaggcag tgcgtaccga cggcccgcaa acccacctcg tcaaaaacgg cacgccgacg
      241 atgggcggtt cgctgattct gaccgccatt accgtgtcca ccctgttgtg gggcaactgg
      301 gcgaacccgt atatctggat tctcttgggc gtattgctcg ctaccggcgc actcggtttt
      361 tacgacgact ggcgcaaagt cgtctataaa gaccccaacg gcgtgtccgc caaattcaaa
      421 atggtgtggc agtcaagcgt tgccattatc gccggtttgg cattgtttta ccttgccgcc
      481 aattccgcca acaatatttt gattgtcccg ttcttcaaac aaatcgccct gccgctgggc
      541 gtggccggct ttttggtgtt gtcttacctg accatcgtcg gcacatccaa cgccgtcaat
      601 ctcaccgacg gcttggacgg ccttgccgcc ttccccgtcg tcctcgttgc cgccggactc
      661 gccattttcg cctacgtcag cggacactac caattttccc aatacctgca attaccttac
      721 gttgccggcg caaacgaagt ggtgattttc tgtaccgcca tgtgcggcgc gtgcctcggt
      781 ttcttgtggt ttaacgccta tcccgcgcaa gtctttatgg gcgatgtcgg tgcattggca
      841 ttgggtgccg cgctcggtac cgtcgccgtc atcgtccgcc aagagtttgt cctcgtcatt
      901 atgggcggat tatttgtcgt agaagccgta tccgttatgc ttcaggttgg ctggtataag
      961 aaaaccaaaa aacgcatctt cctgatggcg cccatccatc accactacga acaaaaaggc
     1021 tggaaagaaa cccaagtcgt cgtccgcttt tggattatta ccatcgtctt ggtgttgatc
     1081 ggtttgagta ccctcaaaat ccgctgaacc tatgccgtct gaacaccttt cagacggcat
     1141 ttgaacgcgc aataaacctg cggcgacaat ccgcccagcc ctatcgttaa cggcggctta
     1201 tactaaaaca gaagtaaaac catgaaacag acagtcaaat ggcttgccgc cgccctgatt
     1261 gccttgggct tgaaccaagc ggtgtgggcg gatgacgtat cggattttcg ggaaaacttg
     1321 caggcggcag cacagggaaa tgcagcagcc caatacaatt tgggcgcaat gtattacaaa
     1381 ggacgcggcg tgcgccaaga ccttgtgctc gctcaagaat ggtttggtaa ggcttgtcaa
     1441 aacggagacc aagacggctg cgacatttac caacgcctga aggcaggtta ttgaacagcc
     1501 cgcgatgccg tctgaaagcg gcttgggcag gggcggacat ccccccacct gcccaatatg
     1561 atttgtttta ggacaaaacc aaaatgacgc ttgaaaacaa aaaaatcctc gtcgccggac
     1621 tcggcggtac gggtatttcc atgattgcct atctgcgcaa aaacggcgcg gaggtggccg
     1681 cttatgatgc ggagttgaag cccgagcgcg tgtcgcaaat cggtaagatg tttgacgggc
     1741 tggtgtttta cacaggccgt ctgaaagatg cgctggacaa cggtttcgat attttggcac
     1801 tcagccccgg catcagcgag cgtcagccgg atattgaggc gttcaagcaa aacggcggac
     1861 gcgtgttggg cgacatcgaa ttgctggcgg acattgtgaa ccgccggggc gacaaggtaa
     1921 ttgcgattac cggcagcaac ggcaaaacca cggtaacgag cctggtcggc tatctctgta
     1981 tcaagtgcgg gctggatacc gttatcgcgg gcaatatcgg cacgccggtt ttggaggcgg
     2041 aatggcagcg cgaaggcaaa aaggcggacg tgtgggtgtt ggagctttcc agcttccaac
     2101 tggaaaacac cgaaagcctg cgcccgacgg cggcgacggt actgaatatt tccgaagacc
     2161 atctcgaccg ctacgacgac ttgctcgact acgcgcatac caaagccaag attttccgtg
     2221 gcgacggtgt gcaggttttg aatgcggacg atgcgttctg ccgtgccatg aaacgtgccg
     2281 ggcgcgaggt aaaatggttt tcgttggaac acgaagccga tttttggttg gaacgtgaga
     2341 caggccgcct gaaacaaggc aatgaagatt tgattgccac gcaagatatt ccgttgcaag
     2401 gcttgcacaa cgccaccaac gtgatggctg ccgttgcctt gtgcgaagct gtcggtttgc
     2461 cgcgcgaagc attgctcgaa cacgtcaaaa cctttcaagg cctgccgcac cgcgtggaaa
     2521 aaatcggcga gaaaaatggc gtggtgttta tcgatgacag caaaggcacg aacgtcggtg
     2581 cgaccgccgc cgcgattgcc ggtttgcaaa atccgctctt cgtgatttta ggcggcatgg
     2641 gcaaagggca ggacttcacg cctctgcgcg acgcgcttgc cggcaaggca aaaggcgtgt
     2701 tcctgatcgg cgttgatgcg ccgcaaatcc gccgcgattt ggacggctgc ggtctgaata
     2761 tgaccgactg cgccactttg gaagaagccg ttcagacggc atatgcccaa gccgaagcgt
     2821 gcgatatcgt gctgctcagc ccggcttgtg cgagttttga tatgtttaaa ggctacgcgc
     2881 accgttcgga agtgtttatc gaagcgttta aggctttgtg atgccgtctg aaatgcaaac
     2941 gccgtcattg ttgggcggca agtaaagatt tagaataccg atttgggatg tatcgtatgt
     3001 tcggacggca ttgtctgccg tctgaaattt ttgccctttg cggcaggtgc aaacagaatg
     3061 acaggtggtt ttttgaagat ttcggaagta ttggtaaaag tgggcgacgg tgtccacact
     3121 ctgctgctcg acaggcagat tgtgcgcgac ggcaggaaat tcgacgcgcc gcttttgtgg
     3181 atggtggtgc tgatgacggc gttcagcctg ctgatgattt attcggcttc tgtgtatttg
     3241 gcatcaaaag aaggcggcga tcagtttttc tatttgacca gacaggcggg gttcgtcgtt
     3301 gccggcttga tagcgagcgg ttttttatgg tttctttgca ggatgaggac atggcggcgg
     3361 cttgtgccgt ggatttttgc cttatccggc ctgttgctgg tagtcgtatt gattgccggg
     3421 cgcgaaatca atggcgcgac ccgttggata cctttgggtc cgttgaattt ccagccgacc
     3481 gagctgttca agctggcggt catcctttat ttggcaagcc tgttcacgcg ccgtgaagaa
     3541 gtgttgcgca gcatggaaag tttgggttgg cagtcgattt ggcgggggac ggccaatctg
     3601 atcatgtccg ccaccaatcc gcaggcacgt cgtgaaacat tagaaatgta cggccgtttc
     3661 cgggcgatca tcctgccgat tatgctggtg gcgttcggtt tggtgctgat aatggtacag
     3721 ccggatttcg gttcgtttgt cgtcattacc gtcattgccg ttggaatgct gtttttggca
     3781 ggattgccgt ggaaatattt tttcgtcctg gtaggcagcg tcttgggcgg gatggtgctg
     3841 atgattaccg ccgctcccta ccgtgtgcag cgggtagtgg catttttgga cccgtggaaa
     3901 gacccgcagg gtgccggcta ccagcttacc cactctctga tggcaatcgg gcgcggagag
     3961 tggttcggta tgggtttggg tgcgagtttg agcaaacgcg gctttctgcc ggaagcgcat
     4021 accgatttta tttttgccat catcgccgaa gaattcggtt tcttcggtat gtgcgtgctg
     4081 atattctgtt acggctggct ggtggtgcgg gcgttttcca tcggcaagca gtcgcgcgat
     4141 ttgggtttga ctttcaacgc ctatatcgct tcgggtatcg gcatttggat cggtatccaa
     4201 agtttcttca atatcggtgt gaacatcggt gctttgccga ccaaaggtct gacgctgccg
     4261 ttgatgtcct atggcggttc gtcagtcttt ttcatgctga tcagcatgat gctgctgttg
     4321 cgtatagatt atgaaaaccg ccggaaaatg cgcggttatc gggtggagta aatcatgggc
     4381 ggtaaaacct ttatgctgat ggcgggcgga acgggcggac atattttccc cgcgctggcg
     4441 gtggcggatt cattgcgcgc gcgcggccat catgtgattt ggctgggcag caaggattcg
     4501 atggaagagc gtatcgtgcc gcaatacggc atacgcttgg aaacgctggc gattaaaggc
     4561 gtgcgcggca acggcatcaa acgcaagctg atgctgccgt ttactttgta tcaaaccgtc
     4621 cgcgaagcgc agcggattat ccgcaaacac cgtgtcgagt gcgtcatcgg cttcggcggc
     4681 ttcgttacct tccccggcgg tttggcggcg aagctattag gcgtgccgat tgtgattcac
     4741 gagcaaaacg ccgtggcagg tttgtccaac cgccacctgt cgcgctgggc gaagcgggtg
     4801 ttgtacgctt ttccgaaagc gttcagccac gaaggcggct tggtcggcaa ccccgtccgc
     4861 gccgatatta gcaacctgcc cgcgcctgcc gaacgcttcc aagggcgtaa aggccgtctg
     4921 aaaattttgg tggtcggcgg cagtttgggc gcggacgttt tgaacaaaac cgtaccgcag
     4981 gcattggctt tgctgcccga caatgcgcgt ccgcagatgt accaccaatc gggacggggc
     5041 aagctgggca gcttgcaggc ggattacgac gcgctgggcg tgaaagccga atgcgtggaa
     5101 tttattaccg atatggtgtc cgcctaccgc gatgccgatt tggtgatttg ccgtgccggc
     5161 gcgctgacga ttgccgagtt gacggcggcg ggattgggtg cgttgttagt gccgtatcct
     5221 cacgccgttg atgaccatca aaccgccaac gcgcgtttta tggtgcaggc agaagcagga
     5281 ctgctgttgc cgcaaaccca gttgacggcg gaaaaactcg ccgaaatcct cggcagcctg
     5341 aaccgcgaaa aatgtctcaa atgggcggaa aacgcccgta ctttggcatt gccgcacagc
     5401 gcggacgacg ttgccgaagc cgcgattgcg tgtgcggcgt aaactgccga accatgccgt
     5461 ctgaaatgcc gtccagacag catggatgtt ttttatttca atccgctata tatttgtcag
     5521 aaaactatgg cgcgcaaacg gtcagccctt taaaataacg cctttacgca tcgaaaatcc
     5581 accggaacgc aacattatga tgaaaaatcg agtgaccaac atccattttg tcggtatcgg
     5641 cggcgtcggc atgagcggca tcgccgaagt cttgcacaat ttgggtttta aagtttccgg
     5701 ttcggatcag gcgcgtaatg ccgctaccga gcatttgggc agcctgggca ttcaagttta
     5761 tcccggccat accgcagaac acgttaacgg tgcggatgtc gtcgttacct ctaccgccgt
     5821 caaaaaagaa aatcccgaag ttgtcgctgc gttggagcag caaattcccg ttattccgcg
     5881 cgccctgatg ttggcggagt tgatgcgctt ccgtgacggc atcgccattg ccggcacgca
     5941 cggcaaaacc acgaccacca gcctgaccgc ctccatcctc ggcgcggcag gacttgaccc
     6001 gactttcgtt atcggcggca aactcaacgc cgcaggcacc aacgcccgct tgggcaaagg
     6061 cgaatacatc gttgccgaag ccgacgagtc ggatgcatcc tttctgcacc tgacaccgat
     6121 tatgtccgtc gttaccaata tcgacgaaga ccatatggat acctacgggc acagcgtcga
     6181 aaaactgcat caggcgttta tcgatttcat ccaccgtatg cccttctacg gcaaagcctt
     6241 tttgtgtatt gacagcgaac acgtccgcgc gattttgccc aaagtgagca aaccttatgc
     6301 tacttacggt ttggacgata ccgccgacat ctacgccacc gacatcgaaa acgtcggcgc
     6361 gcaaatgaaa ttcaccgtcc atgttcaaat gaaaggacat gagcaggggt cgtttgaagt
     6421 cgtgctgaat atgcccggca gacacaacgt gctgaacgca ttggcagcca tcggcgtggc
     6481 gctggaagtc ggcgcatcgg ttgaagcgat ccaaaaaggc ttgctcggct ttgaaggtgt
     6541 cggccgccgc ttccaaaaat acggcgacat caagttgcca aacggcggga ccgcgctctt
     6601 ggtggacgac tacggacacc accccgtcga aatggcggcg acccttgccg ccgcacgcgg
     6661 cgcgtatccg gaaaaacgtt tggtactcgc cttccagccg caccgctata cccgcacgcg
     6721 cgatttgttt gaagacttta ccaaagtcct caataccgtt gacgcgctgg tgctgaccga
     6781 agtttatgcc gccggtgaag agccgattgc cgccgccgat tcccgcgctc ttgcccgcgc
     6841 catccgcgtg ttgggcaaac tcgagccgat ttactgcgaa aacgttgccg atctgcccga
     6901 aatgctgttg aacgttttgc aggacggcga catcgtgttg aatatgggtg cgggaagcat
     6961 caaccgcgtc cccgccgcgc tgctggaatt gtcgaaacag atttgaggca cacccgcctg
     7021 acagacggaa catcatataa aggtcgtctg aaaccgcaaa tcaggtttca gacgacctct
     7081 ggcaacaagc ataaagcaat caggaaagaa caaaaacaat gcagaatttt ggcaaagtgg
     7141 ccgtattgat gggcggtttt tccagcgaac gagaaatctc gctggacagc ggcaccgcca
     7201 ttttgaatgc tttaaaaagc aaaggcatag acgcatatgc cttcgatcct aaagaaaccc
     7261 cattgtctga attgaaggca caaggttttc agacggcatt caacatcctt cacggtactt
     7321 acggcgaaga cggggcggtt cagggtgcat tggaactgtt gggcattccc tataccggca
     7381 gcggtgtcgc cgcatccgcc atcggcatgg acaaataccg ctgcaaactg atttggcagg
     7441 cattgggact gcccgttccc gagttcgccg tcctgcacga cgacactgat ttcgatgccg
     7501 tcgaagaaaa attgggcctg ccgatgtttg tgaaaccggc ggccgaaggc agcagcgtag
     7561 gcgtggtaaa agtcaaagga aaaggccgtc tgaaaagcgt ttacgaagaa ttgaaacacc
     7621 ttcagggcga aatcattgcc gaacgtttta tcggcggcgg cgaatattcc tgccccgtcc
     7681 tgaacggcaa agggctgccc ggcatacaca tcattcccgc aaccgagttt tacgactacg
     7741 aagccaagta caaccgcgac gacaccattt atcaatgtcc ttcggaagat ttgaccgaag
     7801 ccgaagaaag cctgatgcgc gaactggcgg ttcgcggcgc gcaggcaatc ggtgcggaag
     7861 gctgcgtgcg cgtcgatttc ctcaaagata ccgacggcaa actctatctg ttggaaatca
     7921 acaccctgcc cggtatgacg agccatagtt tagtaccgaa atccgctgcc gttacgggcg
     7981 tgggttttgc cgatttatgt attgaaattt tgaagaccgc acatgtggga taatgccgaa
     8041 gcgatggaac ggctgacgcg ctggctgctt gtcatgatgg cgatgctgct tgctgcgtcc
     8101 gggctggttt ggttttacaa ttcgaatcat ctgcccgtca agcaggtgtc gctgaagggc
     8161 aacctggttt attccgataa gaaggcattg ggcagtttgg cgaaagaata catccatggg
     8221 aatattttga ggacggacat caatggcgca caggaggcct accgccggta tccgtggatt
     8281 gcgtcggtca tggtgcgccg ccgttttccc gacacggttg aggtcgtcct gaccgagcgc
     8341 aagccggtcg cgcgttgggg cgaccatgcc ttggtggacg gcgaaggcaa tgtttttgaa
     8401 gcccgcttgg acagacccgg aatgccggta ttcagaggcg cggaaggaac gtctgccgaa
     8461 atgctccgcc gttatgacga attttcgact gttttggcaa aacagggttt gggcatcaaa
     8521 gagatgacct atacggcacg ttcggcgtgg attgtcgttt tggacaacgg catcaccgtc
     8581 aggctcggac gggaaaacga gatgaaacgc ctccggcttt ttaccgaagc gtggcagcat
     8641 ctgttgcgta aaaataaaaa tcggttatcc tatgtggata tgaggtataa ggacggattt
     8701 tcagtccgct atgcttccga cggtttaccc gaaaaagaat ccgaagaata gtgggaacag
     8761 gtatcggaca gattacggcc gtgccgtctg aaacggtgcg acgcaaattt caatcagttt
     8821 taagagcaga cgaacaatgg aacagcagca aagatacatc agcgtactgg atatcggtac
     8881 gtctaaagtc ctcgcactga tcggggaagt tcaagatgac gacaaaatca acatcgtcgg
     8941 tttggggcag gctccttcac ggggcttgcg cgcgggcatg gtaaccaata tcgatgccac
     9001 cgtccaagcc atcaggcagg cggtcaatga tgccgagctg atggcggata ccaaaattac
     9061 ccacgttacc acaggtatcg caggcaacca catccgcagt ctcaattcgc aaggtgtggt
     9121 taaaattaaa gacggggaag tcacgcaggc agacatcgac cgcgccattg aaacggcaaa
     9181 ggcaatcaat atcccgcccg atcaaaaaat tctcgatgcc gtggttcaag actacattat
     9241 cgacacccaa cttggcgtga gggagcccat cggtatgagc ggtgtgcgtc tggatacgcg
     9301 ggtgcacatc attaccggtg caagtacggc agtgcagaat gtccaaaaat gtatcgagcg
     9361 gtgcggtttg aaaagcgatc agattatgct tcagccgttg gcaagcgggc aggcggtgct
     9421 gactgaagat gaaaaagacc tcggtgtatg cgtcatcgac attggtggcg gaacgaccga
     9481 tattgccgtt tatatgaacg gcgccatccg ccatacgtcc gtcattccgg ccggtggtaa
     9541 tctgattacc aaagatttgt ccaaatcgtt gagaacacct ctcgatgccg ccgagtacat
     9601 taaaatccat tatggcgtgg catcatgcga tacggaaggc ttgggtgaga tgattgaagt
     9661 tccgggcgtg ggtgaccgga catcgcgtca ggtttccagt aaggttttgg cagcaatcat
     9721 cagtgcacgt attcaggaga tttttggcgt agtgctgggc gagctgcaaa aatcgggttt
     9781 ccccaaagaa gtgctgaatg cgggtatcgt tctgaccggc ggtgtgtcca tgatgaccgg
     9841 gattgtggaa tttgccgaaa aaatcttcga tttgcctgta cgcaccggtg caccccaaga
     9901 aatgggcggt ttgtccgacc gcgtccgcac accgcgtttt tctaccgcta tcgggctgct
     9961 tcatgcagca tgcaagctgg aaggaaactt gccgcagccg gaaaacggtg cagtgcaaga
    10021 gagggaaggg ggcggcggtt tgttggcaag attgcaacgg tggattgaaa acagcttctg
    10081 aacaggtgga ttgccgtttg acaggtgaga agtattttgc cagcagcaag atacttctta
    10141 tataatgaat aataatttat ttaaaccgtc ctctgaatgg ggcgagcagg agtttttgaa
    10201 tggaatttgt ttacgacgtg gcagaatcgg cagtcagccc tgcggtgatt aaagtaatcg
    10261 gcttgggcgg cggcggttgc aatgcaatca ataacatggt tgccaacaat gtgcgcggtg
    10321 tggagtttat cagtgccaat acggatgcgc agtctctggc aaaaaaccat gcggcgaaga
    10381 gaatccagtt gggtacgaat ctgacacgcg gtttgggcgc gggcgcgaat cccgatatcg
    10441 gccgtgcggc agcccaggaa gaccgggaag ccattgaaga agccattcgc ggtgcgaata
    10501 tgctgtttat cacgaccggt atgggcggcg gtaccggtac cggttccgcg ccggttgttg
    10561 ctgagattgc caagtctttg ggcattctga ccgttgccgt ggttacccga ccgttcgcat
    10621 atgaaggtaa gcgcgtccat gtcgcacagg cagggttgga acagttgaaa gaacacgtcg
    10681 attcgctgat catcatcccg aacgacaaac tgatgactgc attgggtgaa gacgtaacga
    10741 tgcgcgaagc cttccgtgcc gccgacaatg tattgcgcga tgcggtcgca ggcatttccg
    10801 aagtggtaac ttgcccgagc gaaatcatca acctcgactt tgccgacgtg aaaaccgtga
    10861 tgagcaaccg cggtatcgct atgatgggtt cgggttatgc ccaaggtatc gaccgtgcgc
    10921 gtatggcgac cgaccaggcc atttccagtc cgctgctgga cgatgtaacc ttggacggag
    10981 cgcgcggtgt gctggtcaat attacgactg ctccgggttg cttgaaaatg tccgagttgt
    11041 ccgaagtcat gaaaatcgtc aaccaaagcg cgcatcccga tttggaatgc aaattcggtg
    11101 cggctgaaga cgagaccatg agcgaagatg ccatccggat taccattatc gctaccggtc
    11161 tgaaagaaaa aggcgcggtc gattttgttc cggcaaggga ggtagaagcg gttgccccgt
    11221 ccaaacagga gcaaagccac aatgtcgaag gtatgatccg caccaatcgc ggtatccgca
    11281 cgatgaacct taccgctgcg gatttcgaca atcagtccgt acttgacgac tttgaaatcc
    11341 ctgctatttt gcgtcgtcaa cacaattcag acaaataatg tgctgtttgc ccgtaaacct
    11401 gctgcctccc gaatcggttt gtccggtttg ggaggtatgt ttttcaagat gttgcaattt
    11461 cgtacggttt gcggtcggcg gattcagatt tttccacttg atacagactt cagatatgga
    11521 cacttcaaaa caaacactgt tggacgggat ttttaagctg aaggcaaacg gtacgacggt
    11581 gcgtaccgag ttgatggcgg gtttgacaac ttttttgacg atgtgctaca tcgttatcgt
    11641 caaccctctg attttgggcg agaccggcat ggatatgggg gcggtattcg tcgctacctg
    11701 tatcgcgtct gccatcggct gttttgttat gggttttgtc ggcaactatc cgattgcact
    11761 cgcaccgggg atggggctga atgcctattt cacctttgcc gtcgttaagg gtatgggcgt
    11821 gccttggcag gttgcgttgg gtgcggtgtt catctccggt ctgattttta tcctgttcag
    11881 cttttttaaa gtcagggaaa tgctggtcaa cgcactgcct atgggtttga aaatgtcgat
    11941 tgctgccggt atcggtttgt ttttggcact gatttccctg aaaggcgcag gcattatcgt
    12001 tgccaatccg gcaaccttgg tcggcttggg cgatattcat cagcccagcg cactgttggc
    12061 attgttcggt tttgtcatgg tggtcgtatt ggggcatttc cgcgttcaag gcgcaatcat
    12121 catcaccatt ctgacgatta ccgtcattgc cagcctgatg ggtttgaatg aatttcacgg
    12181 catcatcggc gaagtaccga gcattgcgcc gacttttatg cagatggatt ttgaaggcct
    12241 gtttaccgtc agcatggtca gtgtgatttt cgtcttcttc ttggtcgatc tatttgacag
    12301 taccggaacg ctggtcggca tatcccaccg tgccgggctg ctggtggacg gtaagctgcc
    12361 ccgcctgaaa cgcgcactgc ttgcagactc taccgccatt gtggcaggtg cggctttggg
    12421 tacttcttcc accacgcctt atgtggaaag cgcggcgggc gtatcggcag gcggacggac
    12481 cggcctgacg gcggttaccg tcggcgtatt gatgctcgcc tgcctgatgt tttcaccttt
    12541 ggcgaaaagt gttcccgctt ttgccaccgc gcccgccctg ctttatgtcg gcacgcagat
    12601 gctccgcagt gcgagggata ttgattggga cgatatgacg gaagccgcac ccgcattcct
    12661 gaccattgtc ttcatgccgt ttacctattc gattgcagac ggcatcgcct tcggcttcat
    12721 cagctatgcc gtggttaaac ttttatgccg ccgcaccaaa gacgttccgc ctatggtatg
    12781 gattgttgcc gtattgtggg cactgaaatt ctggtatttg ggctgattga ttcgatatta
    12841 aaaatgccgt ctgaaaggtt ttcagacggc attttgtttg ccgatatatt taatttttat
    12901 taaattatat aaaaatcaaa tagataataa actacatcag attacttaaa aataatacat
    12961 tgtttttatg tataaaatat tttataaggt ttcaggattt tgattatcga aaatttttct
    13021 tgatttcctg acaattttat tgaaacaaat aattcaaaat taatctagtt taatcatgga
    13081 attaaaataa aatattaaaa ttatgtaatg agtctcctta aaaatgtttg acattttcag
    13141 tcttgtgttt tagattagcg aaaaataaaa ctacacaata ctacaaagga acattactat
    13201 gaaaccaatt cagatgtttt ccccttttct gaataatccc cttgttttct tcttgtctgc
    13261 ggttttgccg cataattccg aacggtctgc tgtttttctt tgattcgttt taaatatcaa
    13321 taagataatt gttctcatat atttttaatg attggattgg gatgcccgac gcgtcggatg
    13381 gctgtgtttt gccgtccgaa tgtgatggaa gcctgtccat actgaaaaaa gtctataaag
    13441 gagaaatatg atgagtcaac actctgccgg agcacgtttc cgccaagccg tgaaagaatc
    13501 gaatccgctt gccgtcgccg gttgcgtcaa tgcttatttt gcacgattgg ccacccaaag
    13561 cggtttcaaa gccatctatc tgtccggcgg cggcgtggca gcctgttctt gcggtatccc
    13621 tgatttgggc attaccacaa tggaagatgt gctgatcgac gcacgacgca ttacggacaa
    13681 cgtggatacg cctctgctgg tggacatcga tgtgggttgg ggcggtgcat tcaatattgc
    13741 ccgtaccatt cgcaactttg aacgcgccgg tgttgcagcg gttcacatcg aagatcaggt
    13801 agcgcaaaaa cgctgcggcc accgtccgaa caaagccatt gtatctaaag atgaaatggt
    13861 cgaccgtatc aaagctgccg tagatgcgcg cgttgatgag aacttcgtga ttatggcgcg
    13921 taccgatgcg ctggcggtag aaggtttgga tgccgctatc gaacgcgccc aagcttgtgt
    13981 cgaagccggt gcggacatga ttttccctga agccatgacc gatttgaaca tgtaccgcca
    14041 atttgcagat gcggtgaaag tgcccgtgtt ggcgaacatt accgagtttg gttccactcc
    14101 gctttatacc caaagcgagc tggctgaaaa cggcgtgtcg ctggtgctgt atccgctgtc
    14161 atcgttccgt gcagcaagca aagccgctct gaatgtttac gaagcgatta tgcgcgatgg
    14221 cactcaggcg gcggtggtgg acagtatgca aacccgtgcc gagctgtacg agcatctgaa
    14281 ctatcatgcc ttcgagcaaa aactggataa attgtttcaa aaatgattta ccgctttcag
    14341 acggccttcc aatctatccg catcggccgt ctgaaaattg aaaatccata aaaaacaaag
    14401 gagaaatacg atgactgaaa ctactcaaac cccgactttc aaacctaaaa aatccgttgc
    14461 gctttccggc gttgcggcgg gtaatacagc attgtgtacc gtcggccgta ccggcaacga
    14521 tttgagctat cgcggttacg acatcttgga tttggcacaa aaatgcgagt ttgaagaagt
    14581 cgcccacctg ctgattcacg gtcatttgcc caacaaattc gagctggccg cttataaagc
    14641 caagctcaaa tccatgcgcg gcctgcctat ccgtgtgatt aaagttttgg aaagcctacc
    14701 tgcacatacc catccgatgg atgtgatgcg taccggcgta tccatgctgg gctgcgttca
    14761 tcctgaacgt gaaagccatc cggaaagcga agcgcgcgac atcgccgaca aactgatcgc
    14821 cagcctcggc agcatcctct tgtactggta tcaatattcg cacaacggca aacgcattga
    14881 ggttgaaagc gacgaagaga ccatcggcgg tcatttcctg caactgttgc acggcaaacg
    14941 cccaagcgaa tcccacatca aagccatgca cgtttcactg attctgtatg ccgaacacga
    15001 gttcaacgct tctaccttca ccgcccgcgt gattgccggt acaggctctg atatgtactc
    15061 cagcattacc ggagcaatcg gcgcgttgaa aggtccgaaa cacggcggcg cgaacgaagt
    15121 ggcttacgat attcaaaaac gctaccgcaa tgccgacgaa gccgaagccg acatccgcga
    15181 acgcatcggc cgcaaagaaa tcgtgatcgg tttcggtcat ccggtgtaca ccatctccga
    15241 ccctcgcaac gttgtcatta aagaagtggc acgcggtttg agcaaagaaa ccggcgatat
    15301 gcgcctcttt gacattgccg aacgtttgga aagcgtgatg tgggaagaga aaaaaatgtt
    15361 cccgaatctg gactggttct ccgccgtttc ctatcaaaaa ttgggcgtac cgaccgctat
    15421 gttcacaccg ctgttcgtga tttctcgtac aaccggttgg agcgcacacg ttctcgagca
    15481 acgcaaagac ggcaaaatca tccgtccgag cgcgaactac acgggccctg aagatttggc
    15541 gtttgtggag attgaagacc gctaatacgc gtaacagcag ggtgggccgc cagcccgccc
    15601 catctcgaaa tgccgtttga aaacaatgaa taaatgatgt tttcgttttt cgatggccta
    15661 gtgcagtatg cgagagagag ccggccgttt ggaaaacatg ctgctctgct gtcgtcattc
    15721 ccatacaggc agaaattcaa aagttgaaat gttctgctgt aaagagtgct gaaagattta
    15781 agtttggatt tccgtctata cgggaatgat ggtagcggag cagcaatttt tttcataccg
    15841 cgaatagatt tcagataaca agcaataaaa cagaatttat ggtttcagac ggcctgaagg
    15901 tccgaatcaa caggccgtct gaaaaaagaa atttaatgaa tttattggca tactaattat
    15961 taatgcggaa catttgatgg ataaggacaa ggggtcttat gctggtattc ccgtacaaaa
    16021 taccaaagag ttagtttggc agaaaataca agaaatacct atttctgaat gtggggaacc
    16081 gttggtcagt gttggtaata ccggacgcat tcgtgtcaat cctgtttatt tttcccaggg
    16141 tattgaaggt gcaataaata ctgttttatt gcgtagaagt gttgctgata ggctgactca
    16201 ggttgtctct ttgctgccag aaatgtacgg attggaaatt tttgatggtt ggcgtcctgt
    16261 catagtgcaa agagcattac gagaaaatat gaagcaagaa attgaaaaac gccatccgga
    16321 atatgatgaa gttcaagtta gagaagcact ggactgtttt gctgctgatc cagatcgggc
    16381 aggaatgcct ctgccccatt tgacaggcgg atctgttgat gtcggattgt ttgatataaa
    16441 aagtggcaaa agtttggata tgggaagtga gtttgatgca accggacatt tatcttatag
    16501 cgatgcttta gagaaagaag gtgagtattt ctcctctgct cgtaatttac gccggatttt
    16561 gattcatgcg atgaaagagg caggatttag taatttgcca accgaatggt ggcatttcga
    16621 ttatggcaac caaaattggg cttattttac ccaacaaagc aacgcagttt ttggggcggt
    16681 agaagagcag gatacttaaa ttaaaataaa aattgggagg aaaaatgcaa actttaattt
    16741 cagcagataa tcatttgctg ctgtgggctt ttgttatgtt agctgccgct gctgcgattt
    16801 ttattgagca aaacagtcgc ttggctggga aagtccctgg tgcagtatta gctttattga
    16861 ttgcgttgat tgcttctaat ttgggtgtta ttccgacgga tgctccagta tttgatgctg
    16921 tatggtctta tattgtacct cttgctattc cgttgttatt gtttcaatta gatcttcatg
    16981 ctctatttaa ggaaagtgga cgtatgctgt ttattttcct gattagttca ctagggacgg
    17041 tcattggaac gcttgtctca tttgcactat tgaaaaacta tattcctgaa ctagataagg
    17101 tagctggcat gatttcagca tcttatacgg gaggtggtgt taattttgca gctatgtcag
    17161 ctaagcttaa ccctgctaaa gatgttattg cagcaacaat tgttgctgat aatttgatga
    17221 tggcttgtta cttttttatt ttgattggta tctcttcctc atattgggtc agaaaagttt
    17281 ggggaagtcc atatcaggat aaattggagc aggaatatca tgatccgagt gtgaataagg
    17341 ctgccgagta ttggaaacct aaatccattt cgctacagag tatagcctta tctttggctg
    17401 cctcgatttt gttggtcgca gtttcattct cattatccag ttttttgcaa aatcattttc
    17461 aaagtgttga tggtgttgca ttaaaaatgc tgacaggttt aattagtgac aaatatttgc
    17521 tgttaacgac atttacattg gcagttgttt tatttttccg taaaggcatt caaaaactag
    17581 atggcagtca agaattaggg acatattgta tttatctgtt ttttgttgtg attggtgttc
    17641 ctgcctctat accgttaatt attaaaacag caccattact ctttgttttt actttgatta
    17701 ttgcggtatt gaatttgtta ctgacgttag tgttaggcaa gctgttcaaa ttcagtattg
    17761 aagaaattgt attggcttgt aatgccaata ttggagggcc gactactgca gcagccttag
    17821 ccatcagtaa aggttggcgt gatttagtcg gtgcaatttt gttaattggt actgtaggct
    17881 acattatcgg taactatata ggttcgtttg tatatgccct attgagctga agactaatct
    17941 aacaatccat gaaccttttc agacgacccc cttcaaaaaa cgtcgtctga aaccccaaac
    18001 cacaagaaaa atagatccac aggagaactg aacatggctg ccaaccaacg ttaccgcaaa
    18061 ccgctacccg gtacggattt ggaatactac gacgcgcgtg cggcgtgtga ggacatcaaa
    18121 cccggctctt acgacaagct gccttataca agccgtatct tggctgagaa cttggtcaac
    18181 cgcgcagaca aagtcgacct gccgacgctg caaagctggc tgggccagtt gatagaaggg
    18241 aagcaggaaa tcgactttcc gtggtatccc gcgcgggtgg tgtgccacga tattctgggg
    18301 cagaccgcgc tggtggattt ggcgggcttg cgcgatgcga ttgccgaaaa aggcggcgat
    18361 cctgccaaag tgaatccggt ggtgcaaacc cagcttatcg tcgaccactc tctggcggtg
    18421 gagtgcggcg gttacgatcc tgatgccttc cgcaaaaacc gcgaaatcga agaccggcgc
    18481 aacgaagacc gtttccactt catcaactgg acaaaaaccg catttgaaaa tgtggacgtg
    18541 attccggcgg gcaacggcat tatgcaccaa atcaatctgg aaaaaatgtc gcccgtcgtc
    18601 caagtcaaaa acggcgtggc tttccccgat acctgcgtcg gcacggattc gcacacgcca
    18661 cacgtcgatg cgctgggcgt gatttccgta ggcgtgggcg gtttggaagc cgaaaccgta
    18721 atgttaggcc gtgcatccat gatgcgtctg cctgatattg tcggcgttga gttgactggc
    18781 aaacgtcaac ctggcattac tgccaccgac atcgtgttgg cactgaccga attcttgcgt
    18841 aaagagcgcg tggttggcgc atttgtcgaa ttcttcggcg agggcgcaag aagcctgtct
    18901 atcggcgacc gagccactat ttccaacatg acccctgagt tcggcgcgac tgccgcgatg
    18961 ttcgctattg atgagcaaac cattgattat ttgaaactga caggccgcga cgacgcgcaa
    19021 gtgaaattgg tggaaaccta cgccaaaacc gcaggcttgt gggcagatgc cttgaaaacc
    19081 gccgtttatc ctcgcgtatt gaaatttgat ttaagcagcg taacgcgcaa catggcaggc
    19141 ccaagtaacc cgcatgcccg ttttgcgact gccgatttgg ccggcaaagg cttggctaaa
    19201 ccttatgaag agccttcaga cggccaaatg cctgacggtg cagtgattat tgccgcgatt
    19261 acttcctgta ccaatacttc caatccgcgc aacgttgtcg ccgccgcgct gttggcacgc
    19321 aatgccaacc gcctcggctt gcaacgtaaa ccttgggtga aatcttcgtt tgccccgggt
    19381 tcaaaagtag ccgaaatcta tttgaaagaa gcaggcctac tgcctgaaat ggaaaaactc
    19441 ggcttcggta tcgttgcctt cgcatgtacc acctgtaacg gcatgagcgg tgcgctggat
    19501 ccgaaaatcc aaaaagaaat catcgaccgc gatttgtacg ccaccgccgt attatcaggc
    19561 aaccgcaact tcgacggccg tatccacccg tatgcgaaac aggctttcct cgcttcgcct
    19621 ccgttggtcg ttgcctacgc gctggcaggc agtatccgtt tcgatattga aaacgacgta
    19681 ctcggcgttg cagacggcaa ggaaatccgc ctgaaagaca tttggcctgc cgatgaagaa
    19741 atcgatgccg tcgttgccga atatgtgaaa ccgcagcagt tccgcgatgt gtatgtaccg
    19801 atgttcgaca ccggcacagc gcaaaaagca cccagtccgc tgtacgattg gcgtccgatg
    19861 tccacctaca tccgccgtcc gccttactgg gaaggcgcgc tggcagggga acgcacatta
    19921 agaggtatgc gtccgctggc gattttgccc gacaacatca ccaccgacca cctctcgccg
    19981 tccaatgcga ttttggccgt cagtgccgca ggcgagtatt tggcgaaaat gggtttgcct
    20041 gaagaagact tcaactctta cgcaacccac cgcggcgacc acttgaccgc ccaacgcgct
    20101 accttcgcca atccgaaact gtttaacgaa atggtgaaaa acgaagacgg cagcgtgcgc
    20161 caaggctcgt tcgctcgcgt cgaacccgaa ggcgaaacca tgcgcatgtg ggaagccatc
    20221 gaaacctata tgaaccgcaa acagccgctc atcatcattg ccggtgcgga ctacggtcaa
    20281 ggctcaagcc gcgactgggc tgcaaaaggc gtacgcctcg ccggcgtgga agcgattgtt
    20341 gccgaaggct tcgagcgtat ccaccgcacc aacttgatcg gtatgggcgt gttgccgttg
    20401 cagttcaaac cgggtaccaa ccgccatacc ctgcaactgg acggtacgga aacctacgac
    20461 gtggtcggcg aacgtacacc gcgctgcgac ctgaccctcg tgattcaccg taaaaacggc
    20521 gaaaccgttg aagttcccgt tacctgccgc ctcgataccg cagaggaagt gctggtgtac
    20581 gaagccggcg gcgtgctgca acggtttgca caagactttt tagaaggtgt ggtagcataa
    20641 aggtagacgg tcttttttat gatttatgag aagaccgttt gaaaattatt tatggttaaa
    20701 tttttaattt aaattaaaca gtaaatatga agacacaaga agatgaggta actaagcaga
    20761 aaatttttaa tcatatgatt aataataaat catttttaaa tttccagttt tggacatttg
    20821 ctgctttgag tgcaggttca tttgcctttc taataagtgc agcaaatata gattctaaag
    20881 atagagactt gacgcttgaa atagccattg ttggatattc agtaagttta atattaaatt
    20941 ccatactatg ttttttaata agaggcatag aagacgatga gttatcggtt aaaatgttaa
    21001 atgaatttaa tttggataag cgtacttttt ggattcccat tctagcaacg tggagttttg
    21061 cgctttcgac acttttctta ttgtttacca ttagtctagt aggagcaatt actgctctta
    21121 taatggctgt tttagcaata attagtttta taaaatttac aaaaaaatca tagattttta
    21181 caatttgaag tggtgcgtaa atcgggcatt gatgcccgac acagaagttg taggttgagt
    21241 taagccccgg cattttgcta aatccaacgg ttttttcggg tttgcaaccc aacctacctc
    21301 tgctgctaat ctgcatcata caaaggagaa ctcgaaatgc cgcaaattaa aatccccgcc
    21361 gtttactacc gcggcggtac atctaaaggc attttcttca aacgcaccga cctgcccgaa
    21421 gcggcgcaac aagcaggcga ggcacgcgac aaaatcctgt tgcgcgtact cggcagcccg
    21481 gatccctacg gcaagcagat agacggtttg ggcaacgcca gttcgtccac cagcaaagcc
    21541 gtgattttgg acaagtccga acgcgccgat cacgatgtcg attacctttt cgggcaagtt
    21601 tccatcgaca aaccttttgt cgattggagc ggcaactgcg gcaacctcac cgctgccgtg
    21661 ggcgcattct ccatcgaaca gggcttggtc gataaaggca agattccttc agacggcatc
    21721 tgcacggtca aaatctggca gaaaaacatc ggcaaaacca ttattgccca tgtaccgatg
    21781 caaaacggcg cagttttgga aacaggcgat tttgagctcg acggcgtaac gttcccggca
    21841 gccgaagtac aaatcgaatt tcttgatcca gccgacggcg aaggcagtat gttcccaacc
    21901 ggcaatttgg tcgatgaaat tgatgtgccg aatataggcc gtttgaaagc cacgctcatc
    21961 aacgcgggca ttccgaccgt tttcttgaat gccgccgact tgggctacac aggcaaagag
    22021 ttgcaagacg acatcaacaa cgatgccgcg gctttggaaa aattcgagaa aatccgcgct
    22081 tacggtgcgc tgaaaatggg tctgatcagc gacgtatccg aagctgccgc tcgcgcgcac
    22141 acgccgaaag tcgccttcgt cgcgcccgcc gccgattaca ccgcctccag tggcaaaacc
    22201 gtgaacgccg ccgacatcga tttgctggta cgcgccctga gcatgggcaa actgcaccac
    22261 gcgatgatgg gtaccgcctc tgttgccatt gcgaccgccg ccgccgtacc cggtacgctg
    22321 gtcaaccttg ccgcaggcgg cggaacgcgt aaagaagtgc gcttcgggca tccttccggc
    22381 acattgcgcg tcggtgcagc cgccgaatgt caggacggac aatggacggc caccaaagcg
    22441 gtcatgagcc gtagcgcacg cgtgatgatg gaaggttggg tcagggtgcc tgaggattgt
    22501 ttttaaattg acgtagcatg ggtttgcccg cgagccataa aaaggtcgtc tgaaaaacaa
    22561 gtaaacatca aatcactgac cattcctttc ccttgccctg tggcggaagg cggcaaatca
    22621 caaggaagaa cacggaaacc ccgataaaag acagcttccc gtattaccgt cattcccgcg
    22681 caggcgggaa tccagacctg tcaatatgga ggattggcag gggaaaacag gtttcgtgag
    22741 ttctacattc tggattcccg ccacagcctg tcctcgcgta ggcggggacg gaataacgat
    22801 agaaaatgcg gcatatgctt tgcccaaaga ggccgtctga aacacactcc gcccaacgcc
    22861 catccttttt cagacgaccc cacaccaaaa aacaaccaca aactacaagg agaaacatca
    22921 tgtccgacca actcattctt gttctgaact gcggcagttc atcgctcaaa ggtgccgtta
    22981 tcgaccgcaa aagcggcagc gtcgtcctaa gctgcctcgg cgaacgcctg accacgcccg
    23041 aagccgtcat tacgttcagc aaagacggca acaaacgcca agttcccctg agcggccgca
    23101 actgccatgc cggcgcggtg ggtatgctgc tgaacgaact ggaaaaacac ggactgcacg
    23161 accgcatcaa agccgtcggc caccgcatcg cccacggcgg cgaaaaatac agcgagtctg
    23221 ttttgatcga ccaggccgta atggacgaac tcaatgcctg cattccgctt gcgccgctgc
    23281 acaaccccgc caacatcagc ggcatccttg ccgcacagga acatttcccc ggtctgccca
    23341 atgtcggcgt gatggatact tcgttccacc aaaccatgcc ggagcgtgcc tacacttatg
    23401 ccgtgccgcg cgagttgcgt aaaaaatacg ctttccgccg ctacggtttc cacggcacca
    23461 gtatgcgtta cgttgcccct gaagccgcac gcatcttggg caaacctctg gaagacatcc
    23521 gcatgattat tgcccactta ggcaacggcg catccattac cgccatcaaa aacggcaaat
    23581 ccgtcgatac cagtatgggt ttcacgccga tcgaaggttt ggtaatgggt acacgttgcg
    23641 gcgacatcga tccgggcgta tacagctatc tgacttccca cgccgggatg gatgttgccc
    23701 aagtggatga aatgctgaac aaaaaatcag gtttgctcgg tatttccgaa ctttccaacg
    23761 actgccgcac cctcgaaatc gccgccgacg aaggccacga aggcgcgcgc ctcgccctcg
    23821 aagtcatgac ctaccgcctc gccaaataca tcgcttcgat ggctgtgggc tgcggcggcg
    23881 ttgacgcact cgtgttcacc ggcggtatcg gcgaaaactc gcgtaatatc cgtgccaaaa
    23941 ccgtttccta tcttgatttc ttgggtctgc acatcgacac caaagccaat atggaaaaac
    24001 gctacggcaa ttcgggcatt atcagcccga ccgattcttc tccggctgtt ttggttgtcc
    24061 cgaccaatga agaactgatg attgcctgcg acactgccga acttgccggc atcttgtagc
    24121 caaaaaaggg acgagtccgc aaaaatgccg tctgaaattt tcagacggca ttttgtttgg
    24181 attttgggcg tacaatacgg aaaacatgac gataaggaca caaactatgg cacagttttt
    24241 cgccgttcat cccgacaacc cccaagaacg cctcatcaag caggcggtcg aaatcgtcaa
    24301 taaaggcggc gtggtcgttt atccgaccga ttcctgttat gccttgggct gcaaactcgg
    24361 cgataaggcg gcgatggaac gcatactctc catccgcaaa atcgatttga aacaccacct
    24421 gaccctgatg tgcgcagatt tgagcgagtt gggcacatac gccaaagtcg acaacgtaca
    24481 gtttcgtcag cttaaagccg ccacacccgg gccttatact tttattttac aggcgacgaa
    24541 ggatgtgccg gcgcgcacgc tgcacccgaa acgcaaaacc atcgggctgc gtattcccga
    24601 taatgccatt gcacaagccc tgctggggga attgggcgag ccgcttttaa gctgcaccct
    24661 gatgctgccc gaagacggcg aaccattgac cgatccttat gaaatccgcg agcgtttgga
    24721 acacgccgtc gatttggtga ttgacggcgg ctggtgcgga accgagccga ccaccgtcgt
    24781 cgatatgacc gacggcacgg aattggtgcg ccaaggttgc ggcgatacgg cggtgttcgg
    24841 tttgtaggga aaccgatgcc gtctgaagca tcggctgttc agacggcatt gcgcgccttg
    24901 ccggcggcag tccgaaatgc cggcgcgtat cgcgctcggt cggaatatcc gtttgaaacg
    24961 gcattttgat gcattactgc accgcaatcg gaattctcgg ttcgtagagc aggtcgtagg
    25021 tcggcttgtt gagcaggtct tggagcgtga aaccgtccag atacgtgaaa aacgacttca
    25081 tcgcgccgcc gagtatgccc gtcagccggc aggacggtgt aatcaggcat tcgttgttct
    25141 cgcccatgca ctcgaccagc tgcatcggtt cgaggtggcg gacaaccgag ccgatgttga
    25201 tgcggtcggg cggtgcggca agccgcagac cgccgccttt tccgcgcaca ctgtggagga
    25261 agccgccttt gaccagcgcg gtaacgacct tcatcagatg gcttttggaa atgccgtagg
    25321 ttacggcgat ggtactgatg ttgaccagcg catcgtcgtt gatggcagtg tagataagga
    25381 cgcgcagccc gtagtccgta tgttgtgtca aatacatgat tttctcggta tggattgtta
    25441 ttcttatcgg tacggtttaa ggttcacgga caatacctta atggttgaaa ccctgtccgt
    25501 cggggcggta gaatgcagcc tgtctgcggc ggtatgccgt ctgaaacatc cgcgctaccg
    25561 tttgagaatt tgttattgta actcaaaatc atgaaaccgt tgaaacgaca tcccgccctt
    25621 atcgggcttt cgcgtgacca ccaccattcg ctttccctgt gcgtgcgtct gttgcggacg
    25681 ccggaagaaa ggcatcggga cgaactcgaa ccgcattttt ccgaattgga aacccatttt
    25741 cgcgaagaag aagccaagtt tgccccaatt tggcagaatg tcgcccccga attgaaacaa
    25801 cgtttcgaga aagaccacgc ccgactgcgg cagatgatgg caagccccga atacggtaac
    25861 gcggcgtgga ataccgcttt tgccacaacc ctgcgcgacc acgcgcgctt tgaagaacgc
    25921 gagctgtttc ccgccgccga accgtttttg ccggcatgat tccgttttgc ggcaaatata
    25981 ttaatgataa acaaggaaca cacatgaaat ttaccaagca ccccgtctgg gcaatggcgt
    26041 tccgcccatt ttattcgctg gcggctctgt acggcgcatt gtccgtattg ctgtggggtt
    26101 tcggctacac gggaacgcat gagctgtccg gtttctattg gcacgcgcat gagatgattt
    26161 ggggttatgc cggactggtc gtcgtcgcct tcctgctgac cgccgtcgcc acttggacgg
    26221 ggcagccgcc cacgcggggc ggcgttctgg tcggcttgac tatcttttgg ctggctgcgc
    26281 ggattgccgc ctttatcccg ggttggggtg cgtcggcaag cggcatactc ggtacgctgt
    26341 ttttctggta cggcgcggtg tgcatggctt tgcccgttat ccgttcacag aatcaacgca
    26401 actatgttgc cgtgttcgcg ctgttcgtct tgggcggcac gcacgcggcg ttccacgtcc
    26461 agctgcacaa cggcaaccta ggcggactct tgagcggatt gcagtcgggc ttggtgatgg
    26521 tgtcgggttt tatcggtctg attggtacgc ggattatttc gttttttacg tccaaacggt
    26581 tgaatgtgcc gcagattccc agtccgaaat gggtggcgca ggcttcgctg tggctgccca
    26641 tgctgaccgc catgctgatg gcgcacggcg tgatgccttg gctgtcggcg gctttcgcgt
    26701 ttgcggcagg tgtgattttt accgtgcagg tgtaccgctg gtggtataaa cccgtgttga
    26761 aagagccgat gctgtggatt ctgtttgccg gctatctgtt taccggattg gggctgattg
    26821 cggtcggcgc gtcttatttc aaacccgctt tcctcaatct gggtgtgcat ctgatcgggg
    26881 tcggcggtat cggcgtgctg actttgggca tgatggcgcg taccgcgctc ggtcatacgg
    26941 gcaatccgat ttatccgccg cccaaagccg ttcccgttgc gttttggctg atgatggcgg
    27001 caaccgccgt ccgtatggtt gccgtatttt cttccggcac tgcctacacg cacagcatac
    27061 gcacctcttc ggttttgttt gcactcgcgc ttttggtgta tgcgtggaag tatattcctt
    27121 ggctgattcg tccgcgttcg gacggcaggc ccggttgaga caaaccgccg cagatttcgg
    27181 gtctgggcgg tttgcttttc agacggcagg gcggtcagtt gccgtccagc cagcggtcgc
    27241 gtgtggtttt ggcttcttca aaatagcggt acagggcttc gcggtcgtcg gtggtcagga
    27301 tgtttgccaa aacgtccaac tgtttgccca agccttgaac cagttgcagc aggctgtctt
    27361 tgttggcaag gcagatgtcc gcccacacgg cgggatgacc ggaggcgatg cgggtgaagt
    27421 cccgaaagcc cgtggcggcg aatttcagat attcctgtcc gtcggggtgg tcgagaatct
    27481 ggtggacata ggcgaaggcg gtcaggtggg gcatatggga gacggcagcg aaaaccgcgt
    27541 cgtggcgttg cgcgtccatc gtataaattt ccgcaccgac cgcgtgccac agttcttcta
    27601 ccaaggcaat gccgtctgaa tgttcgccgc cgtgtggcgt gatgatgagt tttctgtggc
    27661 ggaacagccc gaactgcgcg gcttgcgcac cgcttctgtc cgaaccggca atcgggtggg
    27721 cggcgatgca gcggtgcagg cggtcgggca gacagcggcg gaaggcttcg atgaccgaag
    27781 atttggtgct gccgacatcg gaaatccaag tgtgttccgg caaaacgggg cgcagcgcgg
    27841 tcaaaatggc gggaaaggtg gcgacgggcg tggcaatcag taccaagtcc gcaccgccga
    27901 tgctgtccgc gtcgatggca acggaggcac ggtcaatcac gccgcgttcc aatgcacgtt
    27961 cgaggttgtc gcggtcggtg tcgataccgg taacggtgcg gacgagtccc tgccttttga
    28021 ggtcgagaac gaacgaaccg ccgatcagcc ctacaccgat gagggcaata tggttcaaaa
    28081 tgggcatttg tgtaaacggt tttcgcaaag taccgtcatg gtagcctatc ggcggaatat
    28141 gccgcaaggt cggcaggaaa aaggagaaga aatggacaaa atcagagttg ccgccgtgca
    28201 gatggtgtcg ggcgtgtcgc cggaaaccaa cgtcgctgcc atgaaacgcc tggtcgcacg
    28261 ggcggcggag cagggtgtgg attgggtgct gctgcccgaa tattgggtgc tgatgggcgc
    28321 aaacgatacc gacaaactcg cgcttgccga gcctttgggc ggcggacgct ttcagacggc
    28381 attgagcgaa acggcgaaag aatgcggcgt ggtgctgttt ggcggaaccg tgccgctgca
    28441 aagccccgag gcgggcaagg tcatgaatac tttattggtg tacgggcgcg acggcaaacg
    28501 gacggggctg taccacaaaa tgcacctctt cggcttttcc ggtttgggcg aacgctatgc
    28561 cgaagccgat accatccgcg cgggcgggga agtgccgcac ttgtcggcag agggcgtgcc
    28621 ggtggcagca ggtatttgtt acgatgtccg ctttcccgaa tttttccgcc gccagctgcc
    28681 gtttgacgta ttgatgctgc ccgctgcgtt tacgcacacg acgggcaagg cgcattggga
    28741 gctgctgctg cgcgcgcgtg ccgtcgaaaa ccaatgttac gtcgtggcgg cggcacaggg
    28801 cggtttgcac gaaaacggac ggcgcacgtt cggacacagc atgattgtcg atccgtgggg
    28861 cgacgtgttg gacgtattgc ccgaaggcga aggcgttgtt acggcagaca tcgatgccaa
    28921 ccgcctgaac agcgtccgca accgcctgcc cgccttgaaa cactgggttt tggatgccgt
    28981 ctgaaggttt caaacggcat cggtgtcggg gaatcagcgg gctgtaggat gggcttcagc
    29041 ctgccatttc catcaatccc acatttctac cgttttcatc gaatccatcg aatccgcccc
    29101 tttcgacgac ccagtcctac gcaactgaac cgtcattccc acggaagtgg gaatctagaa
    29161 tctcggggtt tcagtcattt ccgatagatt cccgccgcgt cggaggtcta gattcccgcc
    29221 tgcgcgggaa tgacgga
//
LOCUS       DBBZXU010000012        28306 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.012, whole genome shotgun sequence.
ACCESSION   DBBZXU010000012 DBBZXU010000000
VERSION     DBBZXU010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 28306)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28306)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28306
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.012"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..274)
                     /locus_tag="ACJJDE_000447"
     CDS             complement(<1..274)
                     /locus_tag="ACJJDE_000447"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540435.1"
                     /translation="MAGATIRIIDRQTDEVIAKKTIYVFEKGLDGTGGARMPWKFAIL
                     CNKERLTSSEPLSDFVLSVLKPYILRPLYIASLIYCVPKKGRLTKIN"
     gene            complement(345..572)
                     /locus_tag="ACJJDE_000448"
     CDS             complement(345..572)
                     /locus_tag="ACJJDE_000448"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540436.1"
                     /translation="MLLKVVPERTVSADAKTRDPMWDNAALQTSEGVNFIARFLGFFS
                     DGEYRYVDVLQPNHSDIIRYSGKDFSAKSNT"
     gene            complement(563..916)
                     /locus_tag="ACJJDE_000449"
     CDS             complement(563..916)
                     /locus_tag="ACJJDE_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540437.1"
                     /translation="MFTTNDLRHFLEGLAILFSIGYWGTMLLLLWFLVRFAYKKPKRN
                     PGKILSGSLTAAAILMLFVWIIPKQFGPIKEEIQAQEEWDRKYKEAEAVFNEQCKTAG
                     ERFTRRRTMWKGLCC"
     gene            1152..2579
                     /locus_tag="ACJJDE_000450"
     CDS             1152..2579
                     /locus_tag="ACJJDE_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HGG7540438.1"
                     /translation="MFFSALKSFLSRYITVWRNVWAVRDQLKPPKRTAEEQAFLPAHL
                     ELTDTPVSAAPKWAARFIMAFALLALLWSWFGKIDIVAAASGKTVSGGRSKTIQPLET
                     AVVKAVHVRDGQHVKQGETLAELEAVGTDSDVVQSEQALQAAQLSKLRYEAVLAALES
                     RTVPHIDMAQARSLGLSDADVQSVQVLAQHQYQAWAAQDAQLQSALRGHQAELQSAKA
                     QEQKLVSVGAIEQQKTADYRRLRADNFISEHAFLEQQSKSVSNWNDLESTRGQMRQIQ
                     AAIAQAEQNRVLNTQNLKRDTLDALRQANEQIDQYRGQTDKAKQRQQLMTIQSPADGT
                     VQELATYTVGGVVQAAQKMMVIAPDDDKMDVEVLVLNKDIGFVEQGQDAVVKIESFPY
                     TRYGYLTGKVKSVSHDAVSHEQLGLVYTAVVSLDKHTLNIDGKAVNLTAGMNVTAEIK
                     TGKRRVLDYLLSPLQTKLDESFRER"
     gene            2648..4051
                     /locus_tag="ACJJDE_000451"
     CDS             2648..4051
                     /locus_tag="ACJJDE_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HGG7540439.1"
                     /translation="MTLLNLMIMQDYGISVCLTLTPYLQHELFSAMKSYFSKYILPVS
                     LFTLPLSLSPSVSAFTLPEAWRAAQQHSADFQASHYQRDAVRARQQQAKAAFLPHVSA
                     NASYQRQPPSISSTRETQGWSVQVGQTLFDAAKFAQYRQSRFDTQAAEQRFDAAREEL
                     LLKVAESYFNVLLSRDTVAAHAAEKEAYAQQVRQAQALFNKGAATALDIHEAKAGYDN
                     ALAQEIAVLAEKQTYENQLNDYTDLDSKQIEAIDTANLLARYLPKLERYSLDEWQRIA
                     LSNNHEYRMQQLALQSSGQALRAAQNSRYPTVSAHVGYQNNLYTSSAQNNDYHYRGKG
                     MSVGVQLNLPLYTGGELSGKIHEAEAQYGAAEAQLTATERHIKLAVRQAYTESGAARY
                     QIMAQERVLESSRLKLKSTETGQQYGIRNRLEVIRARQEVAQAEQKLAQARYKFMLAY
                     LRLVKESGLGLETVFAE"
     gene            complement(4215..5002)
                     /locus_tag="ACJJDE_000452"
     CDS             complement(join(4215..4747,4747..5002))
                     /locus_tag="ACJJDE_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611222.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HGG7540440.1"
                     /translation="MSQTAATFNLSRNTLYLWIRLKKQTGSLKHQVTGLNAVKSDRQK
                     PAQYVGQHQDAYLHEIAKHFDCTAATVCYALKQMGITRKKRPTTYKEQDPAKVTHYLT
                     QPAEFSDYQRVYLDETGFDRHLFRPYARSLKGQIVKAQISGKRYRRLSLVSAQVGNRL
                     IAPMVYQNTMTGVFFEAWFQQCLLPALTQKSVIILDNARFHRMGVLREMAEKLGHKVL
                     PLAPYSPELNPIEKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
     gene            complement(5294..7507)
                     /locus_tag="ACJJDE_000453"
     CDS             complement(5294..7507)
                     /locus_tag="ACJJDE_000453"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7540441.1"
                     /translation="MTAISPIQDTQSATLQELREWFDSYCAALPNNDKKLVLAARSLA
                     EAHYPADAATPYGEPLPDHFLGAAQMVHELDLLPDAVAATLLADIGRYVPDWNLLVSE
                     RCNSTVAELVKGVDEVQKLTHFARVDSLATPEERAQQAETMRKMLLAMVTDIRVVLIK
                     LAMRTRTLQFLSNAPDSPEKRAVAKETLDIFAPLANRLGVWQLKWQLEDLGFRHQEPE
                     KYREIALLLDEKRTERLEYIENFLNILRTELKKYNIHFEVAGRPKHIYSIYKKMVKKK
                     LSFDGLFDIRAVRILVDTVPECYTTLGIVHSLWQPIPGEFDDYIANPKGNGYKSLHTV
                     IVGPEDKGVEVQIRTFDMHQFNEFGVAAHWRYKEGGKGDSAYEQKIAWLRQLLDWREN
                     MAESGKEDLAAAFKTELFNDTIYVLTPHGKVLSLPTGATPIDFAYALHSSIGDRCRGA
                     KVEGQIVPLSTPLENGQRVEIITAKEGHPSVNWLYEGWVKSNKAIGKIRAYIRQQNAD
                     TVREEGRVQLDKQLAKLTPKPNLQELAENLGYKKPEDLYTAVGQGEISNRAIQKACGT
                     LNEPPPVPVSETTIVKQSKIKKGGKNGVLIDGEDGLMTTLAKCCKPAPPDDIVGFVTR
                     DRGISVHRKTCPSFRHLAEHAPEKVLDASWAALQEGQVFAVDIEIRAQDRSGLLRDVS
                     DALARHKLNVTAVQTQSRDLEASMRFTLEVKQVNDLPRVLASLGDVKGVLSVTRL"
     gene            7836..8477
                     /locus_tag="ACJJDE_000454"
     CDS             7836..8477
                     /locus_tag="ACJJDE_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GrxB family glutaredoxin"
                     /protein_id="HGG7540442.1"
                     /translation="MKLYIYDHCPFCVRARMAAGLFGADVEEAVLANDDEATPIGMIG
                     AKQVPVLQKEDGSFMGESLDIVRHFDREDRLKDEVRPEIRAWLDKVGGYNDKLVQPRV
                     IKIGLPEFATPEAVKYFTDKKEKSIGSFSANLNKTAQYLERINADLQELENLMDGASD
                     GINGGIGMEDILVFPVLRNLTVVRGIAFPRKTMDYLIGMSEKSGVPLYFDRAL"
     gene            8814..9320
                     /locus_tag="ACJJDE_000455"
     CDS             8814..9320
                     /locus_tag="ACJJDE_000455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540443.1"
                     /translation="MDAFDFFMQGNFKKIATEQGLDRKYFIFHYIVCNLSAISSFCLM
                     KVIHSYTILCLLIMIIGIAFGFILRNRVLSIVKNKQNFLSDMFPLEMPFFSRVYKIPI
                     LARFLNRGMKWLYLQNFFCLVMICFSISLILNEERGWMPYFACYWFGLCYPVSTYYVF
                     LSRDYKHI"
     gene            9456..10256
                     /locus_tag="ACJJDE_000456"
     CDS             9456..10256
                     /locus_tag="ACJJDE_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HGG7540444.1"
                     /translation="MKKTIFNITKMDCPSEEQLIRMRLKDVSDIYELQFDIAGRCLTV
                     YHDNQDTTILQVLEPLNFDSHIISTEVIVDKIVFNKPDEHLEKRLLYQVLMINFVFFI
                     IECSVGIFANSMGLIADSLDMLADSFVYILALSAIGMTLAYKKRVAFLAGITQIILAL
                     FGVIEVIRRFIGAEQLPNYQLMIGTAFLALIANWLCLYLLSKNQNKEIHIKASMIFTS
                     NDIIINIGVIAAGALTLLTHSSYPDLIIGMIVFVIVLFGARNILKLAK"
     gene            complement(10708..11346)
                     /locus_tag="ACJJDE_000457"
     CDS             complement(10708..11346)
                     /locus_tag="ACJJDE_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HGG7540445.1"
                     /translation="MFQNFDLGVFLLAVLPVLLAITVREVARGYTARYWGDNTAEQYG
                     RLTLNPLPHIDLVGTIIVPLLTLMFTPFLFGWARPIPIDSRNFRNPRLAWRCVAASGP
                     LSNLAMAVLWGVVLVLTPYVGGAYQMPLAQMANYGILINAILFALNIIPILPWDGGIF
                     IDTFLSAKYSQAFRKIEPYGTWIILLLMLTGVLGAFIAPIVRLVIAFVQMFV"
     gene            11601..12443
                     /locus_tag="ACJJDE_000458"
     CDS             11601..12443
                     /locus_tag="ACJJDE_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0031992 - energy transducer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HGG7540446.1"
                     /translation="MDKERILTPAVVFSVALLHLAMVALLWQAHKLPVIESGNVIEFV
                     DLGDFGGGDGAPEGAGAPAAPEPQPEPEPPKPVEPPKPVLKPVVTKKADADIQQPKEE
                     PKPEEKPKPEEKPKPEPKPEAKPVPKPAEKPVERPSEKPAEHPSNASAKADSEQGNGE
                     DKGTGTKGDGTGRGEGSGKGSGGVKGEHGEGAGSSKGNPLRANGSIPRPAYPTLSMEN
                     DEQGTVVLSVLVSPGGHVESVKIVKSSGFSRLDNAARKAAQNGHFQANAWTEFKVPVK
                     FELN"
     gene            12509..13171
                     /gene="exbB"
                     /locus_tag="ACJJDE_000459"
     CDS             12509..13171
                     /gene="exbB"
                     /locus_tag="ACJJDE_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-system energizer ExbB"
                     /protein_id="HGG7540447.1"
                     /translation="MNLKLVFESGDPVLIGVFVLMLLMSIVTWCLVVLRCIKLYRARK
                     GNAAVKRHMRDTLSLNDAVEKVRAVDAPLSKLAQEALQSYRNYRRNEASELAQALPLN
                     EYLVIQIRNSMAQIMRRFDYGMTALASIGATAPFIGLFGTVWGIYHALINIGQSGQMS
                     IAAVAGPIGEALVATAAGLFVAIPAVLAYNFLNRGTKILTQDLDAMAHDLHVRLLNQK
                     DS"
     gene            13192..13626
                     /locus_tag="ACJJDE_000460"
     CDS             13192..13626
                     /locus_tag="ACJJDE_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ExbD/TolR family protein"
                     /protein_id="HGG7540448.1"
                     /translation="MAFGSMNSGDDSPMSDINVTPLVDVMLVLLIVFMITMPVLTHSI
                     PLELPTASEQTNKQDKQPKDPLRLTIDANGGYYVGGDSASKVEIGEVESRLKAAKEQN
                     ENVIVAIAADKAVEYDYVNKALEAARQAGITKIGFVTETKAQ"
     gene            complement(14117..14545)
                     /locus_tag="ACJJDE_000461"
     CDS             complement(14117..14545)
                     /locus_tag="ACJJDE_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01244 family sulfur transferase"
                     /protein_id="HGG7540449.1"
                     /translation="MAILKLDEHLYISPQLTKADAEQIAQLGIKTVICNRPDREEESQ
                     PDFAQIKQWLEQAGVTGFHHQPVTARDIQKHDVETFRQLIGQAEYPVLAYCRTGTRCS
                     LLWGFRRAAEGMPVDEIIRRAQAAGVNLENFRERLDNARV"
     gene            complement(14610..16358)
                     /locus_tag="ACJJDE_000462"
     CDS             complement(14610..16358)
                     /locus_tag="ACJJDE_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M61 family metallopeptidase"
                     /protein_id="HGG7540450.1"
                     /translation="MIHYKITPSPLDHEWHILLTFTQDDDLPIEISLPNWVPGSYLIR
                     DFSRHITSIHASCNGTSMPLEQIAKNRWHAAAVRGEWQIRYTVYAFDLSVRGSFLTTE
                     RGFFDGSCLFLKVEGTETLPHRLELTGIPSEWRIATTLPETGRFVFQAASYAELIDRP
                     VEMGLIEFLDFEAAGIPHTIALSGIYPDFDRNRLVSDIKKICETELAVFSSPAPFQKY
                     LFLLHVGDHIYGGLEHADSTALLADRHSLPPFGMTDADDAYTTLLGLFSHEYFHAWNV
                     KSIKPAAFAPYDLDKENYTEQLWAFEGITSYYDDLFLARSRTISPESYLNLLAQGITR
                     VQQTRGRLRQTLAESSFTAWNKFYKPDENSPNAIVSYYQKGALAALCLDLIIRNRSNG
                     RHSLDTIMDKLYREWRDTHSGIPEKHWQIRCQEITGLDLEDFFQKALYSTENLPLAEC
                     LATAGVGLTFLPLPRQHGGGYAEHICPVPSAGDFGARFKQNADHIVLTHVFNGGSAES
                     AALCPQDKIIALDGYACTDFTAQWARYHVNAKINIHFFRAGILRQTVLTVQAAAADTA
                     ILHITDRNLLDNWLFG"
     gene            16685..18118
                     /gene="ccoN"
                     /locus_tag="ACJJDE_000463"
     CDS             16685..18118
                     /gene="ccoN"
                     /locus_tag="ACJJDE_000463"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045278 - plasma membrane respiratory
                     chain complex IV [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit I"
                     /protein_id="HGG7540451.1"
                     /translation="MDTQTYNYKVVRQFAIMTVVWGIVGMLVGVIVAAQLFAPALDLS
                     NIGPWFHFGRLRPLHTNAVIFAFGGCGLIGTSYYVVQRTCNTRLFGGWLPAFTFWGWQ
                     AVIVAAVVSFPMGWTQGKEYAELEWPIDILITLVWVAYAIVFFGTIAKRKIKHIYVAN
                     WFYGGFILAVALLHIVNNISIPAGLMKSYPVYSGAIDAMVQWWYGHNAVGFFLTAGFL
                     GMMYYFVPKQAARPVYSYRLSVVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVLSL
                     ILFAPSWGGMINGIMTLSGAWDKLRTDPILKFLIVSLSFYGMSTFEGPMMSIKTVNAL
                     SHYTDWTVAHVHAGALGWVGFVTIGSVYYMIPRLFGKEQMHSTKLVEAHFWIATIGVV
                     LYIAAMWIAGVMQGLMWSSLNDDGTLTYSFVESVKRTMPYYVIRFAGGLLYLSGMCIM
                     AYNVYRTAIGGKAVDAEIPAVSQTQHH"
     gene            18145..18756
                     /gene="ccoO"
                     /locus_tag="ACJJDE_000464"
     CDS             18145..18756
                     /gene="ccoO"
                     /locus_tag="ACJJDE_000464"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit II"
                     /protein_id="HGG7540452.1"
                     /translation="MKLQQLAEEKIGVLIVFTLLVVSVGLLIEVVPLAFTKAATQPAP
                     GVKPYNALQVAGRDIYIREGCYNCHSQMIRPFRAETERYGHYSVAGESVYDHPFQWGS
                     KRTGPDLARVGGRYSDEWHRIHLLNPRDVVPESNMPAFPWLARNKVDVDATVANMKAL
                     RKVGTPYSDEEIAKAPEALANKSELDAVVAYLQGLGLALKNVR"
     gene            18761..18931
                     /locus_tag="ACJJDE_000465"
     CDS             18761..18931
                     /locus_tag="ACJJDE_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcoQ/FixQ family Cbb3-type cytochrome c oxidase
                     assembly chaperone"
                     /protein_id="HGG7540453.1"
                     /translation="MDINGIRALFTVWIFICFLLVLYIVFNRRNKKNYDNAANSIFDE
                     NQDAQDKKSENR"
     gene            18955..19833
                     /gene="ccoP"
                     /locus_tag="ACJJDE_000466"
                     /pseudo
     CDS             18955..19833
                     /gene="ccoP"
                     /locus_tag="ACJJDE_000466"
                     /inference="COORDINATES: protein motif:HMM:TIGR00782.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome-c oxidase, cbb3-type subunit III"
     gene            19942..20290
                     /locus_tag="ACJJDE_000467"
                     /pseudo
     CDS             19942..20290
                     /locus_tag="ACJJDE_000467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c5 family protein"
     gene            20492..21901
                     /locus_tag="ACJJDE_000468"
     CDS             20492..21901
                     /locus_tag="ACJJDE_000468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY-associated TM helix domain-containing
                     protein"
                     /protein_id="HGG7540454.1"
                     /translation="MDTQIKTEADNQSNRRYLTVWRWHFYAGLLVMPFLTLLAVTGLG
                     MLLFANITGKEGERIHVVPQATVQPLSVQAEAARSAVNPETSSVVQYIAPRADDMVAV
                     FRVNNEGKATMVAVDPYTAKVVSTMPRNQGWYYAMDEIHSDMMLGSTGDYLLETAASL
                     TIIMIISGLYLWWVKRRGIKAMLLPPKGRARSWWRNLHGAFGTWVSLILLLFCLSGIA
                     WAGIWGGKFVQAWSQFPAGKWGVEPNPVSVVPTHGEVLNDGKVKEVPWVLELTPMPVS
                     GTTVGKDGINPDEPMTLETVDRFAREIGFKGRYQLNLPKGEDGVWTLSQDSMSYDMIS
                     PFADRTVHIDQYSGKILADIRFDDYNPFGKFMAASIALHMGTLGWWSVLANVLFCLAV
                     IFIGISGCVMWWKRRPTGAVGIVPPAQKVKLPVWWMMALPLLAIALLFPTALLAIAVI
                     WLLDTLLLSRIPVLRRWFK"
     gene            22003..25212
                     /gene="recC"
                     /locus_tag="ACJJDE_000469"
     CDS             22003..25212
                     /gene="recC"
                     /locus_tag="ACJJDE_000469"
                     /EC_number="3.1.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009338 - exodeoxyribonuclease V complex
                     [Evidence IEA];
                     GO_function: GO:0008854 - exodeoxyribonuclease V activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HGG7540455.1"
                     /translation="MFYLYQSNRLETLAALFARIQKVKPLKSVLQPEQIIVQSQGMRR
                     YLNTCLARDLGVAANLSFSLPAGLTWKLMKKLIPGIPELSPFAPEVMRWRLLDLFRSE
                     AFRNTAEFEDVRNVLQDYLGSGESADYQLAGQLADIFDQYLVYRPQWIDAWQQGRILS
                     LGDDEIWQSKLWRYLDDGRQSAPHRVALWEKLLESLSSDKLPERYFVFGISTMAPMYL
                     QLLHKLSEHCDVFVFALNPSGMYWGNVIEAAQILKGGGDPDLTQAGHPLLASLGKQGR
                     DFFDFLNEMEIEGETPVFEEGSRDTLLHALQTDIQNLDMPSEKAGNINTDDGSIRIVS
                     AHSPLRELQILKDKLLKILHEHPDWQPHDIAVLTPNIESYTPFIEAVFGQAQPGAQAL
                     PYSVSDVKISRRQPFFYTLECLSDLLESRFEVDKVLVLLETAPVLRRFGLTEDDLPLL
                     HDMVADLNVRWGLDGEMRGGTDQLFTWKQAVERMILGWMLPEGGNPMWQDVSAWYADV
                     NQTALFGRFAALLETLSDIVRIWQQPATVGEWVARCRDLLETLFQTEADDQKAVQNLE
                     NEWVKWQAETELAQFSGQLPPHTVIRHIRRFLDSESEAGFLRGGITFCSMVPMRSLPF
                     KVICLLGLNDGDFPRNTKAAVFDLIAKHPAKGDRARRDDDRYLFLEALISAREILYLS
                     YIGRDIRKDEELAPSSLLGELIDTVAAMAGIGSRQLAQNWIEQHPLQAFSRRYFQEGG
                     RSDGIFGTRTDYATALGQTPEPPQPFFDQPVENAEPVAEIGQDEFIRFWRNPVKVWLQ
                     QQLAWSEPHIGEAWEPAEPFEPQHADQIAEIYIEARREGQDFSQTAARIRAESLLPSG
                     ELGRLWQQDFQTAAKQIDTAVLNSPKLPPLPYAIPSDGQILKGSLGNLYRCGQVFYAY
                     GKPNAPQRIAFLLEHLIFCAVMPSEAEMRQTFIVQSGETEILAEIAQDRALQLLSEWM
                     AFFNIGQNRPLPFFAKTSLAAAEAFAQKQDWEAALKKAQTAYYGSKVSKGQKDYTEVA
                     LVFGNASQNPLEQPLFENLVRLLADTFAAAEKKEEAGAA"
     gene            complement(25282..26850)
                     /gene="mtrF"
                     /locus_tag="ACJJDE_000470"
     CDS             complement(25282..26850)
                     /gene="mtrF"
                     /locus_tag="ACJJDE_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041421321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbgT family antimetabolite efflux transporter
                     MtrF"
                     /protein_id="HGG7540456.1"
                     /translation="MSQTDTQRDGRFLRTVEWLGNMLPHPVTLFIIFIVLLLIASAAG
                     AYFGLSVPDPRPVGAKGRADDGLIHVVSLLDADGLIKILTHTVKNFTGFAPLGTVLVS
                     LLGVGIAEKSGLISALMRLLLTKSPRKLTTFMVVFTGILSNTASELGYVVLIPLSAII
                     FHSLGRHPLAGLAAAFAGVSGGYSANLFLGTIDPLLAGITQQAAQIIHPDYVVGPEAN
                     WFFMVASTFVIALIGYFVTEKIVEPQLGPYQSDLSQEEKDIRHSNEITPLEYKGLIWA
                     GVVFVALSALLAWSIVPADGILRHPETGLVSGSPFLKSIVVFIFLLFALPGIVYGRVT
                     RSLRGEQEVVNAMAESMSTLGLYLVIIFFAAQFVAFFNWTNIGQYIAVKGATFLKEVG
                     LGGSVLFIGFILICAFINLMIGSASAQWAVTAPIFVPMLMLAGYAPEVIQAAYRIGDS
                     VTNIITPMMSYFGLIMATVIKYKKDAGVGTLISMMLPYSAFFLIAWIALFCIWVFVLG
                     LPVGPGAPTFYPAP"
     gene            27182..27394
                     /locus_tag="ACJJDE_000471"
     CDS             27182..27394
                     /locus_tag="ACJJDE_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540457.1"
                     /translation="MKNEIQKIMDKYDPWHEDDFESYENIARDVSLMTDKTFIEHYLL
                     EVYSEENGHFDQENVHAMIEEIKNAI"
     gene            complement(27487..28119)
                     /gene="mtrR"
                     /locus_tag="ACJJDE_000472"
     CDS             complement(27487..28119)
                     /gene="mtrR"
                     /locus_tag="ACJJDE_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux system transcriptional
                     repressor MtrR"
                     /protein_id="HGG7540458.1"
                     /translation="MRKTKTEALKTKEHLMLAALETFYRKGIARTSLNEIAQAAGVTR
                     GALYWHFKNKEDLFDALFQRICDDIENCIAQDAEDAEGGSWAVFRHTLLHFFERLQSN
                     DIYYKFHNILFLKCEHTEQNAAVIAIARKHQAIWREKITAVLTEAVENQDLADDLDKE
                     TAVIFIKSTLDGLIWRWFSSCERFDLGKTAPRIIGIMMDNLENHPDLRRK"
BASE COUNT         7056 a         6551 c         7494 g         7205 t
ORIGIN      
        1 cgttaatttt tgttaatcgt cccttcttag ggacgcaata tataagggac gcaatatata
       61 agggacgcaa tatataaggt tttaaaacgc taagaacaaa atccgataac ggctctgaag
      121 aagtaagtct ttctttattg cacaagatag caaacttcca cggcattctc gccccacccg
      181 tgccgtccaa gcctttttca aagacataga tggttttctt ggcaatcact tcgtcagttt
      241 ggcggtcgat aatccgtatg gtcgcacctg ccacccagtg cctgcgcagc ttggaatcga
      301 cattgttttc gaacgttacc gcataacggg cggggtgtat atgattaagt atttgattta
      361 gcggaaaaat ctttacctga ataccgaata atatcggaat ggttgggttg caggacatcc
      421 acatagcggt attccccatc gctaaaaaat cctaggaaac gagcaataaa atttacgcct
      481 tcgctggtct gtaaagccgc attgtcccac atcgggtctc tggtttttgc atctgccgaa
      541 acggtacgct caggtactac cttcaacagc ataatccctt ccacattgtc cgccgtctgg
      601 taaatctttc ccccgccgtt ttgcattgtt cgttaaacac ggcttcggct tctttgtatt
      661 ttctgtccca ctcttcttgt gcctgtattt cttctttgat cgggccgaat tgtttgggaa
      721 taatccaaac aaacagcatc aggatagcgg cggcggtcag gctgcctgaa aggattttgc
      781 cggggttccg tttgggcttt ttataggcaa agcggacgag aaaccaaagc aacagcagca
      841 tggtgcccca atagccgatt gagaatagga tggccaaacc ttctaggaaa tggcgtaaat
      901 cgtttgtggt aaacatgggt tgttcctgtg gttaaatgtg caggctgctt tttgccgaac
      961 cttgccgcat ctcaaaagca gcctgcgctt cagcgttgcg ttacgcagta aaataatgaa
     1021 tatttgtaac gacttgggta ttttttgtca atattcccgc ctttccctta acagctgccg
     1081 cgctttccgt taaaattcct ttacatattt atattgtttc ctgtttctat attgccaagg
     1141 ttatacccgt tatgtttttc tccgccctga aatcctttct ttctcgatac attactgtat
     1201 ggcgcaatgt ttgggcggtg cgcgaccagt tgaaaccgcc caaacgcacg gcggaagaac
     1261 aggcgttttt gcccgcgcat ttggaactga ccgatacgcc ggtctctgcc gctccgaaat
     1321 gggcggcgcg ttttattatg gcgtttgcgc ttttggcttt gttgtggtcc tggttcggca
     1381 aaatcgatat tgtggcggcg gcttcgggca aaacggtgtc gggcgggcgc agcaaaacca
     1441 tccagccgct ggaaacggcg gtggttaagg cggtacatgt gcgcgacggg cagcatgtga
     1501 aacagggaga aacgctggcg gaactggagg ctgtgggaac agacagcgat gtggtgcagt
     1561 cggagcaggc tttgcaggct gcccaattgt ccaaactgcg ttatgaagcg gtattggcgg
     1621 cattggaaag ccgtaccgtg ccgcatatcg atatggcgca agcacggtct ttaggtctct
     1681 ccgatgccga tgtgcaatcg gtgcaggtgt tggcgcagca ccagtatcag gcatgggcgg
     1741 cgcaggatgc gcaattgcag tcggctttgc gcggccatca ggcggaattg cagtcggcca
     1801 aggcgcagga gcagaagctg gtttcggtgg gggcgatcga gcagcagaaa acagcagact
     1861 accgccgttt gcgggccgac aattttattt cggaacatgc gtttttggag cagcagagca
     1921 aatcggtcag caattggaac gatttggaaa gtacgcgcgg tcagatgagg cagattcagg
     1981 cggccattgc acaggcggag cagaatcggg tgctgaatac gcagaacctg aaacgcgata
     2041 cgctggatgc gctgcgccag gcaaacgaac agattgacca ataccgcggc caaacggata
     2101 aggcaaagca gcggcagcag ctgatgacaa tacagtcgcc tgcggacggc acggtgcagg
     2161 aattggctac ctatacggtg ggcggtgtgg tgcaggctgc ccaaaaaatg atggtgattg
     2221 cgcccgatga cgacaaaatg gacgtggaag ttttggtatt gaacaaagac atcggttttg
     2281 tggaacaggg acaggatgcg gtggtgaaga ttgagagctt tccctatacg cgctacggtt
     2341 atctgacggg caaggtgaaa agtgtcagcc atgatgcggt aagccacgaa cagttgggct
     2401 tggtttatac ggcggtggtg tcgctggaca aacatacctt gaatattgac ggcaaagcag
     2461 tgaatctgac ggcgggcatg aatgtcacgg cggagattaa aacgggtaaa cggcgggtgc
     2521 tggattatct gttaagcccg ctgcaaacca aattggacga aagctttagg gagcgatagg
     2581 cggatccgta ctgggcattt gttatccgcc ggttcggaca tgcagactgc ctgaaaccat
     2641 tgcccggatg acattgctca atctaatgat aatgcaagat tacggtattt ccgtttgcct
     2701 gacactgacg ccctatttgc aacatgaact attttcggct atgaaatcct atttttccaa
     2761 atatatccta cccgtttcac tttttacctt gccactatcc ctttccccat ccgtttcggc
     2821 ttttacgctg cctgaagcat ggcgggcggc gcagcaacat tcggctgatt ttcaagcgtc
     2881 ccattaccag cgtgatgcag tgcgcgcacg gcaacaacaa gccaaggccg cattccttcc
     2941 ccatgtatcc gccaatgcca gctaccagcg ccagccgcca tcgatttctt ccacccgcga
     3001 aacacaggga tggagcgtgc aggtgggaca aaccttattt gacgctgcca aatttgcaca
     3061 ataccgccaa agcaggttcg atacgcaggc tgcagaacag cgtttcgatg cggcacgcga
     3121 agaattgctg ttgaaagttg ccgaaagtta tttcaacgtt ttactcagcc gagacaccgt
     3181 tgccgcccat gcggcggaaa aagaggctta tgcccagcag gtaaggcagg cgcaggcttt
     3241 attcaataaa ggtgctgcca ccgcgctgga tattcacgaa gccaaagccg gttacgacaa
     3301 tgccctggcc caagaaatcg ccgtattggc tgagaaacaa acctatgaaa accagttgaa
     3361 cgactacacc gacctggata gcaaacaaat cgaggccata gataccgcca acctgttggc
     3421 acgctatctg cccaagctgg aacgttacag tctggatgaa tggcagcgca ttgccttatc
     3481 caacaatcat gaataccgga tgcagcagct tgccctgcaa agcagcggac aggcgcttcg
     3541 ggcagcacag aacagccgct atcccaccgt ttctgcccat gtcggctatc agaataacct
     3601 ctacacttca tctgcgcaga ataatgacta ccactatcgg ggcaaaggga tgagcgtcgg
     3661 cgtacagttg aatttgccgc tttataccgg cggagaattg tcgggcaaaa tccatgaagc
     3721 cgaagcgcaa tacggggccg ccgaagcaca gctgaccgca accgagcggc acatcaaact
     3781 cgccgtacgc caggcttata ccgaaagcgg tgcggcgcgt taccaaatca tggcgcaaga
     3841 acgggttttg gaaagcagcc gtttgaaact gaaatcgacc gaaaccggcc aacaatacgg
     3901 catccgcaac cggctggaag taatacgggc gcggcaggaa gtcgcccaag cagaacagaa
     3961 actggctcaa gcacggtata aattcatgct ggcttatttg cgcttggtga aagagagcgg
     4021 gttagggttg gaaacggtat ttgcggaata aagcaggctg aaacggttat gaaattccca
     4081 aagcagcctg caccccgttt cgaaagtgca ggctgctttg ggattgatcc gatactttca
     4141 cattctcatt gcctttaaat aaagcacagt taaaaacaca tttaaattaa gtgcgaatta
     4201 attcaaatgt atattcaatt aaaatcaaaa taggacagta gtgcatcgtc aaatcgggcg
     4261 taatcagaca aaacggttcg cagataccgc ttaatattcg cccacacttt ctcaatcggg
     4321 ttgagctcag gtgaataagg tgcaagaggc aataccttat gtcccaattt ttccgccatt
     4381 tcccgtaaga cacccatacg gtgaaatcgc gcattatcta aaataatcac cgatttttga
     4441 gtcaatgcgg gcagtaggca ttgctgaaac cacgcttcaa aaaagactcc ggtcatcgta
     4501 ttttgataaa ccatcggagc aatcagccgg ttgccgactt gtgcggacac cagagataag
     4561 cgtcggtatc tttttccact tatctgcgct ttcactattt gccctttcag gctgcgggca
     4621 tagggacgga acaggtggcg gtcaaatcct gtttcatcca aataaacgcg ttggtagtca
     4681 gaaaattcgg ccggctgtgt caaataatgc gttactttgg ccgggtcttg ttctttgtaa
     4741 gtggtggtct ttttttgcgc gttatcccca tctgtttgag tgcatagcaa acggtggctg
     4801 ccgtacaatc aaaatgtttg gcgatttcat gcagataggc atcctggtgt tgcccaacat
     4861 attgagccgg tttttgccta tccgatttga cggcatttag accggtaact tgatgtttta
     4921 ggctgcctgt ttgtttttta aggcgaatcc acaggtaaag tgtgtttctt gacaagttaa
     4981 acgttgctgc ggtttggctg atgtttttgc attgttcgta atatcgtgga ttaacaaaaa
     5041 ccagtacggt gttgcctcgc cttgccgtac tatttgtact gtctgcggct tcgtcgcctt
     5101 gtcctgattt ttgttaatcc actatagttt aaagctttgt ttcttaagtc cgcagagtat
     5161 gccatggtta gaccttcaaa gttgagtatt gtactatttt gtttttaatt gactatgcaa
     5221 caaaaaatag caaaccccgg caatcaaaat gccgtctgaa gcgttattcg gctttcagac
     5281 ggcatttttg tatttaaagc cgggtaacgc tcaatacgcc tttgacgtcg ccgaggctgg
     5341 cgaggacgcg cgggaggtcg ttgacctgtt tgacttcgag cgtgaaccgc atactggctt
     5401 ccaagtcgcg ggactgggtt tgcacggcgg taacgttgag tttgtggcgg gcgagcgcgt
     5461 cggatacgtc gcgcaaaagc ccggagcggt cttgggcgcg gatttcgata tcgacggcaa
     5521 acacttgtcc ttcctgcaac gccgcccaac ttgcgtccag tactttttcg ggcgcgtgtt
     5581 cggcgaggtg tcggaaagag gggcaggttt tgcggtgtac cgaaatgccg cgatcgcggg
     5641 taacgaagcc gacaatgtcg tcgggcggcg cgggtttgca gcatttggca agcgtggtca
     5701 tcagaccgtc ttcgccgtcg atgagcacgc cgtttttgcc gccttttttg attttggact
     5761 gtttgacgat ggtggtttcg ctgacgggta cgggcggcgg ttcgttcagc gtgccgcagg
     5821 ctttttggat ggcgcggttg gaaatttcgc cttgtccgac ggcggtgtag aggtcttctg
     5881 gctttttgta gccgagattt tcggcaagct cttgcaggtt gggtttgggc gtgagtttgg
     5941 caagctgttt gtcgagttgg acgcggcctt cttcgcgcac ggtgtcggcg ttttgctggc
     6001 ggatgtaggc gcggattttg ccgattgcct tgttggattt gacccagcct tcgtaaagcc
     6061 agttgacgga aggatgccct tctttggcgg taatgatttc gacacgctgt ccgttttcga
     6121 gcggggtgga cagcggcaca atctgccctt cgactttcgc accgcggcaa cggtcgccga
     6181 tgctgctgtg cagggcgtag gcgaagtcga tgggggtcgc gcctgtgggc agggagagga
     6241 ctttgccgtg cggggtcaaa acataaatcg tgtcgttgaa aagctcggtt ttgaaggcgg
     6301 cggcgaggtc ttccttgccg ctttccgcca tgttttcgcg ccagtccaaa agttggcgta
     6361 accaggcgat tttttgttcg taggcggaat cgcctttgcc gccctctttg taacgccagt
     6421 gcgcggcgac accgaattcg ttgaattggt gcatatcgaa ggtgcggatt tgcacttcca
     6481 cgcctttgtc ttccgggccg acgatgacgg tgtgcaaact tttatagccg ttgcctttcg
     6541 ggttggcgat gtagtcgtcg aactcgccgg gaatgggctg ccagaggctg tggacaatgc
     6601 ccagtgtggt gtaacactcg gggacggtat caaccagaat ccgcacggcg cggatgtcga
     6661 acaacccgtc gaagctgagt tttttcttca ccattttttt gtaaatggag tagatgtgtt
     6721 tcggacggcc ggcgacttca aagtggatat tgtatttttt gagttccgta cgcaggatat
     6781 taaggaagtt ttcgatgtat tcgaggcgtt cggtacgttt ttcgtccaaa agcagggcaa
     6841 tttcgcggta tttttcgggc tcttgatggc ggaagcccaa atcttcgagc tgccatttga
     6901 gctgccacac gcccaaacgg ttggcgagcg gggcgaagat gtcgagggtt tctttggcga
     6961 cggcgcgttt ttcggggctg tcgggggcgt tgcttaaaaa ttgcagggtg cgcgtacgca
     7021 tcgccagttt gattaacacg acgcggatgt cggtaaccat cgccagcagc attttccgca
     7081 tagtttctgc ctgctgggcg cgttcttccg gtgtggcgag gctgtccacc cgggcgaagt
     7141 gggtgagttt ctgcacttcg tccacacctt tgaccagctc ggcgacggta ctgttgcagc
     7201 gttcggaaac caataggttc cagtcgggga cgtagcgtcc gatgtcggca agcagggtgg
     7261 cggcgacggc atcggggagc aggtcgagtt catgaaccat ttgcgccgcg ccgaggaagt
     7321 ggtcgggcag cggctcgcca tacggcgtgg cggcatcggc ggggtaatgt gcttccgcca
     7381 gcgaacgggc ggctaagaca agttttttat cgttgttcgg cagcgcggcg cagtagctgt
     7441 cgaaccattc gcgcaattct tgcagagtcg cgctttgcgt gtcttgaatc gggctgatgg
     7501 cggtcatgat ggggtcttcc gttccgataa aaacgagttt attgtaacag cttgagacct
     7561 ttgcaataac ataggttact aaaattttat gctcaatctc attttcaaaa tgcaaaactt
     7621 ttctgatttt tcctgctttt tgctcaatat taggaaggtt ttaggcaatt gaaaattttt
     7681 tggcgcattt ttatgcgtca aatttcgtta acagactatt tttgcaaagg tctcagctta
     7741 tttatttacg gtgcataggc gggaagataa acttgtttcg ggtggcgcgg ggtgttaagg
     7801 tagccggtac cgacaggttg acgaggaata ttttgatgaa actgtatatt tacgaccatt
     7861 gcccgttttg cgtgcgtgcg cggatggctg ccgggctgtt tggcgcggac gttgaagaag
     7921 ccgtgctggc aaacgacgac gaggcaacgc cgatcggtat gatcggtgcg aaacaagtgc
     7981 ccgtcctgca aaaagaagac ggttcgttta tgggcgagag tttggacatt gtgcggcatt
     8041 tcgaccgcga agaccgtctg aaagacgaag tccgccccga gatacgggcg tggctggaca
     8101 aggtgggcgg atacaacgac aaactggtgc agccgcgcgt gatcaaaatc gggctgcctg
     8161 aatttgcaac gccggaagcg gtgaaatatt ttacagacaa aaaagagaaa agcatcggca
     8221 gcttttccgc caatttgaat aaaaccgccc aatacctcga acggataaac gcagatttgc
     8281 aagagttgga aaatttgatg gacggtgctt cagacggcat caacggcgga atcggtatgg
     8341 aggatatttt ggttttcccc gttttgagga atctgaccgt ggtgcgcggc atcgcgttcc
     8401 ctcggaagac gatggattat ttaatcggta tgagtgaaaa atcgggcgtg ccactttatt
     8461 tcgacagggc attgtaaaag tggctgttat taactgacag atgaaggagg ttctacccta
     8521 tttgaggtaa actctattta ccattggccg aaataccagt gcttatctcc aagacgacct
     8581 tcccaatccc ttttgcctct taaaaagaag tgactagtgt gtaaagttat agttcctttt
     8641 atagctttcc aataaaatta aagtatttaa aagcttgttt agttctaatt tgttaatttc
     8701 tgtatctaaa taatgttcag aatagtatta ttttttaaat aaaccatgaa tagtacttca
     8761 cattgtttgt cgtattattt agcttttaaa tttctaatgt gaaagatagt ttaatggacg
     8821 cctttgattt ttttatgcaa ggcaatttta aaaaaattgc aactgaacaa ggtttagacc
     8881 gtaaatattt tatattccac tatatcgtat gtaatttatc tgccatttct tctttttgtt
     8941 taatgaaggt tatccatagt tatactatcc tttgtttatt aataatgata attggcattg
     9001 catttggatt tatcttgaga aatagggttc tatctatagt aaaaaataaa caaaattttt
     9061 tatctgatat gtttcccttg gaaatgcctt tcttttctag agtatacaaa atacctatct
     9121 tggccagatt cttgaatagg ggaatgaaat ggctttatct ccaaaatttt ttctgtttag
     9181 ttatgatttg tttctcgata tctcttatcc ttaatgaaga aagggggtgg atgccttatt
     9241 ttgcctgcta ttggtttgga ctttgttatc cagtaagcac ttattacgtt tttttatcca
     9301 gagattataa acatatctaa actattatgc gtggcggtac ttccaaaggt aaattttaac
     9361 ctaatcaatt tactcaaacc atccaaaaat taccaagcag caatataaac acagatttat
     9421 ttgagccaac ctgatcaaaa caaggaacta aatagatgaa aaagaccatt tttaacatta
     9481 ccaaaatgga ctgcccgtcc gaagaacagc tcattcgcat gcgtttaaaa gatgtgtctg
     9541 atatttatga attacagttt gatattgctg ggcggtgctt aaccgtctat cacgataatc
     9601 aagatacaac gattttacaa gtacttgaac cgcttaattt tgatagtcat atcatttcca
     9661 ccgaagtgat tgttgataag atagtgttta acaagcctga tgagcactta gaaaaaagat
     9721 tattatatca agtgctcatg attaactttg tgttttttat catagagtgt tcggttggta
     9781 tttttgctaa ttctatgggg ctgattgctg atagtctaga tatgctggcg gacagctttg
     9841 tctatatatt ggcgctatca gccattggta tgacgctggc gtataaaaaa cgtgtggcat
     9901 ttttggcggg gataacgcag ataatattgg cgttatttgg ggtgatagaa gtgattaggc
     9961 gttttatcgg tgctgagcag ctgcccaatt atcaactgat gattggcacg gcatttttgg
    10021 cattgattgc aaactggctg tgcttatatc tactgagcaa aaatcaaaat aaagaaatcc
    10081 atatcaaagc cagcatgatt tttacatcca atgacattat catcaatatc ggtgtgatag
    10141 cggcgggagc attgacgtta ttgactcatt ctagctatcc tgatttaatc attggcatga
    10201 ttgtctttgt cattgtacta tttggtgcca gaaatatttt aaaattggca aaataattcc
    10261 tttcaccagc aaaggagttt ttatgcaaat atcggtcaaa gctacctaca tacgtggcag
    10321 tacttccaaa aacttgattt tttaaaatgt ggttaatgcg agtttgttta tctggtattt
    10381 gattggccaa gccttcatcc aagcgtttga cgatttcacg caaaaatacc cctgatttac
    10441 acacagggtc taagaatgtc gcctttggat ttgaccaaat ctcagacggc aataaatcca
    10501 gcatttgatt ggcaagtttt ggcgatgtga aaacctcatc attagacaga ctggagtttc
    10561 ttaatcagtg tttcagttaa tgaaaggtat tatcatgcaa cttggttcta ataatgatga
    10621 aaaaaataag attacactac aggaaaacgc ggcagggcaa tatgtcctgc cgcgttttct
    10681 ggagcgttta tgccgtctga aagccagtca gacgaacatc tgcacaaacg caatcaccag
    10741 ccgcacaatc ggtgcaataa acgcacccaa aaccccggtc agcataagca gcaggataat
    10801 ccacgtccca taaggttcga ttttgcggaa cgcttgcgaa tatttcgccg acaggaaggt
    10861 gtcgatgaaa atgccgccgt cccaaggcag gatggggatg atgttgagcg cgaacagaat
    10921 cgcattgatc agaataccgt agtttgccat ttgagccaac ggcatctgat acgccccacc
    10981 gacatacgga gtcagcacca aaaccacgcc ccacagaaca gccatcgcca gattcgacag
    11041 cgggccggac gcggcaacgc aacgccaggc aaggcgcggg ttgcggaagt tgcgcgaatc
    11101 gataggaatc ggacgcgccc agccgaacag gaagggcgta aacatcaaag taagcagcgg
    11161 tacgatgatt gtgccgacca aatcgatatg gggcaggggg ttcagtgtca gcctgccgta
    11221 ttgttcggca gtgttgtctc cccagtagcg cgccgtatag ccgcgcgcca cctccctgac
    11281 ggtaatggcg agcagcacgg gcaggacggc aagcagaaac acgcccaaat caaaattttg
    11341 aaacatggtt ttcctttgaa cagatgtggt gtgcagcccg aaacggctga cagacagaag
    11401 cggcaatata tcatctaacc tgattttatt ggaataagaa atcagacgga atcatttttt
    11461 ctgccggccc gttatctgat gatttgctgt aatacagcgt ttaaacacgg tttgcctgtg
    11521 aacggaacag acattcatat gaccaaaaat tgtaaaaata ggttgcaaat aggaattgtt
    11581 gctattatta tgcccgaatt atggataaag aacgaatttt aacccccgca gtcgtgtttt
    11641 ccgtcgcact gctgcatttg gcaatggtgg cattgctctg gcaggcgcac aagctgcccg
    11701 tgatagagtc aggaaatgtt atcgaatttg tcgatttggg tgattttggc ggaggggacg
    11761 gtgcacccga aggcgcaggt gcgcctgctg cgcctgagcc gcaacctgag cctgagccgc
    11821 ccaaacctgt cgagccgccc aagccggttt tgaagccggt ggttacgaaa aaggcggatg
    11881 cggatattca gcagcctaag gaagagccga aacctgaaga aaagccgaaa cccgaagaaa
    11941 aaccgaaacc agagcctaag ccggaagcga agcctgtccc gaaaccggcg gaaaaaccgg
    12001 tcgagaggcc gtctgaaaaa cctgccgaac atcccagcaa tgcttctgcc aaagcagaca
    12061 gcgagcaggg taatggggaa gataagggaa ccggtaccaa aggagacgga acggggcgcg
    12121 gagaaggcag cggtaaaggt agcggcggtg tcaaaggcga acacggggaa ggagccggca
    12181 gcagcaaagg caatccttta cgcgccaatg gcagcattcc gcgcccggct tatcccacgc
    12241 tttctatgga gaatgacgag cagggtacgg ttgttttgag cgttttggtt tctccgggcg
    12301 gtcatgtcga gtccgttaaa atcgtgaaaa gcagtggttt ttctcggttg gacaatgcgg
    12361 cacgcaaggc ggcgcaaaac gggcattttc aagccaatgc ctggacggag tttaaagtcc
    12421 ccgtcaagtt tgaattgaat taggcggttg ccgcagcggt ttgcggcagc ttggatgttt
    12481 gattggtttt ttcagtgttg gaatcattat gaatttgaaa ttagtatttg aatcgggcga
    12541 tcccgtcctg atcggtgtgt ttgtgttgat gctgttgatg agtatcgtaa cgtggtgttt
    12601 ggttgtcttg cgctgcatca agctgtatcg ggcgcgcaaa gggaatgccg ccgtcaaacg
    12661 gcatatgcgc gatactttgt cgctgaacga cgcggtcgaa aaagtgcgcg ccgtcgatgc
    12721 gcctttgtcc aaactggcgc aagaggcatt gcagtcttac cgcaactacc gccgaaacga
    12781 agcgtccgaa ctggcgcagg ctttgccgtt gaacgagtat ttggtcattc aaatccgcaa
    12841 cagtatggcg cagattatgc gccggtttga ttacgggatg accgcgcttg cctccatcgg
    12901 cgcgaccgcg ccgtttatcg ggctgttcgg cacggtttgg gggatttacc acgccctgat
    12961 caatatcggg caaagcgggc agatgagtat tgcggcggtt gccggcccga ttggcgaggc
    13021 actggtggcg acggcggcgg gtttgttcgt ggcgattccg gcggtgttgg catacaactt
    13081 cctcaatcgc ggcacaaaaa tactgaccca ggatttggat gcgatggcgc acgatttgca
    13141 cgtccgcctg cttaatcaaa aggatagctg attataaaag gatagctgat tatggcattt
    13201 ggttcgatga attccggcga cgattctccg atgtccgaca tcaacgttac gccgttggtg
    13261 gacgtgatgc tggtgttgct gattgtgttt atgattacta tgccggtgct gacgcattcc
    13321 atccctttgg aactgccgac cgcgtccgag cagacaaaca agcaggacaa acagcctaaa
    13381 gaccccctgc gcctgacgat tgatgcgaac ggcggctatt atgtcggcgg ggattctgca
    13441 agcaaagtgg aaatcgggga agtggaaagc cgtctgaaag ccgccaagga gcagaatgaa
    13501 aacgtgattg tggcgattgc ggcagacaag gcggtggaat acgattatgt aaacaaagct
    13561 ttagaagccg cccgtcaggc aggaatcacc aaaatcggtt ttgtaaccga aaccaaggcg
    13621 caataaagtt cgacgcttga acgaatgccg tctgaaagtc tttcagacgg catttcttat
    13681 gtttaatcag ctatatatag ttgattaaaa caaaaatgag acgacagagc gccgtctcca
    13741 tttctgcgca ggcgggaata caaacatctg atttttcttt tattttcaaa cattactgaa
    13801 atgggtaagt ctggagtcct gcctgcgcga gaataatgaa aatgtgcatt tctaattttt
    13861 atagtggatt aacaaaaatc aggacaaggc aacgaagccg tagacagtac aaatagtacg
    13921 gaaccgattc acttggtgct tcagcacctt agagaatcgt tctctttgag ttaaggcgag
    13981 gcaacgccgt actggttttt gttaatccgc tatacccact gtaaaaacgg agaaggacag
    14041 aggacggcag taaggtttgc cgtcctcttt ttcaagttgc ggtggaatgc cgcttgaagg
    14101 tgttttcggc ttgtaatcag acgcgggcgt tgtccagccg ctctctgaaa ttttccaaat
    14161 ttacgcctgc cgcttgggcg cggcggatga tttcgtcaac cggcatacct tctgccgccc
    14221 ggcggaagcc ccacaggagg gagcagcgcg taccggtccg gcaataggca aggacgggat
    14281 attcggcttg tccgatgagt tggcggaagg tttcgacatc gtgtttttgg atgtcgcgtg
    14341 cggtaacggg ttggtgatgg aatccagtaa cgcctgcttg ttccagccac tgtttgattt
    14401 gggcgaagtc gggttgcgat tcttcttcgc ggtcggggcg gttgcagatg acggttttga
    14461 tgcccagttg cgcgatttgt tccgcatcgg ctttggtcag ttgcggagaa atatagaggt
    14521 gttcgtcaag tttcagaatg gccattttgt ttcctttact ttgcggttgt ttttcagacg
    14581 gcattttgtg tgcaatgccg tctgaaagtt taaccgaaca accagttgtc caacaggttc
    14641 cggtctgtga tatgtaggat ggcagtatcc gctgccgctg cctgaaccgt caagacggtt
    14701 tgacgcaata tgccggcacg gaagaagtgg atattgattt ttgcattgac gtggtatcgg
    14761 gcccattgtg cggtaaagtc ggtgcaggca taaccgtcta aagcaatgat tttgtcttgc
    14821 ggacacagtg ccgcagattc cgcgctgccg ccgttgaaga catgggtcag gacgatgtgg
    14881 tcggcgtttt gtttgaaacg tgcgccaaaa tcgcctgccg acgggacggg gcagatgtgt
    14941 tctgcgtatc cgccgccgtg ttgtcgggga agcggcagga aggtcagtcc cacgcctgcg
    15001 gttgccaggc attcggcaag cggcaaattt tcggtactgt ataacgcttt ttggaaaaaa
    15061 tcttccaaat ccaagccggt aatttcctga cagcggattt gccagtgttt ttccggaata
    15121 cccgagtgtg tgtccctcca ctcccgatag agtttgtcca ttatcgtatc gagagaatgt
    15181 ctgccgttgc ttcggttgcg tattatcaga tcaaggcaca atgcggcaag cgcgcctttc
    15241 tggtagtagc tgacgatggc gttggggctg ttttcatcag gtttgtaaaa tttgttccac
    15301 gcggtaaaac tcgattccgc caaggtctgc ctcaaacggc cgcgggtttg ttgtacgcgc
    15361 gtaatgcctt gtgccagcag gtttaaataa gattcgggcg agatggtgcg gctgcgtgcc
    15421 aaaaacaaat cgtcgtaata ggatgtaatg ccttcgaatg cccatagttg ttcggtatag
    15481 ttttctttgt cgaggtcata aggggcgaac gcggcaggtt tgatggattt gacgttccac
    15541 gcgtgaaaat attcgtggga gaaaagtccg agcaatgtgg tgtaggcatc gtcggcatcg
    15601 gtcataccga acggcggaag gctgtggcgg tcggcgagca gggcggtgct gtcggcgtgt
    15661 tccaaaccgc cgtaaatatg gtcgccgacg tggagcagga acaaatattt ttgaaacggg
    15721 gcaggggagg aaaacaccgc cagttctgtt tcgcagattt ttttgatatc cgaaaccagc
    15781 ctgttgcggt cgaaatcggg atagatgccg cttaaggcaa ttgtgtgcgg aatgcctgcc
    15841 gcctcaaaat ctaaaaattc aatcaagccc atctcgacag gtcggtcaat caattcggca
    15901 taagatgccg cctgaaagac aaacctccct gtttccggca gcgttgtggc aatacgccat
    15961 tcggacggaa tacccgtcaa ttccaagcgg tgcggcagcg tttccgttcc ttcgactttc
    16021 aaaaacaggc acgatccgtc aaaaaaaccg cgttctgtcg tcaggaaaga acctcgaacc
    16081 gacaaatcga atgcatatac ggtgtagcgg atttgccact cgccgcgtac ggcggcagcg
    16141 tgccagcggt tttttgcaat ttgttcgagc ggcatggacg tgccgttaca ggatgcatgg
    16201 atagaagtga tgtggcggga aaaatcccga atcagatagc tgcccggaac ccagtttggc
    16261 aggcttattt ctataggaag atcatcatct tgtgtgaatg tcagcaggat gtgccactcg
    16321 tggtcgagag gggacggggt tattttataa tgaatcataa ctatcaaata tatcgttaaa
    16381 cgggatggat taaatacctt taaaatgcag cttaacctac atcaataaag tgccacaaaa
    16441 agggaaaatt ggaaacaaaa gcaatggcgg tcgggttgta atttattata acaatatgat
    16501 ttatatgtaa taaaaaacag attaagcaaa gggctcgccg gcggcgcgaa tgtaattccg
    16561 cttggcgtaa taaggcagat atgttaaatt tagaaaaaat tacgcttgcc cggattgcac
    16621 cttaaacagg ctgcggaagc ggcaggataa aaatctttat tcccataaat tcatggagac
    16681 tctcatggac acacaaactt acaactacaa agtggtgcgc cagttcgcca tcatgactgt
    16741 agtttggggg attgtgggta tgttggtcgg cgttatcgtc gccgcccagc tttttgctcc
    16801 tgcccttgac ttgtctaata tcggaccttg gttccacttc ggccgcctgc gtccgctgca
    16861 caccaatgcg gttattttcg catttggcgg ttgcggcctg atcggcacat catactacgt
    16921 tgtccaacgt acttgtaata cccgtctttt cggcggttgg ctgccggcat ttaccttttg
    16981 gggctggcag gcggtaatcg ttgccgccgt cgtcagcttc cctatgggtt ggacccaagg
    17041 taaggaatat gccgaactgg aatggccgat cgatattctg attactttgg tttgggtggc
    17101 ttacgccatc gtattcttcg gtacgattgc caaacgtaag attaaacata tttacgttgc
    17161 caactggttc tacggcggct ttattttggc ggtcgcactt ttacacatcg tcaacaatat
    17221 cagcatcccg gcagggttga tgaagtcata ccccgtctat tccggtgcga ttgatgctat
    17281 ggttcaatgg tggtacgggc ataacgccgt gggcttcttc ctgactgccg gcttcttggg
    17341 tatgatgtac tatttcgtac ccaaacaagc agcccgcccc gtttactcct accgcctgtc
    17401 cgtcgttcac ttctgggcgt tgatttttac ctatatgtgg gcgggtccgc accatcttca
    17461 ctacactgcg ctgcctgact ggacgcaatc tttgggtatg gttctgtctt tgattctgtt
    17521 cgcaccctct tggggcggta tgattaacgg catcatgacc ttgtccggcg cgtgggacaa
    17581 actgcgtaca gacccgattc ttaaattcct gattgtatcc ttgtccttct acggtatgtc
    17641 tacctttgaa ggcccgatga tgtcgattaa aacggtcaat gcattgagcc actatacgga
    17701 ctggaccgtc gcgcacgttc atgcgggtgc gttgggctgg gtaggctttg taaccatcgg
    17761 ttccgtctat tacatgattc cccgtctgtt cggcaaagaa cagatgcaca gcaccaagct
    17821 ggtagaagca catttttgga ttgcgaccat cggcgtggtt ctgtatatcg ctgccatgtg
    17881 gattgccggt gtgatgcagg gtttgatgtg gagttctttg aacgatgacg gtacgctgac
    17941 ctactcgttt gtcgaatccg taaaacgcac catgccttac tacgtgatcc gttttgcagg
    18001 tggtttattg tatctgagtg gtatgtgcat tatggcgtac aacgtgtacc gcacagccat
    18061 cggtggtaaa gcagtcgatg ccgaaatccc tgcggtttcc caaacacagc accactaaaa
    18121 tactaagaaa gataggctac caaaatgaaa ttacaacaat tggctgaaga aaaaatcggc
    18181 gttctgattg tgttcacgct gcttgtagtc agtgtcggtc tgttgattga agttgtgccc
    18241 ttggccttta ccaaggcggc aacacagccg gcgccgggcg tgaagcctta caatgccttg
    18301 caggttgccg gacgcgatat ttacatccgt gagggctgtt acaactgcca ctctcaaatg
    18361 attcgtccgt tccgtgcgga aaccgagcgt tacggtcatt actctgttgc cggagagtcg
    18421 gtttacgacc atccgttcca atggggttcc aaacgtaccg gtcctgattt ggcacgtgtg
    18481 ggcggtcgct attccgacga atggcaccgt atccacctgc tgaatccccg tgatgtcgtg
    18541 cctgagtcca atatgccggc attcccgtgg cttgcacgca ataaagtcga tgtcgatgca
    18601 accgttgcca acatgaaggc tttgcgtaaa gtaggtactc cttacagtga tgaggaaatt
    18661 gcgaaagcac ctgaggcttt ggcaaacaaa tccgagctgg atgctgtagt cgcctatctg
    18721 caaggattgg gtctggcttt gaaaaacgta aggtaacatc atggatatta acggtattcg
    18781 tgctctcttc acggtatgga tctttatctg tttcctgttg gtactctata tcgtcttcaa
    18841 caggcggaat aagaaaaact acgataatgc cgcaaacagc atttttgatg aaaaccaaga
    18901 tgcgcaagat aagaaaagcg aaaaccgtta atattgtgat aacggagcaa aacaatgaac
    18961 acaacatccc aatttactag taatttctgg aatatatata ttgcagttat tgtcttactg
    19021 agctttatcg ctttggcttg gctgctgctg tctcaaaatg ttgtcaaacg tccgaagaag
    19081 ggcgaagaag tacaaactac gggtcatgag tgggacggca ttgccgaata cgacaatccg
    19141 ctgccccgct ggtggttttg gctgtgtgtt ttgacgtggc tgttcggtat cggttatttg
    19201 gttatgtatc cgggtgtcgg cgactacaaa ggtctgctga aatggaccag ccataaccaa
    19261 tatgaaaaag aggtcaaaaa agccgatgag caatacggca aactgtatgc caagtttgcg
    19321 gatatgccga ttgaaaaagt ggcaaaagac cctcaagcca agcaaatcgc ccaaaacctg
    19381 tttaacactt attgtatcca gtgccacggc tctgatgcta aaggctctaa aggttttccg
    19441 aatctgaccg atagcgattg gttgtggggc ggtgatcccg ataaaattca cgagaccatc
    19501 gaaaaaggcc gtgttgcgac tatgcctgcc tggggccctg ctttgggcga agaaggcgtg
    19561 aaagacgttg cccattatgt gatgtccctt tcaaaacccg aaggtcagta tgatgaggaa
    19621 cgtgccgcgc gcggacaagc cttgttcagc ggtccgcctg ccaactgttt cacttgccac
    19681 ggcgataagg gacaaggtat ccaaggtttg ggtccgaacc tgactgatga cgtgtggttg
    19741 tggggcggta cgcaaaaatc cattatcgaa accattacca acggtcgcag cagccaaatg
    19801 cccgcttggg gacatttctt ggataaagac aaactgcata ttatgactgc ttatgtatgg
    19861 ggtctttccg ataaagacgg taaagctctg gtgaaaaaag ccgagcctgc accgactccc
    19921 gcaccggcgg cagaacccgc agcctctgct cctgcagaag cagcacaagc cgcgtccgaa
    19981 gccaaacctg ccgcagcaga acctaaagcc gaggaaaaag ccgcacctgc tgccaaagcg
    20041 gacggcaaat aggtttatga aaccgtttgt gccgcctgcc atggcaatgc ggttccgggt
    20101 attccccatg taggcatcaa agccgattgg gccgaccgca tcaaaaaagg caaggacacg
    20161 ttcgttgcac aaacacgcga tcgaaggttt caatacgatg cccgcaaaag gcggtcgcgg
    20221 cgatttgagc gatgatgaag tgaaagctgc ggttgactat atggtcaacc agtcaggcgg
    20281 caaattctaa cttgactgag tttccgatat tatcggttat gaaaatccag attcagtatt
    20341 gaatctggat tttttgtttt aacgggcatc cggttttaaa cgcagactgc ctatttgttg
    20401 taatgaattt tgactttagt cataaagaat tagtctttat tgtttataat cgcgcatcat
    20461 cacgatagcc ctattttcaa aaggacgatt aatggataca caaatcaaaa ctgaagccga
    20521 caatcagagc aaccggcgtt atctgaccgt ttggcggtgg catttttatg ccggtctgct
    20581 ggttatgcct tttcttaccc tgcttgccgt tacgggtttg ggtatgctgc tgtttgccaa
    20641 tattaccggt aaggagggcg agcggattca tgttgtgccg caggcaacgg tacaacctct
    20701 gtctgttcag gcggaagcgg cacgcagtgc cgttaatccg gaaacttcgt ccgtcgttca
    20761 gtatattgcg ccgcgtgccg atgatatggt tgccgtgttc cgtgtcaaca atgagggcaa
    20821 ggcaacgatg gtcgcggtcg atccttatac ggcaaaagtg gtcagtacca tgccgcgcaa
    20881 tcagggttgg tattacgcga tggatgaaat ccacagcgat atgatgctcg gttcgacagg
    20941 tgattatctt ttggaaacgg ctgcatcgct gacgattatc atgataatca gcggtttgta
    21001 cctttggtgg gtgaaacggc gcggcatcaa ggcgatgctg ctgccgccaa aaggcagggc
    21061 gcgttcttgg tggcggaatc tgcacggcgc gtttggaact tgggtgtcgt tgattttact
    21121 gttgttctgc ctgtcgggta ttgcttgggc aggtatttgg ggcggcaagt tcgtgcaggc
    21181 ttggagtcag ttcccggccg gcaaatgggg tgtcgaaccg aaccctgttt cagtcgtgcc
    21241 gacccacggc gaggtattga atgacggcaa ggttaaggaa gtgccgtggg ttttggagct
    21301 tacgcctatg cctgtttcag ggacgactgt gggcaaagac ggtattaacc ctgacgagcc
    21361 gatgacattg gaaaccgtcg accgttttgc gcgggaaatc ggtttcaaag ggcgttatca
    21421 gttgaatttg cccaaaggcg aggacggagt gtggactttg tcgcaggatt ctatgagtta
    21481 cgacatgatc agcccgtttg ccgaccgcac ggtgcatatc gaccagtaca gcggcaaaat
    21541 ccttgccgac atccgctttg acgattacaa cccgttcggc aaatttatgg cggcaagcat
    21601 tgcgctgcat atgggtactt tgggctggtg gagcgtgttg gcgaacgttt tgttctgcct
    21661 tgccgtcatt tttatcggta tcagcggctg cgtgatgtgg tggaaacgcc gtccgaccgg
    21721 agcggtgggc atcgttccgc cggcgcagaa agtcaagctg ccggtttggt ggatgatggc
    21781 attgccgcta ttggcaatcg cactgctctt cccgaccgca ctgcttgcca ttgccgtgat
    21841 ttggctgttg gataccttgc tgctgtcgcg gattcctgtt ttgaggagat ggtttaaatg
    21901 acccgatgcc gtctgaagcg ttcagacggc attttgtttg aaggcgggcg ggggaaaggc
    21961 tatataatcc cgaatacttg accacagctt ctgtttgaaa tcatgtttta tctgtatcaa
    22021 tccaaccgtc ttgaaacgct ggcggcactg tttgcccgca ttcaaaaagt caaaccgctg
    22081 aaatcggttt tacagcccga acagattatt gtgcagagtc aggggatgcg ccgctacctc
    22141 aatacctgcc tcgcccgcga tttgggcgtg gcggcgaatt tgtcgttcag cctgcccgcc
    22201 ggtctgacgt ggaagctgat gaaaaaactg attcccggta ttccggaact cagcccgttt
    22261 gcgcctgaag tgatgcgctg gcggctgttg gatttgttcc gcagcgaggc atttcggaat
    22321 acggcagaat ttgaagatgt gaggaatgtg ctgcaagact atctgggcag cggcgaatcg
    22381 gcggattatc agcttgctgg ccagcttgca gacatatttg accaatacct cgtgtatcgt
    22441 ccgcagtgga tagacgcgtg gcagcagggc aggatactca gtttgggcga cgatgaaatc
    22501 tggcagtcca aactgtggcg ttatcttgat gacggcaggc agagcgcgcc gcaccgtgtt
    22561 gcgttgtggg aaaagctgtt ggaatctttg agcagtgata agctgcccga gcgttatttc
    22621 gtgttcggca tttccacgat ggcgccgatg tatttgcagc ttttgcacaa gctgtccgaa
    22681 cattgcgatg tgttcgtgtt tgcactcaat ccgagtggga tgtattgggg caacgtcatc
    22741 gaagcggcgc aaatcctcaa aggcggcggc gatcccgatt taactcaggc agggcatccg
    22801 ctgctcgcct cattgggcaa gcaggggcgc gactttttcg actttttgaa cgaaatggaa
    22861 atagaaggag aaacgccggt gtttgaagaa ggcagccgcg atacgctttt gcacgccctg
    22921 caaaccgata tccaaaactt ggatatgccg tctgaaaaag cgggaaatat taatacggac
    22981 gacggatcga tacgcatcgt ctccgcacac agccctttgc gcgaattgca gatactcaaa
    23041 gacaaactgt tgaaaattct gcatgaacat cccgattggc agccgcatga tatagccgta
    23101 ttaaccccga acatcgaatc ctatacgcct tttatcgaag ccgtgttcgg acaggcgcag
    23161 cccggtgcgc aggcattgcc gtattccgtt tcagacgtga aaatcagccg ccgacaaccg
    23221 tttttttata cattggaatg cctgtccgac ttgttggaaa gccgatttga agtcgataaa
    23281 gtgcttgtgc ttttagaaac cgcacccgtg ttgcgccgtt tcggactgac tgaggacgat
    23341 ttgccgcttt tgcacgacat ggttgccgat ttgaacgtcc gctggggttt ggacggagaa
    23401 atgcgcggcg gcacggatca gctgtttacc tggaagcagg cggtagaacg catgatattg
    23461 ggctggatgc tgcccgaagg cggcaatccg atgtggcagg atgtcagcgc gtggtatgcc
    23521 gacgtgaacc aaaccgccct gttcggacgt tttgccgccc tcctcgaaac cctgtcggat
    23581 attgtacgga tatggcagca acctgcgacg gtcggcgaat gggtggcgcg ttgccgggat
    23641 ttgcttgaaa cattgttcca aaccgaagcc gatgaccaaa aggcagtcca aaacctcgaa
    23701 aacgaatggg tcaaatggca ggcggaaacc gaattggcgc aattttccgg acagttgccg
    23761 ccgcacaccg tcatccgcca catccgccgc tttctcgaca gcgaaagcga ggcaggcttt
    23821 ttacgcggcg gcatcacctt ttgcagtatg gtgccgatgc ggagcctgcc ctttaaagtc
    23881 atctgtctgt tgggtttgaa cgacggagat tttccccgca ataccaaagc cgccgtattc
    23941 gacctgattg ccaaacatcc cgccaaaggc gaccgcgccc gccgcgatga cgaccgctac
    24001 ctgttcctcg aagccctcat cagcgcgcgt gaaatcctct acctgtccta catcgggcgc
    24061 gacatccgca aagacgaaga gcttgccccg tcttccctgt tgggcgaact catcgatacc
    24121 gttgccgcta tggcgggcat cggtagtcgc caacttgcac aaaactggat agaacagcat
    24181 ccgctgcaag ccttttcacg ccgatatttc caagaaggcg gacgttcaga cggcatattc
    24241 ggcacgcgta ccgactacgc caccgcgctc ggacaaacgc ccgaaccgcc gcaacccttt
    24301 ttcgaccaac ccgtagaaaa cgccgaacct gttgccgaaa tcggacagga cgaatttatc
    24361 cgtttctggc gcaaccccgt caaagtatgg cttcagcagc agcttgcgtg gagcgaaccc
    24421 catatcggcg aagcctggga gcctgccgaa cccttcgagc cgcaacacgc cgatcaaatc
    24481 gccgaaatct atattgaggc gcgccgcgaa ggacaagatt tttcccaaac cgccgcccgc
    24541 atcagggcgg aaagcctgct gccgtcggga gagttgggca gactttggca gcaggacttc
    24601 caaaccgctg ccaaacaaat cgacacggcg gttttaaaca gtcccaaact tcctccgctg
    24661 ccctacgcca taccgtcgga cgggcaaatc ctgaaaggca gcttgggcaa tctgtaccgc
    24721 tgcggacaag tgttttacgc ctacggcaaa cccaacgcgc cgcaacgtat cgcttttttg
    24781 ttggaacacc tgatattttg cgccgttatg ccgtctgaag ccgaaatgcg gcaaaccttt
    24841 atcgtccaat ccggagaaac cgaaatattg gcggaaatcg cgcaagacag ggcattgcag
    24901 ctattgtcgg aatggatggc gtttttcaat atcgggcaaa accgcccgct gccgtttttt
    24961 gccaaaacct cgcttgccgc cgccgaagcg tttgcccaaa aacaagattg ggaagccgcc
    25021 ctgaaaaaag cccaaaccgc ctattacggc agcaaagtca gcaaagggca gaaagactat
    25081 accgaagtcg ccctcgtgtt cggcaacgca agccaaaacc cgctcgaaca gcccctgttt
    25141 gaaaacctcg tccgtctgct tgccgacacg tttgccgcag cggaaaaaaa ggaagaggcc
    25201 ggagcagcct gacgggatgg aaaggcaaat gccgtctgaa aacagcaaaa aggttttcag
    25261 acggcatttt gtttatcgtg tttaaggtgc gggatagaat gtgggcgcgc cgggaccgac
    25321 gggcaggccc aaaacaaata cccaaatgca gaataaggca atccacgcaa tcaagaagaa
    25381 agcggaatac ggcaacatca tagaaatcag cgtacccacg cccgcatctt ttttgtattt
    25441 gatcaccgtc gccataatca gcccgaaata actcatcatc ggcgtaataa tattggtaac
    25501 ggaatcaccg atgcggtaag cggcttgaat gacttcgggc gcgtagccgg ccaacatcag
    25561 catagggacg aaaatcggcg cagttaccgc ccattgcgcg gaggcggagc ctatcatcag
    25621 attgataaaa gcacaaatta aaataaaacc gataaacaac acgctgccgc ccaagccgac
    25681 ttcttttaag aacgtcgccc ctttaacggc aatatattgc ccaatattcg tccaattaaa
    25741 aaatgcgaca aactgtgcgg caaaaaagat gatgaccaaa taaagcccca gagtactcat
    25801 cgattcggcc atcgcattaa cgacttcctg ttcgccgcgc aaacttcggg ttaccctgcc
    25861 ataaacaatg cccggcagcg caaacaacaa gaaaataaaa acaacaatcg attttaaaaa
    25921 cggcgaaccg gaaaccaatc ctgtttcagg atgacgcaaa ataccgtcgg cagggacgat
    25981 gctccaagcc aatagggcgg ataaggcaac aaacaccacg ccagcccaaa ttaatccttt
    26041 atattccaaa ggcgtgattt cattggaatg ccgaatgtct ttttcttctt gtgacaaatc
    26101 tgattgataa gggcccaatt gcggttcgac gattttttca gtaacaaaat aaccaatcaa
    26161 agcaatcaca aacgtactgg ctaccataaa aaaccagttg gcttcagggc ctacgacgta
    26221 gtcgggatgg atgatttgcg ccgcctgttg ggtgatgcct gccaagagcg gatcgattgt
    26281 gcctaagaac agattggccg aataaccgcc cgaaacgccg gcgaaagccg cagccagacc
    26341 ggcaagcgga tggcggccga gggaatgaaa gatgatggcg gacaaaggga ttaggacgac
    26401 atagcccaat tcagaagcgg tattagataa aatccctgta aaaacaacca taaaagtagt
    26461 gagtttgcgt ggagattttg tgagcaataa gcgcattaat gcggaaatca agcccgattt
    26521 ttccgcaatc cccacgccca ataaagaaac caacaccgtt cccaacggcg cgaaaccggt
    26581 gaaattttta acggtatgcg tcaggatttt gatcaaaccg tcagcatcga gcaggctgac
    26641 aacgtgaatc aaaccgtcat cggcacgtcc tttcgcacca acagggcgcg gatcggggac
    26701 ggatagtccg aaatacgcac cggcggcaga ggcaatcagc aataacacaa tgaaaataat
    26761 aaaaagcgta accgggtgcg gcaacatatt gcccagccat tcgactgtgc gtaaaaatcg
    26821 tccgtcccgt tgcgtatcgg tttgactcat ctgcttctcc ttaaaaaata tattgagtgc
    26881 attaaatttt tgaatgtaac atgaagtgtt ttgtaagcaa actaaaataa tcgcatatgt
    26941 atataaccgc aatagattaa aacagaaaat gcccacatcg ttattctcat aaaggcggta
    27001 atccgaaaac ttgacgttaa agccttatca ggaatgactg gaactcaaca aagcggtttc
    27061 ccgctttcgc ggaaatggcg ggattttcgg tttttgtttg caaaaatgcc ggagaaaaat
    27121 gcagtttaca ttttgaatgg tattgttatt aattgtaaat aaatattgga aggtaaatga
    27181 tatgaaaaat gaaattcaaa aaattatgga caaatatgat ccatggcatg aagatgattt
    27241 tgagtcgtat gaaaacattg ccagagatgt atcgttgatg acagataaaa cgttcattga
    27301 acattatttg ttagaagttt attcagaaga aaacggacat tttgaccaag agaatgtcca
    27361 tgcaatgata gaagaaatta aaaatgcaat ttagtgaata tgtattttta gaagaaggct
    27421 ttgtgtcatt ttgatgccgt ctgaaagggt ttgttcgttt cagacggcat tgttaccaag
    27481 gcttgattat ttccggcgca ggtcgggatg gttttccaag ttgtccatca ttatcccgat
    27541 gatgcgcggg gcggttttgc ccaaatcgaa acgttcgcag gaagagaacc accgccaaat
    27601 cagcccgtcc aaggttgatt tgatgaagat gaccgccgtt tccttgtcca aatcgtcagc
    27661 caaatcctga ttttccaccg cttcggtcaa aacggcggta attttctcgc gccagattgc
    27721 ctgatgcttg cgggcaatgg cgataacggc ggcgttttgc tccgtgtgtt cgcattttaa
    27781 aaacaggatg ttgtggaatt tgtagtagat gtcgttgctt tgcagccgct cgaaaaagtg
    27841 cagcagcgtg tggcggaata ccgcccaaga ccctccttcg gcatcttcgg catcttgcgc
    27901 gatgcagttt tcgatgtcgt cgcagatacg ttggaacagc gcgtcgaaca agtcttcctt
    27961 atttttgaaa tgccaataga gcgcgccgcg cgttacgccg gcggcttggg cgatttcgtt
    28021 gagcgaggtg cgcgcaatcc ctttgcggta aaaggtttcc aaggcggcaa gcatcaggtg
    28081 ttctttggtt ttcaaggctt cggttttggt ttttctcata atggcgtttt cgtttcgggt
    28141 cggtttgatg agggcggatt ataaaaaaga ctttgtaacc atgcaatcgt gtatgtataa
    28201 tgaaacccat gaaattgaga ctacatctca actttgaaaa caggcataac ctgctttgca
    28261 acccgttcga acattcgggt atcaaagcag gcggttttta tatcct
//
LOCUS       DBBZXU010000013        27755 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.013, whole genome shotgun sequence.
ACCESSION   DBBZXU010000013 DBBZXU010000000
VERSION     DBBZXU010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 27755)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27755)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27755
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.013"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            171..794
                     /gene="lolA"
                     /locus_tag="ACJJDE_000473"
     CDS             171..794
                     /gene="lolA"
                     /locus_tag="ACJJDE_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HGG7540459.1"
                     /translation="MMKPHNLFQFLAVCSLTVSVASAQAGAVDALKQFNNDADGISGS
                     FTQTVQSKKKTQTAHGTFKILRPGLFKWEYTSPYKQTIVGDGQTVWLYDVDLAQVTKS
                     SQDQAIGGSPAAILSNKTALESSYTLKEDGSSNGIDYVLATPKRNNAGYQYIRIGFKG
                     GNLAAMQLKDSFGNQTSISFGGLNTNPQLSRGAFKFTPPKGVDVLSN"
     gene            1067..2206
                     /locus_tag="ACJJDE_000474"
     CDS             1067..2206
                     /locus_tag="ACJJDE_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7540460.1"
                     /translation="MKKTLVAAAILSLALTACGGGSDTAAQTPSAKPEAGQSGKLNIY
                     NWSDYVDPETVAAFEKETGIKTRSDYYDSNETLEAKVLTGKSGYDLTAPSIANVGRQI
                     KAGAYQKIDKAQIPHYGNIDKDLLKMMEAVDPGNEYAVPYFWGINTLAINTQQVKKAL
                     GTDKLPENEWDLVFKPEYTAKLKSCGISYFDSAIEQIPLALHYLGKDPNSENPEDIKA
                     AVDMMKAVRGDVKRFSSSGYIDDMAAGNLCAAIGYGGDLNIAKTRAEEAANGVEIKVL
                     TPKTGVGVWVDSFMIPRDAQNVANAHRYIDYTLRPEVAAKNGSFVTYAPASRPARELM
                     DEKYTSDASIFPNKELMEKSFIVSPKSAESAKLGVKLWQGLKAGK"
     gene            2338..2628
                     /locus_tag="ACJJDE_000475"
     CDS             2338..2628
                     /locus_tag="ACJJDE_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7540461.1"
                     /translation="MDLSIVVPIYNVESYLEACLNSIEPILSNENVELILVNDGSKDG
                     SEDICYKYIDKTTNNKQQTTNNKQQTTNNKQQTTNNKQHQIPNTKHQIYISG"
     gene            2615..2749
                     /locus_tag="ACJJDE_000476"
                     /pseudo
     CDS             2615..2749
                     /locus_tag="ACJJDE_000476"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family A protein"
     gene            2759..3394
                     /locus_tag="ACJJDE_000477"
     CDS             2759..3394
                     /locus_tag="ACJJDE_000477"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HGG7540462.1"
                     /translation="MPDVVFLNAVKYDKGSVSHFGEDYQPEKILKQSKVEVLKGLCRF
                     RKFPGSACNKIIKRELIIKEKLFFEKEVYAEDIEWSMRLFNAATTFSYLDGCYYYYRQ
                     GRKDSKTGTVSEKSIKSLLYILEKNAEMEFDRDISSYLYSFLSYEYLVLLFIMTSKNI
                     ECDADIKRRAYHLRFMLLKSNKLIYKLIFPIITLFGVDITGRILKAIRGNI"
     gene            3435..3965
                     /locus_tag="ACJJDE_000478"
     CDS             3435..3965
                     /locus_tag="ACJJDE_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HGG7540463.1"
                     /translation="MNAIRTFQNRTPEIHESCMIDEACVVIGEVSLAEDVSVWPCAVL
                     RGDVNSITVGARSNIQDGSVLHVSHKTAAKPEGSPLVIGEDVTVGHKVMLHGCRIGNR
                     VLVGMGTTVLDDAVIEDEVMIGAGSLVPPRKRLEGGYLYVGSPVRQVRVLTDEEKAFL
                     KYSAAHYVKLSKQYGM"
     gene            complement(3999..4115)
                     /locus_tag="ACJJDE_000479"
     CDS             complement(3999..4115)
                     /locus_tag="ACJJDE_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor domain protein"
                     /protein_id="HGG7540464.1"
                     /translation="MPSEPEKRLSDGIFACNSNADGQNQGASDTVIGCVPSA"
     gene            complement(4330..5925)
                     /locus_tag="ACJJDE_000480"
     CDS             complement(4330..5925)
                     /locus_tag="ACJJDE_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007342770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HGG7540465.1"
                     /translation="MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGT
                     VKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVL
                     TAVDSALMVIDAAKGVEAQTIKLLNVCRLRNTPIVTFMNKYDREVRDSLELLDEVENI
                     LQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRF
                     PLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
                     PKPRDATVRMVKPDEPKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRI
                     NREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFA
                     PELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSR
                     LANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVN
                     LGLTQERWPDIVFHETREHSVKL"
     gene            complement(6032..6427)
                     /gene="hisI"
                     /locus_tag="ACJJDE_000481"
     CDS             complement(6032..6427)
                     /gene="hisI"
                     /locus_tag="ACJJDE_000481"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HGG7540466.1"
                     /translation="MDKNLLEAVKFDEKGLVCAIAQDAETKRVLMVAWMNAEALQKTV
                     ETGFAHYYSRSRQKQWMKGEESGHTQKVRELRLDCDGDAIVMLIAQNGGIACHTGRES
                     CFYKVWRGGAWETADAVLKDEKEIYGSTH"
     gene            complement(6458..7225)
                     /gene="hisF"
                     /locus_tag="ACJJDE_000482"
     CDS             complement(6458..7225)
                     /gene="hisF"
                     /locus_tag="ACJJDE_000482"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HGG7540467.1"
                     /translation="MALAKRIIPCLDVKDGRVVKGVNFIGLRDAGDPVEAAKRYNGEG
                     ADELTFLDITASSDNRDTILHIIEEVAGQVFIPLTVGGGVRTVADIRRLLNAGADKVS
                     INTAAVTRPDLIDEAAGFFGSQAIVAAVDAKAVNPENTRWEIFTHGGRNPTGLDAVEW
                     AIEMQKRGAGEILLTGMDRDGTKQGFNLPLTRAVAEAVDIPVIASGGVGNVRHLIEGI
                     TEGKADAVLAAGVFHFGEIAIREAKRAMREAGIEVRL"
     gene            complement(7238..7975)
                     /gene="hisA"
                     /locus_tag="ACJJDE_000483"
     CDS             complement(7238..7975)
                     /gene="hisA"
                     /locus_tag="ACJJDE_000483"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HGG7540468.1"
                     /translation="MLLIPAIDLKEGRCVRLRQGLMEEATVFSDSPAETALHWFKQGA
                     RRLHLVDLNGAFAGVPQNLPAIKDILAAVAKDIPVQLGGGIRDLKTIGQYLDLGLNDV
                     IIGTAAVKNPDFVREACKAFPGRIIVGLDAKDGMAAIDGWATVTGHHVIDLAKRFEDD
                     GVNSIIYTDIGRDGMMSGVNIDATVKLAQTVRIPVIASGGLTGLDDIRALCAAEKHGV
                     AGAITGRAIYEGSIDFAQAQQLADSLD"
     gene            complement(8008..8646)
                     /gene="hisH"
                     /locus_tag="ACJJDE_000484"
     CDS             complement(8008..8646)
                     /gene="hisH"
                     /locus_tag="ACJJDE_000484"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HGG7540469.1"
                     /translation="MQIAIIDYGMGNLHSVLKSVWTAGQLAGKNTEIFLSGDPERVSR
                     ADKVIFPGQGAMPDCIAALTRGGLDEAVKDALKNKPFFGICVGAQLLFDHSEEGNTDG
                     LGWFGGKVRRFERDLRDRQGCRLKVPHMGWNTVRQTQNHPLFKDIPQNTRFYFVHSYY
                     FDPENPETILGESDYPSPFACIVGKDNVFATQFHTEKSHDAGLTMLKNFLNW"
     gene            complement(8777..10279)
                     /gene="pta"
                     /locus_tag="ACJJDE_000485"
     CDS             complement(8777..10279)
                     /gene="pta"
                     /locus_tag="ACJJDE_000485"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016407 - acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HGG7540470.1"
                     /translation="MAKVLIVPVSAGLDASAAAQAFAKALDAQIFQAVDATAETLLAQ
                     GKSDDWFDALVGKVAALDAANLVIEGIAPDADKIYLAGKNVELALSLDAAAVFAVRSD
                     NADADELANRLNLAKQFFAAAPGVLEGFVVDGAAASVAEAAAEKTGLTFFGSSDALKD
                     VSVLAGREAKRLSPAQFRYNLIDFARQADKRIVLPEGAEPRTVQAAAICHEKGIARCV
                     LLAKREEVEAVAKERGISLPDSLEIIDPASLVEQYVGPMCELRKSKGLTPEDARKQLQ
                     DTVVLGTMMMAQNDVDGLVSGAVHTTANTIRPALQLIKTAPGASLVSSVFFMLLPNQV
                     LVFGDCAVNPNPTAQQLADIAIQSADSAKAFGIDPKVAMISYSTVNSGSGPDVDTVIE
                     ATKLAREKRPDLAIDGPLQYDAATVPGVGKSKAPGSPVAGQATVLVFPDLNTGNCTYK
                     AVQRSANVLSVGPLLQGLRKPVNDLSRGALVEDIVFTIALTAVQAKQMEG"
     gene            complement(10464..11522)
                     /gene="fbpC"
                     /locus_tag="ACJJDE_000486"
     CDS             complement(10464..11522)
                     /gene="fbpC"
                     /locus_tag="ACJJDE_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter ATP-binding protein FbpC"
                     /protein_id="HGG7540471.1"
                     /translation="MTAALHIGHLSKSFQNTPVLNDISLSLDPGEILFIVGASGCGKT
                     TLLRCLAGFEQPDFGEISLSGRTIFSKNTNLPVRERRLGYVVQEGVLFPHLTVYRNTA
                     YGLGNGKGKTAQERQRIEAMLELTGISELAGRYPHELSGGQQQRVALARALAPDPELI
                     LLDEPFSALDEQLRRQIREDMIAALRANGKSAVFVSHDREEALQYADRIAVMKQGRIL
                     QTASPHELYRQPADLDAALFIGEGIVFPAALNADGTADCGLGRLPVQSGAPAGTRGTL
                     LIRPEQFSLHPHSAPTASIHAVVLKTTPKARHTEISLRVGQTVLTLNLPSAPTLSDGI
                     SAVLHLDGPALFFPGNTL"
     gene            complement(11543..13060)
                     /gene="fbpB"
                     /locus_tag="ACJJDE_000487"
     CDS             complement(11543..13060)
                     /gene="fbpB"
                     /locus_tag="ACJJDE_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease FbpB"
                     /protein_id="HGG7540472.1"
                     /translation="MSPKKIPIWLTGLILLIALPLTLPFLYVAMRSWQVGINRAVELL
                     FRPRMWDLLSNTLTMMAGVTLISIVLGIACALLFQRYRFFGKTFFQTAITLPLCIPAF
                     VSCFTWISLTFRVEGFWGTVMIMSLSSFPLAYLPVEAALKRISLSYEEVSLSLGKSRL
                     QTFFSAILPQLKPAIGSSVLLIALHMLVEFGAVSILNYPTFTTAIFQEYEMSYNNNTA
                     ALLSAVLMAVCGIVVFGESIFRGKAKIYHSGKGVARPYPVKTLKLPGQIGAIVFLSSL
                     LTLGIIIPFGVLIHWMMVGTSGTFALVSVFDAFIRSLSVSALGAILTILCALPLVWAS
                     VRYRNFLTVWIDRLPFLLHAVPGLVIALSLVYFSINYTPAVYQTFIVVILAYFMLYLP
                     MAQTTLRTSLEQLPKGMEQVGATLGRGHFFIFRTLVLPSILPGITAAFALVFLKLMKE
                     LTATLLLTTDDVHTLSTAVWEYTSDAQYAAATPYALMLVLFSGIPVFLLKKYAFK"
     gene            complement(13128..14123)
                     /gene="fbpA"
                     /locus_tag="ACJJDE_000488"
     CDS             complement(13128..14123)
                     /gene="fbpA"
                     /locus_tag="ACJJDE_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     FbpA"
                     /protein_id="HGG7540473.1"
                     /translation="MKTSIRYALLAAALTAATPALADITVYNGQHKEAAQAVADAFTR
                     ATGIKVKLNSAKGDQLAGQIKEEGSRSPADVFYSEQIPALATLSAANLLEPLPASTIN
                     ETRGKGVPVAAKKDWVALSGRSRVVVYDTRKLSEKDLEKSVLNYATPKWKNRIGYAPT
                     SGAFLEQVVAIVKLKGEAAALKWLKGLKEYGKPYAKNSVALQAVENGEIDAALINNYY
                     WHAFAREKGVQNVHTRLNFVRHRDPGALVTYSGAAVLKSSQNKDEAKKFVAFLASKEG
                     QRALTAVRAEYPLNPHVVSTFNLEPIAKLEAPQVSATTVSEKEHATRLLEQAGMK"
     gene            complement(14374..14844)
                     /locus_tag="ACJJDE_000489"
     CDS             complement(14374..14844)
                     /locus_tag="ACJJDE_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4375 domain-containing protein"
                     /protein_id="HGG7540474.1"
                     /translation="MTDTDTQADRFEQMMWQAVDKLFEQHDGKLESMDGREQELVLIW
                     RTEADIGNGGILQFVCNWGFPAAEKTCSVLKKIGAIHSAMLIHRAADALRKEIRHLQS
                     EGKNLKEMWDITKHLDNKTASLPNSLDEQYWQDPDKLYLPGWQYYSGNPVQTLF"
     gene            complement(14901..16277)
                     /gene="argH"
                     /locus_tag="ACJJDE_000490"
     CDS             complement(14901..16277)
                     /gene="argH"
                     /locus_tag="ACJJDE_000490"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HGG7540475.1"
                     /translation="MHDKTWSGRFNEPVSELVKQYTASIGFDRRLAEWDIQGSLAHAQ
                     MLKETGVLDEGDLADIRRGMAEILEEIRSGKIEWSSDLEDVHMNIERRLTDKIGDAGK
                     RLHTGRSRNDQVATDIRLWLRDQITVIQSLIQNLQTALLDLAEQNAETVMPGFTHLQV
                     AQPVSFGHHMLAYVEMLGRDNERMADCRRRVNRMPLGAAALAGTTYPIQREITAELLG
                     FEQICQNSLDAVSDRDFAVEFTAAASLVMVHLSRLSEELILWMSPRFGFIDIADRFCT
                     GSSIMPQKKNPDVPELVRGKSGRVIGHLIGLITLMKSQPLAYNKDNQEDKEPLFDTAD
                     TLIDTLRIYADMMRGVTVKPDNMRAAVMQGFATATDLADYLVKKGMPFRDAHEVVAQA
                     VRHADEAGVDLSELPLEVLQGFSDLIADDVYGVLTPEGSLNARNHLGGTAPEQVRFQV
                     KRWREMLA"
     gene            complement(16296..17165)
                     /gene="galU"
                     /locus_tag="ACJJDE_000491"
     CDS             complement(16296..17165)
                     /gene="galU"
                     /locus_tag="ACJJDE_000491"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003983 - UTP:glucose-1-phosphate
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006011 - UDP-glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HGG7540476.1"
                     /translation="MKPIKKAVFPVAGMGTRFLPATKASPKEMLPIVDKPLIQYAVEE
                     AVEAGCTEMVFVTGRNKRSIEDHFDKAYELETELEMRHKDKLLEHVRNILPPNITCLY
                     IRQAEALGLGHAVLCARAAIGDEPFAVILADDLIDAPKGALKQMVEVYGRSGNSILGV
                     ETVEASQTGSYGIVETEQLKQFQRIIGIVEKPKPEDAPSNLAVVGRYILTPRIFDLLT
                     GLPRGAGNEIQLTDGIAKLLDHEFVLAHPFEGTRYDCGSKLGYLEATVAYGLKHPETG
                     EPFRRLLEKYRTE"
     gene            complement(17193..17792)
                     /gene="rdgB"
                     /locus_tag="ACJJDE_000492"
     CDS             complement(17193..17792)
                     /gene="rdgB"
                     /locus_tag="ACJJDE_000492"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035870 - dITP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0036222 - XTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HGG7540477.1"
                     /translation="MSEKPEKIVLASGNAGKLEEFGNLFKPYSITVLPQSAFGIPECP
                     EPYPTFVENALAKARHAAEYSGLPALADDSGICAAALNGAPGIHSARYAGDNPKSDTA
                     NNLKLAAELAGKTDKSCCYVCVLVFVRHKDDPRPIIAEGVWHGQWNGVPAGENGFGYD
                     PYFYLPGHGKTAAELDSEVKNRESHRAQALADLIRKLAL"
     gene            complement(17785..18018)
                     /locus_tag="ACJJDE_000493"
     CDS             complement(17785..18018)
                     /locus_tag="ACJJDE_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO_0222 family membrane protein"
                     /protein_id="HGG7540478.1"
                     /translation="MNRRKIYLLSVALFTLAFMLLVLLGAYLLTVGSKAFAVASFLFA
                     FGALFGQIGSLALYLRHKSLRAAQSAAKENRYV"
     gene            complement(18126..18659)
                     /locus_tag="ACJJDE_000494"
     CDS             complement(18126..18659)
                     /locus_tag="ACJJDE_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HGG7540479.1"
                     /translation="MADFNQILTPGDVDGGIINVVNEIPAGSNHKIEWNRKLAAFQLD
                     RVEPAIFAKPTNYGFIPQTLDEDGDELDVLLVTEQPLATGVFLEARVIGVMKFVDDGE
                     VDDKIVCVPADDRNNGNAYKTLSDLPQQLIKQIEFHFNHYKDLKKAGTTKVESWGDAE
                     EAKKVIKESIERWNKQA"
     gene            complement(18761..19219)
                     /gene="nudB"
                     /locus_tag="ACJJDE_000495"
     CDS             complement(18761..19219)
                     /gene="nudB"
                     /locus_tag="ACJJDE_000495"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008828 - dATP diphosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0019177 - dihydroneopterin triphosphate
                     pyrophosphohydrolase activity [Evidence IEA];
                     GO_process: GO:0046656 - folic acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HGG7540480.1"
                     /translation="MPMAKPLKYPVSALVVLYSGDGGILLIERTHPEGFWQSVTGSLE
                     PGETVAQTARREVWEETGILLADGQLQDWHDSTVYEIYHHWRHRYPKGVFENREHLFS
                     AEIPRDTPIALQPEEHVSYGWFGLEEAAEKVFSPSNRRAILELGRFLGKR"
     gene            19430..19506
                     /locus_tag="ACJJDE_000496"
     tRNA            19430..19506
                     /locus_tag="ACJJDE_000496"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:19464..19466,aa:Pro,seq:ggg)
     gene            19664..21490
                     /gene="mafB"
                     /locus_tag="ACJJDE_000497"
     CDS             19664..21490
                     /gene="mafB"
                     /locus_tag="ACJJDE_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
                     /protein_id="HGG7540481.1"
                     /translation="MGISRKISLILSILAVCLPMHAHASDLANDSFIRQVLDRQHFEP
                     DGKYHLFGSRGELAERSGHIGLGNIQSHQLGNLFIQQAAIKGNIGYIVRFSDHGHEVH
                     SPFDNHASHSDSDEAGSPVDGFSLYRIHWDGYEHHPADGYDGPQGGGYPAPKGARDIY
                     SYDIKGVAQNIRLNLTDNRSTGQRLADRFHNAGAMLTQGVGDGFKRATRYSPELDRSG
                     NAAEAFNGTADIVKNIIGAAGEIVGAGDAVQGISEGSNIAVMHGLGLLSTENKMARIN
                     DLADMAQLKDYAAAAIRDWAVQNPNAAQGIEAVSNIFTAVIPVKGIGAVRGKYGLGGI
                     TAHPVKRSQMGAIALPKGKSAVSNNFADAAYAKYPSPYHSRNIRSNLEQRYGKENITS
                     STVPPSNGKNVKLADQRHPKTGVPFDGKGFPNFEKHVKYDTKLDIQELSGGGIPKAKP
                     VFDAKPRWEVDRKLNKLTTREQVEKNVQEIRNGNKNSNFSQHAQLEREINKLKSADEI
                     NFADGMGKFTDSMNDKAFSRLVKSVKENGFTNPVVEYVEINGKAYIVRGNNRVFAAEY
                     LGRIHELKFKKVDFPVPNTSWKNPTDVLNESGNVKRPRYRSK"
     gene            21493..21957
                     /locus_tag="ACJJDE_000498"
     CDS             21493..21957
                     /locus_tag="ACJJDE_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540482.1"
                     /translation="MAIWNYRYYLIPSAAIRNKFNANKDIILDEYRSNGFQNFNENKS
                     FENYFIDNDVILLSIINEAKKQLKLKESWDKDAIMFCDNFGNSLTVWPDDIECELDLR
                     FDYTKFIQKTIDWAIKYNCLLVIEKTGNVVSPNINNLMYEIKAYLESKPWPI"
     gene            22182..22328
                     /locus_tag="ACJJDE_000499"
     CDS             22182..22328
                     /locus_tag="ACJJDE_000499"
                     /inference="COORDINATES: protein motif:HMM:NF012755.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540483.1"
                     /translation="MWYEANIGLINTMSRSNQAGTRLLYSNYGLLYITTDHYISATRF
                     VAWK"
     gene            22340..22627
                     /locus_tag="ACJJDE_000500"
     CDS             22340..22627
                     /locus_tag="ACJJDE_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="barstar family protein"
                     /protein_id="HGG7540484.1"
                     /translation="MQLEIIGSKIYTEQDFHNQISKIFSIQDYYGNNLDALWDLLSTN
                     VERPITLVWKDAMFSKNQLENIFIEIVNVLERVKKQDEDYGFEEKFNYILE"
     gene            23141..24379
                     /locus_tag="ACJJDE_000501"
     CDS             23141..24379
                     /locus_tag="ACJJDE_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
                     /protein_id="HGG7540485.1"
                     /translation="MIASLTGAAVGGTPVDAQTGGAVGQNAVENNLYLTSEALKKDKQ
                     TARKIYSVIKEQVKHECSSTGRITECRQNIGRIIEFTQDKRFDSRFKDLKKESLYYLN
                     KHPDLVASYLKAEYEKLDREDKSILHRYISPGAEIVSGSLGVVLSGVAGGGSCAETFG
                     LGCAAALVGVTSSYDHVITGTKNFGKKASEQRPTIAVQALKQLGLSEQAAEYVQFSID
                     LFSVGKSGGGIPKAKPVFDAKPRWEVDRKLNKLTTREQVEKNVQETRRRSQSSQFKAH
                     AQREWENKTGLDFNHFIGGDINKKGTVTGGHSLTRGDVRVIQQTSAPDKHGVYQATVE
                     IKKPDGSWEVKTKKGGKVMTKHTMFPKDWDEARIRAEVTSAWESRIMLKDNKWQGTSK
                     SGIKIEGFTEPNRTAYPIYE"
     gene            24410..24829
                     /locus_tag="ACJJDE_000502"
     CDS             24410..24829
                     /locus_tag="ACJJDE_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540486.1"
                     /translation="MKRIKCFCDKFPSGDTFRMCIILDDYDNRVDYYVGIYDYITSTL
                     MSDIYYRSTIDEHFKIIELIENNPNEIYDDGGGQQFCLEFHHDKVIFYHNEFDEEDGY
                     PVLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            24866..25840
                     /gene="mafB"
                     /locus_tag="ACJJDE_000503"
                     /pseudo
     CDS             24866..25840
                     /gene="mafB"
                     /locus_tag="ACJJDE_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258126.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 2"
     gene            25851..26312
                     /locus_tag="ACJJDE_000504"
     CDS             25851..26312
                     /locus_tag="ACJJDE_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540487.1"
                     /translation="MNLETAENIQCEFEYLALDGYFPMHFASHGQGNKDWQFAVEFIY
                     RLLICQLATLEPINFETKNDILDFCHNLAKQSPFNNDNEVWYQGEIVLTKKGIDLIKE
                     YIPEAFEEWNGKKFELNIPFIKTLKNIFVNYEVAWDENNPLFPIISLNLGT"
     gene            26299..26586
                     /locus_tag="ACJJDE_000505"
                     /pseudo
     CDS             26299..26586
                     /locus_tag="ACJJDE_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229180.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="EndoU domain-containing protein"
     gene            26613..27032
                     /gene="mafI"
                     /locus_tag="ACJJDE_000506"
     CDS             26613..27032
                     /gene="mafI"
                     /locus_tag="ACJJDE_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein MafI"
                     /protein_id="HGG7540488.1"
                     /translation="MYKIKCFYDQFSSGELFNYCQFLDNSSNQKINTRGTVYQYIIYV
                     LTGDLYLQKDIDENLEFIHQAENNPNEVYSGGGQGFCWDISAEKVVFYHNEFDEEDGW
                     PDLSCSLHTFKTALIAWNAFLQLPKSIHSVVETVIEE"
     gene            27122..27193
                     /locus_tag="ACJJDE_000507"
                     /pseudo
     CDS             27122..27193
                     /locus_tag="ACJJDE_000507"
                     /inference="COORDINATES: protein motif:HMM:NF026862.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin type 17 domain-containing
                     protein"
     gene            27190..27432
                     /gene="imm31"
                     /locus_tag="ACJJDE_000508"
     CDS             27190..27432
                     /gene="imm31"
                     /locus_tag="ACJJDE_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm31 family immunity protein"
                     /protein_id="HGG7540489.1"
                     /translation="MTNLKLDFYSEVIIKDSCPNDLLENGETIKGKKGVVLGISEEDG
                     IIYGYTILLFDIKYCIYIDKKYIIPTGKKFSRDDFY"
     gene            27510..27755
                     /locus_tag="ACJJDE_000509"
     CDS             27510..27755
                     /locus_tag="ACJJDE_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7540490.1"
                     /translation="MKDSTGQMRLATKDLAEAIKRGEVRSSAFTTKQLKAIEKGESKI
                     PDYTWHHHQDTGRMQLINEDLHHDTGHIGWRAMSKGK"
BASE COUNT         6963 a         6333 c         7659 g         6800 t
ORIGIN      
        1 cgcggcacac attaaagggc agcgtggcgc gcctgccttt tccgagcggt caaaaaaatc
       61 agccctcgga aaacgctgtt tgtaaaatgc aaaccgcccg taacgccgcc cgtatgattg
      121 ttttgccgcg ccgatacttt acgccacacc catcccaaca aggaaaaata atgatgaaac
      181 cgcacaacct gttccaattt ctcgccgttt gctccctgac cgtctccgtc gcttccgcac
      241 aggcgggcgc ggtggacgcg ctcaagcaat tcaacaacga tgccgacggt atcagcggca
      301 gcttcaccca aaccgtccaa agcaaaaaga aaacccaaac cgcgcacggc acgttcaaaa
      361 tcctgcgccc gggcctcttc aaatgggaat acacttcgcc ctacaaacag actattgtcg
      421 gcgacggtca aaccgtttgg ctctacgatg tcgatttggc acaagtgacc aagtcgtccc
      481 aagaccaggc cataggcggc agccccgccg ccatcctgtc gaacaaaacc gccctcgaaa
      541 gcagctacac gctgaaagag gacggttcgt ccaacggcat cgattatgtg ctggcaacgc
      601 ccaaacgcaa caatgccggc taccaataca tccgcatcgg cttcaaaggc ggcaacctcg
      661 ccgccatgca gcttaaagac agcttcggca accaaacctc catcagtttc ggcggtttga
      721 ataccaatcc ccaactctcg cgcggcgcgt tcaagtttac cccgcccaaa ggcgtggacg
      781 tgttgagcaa ctgatgccgt ccgcctcgat gccgtctgaa tgccgccgag gcttcagacg
      841 gcattttcac gcaggcggaa caatgtcccg cattaccgcc cgatcgggca tcggaacggc
      901 aaacccgtga aaattaacgg ttgcgccccg gttgtttttg ccgtttaatg caaaccttgc
      961 tgcaccaagg gccaagaaag ccgaccggcc gcccccacag cttccgatgc aggcggcccg
     1021 tccgtccctg caatgttttt tatttttgaa cgaaaggtcg aaaaccatga aaaaaacact
     1081 ggtggcggcg gcgatcctga gcctcgcctt gactgcgtgc ggcggcggaa gcgataccgc
     1141 cgcccaaacc ccctccgcca agcccgaagc cggacaatcg ggcaaactca atatctacaa
     1201 ctggtcggat tatgtcgatc ccgaaaccgt cgccgccttt gaaaaagaaa ccggcatcaa
     1261 gacgcgttcc gattattacg acagcaacga aacactggag gcaaaagtcc tgaccggcaa
     1321 atccggctac gacctgaccg cgccgtccat cgccaacgtc ggccggcaaa tcaaagcggg
     1381 tgcgtatcag aaaatcgaca aggcgcaaat cccccattac ggcaacatcg ataaagattt
     1441 gctgaaaatg atggaagccg tcgatccggg caacgaatat gccgtgcctt atttctgggg
     1501 aatcaatact ttggcaatca atacccagca ggtgaaaaag gcattgggta cggacaagct
     1561 acccgaaaac gagtgggatt tggtgttcaa acccgaatac accgccaaac tcaaatcctg
     1621 cggcatcagc tatttcgaca gcgcaatcga acagattccc ttggcgttgc actatttggg
     1681 caaagacccc aacagtgaaa atcctgaaga catcaaagcc gccgtcgata tgatgaaagc
     1741 cgtccggggc gacgtgaaac gcttcagctc ttccggctat atcgacgata tggcggcggg
     1801 caacctgtgt gccgccattg gttacggcgg cgatttgaac attgccaaaa cccgtgccga
     1861 agaagccgca aacggcgtgg aaatcaaagt attgaccccg aaaaccggcg tgggcgtgtg
     1921 ggtggattcc tttatgattc cgcgcgacgc gcaaaacgtc gccaacgccc accgctatat
     1981 cgactacacg ctccggcccg aggtggcggc gaaaaacggc agcttcgtta cctacgcgcc
     2041 cgccagccgt cccgcgcgcg agctgatgga tgaaaaatac acctccgacg catcgatttt
     2101 cccgaacaaa gaactgatgg aaaaaagttt catcgtatcg cccaaatccg cagaatccgc
     2161 caaactgggc gtgaagctgt ggcaagggct caaggccgga aaataaccgc aacctctgcc
     2221 gtctgaaacc tttcgggcgg caggaaacgg cgcgtccgtt atcaaacagg gggcgtttcc
     2281 ccgcccgcct gttatgattg ggttaagatt aaaatgattt agtaaaatga gaaagatatg
     2341 gatttaagta tcgtagttcc catttataat gtcgagagtt atttggaagc gtgtctaaat
     2401 tccatagaac ctatattaag taatgaaaat gtcgaactta tccttgtgaa tgacgggtca
     2461 aaagacggaa gtgaagatat atgttataaa tatatagata aaacaacaaa caacaaacaa
     2521 caaacaacaa acaacaaaca acaaacaaca aacaacaaac aacaaacaac aaacaacaaa
     2581 caacaccaga taccgaacac caaacatcaa atatatatat caggataacc aagggacggc
     2641 agaagctagg aataccggaa taaaaaattc aaacggaaaa tatatagtct ttattgattc
     2701 ggatgatttt attaattgtc aggtcttgct ggattttctt agtaaagatg atattgatat
     2761 gccggatgtg gtttttttaa atgcggttaa atatgataag ggaagtgttt cacattttgg
     2821 cgaagattat cagcctgaaa aaatactcaa gcaatccaaa gtcgaagttt tgaaaggatt
     2881 atgccgattt agaaaatttc cgggttcggc gtgtaataag attataaaaa gggaattgat
     2941 tatcaaagaa aaactgtttt ttgaaaaaga ggtttatgcc gaagatatcg aatggtcaat
     3001 gagattattt aatgcggcaa caactttttc ttatttggac ggttgttatt actattatcg
     3061 gcagggaaga aaagattcta aaacaggaac tgtttcggaa aaaagtataa agtcattatt
     3121 atatattttg gagaaaaatg cggaaatgga atttgatagg gatatatcaa gttatcttta
     3181 ttcttttctt tcctacgaat atctcgtttt gctttttatc atgacgagta aaaatataga
     3241 gtgtgatgct gatataaaaa gaagggcgta tcatttaagg tttatgctgt taaagtccaa
     3301 taaattgata tataagctga tattcccgat aatcacatta ttcggggtcg atattacagg
     3361 caggatttta aaagcaatca gggggaatat ttaataaatc ctttaacact atacatctta
     3421 ccgaaggagg aaaaatgaac gcaatccgaa ctttccaaaa ccgcacgccc gaaatccacg
     3481 aaagctgtat gatagacgaa gcgtgcgtcg tcatcggcga agtgtcgctt gccgaagacg
     3541 tttccgtgtg gccgtgcgcc gtgttgcgcg gcgatgtgaa cagcatcacc gtcggcgcgc
     3601 gcagcaatat acaggacggc agcgtcctgc acgtttccca caaaaccgcc gccaaacccg
     3661 aagggtcgcc gctggttatc ggcgaagacg ttaccgtggg gcacaaagtg atgctgcacg
     3721 gctgccgtat cggcaaccgc gtcctggtcg gcatggggac gacggttctg gacgatgccg
     3781 tgattgagga cgaagtgatg atcggcgcgg gcagcctcgt gcctccgcgc aaacgtttgg
     3841 agggcggcta tctttatgtc ggttcgccgg tcagacaagt gcgcgtgttg accgatgagg
     3901 aaaaagcctt tttgaagtat tccgccgcgc attatgtgaa gctgtcgaaa cagtacggga
     3961 tgtgaaatca catcggcgtt cttgcgtcag ccccaaattc atgcggatgg gacgcatccg
     4021 ataacggtat ccgatgcgcc ttgattttga ccgtctgcgt ttgagttgca ggcaaaaatg
     4081 ccgtctgaaa gccttttttc gggttcagac ggcattttat cgcctaaagt ttgaccgaat
     4141 gttcgcgcgt ttcgtggaac acgatgtccg gccagcgttc ttgcgtcagc cctaaattca
     4201 tgaggacggg atgcccgata acggtatccg atgcgtcttg attttgatcg gtgcatttga
     4261 gttgcaggca aaaatgccgt ctgaaagcct tttttcgggt tcagacggca ttttatcgcc
     4321 gattgctttt tacagtttaa ccgaatgttc gcgcgtttcg tggaacacga tgtccggcca
     4381 acgttcttgc gtcaacccca aattcacgcg gttgggggcg aggtaggcga ggttgccgcc
     4441 cgcgtcgatg gcgaggttgc ccgcgttggc tttttcaaac tccgccagtt ttttcttgtc
     4501 gtcgcacgat acccagcgcg ccgaccagat ggatgcgctg tcgaacacgg cttctacgcc
     4561 gtattcgttg gccagccgcg aggtaacgac ttcaaactgc aacacgccga ccgcgcccaa
     4621 aatcaaatcc gcgccgctca tcggtttgaa tacctgtacc gcgccttctt cgccaagctg
     4681 ttgcaaacct ttttgcagtt gcttgatttt cagcgggttt ttgatgcgga cgctgcggaa
     4741 cagttcgggc gcaaagaatg ggatgccggt aaacgccagt tgttcgcctt cggagaagct
     4801 gtcgccgatt tggatgttgc cgtggttcgg gatgccgatg atgtcgccgg cgtaggcttc
     4861 ttccaccagc tcgcggtcgt gcgacataaa ggttaccacg ctggaggcag cgatttcgcg
     4921 gttgatgcgc aggtgtttca tcttcatacc gcgctcgaat ttgccggagc agacgcgcaa
     4981 gaaggcgatg cggtcgcggt gtttcggatc catattggct tggattttaa agataaatcc
     5041 ggagaatttc ggctcgtccg gcttgaccat acgtacggtc gcgtcgcgcg gtttcggcgc
     5101 gggcgcccag tcaatcaatg aattgaggat ttcctgaata ccgaagttgt taatcgcaga
     5161 gccgaagaat acgggcgtga gttcgccggc gaggaattcg tcgagattaa actcgttgga
     5221 agccgcctgc accaattcga tttcgtcgcg caactgctgg atttccaatg gaaagcgttg
     5281 ttccaattcg ggattgtcga tgcctttgat gatgtcgaac tcgtgcggca gacgttcgcc
     5341 accggcttca aagagataga tttcgtcgtt caggatgtgg tacacgcctt tgaagttttt
     5401 gcccatgccg atcggccagg ttacgggcgc gcagcggatt tgcaggatgt tttccacttc
     5461 gtccagcaac tccaaagaat cgcgcacttc gcggtcgtat ttgttcatga acgtgacaat
     5521 cggcgtattg cgcaggcggc agacgttcaa gagtttgatg gtttgcgctt ccacaccttt
     5581 tgccgcgtcg atgaccatca aggcgctgtc cacggcggtc agaacgcggt aggtgtcttc
     5641 ggagaagtct tggtgtcccg gcgtgtccaa gaggttgacg gtgtggtctt tgtagtcgaa
     5701 ctgcatcacg cttgatgcca cggaaatgcc gcgctgcttc tcgatgtcca tccagtcgga
     5761 ggtggcgaat ttgccggttt ttttgccttt taccgtaccc gcgctctgaa tcgcgcccga
     5821 aaacagcaac agcttttcgg tcagcgtggt tttacccgcg tcggggtggg agatgatggc
     5881 aaacgtgcgg cggcggcgca cttggtcgag gatttcttgg gacatggttt tctttgcaaa
     5941 aaggttcagg ccgcttttca gacggcccgg acagtgtttg agacggcgaa attgtacaaa
     6001 aaaatgcctg ataattcaat gttggaggcg gtcagtgcgt gctgccgtaa atctcttttt
     6061 cgtctttcag gacggcatcg gcggtttccc acgcgccgcc gcgccagact ttgtaaaagc
     6121 agctttctcg cccggtgtgg caggcgatgc cgccgttttg ggcgatgagc atcacaatgg
     6181 cgtcgccgtc gcagtcgagg cgcagttcgc ggactttttg cgtgtgtccc gactcttcgc
     6241 ccttcatcca ttgtttttgg cgcgaacggc tgtaatagtg ggcaaagccg gtttcgacgg
     6301 ttttttgcag ggcttcggcg ttcatccacg ctaccattaa aacacgtttg gtttcggcat
     6361 cttgggcgat ggcgcaaacc aaaccttttt cgtcaaattt gacggcttca agcaggtttt
     6421 tatccatatt tcctttcaga cggcatagtc ggggcggtca gaggcgcact tcgatgccgg
     6481 cttcgcgcat agcgcgtttg gcttcgcgga tggcgatttc cccgaaatgg aaaacgccgg
     6541 cggcaagtac ggcatcggct ttgccttcgg ttatgccttc aatcaggtgc cggacattgc
     6601 cgaccccgcc ggaggcgatg acggggatgt cgacggcttc ggcaacggcg cgggtcagcg
     6661 gcaggttgaa accctgtttc gtaccgtccc tgtccatacc ggtaagcagg atttcgcccg
     6721 cgccgcgttt ttgcatttcg atcgcccatt ccaccgcatc caaaccggtc ggattgcgcc
     6781 cgccgtgggt aaagatttcc cagcgtgtgt tttcggggtt gacggctttg gcatcgacgg
     6841 cggcgacgat ggcttgcgaa ccgaaaaatc cggcggcttc gtcaatcagg tcgggacggg
     6901 taacggcggc ggtgttgatg ctgactttgt ccgcgccggc attgagcagg cggcggatgt
     6961 cggcaacggt gcgtacgccg ccgccgacgg tcagcgggat gaagacttgt ccggcaactt
     7021 cttcgatgat gtgcaggatg gtatcccggt tgtcggatga ggcggtgatg tcgaggaagg
     7081 tcaattcgtc cgcgccttcg ccgttgtagc gtttggcggc ttcgacgggg tcgcccgcgt
     7141 cgcgcaaacc gatgaagttc acgcctttga cgacgcgccc gtcttttacg tcgagacagg
     7201 ggatgatgcg ttttgccagt gccataatcg gatgccttta gtcgagggaa tctgccagtt
     7261 gctgcgcttg ggcaaaatcg atgctgccct cgtaaatcgc gcggccggta atcgcgcctg
     7321 ctacgccatg tttttcggcg gcacacaggg cgcggatgtc gtccaagccg gtcagtccgc
     7381 cggaggcgat gacgggaatg cggacggttt gggcgagttt gaccgtcgcg tcgatgttca
     7441 cgccgctcat cataccgtcg cgcccgatgt cggtgtagat gatgctgttg acgccgtcgt
     7501 cttcaaagcg ttttgccaaa tcaattacat gatgcccggt tacggttgcc cagccgtcga
     7561 tggcggccat accgtctttg gcatccagcc cgacaataat cctgccgggg aaggctttgc
     7621 acgcctcgcg cacgaagtcg gggtttttga ccgccgccgt gccgataatc acgtcgttca
     7681 gacccaaatc caaatattgt ccgatggttt tcaaatcgcg tatgccgccg ccgagctgta
     7741 cggggatgtc tttggcgacg gcggcaagga tgtctttgat ggcgggcagg ttttgcggaa
     7801 cgccggcaaa cgcgccgttc aaatctacca gatgcaggcg gcgcgcgcct tgtttgaacc
     7861 agtgcagtgc ggtttcggcg ggcgaatcgg aaaagacggt cgcctcttcc atcagccctt
     7921 gtctcaggcg gacgcagcgt ccttctttca aatcgatggc gggtatcagc agcataattt
     7981 ttctccttgt gcggggccgt gtccggctta ccagtttaaa aagtttttca acatcgtcag
     8041 cccggcatcg tggctttttt cggtgtgaaa ttgcgtggcg aatacgttgt ctttgccgac
     8101 gatgcaggca aacggggacg ggtagtcgct ttcgcccaat atggtttcgg gattttcggg
     8161 gtcgaaatag tagctgtgga cgaagtaaaa acgcgtgttt tggggaatat ctttaaacag
     8221 cgggtggttt tgggtttggc gcacggtgtt ccagcccata tgcgggactt tcagacggca
     8281 tccctgccgg tcgcggaggt cgcgctcaaa gcgtctgact ttgccgccga accagcccaa
     8341 gccgtcggtg tttccttctt cactgtggtc gaataaaagt tgcgcgccga cgcagattcc
     8401 gaaaaagggt ttgtttttta aggcatcttt gactgcctcg tccaagccgc cgcgcgtcag
     8461 tgccgcaata cagtcgggca tcgcgccctg cccgggaaaa atgactttgt cggcgcggga
     8521 cacgcgttcg gggtcgccgc ttaaaaagat ttcggtattt tttccggcaa gctgccccgc
     8581 cgtccagacg gatttcaata cggaatgcag gttgcccata ccgtaatcga taatggcgat
     8641 ttgcatggct tcctcctctt tttttgcaat atggctgcga ttttaacaaa caaatgtgcc
     8701 gtgctgataa aaatgccgtc tgaaaacggg agtctgtctt cagacggcat agggtttaaa
     8761 cccggaaagc cgtttgtcag ccttccattt gttttgcctg aacggcagtt agggcgatgg
     8821 tgaacacgat gtcttccacc agcgcgccgc gcgacaggtc gttgaccggt ttgcgcaggc
     8881 cttgcagcag cgggccgacg cttaagacgt tggcactgcg ttggacggct ttataggtgc
     8941 agttgccggt gttcaggtcg gggaagacca aaacggttgc ctgtcctgcc accgggctgc
     9001 ccggagcttt ggatttgccc acgcccggca cggttgccgc atcatattgc agcgggccgt
     9061 cgatggcgag gtcggggcgt ttttcccggg caagtttggt tgcttcgatg acggtatcga
     9121 catcggggcc gctgccggag ttgacggtgg agtaggaaat catcgccact ttcgggtcga
     9181 tgccgaaggc ttttgcggaa tcggcagact ggatggcgat gtcggcaagc tgttgcgcgg
     9241 tcgggttcgg attaaccgcg cagtcgccga agacgaggac ttggttgggc agcagcataa
     9301 agaatacgct ggacacgagg cttgcgcccg gtgcggtttt aatcagttgc aaagcggggc
     9361 ggatggtgtt ggcggtggtg tgaaccgcac cggataccaa accgtccaca tcattttgcg
     9421 ccatcatcat cgtaccgagt accacggtgt cttgcagttg cttgcgcgcg tcttcgggtg
     9481 tcaggccttt ggatttgcgc agttcgcaca tcggtccgac gtattgttcg accaatgagg
     9541 cgggatcgat gatttccaaa gagtcgggca ggctgatgcc gcgttctttg gcaacggctt
     9601 cgacttcttc gcgtttggca agcaggacgc agcgggcaat gcctttttcg tggcagatgg
     9661 cggcggcttg gacggtgcgg ggttctgcgc cctcaggcag gacgatgcgt ttgtcggctt
     9721 ggcgggcgaa gtcgatcagg ttgtagcgga attgcgccgg cgacaggcgt tttgcttcgc
     9781 ggcctgccaa tacggatacg tctttcagcg cgtcgctcga accgaagaag gtcaggccgg
     9841 ttttttcggc tgccgcttcg gcaacggagg ctgccgcgcc gtccacgaca aaaccttcca
     9901 atacgcccgg cgcggcggcg aagaactgtt tggcaaggtt cagccgattt gccagttcgt
     9961 cggcatcggc gttgtcggaa cggacggcga agacggctgc cgcgtcaagg gacaatgcca
    10021 gttcgacgtt tttgcctgcg aggtagattt tgtcggcatc gggcgcgatg ccttcgatga
    10081 cgaggttggc ggcatcgagt gcggcaactt tgccgaccag tgcgtcgaac cagtcgtcgc
    10141 ttttgccttg cgcgagcagg gtttcggcgg ttgcgtcaac ggcttggaaa atttgtgcgt
    10201 ccagtgcttt tgcaaaggct tgtgcggcgg cggaggcgtc cagtccggca gatacgggta
    10261 cgatgagtac ttttgccatg atatatcctt tcgtatgctg cggtgtgcgg catatgtggt
    10321 tggaaggggc ggcatatagg cagaaacggc tgcctgcgtg ccgtgcgtgc cgtgtttggc
    10381 ttgaggcgcg caggttgaat atagcaaaca aattctgttt ccaacaagat aaatatccgc
    10441 aggcttgtgg atgctgccgc ctttcagagg gtatttccgg ggaagaacag ggcgggaccg
    10501 tccaaatgga ggacggcgga aatgccgtct gacagggtgg gggcggaagg gaggttgagc
    10561 gtgaggacgg tttgtccgac ccggaggctg atttcggtat gccgcgcttt gggcgtggtt
    10621 ttgagaacca cggcgtgaat ggaggcggtg ggtgcggaat gggggtgaag gctgaactgt
    10681 tccggacgga tgagcagtgt gccgcgtgtg cctgcgggtg cgccgctttg aacgggcagg
    10741 cggcccaatc cgcaatcggc ggtgccgtcg gcgttgagcg cggcggggaa cacgatgcct
    10801 tcgccgataa acagggcggc atcaaggtcg gcaggttgtc ggtacaattc gtgagggctt
    10861 gcagtttgga ggatgcgccc ctgtttcatc acggcaatcc ggtcggcgta ttgcagggct
    10921 tcttcgcggt cgtggctgac gaaaacggca gatttgccgt tggcgcgcag ggcggcaatc
    10981 atgtcttcgc gaatctggcg gcgcaactgt tcgtccagcg cgctgaaggg ttcgtccaac
    11041 aaaatcagtt cgggatcggg tgcgagggcg cgggcgaggg cgacgcgctg ttgctgtccg
    11101 cccgaaagtt cgtgcggata gcgtccggca agttcggaaa tgccggtcaa ttccaacata
    11161 gcttcgatgc gctgccgctc ttgcgccgtc ttgcctttgc cgttgcccag cccgtaggcg
    11221 gtgttgcggt aaacggtcag gtgggggaac agcacacctt cctgtacgac ataacccaaa
    11281 cggcgttcgc ggacggggag gttggtattt ttcgagaaga tggttctgcc ggaaagcgaa
    11341 atttcgccaa aatcgggttg ttcaaaaccg gcaaggcagc gtaaaagggt ggttttgccg
    11401 cagccggacg cgccgacgat aaagaggatt tcgcccgggt cgaggctgag cgaaatgtcg
    11461 tttaaaactg gggtgttttg aaaacttttg gacaggtgtc cgatgtgcag ggcggcggtc
    11521 atggcggtac ttcctcaagc tgttatttga aggcgtattt cttcagcagg aatacgggga
    11581 tgccggaaaa taataccagc atcagcgcgt aaggggtggc ggcggcgtat tgtgcgtccg
    11641 atgtgtattc ccaaacggcg gtggagagtg tgtggacatc gtcggtggtc agcagcaggg
    11701 tggcggtcag ctctttcatc agtttgagga agacgagtgc gaatgcggcg gtaatgccgg
    11761 gcaggatgga cggcagtacc aacgtcctga aaataaagaa gtgtccgcgc cccaatgttg
    11821 cgccgacctg ttccatccct tttgggagtt gttccaagga agtcctcagg gtggtttgcg
    11881 ccatcggcag gtaaagcatg aaataggcaa ggatgacgac gataaaggtt tggtaaacgg
    11941 caggggtgta gttgatgctg aaataaacca aggatagggc gataaccaaa ccggggacgg
    12001 cgtgcagtaa aaacggcagc ctgtctatcc aaacggttaa aaaattgcga tagcgaaccg
    12061 atgcccaaac aaggggcaag gcacataata tagtcaaaat cgcacctaaa gccgatacgc
    12121 ttaaggaacg gataaaggca tcaaatacgg atacgagcgc gaatgtgccg gaagtgccga
    12181 ccatcatcca atgtatcaat acgccaaagg ggataataat gcccaaagtc aacaagctgc
    12241 ttaaaaaaac aatcgcgcca atctgaccgg gcagtttgag ggttttgacg ggataaggac
    12301 gggcaacgcc tttgccgctg tggtaaatct tggctttgcc gcgaaatatg ctttctccaa
    12361 atacgacgat gccgcacacc gccattaaaa cagcggaaag cagggcggcg gtattgttgt
    12421 tgtaggacat ttcgtattct tggaaaatgg cggtggtaaa agtggggtag ttcaaaatgg
    12481 ataccgcgcc aaattcgacc aacatatgca gggcaatcag taacacgctg ctgccgatgg
    12541 cgggtttgag ctgggggagg atggcggaaa aaaaggtttg caggcggctt ttgcccaagg
    12601 acaggctgac ttcttcgtaa gacaggctga tgcgtttgag tgccgcctcg acgggcaggt
    12661 aggcgagcgg gaacgaggac aggctcataa tcatcactgt cccccaaaag ccttcgacac
    12721 ggaaggtcag gctgatccag gtgaaacagc tgacaaatgc ggggatgcac aaaggcaggg
    12781 tgattgccgt ctgaaaaaag gttttgccga agaagcggta acgttggaac aaaagggcgc
    12841 aggcaatgcc caaaacaatg gaaatcaggg taacgcccgc catcatcgtc aaggtgttgg
    12901 agagcaaatc ccacatacgc gggcggaaca acagttcgac ggcgcggttg atgccgacct
    12961 gccacgaacg catagcgaca tataaaaaag gcagggtaag cggtagggca atcagtagga
    13021 tgaggccggt aagccaaatg ggtatttttt taggagacat agtgtttttt atcggcaaaa
    13081 cgggcggaca gtataaatgt ccacccgttt gacaatccga aaacggctta tttcataccg
    13141 gcttgctcaa gcagccgggt ggcgtgttct ttttcggaaa cagtggtggc ggacacttgg
    13201 ggtgcttcca acttggcgat gggttccaaa ttgaaggtgg ataccacgtg cggattcaaa
    13261 ggatactcgg cacggacggc ggtcagggcg cgctgtcctt ccttgctggc gaggaaggcg
    13321 acgaattttt tcgcctcatc cttgttttgg gaggatttta acacggctgc gccggaatag
    13381 gtaacgagtg cgccgggatc tctgtggcgg acgaaattca ggcgggtgtg gacattttgt
    13441 acgccttttt cacgcgcaaa agcgtgccag tagtagttgt tgatgagggc ggcatcgatt
    13501 tcgccgtttt caaccgcttg aagggcgacg gagtttttag cgtaaggctt gccgtattct
    13561 ttcagacctt tgagccattt caatgcggcc gcttcgcctt tcagtttgac gatggcgaca
    13621 acctgttcca agaacgcgcc ggaagtgggg gcgtaaccga tgcggttttt ccatttcggc
    13681 gtggcgtaat tcaggacgga tttttccaaa tctttttcag acagtttgcg ggtgtcgtaa
    13741 acgacgacgc gcgaacgtcc gctcagtgcc acccagtctt ttttggcggc aaccggcacg
    13801 cccttgccgc gtgtttcgtt gatggtggag gcgggcaggg gctctaggag gttggcggcg
    13861 gaaagggtgg cgagtgccgg gatttgttcg gaatagaata cgtcggcggg gcttcggctg
    13921 ccttcttctt tgatttgacc ggcaagctgg tcgcctttgg cgctgttgag tttgactttg
    13981 atgccggtag cccgggtaaa ggcatctgca acggcttgtg ctgcttcttt gtgttggccg
    14041 ttgtacacgg taatgtctgc cagcgcgggg gttgcggcgg tcagggctgc ggcaagcagt
    14101 gcgtatcgga tagatgtttt catatcgatt ttctcctaat gaatgagagt gtacaccttg
    14161 ttaaaacata acggtgtgta gtgtattcct tcttctttat aaatgcaaat aattattttt
    14221 taaatttgtt attatccgat ccggttatgg tttgttctga cttgtatttt ttccgtgcat
    14281 cgcgcccgta aggcggaagc ggcgggcaat gcgtggcgga atgtgggtaa aggcggcatt
    14341 ttgatttgtc ggaatgcttg agaacccctc tctttaaaac agcgtctgaa cagggttgcc
    14401 ggaatagtat tgccatcccg gcagatacag tttgtcgggg tcttgccaat attgttcatc
    14461 cagactgttc ggcagtgagg cggttttgtt gtcgagatgt tttgttatat cccacatttc
    14521 tttcaggttt ttaccttccg attggaggtg gcggatttct tttctcaatg cgtctgccgc
    14581 ccgatggatc agcattgcgc tgtgtatcgc gccgattttt ttcagaacgg aacaagtctt
    14641 ttcggcggcg ggaaaacccc aattgcagac aaattgcagt atgccgccgt taccgatatc
    14701 ggcttctgtc cgccaaatca aaaccagctc ctgttcccgc ccgtccatgc tttcgagttt
    14761 gccgtcatgc tgttcaaaaa gtttgtccac cgcctgccac atcatctgtt cgaagcggtc
    14821 ggcttgggta tccgtatcgg tcatcgtgtt cttgcctttt aaaaatgccg tctgaacatt
    14881 tcttcagacg gcatcggggg ttaagccaac atttcccgcc agcgtttgac ttggaaacgg
    14941 acttgttcag gcgcggtgcc gcccaagtgg ttgcgcgcgt ttaagctgcc ttcgggtgtc
    15001 agcacgccgt aaacgtcgtc ggcaatcaaa tcgctgaaac cttgtaagac ttcgagcggc
    15061 agttcgctca aatcgacgcc agcttcatcg gcgtggcgca cggcttgggc gacgacttcg
    15121 tgggcatcgc ggaagggcat acctttttta accagataat ccgccaagtc ggtggcggtg
    15181 gcaaaaccct gcatcacggc ggcgcgcata ttgtcgggtt tgacggttac gccgcgcatc
    15241 atatcggcgt aaatccgcag cgtgtcgata agcgtgtcgg cggtgtcaaa caaaggttct
    15301 ttgtcttcct gattgtcttt gttgtacgcc aagggctgcg atttcatcag ggtaatcaag
    15361 ccgataaggt gtccgatgac tcggccggat ttgccgcgca cgagttcggg cacgtcgggg
    15421 tttttcttct gcggcatgat ggacgaacct gtgcagaaac ggtcggcgat gtcgataaag
    15481 ccgaaacgcg gactcatcca caaaatcaat tcttcagaca ggcggctcag gtgaaccata
    15541 accagcgagg cggcggcggt gaactcgacg gcaaaatcgc ggtcggatac ggcatcgagc
    15601 gagttttggc agatttgttc aaagcccaat agctcggcgg taatttcgcg ctgaatcggg
    15661 taggtcgtcc cggcaagggc ggctgcgccg agcggcatac ggttgacgcg gcggcggcag
    15721 tccgccatcc gttcgttatc gcggccgagc atttcgacgt aggcgagcat atggtgtccg
    15781 aagctgacgg gctgggcgac ttgcaggtgg gtaaagccgg gcataacggt ttcggcgttt
    15841 tgttccgcca aatccagcaa tgccgtctga aggttttgaa tcaggctttg gataacggta
    15901 atctggtcac gcagccacag gcggatgtcg gtggcgactt ggtcgttgcg gctgcggccg
    15961 gtgtgcaggc gtttgcccgc gtcgccgatt ttgtcggtca ggcggcgttc gatgttcatg
    16021 tggacatctt ccaaatcgga cgaccattcg attttgccgc tgcggatttc ttcgaggatt
    16081 tccgccatgc cccgacggat gtccgccaaa tcgccttcgt ccaacacgcc ggtttctttc
    16141 aacatttgcg cgtgtgccag cgagccttga atgtcccatt cggcaagccg tcggtcgaaa
    16201 ccgatggagg cggtgtattg tttgacgagt tcggaaacgg gttcgttgaa acgtccggac
    16261 caggttttgt cgtgcataag gattccttga tggggttatt cggtgcggta tttttccaaa
    16321 aggcggcgga agggttcgcc ggtttcgggg tgtttcaggc cgtaggcgac ggtggcttcg
    16381 aggtagccca gtttgctgcc gcagtcgtag cgcgtgcctt caaaggggtg cgccaggaca
    16441 aattcgtgat cgagcagctt ggcgatgccg tctgtaagct ggatttcgtt gcccgcgccg
    16501 cgcggcagtc cggtcagtaa gtcgaaaatg cgcggggtaa ggatgtagcg tccgacgacg
    16561 gcaaggttgg agggcgcgtc ttcgggcttg ggtttttcga caatgccgat aatgcgttgg
    16621 aactgtttga gctgttcggt ttcgacgatg ccgtatgagc cggtttgcga tgcttcaacg
    16681 gtttctacgc ccaaaatgct gttgccgctg cgcccgtaca cttcgaccat ttgtttgagc
    16741 gcgcctttgg gggcatcaat caggtcgtcg gcaaggataa cggcaaaggg ttcgtctccg
    16801 atggcggcgc gggcgcacaa gacggcgtgt cccaagccca gtgcttccgc ctgacggatg
    16861 tagaggcagg taatgttcgg cggcaggatg ttgcggacgt gttccaacaa tttgtcttta
    16921 tggcgcattt ccaactcggt ttcgagttcg tatgccttgt cgaaatggtc ttcgatgctg
    16981 cgtttgttgc gtccggtaac aaacaccatt tccgtgcagc cggcttccac ggcttcttct
    17041 acggcgtatt ggatcagcgg cttgtcgacg atgggcagca tttctttcgg gcttgccttg
    17101 gtggcgggca ggaagcgtgt tcccatccct gcgacgggga agacggcttt ttttatcggt
    17161 ttcattcttt ttcctttgta ttgttttgat gtttaaaggg cgagtttgcg gattaaatcg
    17221 gcgagtgcct gcgcgcggtg gctttcgcgg tttttgacct ccgaatccaa ttcggcggcg
    17281 gttttgccgt gtccgggcag ataaaaatac gggtcgtaac cgaaaccgtt ttcaccggcg
    17341 ggaacgccgt tccattgtcc gtgccatacg ccctcggcga taattggacg cgggtcgtct
    17401 ttatggcgga caaaaaccaa tacgcagacg tagcagcagc ttttgtcggt cttgccggca
    17461 agttcggcgg caagtttcag gttgttggcg gtatcggatt tgggattgtc gcccgcgtaa
    17521 cgtgcggaat ggatgcccgg cgcgccgttt agggcggcgg cacagatgcc gctgtcgtcg
    17581 gcaagcgcgg gcagcccgct gtattcggcg gcatggcgtg cttttgccag cgcgttttcg
    17641 acaaaggtgg gatagggttc ggggcattcg ggtatgccga atgcggattg cggcaatacg
    17701 gtgatgctgt aaggtttgaa taagttgccg aattcttcga gcttgccggc attgccgctt
    17761 gccaaaacga ttttttccgg tttttcagac atagcggttt tcctttgcgg cggattgggc
    17821 ggcgcgtagg gatttgtgcc gcaggtagag ggcgaggctg ccgatttgtc cgaacagtgc
    17881 gccgaatgcg aaaagaaagg aggcgacggc gaaggctttg ctgccgacgg tcagcagata
    17941 agcacccaag aggacgagca gcataaatgc cagtgtgaag agggcaacag acaacagata
    18001 gatttttcgg cggttcatgg cgttcggtcg gaaacggtat gttcggatta tagccgattg
    18061 ggacggtatt ccctagagct tggaaaaatg ccgtctgaaa cggcgttcag acggcatggc
    18121 gggcgttatg cctgtttgtt ccaacgttcg atggattctt tgatgacttt tttcgcttct
    18181 tccgcatcgc cccacgattc gactttggtc gtacctgctt ttttcaggtc tttgtaatgg
    18241 ttgaagtgga actcgatttg tttgatcagc tgttgcggca aatcggacaa agttttgtag
    18301 gcgttgccgt tgttgcggtc gtcggcagga acgcagacga ttttgtcgtc cacttcgccg
    18361 tcgtcaacga atttcatcac gccgataacg cgcgcttcca agaatacgcc ggttgccaaa
    18421 ggttgttcgg taacgagcag cacgtccaat tcgtcgccgt cttcgtccaa agtttgggga
    18481 atgaagccgt agttggtcgg tttggcgaag atggcgggtt cgacgcggtc gagttggaat
    18541 gcggcgagtt tgcggttcca ctcgattttg tggttgctgc cggcggggat ttcgttgacg
    18601 acgttgatga tgccgccgtc cacatcgccg ggggtcagga tttggttgaa gtctgccatt
    18661 tggtttcctt tgtttgggaa agtttgaagt ttgaaagtat agcacaaacg tccggctgaa
    18721 aatgcgcccg atgccgtctg aaagggtgta cgggcgcgtg ttaccgtttg cccaaaaacc
    18781 tgcccagttc cagaatcgcg cgcctgttgg acggggaaaa cactttttcc gccgcttctt
    18841 ccaagccgaa ccagccgtag gagacgtgtt cttcgggttg cagggcgatg ggcgtatcac
    18901 gcgggatttc ggcagagaag aggtgttcgc ggttttcaaa cacgcctttt ggatagcggt
    18961 gccgccagtg gtggtagatt tcgtaaaccg tgctgtcgtg ccagtcttga agctgcccgt
    19021 ccgccagcag gatgccggtt tcttcccaaa cttcgcgcct tgccgtttgg gcgacggttt
    19081 cgcccggttc gaggctgccg gttaccgact gccaaaatcc ttccggatgc gtgcgttcga
    19141 tgagcaggat gccgccgtcc ccgctataaa ggacgaccag tgcggagacg gggtatttga
    19201 gcggttttgc catcggcatc tttcggcggg ctgcggtaat gaaggggcgg attatagcaa
    19261 acgccgcacg ttatggcgtt tatccttttc cgtatccttt tttctgcacg gatgggacgc
    19321 gccggtgttt gccggtaaat tttccgttgt gtcaaaaaga taagggcggt tgtgatttta
    19381 atgcttgcca aagcgtcggg cggaaactat aatccgaaac ttatcgagtc ggagtgtggc
    19441 gcagtctggt agcgcacttg catggggtgc aaggggtcga aggttcgaat cctttcactc
    19501 cgaccaaaaa ttccgaaagc cgctttcaaa agcggctttt ttgccgtccg tatgattatg
    19561 atgtagagta cgcggcgaca gacattcaaa tgccgtctga aaaccgttca gatggcatct
    19621 ctttatctta gtttcattcc gtaccatctt aaggaacatc aaattgggca tttcccgcaa
    19681 aatatccctt attctgtcca tactggcagt gtgcctgccg atgcatgcac acgcctcaga
    19741 tttggcaaac gattctttta tccggcaggt tctcgaccgt cagcatttcg aacccgacgg
    19801 gaaataccac ctattcggca gcagggggga acttgccgag cgcagcggtc atatcggatt
    19861 gggaaacata caaagccatc agttgggcaa cctgttcatc cagcaggcgg ccattaaagg
    19921 aaatatcggc tacattgtcc gcttttccga tcacgggcac gaagtccatt cccccttcga
    19981 caaccatgcc tcacattccg attctgatga agccggtagt cccgttgacg gattcagcct
    20041 ttaccgcatc cattgggacg gatacgaaca ccatcccgcc gacggctacg acgggccaca
    20101 gggcggcggc tatcccgctc ccaaaggcgc gagggatata tacagctacg acataaaagg
    20161 cgttgcccaa aatatccgcc tcaacctgac cgacaaccgc agcaccggac aacggcttgc
    20221 cgaccgtttc cacaatgccg gcgctatgct gacgcaagga gtaggcgacg gattcaaacg
    20281 cgccacccga tacagccccg agctggacag atcgggcaat gccgccgaag ccttcaacgg
    20341 cactgcagat atcgtcaaaa acatcatcgg cgcggcagga gaaattgtcg gcgcaggcga
    20401 tgccgtgcag ggtataagcg aaggctcaaa cattgctgtc atgcacggct tgggtctgct
    20461 ttccaccgaa aacaagatgg cgcgcatcaa cgatttggcc gatatggcgc aactcaaaga
    20521 ctatgccgca gcagccatcc gcgattgggc agtccaaaac cccaatgccg cacaaggcat
    20581 agaagccgtc agcaatatct ttacggcagt catccccgtc aaagggattg gagctgttcg
    20641 gggaaaatac ggcttgggcg gcatcacggc acatcctgtc aagcggtcgc agatgggcgc
    20701 gatcgcattg ccgaaaggga aatccgccgt cagcaacaat tttgccgatg cggcatacgc
    20761 caaatacccg tccccttacc attcccgaaa tatccgttca aacttggagc agcgttacgg
    20821 caaagaaaac atcacctcct caaccgtgcc gccgtcaaac ggcaaaaatg tcaaactggc
    20881 agaccaacgc cacccgaaga caggcgtacc gtttgacggt aaagggtttc cgaattttga
    20941 gaagcacgtg aaatatgata cgaagctcga tattcaagaa ttatcggggg gcggtatacc
    21001 taaggctaag cctgtgtttg atgcgaaacc gagatgggag gttgatagga agcttaataa
    21061 attgacaact cgtgagcagg tggagaaaaa tgttcaggaa ataaggaacg gtaataaaaa
    21121 cagtaacttt agccaacatg ctcaactaga gagggaaatt aataaactaa aatctgccga
    21181 tgaaattaat tttgcagatg gaatgggaaa atttaccgat agcatgaatg acaaggcttt
    21241 tagtaggctt gtgaaatcag ttaaagagaa tggcttcaca aatccagttg tggagtacgt
    21301 tgaaataaat ggaaaagcat atatcgtaag aggaaataat agggtttttg ctgcagaata
    21361 ccttggcagg atacatgaat taaaatttaa aaaagttgac tttcctgttc ctaatactag
    21421 ttggaaaaat cctactgatg tcttgaatga atcaggtaat gttaagagac ctcgttatag
    21481 gagtaaataa aaatggcaat ttggaattat cggtactacc ttatcccatc agctgctatc
    21541 agaaataaat ttaatgcaaa taaagatatc atacttgatg agtatcgatc taatggtttt
    21601 cagaatttta atgagaataa aagttttgaa aattacttta tcgataatga tgttatatta
    21661 ttatcaataa taaatgaagc aaaaaaacag cttaaattga aagaatcttg ggataaagac
    21721 gcaatcatgt tttgtgataa ttttggtaat agtcttaccg tttggccaga tgatatagag
    21781 tgcgaacttg atttaagatt tgattatact aaatttattc agaaaaccat tgattgggca
    21841 ataaaatata attgtctact tgtaatagaa aaaacaggaa atgtagtttc ccctaatata
    21901 aataatctga tgtatgaaat aaaagcatat ttggaaagca agccgtggcc catatgaaac
    21961 ctaaactcaa caagtaggat gtgtgcggaa cgcacgtatg cggttctcaa ggtttgagct
    22021 aagaggccgt ctgaaaacag aaaaactgtt tcagacgacc tttcttttaa ccagttgcca
    22081 cagcaaccgg acaaaagcag cctacctcca catccatata ggcaatacag gggagatatt
    22141 ttgtaaattc tacgaatatt ttacctgcta aacagggtag gatatggtat gaagcgaaca
    22201 ttggcttaat aaacactatg tcaagatcga atcaggctgg tactagattg ttgtattcca
    22261 attatggatt gctatatata acaactgatc attatatctc tgcaacacgg tttgtagctt
    22321 ggaaatagga gtataactta tgcaattaga gattatcggt agtaaaattt atacggaaca
    22381 agattttcat aatcaaattt caaaaatatt ttctatacaa gattattatg ggaacaatct
    22441 tgatgcttta tgggatttat taagcacaaa tgtagaacga ccgattactt tggtatggaa
    22501 agatgctatg ttctcaaaaa atcaattaga aaatatattt attgaaatcg taaatgttct
    22561 agaaagagtt aagaaacaag atgaggatta tggattcgaa gaaaaattta attatatttt
    22621 agagtaagta aaccctaatt acattacgta cacaggctta aaactcccca gagccaatta
    22681 agcaagccgt aacccatata aaacttaaac tcaacaagta gcatgtgtgc ggaacgtacg
    22741 catgcggttc ttaaagtttg agctaagagg ccgtctaaaa acagaaaaac cgtttcagac
    22801 ggtctttgtt taacgccacc gatccagcgg gttacaaagc gcagtcaatg ccgctgcgcc
    22861 ttatgcctcc gaagcaatag gcagaacatt tggacacggt gaaaacaaaa acgaaaccgc
    22921 ccaagccgtc ggacatttcc ttttaggagc agctattgcc cgcgtcaacg gtggtaattt
    22981 tgctgccggc ggctcggcag cagttgcagc tgaaaaggcg gcggaacatc ttgcccaaca
    23041 gtataacgac ggtaaaaccg caatcgatcc gcaaacaggc gagttcaatg ccaacctgct
    23101 gccggaacat atcaaagagg aaatcaaatc aaagagcggg gtgattgcat cgctgacggg
    23161 cgcggccgtg ggcggcacgc cggtagatgc gcaaaccgga ggtgcggtcg gacagaatgc
    23221 ggtggaaaac aacctctatc tgacatcgga agccttaaag aaggacaagc agacagctcg
    23281 taaaatttat tccgtcataa aagagcaagt caagcatgaa tgcagttcca caggaagaat
    23341 taccgaatgt cgtcaaaata taggacgcat tatcgaattt acccaagaca aacgctttga
    23401 cagtaggttt aaggacttaa aaaaagaatc cttatattac ctaaataaac atcctgattt
    23461 agtagcctct tatttgaagg ctgaatacga aaagctggat agggaagaca aaagtatcct
    23521 gcaccgctac atctcacccg gggctgaaat cgtttcgggc agtttggggg ttgttctttc
    23581 aggagtagcc ggaggcggat cttgtgccga gactttcggc ttaggctgtg ccgccgcttt
    23641 ggttggtgta acgtcttcct acgatcatgt cattactggg acgaaaaact tcggaaaaaa
    23701 agccagcgag caacgaccga cgattgcggt tcaggccttg aagcagttgg ggctgtcgga
    23761 gcaggctgcg gaatatgttc agttctctat agatttgttc agtgtgggta aatcgggggg
    23821 cggtatacct aaggctaagc ctgtgtttga tgcgaaaccg agatgggagg ttgataggaa
    23881 gcttaataaa ttgacaactc gtgagcaggt ggagaaaaat gttcaggaaa cgagaagaag
    23941 gagtcagagt agtcagttta aagcccatgc gcaacgagaa tgggaaaata aaacagggtt
    24001 agattttaat cattttatag gtggtgatat caataagaaa ggcacagtaa caggagggca
    24061 tagtctaacc cgtggtgatg tacgggtgat acaacaaacc tcggcacctg ataaacatgg
    24121 ggtttatcaa gcgacagtgg aaattaaaaa gcctgatgga agttgggagg tgaaaacgaa
    24181 aaaaggtggg aaagtgatga ccaagcacac catgttccca aaagattggg atgaggctag
    24241 aattagggct gaagttactt cggcttggga aagtagaata atgcttaagg ataataaatg
    24301 gcagggtaca agtaaatcgg gtattaaaat agaaggattt accgaaccta atagaacagc
    24361 atatcccatt tatgaatagt aatatttatg aaaaattagg agattaatga tgaaaagaat
    24421 taagtgcttt tgtgataaat ttccatcagg agatacattt agaatgtgta tcattctgga
    24481 tgactatgat aatagggttg attattatgt aggaatatat gattacatta cgtctacctt
    24541 aatgagcgat atttactatc gatccacgat tgatgagcat ttcaagatta tagaattaat
    24601 agaaaataat ccaaatgaaa tttatgatga tggcggtggt caacaatttt gcctagaatt
    24661 tcatcatgat aaggtcattt tttatcacaa tgaatttgat gaagaagatg gttatccagt
    24721 attaagctgt tcgctgcata cttttaaaac tgctttaatt gcttggaatg cttttttgca
    24781 attgcctaaa agtattcatt cggtggtgga gactgtgatt gaggaataag cataattagc
    24841 ttaatgaata gaatcagcga tatagaaagg tagaatcaga tatatcccac ctaaaaatta
    24901 ctctccttca gcaccgctac caaaaggacc taataatgga tatagtgccg ggaatttaag
    24961 caaaaaagtc ctgactttag tttacataaa cggcaaactc aaattcgggc caagcagtct
    25021 gccgtcttcg gcattgaaag cacctgttcc cattgtcggc aaggctgagg ctccgcccgg
    25081 aaaagctgtg cctgtcggcg aagcccgcat tccttcaaat ccaaaagcgg taaaaggaac
    25141 aaccgttacc ctgtcgcagg aacaacgcct agccaacgga gagctgatac cgaaaggctc
    25201 tgtggtaacg tggtcggaca atgcggtgaa ggttgtgcgg cctgatggga aaaagcggag
    25261 atttaatagt cgggattggg aacagaaggc attgccgaaa ccgcaactac cgaaagatta
    25321 cagagatgac atcaacatag gtggaaataa tcctagattt aatcagcaac ggcatgaaaa
    25381 aatcgaatcc cacaacccaa acagaataga ggagatacgc caacgtaatg ccgtttcttc
    25441 tgcagaaagg caggctgatg cattaaaaag gatgcaaacg tctggccgca cccgcctgcc
    25501 tgggcagcca caaaaaggaa aacccggcgc tgctagagaa atgtcctctt cagacaatcc
    25561 gaatcaaaca gccgaggctt ttgcacgtcg atatttaggc aggaaaccta cactaatgga
    25621 acgagtcgaa ggtgaaaaat tatacggagg taaatgtgtg ggctgttgga aagcgcaaat
    25681 gccggacgga acctttgtgg tgtataggcc agcaggtaat gcttctatga ccaagggaac
    25741 tactgcgtct gttgatatta ataacccaac attaaataac ttaaatatta atttaaaagg
    25801 caagccaaca gagttaaaat ttaaattccc tgctagataa ggatgtttta atgaatttag
    25861 agacagcaga aaatattcaa tgcgaatttg agtatttagc attagatggt tattttccaa
    25921 tgcattttgc atcgcatggt caaggaaaca aagattggca atttgcagtt gaattcatat
    25981 atagattatt aatatgtcaa ttagcaactc ttgaacctat caactttgaa acgaaaaatg
    26041 atattttaga cttttgccat aatttagcaa aacaaagtcc ttttaataat gataatgagg
    26101 tgtggtatca gggggaaatt gtattaacaa aaaaagggat agatttaata aaggaatata
    26161 ttccagaggc gtttgaagag tggaatggaa agaaatttga attaaacatt cctttcatta
    26221 aaacattaaa aaatatattt gttaattatg aggtagcatg ggatgagaat aatccactat
    26281 tccccattat atctttaaac ctcggcacct gataaacatg gggtttatca agcgacagtg
    26341 gaaattaaaa agcctgatgg aagttgggaa atgaaaaaag gaaggggcgg aaaacctatg
    26401 acaaatcatt ctatgttccc aaaagattgg gatgaggcta gaattagggc tgaagttact
    26461 tcggcttggg agaaaagaaa ggaattagaa ggtcaaaaat ggagaggtac aagtaaatct
    26521 ggtgttgaaa tagaaggatt tacggaacct aatcgaacag cttatccact ttataatagt
    26581 aaatgaagta ttgattaaaa aggtgttttt aaatgtataa aataaaatgt ttttatgatc
    26641 agtttagttc tggtgaatta tttaactact gccagttttt agataattct tctaatcaaa
    26701 agataaatac acgaggaacg gtgtatcaat atattattta tgttttaaca ggagaccttt
    26761 atctacaaaa agacatagat gaaaatttag aatttatcca tcaagcagaa aataatccca
    26821 atgaagttta ttcaggaggt ggacaaggtt tttgctggga tatttctgct gaaaaagtag
    26881 ttttctatca caacgaattt gatgaagaag acggctggcc tgatttaagc tgttcgctgc
    26941 atacttttaa aactgcttta attgcttgga atgctttttt gcaattgcct aaaagtattc
    27001 attcggtggt ggagactgtg attgaggaat aagcataatt agcttaatga atagaatcag
    27061 cgatatagat tggactgcaa atccacgctt atacgctgtg ccatgattaa caggaagaga
    27121 gcaacttgga tgggctagta gggatggtaa gcatttaaat atatcaattg atggaaagat
    27181 tacacacaaa tgactaattt aaaattagat ttctactctg aagttattat aaaagattct
    27241 tgccctaatg atttgttaga aaatggtgag actattaaag gaaaaaaagg agtggtatta
    27301 ggtataagcg aagaagatgg tataatctat ggctatacta ttttactttt tgatataaaa
    27361 tattgtatat atatagataa gaaatatatt ataccgactg gaaaaaaatt ctctcgcgat
    27421 gatttttatt agctaattta agtaatttaa gcaagttttt tagatactga aactggtaat
    27481 tatgtttatg taagcataag gagttcagat tgaaggattc tacagggcaa atgaggctgg
    27541 caaccaagga tttggcggaa gccattaaac gaggagaagt acgtagttct gcttttacaa
    27601 caaagcaact aaaggcaatc gaaaaaggag aatctaaaat accggattac acttggcatc
    27661 atcatcaaga cactggaagg atgcaattga ttaatgaaga cttgcatcat gataccggcc
    27721 atatcggttg gagagcgatg agtaaaggaa agtaa
//
LOCUS       DBBZXU010000014        26198 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.014, whole genome shotgun sequence.
ACCESSION   DBBZXU010000014 DBBZXU010000000
VERSION     DBBZXU010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 26198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26198
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.014"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1..1188)
                     /locus_tag="ACJJDE_000510"
                     /pseudo
     CDS             complement(1..1188)
                     /locus_tag="ACJJDE_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003678130.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1334..2038
                     /locus_tag="ACJJDE_000511"
     CDS             1334..2038
                     /locus_tag="ACJJDE_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248833.1"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HGG7540491.1"
                     /translation="MLRSILAASLLAVSFPAAAEALNYNIVEFSESAGVEVAQDTMSA
                     RFQVAAEGRDKNAVNAEFVKKFNSFNRKLKNGSFKTELVSRSAMPRYQYTNGRRIQTG
                     WEERAEFKVEGRDFDALNRFIADVQTDASLEYTDFSVSRERRNEVIDQVSKDAILRFK
                     TRAEKLAGILGASGYKIVKLNLGHIGSHIAGGGAAQAKMLRAMPMAASVNMEGADSAA
                     QGVEEISISVNGTVQF"
     gene            complement(2102..2668)
                     /gene="dcd"
                     /locus_tag="ACJJDE_000512"
     CDS             complement(2102..2668)
                     /gene="dcd"
                     /locus_tag="ACJJDE_000512"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006229 - dUTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HGG7540492.1"
                     /translation="MSIKSDKWIRRMSEEFGMIDPFEPNQIKEADGKRIISYGTSSYG
                     YDIRCANEFKIFTNINSTIVDPKNFDPKNFVTVEDDCCIIPPNSFALARTVEYFRIPR
                     NVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGVAQVLFF
                     ESDEICKTSYKDRNGKYMGQTGVTLPKA"
     gene            complement(2734..3150)
                     /locus_tag="ACJJDE_000513"
     CDS             complement(2734..3150)
                     /locus_tag="ACJJDE_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MORN repeat-containing protein"
                     /protein_id="HGG7540493.1"
                     /translation="MLKHLAFLLPAMMFALPTSAAVLTSYQEPGCTYDGGVGKDGLPS
                     GKGIWRCRDGRGYTGSFKNGKFDGQGVYTVSANREIFIEPFNSDSTKFRNMVLSGTFK
                     KGLAHGRFTVSQNGETLFIMKCENGMIQEVKLPKNK"
     gene            complement(3212..4111)
                     /locus_tag="ACJJDE_000514"
     CDS             complement(3212..4111)
                     /locus_tag="ACJJDE_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HGG7540494.1"
                     /translation="MWFKQISFYPLNKEKLPEADVLADKLAEAEFTHCQGLDWFSEGF
                     AAPVSFSPELVFPADFTLRVALKKEEKVLPAGVIRDILEEKVAEIQNNEARNVGRKEK
                     QELKEQITDDLLPRAFTRSSRTEAVFNTRHGYLLVNNAASAKAENILTKLREALGGLE
                     ASLPNTKQSPSSLMTGWLLQGHCEGGFELDSDCELKGTGDIVPVVKVSKQDLTADEVV
                     QHVKNGKTVTQLGLVWREQIAFILTQDFTLKRIQYLDVLQEEAESNGDDAAGLAFASQ
                     ILMAESVSTMLEELVSYLGGWQD"
     gene            complement(4142..5599)
                     /gene="der"
                     /locus_tag="ACJJDE_000515"
     CDS             complement(4142..5599)
                     /gene="der"
                     /locus_tag="ACJJDE_000515"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003745900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HGG7540495.1"
                     /translation="MKPTIALVGRPNVGKSTLFNRLTRTKDALVHDLPGLTRDRHYGH
                     GKVGSKPYLVIDTGGFEPVVDSGILHEMAKQTLQAVDEADAVVFLVDGRTGLTPQDKI
                     IADRLRQSPRPVYLAVNKGEGGNRAVLAAEFYELALGDPYVISGAHGDGVYYLIEEIL
                     ENFPEPEVEEADAKHPVFAVIGRPNVGKSTLVNAILGEERVIAFDMAGTTRDSIHIDF
                     EREGKPFTIIDTAGVRRRGKVDEAVEKFSVIKAMQAVEAANVAVLVLDAQQDIADQDA
                     TIAGFALEAGRALVVAVNKWDGISEERREQVKRDINRKLYFLDFAKFHFISALKERGI
                     DGLFDSIQAAYNAAMIKMPTPKITRVLQSAIERQQPPRAGLVRPKMRYAHQGGMNPPV
                     IVVHGNSLHAISDSYTRYLTQTFRKAFNLQGTPLRIQYNVSENPYENAEDKPKKKPLR
                     RVSLSNRIEKREDRKEEKNRFKKKTKVSVKKQFSK"
     gene            complement(5749..6378)
                     /locus_tag="ACJJDE_000516"
     CDS             complement(5749..6378)
                     /locus_tag="ACJJDE_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HGG7540496.1"
                     /translation="MAAHLEEQQELDNFKYFWKTTGKWLFALLILAALGYLGYTVYQN
                     RAASQNQEAAAVLANIVEKAQNKAPQSEINAELTKLQQSYPHSISAAQATLMAAATEF
                     DAQRYDVAEGHLKWVLSNQKDSLIQALAAQRLGVVLLQQKKYDAALAALDTPVEADFS
                     PLLMETKGDVYAAQGKSQEALKNYGQALEKMPQDSVGRELVQMKLDSLK"
     gene            complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="ACJJDE_000517"
     CDS             complement(6379..7674)
                     /gene="hisS"
                     /locus_tag="ACJJDE_000517"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HGG7540497.1"
                     /translation="MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQVFEDTVNRWTRAYG
                     YQQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVE
                     HNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLW
                     EKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDT
                     KNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTV
                     FEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNA
                     APDVYAMHQGERADLQVMKYAQALRAQGFNVMQHSGYQSLKAQMKKADNSGARFALIV
                     AQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA"
     gene            complement(7803..8459)
                     /locus_tag="ACJJDE_000518"
     CDS             complement(7803..8459)
                     /locus_tag="ACJJDE_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG7540498.1"
                     /translation="MMKFKYVFLLACVVVSLSYRLNAAPMFNDNPVVYGKIKVQSWKA
                     RRDFNIVKQDLDFSCGAASVATLLNNFYGQTLTEEEVLKKLDKEQMRASFEDMRRIMP
                     DLGFEAKGYALSFEQLAQLKIPVIVYLKYRKDDHFSVLRGIDGNTVLLADPSLGHVSM
                     SRAQFLDAWQTREGNLAGKILAVVPKKAETISNKLFFTHHPKRQTEFAVGQIRQARAE
                     "
     gene            complement(8517..8708)
                     /locus_tag="ACJJDE_000519"
     CDS             complement(8517..8708)
                     /locus_tag="ACJJDE_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540499.1"
                     /translation="MLPTRSVSSLLLGEYLEFEENGTKIAAEIGSAWHFLDAACWISI
                     NGKYYAGNRIVWFAKKAES"
     gene            complement(8741..9277)
                     /locus_tag="ACJJDE_000520"
     CDS             complement(8741..9277)
                     /locus_tag="ACJJDE_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540500.1"
                     /translation="MKKIIDSKVRETNFNQAWRVIRAMQIDNISDEQVVIVRMSCYLK
                     KDEIFKNIERYGYQSSDIKKISPPFPLNILPVPKPYYFYLYDTHLNQIYDLAWSCNDF
                     LMFEIFILDRESIKYIDKDKLFKSGETLYSNFKSIKNQCKNYFFCGFDFDAPYFKSGV
                     SQVADYNFVPDAFSLFFI"
     gene            complement(9445..9603)
                     /locus_tag="ACJJDE_000521"
     CDS             complement(9445..9603)
                     /locus_tag="ACJJDE_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540501.1"
                     /translation="MKTFEKTWSAQYRDMEISVRNFWNLERTGAEVYINGRRVYHNEA
                     EMASASLR"
     gene            complement(9760..10179)
                     /locus_tag="ACJJDE_000522"
     CDS             complement(9760..10179)
                     /locus_tag="ACJJDE_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540502.1"
                     /translation="MSFGYLIATSQPCELLTKSRGETFSLIMDKMDLWIYFRFCEGNI
                     YTIRKNETESCLTERGGEWLKHIYEFNRGSFIFSYVLLKKRESEENFAEIVLKSIKNN
                     KILTVKVRSGLHFDLRNIYRIEMYSGLNLNQYGVASP"
     gene            complement(10237..10602)
                     /locus_tag="ACJJDE_000523"
     CDS             complement(10237..10602)
                     /locus_tag="ACJJDE_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540503.1"
                     /translation="MEKPLLTPPFFLFEDVSLDIFQGLSELEKKIEPQDLMDDVYRAF
                     DSVGNILNFRIVEKEQKGFWVSTKIKTVVFDSADMSSDDLFLKCLQSSYKAYFETEPA
                     GLDKRQLMKTLIQKCGFSC"
     gene            complement(10584..11129)
                     /locus_tag="ACJJDE_000524"
     CDS             complement(10584..11129)
                     /locus_tag="ACJJDE_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540504.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQAFEDQVFHTRADAPMQLA
                     ELSQKEMKETEGAFLPLAILGGAAIGMWTQHGFSYATTGRPASVRDVAIAGGLGAIPG
                     GVGAAGKVVSFAKYGREIKIGNNMRIAPFGNRTGHPIGKFPHYHRRVTDNTGKTLPGQ
                     GIGRHRPWESKSTDRSWKNRF"
     gene            complement(11292..11565)
                     /locus_tag="ACJJDE_000525"
                     /pseudo
     CDS             complement(11292..11565)
                     /locus_tag="ACJJDE_000525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220648.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(12127..12600)
                     /locus_tag="ACJJDE_000526"
     CDS             complement(12127..12600)
                     /locus_tag="ACJJDE_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540505.1"
                     /translation="MKKQITAAVMMLSMIAPAMANGLDNQTFENQVFHTQADAPMQLA
                     ELSQKEMKETEGAFLPIVAGALMGGAISAWANHGISKIKTGQFASTRSTLAATAGGMI
                     GGGYSSAMLRGAGITTSVFARSAWKGGNAIPNAVIRANGAALNQSSSAAMGKHRR"
     gene            complement(12643..13512)
                     /locus_tag="ACJJDE_000527"
     CDS             complement(12643..13512)
                     /locus_tag="ACJJDE_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="meta-pathway of phenol degradation family
                     protein"
                     /protein_id="HGG7540506.1"
                     /translation="MKRIFLPALPAILPLSAYADLPLTIEDIMTDKGKWKLETSLTYL
                     NSENNRAELAALVYIQTGATSFIPIPTEIQENGSNTDMLVGTLGLRYGLTGNTDIYGS
                     GSYLWHEERKLDGNSKTRNKRMSDVSLGISHTFLKDDKNPALISFLESTVYEKSRNKA
                     SSGKSWLIGATTYKAIDPIVLSLTAAYRINGSKTLSDGIRYKSGNYLLLNPNISFAAN
                     DRISLTGGIQWLGKQPDRIDGKKESARNTSTYAHFGAGFGFTKTTALNASARFNVSGQ
                     SSSELKLGVQHTF"
     gene            13676..14599
                     /locus_tag="ACJJDE_000528"
     CDS             13676..14599
                     /locus_tag="ACJJDE_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7540507.1"
                     /translation="MKKRNNPLPLLNGVKPSYLVLPHEKQFYGLPLLHFLCIRFPFVG
                     ADDWRRRLNSGFVVGSDGAALDEHTLFEPGKVMFYYRETSSEDEPRIPFEEKILHIDE
                     HLIVVDKPHFLPVIPSGRFLRETLLTRLRLRPELQHLNVEDITPLHRLDKDTAGVMLL
                     SHNPATRGAYQTMFQNKTVWKTYEALAPTRTDLPYPLDVVSRLVRGEKFFTTQEAEGE
                     PNAHTTVELIENRGEFSLYRLTPHTGKKHQLRVHMMGLGMPLLNDALYPVPSEAGSED
                     YRKPLKLLAKKIAFADPLSGRERVFCSGFCL"
     gene            complement(14677..15318)
                     /locus_tag="ACJJDE_000529"
     CDS             complement(14677..15318)
                     /locus_tag="ACJJDE_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7540508.1"
                     /translation="MQKPETIHIPGPAGILETIHIPSEQVPARGVAVINHPNPLQGGT
                     NTNKVIQTAAKALSKLGFHCYLPNLRGVGGSEGTHDYGHGETQDCIAVIDYARAQHPE
                     APEFALSGFSFGGYVATFAAQARIPDLLLLIGAAVCHYTGRPEPSAVPNVAKTLMIHG
                     AEDEVVEIGKALKWAEPQDLPVITIAGSTHFFHGKLIVLRDTILRFAPVCLNG"
     gene            complement(15373..16164)
                     /locus_tag="ACJJDE_000530"
     CDS             complement(15373..16164)
                     /locus_tag="ACJJDE_000530"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HGG7540509.1"
                     /translation="MARHPYRRLRPAKSSFPEVGISEEGNIRSLHLGSDTIQSSMNLD
                     HPSELVLSYSRAMMGWLLFTDALPQHITQIGLGGGSFARWIDTYLPDTRQTAVDINPQ
                     VIAIARSLFELPFEGEKFEIIEADGAEYIKVFRHNTDVILVDGFDGEQIIDALVEEPF
                     FRDCRNALSSDGIFVTNWWSGDKRYQRFIERLLSVFEGRVLELPAESHGNVAVMAFQS
                     SPKEQNIDKLKKRADKLSNAYGLDFHRMLADLKASNPNNGKHFHL"
     gene            16330..16405
                     /locus_tag="ACJJDE_000531"
     tRNA            16330..16405
                     /locus_tag="ACJJDE_000531"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16363..16365,aa:Thr,seq:tgt)
     gene            16547..17338
                     /gene="panB"
                     /locus_tag="ACJJDE_000532"
     CDS             16547..17338
                     /gene="panB"
                     /locus_tag="ACJJDE_000532"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003864 - 3-methyl-2-oxobutanoate
                     hydroxymethyltransferase activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HGG7540510.1"
                     /translation="MITVNTLQKMKAAGEKIAMLTAYESSFAALMDDAGVEMLLVGDS
                     LGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAEL
                     MAAGAHMVKLEGGVWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQA
                     LLNDAKAHDDAGAAVVLMECVLAELAKKVTETVSCPTIGIGAGVDCDGQVLVMHDMLG
                     IFPGKTAKFVKNFMQGHDSVQAAVRAYVAEVKAKTFPAAEHIFAD"
     gene            17461..18297
                     /gene="panC"
                     /locus_tag="ACJJDE_000533"
     CDS             17461..18297
                     /gene="panC"
                     /locus_tag="ACJJDE_000533"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HGG7540511.1"
                     /translation="MQIIHTIRELRAWRKNAGKVAFVPTMGNLHEGHLALVREAKKRA
                     DSVVVSIFVNRLQFGQGEDFDKYPRTLQQDADKLEAEGVAVVFAPDEKELYPNVEQRY
                     NVEPPNLQNELCGKFRPGHFRGVATVVSKLFNIVAPDVACFGKKDYQQLAVIKGLTED
                     LNFDVEIVPVDTGRAEDGLALSSRNQYLSAAERDEAPRLYCELKAVAESLAQGSLDYA
                     GLERQAADHLTAAGWVVDYVEIRRADTLEVARAGDKKLVVLAAARLGTTRLIDNLEIK
                     LP"
     gene            18462..20306
                     /locus_tag="ACJJDE_000534"
     CDS             18462..20306
                     /locus_tag="ACJJDE_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7540512.1"
                     /translation="MLPNRFKMLTVLTAALIAGQVSAAGSGAGDMKQPKEVGKVLRKH
                     QRYSEEEIKNERARLAAVGERVNQIFTLLGGETALQKGQAGTALATYMLMLERTKSPE
                     VAERALEMAVSLNAFEQAEMIYQKWRQIEPIPGKAQKRAGWLRNVLRERGNQHLDGLE
                     EVLAQADEGQNRRVFLLLAQAAVQQDGLAQKASKAVRRAALKYEHLPEAAVADVVFSV
                     QGREKEKAIGALQRLAKLDTEILPPTLMTLRLTARKYPEILDGFFEQTDTQNLSAVWQ
                     EMEIMNLVSLHRLDDAYARLNVLLERNPNADLYIQAAILAANRKEGASVIDGYAEKAY
                     GRGTEEQRSRAALTAAMIYADRRDYAKVRQWLKKVSAPEYLFDKGVLAAAAAVELDGG
                     RAALRQIGRVRKLPEQQGRYFTADNLSKIQMLALSKLPDKREALRGLDKIIEKPPAGS
                     NTELQAEALVQRSVVYDRLGKRKKMISDLERAFRFAPDNAQIMNNLGYSLLSDSKRLD
                     EGFALLQTAYQINPDDTAVNDSIGWAYYLKGDAESALPYLRYSFENDPEPEVAAHLGE
                     VLWALGERDQAVDVWTQAAHLTGDKKIWRETLKRHGIALPQPSRKPRK"
     gene            20447..21028
                     /locus_tag="ACJJDE_000535"
     CDS             20447..21028
                     /locus_tag="ACJJDE_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein LolB"
                     /protein_id="HGG7540513.1"
                     /translation="MKHTVSASVILLLTACAQLPQNNENLWQPSEHTRSFTAEGRLAV
                     KAEGKGSYANFDWTYQPPVETININTPLGSTLGQLCQDRDGALAVDGKGNVYQAESAE
                     ELSRQLVGFKLPIQYLHIWADGRRVAGAPYRILPDGILEQYGWTVGRTADSGGQVRTL
                     QLNNGNLNIRLVFTEIGMPSETETLERCAARTR"
     gene            21038..21883
                     /gene="ispE"
                     /locus_tag="ACJJDE_000536"
     CDS             21038..21883
                     /gene="ispE"
                     /locus_tag="ACJJDE_000536"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HGG7540514.1"
                     /translation="MNIADGRQAFPAPAKLNLDLRITGKREDGYHNIESIFCLIDLQD
                     TVYLKLRDDGKIILHNPVDGMPQEVDLSYRAASLLQKYARNPAGVEIWLDKKIPTGAG
                     LGGGSSDAATVLLVLNRWWQCSRTTQQLIDLGATLGADVPFFIFGKNAFASGIGEKLI
                     GMDIPKQWYVIVKPPVHVSTAKIFTHEGLTRNSASSIMPTFQNLQPFRNDMQAVVFKE
                     YPEVWKAYSELSRYGFALMTGSGACVFTACQDRDSAYNIYRQVSDLYEAYLAEGLSKH
                     PWLSV"
     gene            21891..21966
                     /locus_tag="ACJJDE_000537"
     tRNA            21891..21966
                     /locus_tag="ACJJDE_000537"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21924..21926,aa:Gln,seq:ttg)
     gene            22133..23116
                     /locus_tag="ACJJDE_000538"
     CDS             22133..23116
                     /locus_tag="ACJJDE_000538"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0006015 - 5-phosphoribose 1-diphosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009156 - ribonucleoside monophosphate
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009165 - nucleotide biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HGG7540515.1"
                     /translation="MAAYDSLMVFTGNANPELAQRVVRHLDISLGNASVSKFSDGEVA
                     VELLENVRGRDVFILQPTCAPTNDNLMEILTMADALKRASAGRITTAIPYFGYARQDR
                     RPRSVRVPISAKLVANMLYSAGIDRVLTVDLHADQIQGFFDIPVDNIYATPILLNDIK
                     QQRIENLTVVSPDIGGVVRARAVAKSLNADLAIIDKRRPKANVAEVMNIIGDIQGRTC
                     LIVDDMIDTANTLCKAAVALKERGAERVLAYASHAVFSGEAVSRIASSEIDQVVVTDT
                     IPLSEAAKNCDRIRQVTIAGLLAETVRRISNEESVSYLFNEEVMTGSMLLP"
     gene            23183..23755
                     /locus_tag="ACJJDE_000539"
     CDS             23183..23755
                     /locus_tag="ACJJDE_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HGG7540516.1"
                     /translation="MTYEIQASVREAQGTGASRRLRREGQIPGILYGEGQEPVAIAVD
                     HKTVFYALEKESFHTALIKLSLNGETKDVIVRDFQMHPFRREVQHIDFQAVKADQLVR
                     IRVPLHIVNAENSQAVKLQGGRVSLLNTSVEVVALPANIPAFLDLDCAEVVAGDILHL
                     SDIKLPEGVESVSLKRNENLAVATVTGKKR"
     gene            complement(24187..24405)
                     /locus_tag="ACJJDE_000540"
     CDS             complement(24187..24405)
                     /locus_tag="ACJJDE_000540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540517.1"
                     /translation="MRAVEICGFFFAGDEGAGSGALQVEIGGGFARPIELITFARTGK
                     VFCAEDEFELFKVNLVFTKDFGKELFEF"
     gene            24409..26037
                     /locus_tag="ACJJDE_000541"
     CDS             24409..26037
                     /locus_tag="ACJJDE_000541"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7540518.1"
                     /translation="MFIEAENLEALKILQKSYAGSVKMIYIDPPYNTGNDSFVYPDKF
                     SESREEYARRVGDTDDAGYLKRDGVFQGAWRKNGKDSGHYHSNWLSMMLPRLHLAKTL
                     LREDGVIFISIDDNEQAQLKLLCDEVFGAENFVGQFPWRKRTAKSDVPFGVSADYEYL
                     LAYARSNAFIASIDAEERRYFETDDFPNRPWRTHDLTTQRNASERPNSFFTMVNPKTG
                     KEYPANPNATWRVTKDTFQEYYNAGKIVFPDDYDFLKIKNPVMRYFKDDDMKKDGERF
                     GRKAVSTRLPENVGMSLNGTKEITELFKSKLFDFPKPSSLIKYLLQILHVSDGLILDF
                     FSGSGTTAHAVMQLNAEDGGNRRFICVQLPEETDEKSEARKAGFDTIAEIAKERIRRA
                     GRQISDGLQDGSETDTGFKVFKLAESGFKQWRQPEQSDTEALQRELSLNIDSVLSETS
                     SENLLYELMLRMGLKLTCKVSFLDDVYFVEDEDTGGLYAFLLKRVDQGLIDAVLAKHP
                     AKVAALDRLFEGDDALKSNTVLQMKDAGVMFECV"
BASE COUNT         6513 a         6138 c         6765 g         6782 t
ORIGIN      
        1 ttcaccggta ttttcttacc gtattctgcg attgcctgtc ggaaaatgcc gatcaacctg
       61 cctataacgg cattttcgcc aaattcgttc agacagtttt ccctaagtcg ggcaggttca
      121 aaatcagagt ggtgttcata cattttgatg agtgcgtcgg caagggcatc gtcgtcgtca
      181 acaggaacca aatatccgtt gccgtctgaa acaatagatt ccgcaccgcc gcagcgtgtt
      241 gcaatgacgg gcaatccttg ggacagtgct tcgatataga ccacgccgaa ggtttcggtg
      301 cggctggcaa ggacgaatgc gtcgctgttc ctcatcaaat ccaagactgc ttcgggctgc
      361 aatgcgccca aaaatgtaac ggcatgggta atgcccaagt ctgccgcctg ctgtttcagc
      421 cgctgttctt cctgtccgct gccgccgatg tttagacgca gttgcgggca ttgtgccaac
      481 gcccgggcaa aggcagtgag caggacatcg tgtcctttga gacggcgaag gtgcgagacg
      541 gtgcagaaca cgaaatgcgg tttgttgttt ttttctcttt gttcaaacgg tcggttgaat
      601 attccgccca gtatgttggg gaggtactgc cattcgcagc cgtatttgtg ttgcaggacg
      661 tgtgcgaaat ggcggctgat ggcgagacgt gcggcggcgt gcgccgccgc atttttcata
      721 ggctgccatt ggtggggacg gatcagaccg cgcgtgatgg tgctgctgtg tttcgtgacg
      781 acatagggga tgccgtattt ttgggaaatc ttgaaggcaa gtatgccggc atagttcata
      841 cagtgggcgt gaatcaggtc gggcagcccg ttttcgcgga tgtagtgttt gaaagctttc
      901 aaacccgcac acacccagcg gatgcagtcg atgtcgatga acggaaagcg ggggaagaaa
      961 tatatgccgt gccatgcata gatgtccaaa ccgctttgcc gatattttgc aaaaccgtaa
     1021 ggccggtcag gatgcttgct gtttctttcc gcaagtagcg gaacatcggt gcaagcacgg
     1081 cggttttgat gcctttcctc tgcaatgcca gtgcctgatt ttgaaaaaaa tcccgtccac
     1141 atcctgttcg gattgcggat accatgaggg gatgacgagg acgtgcaacg gttcggacat
     1201 aatatgattc cgtatcggaa agacggttat tataagacag acgcagaccg aatatttaaa
     1261 ttgttgcctt acgctaatgc aatttagcgc gccgatatgc tagattggcg gttttatgag
     1321 tgaggatacg gatatgttgc gttctatttt ggcggcttcc ctattggcgg tatcttttcc
     1381 ggcagcggct gaagcattga attacaatat tgtcgaattt tccgaatcgg cgggtgtcga
     1441 ggtggctcag gatacaatgt ccgcacgttt ccaagtggcg gcggaaggac gggacaaaaa
     1501 tgccgtcaat gccgagtttg ttaaaaaatt caacagtttt aacagaaaat tgaaaaacgg
     1561 cagctttaaa accgaattgg tatcgcgcag tgcgatgccg cgctatcaat ataccaacgg
     1621 cagacgcatt caaacaggct gggaggagcg tgcggaattt aaggtcgaag gtagggattt
     1681 tgatgcgttg aaccgtttta ttgctgatgt tcagacggat gcttcgcttg aatataccga
     1741 tttcagcgtg tcgcgtgaac gccgaaacga ggtcatcgat caggtcagca aggatgctat
     1801 tttgcgtttt aagacgcgtg ccgaaaaact ggcgggcatt ttgggtgcgt ccggttataa
     1861 aatcgtcaaa ttaaatttgg gacacatcgg cagccatatc gcgggagggg gagctgctca
     1921 ggcaaaaatg cttcgtgcca tgccgatggc ggcaagcgtc aatatggagg gtgcggattc
     1981 tgccgcgcag ggtgtggagg aaatcagcat cagcgtcaat gggacggttc agttctaacc
     2041 acggataaac aggtagatgc cgtctgaaac cggatgatac ggttcagacg gcatttatat
     2101 ttcaggcttt aggcagggta acgccggttt gccccatata tttgccgttg cggtctttgt
     2161 atgaggtttt gcagatttcg tcgctctcga agaagaggac ttgcgccacg ccttcgccgg
     2221 cgtagatttt ggcgggcagg ggggtggtgt tggaaaactc gagggtaacg tagccttccc
     2281 attccggctc gaacggggta acgttgacga tgatgccgca gcgggcgtag gtggatttgc
     2341 ccaagcagac ggtcaggacg ttgcgcggga tgcggaaata ttcgaccgtg cgcgccagtg
     2401 cgaaggaatt gggcgggatg atgcagcagt cgtcttcaac ggtaacgaag tttttcgggt
     2461 cgaagttttt gggatcgacg atggtgctgt tgatgttggt gaagatttta aattcgtttg
     2521 cgcagcggat gtcgtagccg tagctggacg taccgtagga gatgatgcgt ttgccgtcgg
     2581 cttctttgat ttggttcggc tcgaaagggt cgatcatgcc gaattcttcg ctcattcggc
     2641 gtatccattt gtcggacttg atgctcataa tgttttcctt gtttcttgcg gtgttcggac
     2701 aaagcattcg ggaatgccgt ctgaaaacgg ggcttatttg tttttgggca gtttcacttc
     2761 ttgaatcatg ccgttttcac atttcataat gaagagggtt tcgccgtttt gcgagacggt
     2821 aaacctgccg tgtgccaggc cttttttgaa cgtgcccgag agtaccatgt tgcggaattt
     2881 ggtactgtcg gaattgaacg gttcgataaa tatttcgcgg ttggcggaaa cggtataaac
     2941 gccttgtccg tcgaatttgc catttttaaa cgaaccggta taaccgcgcc cgtcccggca
     3001 acgccatatg cctttgcctg aaggaagccc gtcttttccg actccgccgt cgtaggtgca
     3061 gccgggttct tgataggaag tcagaacggc ggccgaagtg gggagggcga acatcatggc
     3121 gggcagtagg aatgcgagat gtttaagcat aagggttatt ccattggatt ttggttgacg
     3181 gtattttgtc gtgaaaaagc cgtctgaaaa atcaatcttg ccagccgccc aaataggaaa
     3241 ccagttcttc caacatggtg ctgacggatt ccgccatcag aatttgcgag gcgaaggcaa
     3301 ggccggcggc atcgtcgccg ttgctttcgg cttcttcctg caatacgtcg aggtattgga
     3361 tgcgcttgag tgtgaagtct tgagtgagga taaaggcaat ttgttcgcgc cacaccaagc
     3421 ccagttgggt aacggtttta ccgtttttga cgtgttgaac cacttcgtcg gcggttaaat
     3481 cttgtttgga tactttgacg acgggaacaa tatcgcccgt acctttgagt tcgcaatcgc
     3541 tgtctaattc aaaaccgcct tcgcaatgcc cttgcaacag ccagccggtc atcaaggaag
     3601 agggcgattg cttggtattc ggcagcgagg cttccaaacc gcccaaagct tcgcgcagct
     3661 tggtcaggat gttttctgct ttggcggaag ccgcgttatt gacgagcagg tagccgtggc
     3721 gggtgttaaa caccgcttct gtacggctgc tgcgggtaaa cgctcggggc agcaggtcgt
     3781 ctgtaatttg ctctttaagc tcttgttttt ctttacggcc gacattgcgg gcttcattgt
     3841 tttggatttc cgctaccttc tcttccaaaa tatcgcggat gacgccggca ggcaggactt
     3901 tttcttcttt tttcagggcg acgcgcaagg taaagtcggc agggaaaacg agttcgggag
     3961 agaacgaaac cggtgcggca aagccttcgc tgaaccagtc taagccttgg caatgggtaa
     4021 attcagcttc agcaagtttg tcggcaagta cgtctgcctc aggcagcttt tctttgttga
     4081 gcggataaaa actaatctgc ttgaaccaca taatgtttcc tgttgtttga aatgtcggga
     4141 attatttgct gaattgtttt ttcacactga ctttggtttt cttcttgaag cggtttttct
     4201 cttctttgcg gtcttcgcgt ttctcaatac ggttgctcag gctgacacgg cgcagcggtt
     4261 ttttcttcgg tttgtcttcc gcattttcat aggggttttc tgaaacattg tattgaattc
     4321 tgagcggcgt gccttgcaga ttgaaggctt tgcggaatgt ttgggtcagg tagcgcgtat
     4381 agctgtcgga aatcgcgtgc agcgaattgc cgtgtaccac aattacggga gggttcatgc
     4441 cgccttggtg ggcataacgc attttcggac gcaccaagcc ggcacgcggc ggttgctgac
     4501 gctcgattgc gctttgcagg acgcgcgtga ttttcggcgt cggcatctta atcatcgccg
     4561 cgttgtaggc agcctgaatg ctgtcaaaca aaccgtctat accgcgctct ttcaatgcgg
     4621 aaataaagtg gaacttggca aaatcgagga aatacagttt gcggttgata tcgcgtttca
     4681 cttgctcgcg acgttcttcg ctgatgccgt cccatttatt gaccgccacc accaaagcac
     4741 ggcctgcctc caaagcgaaa cctgcaatcg tcgcatcttg gtcggcgatg tcctgctgcg
     4801 cgtccaatac caaaacagcg acgtttgccg cttcaaccgc ctgcatcgct ttgataacgg
     4861 agaatttttc cactgcttca tccactttgc cgcgacggcg cacacctgcg gtatcgatga
     4921 tggtaaacgg tttgccttcg cgctcgaaat cgatatggat actgtcgcgc gtcgtgccgg
     4981 ccatatcgaa ggcaatcacg cgctcttcgc cgagaatggc gtttaccagc gtggatttgc
     5041 cgacgttcgg acgaccgatg acggcaaaaa cgggatgttt tgcatcggct tcttcgactt
     5101 ccggctcggg gaagttttct aaaatttctt caatcaggta atacacgccg tcgccgtgcg
     5161 caccggaaat aacataaggg tcgcccaaag caagttcgta gaactcggcg gcaagcacgg
     5221 ccctgttgcc gccttcgcct ttgtttaccg ccagataaac agggcgcggg ctttggcgca
     5281 aacggtcggc aatgattttg tcttgcgggg tcagaccggt gcggccgtcc accaaaaata
     5341 cgacggcatc ggcttcatcg acagcctgca aggtttgttt tgccatttcg tgcaaaatgc
     5401 cgctgtccac aaccggctcg aaacctccgg tatcgatgac caaataaggt ttgctgccga
     5461 ctttgccgtg tccgtaatgg cggtcgcgcg tcagaccggg caggtcgtgt acgagcgcgt
     5521 ctttggtgcg cgtcaaacgg ttgaataaag tagatttgcc gacgttgggg cggccgacaa
     5581 gcgcgatggt tggtttcatg attgggtctt tctgtgtcaa gtgccgttcg ggagaactga
     5641 acacaagcag gtgtccgttg ggacacggca gatggtttta cgggaattgc cgtaggatag
     5701 tgttgtctga aatgccgtct gaagagaggg tggcatttca gacggcattt atttcagcga
     5761 atcgagtttc atttgaacca attcacgacc gacagaatct tgaggcattt tttctaaagc
     5821 ctgaccgtag ttttttaagg cttcctggct ttttccctgt gcggcataga catcgccttt
     5881 ggtttccatc agcagggggg agaagtccgc ttcaaccggc gtgtcgagcg cggcaagcgc
     5941 ggcatcgtat tttttttgtt gcaacaacac aacgcccaga cgctgcgccg ccaacgcttg
     6001 aatcaggctg tctttttggt tggacaacac ccatttcaaa tggccttcgg caacatcgta
     6061 acgctgcgcg tcaaattcgg ttgccgccgc catcagcgtg gcttgggcgg cggaaataga
     6121 atgcgggtag ctttgttgga gtttggtcaa ttcggcatta atttcgcttt gcggggcttt
     6181 gttttgcgcc ttttccacga tgtttgccag caccgccgcc gcttcctgat tttgggaagc
     6241 cgcacggttt tggtaaaccg tgtatcccaa gtagccgagt gctgccaaaa tcagcagggc
     6301 aaacagccat ttgcccgtgg ttttccaaaa atatttaaag ttgtctaact cttgttgttc
     6361 ttcgagatgg gctgccattt atgcgttctt ccattgttgt aaagtatggg ttaaatcctc
     6421 ggcggcgaca gtttgctgac cgtgtgcgcc gttcatgtct ttgagcgtaa ccgtaccgtt
     6481 cgccagttcg tcttgcgcga caatcagggc aaagcgcgcg ccgctgttgt cggctttttt
     6541 catttgcgct ttcaggcttt gatagccgga atgctgcatt acattgaaac cttgcgcgcg
     6601 caaggcttgc gcgtatttca tcacctgcaa gtccgccctt tcgccttggt gcattgcata
     6661 gacatcaggc gcagcgttca cttccagcga gccgtattcg ctcaccaaaa gcagcagccg
     6721 ttcgatgccc atcgcaaagc cgatggacgg cgcaggtttg ccgccaagtt cctcaatcaa
     6781 accatcgtaa cggccgccgc cgcacacagt tgcctgcgcg ccgagtttgt cggtcgtcca
     6841 ctcaaaaacc gtctgattgt aataatccaa accgcgaacc aagcgcggat tttcaatata
     6901 ttgaataccc aaaccatcca acatcgcctt gaagcgtgca tagtggtttt gcgaagcctc
     6961 gcccaagtaa tccaccaaac gcggcgcggc gttgcagatt tcctgcaaat cagggttttt
     7021 cgtatctaaa acgcgcaaag gattggtttt cagacggcgt ttgctgtctt catccaattt
     7081 atcttcataa cgggtcagat attcaaccaa tgccgcacgg tgtgccgcgc gttcctcacg
     7141 gttgcccaag ctgttgattt ccaaagtcag gtattcgcga atacccaatt tttcccacaa
     7201 gtcggcagac atcgcgatga tttccgcatc aatatccgga ccttcaaaac ccaaagcttc
     7261 gataccgacc tgatggaact gacgataacg gcctttttgc ggacgctcgc ggcggaacat
     7321 cggccccata taccacagct tttgcgggct gttgtagaga aggttgtgtt cgaccaccgc
     7381 acgcagacaa gaagccgtac cttcaggacg caggctcaaa ctcaaagaat cgtttgaatc
     7441 ggaaaaggtg tacatttcct tgccgaccac atcggtttct tcgccgatgg agcggacaaa
     7501 caaaccggtt tgctcgacaa tcggcgtacg gatttgctgg tagccgtaag cgcgcgtcca
     7561 acggtttacc gtatcttcaa acacctgcca aaacgcagcc gtcagtttga aatctttttg
     7621 ttcgacaggt aaaaggtcgt tcataccttt tacagattga attttttgtg ccatttcaat
     7681 atgggataag cgaaaatcaa atagttgggc attatagctg atttttaagg gcttgtgagg
     7741 atagagatgg tttgcggacg ggtaaaaatg ccgtctgaaa cagttttcag acggcatttg
     7801 acttactctg cacgtgcttg cctgatttgt ccgactgcaa actctgtctg ccgcttggga
     7861 tgatgtgtga aaaacaattt atttgaaatt gtctcggctt ttttcggcac gaccgccaaa
     7921 atcttacctg ccaaatttcc ctcacgggtt tgccaagcat ccaaaaactg cgccctgctc
     7981 attgaaacat gccccagcga cgggtcggca agcaaaaccg tattgccgtc tatcccgcgc
     8041 aataccgaga aatgatcatc cttgcggtat ttcagataca cgatgacggg gattttcaac
     8101 tgtgcgagct gctcgaaaga cagggcatag cctttcgctt caaaacccaa atctggcata
     8161 atgcgccgca tatcctcaaa cgacgcgcgc atctgctcct tatccagctt tttcaacact
     8221 tcttcttccg tcagcgtttg cccgtaaaaa ttgttcaaaa gcgtcgccac cgaagccgcc
     8281 ccacaggaaa aatccaaatc ctgctttaca atattgaaat cccgccgcgc tttccaactc
     8341 tgcactttga tttttccgta aacaacagga ttatcgttaa acatcggtgc agcattcaaa
     8401 cgataagata aagaaacgac aacacacgcc aacagaaaaa catatttgaa cttcatcata
     8461 ttgtccacat aaagggcagc ctgaaaatct ttcaggctgc ccttgtcaaa ttattcctag
     8521 ctttcggctt ttttggcaaa ccaaacaatc cgattacccg cataatactt tccatttatt
     8581 gaaatccaac aagccgcgtc caaaaaatgc catgcactgc cgatttccgc agcaatcttt
     8641 gtaccgtttt cttcaaattc caaatattca cccaataata aacttgaaac agaacgcgtg
     8701 ggcagcaagt gcccacccta cgcctattca aataatttga ttaaataaag aataaagaaa
     8761 atgcatcagg aacaaaatta taatctgcca cctgactcac accgctttta aagtaagggg
     8821 catcaaaatc aaaaccgcaa aaaaaataat ttttgcattg atttttaata gatttaaaat
     8881 tcgaatatag tgtttctcca gatttaaaaa gtttatcttt atctatatat ttgatgcttt
     8941 ccctatccaa aataaatatt tcaaacatta aaaaatcatt acatgaccaa gccaaatcat
     9001 aaatttgatt caaatgggta tcataaagat aaaaataata aggtttggga acaggtaaaa
     9061 tatttaatgg aaaaggagga ctaattttct taatatctga tgactgatat ccatatcttt
     9121 ctatattctt aaaaatttca tctttcttaa gataacaaga cattctgaca atcacaacct
     9181 gttcatcgga tatattatct atttgcatgg cgcgtataac acgccatgcc tgattaaaat
     9241 tagtctccct taccttagaa tctattatct ttttcaaaga tgaaaatgcc ccttatcttg
     9301 aactctccag ttagaacctg gaagtttcgt acctcttaaa tgtgtattaa tatttcttat
     9361 agtttcatta aaatgccacg cgctgccgat ttcaacggta attttcgtac cgctttcttc
     9421 aaattccagg tattccccca ttagctaacg caaagaagca gacgccattt cggcttcgtt
     9481 atgataaacc cgccttccgt tgatatagac ttccgcccct gtccgctcca aattccaaaa
     9541 attccgtact gaaatttcca tatcccgata ttgtgcagac catgtttttt cgaaggtttt
     9601 cataaaattt cctatacctg tccaatcggc acatatcaat tgcattatta tagtggatta
     9661 acaaaaatca ggacaaggca acgaagccgc agacagtaca aatagtacag aaccgattca
     9721 cttggtgttt cagcacctta gagaatcgtt ctctttgagc taaggtgagg caacgccgta
     9781 ctggtttaaa tttaatccgc tatacatctc aatacgataa atattcctta agtcaaaatg
     9841 caagcctgac cgtaccttaa ctgtcaaaat tttattattt tttattgatt ttaaaacaat
     9901 ttctgcaaaa ttctcttcgc tttctctctt ttttagaagc acataagaaa aaataaaact
     9961 tccccgatta aattcataaa tatgtttcaa ccattcgcct cctctttctg taagacaaga
    10021 ttcagtttca ttcttcctta ttgtataaat atttccttca caaaatctga aataaatcca
    10081 taaatccatc ttatccataa ttaaagaaaa agtttcacct cgagattttg tcaacaattc
    10141 gcaaggttgc gatgttgcaa tcaaatagcc gaaagacatt ttttacctca tacatggtcg
    10201 aaatcagttt ctgttagttc agaatccatt ttttcgtcaa caactgaatc cgcatttttg
    10261 aattaacgtt ttcatcagct gccgtttatc taaaccggca ggttcagttt caaaataagc
    10321 cttatatgaa gactgtaagc atttcagaaa aagatcatca gaagacatat ctgccgaatc
    10381 aaatacaact gttttgattt tggtacttac ccaaaaccct ttttgctctt tttctactat
    10441 acggaaattc agaatatttc caaccgaatc aaaagcacgg taaacatcat ccatcaaatc
    10501 ctgcggctct attttctttt ccaattccga caatccttga aatatatcca aagacacatc
    10561 ttcaaataga aaaaaaggag gagttagaag cggtttttcc atgatctgtc cgtagatttt
    10621 gattcccaag ggcgatgacg accaattccc tgtccaggca aagtcttgcc cgtattatcc
    10681 gtaactcgac gatgataatg gggaaatttt ccaataggat gacctgttct attaccgaaa
    10741 ggggctatcc gcatattatt gccgatttta atctcacgtc catatttagc aaaggaaaca
    10801 acctttcctg cggcgcctac accaccagga attgcgccta atccgccagc aatagcaaca
    10861 tctctaacag aagctggtct gcctgtcgtt gcataactaa aaccatgctg tgtccacata
    10921 ccaatggcag caccacccaa gatagccaat ggaagaaacg ccccctctgt ctccttcatc
    10981 tccttttgag aaagctccgc caactgcatc ggtgcatctg cccgcgtgtg gaacacttgg
    11041 tcttcaaatg cctgattgtc caagccgttt gccattgcgg gggcaatcat agacagcatc
    11101 attacggctg cggtgatttg ttttttcata ataactcctt tggattacaa ggttggaaaa
    11161 tcaaagccct gcttagaacg tatgttgcac acccaatttc aataggtaaa tcagattgca
    11221 aatccagcaa tttgaatatt gtcattgttc cgtgcaaaag ggatttttat tgatgagttg
    11281 tgtactgggt ttcagcttgg ctttttagat aatcttttca caagaacata catcaatact
    11341 gtccaaaaaa aaaagatttg ataaatatat tgcaacatat tttattccac ctccatccga
    11401 aacagaaacc aatatatttt taattaatac atagctgatt attacattta ttattcctat
    11461 aatatataag gatcttgcca aaattttttt tgattttatt ttaggaatat ctcttatcca
    11521 tgctaaaata cagcccaatg tcgaaaagaa aataacagca aacactacct tacctcctct
    11581 cacttccaac caaaccgata gcaggtttgg ttggaagttg gtttatttat tatttaacgg
    11641 cgaatgtcag tgttcttacc cgtagaacct gcataaccat ttatgccacc agcaacagtc
    11701 cccactgcta cacctcgcat accattaatc agaattcttc ctattttttc gaatccacta
    11761 tttcttccaa agatgcagca aacgcaggtt gagcctagac ccaatctacg tttgctgccg
    11821 catctgatcc ctattgtttc ttatccttac atcttcctgc cttgtcaatc aaataaagac
    11881 agaagactat acaaaaactg accgacatac tgaaaatacc tatccccttc catgcaatct
    11941 ccgcaccatt gacccaatag attagactga gaaacaacaa agccacagta taaatcaacg
    12001 taaaaaatat tgcgtaaagc acaataaagg gaacttttat ctcacggttg ttttttataa
    12061 tatattcagc aacttgattt ccgaatatac ctgataaaaa atatagtatt agatcatcca
    12121 tttcgtttat cttctatgtt ttcccattgc ggcgctagaa gactgattta atgctgcacc
    12181 atttgcacga ataactgcat taggaatagc atttccccct ttccaagcag aacgggcaaa
    12241 aacactagta gtaatccctg caccgcgcaa catcgcactg ctatatccgc cgcctatcat
    12301 accaccagcg gttgcagcca aggtacttct tgttgaagca aattgccctg ttttaatttt
    12361 agaaatgccg tgattagccc aagcactaat tgcccctccc atcaaagcac ctgccacaat
    12421 aggaagaaac gccccctcag tctccttcat ctccttttga gaaagctccg ccaactgcat
    12481 cggcgcatct gcctgcgtgt ggaacacttg gttttcaaat gtctgattgt ccaagccgtt
    12541 tgccattgcg ggggcaatca tagacagcat cattacggct gcggtgattt gttttttcat
    12601 aacaactcct ttggattaca aggttggaaa atcaaaacct gcttaaaatg tatgctgtac
    12661 gcccaatttc agttcggaac tgctttgccc tgaaacgttg aaacgtgcgg atgcgtttaa
    12721 agccgtggtt ttggtgaaac cgaaacctgc gccgaaatgg gcgtaggtgg atgtgtttct
    12781 tgcggattct tttttgccgt ctatgcggtc gggctgtttg cccagccatt ggatgcctcc
    12841 ggtcaggctg attctgtcgt tggcggcaaa tgagatgttg gggttgagca gcaggtagtt
    12901 gcccgatttg tagcggatgc cgtctgaaag ggttttgctg ccgttgatgc ggtaggcggc
    12961 ggtgagggaa aggacaatcg gatctatggc tttgtaggtg gtggcgccga tgagccacga
    13021 ttttcccgac gaggctttgt tgcgcgattt ttcgtaaacc gtgctttcaa gaaagctgat
    13081 tagggcgggg tttttgtcgt ctttaaggaa ggtgtggctg atgccgaggg atacgtcgga
    13141 catccgtttg ttgcgggttt tgctgttgcc gtcgagtttg cgttcttcgt gccacagata
    13201 gctgccgctg ccgtaaatgt cggtattccc ggtcagtccg tagcgcaaac cgagcgtgcc
    13261 aacgagcata tcggtattgc tgccgttttc ttggatttcg gtcggaatgg ggataaacga
    13321 ggttgcgccg gtttggatgt aaaccagtgc ggcaagttcg gcgcggttgt tttcgctatt
    13381 caggtaggta agggaagttt ccagtttcca tttgcccttg tcagtcatta tgtcttcaat
    13441 cgtcaagggc aggtcggcat aagcggataa aggcaggatg gcgggcaagg cgggcaaaaa
    13501 gatgcgcttc atatttctcc tattgatatt aattcttatt taagaatagt aatgaatatc
    13561 cgataatttt gtctaaataa atttttaaat caaaaaaaac gatatatttg tttttatcaa
    13621 ttatgttttg atatgccgtc tgaaaagttt gtgaaaaacg gttacaatcc gccgcatgaa
    13681 aaaacgcaat aatcctcttc cgttgttgaa cggtgtcaaa cccagttatt tggtgctgcc
    13741 gcatgaaaag cagttttacg ggctgccgct gctgcatttt ctgtgcatcc gctttccttt
    13801 tgtgggcgcg gacgattggc gcaggcggtt gaacagcggt tttgtggtcg gttcggatgg
    13861 tgcggcgttg gacgaacata ctttgttcga gccgggtaag gtgatgtttt attatcggga
    13921 aaccagcagt gaggatgagc cgcgtattcc gtttgaagaa aagattttgc atattgatga
    13981 gcatttgatt gtggtggaca agccgcattt tctgcccgtc atccccagcg ggcgtttttt
    14041 aagggaaacg ctgctcacac gtctgcgcct gcgtcccgaa ttgcagcatt tgaatgttga
    14101 agacattacg ccgctgcacc gcttggacaa ggatacggca ggcgtgatgc tgctgtcgca
    14161 taatcctgcc acgcgcggag cctatcagac gatgtttcaa aacaaaacgg tatggaaaac
    14221 gtatgaggcg cttgcgccga caaggacgga tttgccgtat ccgctcgatg tggtttcgcg
    14281 tttggtgagg ggtgagaaat tttttacgac gcaagaggcg gaaggcgaac caaacgcaca
    14341 tacgacggtc gaactgattg aaaacagggg ggaattcagc ctttaccgcc ttacgccgca
    14401 tacgggcaag aaacaccagt tgcgcgtgca tatgatgggt ttgggtatgc cgctgttgaa
    14461 tgacgcgctc tatcccgtgc cgtctgaagc gggcagcgag gattatcgga aacctttgaa
    14521 gctattggca aaaaagattg cgtttgcaga tcctttgtcg ggtcgggaaa gggtgttttg
    14581 cagcggattt tgcctataat gagagggaac gcaaacccgt atcggcggat gccgccgata
    14641 cgggttttac attatcgatg ccgtctgaaa ggggttttat ccgttcaggc atacgggcgc
    14701 gaagcggagg atggtgtcgc gcaggacgat gagtttgccg tgaaagaaat gcgtggaacc
    14761 ggcgatggta atgacgggca aatcttgcgg ttccgcccat ttcagtgctt tcccgatttc
    14821 gacgacttcg tcttccgcgc cgtgtatcat cagcgttttg gcaacattgg gaacggcgga
    14881 cggctcgggg cggccggtat agtggcagac tgccgcgccg atgagcagca ataaatcggg
    14941 tatgcgcgct tgtgcggcaa atgtggcgac ataaccgccg aaggagaagc cggataaggc
    15001 aaattcgggg gcttcgggat gttgggcacg agcatagtcg atgacggcga tacagtcttg
    15061 cgtttcaccg tgtccgtaat cgtgtgtgcc ttcgctgccg cctacgccgc gaaggttggg
    15121 caggtagcag tggaagccga gtttgcttaa ggctttggcg gcggtttgga tgactttgtt
    15181 ggtgttcgtc ccgccttgga gggggttggg gtggttgatg acggcaacac cgcgtgccgg
    15241 tacttgttcg gacgggatat ggatggtttc taaaatgccg gcagggccgg gtatgtgtat
    15301 ggtttcaggt ttttgcataa tggtttcctc ttgattttcc gcatattccg atgcagccgc
    15361 gaagatggcg gcttaaaggt ggaaatgctt gccgttgttg gggttggatg ctttcaggtc
    15421 ggcgagcatg cggtggaagt ccaatccgta agcgttgctc agtttgtcgg cacgtttttt
    15481 gagtttgtct atgttttgct ctttggggct gctttggaag gccattaccg cgacattgcc
    15541 gtggctttcg gcaggaagtt ccaagacgcg cccttcaaaa acgctcaaca accgttcgat
    15601 gaagcgttgg tagcgtttgt cgccgctcca ccagttggtt acgaatatgc cgtctgaaga
    15661 gagtgcgttt cggcagtctc ggaaaaacgg ttcttcaacc agcgcatcga tgatttgttc
    15721 gccgtcgaac ccgtccacca aaatcacatc ggtgttgtgg cggaagactt tgatatattc
    15781 tgcaccgtct gcttcgataa tttcaaattt ctcgccctcg aaaggcaact cgaacaggct
    15841 gcgggcaatg gcgatgacct gcgggttgat gtccacggcg gtttggcgcg tgtcgggcag
    15901 gtaggtgtct atccagcgtg caaacgaacc gccgcccaag ccgatttggg tgatatgctg
    15961 cggaagagcg tcggtaaaca gcagccatcc catcatggca cggctgtaag agagtaccag
    16021 ctcggacggg tggtcgaggt tcattgagct ttggatggtg tcgctgccca agtgaagcga
    16081 acggatattg ccttcttcgg aaatgccgac ttcgggaaag ctggattttg caggacgcag
    16141 gcggcggtag ggatgtcttg ccatcggtgt gaacggtcgg tttgaaaggc agatatttta
    16201 tcagaatgcc gatggttgtc ctgcttcaaa ttaatttctt ttcaaataaa ttacttattc
    16261 ggatttgccg gggctttcgg ataaattcct tgccaaggtg cggcattgcc tgcataattc
    16321 gctttctttg ccggtatagc tcagttggta gagcacctga cttgtaatca gggggtcccg
    16381 agttcgactc ttggtgccgg caccagattt gacagtccga ttgtgtaaaa cagtcgggct
    16441 gttttgcatt tgcggcacgg tcggtggcag ggctgcgggc atttcactat aatagcccgt
    16501 ttcaaactga aaaggccgtc tgaaaagggc ggggtaacaa tatctgatga ttactgtgaa
    16561 cacactgcaa aaaatgaagg cggcgggcga aaaaatcgct atgctgaccg cttacgaatc
    16621 cagttttgcc gcgctgatgg acgatgccgg cgtggaaatg ctgctggtcg gcgattcttt
    16681 ggggatggcg gttcaggggc ggaaatcgac gctgcccgtc agcctgcgcg atatgtgtta
    16741 tcacaccgaa tgtgtagcac gcggtgcaaa aaatgcgatg attgtcagcg atttgccgtt
    16801 tggtgcatat cagcagagta aggagcaggc gtttgccgcc gctgccgaac tgatggctgc
    16861 cggcgcgcat atggttaaac tcgaaggcgg cgtgtggatg gcggaaacga ctgaattttt
    16921 gcaaatgcgc ggtattccgg tttgtgcgca catcggtctg accccgcaat ccgtgtttgc
    16981 tttcggcgga tataaagttc aggggcgcgg cggcaaggcg caggcgttgc ttaacgatgc
    17041 caaggcgcat gacgatgcgg gggcggcggt cgtgctgatg gagtgcgtac tggcggaact
    17101 ggcaaaaaag gtaactgaaa ctgtttcctg tccgactatc ggtatcggtg cgggtgtgga
    17161 ttgcgacggg caggttttgg tgatgcacga tatgctcggc attttcccgg gtaagacggc
    17221 gaaattcgtc aaaaacttta tgcaggggca tgatagtgtt caagcggcgg ttcgggcgta
    17281 tgttgccgaa gtcaaagcca aaaccttccc tgctgcggaa catatttttg cagattgaac
    17341 ggtttacatg cagcatgccg tctgaaagcc gtttcagacg gcattttgtt ttgccgtgcg
    17401 cggcgcgtat aatcggcgcg ttttgtcggg caggaagccc gaaagataag gattaccgtt
    17461 atgcaaatca tacataccat tcgagaactg cgcgcgtggc gtaaaaatgc gggaaaggtg
    17521 gcatttgtgc cgaccatggg caatctgcat gaagggcatc ttgcgcttgt gcgtgaggcg
    17581 aaaaaacgcg cggacagtgt cgtggtcagc attttcgtca accgcctgca attcggtcag
    17641 ggcgaggatt tcgacaaata tccgcgtact ttgcaacagg atgcggacaa gctggaagcc
    17701 gagggtgttg ccgttgtttt cgcgcccgat gagaaagaac tctatccgaa cgtggaacag
    17761 cgttacaacg tcgaaccgcc caatctgcaa aatgagttgt gcggcaagtt tcgtccggga
    17821 catttccgcg gggtggcgac ggtggtgtcc aagctgttca atattgtcgc gccggatgtt
    17881 gcctgtttcg gcaaaaaaga ctatcagcag cttgccgtga ttaaaggttt gaccgaggat
    17941 ttgaattttg atgttgaaat agtgcctgtc gatacggggc gcgcggaaga cggtttggca
    18001 ctctccagcc gcaaccagta tttgagtgcg gcggaacgcg acgaagcacc gcgcctgtac
    18061 tgcgaattaa aggctgttgc cgaatccttg gcgcagggca gtttggatta tgcaggtttg
    18121 gagcggcagg ctgccgacca tttgaccgct gcgggctggg tggtcgatta tgtcgaaatc
    18181 cgccgcgccg atacgctcga agtggcgcgg gcgggagata agaaactggt ggtcttggcc
    18241 gccgcccgtc tggggacgac gcgcctgatt gacaatttgg aaataaaact cccttaaacc
    18301 gcaagcgtcg ggaatgccgt ctgaagcgga tttgcgtttc agacagcatt tatttttttg
    18361 aacggggttt cgcaaatcta caaacgattc tgcttgtgat aaagttacgc ctgattatat
    18421 gccgtctgaa agttcggacg gatgtcggat aaaggatgat tatgctacct aaccgtttca
    18481 aaatgttaac tgtgttgacg gcagccttga ttgccggaca ggtatctgcc gccggaagcg
    18541 gtgcggggga tatgaaacag ccgaaggaag tcggaaaggt tttaaggaaa catcagcgtt
    18601 acagcgagga agaaatcaaa aacgaacgcg cacggcttgc ggcagtgggc gaacgggtta
    18661 atcagatatt tacgttgctg ggaggggaaa ccgccttgca aaaggggcag gcgggaacgg
    18721 ctctggcaac ctatatgctg atgttggaac gcacaaaatc ccccgaagtc gccgaacgcg
    18781 ccttggaaat ggccgtgtcg ctgaacgcgt ttgaacaggc tgagatgatt tatcagaaat
    18841 ggcggcagat tgagcctata ccgggtaagg cgcaaaaacg ggcggggtgg ctgcggaacg
    18901 tgctgaggga aagaggaaat cagcatctgg acggactgga agaagtgctg gctcaggcgg
    18961 acgaaggaca gaaccgcagg gtgtttttat tgttggcaca agccgccgtg caacaggacg
    19021 ggttggcgca aaaagcatcg aaagcggttc gccgcgcggc gttgaaatat gaacatctgc
    19081 ccgaagcggc ggttgccgat gtggtgttca gcgtacaggg gcgtgaaaag gaaaaggcaa
    19141 tcggagcttt gcagcgtttg gcgaagctcg atacggaaat attgcccccc actttaatga
    19201 cgttgcgtct gactgcacgc aaatatcccg aaatactcga cggctttttt gagcagacag
    19261 acacccaaaa cctttcggcc gtctggcagg aaatggaaat tatgaatctg gtttccctgc
    19321 acaggctgga tgatgcctat gcgcgtttga acgtgctgtt ggaacgcaat ccgaatgcag
    19381 acctgtatat tcaggcagcg atattggcgg caaaccgaaa agaaggtgct tccgttatcg
    19441 acggctacgc cgaaaaggca tacggcaggg ggacggagga acagcggagc agggcggcgc
    19501 taacggcggc gatgatatat gccgaccgca gggattacgc caaagtcagg cagtggttga
    19561 aaaaagtgtc cgcgccggaa tacctgttcg acaaaggtgt gctggcggct gcggcggctg
    19621 tcgagttgga cggcggcagg gcggctttgc ggcagatcgg cagggtgcgg aaacttcccg
    19681 aacagcaggg gcggtatttt acggcagaca atttgtccaa aatacagatg ctcgccctgt
    19741 cgaagctgcc cgacaaacgg gaggctttga gggggttgga caagattatc gaaaaaccgc
    19801 ctgccggcag taatacagag ttacaggcag aggcattggt acagcggtca gttgtttacg
    19861 atcggcttgg caagcggaaa aaaatgattt cagatcttga aagggcgttc aggtttgcac
    19921 ccgataacgc tcagattatg aataatctgg gctacagcct gctttccgat tccaaacgtt
    19981 tggacgaagg cttcgccctg cttcagacgg cataccaaat caacccggac gataccgctg
    20041 tcaacgacag cataggctgg gcgtattacc tgaaaggcga cgcggaaagc gcgctgccgt
    20101 atctgcggta ttcgtttgaa aacgaccccg agcccgaagt tgccgcccat ttgggcgaag
    20161 tgttgtgggc attgggcgaa cgcgatcagg cggttgacgt atggacgcag gcggcacacc
    20221 ttacgggaga caagaaaata tggcgggaaa cgctcaaacg tcacggcatc gcattgcccc
    20281 aaccttcccg aaaacctcgg aaataatgca ggtccatcct ttcagacggc ataaggtttg
    20341 ccgggaagcc ggggcattcg ggcaaacggc acgcagttcg cacgcgttat tgcacggcac
    20401 accgaaccca tcggccggca ggatggcatc cgttaaggaa attctgatga aacacactgt
    20461 atccgcatcg gtcatcctgc ttttgaccgc ttgcgcgcaa ttacctcaaa ataacgaaaa
    20521 cctgtggcag ccgtccgaac acacccgcag tttcacggca gaagggcggt tggcagtgaa
    20581 agcggaaggg aaaggttcgt atgcaaattt cgattggaca taccaaccgc ccgtggaaac
    20641 catcaatatc aatacccctt tgggcagtac gctcgggcag ttgtgtcaag acagggacgg
    20701 cgcattggca gtggacggca aaggaaatgt ctatcaggcg gaaagtgcgg aagaattaag
    20761 caggcagctg gtcggtttca aactgccaat ccaatatctg catatctggg cagatggcag
    20821 gcgtgtggcg ggcgcgcctt accgcatcct gccggacggc atattggaac aatacggttg
    20881 gactgtcggc agaaccgccg acagtggggg gcaagtccga acgttgcaac tgaataacgg
    20941 aaatttgaac atcaggctgg ttttcaccga aatcggtatg ccgtctgaaa ctgaaaccct
    21001 ggaacgctgt gcggcgcgca cgagataagg cggacagatg aatattgcgg acggacggca
    21061 ggcgtttccc gcacctgcaa aactgaatct cgatttgagg attactggaa agcgggaaga
    21121 cggttatcac aatatcgaaa gcatattctg cctgatagat ttgcaggata ccgtatattt
    21181 gaaactaagg gacgacggca aaatcatcct gcacaatccg gttgatggaa tgccgcagga
    21241 agtagattta agctaccgtg ccgcatcgtt gctgcaaaaa tatgcgcgca accccgccgg
    21301 cgtggaaata tggctggaca aaaaaatccc gacaggggcg ggtttgggcg gcggaagctc
    21361 ggatgcggca accgttttgc tggtgttgaa ccgttggtgg cagtgttccc gaacgacgca
    21421 gcagctgatt gacttgggcg caactttggg tgcggacgta ccatttttta ttttcggaaa
    21481 aaatgctttt gcaagcggga taggtgaaaa actgatagga atggatattc cgaaacagtg
    21541 gtatgtcatc gtcaaaccgc ccgtccacgt ttccactgca aaaattttca cacacgaagg
    21601 cttgacacga aattccgcct caagcataat gccgactttc caaaacctgc aaccgtttag
    21661 aaatgatatg caggcagttg tatttaaaga ataccctgaa gtttggaaag cctattccga
    21721 attgtcccga tatggatttg ccttaatgac aggttctggt gcgtgtgtat tcacggcgtg
    21781 tcaagatagg gatagcgcat acaatatata ccgacaagtt tcagatttgt acgaggcata
    21841 tttggcagag ggtctttcaa aacatccttg gttgtccgta taaacattgt tggggagtcg
    21901 tcaagcggtt aagacactgg attttgattc cagcatgcga aggttcgaat ccttcctccc
    21961 cagccagata aaagcgtgta agcctgctta cacgctttta tttcatagaa ataaaaatat
    22021 tgaaatgcct ttgtttgtgt cggatgttgc aggtataatg tcgggcttgg tacaagcaga
    22081 gggaagcatt gtgttttctg agcggaagtt aaacataaaa tcaggtgaga atatggctgc
    22141 gtacgacagt ttgatggtat ttacaggcaa tgccaatccc gaattggcac aacgtgttgt
    22201 caggcatttg gacatttctt tgggcaatgc ttccgtatcc aagttttcag acggcgaagt
    22261 tgccgtcgaa ctgttggaaa acgtacgcgg gcgcgatgtt ttcatccttc agccgacctg
    22321 tgcgccgacc aatgacaacc tgatggaaat cctgacgatg gcggatgcac tgaagcgtgc
    22381 ttcggcaggt cgtattacca cagccattcc gtatttcggc tatgcgcgcc aagaccgccg
    22441 tccgcgttcc gtccgcgttc cgatttctgc caaactggtg gcaaatatgc tgtattcggc
    22501 agggatcgac cgtgttttga ctgtcgattt gcatgccgac cagattcaag gtttcttcga
    22561 tattccggtg gacaatattt atgccacccc gattctgttg aacgacatca aacaacagcg
    22621 gattgaaaat ctgaccgtcg tcagcccgga catcggcggt gtcgtccgcg cccgcgccgt
    22681 ggcaaaatcc ttgaatgccg acttggcaat catcgataaa cgccgcccga aagccaatgt
    22741 ggcagaagtc atgaacatca tcggcgatat tcaaggcaga acctgtctga ttgtggacga
    22801 tatgattgac accgcgaata ccttgtgtaa agctgccgtc gccctgaaag agcggggggc
    22861 ggaacgtgtt ctagcctatg ccagccacgc tgtattctcc ggagaggcgg tcagccgtat
    22921 cgcctcatcc gaaatcgacc aggtggtcgt aaccgatacc attcctttgt ctgaagcggc
    22981 taaaaactgc gaccgtatcc gtcaggtaac gattgccggt ctgttggccg aaaccgtccg
    23041 ccgcattagc aatgaagaat ccgtctcata tcttttcaat gaagaagtga tgacaggcag
    23101 catgttgctg ccataagccc gaagccgtct taagctggtc gcggccgatg acggcgattt
    23161 tacctaactt ggagtattta acatgactta tgaaattcaa gcttctgttc gtgaagcaca
    23221 aggcactggt gcgagccgcc gcctgcgtcg cgaaggccaa atccccggca ttctgtacgg
    23281 tgaaggtcaa gagcctgttg caatcgctgt ggatcacaaa accgtattct acgcattgga
    23341 aaaagaatct ttccatactg cgttgattaa gttgtctctg aacggtgaaa ccaaagacgt
    23401 tatcgtccgc gatttccaaa tgcacccgtt ccgccgcgaa gttcaacaca tcgacttcca
    23461 agctgtgaaa gccgatcaac ttgtacgcat ccgtgttccc ctgcacatcg ttaacgctga
    23521 aaattcccaa gcggtcaaac tgcaaggcgg ccgcgtatct ctgttaaaca cttctgttga
    23581 agtagttgct ttgcctgcca acatccctgc tttcttggat ttggattgtg ccgaagtggt
    23641 tgccggcgac attctgcact tgtcagacat caaactgcct gaaggtgtag aaagcgtttc
    23701 cctgaaacgt aacgaaaatc tggctgttgc taccgttacc ggtaagaaac gctaattgat
    23761 tgaaaagcag gcggtacgta tatgatgcgt accgccttat tgtttttggc tgtgtttcaa
    23821 tatttggttg atttcatccg tttataaggg aaaaccgctt atttccgttc gggtggaaat
    23881 ttatccagac gtattgcgcg acaacggatg gttggctcaa aaacggcatt tcgtaccgga
    23941 tgaaaatgaa gaagatatgt cgttcacatt ccggtagctg tccggctcga accggctatc
    24001 agagatagtc ggtcaatttt caccctgaaa atcacttttc ttttaacttg caacatattc
    24061 cgataaaatg gacactttgt aagtaatcat tgatggaaga cgcaattatg gcaaccgaac
    24121 cgaaccgaac cgaaccgaac cgaaattata cacgatttag aagataattt caaacaaaac
    24181 aatatattaa aactcaaaca actctttccc gaagtctttt gtgaagacca aattgacttt
    24241 gaaaagctca aactcgtcct cggcgcagaa aaccttgccg gtgcgggcga acgttatcaa
    24301 ctcgattggg cgggcaaaac cgcctcctat ctcaacctgc aaagccccac ttcccgcacc
    24361 ctcgtcccct gcaaagaaga atccgcagat ttcgacggca cgcaaaacgt gtttatcgaa
    24421 gccgaaaacc tcgaagcact gaaaatcctg caaaaatcct acgccggcag cgtaaagatg
    24481 atttacatcg acccgcccta caataccggc aacgattcct tcgtctatcc cgacaaattc
    24541 tccgaaagcc gcgaagaata cgcccgccgc gtgggcgata ccgacgacgc gggttacctg
    24601 aagcgcgacg gcgtgttcca gggcgcgtgg cgcaaaaacg gcaaagacag tggccattac
    24661 cacagcaact ggctctctat gatgctgccg cgcctgcatc tggcgaaaac cctgctgcgc
    24721 gaagacggcg tgatttttat cagcattgac gacaacgaac aggcgcagtt gaaattgtta
    24781 tgtgatgaag tgtttggggc ggagaatttt gtcggtcagt ttccttggcg caaacgcacg
    24841 gcaaaatcgg acgtgccgtt cggcgtttcc gccgattatg aatatctgct tgcctatgcc
    24901 cgcagtaatg cctttattgc cagtatcgat gcggaagaac gcagatattt tgaaaccgat
    24961 gatttcccga atcgcccgtg gcggacgcat gatttgacta ctcaaagaaa tgccagtgaa
    25021 cgaccaaata gttttttcac tatggttaat cctaaaacag gcaaagaata tccggcgaat
    25081 ccaaatgcaa cttggcgtgt tactaaggat acatttcaag aatattacaa tgcgggaaaa
    25141 atcgttttcc ccgatgatta cgatttcctc aaaattaaaa accccgttat gcgttatttt
    25201 aaagatgacg acatgaagaa agacggagag cgcttcggac gtaaggcagt cagtacacgg
    25261 ctacctgaaa atgtaggtat gtcgctgaac ggtacaaaag aaattaccga actgtttaaa
    25321 agcaagttgt ttgattttcc caaaccgtca tccctaatta aatatttact gcaaatcctc
    25381 catgtttcag acggcctcat cctagacttc ttctccggca gcggcaccac cgcccatgcc
    25441 gtgatgcaac tgaatgccga agacggcggc aaccgccgtt tcatctgtgt ccagctcccc
    25501 gaagaaaccg acgaaaaatc tgaagcgcgc aaggcgggtt tcgacacgat tgccgaaatt
    25561 gccaaagaac gcatccgccg cgcaggcagg cagatttcag acggccttca agacggatcg
    25621 gaaacagata cgggctttaa agttttcaaa cttgccgaaa gcggtttcaa acaatggcgg
    25681 cagcccgagc agtccgatac ggaagccctg caacgcgaat tgtcgttgaa tatcgattct
    25741 gtgctgtccg aaacgtcgtc tgaaaatctg ctctacgaat tgatgctgcg tatgggcttg
    25801 aagctgactt gcaaggtttc gtttttagac gacgtatatt tcgtggaaga cgaggatacg
    25861 ggcgggctgt acgctttcct gctgaaacgc gtggatcaag gtttgattga tgccgtgctg
    25921 gcgaagcatc ccgctaaggt ggcggcattg gacaggctgt ttgagggcga cgatgcgctt
    25981 aaaagcaata ccgtattgca gatgaaggat gcgggcgtga tgttcgagtg tgtgtagtca
    26041 gccgaaagcg ggaagtgccg tctgccgtca ttcccgcgca ggcgggaatc tagaaactca
    26101 aagttgcaag aatttatcgg aaatgactga aacccaacga acctagattc ccactttcgt
    26161 gggaatgacg atatatcagt ttctgcgccg acaggtct
//
LOCUS       DBBZXU010000015        25096 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.015, whole genome shotgun sequence.
ACCESSION   DBBZXU010000015 DBBZXU010000000
VERSION     DBBZXU010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 25096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25096
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.015"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            247..1062
                     /locus_tag="ACJJDE_000542"
     CDS             247..1062
                     /locus_tag="ACJJDE_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7540519.1"
                     /translation="MNPAPKKPSLLFSSLLFSSLLFSSAAQAASEDGSRSPYYVQADL
                     AYAAERITHDYPKATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGDWRIAADYASYR
                     KWNNNKYSVNTKEVGRNNNNNIDIWKELKTENQENGSFHAASSLGLSAIYDFKLNDKF
                     DKFKPYIGARVAYGHVKHQVHSVRKETTTVFSKPSGSVTKPGEIVETPTSKPAYHESH
                     SISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYRF"
     gene            complement(1036..1245)
                     /locus_tag="ACJJDE_000543"
     CDS             complement(1036..1245)
                     /locus_tag="ACJJDE_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540520.1"
                     /translation="MPSERLSDGIFPCVLNRIHETPDAFGGNVGCRAMFGGDQRTKCA
                     GKGLMPSEGSDGIGIGESEAVAHAQ"
     gene            complement(1263..1820)
                     /locus_tag="ACJJDE_000544"
     CDS             complement(1263..1820)
                     /locus_tag="ACJJDE_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7540521.1"
                     /translation="MDALKLLTNRRSSKKLKPPAPDAAELEQIFQAATQVPDHGNMRP
                     FRFTVIQGEVGLQRFRDVLKQTVAELNFGDDAMKKAEKVGNMAPMVIGVTFAPNRDVP
                     KPKPEWEQMLTAGCAAYALQLAATAQGFDNVWITGMWVNSPLLREAFGCADKDKIIGL
                     MMVGTPTEEVHKPKNTDLEAFVSHW"
     gene            complement(1896..3530)
                     /locus_tag="ACJJDE_000545"
     CDS             complement(1896..3530)
                     /locus_tag="ACJJDE_000545"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:1900727 - osmoregulated periplasmic glucan
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG7540522.1"
                     /translation="MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGT
                     GADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKS
                     MLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAA
                     VSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLD
                     MAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSC
                     GTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLENDSGCKGVCGKV
                     PNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYT
                     EAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYV
                     SDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENE
                     YSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR"
     gene            complement(3808..4914)
                     /gene="serC"
                     /locus_tag="ACJJDE_000546"
     CDS             complement(3808..4914)
                     /gene="serC"
                     /locus_tag="ACJJDE_000546"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HGG7540523.1"
                     /translation="MSLYPIYNFSAGPAVLPEAVLETARQEMLDYNGTGFPVMAMSHR
                     SEMFLSILHHAEQDLRQLLKVPDNYKILFLQGGATTQFNMAAMNLAHGFRTADAVVTG
                     NWSRIAYEQMSRLTDTEIRLAAHGGEQFDYLDLPPVETWDVAPDSAFVHFAVNETVNG
                     LQYREVPRLSEGMPPLVCDMSSEILSREFDVADYGLIYAGAQKNIGPAGVTVVIVRED
                     LLERCPNDIPDVFNYRSHLNREGMYNTPSTYAIYMSGLVFRWLQAQGGVKKIEAVNRL
                     KAQTLYETIDGSGGFYINRIRPNARSKMNVVFQTGDEELDRRFVLEAELQGLCLLKGY
                     KSVGGMRASIYNAMPLEGVRALADFMRDFQRRYG"
     gene            5279..5710
                     /gene="rimP"
                     /locus_tag="ACJJDE_000547"
     CDS             5279..5710
                     /gene="rimP"
                     /locus_tag="ACJJDE_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HGG7540524.1"
                     /translation="MDIQTILEKTLPGLGYELVDFELTAQGTLRVFIDKESGITVEDC
                     ATVSNHLSRVFMVEDIDYKNLEISSPGLDRPLKKAADFVRFAGQNAKIKTRLPIDGQK
                     NFIGKIEGCENDTVTISFDGKTVQIELGNIDKARLRPEFKF"
     gene            5738..7240
                     /gene="nusA"
                     /locus_tag="ACJJDE_000548"
     CDS             5738..7240
                     /gene="nusA"
                     /locus_tag="ACJJDE_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HGG7540525.1"
                     /translation="MSREMLQLAEALASEKNVDAEVVFQALEFALSTAAKKKADREHM
                     DVRVQINRDTGEYQTFRRWLIVADEDYTYPDVEKTIEEIQEEIPGTAIQIGEYYEEQL
                     PNEGFGRQAAQTAKQIILQRIRDAEREQNLNEFLAVKEDIVSGTVKRVERHGIIVEVV
                     AGKLDALIPRDQMIPRENFRSGDRIRALFLRVEEIGNTGRKQVILSRTSGDFLVKLYA
                     NEVPEIADGMLEIRAVARDPGQRAKVAVKANDQRIDPQGTCIGVRGSRVNAVSNELSG
                     ERIDVVLWSPEPAQFVMSALSPAEVSRIVIDEDKHAVDVIVDENQLALAIGRGGQNVR
                     LASDLTGWQLNIMTSAEADERNAAEDAAIRRLFMDHLNVDEETADVLVQEGFATLEEV
                     AYVPAAELLAIEGFDEEIVDMLRNRARDAILTMAIAAEEKLGEVSDDMRNLEGIDADM
                     LRSLAEAGITTRDDLAELAVDELIEITGVNEETAKAVILTAREHWFTEDK"
     gene            7252..10140
                     /gene="infB"
                     /locus_tag="ACJJDE_000549"
     CDS             7252..10140
                     /gene="infB"
                     /locus_tag="ACJJDE_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HGG7540526.1"
                     /translation="MSNTTVEQFAAELKRPVEDLLKQLKEAGVSKNSGSDSLTLDDKQ
                     LLNAYLTKKNGSNGGTISIRRTKTEVSTVDGVKVETRKRGRTVNIPSAEELAAQVKAA
                     QTQAAPVRPEQTAEDAAKARAEAAARAEARAKAEAEAAKLKAAKAGNKAKPAAQKPTE
                     AKAETAPVAAETKPAEESKAEKAQADKMPSKKPAEPKEKAAKPKHERNGKGKDAKKPA
                     KPAAPAVPQPVVSAEEQAQRDEEARRAAALRAHQEALLKEKQERQARREAMKQQAEQQ
                     AKTAQEAKTGRQRPAKPAEKPQAAAPAVENKPVNPAKAKKEDRRNRDDEGQGRNAKGK
                     GGKGGRDRNNARNGDDERVRGSKKGKKLKLEPNQHAFQAPTEPVVHEVLVPETITVAD
                     LAHKMAVKGVEVVKALMKMGMMVTINQSIDQDTALIVVEELGHIGKPAAADDPEAFLD
                     EGAEAVEAEALPRPPVVTVMGHVDHGKTSLLDYIRRTKVVQGEAGGITQHIGAYHVET
                     PRGVITFLDTPGHEAFTAMRARGAKATDIVILVVAADDGVMPQTIEAIAHAKAAGVPM
                     VVAVNKIDKEAANPERIRQELTAHEVVPDEWGGDVQFIDVSAKKGLNIDALLEAVLLE
                     AEVLELTAPVDAPAKGIIVEARLDKGRGAVATLLVQSGTLKKGDMLLAGTAFGKIRAM
                     VDENGKSITEAGPSIPVEILGLSDVPNAGEDAMVLADEKKAREIALFRQGKYRDVRLA
                     KQQAAKLENMFNNMGETQAQSLSVIIKADVQGSYEALAGSLKKLSTDEVKVNVLHSGV
                     GGITESDVNLAIASGAFIIGFNVRADASSRKLAENENVEIRYYNIIYDAIDDVKAAMS
                     GMLSPEEKEQITGTVEIRQVISVSKVGNIAGCMVTDGVVKRDSHARLIRNNVVIHTGE
                     LSSLKRYKDDVKEVRMGFECGLMIKGFNEIMEGDQLECFDIVEVARTL"
     gene            complement(10351..11745)
                     /locus_tag="ACJJDE_000550"
     CDS             complement(10351..11745)
                     /locus_tag="ACJJDE_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3482 domain-containing protein"
                     /protein_id="HGG7540527.1"
                     /translation="MNKQPLSLAVVGHTNTGKTSLLRTLLRDSGFGEVRNAPSTTRHV
                     EEAAISDGADTLVFLYDTPGLEDAGGVLEWLENHTDNRSDGIERLQQFLGSHGAHHDF
                     NQEAKVLRQVLQSDMAMYVIDAREPVLDKYRDELIILSWCAKPVMPVFNFTGGQPPES
                     WTTMLARRNLHVFAGFDTVAFDFEGELRLWENLATMLPERSTLDRLTAMRRREWQRLD
                     GEARREIADFLLDAAAFRQEVDENEDTATVLQTMQAEIRQLERQMQQRLFALYRFYHS
                     EIDGGDWMPQAFRQDPFDSELLKQYGIRTGTGAATGALIGLGLDIATLGGSLGLGTAI
                     GGFLGGILPNTRTISDKLSGRQTLHTDPETLTLLAARALDLLHVLQTRGHAAQSDIEL
                     HSRKAPWDATRLPPELNKARSHWKWSSLNTHRPETSRAERAGYVEKLQIRLSGKYSEL
                     NLNQDKAASRRQYK"
     gene            complement(11807..13156)
                     /locus_tag="ACJJDE_000551"
     CDS             complement(11807..13156)
                     /locus_tag="ACJJDE_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2868 domain-containing protein"
                     /protein_id="HGG7540528.1"
                     /translation="MLNPSRKLVELVRILEEGGFIFSGDPVQATEALRRVDGSTEEKI
                     IRRAEMIDRNRMLRETLERVRAGSFWLWVVAASMMFTAGFSGTYLLMDNQGLNFFLIL
                     AGVLGMNTLMLAVWLAMLFLRVKVGRFFSSPATWFRGKDPVNQAVLRLYADEWRQPSV
                     RWKIGATSHSLWLCTLLGMLVSVLLLLLVRQYTFNWESTLLGDSSSVRLVEMLAWLPA
                     KLGFPVPDARAVIEGRLNGNIADARAWSGLLVGSIACYGILPRLLAWVVCKILLKTSE
                     NGLDLEKPYYQAVIRRWQNKITDADTRRETVSAVSPKIILNDAPKWAVMLETEWQDGA
                     WFEGRLAQEWLDKGVAANREQVAALEAELKQKPAQLLIGVRAQTVPDRGVLRQIVRLS
                     EAAQGGAVVQLLAEQGLSDDLSEKLEHWRNALAECGAAWLEPDRAAQEGRLKTNDRT"
     gene            13299..13925
                     /locus_tag="ACJJDE_000552"
     CDS             13299..13925
                     /locus_tag="ACJJDE_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HGG7540529.1"
                     /translation="MYTGERFNTYSHLSGLILAAAGLVLMLLKTIGHGDGYRIFSVSV
                     YGISLLLLYLSSSLYHGIAAGKLKSILKKTDHCMIYVLIAGSYTPFALVSLRNGPGWT
                     VFSLSWLLAAAGIAQELTIGRKSEKRLLSIVIYVVMGWMVLAVMKSLTASLPSAGLAW
                     LAAGGMLYSVGIYWFVNDEKIRHGHGIWHLFVLGGSITQFVSVYGYVI"
     gene            complement(13989..15407)
                     /locus_tag="ACJJDE_000553"
     CDS             complement(13989..15407)
                     /locus_tag="ACJJDE_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7540530.1"
                     /translation="MENILSVLVGTVNRFLWDYLLIYALLGIGLFFTLYLGAPQITKL
                     GAGFKSVFGGLFAKGDKDDKSLSQFQALAVAISAQIGTGNVAGVATAITAGGPGAIFW
                     MWVSAVLGMSTIFAEALLAQKYRVVSHGKYIGGPAFYITHGLTPKIGRGAARFLSGFF
                     SIALIIALGFIGNATQANSIASAVTIAFDVPSLAVGIVLAVLAGMVVIGGVNRIANIA
                     QFVVPFMAVVYILCAVVILFEFSDHIVPMFNHIFTAAFNPEAVLGGAAGIGMREAIRF
                     GVARGLFSNEAGMGSTPHAHATADVKHPVQQGMAAFVGVFIDTILVCTATALIILLTD
                     ANLSGEQGAAVTQFAFNKAFPGFGSQLLAVCLTFFALTTIIGWYYFGESNIRFLFRGR
                     HLGIYRALVLLAIVLGTLGKVDLVWSLSDMFNGFMVIPNLIALFLLRKEIRAIYDDYL
                     AQKKAGRDLSYPYEFHEFHDKG"
     gene            15734..16462
                     /locus_tag="ACJJDE_000554"
     CDS             15734..16462
                     /locus_tag="ACJJDE_000554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004285004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HGG7540531.1"
                     /translation="MAGHSKWANIQHKKARQDAKRGKIFTRLIKEITVAARMGGGDPG
                     ANPRLRLALEKAAENNMPKDNVQRAIDKGTGNLEGVEYIELRYEGYGIGGAALMVDCL
                     TDNKTRTVADVRHAFTKNGGNLGTDGCVAFNFVHQGYLVFEPGVDEDALMEAALEAGA
                     EDVVTNDDGSIEVITAPNDWAGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQ
                     KLIDALEDLDDVQDVYTSAVLNLD"
     gene            complement(16521..17009)
                     /locus_tag="ACJJDE_000555"
     CDS             complement(16521..17009)
                     /locus_tag="ACJJDE_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HGG7540532.1"
                     /translation="MTPLFRKAVWLLFAVSVCAFAGSLAAQYVLGMEPCVLCISQRLC
                     VLATALCTAIVLMCRPRRRAGGLFGAVFISIPAVTGISVAAYQLWLQSLPPGTAPSCG
                     APWTFRLKGWSLFDWFEPVVRGFGNCAEPDYLLGVALPVWSAAYFLAVVLTVWWAWAR
                     AK"
     gene            complement(17767..18231)
                     /locus_tag="ACJJDE_000556"
     CDS             complement(17767..18231)
                     /locus_tag="ACJJDE_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HGG7540533.1"
                     /translation="MKELDKIDFRILKILQQNARIPMTELAEKVGLSTTPVTERVRRL
                     EREHYISGYHAHLNPHLLGKPLLVFVELKLQSKSGNIFEDFKKEVLKIPQIMECHLVS
                     GEYDYLIKVRLPDMSAYRDMLGNILLQLPAASESRSYVVMEEVKENPVLDLD"
     gene            18556..19614
                     /gene="alr"
                     /locus_tag="ACJJDE_000557"
     CDS             18556..19614
                     /gene="alr"
                     /locus_tag="ACJJDE_000557"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HGG7540534.1"
                     /translation="MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRC
                     AFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQ
                     WQLEALLSRHWKKPVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFS
                     CADEPESGITEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISP
                     FGGSDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRR
                     APSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGT
                     IPYELMCNIKRAKFTYIE"
     gene            complement(20156..21511)
                     /locus_tag="ACJJDE_000558"
     CDS             complement(20156..21511)
                     /locus_tag="ACJJDE_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HGG7540535.1"
                     /translation="MSIQSGEILETVKMVADQNFDVRTITIGIDLHDCISSDINVLNQ
                     NIYNKITTVGKDLVTTAKYLSAKYGVPIVNQRISVTPIAQIAAATHADSYVSVAQTLD
                     KAAKAIGVSFIGGFSALVQKGMSPSDEVLIRSIPEAMKTTDIVCSSINIGSTRAGINM
                     DAVKLAGETVKRTAEITPEGFGCAKIVVFCNAVEDNPFMAGAFHGSGEADAVINVGVS
                     GPGVVKAALENSDATTLTEVAEVVKKTAFKITRVGELIGREASKMLNIPFGILDLSLA
                     PTPAVGDSVARILEEMGLSVCGTHGTTAALALLNDAVKKGGMMASSAVGGLSGAFIPV
                     SEDEGMIAAAEAGVLTLDKLEAMTAVCSVGLDMIAVPGDTPAHTISGIIADEAAIGMI
                     NSKTTAVRIIPVTGKTVGDSVEFGGLLGYAPVMPVKEGSCEVFVNRGGRIPAPVQSMK
                     N"
     gene            complement(21526..21798)
                     /locus_tag="ACJJDE_000559"
     CDS             complement(21526..21798)
                     /locus_tag="ACJJDE_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HGG7540536.1"
                     /translation="MNNSVITVIGKDRVGIVYDVSKILAENQINILNISQQLMDDFFT
                     MIILVDTSKCSKSRQEVLDLFAEESKKLALDIRMQNEEIFQAMHRI"
     gene            complement(21924..22661)
                     /locus_tag="ACJJDE_000560"
     CDS             complement(21924..22661)
                     /locus_tag="ACJJDE_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system YwqK family antitoxin"
                     /protein_id="HGG7540537.1"
                     /translation="MKKLSRIVFSTVLLGFSAALPAQTYSVYFNQNGKLTATMSSAAY
                     IRQYSVVAGIAHAQDFYYPSMKKYSEPYIVASTQIKSFVPTLQNGMLILWHFNGQKKM
                     AGGFSKGKPDGEWVNWYPNGKKSAVMPYKNGLSEGTGYRYYRNGGKESEIQFKQNKAN
                     GVWKQWYADGSIKTEMVMVNDEPAKILTWDESGRLLSELSIRHHQRNGVVLEWYEDGS
                     KKSEAVYQDDKLVRKTQWDKDGYLIEP"
     gene            complement(22942..23841)
                     /gene="prmB"
                     /locus_tag="ACJJDE_000561"
     CDS             complement(22942..23841)
                     /gene="prmB"
                     /locus_tag="ACJJDE_000561"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008276 - protein methyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA];
                     GO_process: GO:0042273 - ribosomal large subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7540538.1"
                     /translation="MFNQAAQELTTIRDILRFAVSRFNEAGLFFGHGTDNAHDEAAYL
                     ILHTLNLPLDMLAPYLDAKLLEAEKEEVLAVIERRAVEHIPAAYLTHQAWQGEFDFYV
                     DERVIIPRSFIYELLGDGLRPWIEYDELVHNALDLCTGSGCLAIQMAHHYPDAQIDAV
                     DVSLDALEVAGINVEDYGLEERIRLIHTDLFEGLEGTYDLIVSNPPYVDAESVELLPE
                     EYLHEPELALGSGADGLDATRQILLNAAKFLNPKGVLLVEIGHNRDVLEAAYPELPFT
                     WLETSGGDGFVFLLTREQLLGEE"
     gene            23986..24579
                     /locus_tag="ACJJDE_000562"
     CDS             23986..24579
                     /locus_tag="ACJJDE_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540539.1"
                     /translation="MADGMGNLIGWEKTGLVVGKQWITAKDDKVSDVCNANGEMGVIG
                     LYEPFSHGALTIPGHPNCRCEVVSVSGGELGEFAEKKELRKAAMQYARDNFIGKSYVN
                     KNSGHELKVTWQGVKHAASKANQAELSIMTKLDDLLRYAKYEGSYSDRKGHPNIIAAH
                     KYRAVAKVGNESLNIGVIVREFPDDHKHYDHFILKDE"
     gene            24691..>25096
                     /locus_tag="ACJJDE_000563"
     CDS             24691..>25096
                     /locus_tag="ACJJDE_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HGG7540540.1"
                     /translation="MTKLYAEIAKMETQDDDTVKVWGYASSEEIDSDGEVIAAAAMKA
                     AIPDYMKFGAGREMHGSNAAGTAIEINVEDDGITFFGAHIIDPVVVSKVKTGVYKGFS
                     IGGSVTARDDLNKSQITGLKLTEISLVERPANP"
BASE COUNT         6675 a         6778 c         6129 g         5514 t
ORIGIN      
        1 ctgcagatgc ccgacggtct ttatagcgga ttaacaaaaa tcaggacaag gcgacgaagc
       61 cgcagacagt acagatagta cggaaccgat tcacttggtg cttcagcacc ttagagaatc
      121 gttctctttt ttgttcatcc gctatattgt gttgaaacat cgccacaaac ctgatatagt
      181 ccgctcctgc aacatcattg aaaatctttc ttttttaatc agttaaaacc gaatacggag
      241 ccgaaaatga atccagcccc caaaaaacct tctcttctct tctcttctct tctcttctct
      301 tctcttctct tctcttccgc agcgcaggcg gcaagtgaag acggcagccg cagcccgtat
      361 tatgtgcagg cggatttagc ttatgccgcc gaacgcatta cccacgatta tccgaaagca
      421 accggtgcaa acaacacaag cacagtaagc gattatttca gaaacatccg tgcgcattcc
      481 atccaccccc gggtgtcggt cggctacgat ttcggcgact ggaggatagc ggcagattat
      541 gccagttaca gaaaatggaa caacaataaa tattccgtaa acacaaaaga ggtgggaaga
      601 aacaataaca ataacattga catctggaaa gaactgaaga cggaaaatca ggaaaacggc
      661 agcttccacg ccgcttcttc tctcggctta tccgccattt acgatttcaa actcaacgat
      721 aaattcgata aattcaaacc ctatatcggt gcgcgcgtcg cctacggaca cgttaaacat
      781 caggttcatt cggtgagaaa agaaaccacg actgttttca gtaaaccaag tggtagcgtt
      841 acaaagccag gcgagatcgt agaaactccg accagcaaac ctgcctatca cgaaagccac
      901 agtatcagca gcttgggtct tggtgtcatc gccggtgtcg gtttcgacat cacgcccaag
      961 ctgaccttgg acaccggata ccgctaccac aactggggac gcttggaaaa cacccgcttc
     1021 aaaacccacg aagtctcatt gggcatgcgc taccgcttct gattccccga taccgatgcc
     1081 gtctgaacct tcagacggca tgagaccttt gcctgcgcac ttggtgcgct ggtcgcctcc
     1141 gaacatggcg cgacacccga catttccgcc gaacgcatcg ggcgtttcat gaatccggtt
     1201 taaaacgcat ggaaaaatgc cgtctgaaag cctttcagac ggcattgtgc ttgagattcc
     1261 gtttaccaat gactgacaaa cgcttccaaa tcggtattct tgggcttatg cacttcctct
     1321 gtcggcgtgc cgaccatcat cagcccgatg attttatcct tatccgcaca tccgaaagcc
     1381 tcacgcaaca gggggctgtt gacccacatc cccgtaatcc agacattgtc gaaaccttgc
     1441 gccgttgccg ccagttgcag cgcatacgcc gcacaacccg ccgtcagcat ctgttcccat
     1501 tccggtttcg gcttaggcac atcgcggttc ggcgcaaacg ttaccccgat aaccatcggc
     1561 gccatattgc ccactttttc cgcctttttc atcgcatcgt cgccgaaatt caattcggca
     1621 accgtttgct tcaacacatc gcgaaaacgt tgcaatccta cctcgccttg aatcacggta
     1681 aaacggaagg ggcgcatatt gccgtgatcg ggaacttggg ttgccgcctg aaatatttgt
     1741 tccaactccg ccgcatcggg ggcggggggc ttcagctttt tggaagatcg gcggttcgtc
     1801 aataatttta aagcatccat atcgttatac tccggtcatc ggtcgggtgt tcggacacat
     1861 atgccgtccg aaggcttcag acggcatatc cggcatcagc gcggacggcg gcaggctgcc
     1921 aatatatcca tttccttccg ataggtttgg ctattggaaa tgtccatcag ccccaatacc
     1981 gtgctgaaat agtggtcgtg cgaatattcg ttttccgccg ctttttgttt gaggcattgg
     2041 aaatctatgc ccccgtgttg gcggaaggct ttggaaaacc acataaccat cgggatatgc
     2101 gtctgcccgg aaggcgcgat ggcgtaaggc gcggcgtgca ggtacatccc gttttcgccc
     2161 aaactttcgc cgtggtcgga aacataatgc accacgcttt ccaaatcgtc gcggttttca
     2221 agtttgcgga taaccttgtc gataaactgg tccacataca aaaccgtatt gtcgtaagtg
     2281 ttgaccagcg tggcgcgggt gcatttgttg atttcgttgg tgtcgcaggt cggcgtgaat
     2341 ttgcgttcgg cttcggtata gcgttcgtaa tacgtcggcc cgtggctgcc gatggtatgc
     2401 aggattaaaa ccgcgtcttt atcgtttttg ttgaggactt cgtcgaactt ggtcagcagg
     2461 atattgtcga ggcactcgcc gttgcggcag tattcgggca ggttgagcga ggtaacgtcg
     2521 gtattcggca ctttgccgca cacgcccttg cagccggaat cgttttccaa ccaagtaact
     2581 tccacaccgg cgcgctgcac gatgtccagc aggttgtctt ggtgttcggc tttgatttcg
     2641 tcataatccg tgcggtcgaa ggttgagaac atacacggca gggagtgcgc ggtcgatgtg
     2701 ccgcagcttc tgacctgcgg gaaattgaca atttcatcgc cgcgcgcggc aagcagcggc
     2761 gtagtttggc ggctgtaacc gttcaaaccc cagttggcgg cacgcgtggt ctcgcccacg
     2821 accagcacca cgaaacggcg caggctgccg gccggccggt tttgcacgac cgccatatcc
     2881 aattgcgtat aaggaatatt ggaacgcttc caatctttgt atttcgacac gcccgcgccg
     2941 atgaaattag atggcacaat cagatgggtt actgatttat tgttgcggaa aaacgaggcg
     3001 taatcctgat attgcaacat tgcgatgccc aacgcgcaca aaaaggaaac ggcggcaagc
     3061 acaaggcgcg tcaaaagctc cttataccaa acgcggtatt taaccttgac ggcgatatac
     3121 gccagcgcgg gcaatacgcc caaacataca atccacagca catagcccgg cgtaatcagg
     3181 cgcgcgcttt cggcagccgt agtttgcaag acattattca acatcgactt gttgaaatag
     3241 atattgaaaa atatttcttg gtaagacacc gccgcactga taaccaatat caacggaatc
     3301 aataccttat gcacgaaagg cagggcaatg acgtgaaaaa cgaaattact taaaaaaaac
     3361 agcaccaccg gcatcgtata gaggaagata tccgccccgg tgccgttaaa aggatgaagc
     3421 tcgacaactt tggcaaaaaa ggcgtaattc aataccagcg aggaatacag ggaaaggaag
     3481 gcaatcagcg cggaagagcc gagcttcggc ctcaggttcg gttttatcat ttggaatgtg
     3541 tcggataagg gttggaaaag gcatccggca tttggaatcc ggattattga aaaagattct
     3601 taattataag gcaacggagc aaagcagggc aagaaaacgg aaggcgacgc aggctgccgg
     3661 atacacatct cggcacaaac agcatcacgc ccggattgaa aaggacggat agccgccggc
     3721 agcacaatct taccacctcc aaaacgccgc cggagaacgc cgaaacagcc gatgccgtct
     3781 gaagccgctt cagacaacat cgggacatca accgtaacgc cgttggaaat cgcgcataaa
     3841 atctgccaaa gcccgcacgc cttcgagcgg catcgcattg tagatgctgg cgcgcatccc
     3901 accgacagac ttatagccct tcaacaggca caagccctgc aattcggctt ccagcacaaa
     3961 acggcggtca agctcctcat cccccgtttg gaacacgaca ttcattttag aacgcgcatt
     4021 cggacggata cggttgatat agaaaccgcc gctgccgtct atcgtctcat acaaggtttg
     4081 cgccttcagc cgattgaccg cttcaatttt tttcacaccg ccctgcgcct gcagccagcg
     4141 gaacaccagc cccgacatat aaatcgcgta agttgacggc gtgttgtaca taccttcgcg
     4201 gttcaaatgc gaacggtagt tgaacacatc gggaatatcg ttcggacaac gctcgagcaa
     4261 atcctcacgc acaatcacca ccgtaacccc tgccggcccg atgtttttct gtgcgcctgc
     4321 gtaaatcagt ccgtagtcgg caacatcaaa ctcgcgcgac aaaatctcgc tggacatatc
     4381 gcacaccagc ggcggcatgc cttctgaaag gcgcggcact tcacggtatt gcagcccgtt
     4441 gaccgtttca ttgacggcaa aatggacaaa cgccgaatcg ggtgcaacat cccacgtttc
     4501 cacaggcggc aggtcgagat agtcgaactg ctcgccgcca tgcgccgcca aacggatttc
     4561 cgtatcggtc aaacggctca tctgttcata agcgatacgg ctccagttgc ccgttaccac
     4621 cgcgtcggca gtgcggaaac cgtgtgccag attcatggct gccatattaa attgggttgt
     4681 tgctccgccc tgcagaaaca atatcttata gttgtcaggc actttcaaaa gctgcctcaa
     4741 atcctgttcc gcatgatgca ggatgctcaa aaacatttcc gaacggtggc tcatcgccat
     4801 cacaggaaaa cccgtaccgt tgtagtccaa catttcctgc cgcgccgttt ccaacacggc
     4861 ttcgggcaat acggcagggc cggcggaaaa attgtaaatc ggataaagag acatgatgca
     4921 gccttgattc tgaacaataa cccgcccgat tttaggcttg cagcaggctt tgtgcaagga
     4981 tggaaaatac ctgtcctccg cccggcttca tgccgcccga acacggaaaa caacatcaat
     5041 atattgattt acaaacataa aaatcatgct agcgacaaat agatacattt gttttgtcaa
     5101 caatattcac gatttcccat tacaaacctc ccttacaccc gcttttttcc gtcccaaaaa
     5161 cacaaaataa atcaacactt tcatttctcc gcaaaagcgg ttataattac gccgattttt
     5221 caactttgac gaaaaatggc cacggggcca tttttttatt atgtacatag ggagcagcat
     5281 ggatatccaa accatcctcg aaaaaaccct gcccggcctg ggctacgaac tggtcgattt
     5341 cgaactgacc gcgcaaggaa cattgcgcgt gttcatcgac aaagaaagcg gcattaccgt
     5401 cgaagactgc gcaaccgtca gcaaccattt gagccgcgtc ttcatggttg aagacatcga
     5461 ctacaaaaac ctggaaattt ccagccccgg actcgaccgt cccttgaaaa aagccgccga
     5521 cttcgtgcgc tttgccggtc agaatgccaa aatcaaaacc cgcctgccga tagacggtca
     5581 gaaaaacttt atcggtaaaa tcgaaggctg cgaaaacgat accgttacca tatccttcga
     5641 cggcaaaacc gtacaaatcg aattgggcaa catcgacaaa gcccgcctgc gccccgaatt
     5701 caaattctaa aacacaacaa tattggagat gttcaaaatg agtcgtgaaa tgttacagct
     5761 ggcagaagca ctggcaagcg aaaaaaacgt tgatgcggaa gtcgtcttcc aagcactgga
     5821 attcgccctg tctaccgccg ccaagaaaaa ggcagaccgc gaacacatgg atgtccgcgt
     5881 ccaaatcaac cgcgataccg gcgaatacca aaccttccgc cgctggctga ttgtcgccga
     5941 tgaagactat acctatcccg atgtcgaaaa aaccatcgag gaaatccaag aggaaattcc
     6001 cggcaccgcc atccaaatcg gcgaatacta cgaagagcag ctgcccaacg aaggcttcgg
     6061 ccgccaagcc gcgcaaaccg ccaaacaaat catcctgcaa cgcatccgcg atgccgagcg
     6121 cgagcagaat ctgaacgagt ttctcgccgt caaagaagac atcgtgtccg gcacggtcaa
     6181 acgcgtcgaa cgccacggca tcatcgtcga agtcgttgcc ggcaaactgg acgcgctgat
     6241 tccgcgcgac caaatgattc cgcgcgaaaa cttccgcagc ggcgaccgca tccgcgccct
     6301 cttcctgcgc gtcgaagaaa tcggcaacac cggccgcaaa caagtcatcc tgagccgtac
     6361 ttccggcgat ttcctcgtca aactgtacgc caatgaagta cctgaaattg cagacggcat
     6421 gcttgaaatc cgcgctgtcg cccgcgaccc gggccagcgt gccaaagtcg ccgtcaaagc
     6481 caacgaccag cgcatcgatc cgcaaggcac ctgtatcggc gttcgcggtt cgcgtgtcaa
     6541 tgccgtcagc aacgaattgt ccggcgagcg catcgacgtt gtcctttggt cgcccgagcc
     6601 tgcccaattc gtcatgagcg cgctctcacc cgccgaagtc agccgcatcg tgattgacga
     6661 agacaaacac gccgttgacg tgattgttga tgaaaaccaa ctggcgctag ccatcggacg
     6721 cggcggtcaa aacgtgcgcc ttgcttccga cctgaccggc tggcagctca acatcatgac
     6781 ttccgccgag gcagacgaac gcaatgcggc agaagatgcc gccatccgcc gcctgtttat
     6841 ggatcacttg aacgtggacg aagaaaccgc cgacgtactg gttcaagaag gttttgcaac
     6901 cttggaagaa gtcgcctatg ttcctgccgc cgaactgctt gccattgaag gatttgacga
     6961 agaaatcgtc gatatgctcc gcaaccgcgc ccgcgatgcc atcctgacca tggcgattgc
     7021 cgccgaagaa aaactgggcg aagtgtccga cgatatgcgc aacctcgaag gcatagatgc
     7081 cgatatgctc cgcagccttg ccgaagcagg cattaccacc cgcgacgact tggcagagct
     7141 tgctgtggac gaactgattg aaatcaccgg tgtaaacgaa gaaaccgcaa aagccgtcat
     7201 cctgaccgca cgcgaacact ggtttaccga agacaaataa agggggtaca gatgagtaac
     7261 acaaccgtag aacaatttgc cgccgagctg aaacgccccg tcgaagacct gttgaaacag
     7321 ttgaaagaag ccggcgtcag caaaaacagc ggcagcgatt ccctgacgct ggacgacaaa
     7381 cagcttctga acgcctacct gaccaagaaa aacggcagca acggcggcac catcagcatc
     7441 cgccgcacca aaaccgaagt cagcaccgtt gacggcgtaa aagtcgaaac acgcaaacgc
     7501 ggacgcactg tcaacattcc ttctgccgaa gaattggcag cacaggtaaa agccgcccaa
     7561 acccaagccg cacctgtccg gccggagcag acggcagaag acgcggcaaa agcccgagcc
     7621 gaagctgccg cacgtgcaga agcccgtgcc aaggcagaag cggaagcggc aaaactgaaa
     7681 gcggcaaaag caggcaacaa agccaaacct gccgcgcaga aacccaccga agcaaaagcc
     7741 gaaaccgcac ctgttgcggc ggaaaccaaa cccgccgaag aaagcaaagc ggaaaaagcc
     7801 caagccgaca aaatgccgtc taaaaaaccc gccgagccca aagaaaaagc cgccaagccg
     7861 aaacacgagc gaaacggcaa aggcaaagat gccaaaaaac cggcgaaacc tgccgcacct
     7921 gccgtgccgc aacccgtggt cagcgcagaa gaacaggcgc aacgcgatga agaagcacgc
     7981 cgtgccgccg cacttcgcgc ccaccaggaa gccctgttga aagagaaaca ggaacgtcag
     8041 gcacgccgcg aagccatgaa acaacaggca gaacaacagg caaaaaccgc acaggaagcc
     8101 aaaaccggca gacagcgtcc cgccaaacct gccgagaaac cgcaggcagc cgcgccggcc
     8161 gtcgaaaaca agcctgtcaa tccggcaaaa gcgaaaaaag aagaccgccg caaccgcgat
     8221 gacgaaggtc aaggccgcaa cgccaaaggc aaaggcggaa aaggcgggcg cgaccgcaac
     8281 aatgcacgca acggcgacga cgagcgcgta cgcggcagca aaaaaggcaa aaaactcaaa
     8341 ctcgagccga atcaacacgc cttccaagca ccgaccgaac ccgtcgttca tgaagttttg
     8401 gttcccgaaa ccattaccgt tgccgatttg gcgcacaaaa tggcggtcaa aggcgtggaa
     8461 gtggtcaaag ccctgatgaa gatgggcatg atggttacca tcaaccaatc catcgaccaa
     8521 gacaccgccc tgattgtggt ggaagaactc ggccacatcg gcaaacctgc cgcagccgac
     8581 gaccctgaag cattcttgga cgagggcgcg gaagcagtgg aagccgaagc attgccgcgt
     8641 ccgcccgtcg ttaccgtgat gggccacgtc gaccacggca aaacctcgct gctggactac
     8701 atccgccgta ccaaagtggt acagggcgaa gcgggcggca ttacgcagca catcggcgcg
     8761 taccacgttg aaacccctcg cggcgtgatt accttcttgg acaccccggg ccacgaagcc
     8821 tttaccgcta tgcgcgcacg cggtgcgaaa gcaaccgaca tcgtgattct tgtggtcgcc
     8881 gccgacgacg gcgtgatgcc gcaaaccatc gaagcgattg cccacgccaa agcggcaggc
     8941 gtaccgatgg tggttgccgt caacaaaatc gataaagaag ccgccaaccc agagcgtatc
     9001 cgccaagagc tgaccgcaca cgaagtcgtg cctgacgaat ggggcggcga tgtacagttt
     9061 atcgacgttt ccgctaaaaa aggcctgaac atcgatgcat tgctcgaggc agtcttgctc
     9121 gaagccgaag ttttggaact gaccgcacct gtcgatgcgc ccgccaaagg catcatcgtc
     9181 gaggcgcgct tggacaaagg ccgcggcgcg gttgccacat tgctggttca aagcggcacg
     9241 ctgaaaaaag gcgatatgct gctggccggt acggcattcg gcaaaatccg cgcgatggtc
     9301 gatgaaaacg gcaaatccat taccgaagcc ggtccgtcca tccccgtcga aatcctcggc
     9361 ttgtccgacg taccgaatgc gggtgaagac gcgatggtat tggcggacga gaaaaaagcg
     9421 cgcgaaatcg ccctcttccg ccaaggcaaa taccgcgacg tgcgccttgc caaacagcag
     9481 gcggcgaagc tggaaaatat gttcaacaat atgggcgaaa cccaggccca atctttgtcg
     9541 gtcatcatca aggcagacgt gcagggctct tacgaggctt tggcgggcag cctgaaaaaa
     9601 ctgtccacag acgaagtgaa agtgaacgtg ttgcacagcg gcgtgggcgg cattaccgaa
     9661 tcggatgtca acttggccat cgcttcgggc gcattcatta tcggctttaa cgtgcgtgca
     9721 gatgcctctt cgcgcaaact tgccgaaaat gaaaacgtgg aaatccgcta ctacaacatc
     9781 atctacgatg ccatcgacga cgtgaaggcg gcgatgagcg gcatgctttc tccggaagag
     9841 aaagaacaga ttaccggtac ggtcgaaatc cgtcaggtca tctccgtttc caaggtcggc
     9901 aacattgcag gctgtatggt taccgacggt gtggtcaaac gcgattccca tgcccgcctc
     9961 atccgcaaca acgtggttat ccataccggc gagctgtctt ctttgaaacg ctacaaagac
    10021 gatgttaaag aagtccgtat gggcttcgag tgcggcctga tgattaaagg cttcaatgaa
    10081 attatggaag gcgaccaact ggaatgcttc gacatcgtcg aagttgcacg caccctgtga
    10141 ttttgatgcg gaaaaatgcc gtctgaagcg ttcagacggc atacgaaacg ggttctgtat
    10201 catacagaac ccgttttttg tcgcaaatcg gcttcagaca gccctcttgc cttatcccga
    10261 tttgaatctg acttgccata caaacaggct tcagacggca ttatagtgaa ttaaatttaa
    10321 accggtacag cgttggctcg ccttgccgta ctatttgtac tgtctgcggc tcgccgcctt
    10381 gtcctgattt aaatttaatt cactatattt tcccgacagg cggatttgaa gtttctccac
    10441 atatccggcg cgttcggcgc ggctggtttc ggggcggtgc gtattgagcg acgaccattt
    10501 ccaatgactg cgggctttgt tgagttcggg cgggagtctg gtggcgtccc acggggcttt
    10561 gcggctgtgc agctcgatat ccgactgtgc cgcgtgtccg cgcgtttgca ggacgtggag
    10621 caaatcgagg gcgcgggcgg cgagcagggt cagggtttca gggtcggtgt gcaaggtttg
    10681 gcggccggag agtttgtcgg aaatggtgcg ggtattgggc aggatgccgc ccaaaaagcc
    10741 gccgattgcc gtacccaatc cgagcgagcc gccgagtgtg gcgatgtcca gccccaagcc
    10801 gatgagtgcg ccggttgccg cgcccgtgcc ggtgcggatg ccgtattgtt tgagcaattc
    10861 gctgtcgaac gggtcttggc ggaaggcttg cggcatccag tcgccgccgt cgatttcgct
    10921 gtggtagaaa cggtagaggg caaacagccg ctgctgcatc tgccgttcga gttggcgtat
    10981 ttccgcctgc atggtttgca gcacggtggc ggtatcctcg ttttcgtcca cttcctgcct
    11041 gaaggcggcg gcatcgagca ggaaatcggc gatttcgcgg cgcgcttcgc cgtccagccg
    11101 ctgccattcg cgccggcgca tggctgtcag gcggtcaagt gtgctgcgtt cgggcaacat
    11161 ggtggcgagg ttttcccaca ggcgtagttc gccttcaaaa tcaaaggcga cggtgtcgaa
    11221 ccctgcgaaa acgtgcaggt ttctcctcgc cagcatggtt gtccacgatt cgggaggctg
    11281 tccgccggta aagttgaaca cgggcataac cggtttggcg caccatgaaa ggataatcaa
    11341 ttcatcccga tatttgtcga gaacgggttc gcgcgcgtcg atgacgtaca ttgccatatc
    11401 gctttgcaag acttgccgta agactttggc ttcctgattg aaatcatggt gcgcgccgtg
    11461 gctgccgaga aactgttgca gccgttcgat gccgtctgaa cgattgtccg tatggttttc
    11521 cagccattcc agcacgccgc ccgcgtcttc gagtccgggc gtgtcgtaca ggaaaaccag
    11581 cgtgtctgcg ccgtcgctga tggcggcttc ttcgacatga cgcgtggtcg atggggcgtt
    11641 tctgacttcg ccgaaaccgc tgtcgcgcaa aagggtacgc aggagcgagg ttttgccggt
    11701 gttggtatgc ccgacgacgg cgagggaaag gggttgtttg ttcatgatgt ttttgaagaa
    11761 tggattttca gacgaccttt taaggatggc ggctttatgg ggcgtttcaa gtgcggtcgt
    11821 tggttttcag acggccttcc tgcgccgctc tgtcgggttc cagccacgcc gcgccgcatt
    11881 cggccagcgc gttacgccaa tgttccagct tttccgaaag gtcgtctgaa agcccctgtt
    11941 ccgccaaaag ctgcaccacc gcgccgccct gcgccgcttc cgagagtcgg acaatctgcc
    12001 gcaacacacc ccggtccggc acagtttggg cgcgcacgcc gataagcagt tgcgccggtt
    12061 tctgcttcaa ctccgcttcc agcgcggcga cctgttcccg attggcggca acacctttat
    12121 ccagccattc ctgcgccagc ctgccctcga accacgcgcc gtcctgccac tcggtctcca
    12181 acatgaccgc ccatttcggt gcatcgttca agatgatttt cggtgaaacg gcggacacgg
    12241 tttcccgacg cgtatccgca tcggtgattt tgttctgcca gcggcggatg accgcctgat
    12301 aatagggctt ttccaaatcc aagccgttct cgcttgtttt caaaaggatt ttacacacta
    12361 cccaagccag caggcgcggc aggatgccgt agcaggcgat actgccgacc agcagccccg
    12421 accaagcccg cgcatcggca atattgccgt tcagacgacc ttcgatgacc gctcgcgcat
    12481 caggcacggg aaaacccagt ttcgcaggca gccatgccaa catttccacc agccgtaccg
    12541 aagacgaatc gcccaacagc gtgctttccc agttgaacgt atattgccgc accaaaagca
    12601 gcaacaatac cgacaccagc attccgagca gcgtgcagag ccacaggctg tgcgacgttg
    12661 cgcctatttt ccaacgtacc gaaggttgcc gccactcgtc cgcatacagc cgcaacaccg
    12721 cctgatttac agggtctttg ccccgaaacc acgtcgccgg actgctgaaa aaacgcccca
    12781 ctttcacgcg caggaacaac attgccaacc atactgccaa cataagcgta ttcatgccca
    12841 acacgcccgc caaaatcagg aagaaattca gcccctgatt gtccattaga agataagtgc
    12901 ctgaaaatcc ggcggtaaac atcatcgatg ccgccaccac ccacaaccag aacgaccccg
    12961 cacgcacacg ttccaacgtc tcccgcagca tacggttcct gtcaatcatc tccgcccgac
    13021 ggatgatttt ttcctccgta ctgccgtcca cgcggcgcaa agcctccgtc gcctgcacgg
    13081 gatcgccgct gaaaataaag ccgccttctt ccaaaatacg gaccagctca accagttttc
    13141 gggatggatt caacataaaa tgccgtctga aaataaaaaa cagattttaa cacacgaatt
    13201 ttcaagaata ttcacagtgt aggcaaagag taaatcccac acagaggcaa aagtatcggc
    13261 gtaaactgac tgcctctact ttcccgaaag attgtgcgat gtatacaggc gaacgcttca
    13321 atacttacag ccatttgagc ggtttgattc tggcggcggc aggtttggtg ctgatgctgc
    13381 tgaaaaccat aggacacggg gacggctacc gtatcttcag cgtatcggtt tacggcatca
    13441 gccttcttct gctctatttg agttcctcgc tgtaccacgg aattgcagcc ggaaaactga
    13501 aaagcatttt gaaaaaaacc gaccactgca tgatttatgt cctgattgcc ggaagctaca
    13561 caccgtttgc actggtttct ttaagaaacg ggccgggctg gacggtattt tcactgtcct
    13621 ggctgctggc ggctgcagga atcgcacaag aactcaccat cggacggaaa agcgaaaaac
    13681 gtctgctgtc tattgtgatt tatgtcgtca tgggttggat ggtcttggcg gtaatgaaat
    13741 ccctgacagc ctcactcccg tcggcaggac tggcttggct ggcggcaggc ggtatgctgt
    13801 acagcgtcgg catttactgg tttgtaaacg atgaaaaaat ccgacacggg cacggaatct
    13861 ggcatctgtt cgtattgggc ggcagcatca cccaatttgt cagtgtgtac ggttatgtaa
    13921 tctgaatgcc gtctgaaaaa caaaacctcc cgatcctgaa gattgggagg ttttctgttt
    13981 gccggacatc agcccttgtc gtggaactcg tggaattcat acggataaga caaatcccga
    14041 cccgcttttt tctgtgccaa ataatcatca taaatggcac ggatttcctt acgcaacaaa
    14101 aacagggcta tcaagttcgg gataaccata aagccgttga acatatcgga caggctccaa
    14161 accaaatcga ctttgccgag cgtacctaaa acgatggcaa gcagaaccaa tgcgcgatag
    14221 atgcccaagt gtcttcccct gaaaagaaaa cggatgttgg actcaccgaa ataataccag
    14281 ccgataatgg tcgtcaaggc gaagaaggtc agacacacgg caagcaattg cgaaccgaag
    14341 cccggaaatg ccttgttaaa ggcaaattga gtaaccgccg cgccctgttc gcccgaaagg
    14401 ttggcatcgg tcagcaggat aatcagcgca gttgccgtac ataccaaaat cgtatcgata
    14461 aacacaccga caaatgccgc cataccttgc tgcacaggat gcttcacatc cgcagtcgcg
    14521 tgggcgtgcg gagtcgaacc catccccgcc tcattggaaa acagaccgcg cgccacgccg
    14581 aaacgtatcg cttcgcgcat accgataccc gccgcaccgc ccaaaacggc ttcgggattg
    14641 aaggcggcgg taaagatgtg gttgaacatc ggcacaatat ggtcggaaaa ttcaaacagg
    14701 ataacgacgg cgcacaaaat ataaacaacc gccataaacg gcacgacaaa ttgggcaata
    14761 ttggcaatac ggttcacgcc gccaatcaca accatgcccg caaggacggc aagcacaata
    14821 ccgactgcca aagaaggcac atcaaatgca atggtaacgg cagaagcaat ggagtttgcc
    14881 tgtgtcgcat taccgataaa gcccaatgcg ataatcaacg caatggaaaa gaaaccggac
    14941 aaaaaacgcg ccgctcccct gccgattttc ggagtcagac cgtgggtgat gtagaacgcc
    15001 ggcccgccga tgtatttgcc gtggctgacg acgcggtatt tctgcgccag cagtgcctcc
    15061 gcaaaaatcg tggacatccc caaaacggca gaaacccaca tccaaaaaat cgcgcccggc
    15121 ccgcctgcgg tgatggcggt cgccacgccg gcgacgttgc ccgtaccgat ttgcgcggat
    15181 atggcaaccg ccaacgcctg aaactgcgat aaagacttgt cgtctttatc gcctttggca
    15241 aacaagccgc cgaatacgga tttgaatccc gcgcccagct tggtaatctg cggcgcacca
    15301 agatacagcg taaaaaacag gccgataccc aaaagcgcgt aaatcagcag gtagtcccaa
    15361 aggaaccgat tgactgtacc caccagaaca gacaatatat tttccataaa ataaacctta
    15421 tcttacaatt aaaatgactg ccttccaaaa gacattccaa taaggaaaca cggcgagcag
    15481 accgtatttg ccgcaacaga tgccttaaat tgtcaacaat cggggagaag ctgcgccatc
    15541 ataccgtaaa atatcgttaa ttaaaacatt tctttatttt taagcggaaa gcggaggaaa
    15601 tcgctttcag acagcataga caacggcacg gcataaaaca ggatattttg ggtacttgca
    15661 acttatgtta aaatgccgac cgtaaaaaat ctgacaaaaa cagattaatt atttgaaata
    15721 agaaaggaaa tttatggcag gccatagcaa gtgggcgaat atccagcata aaaaagcccg
    15781 tcaggatgcc aaacgcggca aaatcttcac ccgtttaatc aaagaaatca ccgttgcggc
    15841 gcgtatgggc ggcggcgacc ccggtgccaa cccgcgcctg cgcctggctt tggaaaaagc
    15901 agccgaaaac aatatgccca aagacaatgt gcaacgcgcc atcgataaag gtacgggcaa
    15961 cttggaaggc gtggaataca tcgagttgcg ctacgaaggc tacggcatcg gcggcgcggc
    16021 tttgatggtg gactgcctga ccgacaacaa aacccgcacc gttgcggacg tacgccacgc
    16081 gtttaccaaa aacggcggca acttgggtac cgacggctgc gtggcgttca acttcgtgca
    16141 tcagggctat ttggtattcg aacccggcgt tgacgaagac gcgctgatgg aagcggcttt
    16201 ggaagccggt gcggaagacg tggttaccaa cgacgacggt tccatcgaag tcattaccgc
    16261 gccaaacgat tgggcgggcg taaaatccgc tttggaggcg gcaggttaca aatccgttga
    16321 cggcgacgtt acgatgcgcg cccaaaacga aaccgaactc tccggcgacg atgccgtcaa
    16381 aatgcaaaaa ctgattgacg cgctggaaga cttggacgac gtgcaagacg tttacacttc
    16441 cgccgtattg aatctggact gatacgcagc acagcagaca tacaataaaa tgccgtctga
    16501 acctttcaga cggcattgat ttatttagcc cttgcccacg cccaccaaac cgtcaggaca
    16561 accgccagaa aatacgccgc gctccaaaca ggcaaagcaa cccctaacag ataatccggt
    16621 tcggcacaat ttccgaaccc gcgcacgaca ggctcgaacc aatcaaacaa agaccagccc
    16681 ttcaagcgga acgtccacgg cgcaccgcac gaaggagccg tacccggcgg cagcgactgc
    16741 aaccacaact gatatgccgc aacagaaata cccgtaacgg ccggaatgct gataaagaca
    16801 gcaccgaaca aaccgcccgc ccttcttctt ggtctgcaca tcaggacaat tgccgtacac
    16861 aatgcggttg ccaaaacgca taaccgctga ctgatacaca aaacgcaagg ctccataccc
    16921 aaaacatact gtgccgccaa agaaccggca aatgcacaga ccgaaacggc aaacagcagc
    16981 caaacggctt ttctaaataa cggggtcatt ttctcaacac accaatcaaa ataccgatat
    17041 gccgattttg ctggatatat cccgagatgg caagggacga atcgacaccg gcgcaggtgc
    17101 ggacgatttc ggttttcccg atatacacaa gacctgacaa gggacaaaac ggcgatttgc
    17161 ccgcacaatg cccgcaaaaa aatacatccg gaggatttga atttcggcaa atttagcgaa
    17221 tcaaaagttt atttcaatga aattatatga tttttttgaa taagcggatt gacaggtttt
    17281 tgaaggaatt tgttaccgga tagccatcgg gcaagttttt tgcaaaattt gaatcggtcg
    17341 ggtaaatttt caaaaaataa ttgacagcgg ataagaaacg gcggataatt ctcgccgtcg
    17401 agttgcttga tgcagcttga tttttctcct ctatttctcc tttgtagact tggcacacat
    17461 tcaaccggat gtgtgcattt ttttatctcc gctttttttg aaatttaatt acttttattg
    17521 tttgaaattc cattctttaa gaaatttaac aagaaaaacg cttgcttttt gaccggaaaa
    17581 gctgcataat tcgttccgtt agctggttcg agtagtcagt taatagtttc tcctctattt
    17641 ctcctttgta gacttggcac acattctatt gaatgtgtgc atttttttat ctgaagcaac
    17701 aagcctctgt gcgtgatgtt gttatatttc atttaggtgt caaaccgcat atccggtctg
    17761 aaatattcaa tccaaatcca aaaccggatt ttctttgacc tcctccatca caacataact
    17821 cctactctcc gaagcggcag gcagttgcaa taggatattg cctagcatat cccgataggc
    17881 agacatatcg ggcaaacgta ctttaatcag atagtcgtat tcgcccgaca ccaagtggca
    17941 ttccataatt tgcggaattt tcagcacttc ttttttgaaa tcttcgaaaa tattgcccga
    18001 tttggattgc agcttcagct cgacaaaaac caatagtggt ttgcccaaca gatggggatt
    18061 gaggtgggcg tgatagccgg aaatataatg ttcccgctcc aaacggcgca ccctctctgt
    18121 aacgggcgtg gtggacaagc ctaccttctc ggcaagctcc gtcatcggga tgcgggcatt
    18181 ctgttgaagg atcttaagaa tgcggaaatc gattttatct agttctttca tttggattgc
    18241 cttgtattta ttattgattt taacaaatag agtatatagt ggattaacaa aaaccagtac
    18301 ggcgttgcct cgccttgccg tactatttgt actgtctgcg gcttcgtcgc cttgtcctga
    18361 tttttgttaa tccactatat atttgggaaa gcgattatat caggaaaagc aaaccgcctt
    18421 cctacctgaa aactgctgct tcggcttgaa gacacaaggg tctttaatat tttaaaagcc
    18481 ttgccgttgg attataattc cctaattgat ttcttaattt tgctaataaa cacttgcttg
    18541 gtaaggaatg aatttatgcg ccctttgaac gtgcagatca ggttgggcaa ccttaggcac
    18601 aattatcgga ttttaaagga aatgcacgga ggcaagctgt tggcggtagt gaaggccgac
    18661 gcatacggac acggtgcggt cagatgtgct ttcgcgctgg cagacttggc agacggcttt
    18721 gccgtggcga caatcgatga aggaatcagg ctgcgggaga gcggcattac ccatccgatt
    18781 gtccttttgg aaggcgtatt tgaagcatca gagtacgaag cggtcgaaca atactcgctc
    18841 tggccggcag tcggaaacca atggcaactt gaggctttgc tttcccgcca ttggaaaaaa
    18901 cctgtcaagg tctggttgaa aatggattcg ggaatgcacc gtaccggttt tttccctcat
    18961 gattacgctt cggcatatgc ggcattgaag cagtcggaat atgtggacag tattgtcaaa
    19021 ttctcgcatt tctcctgtgc ggacgaaccc gaaagcggta taacggaaat acagatggaa
    19081 gcattcgatt tgggtactga agggctggaa ggcgaagaaa gccttgccaa ctccgccgct
    19141 attttgaatg ttcccgaagc acgcagggac tgggggcgcg cgggcttggc gttgtacggc
    19201 atttccccgt tcggaggcag cgatgacagg ctgaaacccg tgatgaggct ttccacccgt
    19261 attttcggcg aacgcgtttt acagccgcac tcccctatcg gttatggcgc aacattttat
    19321 accagcaaat ctacgcgggt cggcctgatt gcctgcggtt atgcggacgg ttatccgcgc
    19381 cgtgccccaa gcaattcccc cgtcgccgtc gacggtaaat tgacccgggt catcggcagg
    19441 gtctctatgg atatgatgac catcgagctg gacgcttcac aagaaggttt gggacacgag
    19501 gtcgaactgt ggggcgatac ggtcaacatc aataccgttg ccgaagcggc cggaaccatc
    19561 ccttacgaat tgatgtgcaa tatcaaacgt gcaaaattca cttatatcga gtaaccgggt
    19621 tcaaacgaaa atgccgtctg aagcctttca gacggcataa atgcgttttg acaaaatcag
    19681 taaaagacat tgccaaatag aaaatactga taatgcccac aatctgaaac cccatccttc
    19741 ccgcaaaaac ggaaaatcaa aatcagaaac ctaaaatttc gtcattcccg cgcaggcggg
    19801 aatccggttt tttgagtttc cgtcatttct gataaattct cgtcgttttt catttctaga
    19861 ttcccgcctg cgcgggaatg acaaaattaa agtttcagaa tttatttgaa caacaaacta
    19921 gattcccact ttcgcgggga tgacggcgga taggttttgt tgtttcggat aaattcctgt
    19981 tgttttttgg tttccagatt cccaccttta aaagaatgac gtaagaaagc agaaataagg
    20041 acacagggat tttttaaatt tgcaatattc ttttctaaag acattttacc cgatgcctat
    20101 aaacaaaaat gccgtctgaa gcctttcaga cggcatttcc ccatcaaaac cgcaatcagt
    20161 ttttcatcga ttgaaccggt gcgggaatcc tgccgccccg gttgacgaac acttcgcatg
    20221 agccttcttt taccggcatt acaggcgcgt agcccaacag gccgccgaac tcgacgctgt
    20281 cgccgacggt tttaccggtt accggaataa tgcgcacggc agtggttttg ctgttgatca
    20341 tgccgatggc ggcttcgtcg gcaatgatgc cggaaatggt gtgcgcgggt gtgtcgccgg
    20401 gaacggcaat catatccaag ccgaccgaac aaacggcggt catggcttcg agtttgtcca
    20461 gcgtcagcac gcctgcttcg gcggcggcaa tcataccttc gtcttcggaa acggggataa
    20521 acgcgccact caaacccccg accgcgctgg aagccatcat gccgcctttt ttcacggcat
    20581 cgttcagcaa tgccaaagct gctgttgtgc cgtgcgtacc gcagacgctc aagcccattt
    20641 cttcaagaat gcgtgccact gagtcgccga cggcgggggt cggcgccagc gacaagtcga
    20701 gaataccaaa cgggatattc agcatttttg aggcttcgcg gccgatgagt tcgcccacgc
    20761 gggtaatttt gaaagcagtt ttcttcacta cttccgcaac ttcggtcaat gtcgttgcat
    20821 ctgaattttc caacgcggct tttacgacac ctgggccgga tacgccgaca ttgataacgg
    20881 catccgcttc gcccgaacca tgaaacgcgc ccgccataaa cgggttgtct tccaccgcgt
    20941 tgcagaacac gacaatttta gcgcagccga aaccttcggg cgtgatttcc gccgtgcgtt
    21001 tgacggtttc gcccgccagc ttgaccgcat ccatattgat accggcacgc gtactgccga
    21061 tattgatgga gctgcacaca atatcggtag tcttcatcgc ttcgggaatg gagcggatta
    21121 acacctcatc cgaaggcgac atcccttttt gcaccaacgc ggaaaaaccg ccgataaaag
    21181 acacaccgat ggctttggca gctttatcca aagtttgcgc cacgctgacg taagaatcag
    21241 catgggtggc cgccgcgatt tgggcaatcg gcgtaacgga aatgcgctga ttcacaatcg
    21301 gtacgccgta tttggcagac agatattttg ccgtagtgac caagtctttg ccgactgtgg
    21361 taattttatt gtaaatattt tggttcaaca cattgatatc gctgctgatg cagtcgtgca
    21421 aatcaatgcc gatggtaatg gtgcggacat caaaattctg gtcggcaacc attttgacgg
    21481 tttctaaaat ttcgccggat tggatactca tcacattcct ccaactcaaa tgcggtgcat
    21541 cgcttggaag atttcttcgt tttgcatacg gatatcaagc gcgagttttt tgctctcttc
    21601 cgcaaacaaa tccaaaacct cttgacgcga tttgctgcat tttgaagtgt ccaccaagat
    21661 aatcatagta aaaaaatcgt ccatcagctg ttggctgatg ttgagaatat tgatttggtt
    21721 ttccgccaaa attttggaaa catcgtacac gatgccgacg cggtctttac cgatgacggt
    21781 gatgactgaa ttgttcacag gcttactcct tgcagatatc cgttaaagtc cgaaattata
    21841 ccaccgttgg attttgaaga aatattgtca acaatatata catacaaaat gccgtctgaa
    21901 actatttcag acagcatcaa gattcagggt tcgattaaat aaccatcctt atcccactgg
    21961 gttttcctga ccaacttgtc atcctgataa acagcttcgc tctttttaga accatcttca
    22021 taccactcca aaaccacccc gttgcgttga tggtggcgga tagacagttc cgagagtaat
    22081 cggccgcttt catcccaagt cagaattttg gcaggctcat cgttgaccat aaccatttcc
    22141 gtcttgatac tgccgtcggc ataccattgc ttccatacgc cgtttgcctt attttgctta
    22201 aactggattt cgctttcctt gccgccgtta cggtaatagc ggtatcccgt accctcactc
    22261 aagccatttt tataaggcat aacggcagat tttttaccgt tcggatacca gttgacccac
    22321 tccccgtccg gcttaccctt gctgaagccc cccgccattt ttttctgacc attaaaatgc
    22381 cacaaaatca acataccgtt ttgcagggta ggcacaaaag atttgatttg cgttgaagca
    22441 acgatataag gttcagaata tttcttcatc gacggataat aaaaatcctg cgcgtgcgca
    22501 atacccgcca ccacactata ttgcctgata taagcggcag aagacatcgt cgccgtcagc
    22561 tttccgttct gattaaaata aacagaatag gtctgcgccg gcaaagcggc cgaaaaaccc
    22621 aacaggacag ttgaaaatac aatccgagat aattttttca ttgcaatagc gatataaaaa
    22681 caaggctgtg ttttagtaat ctgttgattt caattatttg caagggaaaa gacaattatt
    22741 ttccggttag gaataaacct attctattga atatattgaa gccaagtacg cctatcaaca
    22801 ctatattaaa acactgccaa aaacaattaa cttataaaca atatggtaag gatttctctg
    22861 ccaagcatca aacccgagac aacgtatcgt aaaaatgccg tctgaaaaca aatcgtcttc
    22921 agacggcatt tccccttcaa ctcactcttc acccaataac tgctcgcgcg tcaagaggaa
    22981 aacaaaaccg tcgcccccgc tggtttccaa ccaagtaaaa ggcaactccg gatacgctgc
    23041 ttccaataca tccctgttat gcccgatttc caccagcaat acacctttgg gattcagaaa
    23101 ctttgccgca ttcagaagaa tctgcctggt ggcatccaac ccgtccgccc cgctgcccaa
    23161 tgccaattcc ggttcgtgca aatactcttc aggcaataac tcaaccgatt ccgcatccac
    23221 ataaggagga ttggaaacaa tcaaatcata agtgccttcc aatccttcaa acaaatccgt
    23281 atgaataagc cggatgcgtt cttccaaacc ataatcttcg acattaatcc ctgccacttc
    23341 caaagcatcc aagctcacat caaccgcatc aatttgggca tcaggataat gatgcgccat
    23401 ctgaatggca aggcaaccgc ttccggtgca aagatccaaa gcattatgca ccaactcatc
    23461 gtattctatc caaggacgaa gtccgtcacc caacaattca taaataaaag aacgaggtat
    23521 gattacgcgc tcatccacat agaaatcaaa ctctccctgc catgcctggt gtgtcaaata
    23581 agcggctgga atgtgttcga cagcacgacg ctcaataacc gccagcactt cctctttttc
    23641 agcttccaag agttttgcat caagatatgg ggcaagcata tccaaaggca aattcaaagt
    23701 atgcagaatc aaataagctg cttcatcatg cgcattatct gttccatgac caaaaaagag
    23761 ccctgcctca ttaaaacggc tgactgcaaa acgtaaaata tcgcggatag tcgtcaattc
    23821 ttgtgctgcc tgattaaaca taatatgaac cattctgcgt atagatactt ttaattataa
    23881 cagaaacaac aagcaaacct tttcatatcg ccaaataacc acccaatcta cccatacaac
    23941 tacataaatg cccgcgcgaa aaccatcgcc cgaacggaaa cgacaatggc cgacggtatg
    24001 ggcaatctga ttggctggga aaaaacgggg cttgttgtcg gtaagcagtg gataaccgca
    24061 aaagacgaca aggtgtccga tgtctgcaat gccaacggcg agatgggcgt aatcgggctt
    24121 tacgagcctt tctcacacgg cgcattgacg atacccggtc atccgaactg ccgatgcgag
    24181 gttgtttccg tatcgggtgg cgaattgggg gaatttgccg aaaaaaagga gcttcgtaaa
    24241 gcggctatgc agtatgcgcg ggataacttt atcggcaaaa gctatgtcaa taaaaacagc
    24301 gggcatgaac tgaaggtaac ttggcaaggt gtgaaacacg ctgcgtcaaa ggcaaatcag
    24361 gcggaattat ccatcatgac aaaacttgat gacttattgc gctacgcaaa atatgagggt
    24421 tcttattcgg ataggaaagg tcatcctaat attattgcag cacataagta tcgtgccgtt
    24481 gccaaggttg ggaatgagtc tttaaatatc ggtgtgattg taagggaatt tccagacgac
    24541 cataaacatt acgaccattt catcttgaag gatgaataaa gcccttttgc agtgtcgttc
    24601 tggagcggat agcgttaagg caagtacact tccagccttg aaaaagggct ttaaattcag
    24661 catgccattt atacaggcag gagtaaaccc atgacaaagt tatacgcaga aatcgccaag
    24721 atggagacgc aggacgacga cacggtcaag gtttggggtt acgcttcaag cgaggaaatc
    24781 gattcggacg gcgaagtcat cgcggcggca gctatgaagg cggcgattcc cgattatatg
    24841 aagtttggcg cggggcgcga gatgcacggc tcaaacgctg cgggaacggc aattgaaatc
    24901 aacgttgaag acgacggcat aacctttttc ggtgctcata tcatcgaccc cgttgtcgtg
    24961 tcgaaagtca aaacaggcgt ttacaaaggc ttttccatcg gcggcagcgt taccgcccgc
    25021 gatgatttga acaagtcgca aatcacgggc ttgaagctga cggaaatcag ccttgtcgag
    25081 cgccctgcca atcccg
//
LOCUS       DBBZXU010000016        24554 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.016, whole genome shotgun sequence.
ACCESSION   DBBZXU010000016 DBBZXU010000000
VERSION     DBBZXU010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.016"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..228
                     /locus_tag="ACJJDE_000564"
     CDS             <1..228
                     /locus_tag="ACJJDE_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG7540541.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
     gene            246..557
                     /gene="rpsJ"
                     /locus_tag="ACJJDE_000565"
     CDS             246..557
                     /gene="rpsJ"
                     /locus_tag="ACJJDE_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HGG7540542.1"
                     /translation="MANQKIRIRLKAYDYALIDRSAQEIVETAKRTGAVVKGPIPLPT
                     KIERFNILRSPHVNKTSREQLEIRTHLRLMDIVDWTDKTTDALMKLDLPAGVDVEIKV
                     Q"
     gene            678..983
                     /locus_tag="ACJJDE_000566"
                     /pseudo
     CDS             678..983
                     /locus_tag="ACJJDE_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1247..1891
                     /gene="rplC"
                     /locus_tag="ACJJDE_000567"
     CDS             1247..1891
                     /gene="rplC"
                     /locus_tag="ACJJDE_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HGG7540543.1"
                     /translation="MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTD
                     GYTAVQVTFGQKKANRVNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVS
                     MFEVGQLVDVTGTSKGKGFSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFP
                     GKRMAGQYGNTKATVQKLEVVRVDAERQLLLVKGAVPGAVNSDVVVRPSVKVGA"
     gene            1891..2511
                     /gene="rplD"
                     /locus_tag="ACJJDE_000568"
     CDS             1891..2511
                     /gene="rplD"
                     /locus_tag="ACJJDE_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HGG7540544.1"
                     /translation="MELKVIDAKGQVSGSLSVSDALFAREYNEALVHQLVNAYLANAR
                     SGNRAQKTRAEVKHSTKKPWRQKGTGRARSGMTSSPLWRKGGRAFPNKPDENFTQKVN
                     RKMYRAGMATILSQLARDERLFAIEALTAETPKTKVFAEQVKNLGLEQVLFVTKQLDE
                     NVYLASRNLPNVLVLEAQQVDPYSLLRYKKVIITKDAVAQLEEQWV"
     gene            2508..2822
                     /gene="rplW"
                     /locus_tag="ACJJDE_000569"
     CDS             2508..2822
                     /gene="rplW"
                     /locus_tag="ACJJDE_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HGG7540545.1"
                     /translation="MNQQRLTQVILAPIVSEKSNVLAEKRNQMTFKVLANATKPEIKA
                     AVELLFGVQVASVTTVTTKGKTKRFGRTLGRRSDVKKAYVSLAAGQELDLEAAAAAAD
                     KE"
     gene            2828..3661
                     /gene="rplB"
                     /locus_tag="ACJJDE_000570"
     CDS             2828..3661
                     /gene="rplB"
                     /locus_tag="ACJJDE_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HGG7540546.1"
                     /translation="MAIVKMKPTSAGRRGMVRVVTEGLHKGAPYAPLLEKKNSTAGRN
                     NNGHITTRHKGGGHKHHYRVVDFKRNKDGIPAKVERIEYDPNRTAFIALLCYADGERR
                     YIIAPRGIQVGAVLVSGAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGA
                     SAVLLAKEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIRP
                     TVRGVVMNPVDHPHGGGEGRTGEAREPVSPWGTPAKGYRTRNNKRTDNMIVRRRYSNK
                     G"
     gene            3668..3946
                     /gene="rpsS"
                     /locus_tag="ACJJDE_000571"
     CDS             3668..3946
                     /gene="rpsS"
                     /locus_tag="ACJJDE_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HGG7540547.1"
                     /translation="MARSLKKGPYVDLHLLKKVDAARASNDKRPIKTWSRRSTILPDF
                     IGLTIAVHNGRTHVPVFISDNMVGHKLGEFSLTRTFKGHLADKKAKKK"
     gene            3955..4284
                     /gene="rplV"
                     /locus_tag="ACJJDE_000572"
     CDS             3955..4284
                     /gene="rplV"
                     /locus_tag="ACJJDE_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HGG7540548.1"
                     /translation="MRVNAQHKNARISAQKARLVADLIRGKDVAQALNILAFSPKKGA
                     ELIKKVLESAIANAEHNNGADIDELKVVTIFVDKGPSLKRFQARAKGRGNRIEKQTCH
                     INVTVGN"
     gene            4294..4986
                     /gene="rpsC"
                     /locus_tag="ACJJDE_000573"
     CDS             4294..4986
                     /gene="rpsC"
                     /locus_tag="ACJJDE_000573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HGG7540549.1"
                     /translation="MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLR
                     QKLANASVGRVVIERPAKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVN
                     IEEIRRPELDAQIIADGIAQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGA
                     DIARSEWYREGRVPLHTLRANVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESK
                     QRKAGRRNAAAN"
     gene            4970..5386
                     /gene="rplP"
                     /locus_tag="ACJJDE_000574"
     CDS             4970..5386
                     /gene="rplP"
                     /locus_tag="ACJJDE_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HGG7540550.1"
                     /translation="MLQPTRLKYRKQQKGRNTGIATRGNKVSFGEFGLKAVGRGRLTA
                     RQIEAARRAMTRHIKRGGRIWIRVFPDKPITEKPIQVRMGGGKGNVEYYIAEIKPGKV
                     LYEMDGVPEELAREAFELAAAKLPIPTTFVVRQVGQ"
     gene            5386..5577
                     /gene="rpmC"
                     /locus_tag="ACJJDE_000575"
     CDS             5386..5577
                     /gene="rpmC"
                     /locus_tag="ACJJDE_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009175233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HGG7540551.1"
                     /translation="MKANELKDKSVEQLNADLLDLLKAQFGLRMQNATGQLGKPSELK
                     RVRRDIARIKTVLTEKGAK"
     gene            5577..5840
                     /gene="rpsQ"
                     /locus_tag="ACJJDE_000576"
     CDS             5577..5840
                     /gene="rpsQ"
                     /locus_tag="ACJJDE_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HGG7540552.1"
                     /translation="MSETKNVRTLQGKVVSDKMDKTVTVLVERKVKHPLYGKIIRLST
                     KIHAHDENNQYGIGDVVVISESRPLSKTKSWVVSELVEKARSI"
     gene            6062..6430
                     /gene="rplN"
                     /locus_tag="ACJJDE_000577"
     CDS             6062..6430
                     /gene="rplN"
                     /locus_tag="ACJJDE_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HGG7540553.1"
                     /translation="MIQMQTILDVADNSGARRVMCIKVLGGSKRRYASVGDIIKVAVK
                     DAAPRGRVKKGDVYNAVVVRTAKGVRRPDGALIKFDNNAAVLLNNKLEPLGTRIFGPV
                     TRELRTERFMKIVSLAPEVL"
     gene            6442..6765
                     /gene="rplX"
                     /locus_tag="ACJJDE_000578"
     CDS             6442..6765
                     /gene="rplX"
                     /locus_tag="ACJJDE_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HGG7540554.1"
                     /translation="MNKIIKGDRVVVIAGKDKGKQGQVVRVLGDKVVVEGVNVVKRHQ
                     KPNPMRGIEGGIITKEMPLDISNIAILNPETNKADRVGIKLIENEGKVKRVRFFKSNG
                     SIIGA"
     gene            6775..7314
                     /gene="rplE"
                     /locus_tag="ACJJDE_000579"
     CDS             6775..7314
                     /gene="rplE"
                     /locus_tag="ACJJDE_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HGG7540555.1"
                     /translation="MARLREFYKETVVPELVKQFGYKSVMEVPRIEKITLNMGVGEAV
                     ADKKVMEHAVSDLEKIAGQKPVVTVARKSIAGFKIRDNYPVGCKVTLRRDQMFEFLDR
                     LITIALPRVRDFRGVSGKSFDGRGNYNMGVREQIIFPEIEYDKIDALRGLNITITTTA
                     KTDEEAKALLSLFKFPFKG"
     gene            7317..7622
                     /gene="rpsN"
                     /locus_tag="ACJJDE_000580"
     CDS             7317..7622
                     /gene="rpsN"
                     /locus_tag="ACJJDE_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HGG7540556.1"
                     /translation="MAKKALINRDLKRQALAKKYAAKRAAIKAVINDSNATEEERFEA
                     RLRFQSIPRNAAPVRQRRRCALTGRPRGTFRKFGLGRIKIREIAMRGEIPGVVKASW"
     gene            7638..8030
                     /gene="rpsH"
                     /locus_tag="ACJJDE_000581"
     CDS             7638..8030
                     /gene="rpsH"
                     /locus_tag="ACJJDE_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HGG7540557.1"
                     /translation="MSMHDPISDMLTRIRNAQRANKAAVAMPSSKLKCAIAKVLKEEG
                     YIEDFAVSSDVKSILEIQLKYYAGRPVIEQIKRVSRPGLRIYKASSEIPSVMNGLGIA
                     IVSTSKGVMTDRKARSQGVGGELLCIVA"
     gene            8044..8577
                     /gene="rplF"
                     /locus_tag="ACJJDE_000582"
     CDS             8044..8577
                     /gene="rplF"
                     /locus_tag="ACJJDE_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HGG7540558.1"
                     /translation="MSRVAKNPVTVPAGVEVKFGTEALVIKGKNGELSFPLHSDVAIE
                     FNDGKLTFVANNSSKQANAMSGTARALVSNMVKGVSEGFEKRLQLIGVGYRAQAQGKI
                     LNLSLGFSHPIVYEMPEGVSVQTPSQTEIVLTGSDKQVVGQVAAEIRTFRAPEPYKGK
                     GVRYVGEVVVMKEAKKK"
     gene            8591..8944
                     /gene="rplR"
                     /locus_tag="ACJJDE_000583"
     CDS             8591..8944
                     /gene="rplR"
                     /locus_tag="ACJJDE_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HGG7540559.1"
                     /translation="MDKHTTRLRRARKTRARIADLKMVRLCVFRSNNHIYAQVISAEG
                     DKVLAQASTLEAEVRGSLKSGSNVEAAAIVGKRIAEKAKAAGVEKVAFDRSGFQYHGR
                     VKALAEAARENGLSF"
     gene            8963..9481
                     /gene="rpsE"
                     /locus_tag="ACJJDE_000584"
     CDS             8963..9481
                     /gene="rpsE"
                     /locus_tag="ACJJDE_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HGG7540560.1"
                     /translation="MAKHEIEERGDGLIEKMVAVNRVTKVVKGGRIMAFSALTVVGDG
                     DGRIGMGKGKSKEVPVAVQKAMDQARRSMIKVPLKNGTIHHEVIGRHGATKVFMQPAK
                     EGSGVKAGGPMRLVFDAMGIHNISAKVHGSTNPYNIVRATLDGLSKLHTPADIAAKRG
                     LTVEDILGVNHG"
     gene            9474..9659
                     /gene="rpmD"
                     /locus_tag="ACJJDE_000585"
     CDS             9474..9659
                     /gene="rpmD"
                     /locus_tag="ACJJDE_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HGG7540561.1"
                     /translation="MAEQKKIRVTLVKSLIGTIESHRACARGLGLCRREHTVEVLDTP
                     ENRGMINKISYLLKVES"
     gene            9661..10095
                     /gene="rplO"
                     /locus_tag="ACJJDE_000586"
     CDS             9661..10095
                     /gene="rplO"
                     /locus_tag="ACJJDE_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HGG7540562.1"
                     /translation="MFLNTIQPAVGATHAGRRVGRGIGSGLGKTGGRGHKGQKSRSGG
                     FHKVGFEGGQMPLQRRLPKRGFKSLTASANAQLRLSELESIAVNEIDILVLKQAGLIA
                     STVSNVKVIASGEISKAVALKGIKVTKGARAAIEAVGGKIEM"
     gene            10107..11417
                     /gene="secY"
                     /locus_tag="ACJJDE_000587"
     CDS             10107..11417
                     /gene="secY"
                     /locus_tag="ACJJDE_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HGG7540563.1"
                     /translation="MANQQTSSGSSKFGDLKKRLLFLFGALIVFRIGAHIPVPGVDAV
                     ALAKLYESAGNGILGILNMFSGGSLERFSIFAIGIMPYISASIIVQLASEILPSLKAL
                     KKEGEAGRKVITKYTRYGTVLLAILQSLGVASFVFQQGIVVTSSFEFHVSTVVSLVTG
                     TMFLMWLGEQITERGIGNGISLIITAGIASGIPSGIAKLVTLTNQGSMSMLTALFIVF
                     GALLLIYLVVYFESAQRKIPIHYAKRQFNGRAGSQNTHMPFKLNMAGVIPPIFASSII
                     LFPSTLLGWFGSADTNSVLHKIAGLLQHGQLLYMALFAATVIFFCYFYTALVFSPKEM
                     AENLKKSGAFVPGIRPGEQTSRYLEKVVLRLTLFGALYITTICLIPEFLTTVLNVPFY
                     LGGTSLLILVVVTMDFSTQINSYRLTQQYDKLMTRSEMKSFSRK"
     gene            11422..11640
                     /gene="infA"
                     /locus_tag="ACJJDE_000588"
     CDS             11422..11640
                     /gene="infA"
                     /locus_tag="ACJJDE_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HGG7540564.1"
                     /translation="MAKEDTIQMQGEILETLPNATFKVKLENDHIVLGHISGKMRMHY
                     IRISPGDKVTVELTPYDLTRARIVFRAR"
     gene            11661..11774
                     /gene="rpmJ"
                     /locus_tag="ACJJDE_000589"
     CDS             11661..11774
                     /gene="rpmJ"
                     /locus_tag="ACJJDE_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006232360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HGG7540565.1"
                     /translation="MRVQPSVKKICRNCKIIRRNRVVRVICTDLRHKQRQG"
     gene            11840..12202
                     /gene="rpsM"
                     /locus_tag="ACJJDE_000590"
     CDS             11840..12202
                     /gene="rpsM"
                     /locus_tag="ACJJDE_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HGG7540566.1"
                     /translation="MARIAGVNIPNNAHIVIGLQAIYGIGATRAKLICEAANIAPDTK
                     AKDLDETQLDALRDQVAKYEVEGDLRREVTMSIKRLMDMGCYRGFRHRRGLPCRGQRT
                     RTNARTRKGPRKAIAGKK"
     gene            12222..12617
                     /gene="rpsK"
                     /locus_tag="ACJJDE_000591"
     CDS             12222..12617
                     /gene="rpsK"
                     /locus_tag="ACJJDE_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HGG7540567.1"
                     /translation="MAKANTASRVRKKVRKTVSEGIVHVHASFNNTIITITDRQGNAL
                     SWATSGGAGFKGSRKSTPFAAQVAAEAAGKVAQEYGVKNLEVRIKGPGPGRESSVRAL
                     NALGFKITSITDVTPLPHNGCRPPKKRRI"
     gene            12637..13257
                     /gene="rpsD"
                     /locus_tag="ACJJDE_000592"
     CDS             12637..13257
                     /gene="rpsD"
                     /locus_tag="ACJJDE_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HGG7540568.1"
                     /translation="MARYIGPKCKLARREGTDLFLKSARRSLDSKCKIDSAPGQHGAK
                     KPRLSDYGLQLREKQKIRRIYGVLERQFRRYFAEADRRKGSTGELLLQLLESRLDNVV
                     YRMGFGSTRAEARQLVSHKAIVVNGQVVNIPSFQVKAGDVVSVREKAKKQVRIQEALG
                     LATQIGLPGWVSVDADKLEGVFKNMPDRSELTGDINEQLVVEFYSK"
     gene            13283..14269
                     /gene="rpoA"
                     /locus_tag="ACJJDE_000593"
     CDS             13283..14269
                     /gene="rpoA"
                     /locus_tag="ACJJDE_000593"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HGG7540569.1"
                     /translation="MQNSTTEFLKPRQIDVNTFSATRAKVSMQPFERGFGHTLGNALR
                     RILLSSMNGFAPTEVAIAGVLHEYSTVDGIQEDVVDILLNIKGIVFKLHGRSQVQLVL
                     KKSGSGVVSAGDIELPHDVEILNPGHVICHLADNGQIEMEIKVEQGRGYQSVSGRQVV
                     RDENRQIGAIQLDASFSPISRVSFEVEPARVEQRTDLDKLVLDIETDGSIDPEEAVRS
                     AARILIDQMSIFADLQGTPVEEVEEKAPPIDPVLLRPVDDLELTVRSANCLKAEDIYY
                     IGDLIQRTETELLKTPNLGRKSLNEIKEVLASKGLTLGSKLEAWPPVGLEKP"
     gene            14293..14661
                     /gene="rplQ"
                     /locus_tag="ACJJDE_000594"
     CDS             14293..14661
                     /gene="rplQ"
                     /locus_tag="ACJJDE_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HGG7540570.1"
                     /translation="MRHRNGNRKLNRTSSHRAAMLRNMANSLLTHETIVTTLPKAKEL
                     RRVVEPLITLGKKPSLANRRLAFDRTRDRDVVVKLFGDLGPRFTARNGGYVRVLKYGF
                     RKGDNAPLALVELVDKPAAE"
     gene            14808..15521
                     /gene="minC"
                     /locus_tag="ACJJDE_000595"
     CDS             14808..15521
                     /gene="minC"
                     /locus_tag="ACJJDE_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA];
                     GO_process: GO:1901891 - regulation of cell septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HGG7540571.1"
                     /translation="MMVYIMNAFDIKSTKMDVLSISLHTSDLFDLEDVLVKLGKKFQE
                     SGVVPFVLDVQEFDYPESLDLAALVSLFSRHGMQILGLKHSNERWAAAAMKYHLLFCL
                     SHSENVKELGQVEVQNTEDGQKARKTVLITSPVRTGQQVYAEDGDLIVTGAVSQGAEL
                     IADGNMHIYAPMRGRALAGAKGDTSARIFIHSMQAELVSVAGIYRNFEQDLPDHLHKQ
                     PVQILLQDNRLVISAIGSE"
     gene            15550..16365
                     /gene="minD"
                     /locus_tag="ACJJDE_000596"
     CDS             15550..16365
                     /gene="minD"
                     /locus_tag="ACJJDE_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HGG7540572.1"
                     /translation="MAKIIVVTSGKGGVGKTTTSASIATGLALRGYKTAVIDFDVGLR
                     NLDLIMGCERRVVYDLINVIQGEATLNQALIKDKNCENLFILPASQTRDKDALTREGV
                     EKVMQELSGKKMGFEYIICDSPAGIEQGALMALYFADEAIVTTNPEVSSVRDSDRILG
                     ILQSKSHKAEQGGSVKEHLLITRYSPERVAKGEMLSVQDICDILHIPLLGVIPESQNV
                     LQASNSGEPVIHQDSVAASEAYKDVIARLLGENREMRFLEAEKKSFFKRLFGG"
     gene            16369..16632
                     /gene="minE"
                     /locus_tag="ACJJDE_000597"
     CDS             16369..16632
                     /gene="minE"
                     /locus_tag="ACJJDE_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HGG7540573.1"
                     /translation="MSLIEFLFGRKQKTATVARDRLQIIIAQERAQEGQAPDYLPTLR
                     KELMEVLSKYVNVSLDNIRISQEKQDGMDVLELNITLPEQKKV"
     gene            16636..17556
                     /gene="oxyR"
                     /locus_tag="ACJJDE_000598"
     CDS             16636..17556
                     /gene="oxyR"
                     /locus_tag="ACJJDE_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator OxyR"
                     /protein_id="HGG7540574.1"
                     /translation="MTLTELRYIVAVAQERHFGRAARRCFVSQPTLSIAIKKLEEELA
                     VSLFDRSSNDIITTEAGERIVAQARKVLEEAELIRHLANEEQNELEGAFKLGLIFTVA
                     PYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPFQEPGIVTEPL
                     YDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQ
                     GLTNTLQGSSINTIRHMVASGLAISVLPATALTENDHMLFSIIPFEGTPPSRRVVLAY
                     RRNFVRPKALSAMKAAIMQSQLHGVSFIRD"
     gene            complement(17887..20724)
                     /locus_tag="ACJJDE_000599"
     CDS             complement(17887..20724)
                     /locus_tag="ACJJDE_000599"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HGG7540575.1"
                     /translation="MLDKYSPAEIESKHYQNWESQGYFQPDMDLTKPSFSIQLPPPNV
                     TGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQLAAQNVSRH
                     NLDREKFLEKVWEWKEVSGGTITQQMRRVGCSADWTREYFTMDDVRAETVTEVFVRLY
                     EQGLIYRGKRLVNWDPVLGTAVSDLEVESVEEQGSMWHIRYPLADNPAEAVIVATTRP
                     ETLLGDVAVAVNPEDERYTHLIGKELILPLTGRTIPVIADEYVEKDFGTGCVKITPAH
                     DFNDYEVGKRHDTRLVNVFDLEAKVLANAEVFNFKGEAQPSFAMPEKYAGLDRFAARK
                     QMVADLQEQGFLVEIKAHTLMTPKGDRTGSVIEPMLTSQWFVAMSATPNGGEPDSEFK
                     GLSLADKAKKAVDSGAVRFIPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDEAG
                     NVYVARNQVEAEKQAGKTGLTREEDVLDTWFSSALVPFSTLGWPSETDELKAFLPSNV
                     LVTGYEIIFFWVARMIMMTTHFTGKVPFKDVYIHGIVRDHEGKKMSKSEGNVIDPVDL
                     IDGIGLEKLLVKRTTGLRKPETAPKVEEATKKLFPEGIPSMGADALRFTMASYASLGR
                     SVNFDFKRAEGYRNFCNKIWNATNFVLMNTENQDCGYGATAAEPRGYSFPDMWIVGRL
                     NQTIEQVTQAYETYRFDLAAETLYSFVWNDYCDWYLELAKVQLQTGCASRQRATRHTL
                     LRVLEAALRLLHPIIPFITEELWQTVAPMCDAKTADSIMLARFPEADGGDIVQTAFGQ
                     MTVLQDLIGAVRNLRGEMGIQPNVKAPLFVESADDLADYLKYLPMMTRLTEAQQVATL
                     PESEDAPVAVCNGARLMLKVEIDKATETARLSKEAEKLQKALDKLNAKLSKPGYTEKA
                     PAHLVEKDKADLAELEDKMAKVQTQLSKLKD"
     gene            complement(20821..21630)
                     /gene="zupT"
                     /locus_tag="ACJJDE_000600"
     CDS             complement(20821..21630)
                     /gene="zupT"
                     /locus_tag="ACJJDE_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HGG7540576.1"
                     /translation="MPDFSMSNLAVAFSITLAAGLFTVLGSGLVMFSKTPNPRVLSFG
                     LAFAGGAMVYVSLTEIFSKSSEAFAEIYDKDHAFAAATMAFLAGMGGIALIDRLVPNP
                     HETLDAQDPSFQESKRRHIARVGMMAAFAITAHNFPEGLATFFATLENPAVGMPLALA
                     IAIHNIPEGISIAAPVYFATRSRKKTVWACLLSGLAEPLGAALGYLVLQPFLSPAVFG
                     SVFGVIAGVMVFLALDELLPAAKRYSDGHETVYGLTMGMAVIAVSLVLFHF"
     gene            complement(21811..23067)
                     /locus_tag="ACJJDE_000601"
     CDS             complement(21811..23067)
                     /locus_tag="ACJJDE_000601"
                     /EC_number="1.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008718 - D-amino-acid dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055130 - D-alanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HGG7540577.1"
                     /translation="MKVLVLGAGVAGVSSAWYLAEAGHEVTVIDRAKGVAMETSFANA
                     GQLSYGYTTPWAAPGIPTKALKWLFKSHPPLLFRPDGSLYQIEWLWRMLQNCTAAHYQ
                     TNKERMVRISEYSREMFRRFEAQTGMNFEGRKKGTLQIFRQAKEVEAAEQDIAVLERY
                     GVPYRRLKPEECAEFEPALARVTAKIAGGLHLPADATGDCRLFTENLYKLCQEKGVRF
                     HFNQTISRIDHNGLRIKTVETETGRFEADAVVCALGCFSRTVLAQLDLNLPIYPVKGY
                     SLTLPVTNSDGAPVSTVLDESYKVAITRFDNRIRVGGMAELSGYEIKLPEKRRETLAL
                     VVNDLFPEGGDLSQASFWSGLRPMTPDSTPLIGRTRFDNLFLNTGHGTLGWTMSLGSA
                     KLTADIVSGKDTEIRSDDLSLSRYQA"
     gene            complement(23146..24537)
                     /locus_tag="ACJJDE_000602"
     CDS             complement(23146..24537)
                     /locus_tag="ACJJDE_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7540578.1"
                     /translation="MQVFLDNLKAFFETVSGWVWGSVMLMLLVGTGIVLTVMLKGLQF
                     TMLGYALKQAFVPSKKYEGGEGHEGDISHFAALMTALSATIGTGNIAGVATAVVTGGP
                     GAVFWMWMTAIFGMATKYGEGVLAVKYRVNNSKGEMSGGPMYYIEKGLGKNWKWMAVA
                     FALFGTFASFGIGSSVQSNSVAQAVQTSFGIEPAYTGITLTVLTAVVVLGGIKGIAKA
                     ASFIVPAMAVFYVLGGLSIIAINSDALMPAVKLIFSDAFSAQAVAGGAIGTVIRYGVA
                     RGVFSNEAGMGSAPIAAAAAKTDHPVRQALVSMTGTFLDTIVVCSITGIVLVMGLLGA
                     GGEFVKPEVSGAALTTVTFQKMLPGIGGWIVTIGLIFFAYSTILGWCYYGEKCAVYVF
                     GEKFAGLYRVGYVSSVMLGTVLSLDLVWLASDTFNGLMALPNLIALLLMAKVIVNETR
                     DFKQKITNGELPH"
BASE COUNT         6381 a         5248 c         6218 g         6707 t
ORIGIN      
        1 cataccccgt tcttcgctaa ctaccgtccg caattctact tccgtaccac cgacgtaact
       61 ggcgcggtta ctttggaaga aggtgtagaa atggtaatgc cgggtgaaaa cgtaaccatc
      121 accgtagaac tgattgcgcc tatcgctatg gaagaaggtt tgcgctttgc gattcgcgaa
      181 ggcggccgta ccgtgggtgc cggcgtggtt tcttctgtta tcgcttaatt gaaggatatt
      241 gataaatggc aaaccaaaaa atccgtatcc gcctgaaagc ttatgattac gccctgattg
      301 accgttctgc acaagaaatc gttgaaactg caaaacgtac cggtgcagtt gtaaaaggcc
      361 cgattccttt gccgaccaaa atcgagcgtt tcaacatttt gcgttctccg cacgtgaaca
      421 aaacttcccg tgagcaattg gaaatccgca cccacttgcg cctgatggac atcgtggatt
      481 ggaccgataa aactaccgat gcgctgatga agctggattt gccggccggt gttgatgtag
      541 aaatcaaagt ccaataattc ggactattga aaatccccaa gcaatcaatg cttggggatt
      601 ttttatgtta tgccgagacc tttgcaaaat tccccaaaat cctctaaatt cccaccaaga
      661 catttagggg atttctcatg agcaccttct tccagcaaac cgcccaagcc atgattgcca
      721 gacacatcga ccgtttcccg ctattgaagt tggaccaggt gattgattgg cagccgatcg
      781 agcagtacct gaaccgtcaa aaaacccgtt acctccgaga ccaccgcggt cgtcccgcct
      841 gtcccctgtt gtccatgttc aaagccgtcc tgctcggaca atggcacaac ctctccgatc
      901 ccgaactcga acacagcctc atcacccgca tcgatttcaa cctgttttgc cgttttgacg
      961 aactgagcat ccccgattac agtcatcaac catattccgg tttgtcggag aaagatgcat
     1021 acgctgtgat gaccggatac cgacccttta aaagagtccg accctatgcc gtctgaaaat
     1081 tcaaaacgct tcagacggca tattgaagat atttctgata tttctgttga tatttcttta
     1141 acttgtcaga tataatgccg agcttggtac atttgtgcca agtttaactt tgtctgaaag
     1201 acaggccaat cgcagcctgt ccctttactt taaaaggaaa ataatcatga ctttaggtct
     1261 ggttggacgc aaagttggta tgacccgcgt gttcgacgaa cagggtgttt ctgttccggt
     1321 aaccgttttg gatatgtcag ccaaccgcgt cacacaagta aaatccaaag atactgacgg
     1381 ctatactgcc gttcaagtta cctttggtca gaaaaaagcc aatcgtgtca acaaagccga
     1441 agccggacac tttgcaaaag caggtgttga agccggtcgc ggtttgattg agtttgcttt
     1501 gactgaagaa aaattagctg aattgaaagc cggtgacgaa atcaccgttt ctatgtttga
     1561 agttggtcaa ctggtcgatg taaccggtac ctctaaaggt aaaggtttct ccggtacgat
     1621 caaacgtcat aacttcggcg cccagcgtac ttcccacggt aactcccgtt ctcaccgtgt
     1681 tccaggctct atcggtatgg cgcaagaccc gggtcgcgtg ttccccggta aacgcatggc
     1741 cggccaatac ggcaacacca aagcaactgt tcaaaaattg gaagttgtcc gtgttgacgc
     1801 agaacgccaa ctgctgttgg ttaagggtgc tgttccaggt gcggtcaaca gcgatgttgt
     1861 agttcgtccc agcgtgaaag taggtgcgta atggaattga aagtaattga cgctaaagga
     1921 caagtttcag gcagtctgtc tgtttctgat gctttgttcg cccgcgaata caatgaagcg
     1981 ttggttcatc agctggtaaa tgcctacttg gcaaacgccc gctctggtaa ccgtgctcaa
     2041 aagacccgtg ccgaagtaaa acactcaacc aaaaaaccat ggcgtcaaaa aggtaccggt
     2101 cgcgcccgtt ccggtatgac ttcttctccg ctgtggcgta aaggcggtcg cgcgttcccg
     2161 aacaaacccg acgaaaactt cactcaaaaa gtaaaccgca aaatgtaccg tgccggtatg
     2221 gcgactattc tgtcccaatt ggctcgtgac gagcgtttgt ttgcgattga ggcgttgact
     2281 gccgaaactc ctaaaaccaa ggtttttgct gaacaagtga aaaatctagg tctggagcaa
     2341 gtgttgtttg taaccaaaca gctcgacgag aatgtttact tggcttcacg caacttgcca
     2401 aacgtgttgg ttttggaagc tcaacaagtt gatccttata gcttgctgcg ttacaaaaaa
     2461 gtaatcatca ctaaagatgc agttgcacaa ttagaggagc aatgggtatg aatcaacaac
     2521 gtttgactca agtgattttg gcacctatcg tttctgaaaa aagcaacgta ttggctgaaa
     2581 aacgcaacca aatgacgttt aaggttttgg caaatgcaac caaacctgaa atcaaagctg
     2641 ctgttgagct gctgtttggt gttcaagttg cttctgtaac taccgttaca actaaaggca
     2701 aaactaagcg ttttggtcgt actttgggcc gccgcagcga tgttaaaaaa gcttatgtaa
     2761 gcttggctgc cggtcaagag ttggatttgg aagccgctgc tgcagctgca gataaggaat
     2821 aaacaaaatg gcaatcgtta aaatgaagcc gacctctgca ggccgtcgcg gcatggttcg
     2881 cgtggtaaca gaaggtttgc acaaaggtgc accttatgcg cctttgcttg aaaagaaaaa
     2941 ttctactgcc ggccgtaaca ataatggtca tatcaccacc cgtcacaaag gcggcggtca
     3001 taaacaccat taccgtgttg tagactttaa acgtaacaaa gacggcattc ctgccaaagt
     3061 agagcgtatc gaatacgatc ctaaccgtac tgccttcatc gcactgttgt gctatgcaga
     3121 cggcgagcgt cgttacatca tcgctcctcg cggtattcaa gtcggtgccg tattggtttc
     3181 cggtgctgaa gctgccatca aagtaggcaa caccctgccg atccgcaaca ttcccgttgg
     3241 tacgactatc cactgtatcg aaatgaaacc cggtaaaggt gctcaaatcg cacgttctgc
     3301 cggtgcttct gcggtattgc tggctaaaga aggcgcgtac gctcaagtcc gcctgcgctc
     3361 tggcgaagtc cgtaaaatca acgtagattg ccgtgcaacc atcggtgaag tcggtaacga
     3421 agagcaaagc ctgaaaaaaa tcggtaaagc cggtgccaat cgttggcgcg gtattcgtcc
     3481 gactgtacgt ggtgttgtca tgaaccctgt cgatcacccg catggtggtg gtgaaggccg
     3541 tacgggcgag gcccgcgaac cggtcagccc atggggtact cctgctaaag gctaccgcac
     3601 tcgtaataac aaacgcacgg ataacatgat tgttcgtcgc cgttactcaa ataaaggtta
     3661 atttagtatg gctcgttcat tgaaaaaagg cccatatgta gacctgcatt tgctgaaaaa
     3721 agtagatgct gctcgcgcaa gcaacgacaa acgcccgatt aaaacctggt ctcgtcgttc
     3781 taccattctg cctgatttta tcggtctgac cattgctgtg cacaacggcc gcacccatgt
     3841 gcctgtgttt atcagcgaca atatggttgg tcataaatta ggcgaattct cattgacccg
     3901 tacctttaaa ggccacttgg ccgataaaaa ggctaaaaag aaataaggtg aatcatgaga
     3961 gtaaatgcac aacataaaaa tgcccgtatc tctgctcaaa aggctcgttt ggtagctgat
     4021 ttgattcgtg gtaaagacgt tgcccaagct ttgaatattt tggctttcag tcctaaaaaa
     4081 ggtgccgagc tgattaaaaa agtattggag tcagctattg ctaatgccga gcacaataac
     4141 ggtgcggaca ttgatgaact gaaagtggta actatctttg ttgacaaagg cccaagcttg
     4201 aaacgttttc aagctcgcgc caaaggtcgc ggtaaccgca tcgaaaaaca aacttgtcat
     4261 atcaatgtga cagtgggtaa ctaaggaaaa gctatgggac aaaagattaa ccctacaggc
     4321 tttcgcctgg cggtaactaa agactgggct tcaaaatggt ttgctaaaag caccgacttt
     4381 tctactgttt tgaagcagga tatcgatgtt cgcaattatt tgcgtcaaaa attggccaat
     4441 gcttcggttg gtcgagtggt tattgaacgc cctgcaaaat ctgcacgcat taccattcac
     4501 tccgctcgtc cgggtgtggt tatcggtaaa aaaggtgagg atatcgaggt tttgaaacgt
     4561 gacttgcaag tcttgatggg tgtacctgtt catgtaaata ttgaagagat tcgccgtcct
     4621 gagttggatg ctcaaattat tgctgacggt attgcccagc agttggaaaa gcgcgttcaa
     4681 ttccgtcgtg ctatgaaacg agcaatgcaa aatgcaatgc gttctggtgc taaaggcatt
     4741 aagattatga cttcaggccg tctgaatggt gcggatattg cccgtagcga atggtatcgt
     4801 gaaggtcgcg tgccactgca tactttacgt gcaaatgtag attatgcaac cagcgaagcg
     4861 cacaccacat atggtgtatt gggtctgaaa gtttgggttt atacggaagg caatattaaa
     4921 tcttccaaac ctgaacatga gagtaaacaa agaaaggcag gtagacgtaa tgctgcagcc
     4981 aactagactg aaataccgta agcaacaaaa gggtcgcaat actggcatcg ctactcgcgg
     5041 taataaggta agtttcggtg agttcggctt gaaagccgta ggtcgtggtc gtttgactgc
     5101 ccgtcaaatc gaagctgctc gtcgtgcaat gacccgtcat atcaaacgtg gtggtcgtat
     5161 ttggattcgt gtattccctg ataaaccgat tactgaaaag cctattcaag ttcgtatggg
     5221 tggcggtaaa ggtaacgtgg aatattacat tgccgaaatt aaaccaggta aagtgttgta
     5281 tgaaatggat ggcgttccag aggaactggc tcgtgaagca ttcgagttgg ctgctgccaa
     5341 attgcctatt cctacaacct ttgtagtaag acaggtgggt caataatgaa agcaaatgaa
     5401 ttgaaagaca aatccgttga gcagttgaat gcagatttgt tggacttgtt gaaagctcag
     5461 tttggcttac gtatgcaaaa cgctaccggt caattaggca aaccaagtga attgaaacgt
     5521 gtacgtcgcg atattgctcg tattaaaacc gttttaactg aaaaaggtgc taagtaatga
     5581 gcgaaactaa aaatgttcgt actttgcaag gcaaagtagt aagcgacaaa atggataaaa
     5641 ccgtaacagt attggttgag cgtaaagtaa aacatccgct gtatggtaag attattcggt
     5701 tatctactaa aatccatgcc catgatgaaa ataatcaata tggaattggt gatgtggttg
     5761 ttatatcgga atcccgtcca ttgtcaaaaa ctaaatcttg ggttgtcagt gagctggttg
     5821 agaaagcacg ttctatttaa gaattaaagc aacgtgcttg gaatgggaaa cgaagtattg
     5881 cagcaaattt aatttgcgtg taaacttcgt ttcctgtctt tcagtttctt ctggaagttt
     5941 cttccctttc ggggtccaag actggtttac ttgaaccgca aggtttcatt taataagcag
     6001 cggctttgct gtaagttatc tgaaagtggt aaattaagtt ggttaattta aaggtaataa
     6061 catgattcaa atgcagacca tcttagatgt ggctgataac tctggtgcgc gtcgcgtaat
     6121 gtgtatcaag gtattgggcg gatctaagcg tcgctacgct tctgttggcg atattattaa
     6181 agtggcagtt aaagatgcgg ctccgcgtgg ccgtgtcaaa aaaggcgatg tatataatgc
     6241 ggtagttgtt cgtactgcta agggtgtacg tcgtcctgat ggtgcgttaa ttaaattcga
     6301 taacaatgcc gccgtgttac tgaataataa acttgaacct ttgggtactc gtatctttgg
     6361 tccggtaacc cgtgaattgc gtactgagcg atttatgaaa atcgtttcat tggcacctga
     6421 agtattataa ggaatggcac gatgaataaa atcattaaag gcgatagggt tgtagtaatt
     6481 gctggtaagg ataaaggtaa gcagggtcaa gtagttcgag tgttgggtga taaagttgtt
     6541 gttgagggcg ttaatgttgt aaaacgccat caaaaaccta atccaatgcg tggcattgag
     6601 ggcggtatta ttactaaaga aatgcctttg gatatttcta atatcgcaat cctgaatccg
     6661 gaaactaata aagcggaccg tgttggtatt aagctgattg aaaatgaagg caaagttaaa
     6721 cgcgttcgtt tcttcaaatc aaatggctct atcattgggg cataaggaga taacatggct
     6781 cggttgagag agttttataa agagacagtt gttcctgaat tggttaaaca atttggttac
     6841 aaatcagtaa tggaagtccc gcgtattgaa aaaattacct tgaatatggg tgtgggtgag
     6901 gctgttgctg ataaaaaagt tatggaacat gctgtttccg atttagagaa aattgccggt
     6961 caaaaaccgg ttgttactgt tgcccgtaaa tctatcgcag gttttaaaat ccgtgataac
     7021 tatccggttg gttgcaaagt aacattgcgt cgtgatcaaa tgtttgaatt cttggatcgt
     7081 ttgattacta ttgcattacc tcgcgtacgt gacttccgtg gtgtgagcgg taaatcattt
     7141 gatggccgtg gcaattacaa tatgggtgtt cgtgagcaaa ttatttttcc ggaaattgaa
     7201 tacgataaaa ttgatgcttt gcgtggtttg aatattacta ttactactac agcaaaaacc
     7261 gatgaggaag cgaaagcttt attgtcattg tttaaatttc cgttcaaagg ataatcatgg
     7321 ctaagaaagc acttattaat cgtgatctga aacgtcaagc tttggctaaa aaatatgcgg
     7381 ctaaacgcgc ggcaattaaa gcggtaatca atgattcgaa tgcaactgag gaagagcgtt
     7441 ttgaggctcg tttgaggttt caatccattc ctcgtaatgc ggcacctgtg cgtcaacgtc
     7501 gtcgttgtgc tttgacaggt cgccctcgtg gtactttccg taaatttggt ttgggtcgta
     7561 ttaaaatccg tgaaatcgcc atgcgtggcg aaattccggg tgttgttaaa gccagctggt
     7621 aataggagta attaagaatg agtatgcatg atcctatttc cgatatgttg actcgtatcc
     7681 gcaatgcgca acgtgctaat aaagcagcgg ttgcaatgcc ttcttcaaaa ttaaagtgtg
     7741 ctattgcaaa ggtattgaaa gaagaaggat atattgagga cttcgcagtt tcatctgacg
     7801 taaagtctat attggaaatt caattaaaat actatgcagg tcgtcctgta attgaacaaa
     7861 tcaagcgtgt atctcgccct ggtttgcgta tttataaagc gtctagtgag attccaagtg
     7921 ttatgaatgg cttgggtatt gctattgtta gtacttctaa aggtgtaatg actgatcgta
     7981 aagcacgttc tcaaggtgtt ggtggtgagt tgttatgcat tgtagcctag tggaggaaaa
     8041 gaaatgtcac gtgtcgcaaa aaacccagtg actgttcccg ctggtgtaga agtaaaattt
     8101 ggaacagagg cattagttat taagggtaag aacggtgaat tgtcttttcc tttgcattct
     8161 gatgtagcca ttgaatttaa tgatggcaaa ttgacttttg ttgcgaataa cagcagtaaa
     8221 caagcaaatg caatgtctgg tactgctcgc gcattagtca gcaatatggt taaaggtgtt
     8281 tcagaaggtt ttgagaaaag attgcaattg ataggtgtgg gttatcgtgc tcaagcacaa
     8341 ggtaaaatct tgaatctgtc tttgggtttt tctcatccga tcgtatatga aatgcctgaa
     8401 ggtgtctccg ttcaaactcc tagccaaaca gagattgttt taaccggctc ggataaacaa
     8461 gttgttggtc aagttgctgc tgagattcgt acgttccgtg ctcctgagcc ttataaaggt
     8521 aaaggtgttc gctatgtagg cgaagtagtg gtaatgaaag aagccaagaa aaaataattg
     8581 aggttcacta atggataaac atacaacccg actccgtcgt gcacgcaaaa cccgtgctcg
     8641 tattgcggac ttgaaaatgg taagattatg tgtgttccga agcaataatc atatttatgc
     8701 tcaagtaatt agtgctgaag gtgataaagt attggctcaa gcctctacat tggaagctga
     8761 ggtgcgcggt agtctgaaat ctggaagcaa tgttgaagca gctgcaatag ttggtaaacg
     8821 tattgctgag aaggctaaag cagcaggtgt agaaaaggtt gcttttgatc gttcaggttt
     8881 ccaatatcac ggtcgtgtga aggctttggc tgaagctgct cgtgaaaatg gtttaagctt
     8941 ctaaatattt ggagactttc agatggcaaa acatgaaatt gaagaacgcg gtgacggtct
     9001 gattgaaaag atggtcgcag ttaaccgtgt aaccaaagta gttaaaggtg gtcgcattat
     9061 ggctttctct gcgctaactg ttgttggtga tggagatggt cgtattggta tgggtaaagg
     9121 taagtcaaaa gaagtgcctg ttgcagtcca aaaggcgatg gatcaagcac gacgctctat
     9181 gattaaggta ccattaaaaa atggtacgat tcatcatgag gttattggtc gacatggtgc
     9241 tactaaagta tttatgcagc ctgctaaaga gggtagtggc gtaaaagccg gtggacctat
     9301 gcgtttggtt tttgatgcta tgggcattca taatatctcc gccaaagtgc acggatctac
     9361 taacccatat aatatcgtac gtgcaacatt agatggtttg tctaagttgc atactcctgc
     9421 tgatatcgca gccaaacgtg gcttgacagt ggaagacatt ttgggagtta accatggctg
     9481 aacaaaaaaa gattagggtt acattggtta aaagcctgat tggtacaatt gaatctcatc
     9541 gtgcatgtgc acgcggttta ggtttgtgtc gtcgcgagca tacggtagag gttttagata
     9601 cccctgaaaa ccgtggtatg attaataaaa tcagctactt gttgaaagtg gagtcttgat
     9661 atgtttttga atacaattca acctgctgtt ggtgctacgc atgctggtcg tcgtgttgga
     9721 cgcggtattg gtagtggtct tggcaaaacg ggtggtcgtg gtcataaagg tcaaaagagc
     9781 cggtctggtg ggtttcataa ggtgggtttc gagggtggtc aaatgccctt gcaacgacgc
     9841 ctccctaaaa gaggttttaa atctttaaca gcatcagcta atgcacagct tcgtttaagt
     9901 gaactggaat caattgctgt taatgagatt gatattttgg tcttaaagca agcgggtctg
     9961 attgcatcta cagtctctaa tgttaaagtt attgcttctg gtgaaatttc taaggcagtt
    10021 gctttgaagg gtattaaagt taccaaaggt gcgagagctg ctatcgaggc tgttggtggt
    10081 aagattgaaa tgtaaggttt aatattgtgg ctaatcaaca aacgtcatca ggttcatcca
    10141 aatttggaga tcttaagaaa cgtcttttgt ttctatttgg agcattgatt gtttttcgaa
    10201 ttggtgccca tatacccgta cctggagttg atgctgttgc tttagctaaa ttatacgaaa
    10261 gcgctggaaa cggcatcctg ggaatattga atatgttttc cggtgggtcg ttagagcgct
    10321 ttagtatatt tgcaatagga attatgccat atatttcagc ttctattatt gtacagctcg
    10381 cttctgaaat tttgccatca ttgaaggctt taaaaaaaga aggggaggct ggtagaaagg
    10441 taattacgaa atatactagg tatggtactg ttttgttagc aattcttcaa agtctaggtg
    10501 ttgcatcttt cgtatttcag caaggaattg ttgtaacaag ttcatttgag tttcatgttt
    10561 ccacggtagt ttctttggta acgggaacca tgtttcttat gtggcttggg gagcaaatta
    10621 ctgaaagggg tatcgggaac ggtatttctt taatcattac ggcaggtatt gcttcaggta
    10681 ttccttcggg tattgcaaag ctggttacac tgacgaacca aggttctatg agcatgctta
    10741 cggcgttgtt tattgtattt ggtgccttat tattaattta tttggttgta tactttgaaa
    10801 gtgcacagcg gaagattcct attcattatg caaaacgcca gtttaatggt agggcgggta
    10861 gtcaaaatac gcatatgcct ttcaagttga atatggctgg tgttattccc ccaatttttg
    10921 cttccagtat tattctattt ccatctactc ttttaggttg gtttggttcg gctgatacaa
    10981 atagtgtttt gcacaaaata gctggattgt tacaacacgg tcaattgctg tatatggctt
    11041 tatttgcagc gacagttatt ttcttttgtt atttttatac ggctttggtt tttagcccta
    11101 aagaaatggc agagaattta aaaaagagtg gtgcttttgt tcctgggatt agacctggtg
    11161 agcagacctc taggtattta gaaaaagttg tattacgttt gacattgttt ggagctcttt
    11221 atattacaac tatttgttta attccagagt tcttaactac ggttttaaat gtaccttttt
    11281 atttgggtgg cacgtctttg ttgattctag ttgttgtaac gatggatttt agtacacaaa
    11341 taaattcgta taggcttact caacagtatg ataagttaat gactcgttca gaaatgaaat
    11401 cattttctcg gaaatagaat tatggcgaaa gaagatacta tccaaatgca aggtgaaatt
    11461 cttgaaactt tacctaatgc aacatttaaa gtaaaacttg agaatgacca tattgtattg
    11521 ggtcatattt ctgggaagat gcggatgcat tacattcgta tttctccggg agataaggtc
    11581 acagtagagc tgacacctta tgatctaact agggctcgaa tcgttttcag agcaagataa
    11641 accaataaaa ggaaaataaa atgcgtgtac aaccatctgt taagaaaatt tgccgaaatt
    11701 gcaagattat tcgtcgaaat cgtgtagttc gtgtaatttg tactgatctc cgtcacaaac
    11761 agcgtcaagg ttaatggaat atttctttta atgtgattct gtgatatagt gacacacttt
    11821 gccctaaaaa ggaaaaaata tggctcgtat tgcaggggta aatatcccta ataacgcaca
    11881 catcgtaatt ggtcttcagg ctatttacgg tattggtgct actcgtgcta aattgatttg
    11941 tgaggctgca aatattgcgc ctgatactaa agcaaaagat ttggacgaga ctcaattaga
    12001 tgctttgcgt gaccaagttg ccaagtatga agtagaaggt gatttgcgtc gtgaggtaac
    12061 tatgagtatc aagcgattga tggacatggg ctgctatcgt ggcttccgtc atcgtcgcgg
    12121 cttaccatgc cgcggtcaac gcactcgtac aaatgcgcgt acccgcaaag gtccgcgtaa
    12181 agcgattgct ggtaagaaat aaattttaag gaattttatt aatggctaaa gcaaacacag
    12241 cttcacgtgt acgtaaaaaa gtacgtaaaa ccgtgagtga gggtattgtg cacgttcatg
    12301 catctttcaa caataccatc attacaatca ctgaccgtca aggcaatgcg ttgtcttggg
    12361 ctacctctgg cggcgctggt tttaaaggtt ctcgtaaaag tacaccattt gcagcacaag
    12421 ttgcagcaga agcagctggt aaagttgccc aagagtatgg cgttaaaaat ttagaggttc
    12481 gtattaaagg tccaggtcca ggtcgtgaat cctctgtacg tgctttgaat gctcttggtt
    12541 tcaagattac cagcattact gacgttaccc cgttgcctca taacggttgc cgtccgccta
    12601 aaaaacgtcg tatttaatat tggagtgatt tgaaacatgg cacgttatat tggccctaaa
    12661 tgtaagttgg cacgtcgcga aggtacggat ttgtttttga agagtgcgcg ccgctctttg
    12721 gattccaaat gtaaaattga ttccgctccc ggtcagcatg gtgcaaaaaa accgcgtttg
    12781 tcagactatg gtttgcagtt gcgtgaaaaa caaaaaatcc gccgtattta tggcgtatta
    12841 gaacgtcagt tccgtcgtta tttcgcagaa gctgatcgtc gtaaaggttc taccggcgag
    12901 ttgctgttgc agttgctgga atctcgtttg gataatgtcg tttatcgtat gggtttcggt
    12961 tctacccgag ctgaagcaag acagcttgtt tctcataagg cgatagttgt gaatggacaa
    13021 gttgtcaata ttccttcttt ccaagtgaaa gctggtgatg ttgtctcagt tcgtgaaaaa
    13081 gccaaaaaac aggtacgtat tcaagaagca ttgggtttgg caactcaaat cggcttgccg
    13141 ggttgggttt ctgtagatgc ggataaactt gagggtgtgt tcaaaaacat gccggatcgc
    13201 tcggaattga ccggtgatat taatgaacag ctggtggtag agttctactc taaataatgc
    13261 tagctcagtg agggacagtt aaatgcagaa tagcacaacc gaatttttga aacctcgtca
    13321 aattgatgta aatacttttt ctgcaactcg tgcaaaagta tctatgcagc catttgaacg
    13381 tggtttcggt cataccttag gtaatgcttt gcgccgtatc ttactgtcat ccatgaatgg
    13441 ttttgctcct actgaagtag ctattgccgg tgtattacac gaatattcta ctgttgatgg
    13501 tattcaggaa gatgttgttg acattttgct gaatattaaa ggtattgtgt ttaaactcca
    13561 tggtcgtagc caagttcaac ttgtgttgaa gaaatcaggt tcaggtgtcg tatctgccgg
    13621 tgatattgag ttgccgcatg atgtagaaat tctgaatcct ggtcatgtca tttgtcattt
    13681 ggctgataac ggtcaaattg agatggaaat taaagtagag caaggtcgtg gttatcaatc
    13741 tgtttcaggt cgtcaggtag ttcgtgatga gaaccgtcag attggtgcaa tccagttgga
    13801 tgcgagcttt tcgcccatca gccgtgttag ctttgaggtt gaacctgcac gtgtagagca
    13861 gcggacggat cttgataagt tggttttgga tatcgaaacc gacggttcta ttgatcctga
    13921 ggaagctgta cgcagtgcgg cacgtatttt gattgatcag atgtctattt ttgctgattt
    13981 gcagggtact cctgtggagg aggttgaaga aaaagcacct cctatcgacc ctgttctttt
    14041 gcgtccggtg gatgatctgg aattgacagt acgttcagct aattgtttga aagctgagga
    14101 tatttattat attggcgatt tgattcaacg cactgaaacc gagcttctta aaacgccgaa
    14161 tttgggacgt aaatctttga atgagattaa ggaagtattg gcatctaaag gtttgacact
    14221 gggttctaag ttggaagcat ggccacctgt aggcttggaa aagccttaat gaagaattaa
    14281 aggataattg atatgcgtca tcgtaatggc aatcgcaaat taaaccgtac cagcagtcat
    14341 cgtgctgcaa tgctgcgtaa tatggcgaat tcattattga ctcacgaaac tattgtaaca
    14401 actctgccta aggccaagga attgcgccgt gtagtagagc cgttgattac attgggtaaa
    14461 aagccgtcat tggcaaaccg ccgtttggca tttgaccgta ctcgcgaccg tgatgttgta
    14521 gtaaaactgt ttggcgattt gggtcctcgt tttactgctc gtaacggtgg ttatgttcgg
    14581 gtgttgaaat acggattccg taaaggtgat aatgcacctc tggcactggt tgaattggtt
    14641 gacaaaccgg ctgctgagta attttagtca tataacgcca tctgccgaaa agcaggtggc
    14701 gttatttttg caatatctga taggtaatag ggtattggct atcatgttta aaatattaat
    14761 tgaatagcta aggtttgcgc ggtaaactta catcattaaa aaattctatg atggtttata
    14821 taatgaatgc tttcgatata aagtcgacaa agatggacgt attgtctata tctttgcata
    14881 cgtcagactt gtttgatttg gaagatgtgc tggtcaaatt gggcaagaag tttcaagagt
    14941 ctggtgttgt tccatttgtg ctggatgttc aagagtttga ttatcccgag tctttggatc
    15001 ttgctgcatt ggtttcgttg ttttcaaggc atggtatgca aattttgggt ctgaagcatt
    15061 ctaatgaacg ttgggctgct gcggctatga agtatcattt gctgttttgt ctgtctcatt
    15121 cggaaaatgt taaagaactg ggtcaggttg aggtgcagaa cacggaggat ggtcagaaag
    15181 caaggaaaac agtattgatt acatcccctg tccgtaccgg tcagcaggtt tatgccgaag
    15241 atggcgattt gattgttacg ggggcggtca gccagggggc ggaattgatt gcagatggca
    15301 atatgcatat ttatgcgccg atgagagggc gtgctttggc cggtgccaaa ggcgatactt
    15361 ctgcccgcat atttatccac tccatgcagg cagaactggt ttctgtggcg ggtatttacc
    15421 gtaattttga acaggatttg ccggaccatc tgcacaagca gccggtacag atattgttgc
    15481 aggataaccg attggttatc agtgcaattg gctcagaata attgtttgat attttaaaaa
    15541 ggaaatattg tggcaaaaat tattgtagta acttcaggta agggcggtgt cggtaaaacg
    15601 actaccagtg ccagtattgc gacaggtttg gcattacgcg gatataaaac tgcggtaatt
    15661 gattttgatg tgggtttgcg taacctcgac ctcattatgg gttgcgagcg tcgtgtcgtt
    15721 tatgacctga tcaatgtcat tcagggggag gcgacgctca accaggcttt gattaaagat
    15781 aaaaattgtg aaaacctgtt tattttgccg gcttcccaga ctcgggataa agacgctttg
    15841 acacgcgagg gagtagaaaa agtgatgcag gagctgtccg gcaagaaaat gggctttgag
    15901 tatattattt gcgactctcc tgccggtatt gagcagggtg cattgatggc gttgtatttt
    15961 gctgatgaag ccattgtaac gaccaatcct gaggtttcca gtgtgcgtga ctccgacagg
    16021 attttgggaa ttttgcaaag caaatcccat aaggcagagc aaggcggttc ggttaaagaa
    16081 catctgttga ttacgcgtta ttctcccgaa cgtgtggcaa aaggcgaaat gctgtctgta
    16141 caggatattt gcgatattct gcatatccct ttgctgggtg tgattcctga atcccaaaac
    16201 gtcttgcagg catccaattc cggagaaccg gtcatccatc aggacagcgt ggcggcttcc
    16261 gaggcatata aggacgttat tgcccgtctt ttgggcgaga accgtgaaat gcgcttcttg
    16321 gaagctgaga aaaaaagctt cttcaaacgt ctgtttggag gataaggtat gtcattaatc
    16381 gaatttttat tcggcagaaa gcagaaaacg gcaaccgttg cccgcgaccg ccttcaaatc
    16441 atcattgccc aagagcgcgc ccaagaaggt caggctccgg attacctgcc gactttacgt
    16501 aaagagttga tggaagtcct gtccaaatat gtgaacgttt cattagacaa tatccgtatt
    16561 tcccaggaaa aacaggatgg tatggatgtg cttgagttga acattacttt gccggaacag
    16621 aaaaaggtat aggacatgac cttaaccgaa ttgcggtaca tcgtcgcagt cgcccaagaa
    16681 cgtcatttcg gcagggcggc gcggcgttgt tttgtcagtc agcccacttt gtctattgcc
    16741 attaagaaat tggaagaaga gcttgccgtc tctttgtttg accggagcag caacgatatt
    16801 attacgaccg aggcggggga acgtatcgtt gcacaggcgc gtaaggtatt ggaagaggcg
    16861 gagcttatca ggcatttggc aaatgaagaa caaaacgagc tggagggtgc gttcaaactc
    16921 gggctgattt ttacggttgc gccgtacctg ctgccgaaac tgattgtctc gttgcgccgt
    16981 actgcaccga aaatgccttt gatgttggaa gagaattaca cgcatacttt gaccgagtcg
    17041 ctcaaacgcg gggacgttga tgcgattatc gttgccgaac cgtttcaaga gccgggcatt
    17101 gttaccgaac ccttgtatga cgaaccgttt ttcgtgattg tcccgaaagg gcattcattt
    17161 gaggaactgg atgccgtttc gccccggatg ctgggtgagg agcaggtttt gctgctgacg
    17221 gaaggcaact gtatgcggga tcaggtactc tcaagctgtt ccgaattggc ggcgaaacaa
    17281 cgcatacagg ggttgaccaa tacattgcag ggcagctcga tcaatacaat ccgccatatg
    17341 gtcgccagcg gtttggcaat cagcgtgtta ccggcaaccg cgctgaccga aaacgatcat
    17401 atgctgttca gcattattcc gtttgaaggt acgccgccaa gccggcgggt cgtattggcg
    17461 taccgccgca attttgtccg tccgaaggcg ttgtcggcga tgaaggcggc gattatgcag
    17521 tcgcagcttc acggggtaag ttttatccgc gactaggcgc aggcattgtt ttcaaaacgc
    17581 catttccctg agccgacaac acggtatgcc aagatattgc cgtcatcatc gattttgagt
    17641 atagcatcgc cacggaaact gccgtcctga agatattcga cttttgcatc actgtgaatg
    17701 ttttcatcag tgccgatgca atgccatgta tagtggatta aatttaaacc agtacggcgt
    17761 tgcctcgcct tgccgtacta tttgtactgt ctgcggcttc gtcgccttgt cctgattttt
    17821 gttaatccac tataaaagag gccgtctgaa aaacattttt cagacggcct tgttgattca
    17881 atcaaatcag tctttcaact tcgacaactg agtttgcact tttgccattt tgtcttccaa
    17941 ttccgccaaa tcggctttgt ctttttccac caaatgcgcc ggggcttttt cggtgtagcc
    18001 gggtttggag agtttggcgt tgagtttgtc caaggctttt tgcagctttt cggcttcttt
    18061 gctcaaacgg gcggtttcgg tggctttgtc gatttcgact ttcagcatca ggcgcgcgcc
    18121 gttgcagacg gcgacgggcg cgtcttcgct ttcgggcagg gtggcgactt gctgtgcttc
    18181 ggtcagtcgg gtcatcatcg gcaggtattt gaggtagtcc gccaagtcgt ctgcgctttc
    18241 gacaaacagc ggggctttca cgttgggctg gatgcccatt tcgccgcgca ggttgcggac
    18301 tgcgccaatc aaatcctgta acacggtcat ttgcccgaat gccgtctgaa caatatcgcc
    18361 gccgtcggct tcggggaagc gggcgagcat gatgctgtcg gcggttttcg cgtcgcacat
    18421 aggggcgacg gtttgccaca gttcttcggt gatgaacggg ataatcgggt gcagcaggcg
    18481 cagggcggct tcgagtacgc gcaataaggt atggcgtgtg gcgcgttggc ggctggcgca
    18541 gccggtttgg agctgcactt tggcaagttc cagataccag tcgcaatagt cgttccacac
    18601 gaagctgtac agggtttccg ccgccaaatc aaagcggtag gtttcgtagg cttgcgttac
    18661 ttgctcgatg gtctgattca gacggcctac aatccacata tcggggaagg agtagccgcg
    18721 cggttcggca gcggttgcgc cgtaaccgca gtcttggttt tcggtgttca tcaagacgaa
    18781 gttggtggcg ttccagattt tgttgcagaa gttgcggtag ccttcggcgc gtttgaagtc
    18841 gaagttgacc gaacgcccca agctggcgta gctcgccata gtgaagcgca aagcgtccgc
    18901 gcccatactc ggaatgcctt cggggaagag ttttttcgtg gcttcttcca ctttcggcgc
    18961 ggtttcgggt ttgcgcaggc cggtggtgcg ttttaccagc agtttttcca agccgatgcc
    19021 gtcgatcaaa tccacagggt caatgacgtt gccttcggat ttggacattt ttttgccttc
    19081 gtggtcgcgc acgatgccgt ggatatacac gtctttaaac ggtactttgc cggtgaagtg
    19141 ggtggtcatc ataatcatac gcgccaccca gaagaagatg atttcgtagc cggtaaccaa
    19201 gacgttggac ggcaggaagg ctttgagttc gtcggtttca gacggccagc cgagcgtgga
    19261 gaacggcacg agcgcggagg agaaccaagt gtccaatacg tcttcttcgc gggtcaagcc
    19321 tgttttgccg gcttgttttt cggcttccac ctgattgcgg gcgacgtaaa cattgcctgc
    19381 ttcgtcgtac cacgcgggga tttgatgccc ccaccacagt tggcgcgaga tgcaccagtc
    19441 ttggatgttg ttcatccatt ggttgtaggt gttgacccag ttttcgggga taaagcgtac
    19501 cgcgccgctg tcgacggctt ttttggcttt gtcggcgagg ctcaagcctt tgaattcgct
    19561 gtcaggctcg ccgccgtttg gcgtagcgga catggcgaca aaccattggc tggtcagcat
    19621 cggctcaatc actgagcctg ttcggtcgcc tttcggcgtc atcagcgtgt gcgctttgat
    19681 ttcgaccaag aaaccttgtt cctgcaaatc ggcaaccatt tgtttgcgcg cggcaaagcg
    19741 gtccaagcct gcgtattttt caggcatggc aaagcttggt tgcgcttcgc ctttgaagtt
    19801 gaacacttcg gcgtttgcca atactttggc ttccaagtcg aacacattaa ccaagcgcgt
    19861 atcgtggcgt ttgccgactt cgtagtcgtt gaagtcgtgc gcaggcgtga ttttcacgca
    19921 gccggtgccg aagtcttttt caacgtattc gtcggcaatc acgggaatgg tgcggccggt
    19981 cagcggcagg attaattctt tgccgattaa gtgggtataa cgttcgtctt cgggattgac
    20041 ggcaacggca acgtcgccca acagcgtttc gggacgggtg gtggcgacga tgacggcttc
    20101 ggcaggattg tccgccagcg gatagcggat gtgccacata gagccttgtt cttccacgct
    20161 ttccacttcc aaatcagaca ctgcggtacc caataccgga tcccagttca ccaagcgttt
    20221 gccgcgataa atcaagccct gttcatacag gcgtacgaac acttcggtta cggtttcggc
    20281 gcgtacatcg tccattgtga aatactcgcg cgtccagtcg gcagaacagc ccacacggcg
    20341 catctgctgc gtaatcgtgc cgccggaaac ttctttccat tcccacactt tttccaagaa
    20401 tttttcacga tccaagttat gacgggacac gttttgcgcg gcaagctgac gctcgaccac
    20461 gatttgcgtg gcgatgcccg cgtggtcggt gccgggaatc caggcggtgt tgcagccttt
    20521 catacggtag tagcgggtca ggccgtccat aatggtttgg ttgaaggcat gacccatgtg
    20581 cagcgtgccg gttacattgg gcggcggcag ttggatggaa aaagacggtt tggtcaaatc
    20641 catatcaggt tggaaatagc cttggctttc ccagttttga tagtgcttgg attcgatttc
    20701 ggcgggggag tatttgtcta acatgatgga actttgtgaa attaaggtta tttttgatgt
    20761 gcggattata acgcaaaaag gccgtctgaa tcatttcaga cggcctttgg catacaggtt
    20821 ttaaaaatgg aacaatacca ggctgacggc aatcaccgcc atgcccattg tcaggccgta
    20881 aacggtttca tggccgtctg aatagcgttt ggcagccggc agcagctcgt ccaacgccaa
    20941 aaacaccatc acaccggcta tcacgccgaa taccgaacca aacacggcag gcgacaaaaa
    21001 cggctgcaaa accaaatagc ccaaagccgc ccccaacggc tcggccaagc cggatagcag
    21061 acacgcccac accgttttct tacggctgcg ggtggcaaaa taaaccggcg cggcgatgga
    21121 aatgccctcc ggaatattat ggatggcaat cgccaaggcc aaaggcatcc cgactgctgg
    21181 attttccaat gtggcaaaaa acgtcgccaa gccttcgggg aaattgtgcg cagtaatcgc
    21241 aaacgccgcc atcatgccga ctcgcgcgat atggcggcgt ttgctttctt gaaacgacgg
    21301 gtcttgcgcg tctaaagttt catgcgggtt cggcaccaga cggtcaatca gcgcaatgcc
    21361 gcccatcccg gccaaaaatg ccatggtcgc cgccgcaaac gcgtggtctt tatcataaat
    21421 ttcagcgaac gcctcgctgg acttactgaa aatctccgtc agggaaacat ataccatcgc
    21481 accgccggca aacgccaaac caaacgacaa cacacgcgga ttgggcgttt tggaaaacat
    21541 caccaagcca ctgcctaata cggtaaacaa accggcagcc aatgtgatgg aaaaggcaac
    21601 ggccaaattg gacatcgaaa aatcgggcat gagaaaacct gcgctaaaag ctgggacagg
    21661 ttcagactaa cactttttaa tgtatatgat aatagttatt atttatttta ttgattggat
    21721 acacggattt tgaaacaaaa ggccgtctga aaaatgattt tcagacggcc tttaaatttg
    21781 aaatgccgct aaaccttatc gctttccagc ttaagcctga taacgcgaca ggctcaaatc
    21841 gtcgctgcgg atttcggtgt ctttgccgct cacgatatcg gcggttaatt ttgccgaacc
    21901 cagcgacatg gtccagccta aagtaccgtg gccggtattc agaaacaggt tgtcaaagcg
    21961 ggtgcgaccg attaacggcg tgctgtcggg cgtcatcggc ctgaggccgc tccagaacga
    22021 tgcttggctc aaatcgccgc cttccgggaa caagtcgttg acgaccaaag ccaaggtttc
    22081 gcggcgtttt tcgggcagtt tgatttcgta gcccgacaat tccgccatac cgccgacgcg
    22141 gattctgttg tcaaagcgcg tgatggcgac tttgtagctt tcatctaaaa cggtggacac
    22201 cggtgcgccg tcggaatttg tgaccggcag ggtcaaggaa tagcctttga cgggataaat
    22261 gggcagattg agatccaact gcgccaaaac cgtcctgctg aaacaaccga gcgcgcagac
    22321 aacggcatct gcttcaaacc gccctgtttc ggtttcaacg gttttgatgc gcagcccgtt
    22381 gtggtcgatg cggctgatgg tttggttgaa atgaaaccgt acgccctttt cctgacacaa
    22441 tttgtatagg ttttcagtga agaggcggca gtcgccggtt gcatccgcag gcaggtgcag
    22501 gccgccggca attttggcgg taacgcgtgc cagcgcaggc tcgaattctg cgcattcttc
    22561 gggcttcaga cggcggtacg gcacgccgta gcgttccaaa acggcaatgt cttgttctgc
    22621 agcttcaact tctttagcct gacggaaaat ctgcaacgtc ccttttttgc gcccttcaaa
    22681 attcatgccg gtttgcgctt caaaacggcg gaacatttca cggctgtatt cggaaatcct
    22741 gaccatgcgc tctttattgg tttgatagtg cgctgccgtg cagttttgca gcatccgcca
    22801 cagccattcg atttgataca ggctgccgtc ggggcgaaac agcaaaggcg gatggctttt
    22861 aaacagccat ttcagtgctt tggtcggaat accgggtgca gcccaaggcg tggtatagcc
    22921 gtaagaaagc tggcctgcat tggcaaaact ggtttccatc gccacaccct tggcgcggtc
    22981 gatgaccgtt acttcatgtc cggcctctgc cagataccac gcggaagaca cgccggcaac
    23041 acccgcacct aaaacaagca ctttcatgtt tctccctccg actttttcaa aacagactta
    23101 atatgccgtg ccgtctgaat attcggattc agacggcctc ggatattaat gcggcaattc
    23161 gccgtttgtg attttttgtt tgaagtcgcg cgtttcattg acgatgactt tcgccatcaa
    23221 taaaagtgca atcaggttgg gcaatgccat caagccgttg aatgtgtccg aagccagcca
    23281 caccaaatca aggctcaaca cggtacccag cataacggaa gaaacataac ccacgcggta
    23341 caaaccggca aatttctcgc cgaaaacata caccgcgcat ttttcgccgt aatagcacca
    23401 gcccaaaatg gttgagtagg caaagaaaat caggccgatg gtaacaatcc agccgccgat
    23461 gccgggcagc attttttgga atgtgacggt tgtcagtgcc gcgccgctca cttcaggttt
    23521 gacaaactcg ccgcccgcgc cgagcagtcc cattaccaac acgatgccgg taatcgagca
    23581 aacgacgatg gtatccaaaa acgtaccggt catagaaacc aaggcctgac ggacgggatg
    23641 gtcggttttc gcggctgcgg cggcaatagg cgcagaaccc atacccgcct cattggagaa
    23701 cacgccgcgc gccacgccgt agcggatgac cgtaccgata gcgccgcccg ccactgcctg
    23761 cgcgctgaac gcatcggaga aaatcagctt gacggcaggc atcagtgcat cggaattaat
    23821 cgcgataatg gaaagaccgc ccaacacata aaacaccgcc atagcaggca cgatgaaaga
    23881 agcggctttg gcgatgcctt taataccacc taaaacgaca acggcagtca gaacggtcaa
    23941 cgtaatgccg gtataggcag gttcgatacc gaagctggtt tgcaccgcct gtgcaaccga
    24001 gttggactgc accgagctgc cgataccgaa ggaagcgaat gtgccgaaca gcgcaaacgc
    24061 gacggccatc catttccagt ttttgcccaa gcctttttcg atgtaataca tcgggccgcc
    24121 ggacatttcg cctttggaat tgttgacgcg gtatttcacc gccaacacgc cttcgccgta
    24181 tttggtggcc atgccgaaaa tggcggtcat ccacatccaa aataccgcgc ccgggccgcc
    24241 ggttaccacc gcagtcgcca cgccggcgat gttacccgta ccgatggtgg cggacagcgc
    24301 ggtcatcaac gccgcgaaat gggaaatatc gccttcgtgg ccttcgccgc cttcatactt
    24361 ctttgacggc acaaatgcct gtttcagcgc atagcccaac atagtgaact gcaagccttt
    24421 cagcataacg gtcagcacaa tgccggtgcc gaccagcagc atcaacataa cagatcccca
    24481 gacccagccg ctgacggttt cgaaaaaggc tttgagattg tctaaaaaca cttgcatggc
    24541 tttctccttt gtct
//
LOCUS       DBBZXU010000017        24390 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.017, whole genome shotgun sequence.
ACCESSION   DBBZXU010000017 DBBZXU010000000
VERSION     DBBZXU010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 24390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24390
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.017"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..266
                     /locus_tag="ACJJDE_000603"
     CDS             <1..266
                     /locus_tag="ACJJDE_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HGG7540579.1"
                     /translation="YCLRLRRLVLIFVNPLHMELETVVPPEEGEGEGEGGDGEIPEYL
                     ELHSEREDDISAPSQAEPPPRNIKPLVFGLLIAFLGYLLGKIF"
     gene            301..1812
                     /gene="ubiB"
                     /locus_tag="ACJJDE_000604"
     CDS             301..1812
                     /gene="ubiB"
                     /locus_tag="ACJJDE_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HGG7540580.1"
                     /translation="MKWLKRLTVIVGTFYRYRLAGLCASLMGSGWICALLKMMPQSSK
                     LKNEPPAVRLRLALESLGPIFIKFGQVLSTRPDLIPHDYAVELAKLQDKVPPFDARLS
                     REQIEKSLGQSIEKLYAEFETEPVASASIAQVHKARLHSGERVAVKVLRPNLLPLIEQ
                     DLSLMRFGAVWVERLFADGKRLKPLEVVAEFDKYLHDELDLMREAANAGQLGRNFQNS
                     NMLIVPKVFYDYCTSDVLTIEWMDGTPVADIAKLKADGIDLHKLADYGVEIFFTQVFR
                     DGFFHADMHPGNILVAADNRYIALDFGIVGTLTDYDKRYLAINFLAFFNRDYRRVATA
                     HIESGWVPADTRAEELEAAVRAVCEPVFNKPISQISFGLVLMRLFEVSRRFNVEIQPQ
                     LVLLQKTLLNIEGLGRQLDPDLDLWKTAKPFLVKWMNGQVGPKALWRNLKNEAPDWAQ
                     IIPSLPRKISALIDENRQQEMRDAYIHLVKVQQRQSLWLAVIAVVLLLILLLK"
     gene            complement(2169..2987)
                     /gene="cysE"
                     /locus_tag="ACJJDE_000605"
     CDS             complement(2169..2987)
                     /gene="cysE"
                     /locus_tag="ACJJDE_000605"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HGG7540581.1"
                     /translation="MKKDHLNTTGFDLWHTIREETAAAVSAEPMLASFLHQTVLRHES
                     LGSVLAYHLSSKLGSPIMDVRALFEIYQQALGSDTQIGKCVEADLKAIYERDPACDEY
                     SLPLLYFKGFHAIQAHRINHRLYLDGRKTLAYFLQNRMSEVFGVDIHPAARFGYGLML
                     DHATGFVAGETAVLGNNISILHGVTLGGSGKEGGDRHPKIGDGVMIGANASILGNIRI
                     GSNAKIGAGSVVVSDVPPSITVVGVPAKPVARSLKTPSADMDQNIQFTEIDFMI"
     gene            3171..3749
                     /gene="grpE"
                     /locus_tag="ACJJDE_000606"
     CDS             3171..3749
                     /gene="grpE"
                     /locus_tag="ACJJDE_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HGG7540582.1"
                     /translation="MSEQTQQQNSEEAVENVEAVETVETVGNADGVQEQAAAEPAYED
                     LQARIAELEAQLKDEQLRALANEQNLRRRHQQEIADTHKFAGQKFAVEMLPVKDYLEM
                     ALLDQSGNFDALKMGVQMTLNELQKAFDATQIKEINPKAGDKLDPNIHQAMQAVASEQ
                     EPNTVVGVMKKGYTLSDRVLRPAMVTVAQKEA"
     gene            complement(3873..4088)
                     /gene="nqrM"
                     /locus_tag="ACJJDE_000607"
     CDS             complement(3873..4088)
                     /gene="nqrM"
                     /locus_tag="ACJJDE_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Na+)-NQR maturation NqrM"
                     /protein_id="HGG7540583.1"
                     /translation="MKTLLLTFGIFLTVIIGMAVGYIFSKRSIKGSCGGITALGMKKM
                     CDCDTPCDTLQKKLDEEKQAGGIRVDR"
     gene            complement(4114..5169)
                     /locus_tag="ACJJDE_000608"
     CDS             complement(4114..5169)
                     /locus_tag="ACJJDE_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HGG7540584.1"
                     /translation="MPSETRLPNFIRALIFALGFIFLNACSEQTAQTVTLQGETMGTT
                     YTVKYLSNNRGKLPSPAEIQKRIDDALKEVNRQMSTYQPDSEISRFNQHTAGKPLRIS
                     SDFAYVTAEAVRLNRLTHGALDVTVGPLVNLWGFGPDKSVTREPSPEQIKQAASYTGI
                     DKIILKQGKDYASLSKTHPKAYLDLSSIAKGFGVDKVAGELEKYGIQNYLVEIGGELH
                     GKGKNARGEPWRIGIEQPNIVQGGNTQIIVPLNNRSLATSGDYRIFHVDKNGKRLSHI
                     INPNNKRPISHNLASISVVADSAMTADGLSTGLFVLGETEALKLAEREKLAVFLIVRD
                     KGGYRTAMSSEFEKLLR"
     gene            complement(5321..6538)
                     /gene="nqrF"
                     /locus_tag="ACJJDE_000609"
     CDS             complement(5321..6538)
                     /gene="nqrF"
                     /locus_tag="ACJJDE_000609"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit F"
                     /protein_id="HGG7540585.1"
                     /translation="MEIILGIVMFTVIVLVLALMILFAKSKLVSEGDITIKVNGEKEL
                     TMPAGGKLLGALANEGIFIPSACGGGGSCGQCRVVVKSGGGDILPTELSHISKREARE
                     GCRLSCQVNVKTDMDIEVPEEVFGVKKWECTVISNDNKATFIKELKLAIPEGEEVPFR
                     AGGYIQIEAPSHTVAYKDFDIPKEYHEDWDKYNLWQYVSKVDEPILRAYSMASYPEEK
                     GIIMLNVRIATPPPRVPDAPPGQMSSYIWSLKPGDKVTISGPFGEFFAKDTDAEMVFI
                     GGGAGMAPMRSHIFDQLKRLNSKRKITFWYGARSKREMFYVEDFDQLAAEFPNFTWHV
                     ALSDPLPEDNWDGYTGFIHNVVYENHLKNHEAPEDCEFYMCGPPIMNQSVIKMLKDLG
                     VEDENILLDDFGG"
     gene            complement(6552..7145)
                     /gene="nqrE"
                     /locus_tag="ACJJDE_000610"
     CDS             complement(6552..7145)
                     /gene="nqrE"
                     /locus_tag="ACJJDE_000610"
                     /EC_number="7.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit E"
                     /protein_id="HGG7540586.1"
                     /translation="MEHYLSLFIKSVFIENMALSFFLGMCTFLAVSKKVSTAFGLGVA
                     VIFVLGLSVPVNQLVYSLLKDGAIVEGVDLTFLKFITFIGVIAALVQILEMFLDKFVP
                     ALYNALGIYLPLITVNCAIFGAVSFMAQREYNFGESVVYGFGAGLGWMLAIVALAGIT
                     EKMKYSDAPKGLKGLGITFIAAGLMAMAFMSFSGIQL"
     gene            complement(7149..7775)
                     /locus_tag="ACJJDE_000611"
     CDS             complement(7149..7775)
                     /locus_tag="ACJJDE_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit D"
                     /protein_id="HGG7540587.1"
                     /translation="MADMKRLKHLMFSPFINNNPIALQVLGICSALAVTTKLQTAIVM
                     GISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLS
                     VFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGIMLLVVATVRELIGSGKL
                     LGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE"
     gene            complement(7775..8551)
                     /locus_tag="ACJJDE_000612"
     CDS             complement(7775..8551)
                     /locus_tag="ACJJDE_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit C"
                     /protein_id="HGG7540588.1"
                     /translation="MAKKFDKDSFSGTLIVVLAVSLICSIIVAGAVVGLKPIQEKQKL
                     QDKQGYILSVAGLMDKNTDISKTFAERIEQRVVDLATGEYVADAPKDFSARVAGKDPA
                     QSIQIKPEDDLAGIKSRAKYTEVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPD
                     GNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGQGKLALHVGKGAGSDKEHG
                     VDALSGASLTSKGVQGSFAYWFGENGYIPYLNKLKSAGAQ"
     gene            complement(8544..9776)
                     /locus_tag="ACJJDE_000613"
     CDS             complement(8544..9776)
                     /locus_tag="ACJJDE_000613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:ubiquinone reductase (Na(+)-transporting)
                     subunit B"
                     /protein_id="HGG7540589.1"
                     /translation="MGLKHFLEKIEPHFLPGGKHEKWYALYEAAATIFYTSGAVTRKA
                     AHVRDALDSKRMMILVWLALFPAMFYGMYNVGAQAFGALTPDLLQQSIANDWHYALAN
                     ALGINMSSEAGVLGKMLFGAIYFLPIYATVFIVGGFWEVLFATVRKHEINEGFFVTSI
                     LFALIVPPTLPLWQAALGISFGVVVAKEVFGGTGKNFMNPALAGRAFLFFAYPANLSG
                     DAVWTAVDGYSGATALAQWAAHGADGLKNAVTGQTITWMDAFIGKLPGSIGEVSTLAL
                     LIGGAFIVFARIASWRIIAGVMIGMIAMSSLFNFIGSDTNAMFAMPWYWHLVVGGFAI
                     GMLFMATDPVSASFTNVGKWWYGALIGVMCVLIRVVNPAYPEGMMLAILFANLFAPIF
                     DYFVAQANIKRRKARSNG"
     gene            complement(9779..11122)
                     /locus_tag="ACJJDE_000614"
     CDS             complement(9779..11122)
                     /locus_tag="ACJJDE_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)-translocating NADH-quinone reductase
                     subunit A"
                     /protein_id="HGG7540590.1"
                     /translation="MIKIKKGLNLPIAGRPEQVIYDGPVITEVALLGEEYAGMRPSMK
                     VKEGDAVKKGQVLFEDKKNPGVVFTAPVSGKIAAIHRGEKRVLQSVVIAVEGNDEIEF
                     ERYAPEALANLSGEEVRRNLIQSGLWTALRTRPFSKIPAVDAEPFAIFVNAMDTNPLA
                     ADPVVVIKEAAEDFRRGLLVLSRLTERKIHVCKAAGADVPSENAANIETHEFGGPHPA
                     GLSGTHIHFIEPVGANKTVWTINYQDVIAIGRLFATGRLNTERVIALGGSQVNKPRLL
                     RTVLGAKVSQITAGELVDADNRVISGSVLNGAITQGAHDYLGRYHNQISVIEEGRSKE
                     LFGWVAPQPDKYSITRTTLGHFLKNKLFKFTTAVNGGDRAMVPIGTYERVMPLDILPT
                     LLLRDLIVGDTDSAQALGCLELDEEDLALCSFVCPGKYEYGPLLRKVLETIEKEG"
     gene            complement(11471..12892)
                     /locus_tag="ACJJDE_000615"
     CDS             complement(11471..12892)
                     /locus_tag="ACJJDE_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HGG7540591.1"
                     /translation="MRHLPLFSLMLFPASVYAADLDGANLNLLWSLPFALILLSIALG
                     PLFFSHTWHHHYGKITAFWTLLFLIPFSLVFGASAGIHTVAHALVEEYIPFILLLLAL
                     YTISGGILVWGDLNGTPKLNTALLAVGTALASIMGTTGAAMLMIRPLLKANQNRTRRV
                     HIVIFFIFLVANIGGGLTPLGDPPLFLGFLKGVDFMWTVKHMFAPVLISTAVLLTAFY
                     FIDNRFFKQESIAQDTPAQQEKPEKIAIFGKWNFLLLSGVVGAVLMSGLWKPEHPGFE
                     ILGSRYALQNLVRDVILIALTAVSMAITPKQVRAGNEFNFEPIAEVGKLFLGIFITIF
                     PVLSILKAGEAGALGGVVSLVHDTAGHPINVMYFWMSGILSAFLDNAPTYLVFFNMAG
                     GDAQALMTGTLFHSLLAVSMGSVFMGALTYIGNAPNFMVKAIAEQRGVPMPTFFGYMM
                     WSVAFLTPVFIVHTLIFFVFKLL"
     gene            complement(13250..13609)
                     /locus_tag="ACJJDE_000616"
     CDS             complement(13250..13609)
                     /locus_tag="ACJJDE_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaN family protein"
                     /protein_id="HGG7540592.1"
                     /translation="MIRYLLIACGCISLLLGIIGIFLPLLPTTPFVLLSAACWAKASP
                     RFHRWLHRHRYFGPMVHNWEQNGAVPRKAKIFAISMMTASCLIMFWQFPQRWWVGAVS
                     SVFCSLVAIWMWRRPES"
     gene            complement(13606..14211)
                     /locus_tag="ACJJDE_000617"
     CDS             complement(13606..14211)
                     /locus_tag="ACJJDE_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1415 domain-containing protein"
                     /protein_id="HGG7540593.1"
                     /translation="MTIMNINTSENKDAVAEHTGQWLEKAVIGLNLCPFAKAPHVKNL
                     VRIAISEAKHLDSFLEDLDEELQRLGNTPATELETTLLVHPTLFPDFDVFNDMLDIAD
                     AAVIENGLEGIVQIAPFHPQFRFQNTEPDDIGNYTNRSPYPTLHLIREDSIAKAAQAF
                     PDTSAIFERNIALLEKMGHEGWAKLGITSCPYPHNKKNISK"
     gene            complement(14258..14740)
                     /locus_tag="ACJJDE_000618"
     CDS             complement(14258..14740)
                     /locus_tag="ACJJDE_000618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HGG7540594.1"
                     /translation="MPQLTLDKTDIKILQVLQENGRLTNVELSERVALSPSPCLRRLK
                     QLEDAGIVRQYAALLSPESVNLGLQAFIRVSIRKAKDAREDFAASVRKWPEVLSCFAL
                     TGETDYLLQAFFTDMNAFSHFVLDTLLSHHGVQDAQSSFVLKEIKHTTSLPLNHLLKE
                     "
     regulatory      14944..15041
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            15251..16351
                     /gene="gcvT"
                     /locus_tag="ACJJDE_000619"
     CDS             15251..16351
                     /gene="gcvT"
                     /locus_tag="ACJJDE_000619"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HGG7540595.1"
                     /translation="MITLKTTPFHQAHQDAGAKPVDFAGWELPIHYGSQIAEHEAVRT
                     DAGMFDVSHMLVTDVAGANAKAFFRKLIANDVAKLAFVGKALYSALLNDNGGVIDDLI
                     VYRTNEAETQYRIVSNGATREKDTAQFHKVGQEFGVAFNPRYDLGMLAVQGPKAIEKL
                     LTVKPEWADVIHGLKPFQGADLGNDWFVARTGYTGEDGVEVILPGTEAVAFFKALQAA
                     GVQPCGLGARDTLRMEAGMNLYGNDMDDDTSPLEAGMGWTVDLKDESRDFVGKAALLA
                     LKEKGVAVKQVGLLLGKGGILRAHMEVLTDKGKGETTSGVFSPSLKQSIAIARVPKDF
                     DGDTAKVLMRGKEVDVRVLKLPFVRNGQKQFD"
     gene            16513..16899
                     /gene="gcvH"
                     /locus_tag="ACJJDE_000620"
     CDS             16513..16899
                     /gene="gcvH"
                     /locus_tag="ACJJDE_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005960 - glycine cleavage complex
                     [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HGG7540596.1"
                     /translation="MSNNIPAELKYVASHEWLRLEEDGTITVGITHHAQELLGDIVFV
                     ELPEVGANLAAEEQAGVVESVKAASDVYAPIAGEVVAVNEDLPSAPETANSDSYGAGW
                     FFKIKPVNPADYDGLLTAEQYAGEVD"
     gene            17051..18298
                     /gene="hemA"
                     /locus_tag="ACJJDE_000621"
     CDS             17051..18298
                     /gene="hemA"
                     /locus_tag="ACJJDE_000621"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HGG7540597.1"
                     /translation="MQLTAVGLNHQTAPLSIREKLAFAAACLPEAVRNLARSKAATEA
                     VILSTCNRTELYCVGDSEEIIRWLADYHSLPIEEISPYLYTLGMQETVRHAFRVACGL
                     DSMVLGEPQILGQIKDAVRVAQEQESMGKKLNALFQKTFSVAKEVRTDTAVGENSVSM
                     ASASVKLAEQIFPDIGDLNVLFIGAGEMIELVATYFAAKSPRLMTVANRTLARAQELC
                     DKLGVNAEPCLLSDLPAILHDYDVVVSSTASQLPIVGKGMVERALKQRQSMPLFMLDL
                     AVPRDIEAEVGDLNDAYLYTVDDMVNIVQSGKEARQKAAAAAETLVSEKVAEFVRQQQ
                     GRQSVPLIKALRDEGEKARKQVLENAMKQLAKGATAEEVLERLSVQLTNKLLHSPTQT
                     LNKAGEEDKDLVHAVAQIYHLDK"
     gene            18625..19146
                     /locus_tag="ACJJDE_000622"
     CDS             18625..19146
                     /locus_tag="ACJJDE_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NosR"
                     /protein_id="HGG7540598.1"
                     /translation="MSCFSIKRMSAFRARITAFFAAFVFLTAALPAYAERLPDFLAKI
                     QPSEIFPGADRYGKPEGKPMVARVYKGDEQLGLVYITTDAVNTRGYSSKPIDTLMALA
                     KDGTIAGAKLVDHHESIMLIGIPHLPAPGRAIRSNWLPAYIKPNFISTNRLRLKGLPT
                     VLQPSKGTGAGVP"
     gene            19035..20234
                     /locus_tag="ACJJDE_000623"
     CDS             19035..20234
                     /locus_tag="ACJJDE_000623"
                     /inference="COORDINATES: protein motif:HMM:TIGR04247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase family maturation
                     protein NosD"
                     /protein_id="HGG7540599.1"
                     /translation="MASGVYQTKLYIDKPITIEGPADRSATIEGDRSGRTIAVHAPDV
                     TLRNLTVTRSGMSLPAMDAGIYLEETAPHALIEHNNILDNSVGVYLHGSSEAMVRENK
                     IVGDATLRVNERGNGVTVWNAPGAQVVGNDISKGRDGIFSNTSTYNTYKNNRFSDLRF
                     AVHYMYTNDSEISGNISVGNNMGYVLMFSERLKVFDNIAVGSRDQGIMLNYVNYSDIH
                     DNIINKAGKCVFAYNANYDKLFANHFENCQIGIHFTAAIEGTSLHDNSFINNESQVKY
                     VSTRFLDWSEGGHGNYWSDNSAFDLNGDGFGDSAYRPNGIIDQIIWRAPVSRLLMNSP
                     AISIVKWAQAQFPAVLPGGVVDSKPLMKPYAPKIQTRYQAMKDELLKEAETRQSEWGR
                     AENGSLN"
     gene            20292..20906
                     /locus_tag="ACJJDE_000624"
                     /pseudo
     CDS             20292..20906
                     /locus_tag="ACJJDE_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709597.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            20923..21054
                     /locus_tag="ACJJDE_000625"
                     /pseudo
     CDS             20923..21054
                     /locus_tag="ACJJDE_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688339.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            21051..21545
                     /locus_tag="ACJJDE_000626"
     CDS             21051..21545
                     /locus_tag="ACJJDE_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide reductase accessory protein NosL"
                     /protein_id="HGG7540600.1"
                     /translation="MKKTLLAIVAVSALSACRQAEEGSPPLPRQISDRSVGHYCSMNL
                     TEHNGPKAQIFLNGKPDQPVWFSTIKQMFGYTKLPEEPKGIRVIYVTDMGNVTDWTNP
                     NADTEWMDAKKAFYVIDSGFIGGMGAEDALPFGNKEQAEKFAKDKGGKVVGFDDMPDT
                     YIFK"
     gene            complement(21633..23294)
                     /locus_tag="ACJJDE_000627"
     CDS             complement(21633..23294)
                     /locus_tag="ACJJDE_000627"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HGG7540601.1"
                     /translation="MTESITRDSMQYDVVIVGAGPSGLSAAIKLKQLAEQNGREISVC
                     VVEKGSEAGAHSLAGAVIDPIALNELIPDWKEKGAPLTRTVTQDKVLFLTEKKAFNLP
                     ITPNFDNHGNYIVSLGEVVRWLAEQAENLGVEIYPGFAAAEVLYHEDGSVKGIATGNM
                     GIGKDGEPTDSFQPGMELWAQQTLFAEGCRGSLSKQVIERFQLDQNSQPQTYGLGIKE
                     IWEVPSEKHQPGLVVHSAGWPLDSKTYGGAFVYHFDDNKVAVGFVVGLDYQNPYLSPF
                     EEFQRFKTHPEIRKTFEGGRRIAYGARSLIEGGLQSLPKLSFKGGVLIGDAAGFLNMP
                     RIKGIHTAMKSAMLAAEAVFPLLENLEEVENFDSGKEAADYQQRFEQSWLYQELYAAR
                     NVRPSFKWGVYLGSIYTGIDQMIFRGKAPWTLKHHGKDNEQLKKAAACKPIDYPKPDG
                     VLTFDRLSSVFLANLAHEENQPDHLVLNNPQTMIDVNYKEYASPETRYCPAGVYEIVE
                     ENGNPRLQINAANCVHCKTCDIKDPTQNITWICPEGASGPNYGGM"
     gene            complement(23424..23972)
                     /locus_tag="ACJJDE_000628"
     CDS             complement(23424..23972)
                     /locus_tag="ACJJDE_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HGG7540602.1"
                     /translation="MKVQSWKERRDFNIVKQDLDFSCGAASVVTLLNNFYGQKLTEED
                     VLKKLDKEQMPASFEDMRRIMPDLGFEAKGYALSFEQLAQLQIPVIVYLKYRKDDHFS
                     VLRGIDGNTVLLADPSLGHVSMSRAQFLDAWQTREGNLAGKILAVVPKGRDAGGDKAF
                     FTRSPKRQTEFAVGQVKWWRAY"
     gene            complement(23917..24107)
                     /locus_tag="ACJJDE_000629"
                     /pseudo
     CDS             complement(23917..24107)
                     /locus_tag="ACJJDE_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus and C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5842 a         6127 c         6624 g         5797 t
ORIGIN      
        1 tgtactgtct gcggcttcgt cgtcttgtcc tgatttttgt taatccacta catatggagt
       61 tagaaacggt cgtgccgccg gaggaagggg agggcgaagg agaaggcggg gatggggaaa
      121 tacccgaata tcttgaactt catagcgaac gggaagatga tatttccgca ccttcgcaag
      181 ccgaaccgcc gccccgcaat atcaaaccgc tggttttcgg gctgctgata gcctttttgg
      241 gctatctgct cggtaagatt ttttgattgt ccgataaatg ctgtattcgg gattttatat
      301 atgaaatggt tgaaacgcct gacggttatt gtcgggactt tttaccgcta tcggctggca
      361 ggtctgtgcg cttcgctgat gggtagcggt tggatatgcg ctctgctgaa aatgatgccg
      421 cagtcgtcca aattgaaaaa cgaaccgcct gccgtccgtc tgcgccttgc cttggaaagc
      481 ctggggccga ttttcatcaa gttcgggcag gttttgtcca cacgccctga tttgattccg
      541 cacgattacg ccgtcgaact ggcaaagctg caagacaaag tgccgccttt tgacgcgcgg
      601 ctttcgcgtg aacaaatcga aaaatcgttg ggtcagtcca tcgaaaagct gtatgcggaa
      661 tttgaaaccg agcccgtcgc cagcgcgtcc atcgcccaag tacacaaagc ccgcctgcat
      721 tcgggcgaac gagtggctgt caaagttttg cgccccaacc ttttgcccct tatcgaacag
      781 gatttgtcgc tgatgcgttt cggcgcggtt tgggtggagc gtctgtttgc cgacggcaag
      841 cgtctgaagc cgctcgaagt ggtggcggag ttcgacaaat acctgcacga cgagttggat
      901 ttgatgcgcg aagccgccaa tgccggacag ctcgggcgca atttccaaaa cagcaatatg
      961 ctgattgtgc ccaaggtgtt ttacgactac tgcaccagcg acgtgctgac aatcgaatgg
     1021 atggacggca cgccggttgc cgacatcgcc aaactcaaag cagacggcat cgatttgcac
     1081 aaactcgccg attacggcgt ggaaatcttt ttcacgcagg tcttccgcga cggctttttc
     1141 cacgcggata tgcaccccgg caatattttg gttgccgccg acaaccgcta catcgccctc
     1201 gatttcggca tcgtcggcac gctgaccgat tacgacaaac gttatctcgc catcaatttc
     1261 ctcgcctttt tcaaccgcga ttaccggcgc gtcgccaccg cccacatcga atcgggctgg
     1321 gtgcctgccg acacgcgtgc ggaagaattg gaagccgccg tccgcgccgt gtgcgaaccg
     1381 gtgttcaaca aaccgatttc gcagatttcc ttcggcttgg tgctgatgcg cctgtttgaa
     1441 gtcagccgcc gcttcaatgt cgaaatccaa ccgcagcttg tgctgctgca aaaaacgctg
     1501 ctcaacatcg aaggcttggg ccgccagctc gatcccgatt tggacttgtg gaaaaccgcc
     1561 aaaccgtttt tggtgaaatg gatgaacggg caggtcggcc ctaaagccct ttggcgcaac
     1621 ctcaaaaacg aagcccccga ctgggcgcaa atcatccctt cattgccgcg caaaatcagt
     1681 gcgttgattg atgaaaaccg ccagcaggaa atgcgtgatg cctatatcca tttggtcaaa
     1741 gtgcagcagc ggcaaagcct gtggctggct gtgattgcgg ttgttttgct gctgattttg
     1801 cttttgaaat aggctttgtc cgaatcatcg cccgactccg cccgtttata aggaaatcgg
     1861 ttatagtgga ttaacaaaaa ccagtacggc gttgcctcgc cttagctcaa agagaacgat
     1921 tctctaaggt gctgaagcac caagtgaatc gattccgtac tatccgtact gtctgcggct
     1981 tcgtcgcctt gtcctgattt ttgttaatcc actatatttc cggttgcgtg ggaatcgggt
     2041 gtattgaata aaaggcattt tgtccgactg gcaagtgccg acatcggcgg catatcaagg
     2101 cgcaggcttg aagcgggcaa tgtcgtctga agcccgtttg gcgtttcaga cggcattggt
     2161 gcggatattc aaatcataaa gtcgatttcg gtaaactgga tattttgatc catatccgcc
     2221 gacggtgttt tgagcgatcg cgccacgggt ttggcgggta cgccgacaac cgtgatggac
     2281 ggcggcacgt ctgaaaccac gacgctgccc gccccgattt tggcattgct gccgatgcgg
     2341 atattgccca atatcgaggc gtttgcgccg atcatcacgc cgtcgccgat tttagggtgg
     2401 cggtcgccgc cttctttgcc cgaaccgccg agcgttacgc cgtgcaaaat cgaaatattg
     2461 ttgcccaaca cggcggtttc gccggcaaca aagccggtgg cgtggtcgag catcagcccg
     2521 tatccgaaac gggcggcggg atggatgtcc acgccgaata cttcggacat acggttttgc
     2581 aggaaatacg ccagcgtttt gcgcccgtcg agatacagcc gatggttgat gcggtgtgcc
     2641 tgaatcgcgt ggaagccttt gaaatataaa agcggcagcg aatattcgtc gcaggcggga
     2701 tcgcgttcgt agatggcttt taagtctgct tcgacgcatt tgccgatttg ggtgtcgctg
     2761 cccaacgcct gctggtagat ttcaaacagc gcgcgcacgt ccataatcgg gctgccgagt
     2821 ttgctggaaa ggtggtaggc aaggacggag ccgagggact cgtggcgcaa cacggtttgg
     2881 tgcaaaaaac ttgccagcat cggttcggcg gagaccgcgg ccgcggtttc ttcgcggatg
     2941 gtgtgccaga ggtcgaaacc ggttgtgttt aaatggtctt ttttcatgag tgatgacgtt
     3001 tgaaaatcga tatggtcggc agtatcttac cgtctatatt attttttcgg taggggattt
     3061 gaaaatgaat ttgaaattct ctgcttttgc ttgaagtttc ttgaaaatgt ccttatcttg
     3121 cgcgggtaat aactggattt tgatttccaa tttgttttaa gggatacgat atgagcgaac
     3181 agacacagca gcaaaacagt gaagaagcgg ttgaaaatgt ggaggcggtg gaaaccgtcg
     3241 agacagtagg aaatgcggac ggtgtgcagg aacaggctgc cgcagagccg gcttatgagg
     3301 atttgcaggc gcggattgcc gagctggaag cgcagttgaa agacgagcag ctgcgcgctt
     3361 tggcaaacga gcaaaacctg cgccgccgcc accagcagga aattgcggat acgcacaagt
     3421 tcgccggaca gaagtttgcc gtggaaatgc tgccggtcaa ggattatctg gaaatggcgc
     3481 ttttggatca gagcggcaat ttcgatgcgc tgaaaatggg cgtgcagatg actttgaacg
     3541 agttgcagaa agcatttgat gctacgcaaa tcaaggaaat caaccctaaa gcgggcgata
     3601 agctcgatcc gaatatccat caggcgatgc aggcggtggc aagcgaacag gagccgaata
     3661 ccgtggtggg tgtgatgaag aagggttata cgctgtccga ccgcgtgttg cgcccggcta
     3721 tggttacggt ggcacagaag gaagcctgaa ggcgtctggg gaataatctg atttatttcc
     3781 tgaagcgcgt tttgcgtata aaccgatcga agtaaagcgg caatgccgtc tgaacccgcc
     3841 tgtcgggctt cagacggcat tttgtttcgg cgttaacggt caacccgtat gccgcctgcc
     3901 tgtttttctt catccagttt cttttgcagg gtgtcgcaag gtgtgtcgca gtcgcacatt
     3961 tttttcatac ccaaggcagt aatgccgccg caactgcctt tgatgctgcg tttggagaaa
     4021 atatagccga ccgccatacc gatgatgacg gtcaggaaga tgccgaaggt aaggagcagg
     4081 gttttcatgg tgtttcctaa tcggtttgta tgtttagcgg agcagttttt caaattcgga
     4141 agacatggcg gtgcggtagc cgcctttatc cctgacaatc aggaaaacag cgagtttttc
     4201 gcgctctgcc agctttaagg cttcggtttc gcccaatacg aataatcctg tggacaagcc
     4261 gtccgccgtc atcgcactgt ctgcgaccac gctgatggag gcgaggttgt ggctgatggg
     4321 tcgtttgttg ttcgggttga tgatatggga gaggcgtttg ccgtttttat cgacgtggaa
     4381 aatacggtaa tcgccggaag tggcaagcga acggttgttc agcgggacga taatctgcgt
     4441 attgccgcct tggacgatat tgggctgctc gataccgatg cgccacggtt cgccgcgcgc
     4501 gtttttgcct ttgccgtgca actcgccgcc gatttcgacc agataatttt gaatgccgta
     4561 tttttccagt tcgcccgcaa ctttatcaac gccgaagcct ttggcaatcg aagataaatc
     4621 caaataggcc ttggggtggg ttttgctcaa ggaagcgtaa tctttgcctt gtttcaaaat
     4681 gattttgtct atgcccgtat aagatgccgc ctgtttgatt tgttccggcg acggttcacg
     4741 ggtaacggat ttgtcggggc cgaatcccca aaggttgacc aaggggccga cggttacgtc
     4801 cagtgcgccg tgcgtcaggc ggttcaggcg gacggcttcg gcggtaacgt atgcgaagtc
     4861 acttgaaatg cggaggggtt tgccggctgt gtgttggttg aaccggctga tttcagagtc
     4921 gggctgatag gtggacatct gccggttgac ttctttaagc gcgtcatcga tgcgcttttg
     4981 tatttcggca ggggagggga gtttgccccg attatttgaa aggtatttga cggtataggt
     5041 cgtgcccatc gtttcgcctt gcagggtaac ggtttgcgcg gtttgttccg aacaggcgtt
     5101 taggaagata aaacccaggg caaatatcaa ggcgcggata aagttcggca ggcgtgtttc
     5161 agacggcata gtgtttgata gtcttggcaa atggcttgaa ttatatcgca aaacggccgg
     5221 tatgttttta tgttgatgcc gtctgaaagg tgttcggacg gtatcggata aaaaaaggaa
     5281 gaaaccgagg tttcttcctt ttgtgtttga agccgaatat ttaaccgccg aaatcgtcca
     5341 agaggatgtt ttcgtcttcc acacccaagt ctttgagcat tttgatgacg gactggttca
     5401 taatcggcgg gccgcacata taaaattcgc agtcttccgg cgcttcgtgg tttttcagat
     5461 ggttttcgta aaccacgttg tgaatgaagc ctgtgtagcc gtcccagttg tcttccggca
     5521 gtggatcgga cagggcgacg tgccacgtga agttcgggaa ttctgctgcg agttggtcaa
     5581 agtcttcgac atagaacatc tcgcgtttgg aacgtgcgcc ataccagaag gtaattttgc
     5641 gtttggagtt caaacgtttc aactggtcga aaatgtggga acgcatcgga gccatacccg
     5701 caccaccgcc gataaatacc atttcggcat cggtgtcttt ggcgaaaaat tcgccgaacg
     5761 ggccggaaat cgtaactttg tcgccgggtt tgagcgacca gatgtaggaa gacatttgtc
     5821 ccggaggcgc atcgggtacg cgcgggggcg gcgtggcgat acgcacgttc agcataatga
     5881 tgcctttttc ttcaggatac gaagccatag agtaggcgcg caaaatcggc tcatccactt
     5941 tggaaacgta ttgccacaga ttgtatttgt cccagtcttc gtggtattcc ttaggaatgt
     6001 cgaagtcttt gtaggcaaca gtgtgagaag gggcttcaat ttgaatgtag ccgccggcgc
     6061 ggaaaggaac ttcttcgcct tcaggaatgg caagcttgag ttctttaatg aacgtggctt
     6121 tgttgtcgtt ggagatgacg gtgcattccc attttttcac gccgaacact tcttcgggga
     6181 cttcgatgtc catgtcggtt ttgacgttga cctgacaaga cagacggcag ccttcgcgtg
     6241 cttcgcgttt gctgatgtgg gacagctcgg tcggcaggat gtcgccgccg ccgcttttta
     6301 cgacgacgcg gcattgtccg cacgaaccgc ccccgccgca ggcggagggg ataaagatgc
     6361 cttcgttggc aagcgcgccc aagagtttgc cgccggcggg catcgtcagc tctttttcgc
     6421 cgttgacttt gatggtgatg tcgccttcgc tgaccagttt ggatttggca aacagaatca
     6481 tcagtgccaa aaccaaaacg atgacggtaa acatcacgat acctaaaata atctccatac
     6541 cgatcccttt cttataactg gatgccggag aacgacataa acgccatcgc catcaggccg
     6601 gcggcgataa aggtaatgcc caagcctttg aggcctttgg gagcgtccga atatttcatt
     6661 ttttcggtaa tgcccgccaa agcgacaatc gccaacatcc agcccaagcc cgcgccgaag
     6721 ccgtatacaa cggattcgcc gaagttgtat tcgcgttgcg ccataaacga tacggcgccg
     6781 aaaatcgcgc agttcacggt aatcagcggc aggtagatgc ccaatgcgtt atagagggcg
     6841 gggacgaatt tatccaagaa catttccaaa atctgcacca aagcggcaat cacgccgatg
     6901 aaggtgatga atttcaaaaa ggtcaaatcc acgccttcga caatcgcgcc gtctttgagc
     6961 agcgagtaaa cgagttggtt gacagggacg gacagcccga gtacgaaaat taccgccaca
     7021 cccaaaccga atgcggtgga tacttttttg gataccgcca aaaacgtgca catacccaaa
     7081 aagaaggata gtgccatatt ttcaatgaag acggatttga tgaagaggct caaatagtgt
     7141 tccatagctt attcctccgc ctgttcgggt ttccaggtac gcagtcccca aatcaaaaag
     7201 ccgatgatga agaacgcgct gggggcgagc aggaacaagc cgttggtctg ataccagccg
     7261 ccgtcctgca cggtttggaa aacggtgtag cccaagagtt tgcccgagcc aatcagttcg
     7321 cggacggtgg cgacgacaag cagcattatc ccgtagcccg cgccgttgcc gatgccgtcg
     7381 atcaggcttt ccagcggcgg ctctttcatc gcaaatgctt cggcgcggcc catcacgata
     7441 cagttggtaa taatcagacc gacgaatacg gaaagctgtt tggacaattc gtaggcaaat
     7501 gcctgcaaga gttggtcgac cagcgtaacc agcgacgcga taatcgccat ttgcacgata
     7561 atacggatgc tgttggggat gtagttgcgt accagcgaaa tgaagaagct ggaaaaaccg
     7621 gttaccaaag ctacggaaat acccatcacg atggccgtct gaagtttggt ggtaaccgcc
     7681 aaagccgaac aaatacccaa aacctgcaag gcaatcgggt tgttgttgat aaagggtgaa
     7741 aacatcaaat gtttcaagcg tttcatatca gccattattg cgctcctgct gatttcaatt
     7801 tgttcaggta ggggatatag ccgttttcgc cgaaccagta ggcgaacgaa ccttgcacgc
     7861 ctttggatgt cagcgatgca ccggagaggg catctacgcc gtgttctttg tccgaacccg
     7921 cgcctttgcc gacgtgcagg gcgagtttgc cttgtccgtc aaacagtttt ttgccgacga
     7981 atttttgctg ccacaaagga ttgccgattt cgccgcccaa gcccggggtt tcgccttgct
     8041 cgtagtaggt aatgccgttg atggtgttgc cgtcgggttg gatggcgaca aagccgtaca
     8101 tgaccgacca caaaccgttg ccgtgcatcg gcaggatgat ttggccgatt ttgccgtctt
     8161 cgccttttac caaataaacc tcggtgtatt tggcacggct tttgatgcct gccaaatcgt
     8221 cttcaggttt gatttggatg ctttgggcag ggtctttgcc ggcaacgcgt gcgctgaagt
     8281 ctttaggcgc atcagcgaca tattcgccgg tcgccaaatc gacaacacgt tgctcgatac
     8341 gctcggcaaa ggttttgcta atgtcggtgt ttttatccat caaaccggct acgctcaaga
     8401 tatagccttg tttgtcttgg agtttttgtt tctcttggat gggtttcaaa ccgacgaccg
     8461 caccagcaac gatgatggaa caaatcaggc tgaccgccaa cacgacaatc agcgtgccgc
     8521 tgaagctgtc tttatcgaat ttcttagcca ttgctgcgcg cctttctgcg tttgatgttc
     8581 gcttgtgcga cgaaatagtc gaaaatcggg gcaaacaggt tggcaaacag aatcgccaac
     8641 atcatgcctt cggggtaagc cggattgacc acacggatca atacgcacat cacaccgatt
     8701 agcgcgccgt accaccattt gccgacattg gtaaaggaag cagaaacggg gtcggttgcc
     8761 ataaacagca taccgatggc gaagccgccg acgaccaaat gccagtacca aggcatagca
     8821 aacatagcgt tggtgtccga accgatgaag ttgaacagcg aagacatggc aatcataccg
     8881 atcatcacgc cggcaataat gcgccaagaa gcgatgcggg caaacacgat aaacgcgccg
     8941 ccgattaaga gtgccaaagt ggatacttcg ccgatggagc cgggcagttt gccgataaac
     9001 gcatccatcc aagtgatggt ttgaccggtt acggcgtttt tcaggccgtc tgcaccgtgt
     9061 gccgcccatt gcgccagcgc ggttgcgccg gaatagccgt caaccgccgt ccaaaccgca
     9121 tcgccgctca agttggcagg gtaggcgaag aacaggaagg cacggcctgc cagcgcaggg
     9181 ttcatgaagt ttttacctgt accgccgaat acttctttcg caaccaccac gccgaaagaa
     9241 atacccaaag ctgcctgcca cagcggcagc gtgggcggaa cgattaaggc aaacagaatc
     9301 gaggtaacaa agaaaccttc gttgatttca tgtttgcgca cggtggcgaa caaaacttcc
     9361 cagaaaccgc cgacaataaa tacggtcgcg taaatcggca ggaagtaaat cgcgccgaac
     9421 agcattttgc ccaacacgcc cgcttcagac gacatattga tgcccaaagc gttggcaagg
     9481 gcgtaatgcc agtcgttggc gatgctttgt tgcagcaaat cgggcgttaa cgcaccgaat
     9541 gcctgtgcgc cgacgttgta cataccgtag aacatggcag ggaacaaagc cagccacacc
     9601 aaaatcatca tgcgtttgga gtcgagcgca tcgcggacgt gtgccgcttt gcgcgttacc
     9661 gcaccggatg tatagaaaat cgtcgccgca gcttcgtaga gggcatacca tttttcatgt
     9721 ttgccgcccg gcaggaagtg cggttcgatt ttttccagaa aatgtttcaa gcccataatc
     9781 agccttcctt ctcaatggtt tccagcacct tacgcaacag cgggccgtat tcgtatttgc
     9841 ccgggcagac gaagctgcac aaagcgaggt cttcttcgtc caattccaag caacccaatg
     9901 cctgcgcgct gtcggtatcg ccgacgatta aatcgcgcaa aagcagggta ggcaggatgt
     9961 ccagcggcat tacgcgctcg taagtaccaa tcggcaccat ggcgcggtcg ccaccgttga
    10021 cggctgtcgt gaacttgaag agtttgtttt tcaggaaatg gccgagggtc gtacgcgtga
    10081 tggagtattt gtccggctgc ggcgcaaccc agccgaacag ctctttgctg cggccttctt
    10141 cgataacgga aatctgattg tggtagcgtc ccaaataatc gtgcgcgcct tgtgtaatcg
    10201 cgccgttcaa taccgaaccg gaaatcacgc ggttgtctgc gtcaaccaat tcgcccgcag
    10261 taatttgcga tactttcgca cccaaaacgg tacgcaagag gcgtggtttg ttgacttgag
    10321 aaccacccaa agcaatcacg cgctcggtgt tcagacggcc tgttgcaaac aaacgtccga
    10381 tggcaattac atcttgataa ttgatggtcc aaacggtttt gtttgcaccg accggctcaa
    10441 tgaaatgaat gtgcgtgcca ctcaaaccgg ccggatgcgg gccgccgaat tcatgtgttt
    10501 cgatgttggc agcattttca gacggcacgt ctgcgccagc tgccttacac acatggattt
    10561 tacgctcggt caaacggctc aataccagca aacctcgtct gaaatcctcg gcggcttctt
    10621 tgatcacaac cacagggtct gccgccagcg gattggtgtc catcgcattg acgaagatgg
    10681 cgaacggctc ggcatcgacg gcagggattt tgctgaacgg acgggtacgc agcgcagtcc
    10741 acaaaccgga ttgaatcaga ttgcggcgca cttcttcgcc gcttaagttt gccaacgctt
    10801 cgggcgcgta gcgttcgaac tcgatttcgt cgttgccttc aacggcaatc acaaccgact
    10861 gaagcacgcg cttttcgccg cgatggatgg cggcgatttt gcctgaaacc ggcgcggtaa
    10921 acaccacgcc cggattcttt ttgtcttcaa acagcacttg gccttttttg acggcatcgc
    10981 cttccttgac tttcatcgag gggcgcatac cggcatattc ttcgccaagc aacgcgactt
    11041 cggtaatgac gggcccgtca taaatgactt gctccggtct gcccgcgatg ggcaggttta
    11101 gacctttttt gattttaatc atatatttgc attacttgtg atggttaagg taaaaacggc
    11161 gtgttttgat accgtgtcgc gtggcatcaa aagcattgaa taaattaatg tagcaaagtg
    11221 ttagattcta tcaggaattg tacctgtttg tcagatttgc tgcttttttc cttgcggaag
    11281 ctgtttttat agtggattaa atttaaacca gtacggcgtt gcctcgcctt gccgtactat
    11341 ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg ttaatccact ataattgtcg
    11401 gaagggaaaa atattgattt gattatgccg gaatttaaaa tgccgtctga atgttcagac
    11461 ggcatagcgt ttacagcagt ttgaaaacga aaaagataag ggtatgtacg atgaagacgg
    11521 gtgtcaggaa ggcgaccgac cacatcatat agccgaagaa agtcggcatc ggtacgccgc
    11581 gctgttcggc aatggccttg accatgaagt tcggtgcgtt gccgatgtag gtcagtgcgc
    11641 ccatgaatac cgaacccata gaaaccgcca gcagcgaatg aaacagggta cccgtcatca
    11701 aggcttgggc atcgccgccc gccatattga aaaaaacgag ataagtgggc gcgttatcca
    11761 agaatgccga caatatgccg ctcatccaaa aatacatcac attaatcgga tgacctgccg
    11821 tatcgtgaac cagcgatacc accccgccca gcgcgcctgc ctcgcctgct ttcagaatgc
    11881 tcaggacggg aaagatggtg atgaagatgc cgaggaagag tttgcccact tcggcgatgg
    11941 gttcaaagtt gaattcgttg cctgcgcgga cttgtttggg cgtgattgcc atagatacgg
    12001 cggtcaatgc aatcaggatg acatcgcgga cgaggttttg cagggcgtaa cggctgccga
    12061 ggatttcaaa tcccgggtgt tcgggtttcc aaaggccgga cattagaacc gcgccgacca
    12121 cgcccgaaag caggaggaag ttccatttgc cgaagatggc gattttttcg ggtttttcct
    12181 gttgtgccgg cgtatcttgt gcaatgcttt cctgtttgaa gaaacggttg tcgatgaaat
    12241 agaaggcggt caacaggaca gcggtgctga tcaggacggg ggcgaacata tgtttgaccg
    12301 tccacatgaa atctacgcct ttgaggaagc cgaggaagag tggggggtcg cccaaagggg
    12361 tcagaccgcc gccgatgttt gcaaccagga aaatgaagaa gatgacgatg tgcacgcggc
    12421 gggtacggtt ttggttggct ttcagcagcg gacgaatcat cagcattgct gcgccggtcg
    12481 ttcccatgat agaggcaagt gccgtaccga cggcaagcag ggcggtgttg agcttgggtg
    12541 tgccgttcaa gtcgccccaa accaaaatgc cgcctgaaat ggtgtacagg gcaagcagca
    12601 gcaggatgaa ggggatgtat tcttcaacga gtgcgtgtgc gacggtatgg ataccggcgg
    12661 acgcgccaaa aaccaaactg aacgggatga ggaagagcaa tgtccaaaag gcggtgattt
    12721 tgccgtaatg gtgatgccag gtatgcgaaa aaaacaaggg acccaatgcg atagacagca
    12781 aaatcagggc aaagggcagg ctccacagca ggtttaggtt tgcgccgtcc aaatctgcgg
    12841 cgtaaaccga tgcggggaaa agcattagtg aaaacagggg taggtggcgc atcgtgtttc
    12901 ctcgattcaa gcactgcctt gcgcggcgcg tgggagtgat acaggcaccg tgccgcccgg
    12961 acataggcgg actgtgctgc ctgtttgttt ttgaaaaaag ttttccgatt gattgtaaag
    13021 taaataatca ggataaacca gtttcccaaa ccggaaggcg gcgggaaggc ggattgctgt
    13081 gcttgggaat atatgttctt tttgataaat aattttattt aaaacaaata aatatatgtc
    13141 tttaataaat aatctatcga aaacgaaaaa tgaatttatt ttaacatata tttgcaatga
    13201 aacaggtttg ccccccgttt gtttgccctt atccctttca gtacggcatt caagattcgg
    13261 gcctgcgcca catccatatg gcgacaaggg aacaaaaaac cgatgaaacc gccccgaccc
    13321 accagcgttg gggaaactgc caaaacatta tcaggcagga tgcggtcatc atactgatgg
    13381 cgaatatttt ggctttgcgc ggcactgcgc cgttttgttc ccagttatga accatcggac
    13441 cgaaatagcg gtgccggtgc agccagcggt gaaagcgcgg ggatgccttt gcccagcagg
    13501 cggcggagag cagtacgaac ggcgtggtcg gcaacagcgg caaaaaaatg ccgatgatac
    13561 ccaacagcag ggaaatgcag ccgcaggcaa ttaaaagata acgtatcatt ttgaaatatt
    13621 tttcttattg tgcggataag ggcaggatgt gataccgagt tttgcccagc cttcatgtcc
    13681 cattttttcc agcagggcga tattgcgttc gaatattgcc gaagtgtcgg gaaaggcttg
    13741 tgcggctttg gcaatgctgt cttcgcggat gaggtgcagc gtcggatagg gagaacggtt
    13801 ggtgtagttg ccgatgtcgt cgggttcggt attctgaaag cggaattggg gatggaacgg
    13861 tgcgatttgg acgatgcctt ccaagccgtt ttcgataacg gcggcatcgg caatatcgag
    13921 catatcgttg aatacgtcga aatcggggaa tagggtcggg tgaaccagca gggtggtttc
    13981 cagttcggtg gcgggtgtat tgcccagtcg ctgcagttct tcgtccaagt cttccaaaaa
    14041 actgtcaagg tgtttggctt cgctgattgc gatgcggaca aggtttttaa cgtggggggc
    14101 tttggcaaag ggacacaggt tcagaccgat gacggctttt tccaaccatt gtccggtgtg
    14161 ttcggcaaca gcatctttat tttcggaagt attgatattc attattgtca tgtaaatgtg
    14221 tttgcagatt gcacgtgcgg gaaaatcggg aagggcacta ttccttcagc aggtggttga
    14281 gcggcaggga ggtggtgtgt ttgatttctt ttaaaacaaa gctcgattgc gcatcttgta
    14341 cgccgtggtg ggacaggagc gtatccaaaa caaaatggga aaacgcgttc atatcggtaa
    14401 aaaacgcctg aagcaggtag tcggtttccc ctgtcagggc gaagcagctc aagacttcag
    14461 gccattttcg aaccgatgcg gcaaagtctt cccgcgcgtc ttttgctttg cggatggaaa
    14521 cgcggataaa tgcctgaagc cccaggttga cggattccgg agacagcagc gcggcatatt
    14581 ggcggacgat gccggcatct tccaactgct tcagacggcg caggcacgga gaaggcgaaa
    14641 gtgcgacacg ttcggacagt tcgacattgg tcagcctgcc gttttcctgg agaacctgta
    14701 agattttaat atcggttttg tctaaagtga gttggggcat atttgcgttc cgttttaagg
    14761 aattcggatt gtctgtccgt atgtttgcgg caatccgcac agatggagac catattaaca
    14821 tataaaaagt tataccgtca tccgggacaa attttgtttt cggaaaatca tgtgaaaaca
    14881 gaggcggtcg gtttgcatct cttttaagac ggcttgccca aaccgccgat tcaagacata
    14941 atcgggaaat gtgcaggaga gtgttacacc caactacaat gtaaccaccg aaggcgcaga
    15001 cacccttaaa tcgctcaggt atcagggact gcacattgaa acaaacaatc tggagagcgg
    15061 cgttggaata acgtccaccg aaggggagaa ggccgtctga accaccattc agacaaccgc
    15121 gcaaagcagt gagcagactg gtttgccatc atgcggatac ggccgaaaat ctcaggttca
    15181 aggacagata gggtcatccg cgcattttgt gcggacggca tctgaacaaa aaatccggag
    15241 aaacttgaga atgattactc tgaaaaccac cccatttcat caagcccatc aagatgcagg
    15301 cgcgaagccg gtagattttg ccggctggga gctgcccatc cattatggtt cgcaaatcgc
    15361 cgaacacgaa gccgtgcgca ccgacgccgg tatgtttgac gtatcccata tgcttgttac
    15421 cgacgtagca ggcgcaaatg ccaaagcctt tttccgcaaa ttgattgcca acgatgtcgc
    15481 caagctcgct tttgtcggca aagcccttta ttccgctttg ctcaacgaca acggcggcgt
    15541 gattgacgac ttaatcgttt accgcaccaa cgaagccgaa acccaatacc gcatcgtgtc
    15601 caacggagcg actcgcgaaa aagacacggc gcaattccac aaagtcggac aagagttcgg
    15661 cgttgccttt aatccgcgct acgacctcgg catgctcgcc gtacaaggcc ctaaagccat
    15721 cgaaaaactc ctgaccgtca aacctgaatg ggcggatgtg attcacggcc tcaaaccgtt
    15781 ccaaggtgca gacttgggca acgattggtt tgtcgcccgc accggctata ccggcgaaga
    15841 cggcgtcgaa gtgattctgc cgggcactga agccgtcgca ttcttcaaag ccctgcaagc
    15901 agcaggcgta caaccttgcg gtctcggcgc gcgcgacacc ctgcgcatgg aagccggcat
    15961 gaacctctac ggcaacgata tggacgacga taccagcccg ctcgaagcag gcatgggttg
    16021 gaccgttgat ttgaaagacg aaagccgcga ttttgtcggc aaagctgcct tgttggcatt
    16081 gaaagaaaaa ggcgttgccg tcaaacaggt cggtttgctg ctcggcaaag gcggcatcct
    16141 gcgcgcgcat atggaagtgt tgaccgacaa aggcaaaggc gaaaccacca gcggcgtatt
    16201 ctcgcccagc ctgaaacaat ccatcgccat cgcccgcgta ccgaaagact ttgacggcga
    16261 taccgctaaa gtgctgatgc gtggcaagga agtggacgtg cgcgtattga agttgccgtt
    16321 cgtgcgtaac ggtcaaaaac agtttgatta atatcggttc agacggcatt ttcatttcat
    16381 atgccgtctg aaagcaggtt ttaattgttg tccgatacgg acgtttgtag aaagcattga
    16441 acaaggcatc tgtggatatt gattcatgca gatgccgtct gaaaataacc cctatcaatg
    16501 gagtatcaaa ccatgagcaa caacatcccg gccgaactga aatacgttgc cagccatgaa
    16561 tggctgcgcc ttgaagaaga cggtacgatt accgtcggca ttacccacca cgcgcaagag
    16621 ctgttgggcg acatcgtgtt cgtcgagctg cccgaagtcg gcgcgaacct tgccgctgaa
    16681 gagcaagccg gtgtggttga gtctgtaaaa gccgcgtccg acgtgtacgc accgattgca
    16741 ggcgaagtcg ttgccgtcaa cgaagatttg ccaagtgctc cggaaactgc caacagcgat
    16801 tcttacggcg caggctggtt cttcaaaatc aaacctgtca atcctgccga ttacgacggt
    16861 ctgctgactg ccgaacaata cgcgggcgaa gtggattaaa ccgcccggct gcccgacggc
    16921 aaccgccgga caaacggaaa ctgcaccttc agacggcatt tttgcggtcg gaggtgcagt
    16981 tttttgtccg tgttttaagg aagcagttag gctataataa cggcctatat tcatctttac
    17041 cgattttttc atgcaactta ccgctgtcgg actcaatcat caaaccgcac ctttaagcat
    17101 acgggaaaag ctggcgtttg ccgcggcctg cctgcccgaa gccgtccgca atcttgcccg
    17161 aagcaaggcg gcaacggagg cggtaatcct ttctacctgc aaccgcaccg agctttactg
    17221 tgtaggcgat tcggaagaaa tcatccgttg gctcgcagac tatcacagcc ttcccataga
    17281 agaaatcagc ccctaccttt atactttggg gatgcaggag actgtgcgcc atgccttccg
    17341 cgttgcctgc ggcttggatt cgatggtgtt gggcgagccg cagattttag gacagattaa
    17401 ggatgcggtc agggttgctc aagagcagga aagtatgggt aagaaactca atgccctgtt
    17461 ccaaaaaacc ttttctgttg ctaaagaggt ccgtaccgat actgccgtcg gcgaaaactc
    17521 ggtttccatg gcttccgctt ccgtcaaatt ggcggaacag atttttcccg acatcggcga
    17581 tttgaatgtc ttgtttatcg gcgcaggcga aatgattgag ctggttgcca cttattttgc
    17641 cgccaaaagt ccccggctga tgacggttgc caaccggacg ctggcgcgtg cacaggagtt
    17701 gtgcgacaag ctcggtgtca acgccgaacc gtgcctgctg tccgatctgc ctgctattct
    17761 gcacgattac gacgtggtgg tttcttcaac ggcgagccag cttccgatag tcggcaaagg
    17821 catggtcgaa cgtgcattga aacagcgtca gagtatgccg ttgtttatgc ttgatttggc
    17881 cgtgccgcgc gatattgaag cggaagtcgg cgatttgaac gatgcctatc tttatacggt
    17941 ggacgatatg gtcaacatcg tccaaagcgg caaggaggca aggcagaagg ccgccgccgc
    18001 cgccgaaacg ctggtatccg agaaggttgc cgaatttgtc aggcagcagc agggcaggca
    18061 gagcgtcccc ttgattaaag ccttgcggga cgagggcgag aaagcgcgca agcaggtgtt
    18121 ggaaaatgcg atgaaacagc ttgccaaagg cgcaacggca gaagaggttt tggaacggct
    18181 gtccgtccaa ctgaccaaca agctgctgca ttcgccgacc caaactttga ataaggcggg
    18241 ggaagaagat aaagatttgg ttcatgccgt cgcgcagatt tatcatttgg acaaataacg
    18301 gtgcgccggg aaaaatgccg tctgaagagg tttcagacgg catttttttg tgccgcctga
    18361 caacatcgtg aaatcccaca ttatatcgat gtaatcacaa agtatagtgg attaacaaaa
    18421 atcaggacaa ggcgacgaag ccgcagacag tacagatagt acggcaaggc gaggcaacgc
    18481 tgtactggtt taaatttaat ccactatatt atcccgtatg cggattggtt ttaagatttg
    18541 taaatttaat ttgcatcaaa aaatcgccga tagatgattc atataatatc aatattaaag
    18601 agtatcggta tatcggggat agtcatgtcc tgtttttcaa tcaaacgtat gtccgcgttt
    18661 cgggcgcgga taacggcgtt ttttgccgcc tttgtctttt tgacggcggc actgcccgct
    18721 tatgcggagc gtctgcctga ttttctggcg aaaatacagc cttcggaaat ttttccgggt
    18781 gcggaccgtt acggcaagcc ggaaggtaag cctatggttg cccgcgttta caaaggcgat
    18841 gagcagttgg gcttggtcta tatcacgacc gatgcggtca atacgcgcgg ttattcgagc
    18901 aaaccgattg atacgctgat ggcgttggct aaagacggta cgatagccgg agcgaaattg
    18961 gttgatcacc atgagtcgat tatgctgatc ggtatcccgc atttgcccgc gcccgggcgg
    19021 gcgatacgct caaactggct tccggcgtat atcaaaccaa actttatatc gacaaaccga
    19081 ttacgattga agggcctgcc gaccgttctg caaccatcga aggggacagg agcgggcgta
    19141 ccatagccgt acacgcgccg gacgtaacgc tccgcaacct gaccgttacc cgttccggca
    19201 tgagcctgcc agcaatggat gccggtattt atctcgaaga aaccgctccg cacgccctga
    19261 ttgaacacaa taatattttg gataattcgg tcggcgtcta tctgcatggt tcttccgaag
    19321 cgatggtgcg cgagaacaaa atcgtcggcg acgcgacttt gcgcgtgaac gagcgcggca
    19381 acggcgttac cgtttggaac gcgcccggtg cgcaagtcgt cggcaacgac atttccaaag
    19441 ggcgggacgg cattttttcc aacaccagca catataacac ctacaaaaac aaccgcttca
    19501 gcgatttgcg tttcgccgtc cactatatgt acaccaacga cagcgaaatc agcggcaata
    19561 tttccgtggg caacaatatg ggctatgtgc tgatgttttc cgagcggctc aaagtattcg
    19621 acaatatcgc cgtcggcagc cgcgatcagg gcattatgct caactatgtc aactattccg
    19681 atattcacga caacattatc aacaaagcgg gcaagtgcgt atttgcctat aatgccaact
    19741 acgataaact tttcgccaat cattttgaaa actgccaaat cggcatacac tttaccgccg
    19801 ccatcgaagg cacgtccctg cacgacaatt ccttcatcaa caacgaaagc caggtcaaat
    19861 acgtcagcac gcgctttctc gactggagcg agggcggaca cggcaactat tggagcgaca
    19921 acagcgcgtt cgatttgaac ggcgacggct tcggcgacag cgcgtaccgg cccaacggca
    19981 tcatcgacca aatcatctgg cgcgcgcccg tatcgcgtct cttgatgaac agtcccgcaa
    20041 tcagcatcgt caaatgggcg caggcgcagt ttcccgccgt tctgcctggc ggcgtggtgg
    20101 acagcaaacc gctgatgaag ccttatgccc ccaaaattca aacccgttat caggcgatga
    20161 aggacgagtt gctcaaagaa gccgaaacgc ggcagtcgga atggggcagg gcggaaaacg
    20221 ggtctttgaa ctagtctgtt tcagacggca tccggattca aatgccgtct gaaaacacaa
    20281 aaggaacaac catgaccaca catcatgtcg aattgaggaa ggtaaccaaa cggttcgggg
    20341 cgcaaaaagc cgttaaccaa gtcgatttgg ttttgaaggc aggagaaagc gtcgggcttg
    20401 ccggacacaa cggcgcgggc aagtccacca ttatgaagct gatactcggg ctgattaccc
    20461 cgaccgaagg cgaagtgatg cttttgggcg aacgtaccgg cagcaaagcg ggggcgcggc
    20521 ttcgcagcca aatcggctac ctgcccgaaa ctgttgcgtt gcacccttcg ctgaccggca
    20581 tcgaaacgct ggatttttat gccaaactta aaaaacagcc gctcacgcag aatcgggggc
    20641 tgctcgagcg cgtcggcatt tcacaggcgg cacaccgccg cgtcggcact tattctaaag
    20701 ggatgcgcca acgccttgcc ttggcacaag ccctgctggg cgagcccaaa gtcctgctgt
    20761 ttgacgaacc gacaaccggc ctcgaccctg catcaaggca aatgttttac gaagtcgtgc
    20821 gcgaactcaa cgggcgcggc gcgaccgtat tgctcagtac ccacgccctt gccgagttgg
    20881 acgggcacgc cgaccgcatt atcgtggatt aaatttaatc cactatatgc gggtatggcg
    20941 ggtttgagcg gacaaatcag cctgaccgtc cccgttttgc tgaccgctca ggttttatgg
    21001 gttatcattc cgcttgtttt ggcagccgga atttttagaa agcgacaaat atgaaaaaaa
    21061 ccctgttggc aattgttgcc gtttccgcct taagtgcctg ccggcaggcg gaagagggat
    21121 cgccgccttt accccggcag attagcgacc gttcggtcgg acactattgc agtatgaacc
    21181 tgaccgaaca caacggcccc aaagcccaga ttttcttgaa cggcaaaccc gatcagcccg
    21241 tttggttctc caccatcaag cagatgttcg gctataccaa gctgcccgaa gagcctaaag
    21301 gcatccgcgt gatttacgtt accgatatgg gcaatgttac cgattggacg aatcccaatg
    21361 ccgacacgga gtggatggat gcgaaaaaag ccttttacgt catcgacagc ggctttatcg
    21421 gcggtatggg tgcggaagac gcgctgccgt tcggcaacaa agagcaggct gagaaatttg
    21481 caaaggataa aggcggtaag gttgtcggtt tcgacgatat gcctgatacc tatattttca
    21541 aataatattg aaaaaaccgg ccgaaacttt aaaaacgagt ttcggtcggt ttttcttttc
    21601 ttgttcggta tagtgtcggc aggaaagaac cttcacatcc cgccgtaatt cggcccgctc
    21661 gcgccttcgg ggcaaatcca agtgatgttt tgcgtcgggt ctttgatatc gcaggttttg
    21721 cagtgcacgc agtttgccgc gttgatttgc aggcgcggat tgccgttttc ttcaacaatt
    21781 tcgtacacgc cggccggaca atagcgcgtt tcgggcgagg cgtattcttt gtagttcacg
    21841 tctatcatcg tttgcggatt gttcagcacc aaatggtcgg gctggttttc ttcgtgcgcg
    21901 agattggcaa ggaagacgct gctcaagcgg tcgaaggtca acacgccgtc gggtttcgga
    21961 taatcaatcg gcttgcacgc ggcggctttt ttgagctgct cgttgtcttt gccgtgatgt
    22021 ttcaaggtcc acggggcttt gcctctgaaa atcatctgat cgatgccggt gtagattgag
    22081 ccgaggtaaa cgccccattt gaatgacgga cggacattgc gcgcggcgta aagctcttga
    22141 tacagccagc tttgttcaaa acgttgctga taatccgccg cctctttgcc gctgtcgaag
    22201 ttttccactt cttcaaggtt ttccaacaag gggaacacgg cttctgcggc gagcatggcg
    22261 gatttcatcg cggtatgaat gcctttgatg cgcggcatat tgaggaagcc tgccgcgtcg
    22321 ccgattaaaa cgccgccttt gaacgagagc ttcggcaaac tttgcaaacc gccttcaatc
    22381 agcgaacgcg cgccgtaagc gatgcggcgg ccgccttcaa aggttttgcg gatttcggga
    22441 tgggttttga aacgttggaa ctcttcaaac ggcgacagat aagggttttg atagtccaaa
    22501 ccgaccacga aaccgacggc gactttgttg tcatcgaaat ggtaaacaaa cgcgccgccg
    22561 taggttttgc tgtccagcgg ccagcccgcg ctgtgcacca ccaagccggg ctgatgtttt
    22621 tcagacggca cttcccaaat ttctttgatg cccaagccgt aagtttgcgg ctggctgttt
    22681 tggtcgagtt ggaaacgttc gatgacttgt ttggaaagcg aaccgcgaca accttcggca
    22741 aacagagttt gctgcgccca aagctccatg ccgggctgga aactgtcggt cggctcgccg
    22801 tctttgccaa tgcccatatt gccggttgca atgcctttga ccgaaccgtc ttcgtgatac
    22861 agcacttcgg cggcggcaaa gcccggataa atttccacgc ccaaattttc cgcctgctcc
    22921 gccaaccagc gcacgacttc gcccaagctg acgatgtagt tgccgtgatt gtcgaaattt
    22981 ggggtaatag gcagattgaa cgcttttttc tcagtcagga acaacacttt gtcctgcgtt
    23041 accgtacgcg tcagcggcgc gcctttttct ttccagtcgg gaatcaactc attcagcgca
    23101 atcggatcga taaccgcgcc cgccagcgaa tgtgcacccg cctccgaacc tttctccacc
    23161 acgcaaacgc tgatttcgcg cccattttgt tcggcaagct gcttgagttt gatggcggcg
    23221 gacaaacccg atgggcctgc gccgacaatc acgacatcgt attgcatact gtcgcgggtg
    23281 atggattctg tcatggcggt tcctgtgtat ttattattga attgcaaatc cgtaattata
    23341 caacgagaac atatagttac caaatacaac aaaggtcgtc tgaaaaccat attttcggtt
    23401 ttcagacgac ctttgtcgaa atttcaataa gcacgccacc attttacctg tccgaccgca
    23461 aactccgtct gacgtttcgg actgcgtgtg aaaaacgcct tatccccgcc ggcatccctc
    23521 cctttcggca cgaccgccaa aatcttacct gccaaatttc cctcacgggt ttgccaagca
    23581 tccaaaaact gcgccctgct catcgaaaca tgacccagcg acgggtcggc aagcaaaacc
    23641 gtattgccgt ctataccgcg caataccgag aaatgatcat ccttacggta tttcagatac
    23701 acgatgacgg ggatttgcaa ctgtgcaagc tgctcgaaag acagggcata gcctttcgct
    23761 tcaaaaccca aatcaggcat aatgcgccgc atatcctcaa acgacgcggg catctgctcc
    23821 ttatccagtt tttttaacac gtcctcttcc gtcagctttt gcccgtaaaa attgttcaaa
    23881 agcgtcacca ccgaagccgc cccgcaggaa aaatccaaat cctgctttac aatattgaaa
    23941 tcgcgccttt ctttccaact ctgcactttg atttttccat aagcaacagg attatagtgg
    24001 attaaattta aaccagtacg gcgttgcctc gccttgccgt actatctgta ctgtctgcgg
    24061 tttcgtcgcc ttgtcctgat ttttgttaat ccactatagg tttccgtgcg gacgtgttca
    24121 gattcccgcc ttcgctggaa taacggcgga gcagtttctg cttttccgat aaatgaccgt
    24181 aacttaaaat cccgtcatcc ccacgaaagc aaaaatcctg cctgtcggat ttcggttttt
    24241 ttgggcgttt cgggaaactt ataaatcgtc attcccgcgc aggcgggaat ccggtttgct
    24301 cggtttcggt ttttcgggcg tttcgggaaa ctgatgaatc gtcattcccg cgcaggcggg
    24361 aatctagaac gcgggacggc ggcaatattc
//
LOCUS       DBBZXU010000018        23974 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.018, whole genome shotgun sequence.
ACCESSION   DBBZXU010000018 DBBZXU010000000
VERSION     DBBZXU010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 23974)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23974)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23974
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.018"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(93..932)
                     /locus_tag="ACJJDE_000630"
     CDS             complement(93..932)
                     /locus_tag="ACJJDE_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HGG7540603.1"
                     /translation="MKQLRDNKAQGSALFTLVSGIVIVIAVLYFLIKLAGSGSFGDVD
                     ATTEAATQTRIQPVGQLTMGDGIPVGERQGEQIFGKICIQCHAADSNVPNAPKLEHNG
                     DWAPRIAQGFDTLFQHALNGFNAMPAKGGAADLTDQELKRAITYMANKSGGSFPNPDE
                     AAPADNAASGTASAPADGAAPAEAKAEDKGAAAPAVGVDGKKVFEATCQVCHGGSIPG
                     IPGIGKKDDWAPRIKKGKETLHKHALEGFNAMPAKGGNAGLSDDEVKAAVDYMANQSG
                     AKF"
     gene            1217..1292
                     /locus_tag="ACJJDE_000631"
     tRNA            1217..1292
                     /locus_tag="ACJJDE_000631"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1250..1252,aa:Arg,seq:ccg)
     gene            complement(1357..2550)
                     /locus_tag="ACJJDE_000632"
     CDS             complement(1357..2550)
                     /locus_tag="ACJJDE_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HGG7540604.1"
                     /translation="MYRHIEYYPGDPILSLVETFKNDPRPEKVNLSIGIYFDDEGKMP
                     VLESVRRAETARAATPAPSPYLPMEGLDTYRSAVQHLLFGKDNPALAQGRIATVQTLG
                     GSGALKVGADFLHRWFPEARAYVSDPTWDNHRGIFEGAGFEVGTYPYYDPATVGVKFD
                     EMTAFFNTLPENSVLILHPCCHNPTGVDMSEQQWDEVLHIIKTRKLIPFMDIAYQGFG
                     GDLDSDAYAVRKAVEMELPLFVSNSFSKNLSLYGERVGGLSVVCPNKEEADLVFGQLK
                     FTVRRIYSSPPAHGAYIAADVMNSPELYALWQNEVYMMRDRIRAMRQKLYDVLTAQIP
                     DRDFTYFIKQRGMFGYTGLSVEQVRRLRDEFAVYLLDSGRMCVAGLNTSNTDYVARAF
                     AEVLK"
     gene            complement(2571..3659)
                     /gene="trmA"
                     /locus_tag="ACJJDE_000633"
     CDS             complement(2571..3659)
                     /gene="trmA"
                     /locus_tag="ACJJDE_000633"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030697 - tRNA
                     (uracil(54)-C5)-methyltransferase activity, S-adenosyl
                     methionine-dependent [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HGG7540605.1"
                     /translation="MNDYTQQLQGKKDYLKTLFAGLDVPEWEVYESPDKHYRMRAEFR
                     IWHEGGEMFYAMFEKGQKASGASMIRCDRFEAASEAVNRLMPELIAAAAQSPELKKRW
                     YAVEFLSTLSGEMLVTMIYHKRLDAEWMQAAQALQQQLDISVIGRSRGQKIVLKQDYV
                     TETLKVGNRDFRYRQIEGSFTQPNAAVCQKMLEWACGAAEGLDGDLLELYCGNGNFTL
                     PLSEKFERVLATEISKTSISAAQWNIEANRIGNIKIARLSAEEFTEAYTRKREFKRLK
                     DGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLVETH
                     AVERAALFDQFPFTHHIESGVLLKKKIL"
     gene            3806..4906
                     /gene="aroC"
                     /locus_tag="ACJJDE_000634"
     CDS             3806..4906
                     /gene="aroC"
                     /locus_tag="ACJJDE_000634"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HGG7540606.1"
                     /translation="MAGNTFGQLFTVTTFGESHGAGLGCIIDGCPPGLELSEADIQFD
                     LDRRKPGTSRHVTQRREADQVEILSGVFEGKTTGTPIALLIRNTDQRSKDYGNIATSF
                     RPGHADYTYWHKYGTRDYRGGGRSSARETAARVAAGAVAKKWLKEKFGTEITAYVTQV
                     GEKEIRFEGCEHISQNPFFAANHSQIAELENYMDGVRKSLDSVGAKLHIEAANVPVGL
                     GEPVFDRLDAEIAYAMMGINAVKGVEIGAGFDSVTQRGSEHGDELTPQGFLSNHSGGI
                     LGGISTGQDIRVNIAIKPTSSIATPRRSIDINGNPIELATHGRHDPCVGLRSAPIAEA
                     MLALVLIDHALRHRAQNADVQVNTPDITLSNK"
     gene            4998..5423
                     /locus_tag="ACJJDE_000635"
     CDS             4998..5423
                     /locus_tag="ACJJDE_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ProQ/FINO family protein"
                     /protein_id="HGG7540607.1"
                     /translation="MTQETALGAALKSAVQTMSKKKQTEMIADHIYGKYDVFKRFKPL
                     ALGIDQDLIAALPQYDAALIARVLANHCRRPRYLKALARGGKRFDLNNRFKGEVTPEE
                     QAIAQNHPFVQQALQQQSAQAAAETLSVEAEAAESSAAE"
     gene            complement(5497..7482)
                     /gene="parE"
                     /locus_tag="ACJJDE_000636"
     CDS             complement(5497..7482)
                     /gene="parE"
                     /locus_tag="ACJJDE_000636"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HGG7540608.1"
                     /translation="MAKNNQYSESSITVLKGLEPVKERPGMYTRTDSPTHICQEVIDN
                     AADEALGGFATAIDVQIHEDGSLSVRDNGRGIPVGLHPEEGVPVVELVFTRLHAGGKF
                     NKKDGGSAYAFSGGLHGVGVSVTNALSTRLEVTVKREGKIHRIVFAGGDVVEPLAQVG
                     KCAVKDSGTEVRVWPDGKYFESPNYSIPELERLLRAKAVLLPGVRVSLTRPVKGEDEA
                     HTQTWHYPDGLKSYLTDLIADAQEAVPLFSCENYISDEHNGDFSIGEGAAFALTWLEE
                     GSCANESYVNLIPTPLGGTHEAGLKQAVFNAVNNFINLHNLLPRGVKVQSDDVFGKTA
                     FVLSARVLDPQFQGQTKDKLTNRDALKLVAAVAGDPLELWLNQNVDFGKKIAELAIRQ
                     AQARMRSVKKIEKKKGSGVAVLPGKLTDCESEDIRENELFLVEGDSAGGSAKLARDKA
                     TQAILPLRGKVLNSFEVHPDQLFGNAEIHDISVAIGVDPHGINDHPDLSGLRYGKIAI
                     LSDADVDGSHIQVLLLTLFYRHFPKLVADGHIYVAQPPLFRVDVNAQGKSKPARKFYA
                     LDQNELDGILERLQKEGVKETAYSISRFKGLGEMNPDQLKDTTMHPDTRRLLQVQIPE
                     GADDETRDIFVKLMGKGEAAARRAWMEREGDTAELDI"
     gene            complement(7549..8097)
                     /locus_tag="ACJJDE_000637"
     CDS             complement(7549..8097)
                     /locus_tag="ACJJDE_000637"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HGG7540609.1"
                     /translation="MNLTEGDTVLDREGYRPNVGIILINNRDEVFWGKRVREHSWQFP
                     QGGIKPGESPETAMYRELYEEVGLLPQHVKIIGRTRDWLRYDVPNNWVRREWRGSYRG
                     QKQIWYLLRLTGRDCDVNLRATRHPEFDGWRWHQYWAPVDEVIDFKRDVYLGALKELS
                     SRFLRGMESYEDFAARQSSDNR"
     gene            8238..9533
                     /gene="serS"
                     /locus_tag="ACJJDE_000638"
     CDS             8238..9533
                     /gene="serS"
                     /locus_tag="ACJJDE_000638"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004828 - serine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006434 - seryl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HGG7540610.1"
                     /translation="MLDIQLLRSNTAAVAERLAARGYEFDAARFNALEEQRKAVQVKT
                     EELQASRNSISKQIGALKGQGKHEEAQAAMDQVAQIKTDLEQAAADLDAVQKELDAWL
                     LSIPNLPHESVPAGKDETENVEVRKVGTPREFDFEIKDHVDLGEPLGLDFEGGAKLSG
                     ARFTVMRGQIARLHRALAQFMLDTHTLQHGYTEHYTPYIVDDTTLQGTGQLPKFAEDL
                     FHVTRGGDETKTTQYLIPTAEVTLTNTVADSIIPSEQLPLKLTAHSPCFRSEAGSYGK
                     DTRGLIRQHQFDKVEMVQIVHPEKSYETLEEMVGHAENILKALELPYRVITLCTGDMG
                     FGAAKTYDLEVWVPAQNTYREISSCSNCEDFQARRLKARFKDENGKNRLVHTLNGSGL
                     AVGRTLVAVLENHQNADGSINIPAALQPYMGGVAKLEVK"
     gene            complement(9606..10604)
                     /locus_tag="ACJJDE_000639"
     CDS             complement(9606..10604)
                     /locus_tag="ACJJDE_000639"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008720 - D-lactate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0070404 - NADH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7540611.1"
                     /translation="MKIAIYGTKSYDREHFTRANRHFGFELEFFDFMLDVKTAKMAEG
                     AEAVCIFVNDDGSRPVLEKLAQIGVKTVALRCAGFNNVDLKAAEELGLKVVRVPAYSP
                     ESVAEHTVGLMLTLNRRIHKAYQRTRDANFSLEGLTGFNMYGKTAGVIGTGKIGIATM
                     RILKGFGMNLLAYDPFCNPEAEKLGGRYVDLDELYARSDIITLHCPSTPENHYMLNEA
                     AFDKMKDGVMIINTSRGGLIDSSAAIEALKRRKIGALGMDVYENERELFFEDKSNDVI
                     TDDVFRRLSSCHNVLFTGHQAFLTEEALGNISEVTLSNIREVGQTGDCGNAVRADG"
     gene            complement(10729..11805)
                     /gene="prfA"
                     /locus_tag="ACJJDE_000640"
     CDS             complement(10729..11805)
                     /gene="prfA"
                     /locus_tag="ACJJDE_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HGG7540612.1"
                     /translation="MKPSILEKLQQLGDRLEEVTHLLGQPEATADMDNYRKLTREHAE
                     LTPVVEVFQNYRLAQSDLADAEEMLSDPEMKDFAAEEIEAAKAKINTLDTELQKLLLP
                     KDADDDKNIFIEIRAGTGGDEAALFAGDLLRMYSRYAERNRWQVEIVSANESELGGYK
                     EVIARIVGLGAYSRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPEADELEDIELN
                     PADLRIDTFRASGAGGQHINKTDSAVRITHLPTGMVVECQDGRSQHANKAQAMKVLAA
                     RLNDAQKREAQAKEAAERKSLIGSGDRSERIRTYNYPQGRVTDHRINLTLHKLDFVMD
                     GDLAEITDALIAEHQAELLAAMGD"
     gene            complement(11895..12665)
                     /locus_tag="ACJJDE_000641"
     CDS             complement(11895..12665)
                     /locus_tag="ACJJDE_000641"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HGG7540613.1"
                     /translation="MRLTDTHCHLADSVLRGNLAQVLAEARQAGVWRFIVPATRPQDW
                     QSVAELSEMPSEHGQIRIALGIHPWFSDGIAERDCVRLEAMLARYPQAWVGEIGLDFY
                     DKTQTPPQRERQIQVFVRQLAIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHA
                     FSGSAEEARVLTKLGFKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFMLKKEI
                     NTPANILWIAEIAAQIRGVGVADIAAITERNADSLLRP"
     gene            complement(12668..13660)
                     /locus_tag="ACJJDE_000642"
     CDS             complement(12668..13660)
                     /locus_tag="ACJJDE_000642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HGG7540614.1"
                     /translation="MKQKIFVLYTGGTIGMTQSSEGLRPDTALVGQALAPFSNGMDFD
                     WHVCGTLIDSSAVQLQNWCAWLDIIAAALPQYDGVLVLHGTDTLAYTANLFALALQGL
                     DKPIVLTGSQWPYNAVGSDAPRNLATAVAAFPLGLKQTLIAFDGKLYPAVGSSKVSTE
                     TAAGFDNPHFGALAEWDETQGWHNVRIPNQDAADVSDGLKIRYPDPQAKIAVRTLIPG
                     FAVQELADGLGQLPAHALILQSYGHGNTPADEGFIRAVQDFTQQGKLLLNISQVRQGR
                     TAAVYAQGNAFRNSGIINGGKCNLETATALMTLAVSEGWGADEVKHELQRLGLV"
     gene            complement(13727..14410)
                     /locus_tag="ACJJDE_000643"
     CDS             complement(13727..14410)
                     /locus_tag="ACJJDE_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7540615.1"
                     /translation="MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISG
                     MGYTNPHIMFAVGMLGVLVGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFD
                     KYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
                     HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKA
                     AKKAAQKQQ"
     gene            complement(14599..15933)
                     /gene="glmM"
                     /locus_tag="ACJJDE_000644"
     CDS             complement(14599..15933)
                     /gene="glmM"
                     /locus_tag="ACJJDE_000644"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_function: GO:0016868 - intramolecular
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HGG7540616.1"
                     /translation="MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQK
                     PTVLIGKDTRISGYMLEAALVAGFTAAGVNVIQTGPLPTPGVAYLTRALRLSAGVMIS
                     ASHNAYSDNGIKFFAEGGVKLSDEIELEIEAKIDEEMKTQPSARLGRARRISGADDRY
                     IEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEK
                     CGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREG
                     INIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLEQLNQRGWLVGGEASGHILC
                     MDKHNTGDGIISALQVLAALQTLNQDLAAVCADWQPYPQTMINVRIGKGQNWQEASKD
                     VLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL"
     gene            complement(16063..16914)
                     /gene="folP"
                     /locus_tag="ACJJDE_000645"
     CDS             complement(16063..16914)
                     /gene="folP"
                     /locus_tag="ACJJDE_000645"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HGG7540617.1"
                     /translation="MARHGWQAGRFEIGLDKPKIMGIVNLTPDSFSDGGAYSQNAKTA
                     LAHAERLLKEGADILDIGGESTRPGADYVSSEEEWARVEPVLVEVAGWGVPVSLDTRR
                     TVVMEKALALGGIDIINDVAALTDEGAVELLARQTDTGICLMHMQGLPETMQINPKYQ
                     DVVGEVARYLKARAAECIAAGIAPQRITLDPGFGFGKTLQHNIALMRHLPELMAETGF
                     PLLIGVSRKRMIGELTGEADAAARVHGSVAAAVAAVARGAQIVRVHDVKATADALKVW
                     EALGINL"
     gene            complement(17241..18134)
                     /locus_tag="ACJJDE_000646"
     CDS             complement(17241..18134)
                     /locus_tag="ACJJDE_000646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HGG7540618.1"
                     /translation="MIIVMSRRAAEADIAGVVAFIRSRGLREHISHGDERTVIGAIGD
                     DRVLSVREVQTLPEVEKAVRILDTWKTVSRENRAEDSRVAAKGVAFGGGETVCIAAEP
                     SVWRNADAVFLDPFFTSANLYDTSSADEGRGRCRRLAEQTASAHGAGKPVLVRVRNVR
                     HVEAALNAGADILYLGGGLMSDLAVLNEAGSLNIPLVLCKDKHHSAEDWLNAAEYVVS
                     RGNRHLILGESGVLSHTKDHPYRLDVESIVKVRQISHLPVIANITGLWNRDMPQEILY
                     GLAKAAGACGIVGTCFEKSGG"
     gene            18225..20339
                     /locus_tag="ACJJDE_000647"
     CDS             18225..20339
                     /locus_tag="ACJJDE_000647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HGG7540619.1"
                     /translation="MDLLSVFHKYRLKYAVAVLTILLLAAVGLHASVYRTFTPENIRS
                     RLQQSIAHTHRKISFDADIQRRLLPRPTVILKNLTITEPGGDQTAVSVQETKIGLSWK
                     NLWSDQIQIEKWVVSSAELALTRDGKGVWNIQDLIDSQKRQASVNRIIVENSTVRLNF
                     LQEQLILKEINLNLQSPDSSGQPFESSGILVWGKLSVPWKSRGLFLSDGIGTPKISPF
                     HFEASTSLDGHGITISTTGSPSVRFNAGGADAAGLGLRADTSFRNLHLTAQIPTLALR
                     NNSIKIETVNGAFTAGGEYAQWDGSFKLDKANLHSGIANIGNAEISGSFKTPRHQTNF
                     SLNSPLVWTENKGLDAPRLYVSTLQDTVNRLPQPRFISRLDGSLSVPNLQNWNAELNG
                     TFDRQTVAAKFRYTHEDAPHLEAAVALQKLNLTPYLDDVRQQNGKIFPDTLAKLSGDI
                     EAHLKIGKVQLPGLQLDDMETYLHADKGHIALSRFKSGLYGGHTEGGISIANTRPATY
                     RLQQNASNIQIQPLLQDLFGFHSFSGNGDAVIDLTASGETRKELIRSLQGSLSLNISN
                     GAWHGIDMDNILKNGISGKTADNAAPSTPFHRFTLNSEISDGISRHIDTELFSDSLYV
                     TSNGYTNLDTQELSEDVLIRNAVHPKNKPIPLKITGTVDKPSITVDYGRLTGGINSRK
                     EKQKILEDTLLEQWQWLKPKEP"
     gene            complement(20403..21881)
                     /gene="ubiD"
                     /locus_tag="ACJJDE_000648"
     CDS             complement(20403..21881)
                     /gene="ubiD"
                     /locus_tag="ACJJDE_000648"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HGG7540620.1"
                     /translation="MKYKDLRDFIAMLEQQGKLKRIAHPVSPHLEMTEIADRVLRAEG
                     PALLFENPVKPDGTRYGYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEP
                     PKGIKDAFSKLPLLKDIWSMAPNVVKNAPCQEIVWEGENVDLYKLPIQHCWPEDVAPL
                     VTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFRKLNPDTPYP
                     VAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAEIVLE
                     GVIHPNETALEGPYGDHTGYYNEQDYFPVFTVERITMRENPIYHSTYTGKPPDEPAVL
                     GVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLR
                     QFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLG
                     GKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL"
     gene            complement(21901..22416)
                     /locus_tag="ACJJDE_000649"
     CDS             complement(21901..22416)
                     /locus_tag="ACJJDE_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2199 domain-containing protein"
                     /protein_id="HGG7540621.1"
                     /translation="MYTCTSCGEKHEDMPAIGFTAPDPYNQLSEEERIAYQAECDSDF
                     CIIRYPDQTDRFIRAVLPIPIIGHEETLEYGVWVSVSEKSFNDYQSHFHDNPENVVYF
                     GMICNRLPPYESDTFGMHCNVVTQPDGQRPLLQLHQGSEHPLVRDFYHGIEYAEAQAR
                     IGAVSESDCSG"
     gene            complement(22423..22857)
                     /locus_tag="ACJJDE_000650"
     CDS             complement(22423..22857)
                     /locus_tag="ACJJDE_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003790506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540622.1"
                     /translation="MCGLWLLRALTAKLPQQRYAALFITLFFAAVLVFGRHDSMYWYP
                     VLVNLMMLAVFGGSLFAGQTVIEKLARLQQPDLPEKAVRYTRRVTQVWCVFFIINGTL
                     AALLARLGRYDWWAVYTGVIAYVLMGMLFAGEWLYRKLVLKV"
     gene            complement(23138..23221)
                     /locus_tag="ACJJDE_000651"
                     /pseudo
     CDS             complement(23138..23221)
                     /locus_tag="ACJJDE_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222119.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
     gene            complement(23224..23724)
                     /locus_tag="ACJJDE_000652"
                     /pseudo
     CDS             complement(23224..23724)
                     /locus_tag="ACJJDE_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714696.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase chain length factor"
     gene            23825..>23974
                     /locus_tag="ACJJDE_000653"
     CDS             23825..>23974
                     /locus_tag="ACJJDE_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7540623.1"
                     /translation="MLRFFVLEVTARSAADILGIHPNSAALFYRKIRMVINHHLALAA
                     DEVFEG"
BASE COUNT         5479 a         6836 c         6222 g         5437 t
ORIGIN      
        1 tcctgatttt tgttaattca ctataaattc ccataaaaaa acggagcaga tacctgcccc
       61 gtttttattt aatccgaaat tttaatctaa atttaaaatt ttgcaccgga ttggtttgcc
      121 atataatcaa cagccgcttt gacttcgtca tcgctcaaac cggcattgcc gcctttggca
      181 ggcatcgcgt taaagccttc aagggcgtgt ttgtgcaagg tttctttgcc ttttttgata
      241 cgcggtgccc aatcgtcttt tttgcctatg ccgggaatac cgggaatcga accgccgtgg
      301 cacacctgac aggttgcttc gaagactttt ttaccgtcaa cgccgaccgc aggggctgcc
      361 gcacccttgt cttctgcctt cgcttctgcc ggagctgcac catcggcagg agcagaagct
      421 gttcctgaag cggcattgtc ggcaggcgca gcctcatcag gattcgggaa agaaccgccg
      481 cttttgttcg ccatgtaagt aatcgcccgt ttgagttcct gatcggtcag gtctgccgca
      541 ccgcctttgg caggcatggc gttaaagccg ttcagcgcgt gttggaacaa ggtatcgaag
      601 ccttgcgcga tacgcggtgc ccaatcgccg ttgtgttcca gtttcggagc gttcggcaca
      661 ttgctgtccg ccgcgtggca ttggatacag attttgccga aaatctgttc gccttggcgt
      721 tcgccgacgg ggatgccgtc gcccatcgtc aattgtccga cgggctggat acgggtctgc
      781 gttgccgctt ccgtagtggc atcgacatcg ccgaacgagc cgctgcccgc cagcttaatc
      841 aggaaataaa ggactgcaat aacaataacg ataccgctca caagggtaaa cagtgcagag
      901 ccttgggctt tgttgtcgcg gagttgtttc atttggtagg cctcgccgtc aggttaggtt
      961 gtgctgtaaa ttatagtttg gtgtgttaaa cgcagttaac aatattttgc tggattatac
     1021 tgaattcaca gggtctttcc aatcgctatc attgaaaata tgaaaaaatt tgccaacggt
     1081 atctgtataa aacaaataat cctttgaaaa taatggttta tcctcaagaa aactctcctt
     1141 atgccgccat acgccgcctg ccggcgcaag ataacctttg ccaatttgca gaatttacgt
     1201 taaccttacg ttttacgcac ccatagctca gttggaagag tgtcagtttc cgaagctgga
     1261 ggtcacaggt tcgatccctg ttgggtgcgc caattataaa gagaccgtct gaaagataaa
     1321 tatttttcag acggtctttt gacttacttc aaactcttat ttcaagactt ccgcaaatgc
     1381 gcgggcaaca tagtcggtat tcgacgtatt cagtccggcg acgcacatcc tgccggaatc
     1441 cagcaggtaa acggcaaatt cgtcgcgcag cctgcggact tgttccacgc tcaatcctgt
     1501 gtagccgaac atgccgcgct gtttgatgaa ataagtgaaa tcgcgatcgg ggatttgcgc
     1561 agttaagaca tcataaagtt tctgccgcat cgcacggatg cggtcgcgca tcatataaac
     1621 ctcgttttgc cacaaggcgt aaagttcggg gctgttcatc acgtcggcgg cgatatacgc
     1681 gccgtgcgcg ggcgggctgg agtagatgcg gcggacagtg aatttgagct gtccgaacac
     1741 caaatccgct tcttccttat tcgggcaaac cacgctcagg ccgccgacgc gctcgccgta
     1801 gagcgacagg ttttttgaga aggaattgct gacgaacaag ggcaattcca tttccaccgc
     1861 tttgcggacg gcgtaggcat cgctgtccaa atcgccgccg aagccttggt aggcgatgtc
     1921 cataaacgga atcagtttgc gcgttttgat gatgtgcaac acttcgtccc attgttgttc
     1981 cgacatatcc acgccggtcg ggttgtggca gcagggatgg aggatcagga cgctgttttc
     2041 gggcagggtg ttgaaaaacg cggtcatttc gtcgaatttc acgccaacag tggcagggtc
     2101 gtaatatggg taagtgccga cctcgaaacc tgcgccttca aaaatgccgc gatggttgtc
     2161 ccaagtcggg tcgctgacgt aggcgcgcgc ttcgggaaac cagcggtgca ggaagtccgc
     2221 cccgactttg agtgcgcccg agccgcccaa ggtttgtacg gtagcgatgc gtccttgcgc
     2281 gagcgcaggg ttgtctttgc cgaacaataa atgctgcacc gcgctgcggt aagtgtccaa
     2341 gccttccatc ggcaggtagg gcgacggcgc aggcgtggcg gcgcgggcgg tttcggcacg
     2401 gcgcacggat tccaacacgg gcattttgcc ttcgtcgtcg aaataaatgc ctatgctcaa
     2461 attgactttt tcagggcgcg ggtcgttttt gaaggtttcg accaaactca aaatcgggtc
     2521 gcccggatag tattcgatgt gtcggtacat agtccttacc ttttactttt tcaaaggatt
     2581 ttctttttca acaatacacc actttcgata tggtgcgtaa acgggaattg gtcgaacagg
     2641 gcggcgcgtt cgaccgcatg ggtttccacc aaggtgtcca aattggcacg cagcgtttcg
     2701 ggattgcagg aaatgtagat gatgttgtca aactgcgaca ccagcttcaa agtttcctca
     2761 tcgataccgg cacgcggcgg atcgacgaaa atagtggaaa atgcgtaatc cgtcaaagca
     2821 ataccgccat ccttaaggcg tttaaactca cgttttctgg tataggcttc ggtaaattct
     2881 tcagcagaca gacgggcgat tttgatgttg ccgatgcggt tggcttcgat attccattgc
     2941 gccgcgctga tggaggtttt ggagatttcg gttgccaaaa cacgttcaaa cttttcagat
     3001 aaaggaagcg taaagttgcc gtttccgcaa tacagttcga gcaaatcccc atccaatcct
     3061 tctgctgcac cgcaggccca ttcaagcatt ttctgacaca cggcggcatt cggttgggta
     3121 aaactgcctt caatttgccg ataacggaaa tcccggttgc cgaccttcaa agtttccgtt
     3181 acatagtcct gttttaagac tattttctgt cccctgctcc gcccaataac ggaaatatcc
     3241 aactgttgct gtaacgcttg cgccgcctgc atccactcag catcaagcct tttgtggtaa
     3301 atcatggtaa ccagcatttc cccgctgagc gtggacagaa attcgacggc ataccagcgt
     3361 tttttgagtt cgggggattg cgcggcggcg gcgatcagct cgggcatgag gcggttgaca
     3421 gcctcggaag ctgcttcaaa acggtcgcag cgtatcatgc ttgcgccgct ggctttctgc
     3481 cctttttcaa acatggcata aaacatttcc ccgccttcgt gccaaatacg gaactcggca
     3541 cgcatacggt aatgtttgtc cggagattcg tacacttccc actcaggaac atccaaacct
     3601 gcaaaaaggg ttttaaggta gtctttttta ccttgaagct gctgcgtgta gtcattcata
     3661 tcgctatcct gaaaaatcag accggattat aagccgattt gcctcgccgc acgcaaactc
     3721 tttgactgcc gccccttcaa tgacggacgg gcttttgtgc taaaatccgc catctttcca
     3781 cactataccg ataaagggaa aaatcatggc aggcaacact ttcggacaac tcttcaccgt
     3841 taccaccttc ggcgaaagcc acggcgcggg tttgggctgt atcatcgacg gctgcccgcc
     3901 cggcttggaa ttaagcgaag cggatatcca atttgacctc gaccgacgca aacccggcac
     3961 cagccgccac gttacccaac gccgcgaagc cgaccaagtc gaaatcctct ccggcgtatt
     4021 cgaaggcaaa accaccggca cgcccatcgc cctcttaatc cgcaataccg accagcgcag
     4081 caaagactac ggcaacatcg ccaccagctt ccgccccggc cacgccgact atacctattg
     4141 gcacaaatac ggcacgcgcg actaccgcgg cggcggcagg agctccgccc gtgaaaccgc
     4201 cgcccgcgtt gctgccggag ccgttgccaa aaaatggttg aaagaaaaat tcggcacgga
     4261 aatcaccgcc tacgttaccc aagtcggcga aaaagaaatc cggtttgaag gctgcgaaca
     4321 catttcccaa aatccttttt ttgccgccaa ccatagccaa attgccgagc tggaaaacta
     4381 tatggacggc gtgcgcaaat ccttggattc cgtcggcgcg aagctgcata tcgaagcagc
     4441 caatgtccct gtcggcttgg gcgaacctgt ttttgaccgc ctcgatgccg aaatcgccta
     4501 cgcgatgatg ggcatcaacg ccgtcaaagg cgtggaaatc ggcgcaggtt ttgacagcgt
     4561 aacgcaacgc ggcagcgaac acggcgacga actgaccccg caaggcttcc tgtccaacca
     4621 ctcaggcggc atcctcggcg gcatcagcac cgggcaagac atccgcgtca atatcgccat
     4681 caaacccacc agctccatcg ccaccccgcg ccgcagtatc gacatcaacg gcaaccccat
     4741 cgaactcgcc acgcacggca ggcacgaccc ctgcgtcgga ctgcgctccg cgccgatcgc
     4801 cgaagccatg ctcgcgttag tcctcatcga ccacgccctg cgccatcgcg cgcaaaatgc
     4861 cgacgttcag gttaatacgc ccgacattac cctttcaaac aaataaaaat ttagccaaaa
     4921 cacagacttt ataatagaat atcgagcatt gccgtgcagc cttgacgcac gggtttgttt
     4981 agaggaatac aaccgaaatg acacaagaaa ccgctttggg cgcggcacta aaatccgccg
     5041 tccaaactat gagcaaaaag aaacagaccg aaatgatcgc cgaccacatc tacggcaaat
     5101 acgatgtgtt caaacgcttc aaaccgttgg cgctcggcat cgatcaggat ttgattgccg
     5161 ctttgccgca atacgatgcc gcactgattg cacgcgtcct cgccaaccac tgccgccgtc
     5221 cgcgctatct gaaagccttg gcgcgcggcg gcaaacgttt cgatttgaac aaccgtttca
     5281 aaggcgaagt tacccccgaa gaacaggcga tcgcgcaaaa ccatcctttt gtgcagcagg
     5341 ctttgcaaca gcagtccgcc caagctgccg ccgaaacgct gtctgttgaa gccgaagcag
     5401 ccgaatcttc cgcagcagaa taaatcccca aacgaaatgc cgtctgaaaa ccgatttggt
     5461 ttcagacggc attttttcgt atgcggcaat cacggttcaa atatcgagtt ccgccgtatc
     5521 gccttcgcgt tccatccagg cacggcgggc ggcggcttcg cctttgccca tcagtttgac
     5581 gaagatgtcg cgcgtctcgt catccgcgcc ttctgggatt tgtacctgca acaggcggcg
     5641 ggtgtcgggg tgcatggtag tatctttgag ctggtctggg ttcatctcac ccaagccttt
     5701 gaaacggctg atggaataag cagtttcttt aacgccttct ttttgcagcc gctctaaaat
     5761 gccgtcaagt tcgttttggt cgagggcgta gaatttgcgg gcgggtttgc ttttaccttg
     5821 tgcgttgaca tctacgcgga acagcggcgg ctgggcgacg tagatgtgtc cgtcagcgac
     5881 cagtttcggg aagtggcggt agaacagggt cagcagcaaa acttgaatat gcgagccgtc
     5941 cacgtcggca tcggacagga tggcgatttt gccgtaacgc aggccgctta aatcgggatg
     6001 gtcgttgatg ccgtgcggat cgacgccgat ggcaactgaa atgtcgtgga tttcggcgtt
     6061 gccgaagagc tggtcggggt ggacttcaaa gctgttgagc actttgccgc gcaggggcag
     6121 gatggcctgg gtggctttgt cgcgggcgag tttggctgag ccgccggcgg aatcgccttc
     6181 gacaaggaag agttcgtttt cgcggatgtc ttcgctttcg cagtcggtca gcttgccggg
     6241 caggacggcg acgccgctgc cttttttctt ttcgattttc ttaaccgaac gcatccgcgc
     6301 ctgcgcctga cggatggcga gttcggcaat ttttttaccg aagtccacgt tttggttcag
     6361 ccacaattcc aaagggtcgc ccgctacagc ggcgacaagt ttcagcgcgt cgcggttggt
     6421 cagcttgtct ttggtctgac cttggaactg cgggtcgagg acacgggcag agaggacaaa
     6481 ggcggttttg ccgaacacgt cgtcgctttg tactttcacg ccgcgcggca agaggttgtg
     6541 cagattgatg aaattgttga cggcgttgaa cacggcttgt ttcaagcctg cttcatgcgt
     6601 gccgcccaaa ggggtgggga tgaggttgac atagctttcg ttggcacacg agccttcttc
     6661 cagccaagtc agggcaaacg ccgctccttc gccgatgctg aaatcgccgt tgtgttcgtc
     6721 tgaaatgtag ttttcgcaag agaacagcgg cacagcttct tgcgcgtcgg caatcaggtc
     6781 ggtcagatag cttttcaggc cgtcggggta gtgccaggtt tgggtgtgcg cttcgtcttc
     6841 gcctttgacc ggacgggtca gggaaacgcg cacacccggc agcagcacgg ctttggcacg
     6901 cagcaggcgt tcgagttcgg gaatgctgta attcgggctt tcaaaatatt tgccgtccgg
     6961 ccagacgcgc acttcggtgc cgctgtcttt gacggcgcat ttgcccactt gtgccaacgg
     7021 ttcgaccacg tcgccgccgg caaacacgat acggtggatt ttgccttcac gtttgaccgt
     7081 tacctcaagg cgggtggaga gggcgttggt gacggatacg cccacgccgt gcagtccgcc
     7141 tgaaaaggca tacgcgctgc cgccgtcttt tttgttgaac ttgccgcccg cgtgcagacg
     7201 ggtgaacacg agttcgacta cgggtacgcc ttcttcaggg tgcaggccga cgggaatacc
     7261 gcggccgtta tcacggacgg aaagcgaacc gtcttcatga atttgcacgt cgattgcagt
     7321 cgcgaaacca cccaacgcct cgtccgccgc attatcaatc acttcctgac agatgtgggt
     7381 cgggctgtcg gtgcgggtgt acatgccggg acgttctttg accggctcca agcctttgag
     7441 gacggtgatg ctggattcgc tgtattggtt gtttttagcc ataggaataa tctgaaagta
     7501 agaaaaacaa cgctttcaga cggcctgaaa gcgttgcgtt ccgttgtttt agcggttgtc
     7561 ggaagattgg cgggcggcaa agtcttcata actttccata ccgcgcagga agcgggaaga
     7621 gagttctttc aacgccccca aataaacgtc gcgtttgaaa tcaatcactt cgtcaacggg
     7681 cgcccaatat tgatgccaac gccagccgtc aaattcgggg tggcgggtgg cgcgcaggtt
     7741 gacatcgcaa tctcggccgg tcaggcgcag gagataccaa atctgcttct gcccgcgata
     7801 ggatccgcgc cattcgcggc gtacccagtt gttcggcacg tcataacgca gccagtcgcg
     7861 cgtgcggccg ataattttga cgtgttgcgg caaaagcccg acttcttcgt acaactcgcg
     7921 gtacatggcg gtttcggggc tttcgcccgg cttgatgccg ccttgcggaa actgccaaga
     7981 atgttcgcgc acgcgcttgc cccaaaagac ttcgtcgcgg ttgttgatta agatgatacc
     8041 gacattgggg cgatagcctt ccctgtccaa cacggtgtcg ccctccgtta aattcaatct
     8101 tgggattttc ccacaaatcg gacggttttg acaaatcgga cgatagggtt caggcatgtc
     8161 gaaacacaga cggactcggg aaaatatctt aaatttggtt tacaataatg tgtttcaaat
     8221 tattcgggaa tcagaccatg ttagatatcc aattgctccg cagcaacacc gccgctgtgg
     8281 cggaacgctt ggcggcgcgc ggttacgagt ttgatgccgc gcgtttcaat gcgctggaag
     8341 aacaacgcaa agccgtccaa gtgaaaaccg aagaactaca agcctcgcgt aacagcattt
     8401 ctaaacaaat cggcgcactg aaaggtcagg gcaaacacga agaggcgcag gcggccatgg
     8461 atcaagtcgc ccaaatcaaa accgatttgg aacaggctgc cgccgatttg gatgccgttc
     8521 aaaaagaatt ggacgcatgg ttgttgagca tacctaacct gccgcacgaa agcgtacctg
     8581 ccggtaaaga cgaaaccgaa aacgtcgaag tccgcaaagt cggcaccccg cgcgaatttg
     8641 actttgaaat caaagaccat gtcgatttgg gcgaaccttt gggtttggat tttgaaggcg
     8701 gtgcaaaact ctccggcgca cgatttaccg tgatgcgcgg acaaatcgcc cgtctgcacc
     8761 gcgccttggc acagttcatg ctggatacgc acacgctgca acacggctac accgagcatt
     8821 acacgcctta tatcgttgac gatacgacgc tgcaaggtac gggccaacta ccaaaatttg
     8881 cggaagatct gttccacgtt acccgtggcg gcgacgaaac caaaaccacc caatacctga
     8941 ttccgacagc cgaagttacc ctgaccaata ccgttgccga cagcattatc ccgtccgaac
     9001 aactgccgct gaagctgacc gcgcattcgc cctgtttccg cagcgaggcg ggttcgtacg
     9061 gcaaagacac gcgcggtctg attcgccagc accagttcga caaagtggaa atggttcaaa
     9121 tcgttcatcc cgaaaaatca tacgaaacgc tggaagaaat ggtcggccat gccgaaaaca
     9181 tcctgaaggc tttggaactg ccctaccgcg tgattaccct gtgtaccggc gacatgggct
     9241 tcggcgcggc aaaaacgtat gacttggaag tttgggtgcc ggcgcaaaat acctaccgcg
     9301 aaatctcaag ctgctccaac tgcgaagatt tccaagcccg ccgcctgaag gcgcgtttca
     9361 aagacgaaaa cggcaaaaac cgcttggtac atactttgaa cggctccggt ttggcagtcg
     9421 gcagaacctt ggtcgccgtg ttggaaaacc atcaaaacgc cgacggcagc atcaacatcc
     9481 ctgccgcact gcaaccgtat atgggcggcg ttgccaagtt ggaagtgaaa taagccttaa
     9541 ccctgaacat aaatgccgtc tgaaacctgg ttcagacggc atttccttta aacttttaaa
     9601 acacatcaac cgtcggcacg aaccgcattg ccgcaatcgc cggtctgtcc gacctcgcgg
     9661 atattggaca gcgtaacttc cgaaatatta cccaacgcct cttccgtcaa aaatgcctga
     9721 tggccggtaa acagcacatt atgacaagac gacaggcggc ggaacacgtc gtcggtaatc
     9781 acatcgttgg atttgtcttc aaaaaacaat tcgcgttcgt tctcgtacac gtccataccc
     9841 aatgcgccga ttttccggcg tttcaacgcc tcaatcgcgg cagaactgtc aatcagcccg
     9901 ccacggctgg tgttgataat catcacgccg tctttcattt tgtcgaacgc cgcttcgttc
     9961 agcatatagt ggttttccgg cgtggagggg caatgcagcg tgatgatgtc cgaccgggca
    10021 tacagctcgt ctaaatccac atacctgccg ccgagttttt ccgcttcggg gttgcaaaac
    10081 ggatcgtaag ccagcaggtt cataccgaaa ccctttaaaa tccgcatggt tgcaataccg
    10141 attttccccg tgccgataac gcccgccgtt ttgccgtaca tattgaaacc ggtcagacct
    10201 tccagcgaaa aattcgcatc gcgggtacgc tgataggctt tgtggatacg gcggttcaac
    10261 gtcagcatca gaccgaccgt atgttccgca accgattcgg gcgaataggc aggcacgcgc
    10321 acgactttca agcccaactc ttcagccgcc tttaaatcca cattattgaa gccggcacaa
    10381 cgcaacgcca cagttttcac gccaatttgc gccaattttt ccaacacggg ccggctgccg
    10441 tcgtcgttta caaaaataca gaccgcctcc gcaccttccg ccattttcgc cgttttcaca
    10501 tccagcataa aatcaaaaaa ctccagctcg aagccgaaat gccggttggc gcgggtaaaa
    10561 tgttcgcggt cataactttt cgtaccgtaa atcgcaatct tcatcaatat gtccagttgt
    10621 cgcctatggt tgagaaacgg cataatacac tgaattcaaa caaatcagta gaatatggca
    10681 gattaaaatt gattgcatgc acggcatttc catttcaaaa cacaaaactc aatcgcccat
    10741 tgccgccaaa agctccgcct gatgttcggc aatcagggca tcggtgattt ctgccaaatc
    10801 gccgtccatc acaaaatcca gcttgtgcag ggtgaggttg atgcggtggt ctgttaccct
    10861 gccttgggga tagttgtagg tgcggatgcg ttcgctgcgg tcgccgctgc cgatgagaga
    10921 tttgcgctcg gcggcttctt tggcttgggc ttcgcgtttt tgcgcgtcgt tcaggcgggc
    10981 ggcgaggact ttcattgcct gcgctttgtt ggcgtgttgg ctgcggccgt cttggcattc
    11041 gaccaccatg ccggtgggca ggtgggtgat gcggacggcg gagtcggttt tattgatgtg
    11101 ctgaccgccc gcgccggatg cgcggaaggt gtcgatgcgc aggtcggcgg ggttcaactc
    11161 gatgtcttcc aattcgtccg cttcgggcat gacggcaacg gtgcaggcgg aggtgtggat
    11221 gcggccttgg ctttcggtgg ctggaacgcg ctgcacgcgg tgtccgcccg attcgaattt
    11281 cagacggctg tacgcaccga gtccgacaat acgggcgata acttctttat agccgcccaa
    11341 ttcgctttcg ttggcggaaa cgatttcaac ctgccagcgg ttacgctcgg cgtagcgact
    11401 gtacatacgc agcaaatcac ctgcaaacag cgcggcttcg tcgccgcccg tgccggcgcg
    11461 tatttcgata aagatgtttt tgtcgtcgtc ggcatctttg ggcagcagca gtttttgcag
    11521 ttcggtatcg agcgtgttga ttttggcttt tgccgcttcg atttcttcgg cggcaaaatc
    11581 tttcatttcg gggtcggaca acatttcttc ggcatccgcc aagtcgcttt gggcaagccg
    11641 atagttttgg aacacttcga cgacgggggt cagttcggcg tgttcgcgcg tgagcttgcg
    11701 gtagttgtcc atatctgccg tggcttcggg ttgccctaaa aggtgggtaa cttcttccaa
    11761 ccggtcgccg agttgttgca gtttttctaa gatagacggc ttcataattc ttccataaca
    11821 aacgccgcct gaatttcaga cggcatcaaa acgcggtcat tataatatat tttctgaata
    11881 ttcaaaaaga taatctaggg acggagcagg ctgtcggcat tgcgttccgt tatcgcggcg
    11941 atgtccgcca cgccgacacc gcgtatctgc gcggcaattt cggcaatcca aagaatattg
    12001 gcaggcgtat taatctcttt tttcagcata aacgggctgt cggtttccaa tacgaaatcc
    12061 ccgtcgttca aggctttaag cgtatcgcgc actttacgcg cgttcggatt gagcaacaac
    12121 gaaccgatgc cgattttgaa acccagtttc gtcaacacgc gcgcttcttc cgcgctgcct
    12181 gagaaggcgt gaacgatgcc gccttgggca aagcctgtct gtttgacggc ggcggcgatg
    12241 tcggcggtgg ctttgagatt atggataatc acgcggcggc gcagggtttg cgcgatggca
    12301 agctggcgga cgaaaacttg gatttgccgt tcgcgctgcg gcggcgtttg ggttttgtcg
    12361 taaaaatcca aaccgatttc gccgacccat gcctgcggat aacgtgccaa catcgcttcc
    12421 aggcggacgc aatcacgctc ggcaatgccg tctgaaaacc aaggatggat gccgagcgca
    12481 atacggattt gaccgtgttc ggacggcatt tccgacagtt ccgccacgct ttgccaatcc
    12541 tgcgggcgcg tcgcgggaac gataaaccgc cacacacccg cctgtcgcgc ttcggcaagc
    12601 acctgcgcca gattgccgcg caaaacagaa tcggcaagat ggcaatgtgt gtcggtcagc
    12661 ctcatcttca caccagcccc aaccgctgca actcgtgttt cacctcgtcc gcgccccatc
    12721 cttcagaaac ggcaagcgtc atcaatgcgg ttgcggtttc caaattgcat ttgccgccgt
    12781 tgatgatgcc tgagttgcgg aacgcgttgc cttgcgcgta aacggcagcg gttctgcctt
    12841 gtcggacttg gctgatgttg agcagcagtt tgccttgctg cgtaaagtct tgcacggcgc
    12901 ggatgaaacc ttcgtctgcg ggcgtgttgc cgtgtccgta actttgcagg ataagggcgt
    12961 gggcgggaag ctgtccgagt ccgtcggcaa gttcttggac ggcaaagccg gggataagcg
    13021 tgcggacggc gatttttgcc tgcgggtcgg gataacggat tttgaggccg tctgaaacat
    13081 ctgccgcgtc ctgattcggg atgcggacat tgtgccagcc ctgggtttcg tcccactccg
    13141 ccagtgcgcc gaaatgcgga ttgtcgaaac cggcggcggt ttcggtgctg actttgctgc
    13201 tgccgacggc gggataaagt ttgccgtcaa aggcaataag cgtctgcttc aatccgagtg
    13261 ggaatgcggc aacggcagtc gccagattgc gcggcgcgtc gctgcccacg gcgttgtacg
    13321 gccattggga gccggtcagg acgattggct tgtccaaacc ctgcagggcg agggcgaaca
    13381 gattggcggt ataggcgagc gtgtccgtgc cgtgcagcac caaaacgccg tcgtactgcg
    13441 gcagcgcggc ggcaatgatg tccagccaag cgcaccagtt ttgcagttgg acggcggaag
    13501 aatcaatcag cgtcccacaa acgtgccaat cgaaatccat gccgtttgaa aacggcgcga
    13561 gtgcctgccc gaccagcgcg gtatcggggc gcaggccttc gctgctttgc gtcatgccga
    13621 tggtgccgcc ggtataaagg acaaaaattt tctgtttcat ggctcatcct gaaaatgcaa
    13681 agaccgcctg aaacgcgaaa tgcgtccgga cggtcgaaaa tctgatttac tgctgcttct
    13741 gtgccgcttt tttcgctgcc ttttccgcct tgcgtttggc gcgtttttcg ctcaattgtg
    13801 cgcggtaaag ctgataatgt cggcgtttgc gccaccagaa ccacgccagc gccgccgcca
    13861 gcacgcccaa tgcgatgaag atgccggatt gcaggctgtg cattttcgcc atcagccaat
    13921 cgatgttgtg cgcgccgtac tcgcccaagt aaatccaaac gggcacggaa atcagcgcgg
    13981 caagcccgtc cataatcaga aagcgcagat acgatacttt gcggctgatg ccggcggtaa
    14041 cgaaaacggc agtccgcaaa cccggcagga agcgggcgac aaacagaacc cagttgccgt
    14101 atttgtcgaa tttttcctga acctgtgcgt aacgtttcgg cgtcatgatg cgcgcaatcg
    14161 gtttgaactt gaggattttc tgcccccaga tgcgtccggc ggcgaacatg atgccgtccc
    14221 cgaccaatac gccgagcata ccgactgcaa acataatatg cggattggta taacccatac
    14281 ccgaaatcac gccgcctgtt accaaggtca aatcctcggg aatcggcacg ccgaaaccgc
    14341 agatgaccaa aacgaaaaac acggccgcgt agccgtattc gacaaaaaag gcttccaaaa
    14401 gggcaaacat agcggatatt ccattgtcgg agataaaaag tcagaacaag ccgaaacatt
    14461 ttctgcgcga aacggcattc tatcaaagat tatgccgtct gaaagcggca gggggcagat
    14521 tcgcgccctc tgccggacgt tcagacggca tttaaacagg aaaaccgccg ctgttgaaac
    14581 ggttttgcct gattttgcct aaaggctgcc gatggcggaa gcaatacgtt ccgcaccgtc
    14641 gcgcgcccaa tccgcctgcc gcgcctccac catcacgcgc acgacgggtt cggttcccga
    14701 agcgcgcaac acgacacgcc ctttgccttc gagttctttt tccacttccg ccaacacgtc
    14761 ttttgaggct tcctgccagt tttgcccttt gccgatacgg acattaatca tcgtttgcgg
    14821 atacggctgc cagtcggcgc aaacggcggc aaggtcttgg ttcagcgttt gcaatgccgc
    14881 caaaacctgc aaggcggaaa taatgccgtc gccggtgttg tgtttgtcca tgcacaaaat
    14941 atggccgctg gcttcgccgc cgacgagcca gccgcgttgg ttcagctgtt ccaacacata
    15001 gcggtcgccg actttggcgc ggcagaaatc cacgccctgc tctttcaggg cgatttccat
    15061 cgccatattg gtcatgaccg tgccgaccac gccgccgatg ttgatacctt ctcgggcgcg
    15121 ggctttagca atgacgtaaa tcaggctgtc gccgtcgtaa accttaccgt ttttatcgac
    15181 catcatcagg cggtcgccgt cgccgtctaa ggcgatgccg tagtcggctt catgctgtaa
    15241 aacggcggcc tggagtgtct tggtataagt cgcaccgcat ttttcgttga tgttgtagcc
    15301 gttgggttcg tcgccgatgc tgacgacctg tgcacccagt tcgtgaaaca ccttgggtgc
    15361 gacaccgtac cccgcgccgt tggcggtatc gataaccaac ttcaaaccac gaaggtcgga
    15421 atggctggga aaggtggatt tgcaaaattc gatatagcgg tcgtccgcac cgctgatacg
    15481 gcgtgcgcgc ccgaggcgtg cagaaggctg ggttttcatt tcttcgtcga ttttggcttc
    15541 gatttccaac tcgatttcat cggaaagctt cacgccaccc tcggcaaaga atttgatgcc
    15601 gttgtcggaa taggcattat gcgacgcgga aatcatcaca ccggcggaca aacgcagcgc
    15661 acgggtcaga taagccacgc cgggcgtagg cagcggaccg gtttggataa cgttgacacc
    15721 tgcggcggta aaacctgcca ccaaagcggc ttccagcata taaccggaaa tacgcgtatc
    15781 cttgccgatt aaaacggtcg gtttctggtc agtgtcgtgc tgaaccaaaa cctgccccgc
    15841 cgcatagccg agtttcaata caaaatcggg cgtaatcgga aactgcccga cttcgccgcg
    15901 cacgccgtcc gtgccgaaat atttttttgc catgtgttgc tccgagaatg tgaaccgttg
    15961 tccgagatta tacagtctgt ttgtgccctg ctgtctgcac cgttgatgcc gtctgaagcc
    16021 gccccgtcct tttcagacgg catgaagtat gcgaaccgct gtttacagat tgatgcccaa
    16081 cgcttcccac accttcaacg cgtccgccgt cgccttcacg tcatgcaccc gcacaatttg
    16141 cgcgccgcgc gccacagccg ccacagccgc cgccacgctg ccgtgtacgc gcgccgccgc
    16201 gtctgcctcg ccagtcagct cgcctatcat acgtttgcgc gacacgccga tgagcagcgg
    16261 aaaacccgtt tccgccatca attcgggtaa atgccgcatc agtgcgatat tgtgttgtaa
    16321 ggttttgccg aaaccgaaac cggggtcgag tgtgatgcgt tgcggggcga tgcctgccgc
    16381 gatgcattcc gccgcccgcg ctttcaaata ccgcgccact tcaccaacaa catcctgata
    16441 tttcggatta atctgcatgg tttcaggcaa accctgcata tgcatcaggc aaatacccgt
    16501 gtccgtctgg cgcgccagca attcgaccgc gccttcgtcg gtcaacgccg ccacatcgtt
    16561 aataatatcg atgccgccga gtgccaacgc tttttccata accaccgtgc ggcgcgtgtc
    16621 caaactgacg ggaacgcccc atcccgcgac ttctaccaat acaggctcaa cccgcgccca
    16681 ttcttcttcg gacgaaacat aatccgcacc cggccgcgtc gattcgccgc caatgtcgag
    16741 aatgtccgca ccctctttca aaagccgttc ggcgtgcgcc aaagcggttt tggcattttg
    16801 cgaatacgcg ccgccgtcgg aaaaagaatc aggcgtgaga ttcacgatgc ccataatttt
    16861 cggcttgtcc aaaccgattt caaaccgtcc tgcctgccaa ccgtgtcgtg ccatctgaac
    16921 tcctcccaaa ataaaaaaac agattgagac ctttgcaaaa atagtctgtt aacgaaattt
    16981 gacgcataaa aatgcgccaa aaaattttca attgcctaaa accttcctaa tattgagcaa
    17041 aaagtaggaa aaatcagaaa agttttgcat tttgaaaatg agattgagca taaaatttta
    17101 gtaacctatg ttattgcaaa ggtctcagat tatatgccgt ctgaaaccgt cttgtgcgct
    17161 tcagacggca ccgctattcg ggcggcagac ggcatgttgt ccgaatgtct gctccgcctt
    17221 tgaatctgcc ggtatgcctg ctatccgccc gacttttcaa aacaggttcc gacgattccg
    17281 cacgcgcctg ccgcctttgc caagccgtac aggatttcct gcggcatatc gcggttccat
    17341 aatcccgtaa tattcgcaat cacgggcaga tggctgattt ggcggacttt cacgatggat
    17401 tcgacatcca aacggtaggg atggtctttg gtatggctca acacgcccga ctcgcccaga
    17461 atcaggtggc ggttgccgcg cgagacgaca tattctgcgg cattcaacca atcttcggca
    17521 gaatggtgct tgtctttaca cagcaccaag ggaatgttca ggcttccggc ttcattcaat
    17581 acggcaagat cggacatcag cccgccgccc aaatacagga tgtccgcccc cgcattcaaa
    17641 gccgcttcga catggcggac gttgcggacg cgcaccaata cgggtttccc tgcgccatgc
    17701 gccgatgcgg tctgttccgc caaccgtctg caccgtcctc gcccttcatc cgcacttgaa
    17761 gtgtcgtata agtttgccga agtgaaaaac ggatccagaa acactgcatc cgcattgcgc
    17821 catactgacg gttctgcggc gatacagacg gtttccccgc cgccgaaagc cacgcctttg
    17881 gcggcaacgc ggctgtcttc cgcccgattt tcccgactga cggttttcca tgtatccaaa
    17941 atgcggacgg ctttctcgac ctccggcagc gtctgcacct ccctgacgct caaaacccta
    18001 tcgtcgccga ttgcgccgat gacggtacgc tcgtcgccgt gagaaatgtg ttctcgcaga
    18061 cctctgctgc ggataaaggc gacaacgccg gcaatgtccg cttcggcggc acgcctgctc
    18121 atgacaataa tcatatttcc tcctgacaca agaaacggcc tgcccaaaat aggatttttg
    18181 caagccgtgt tatactgtgg cgtgttttac agattgttcg ggctatggat ttattatcgg
    18241 ttttccacaa ataccgtctg aaatatgcgg tggccgtgct gacgatactg cttttggcgg
    18301 cagtcgggct gcacgcttcc gtatatcgca ccttcacgcc tgaaaacatc cgcagccgcc
    18361 tccaacaaag cattgcacac acacaccgga aaatctcgtt tgatgcggac attcagcgca
    18421 ggctcctgcc ccggccgacc gtcatcctga aaaacctgac cattaccgaa cccggcggcg
    18481 accagactgc cgtttccgtc caagaaacca aaatcggatt gagctggaaa aacctgtggt
    18541 cggatcagat acagattgaa aaatgggtgg tttcgagtgc ggaacttgcc ctgacgcgcg
    18601 acgggaaagg tgtttggaac atccaagacc tgatcgacag ccaaaaacgc caagcctcag
    18661 tcaaccgcat tatcgtcgaa aacagcaccg tccgcctcaa tttcctgcag gaacagctta
    18721 tcctgaagga aatcaacctc aacctgcaat cccccgattc gtcggggcag ccgtttgaaa
    18781 gttcgggcat actggtttgg ggaaagctgt ccgtcccgtg gaaaagcagg gggctgttcc
    18841 tttcagacgg catcggcacg cccaaaatct caccgttcca ttttgaagct tccacttcgc
    18901 tggacggaca cggcattacc atttccacca ccggcagccc ttctgtccgc ttcaacgccg
    18961 gcggagcgga tgccgccggc ctcggcctgc gtgcagacac ttccttccgc aacctccacc
    19021 tgaccgccca aatccctacg ctggcactca gaaataacag cattaaaatt gaaaccgtca
    19081 acggcgcatt taccgccggc ggcgaatatg cccaatggga cggttcgttc aaactcgaca
    19141 aagccaacct tcactccggc atcgccaaca tcggcaacgc cgaaatctcc ggcagcttca
    19201 aaacaccgcg ccaccagacc aacttctccc tcaattcgcc gctcgtatgg acggaaaaca
    19261 aagggctgga cgcgccgcgc ctgtatgtat cgacccttca ggataccgtc aaccgcctgc
    19321 cgcaaccccg tttcatcagc cggctcgacg gttcgctgtc cgtaccgaat ctgcaaaatt
    19381 ggaatgccga attaaacggc acattcgacc gccaaaccgt tgccgcgaaa ttcagataca
    19441 cacatgaaga cgcaccgcat ctggaagccg ccgtcgcact gcaaaaattg aacctgaccc
    19501 cctatcttga cgacgtgcgg caacaaaacg gcaaaatatt tcccgacacc ctcgccaagc
    19561 tgtccggcga catcgaggcg cacctgaaaa tcggaaaagt ccaacttccc ggcctgcaac
    19621 tggacgatat ggaaacctac ctccacgccg acaaaggcca tatcgcgctc agccgtttca
    19681 agtcagggct ttacggcggc cataccgaag gcggcatcag catcgccaac acccgtcccg
    19741 ccacttaccg cctgcaacag aatgcaagca acatccaaat ccaaccgctg ctgcaagacc
    19801 tgttcggctt ccacagcttc agcggcaacg gcgatgcggt catcgacctg accgcgagcg
    19861 gcgaaacccg aaaagagctt atccgctcgc ttcagggcag cctgtcgctg aatatttcca
    19921 acggtgcatg gcacggtatc gacatggaca atatcctgaa aaacggcatt tcgggcaaaa
    19981 ctgccgacaa tgccgcaccc agcacaccct tccaccgatt cacgctcaac agcgaaattt
    20041 cagacggcat cagccgccac atcgataccg aactcttctc cgacagcctc tatgttacca
    20101 gcaacggcta taccaatctg gatacgcagg aattgtctga agatgtcctt atccgcaacg
    20161 ccgtccatcc gaaaaacaaa ccgattcccc tgaaaatcac cggtacggtg gacaagccgt
    20221 ccattaccgt cgattacggc aggctgaccg gcggcatcaa ttcgcgcaaa gagaaacaga
    20281 aaatcctcga agacaccctg ctggaacaat ggcagtggct caaacctaaa gaaccgtaaa
    20341 catcctgcgt acaaaaatgc cgtctgaaac gcccccgcgc ttcagacggc agaccgtaaa
    20401 acctacaacc ccaattcctc ccaaatccca tcaatcttag ccgtaaccgc agggtctttt
    20461 ttgatgacgc gtccccattc gcggtcggtt tctcccggcc atttgttggt tgcgtccaag
    20521 cccattttgc cgccgagtcc gctgaccggg ctggcgaagt cgagatagtc gatgggcgtg
    20581 ttttccacca aaacggtgtc gcgcacgggg tccatgcgcg tggttaccgc ccagatgact
    20641 tctttccagt cgcgcacgtt cacatcgtca tccaccacga tgatgaattt ggtgtacata
    20701 aactggcgca ggaacgacca gcagcccatc atcacgcgct tggcgtgtcc ggcgtactgt
    20761 tttttcatgc tcaccaccgc catgcggtag gagcagcctt cgggcggcag gtaaaaatcg
    20821 gtgatttcgg ggaactgctt ttgcaagagc ggtacgaaca cttcgttcaa cgccacgccc
    20881 aaaacggcag gctcatcggg cggtttgcct gtgtaggtcg aatggtaaat cgggttttcg
    20941 cgcatggtga tgcgttcgac cgtaaacaca gggaaataat cctgctcgtt gtaatagccc
    21001 gtgtggtcgc cgtacgggcc ttccaacgcg gtttcgttcg gatgaatcac accttccagc
    21061 acgatttctg cgcgtgcagg cacttgcaaa tcgttgccga tacatttcac cagctccgtc
    21121 cgcgaaccgc gcagcagtcc ggcaaactgg tattcgctca aggtatcggg aacgggcgtt
    21181 accgcgccca aaatggtggc agggtcgcag ccgagcacga cggcgacggg atacggcgta
    21241 tcgggattga gtttgcggaa ttcctgataa tccaacgcgc cgccgcgatg cgacagccag
    21301 cgcataatca gcttgttttt gccgatgagt tgttggcggt aaatgccgag attttggcgt
    21361 tttttgtgcg gcccgcgcgt tacggtcaag ccccatgtta ccagcggcgc aacgtcttcc
    21421 ggccagcaat gctgaatcgg aagtttatac aaatcaacgt tttcgccttc ccacacgatt
    21481 tcctgacacg gcgcgttttt caccacgttc ggcgccatgc tccaaatgtc tttcagtagc
    21541 ggcagtttgg aaaacgcatc tttgatgcct ttgggcggtt cgggttcttt caaatacgcc
    21601 agcgtctgcc cgatttcacg cagcttggac acgctgtccg cgcccatgcc catcgccaca
    21661 cgttcgggcg tgccgaacag gtttgccaac acaggataac cgtagcgcgt accgtcgggc
    21721 ttaaccgggt tttcaaacag caacgccggc ccttcggcgc gcagcacgcg gtcggcgatt
    21781 tcggtcattt ccaaatgcgg ggaaacgggg tgcgcgatgc gtttgagttt gccctgctgc
    21841 tcgagcatgg cgatgaagtc gcgcaggtct ttgtatttca tattcatcct ttttgtcctt
    21901 ttatcctgag caatccgatt cggataccgc ccctatcctt gcctgtgcct cggcatattc
    21961 tatgccgtga taaaagtcgc gtaccagcgg atgttcgctg ccttgatgga gttgcagcaa
    22021 agggcgttga ccatcgggtt gggtaacgac attgcaatgc ataccgaagg tgtcggattc
    22081 gtaagggggc agccggttgc agatcatccc gaaataaacg acattttccg gattgtcgtg
    22141 aaagtggctt tgatagtcgt taaaactctt ttcgctgacg gacacccaca cgccatattc
    22201 cagcgtttcc tcatgcccga taatcggaat cggcagcacc gcgcggataa agcggtcggt
    22261 ttggtcggga tagcggatga tgcagaaatc agaatcgcat tctgcttgat aagcaatgcg
    22321 ttcttcttca ctgagttgat tatagggatc gggggcggta aagccgattg cgggcatatc
    22381 ttcatgtttt tcgccgcagg aagtgcaagt gtacataagg tttcagactt tcaaaacgag
    22441 tttgcggtaa agccattcgc cggcaaacag catccccatc aatacatagg caatcacgcc
    22501 tgtataaacc gcccaccaat catatcgccc caaccgtgcc aacaaagcgg caagcgtccc
    22561 gttgattata aaaaatacgc accaaacctg cgttacccgg cgggtatagc gcacggcttt
    22621 ttcaggcagg tcgggctgtt gcagccgcgc aagtttttca atcaccgtct gccctgcaaa
    22681 caggctgccg ccgaacaccg ccaacatcat cagattgacg aggacgggat accaatacat
    22741 cgaatcatgc cgcccgaaca ccaatactgc ggcaaaaaac agtgtaataa acaaagccgc
    22801 ataacgctgt tggggcagtt tggcagtcag ggcgcgcagc agccacaacc cgcacatcgc
    22861 cgccgccagc cagacaaacc agcccgcctc cctgccgtaa tatagtggat taacaaaaac
    22921 cagtacagcg ttgcctcgcc ttgccgtact gtctgcggct tcgtcgcctt gtcctgattt
    22981 ttgttaatcc actataccac aaagcgggat aggcaatgct taatacggtc agaaaaatat
    23041 gtccgaaaaa accgggtttc attttgaatc cgcacaaatg ttttcagacg gcatccgata
    23101 aaaacatgcc gtctgaaaaa taattagaaa tacccgatta gcccgcctga atcttcaata
    23161 ccgcctgtac cacgtcgttg acggtgcgga cattgcggaa atcttcagcc tgcagcttgc
    23221 gggctgccac agccattcac gattgcgata tacccggcgg cattcccgac tgccgttcag
    23281 cagaaagcgc acccattcca aaccgctcca atatgcctcg ggcagcatac cggcttcaga
    23341 cggcatatcg tccgaagcag ataaagtcag actgtaacgc gtccctttgg tcagaaccat
    23401 cgccaaagca taagcaaacg gcgcgcgcgt tgccgatacg gcatatcctt ccggcagcgg
    23461 atcgtccgcc gccaaaacca aaaccgaccc gcatccctct tccaacagtg atgccgcttc
    23521 cgccaatgcc gtttccacac cgtcggcaca cacggccaat gccgtctgct cgctcatatc
    23581 ccgcctcaat atcgaccatt accccgccgt tgcattgtgc accgacaaac cgaacgaagt
    23641 cggcgacacg atttgcgatt tcaacagttc caaccacaaa tcgaaactgc gcgccatttc
    23701 cccgtcgtgc gaggcataaa ctatagtgga ttaaatttta ggggctgtac tagattagca
    23761 gatatgttac cctcgaaata tgaagataac gcactgcaaa tgaaagaaaa aagtacagaa
    23821 agaactgctc cgtttttttg tactcgaagt taccgcccgt tctgccgccg atattttggg
    23881 tatccatccc aattcggcag cactgttcta ccgtaaaatc cgcatggtta tcaaccatca
    23941 tttggccttg gctgccgatg aggtttttga gggc
//
LOCUS       DBBZXU010000019        22727 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.019, whole genome shotgun sequence.
ACCESSION   DBBZXU010000019 DBBZXU010000000
VERSION     DBBZXU010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22727
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.019"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..199)
                     /locus_tag="ACJJDE_000654"
     CDS             complement(<1..199)
                     /locus_tag="ACJJDE_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540624.1"
                     /translation="MKKSLIALCVAHCAKLKNDFGVPPLPEIKITPSPVRVGSLKQHP
                     SLRLGKSGVAAAKRAARKRKNR"
     gene            complement(196..741)
                     /locus_tag="ACJJDE_000655"
     CDS             complement(196..741)
                     /locus_tag="ACJJDE_000655"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7540625.1"
                     /translation="MSKIICLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAANKTATGIEALSTPKNKRWCQ
                     VLGKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGATKV"
     gene            complement(884..1405)
                     /locus_tag="ACJJDE_000656"
     CDS             complement(884..1405)
                     /locus_tag="ACJJDE_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540626.1"
                     /translation="MECHADVWHFILEKNMKKFYFVLLALGLAACGQEQSQKADAEQY
                     FFANKYQFADEKQAFYFERAARFRVLQQGLGGDFERFLKGEIPNQENLAKYRENITQA
                     VAYYADTNGDDDPYRVCKQAAQDAEILMKSMVTSGGGGTTDLDKESYQNYRKSMQECR
                     KTITEAEANLPKK"
     gene            complement(1407..1847)
                     /locus_tag="ACJJDE_000657"
     CDS             complement(1407..1847)
                     /locus_tag="ACJJDE_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HGG7540627.1"
                     /translation="MAKAALPDAVKHLLPDSVQALITVIGFNETLELVRLMGGTTYPL
                     RQGYTKNSQSRVAYLEEIIGSEAAGRLVEAMAPCNLFIPRCETALYELRNRKIRSQFD
                     RQTAGGTPAYEAVNDLALAHRLSDRHVWRILKQADKEAEQENLF"
     gene            complement(1821..2579)
                     /locus_tag="ACJJDE_000658"
                     /pseudo
     CDS             complement(1821..2579)
                     /locus_tag="ACJJDE_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241524.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
     gene            2625..2882
                     /locus_tag="ACJJDE_000659"
     CDS             2625..2882
                     /locus_tag="ACJJDE_000659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HGG7540628.1"
                     /translation="MKEFPDLEKRLIMLEVAVQDLEERSLTDSFVLAWLLQRITRQEP
                     TSIEQVRSFLQAQAKTFEPDSVQREHLESLLEIVESAQGLA"
     gene            complement(2949..4937)
                     /locus_tag="ACJJDE_000660"
     CDS             complement(2949..4937)
                     /locus_tag="ACJJDE_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mu transposase C-terminal domain-containing
                     protein"
                     /protein_id="HGG7540629.1"
                     /translation="MKISASDIAKLGIPSLPTDRQGIEYHAKKNNWQHCFEQKGRGRP
                     KKLYEIASLPAEIRAAIMKRQSDELAEKMPKMLPQVRPGTAMSAQALAEAAKLLNEKQ
                     RSVADARCAVVAAVLGIKYEYDCSAKAAVAQFLGLLAEGKLDAVTLGNLEKANDRSRS
                     AKVGERTLDGWISAYLKAENAIERLVALAPKTTKAVKPIESYGWLPMFMRFHNIPSAP
                     KLAHSYRRFVQWAEAENMPVNDVPNLSMVRRVWDKLPLIMQERGRKTGAAYKSLLPYV
                     KRDWGALKPNDVWIGDGHSFKAKVAHPVHGRPFKPEVTVIIDGCTRFVVGFSVSLAES
                     CVAVSDALRIGVKHFGLPIIYYSDNGGGQTGKTIDHEITGITSRLGIRHETGIAGNPQ
                     GRGIIERWWKDNLIEMARQYETFAGAGMDSSTKNLMYRKMESAFNALEKGKDLTEEQQ
                     KYLKKLPSWSRFIADVVKCIDDYNNRPHGELPRHPDGGHYSPKAYREIRLEQDGIAPD
                     MLSAEELATMFMPQEVRKVQRGWLDLFSNSYFSTELAEYHKDEVRVSYDLSDASAVNV
                     FDMDGKFITKAQANGNTREAFPTARIDQLAEKRRKGKIKRAENAIKLANAEVNPALEQ
                     AAAWDELGHLGGNVIEAEYAVLPKTGTDDGIFLFEADM"
     gene            complement(5059..5262)
                     /locus_tag="ACJJDE_000661"
     CDS             complement(5059..5262)
                     /locus_tag="ACJJDE_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HGG7540630.1"
                     /translation="MKKKQESMTDWHRADIVARLKKAGWSVRALSIEANLAPNTLGKA
                     LDAPYLKGERIIAAAIGVPAEEI"
     gene            5484..6201
                     /locus_tag="ACJJDE_000662"
                     /pseudo
     CDS             5484..6201
                     /locus_tag="ACJJDE_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173203.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
     gene            6411..7001
                     /locus_tag="ACJJDE_000663"
                     /pseudo
     CDS             6411..7001
                     /locus_tag="ACJJDE_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707572.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            7106..7774
                     /gene="hda"
                     /locus_tag="ACJJDE_000664"
     CDS             7106..7774
                     /gene="hda"
                     /locus_tag="ACJJDE_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA regulatory inactivator Hda"
                     /protein_id="HGG7540631.1"
                     /translation="MNQLIFDFAAHDYPSFDKFLGTENAELVYVLRHKHGQFIYVWGE
                     EGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEYLAVDQVEKLGNEEQAL
                     LFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCLVYEVKPLTDQEKIDALA
                     SMAAARQVTVDSEIFEYLLKHWRRDMDSLMMMLDTLDNYAVTMGKRITLPLLRQLLKQ
                     QETQ"
     gene            7771..8439
                     /locus_tag="ACJJDE_000665"
     CDS             7771..8439
                     /locus_tag="ACJJDE_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7540632.1"
                     /translation="MKNLAIFDLDNTLINTDSDHAWPQYLIKKGLVDAAETEAQNEKF
                     YRDYQNGCLDIDAFLKFHLAPLARYSKEELAEFHREFMAEYIIPHISPMQRMLVQSHQ
                     MAGDETLVISSTNEFIITPVCRLFGITNIIGTQLESGSDGRYTGNYIGTPSLKEGKIT
                     RLNQWLAERGETLESYGKTYFYSDSKNDLPLLRLVDEPVAVNPDAELEKEAKEKGWPV
                     LNFK"
     gene            complement(9937..10833)
                     /gene="argB"
                     /locus_tag="ACJJDE_000666"
     CDS             complement(9937..10833)
                     /gene="argB"
                     /locus_tag="ACJJDE_000666"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HGG7540633.1"
                     /translation="MESENIISAADKARILAEALPYIRRFSGSVAVIKYGGNAMTEPA
                     LKEGFARDVVLLKLVGIHPVIVHGGGPQINAMLEKVGKKGEFVQGMRVTDKEAMDIVE
                     MVLGGHVNKEIVSMINTYGGHAVGVSGRDDHFIKAKKLLIDTPEQNGVDIGQVGTVES
                     IDTGLVKGLIERGCIPVVAPVGVGEKGEAFNINADLVAGKLAEELNAEKLLMMTNIAG
                     VMDKTGNLLTKLTPKRIDELIADGTLYGGMLPKIASAVEAAVNGVKATHIIDGRLPNA
                     LLLEIFTDAGIGSMILGGGEDA"
     gene            11003..12133
                     /locus_tag="ACJJDE_000667"
     CDS             11003..12133
                     /locus_tag="ACJJDE_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M14-type cytosolic carboxypeptidase"
                     /protein_id="HGG7540634.1"
                     /translation="MIKISTRFDAGSVVVKDLTDPSNIRLALRPDNASDFAQWFYFRL
                     QGAAYQNCIMHFENAAEAAYPKGWEGYQACASYDRRNWFRVPTSYENGVLTVNHTPLS
                     NSVYYAYFEPYSEEQHLNLLGDAQGSGLCRIDDLGSTVQGRDINLLTIGNQVESDLKI
                     WITARQHPGETMAEWFVEGLLGRLLDPQDPTARTLLDRATFYIVPNMNPDGSALGNLR
                     TNAAGANLNREWENPTLEKSPEVFFVREKMLETGVDLFLDIHGDEGLPFIFVAGTEGV
                     PNYNPRISALETQFKTALLNASPDFQDEYGYEKDAPGQANMTLATNWVGNRFNCLAYT
                     LEMPFKDNANLPDDDFGWNGQRSLRLGEAALSAILNIIGDLR"
     gene            12204..13055
                     /gene="lgt"
                     /locus_tag="ACJJDE_000668"
     CDS             12204..13055
                     /gene="lgt"
                     /locus_tag="ACJJDE_000668"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HGG7540635.1"
                     /translation="MITHPQFDPVLISIGPLAVRWYALSYILGFILFTFLGRRRIAQG
                     LSVFTKESLDDFLTWGILGVILGGRLGYVLFYKFSDYLAHPLDIFKVWEGGMSFHGGF
                     LGVVIAIWLFGRKHGIGFLKLMDTVAPLVPLGLASGRIGNFINGELWGRVTDINAFWA
                     MGFPQARYEDAEAAAHNPLWAEWLQQYGMLPRHPSQLYQFALEGICLFAVVWLFSKKQ
                     RPTGQVASLFLGGYGIFRFIAEFARQPDDYLGLLTLGLSMGQWLSVPMIVLGIVGFVR
                     FGMKKQH"
     gene            complement(13138..13800)
                     /locus_tag="ACJJDE_000669"
     CDS             complement(13138..13800)
                     /locus_tag="ACJJDE_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein"
                     /protein_id="HGG7540636.1"
                     /translation="MDSQKFTEASKRRLSELLDAKSEQGNTMRCDEVQGFMTALLSGP
                     DKLTPLDWLPEVLGDESQFTAAERSEIERLVLAMAMETTAAMSDKKLPDLWLYENEDG
                     GSDFYTWCNAYLYGLDIVPTDWFEAVDDEAFEELFYPIMALGGIYDEEDNGTIRLQFT
                     EGELAELESELPYALADIYRYWQAVINKPQTVRREGEKTGRNDPCPCGSGRKYKACCG
                     KN"
     gene            complement(13898..15691)
                     /locus_tag="ACJJDE_000670"
     CDS             complement(13898..15691)
                     /locus_tag="ACJJDE_000670"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003852 - 2-isopropylmalate synthase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HGG7540637.1"
                     /translation="MQLDIDRLVAYFGGVNALAEALKRHDPENAATTAAIYKWRTRGS
                     LPLAQLQKLTALAESQGRPLDLNAFLQKNESLERTEMTQANRVIIFDTTLRDGEQSPG
                     AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIE
                     RDIRQAGEAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDV
                     EFSCEDALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNG
                     GKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLGERAGNASVEEIVMALKVRH
                     DLFGLETGIDTTQIVPSSKLVSTITGYPVQPNKAIVGANAFSHESGIHQDGVLKHRET
                     YEIMSAESVGWSANRLSLGKLSGRNAFKTKLADLGIELESEEALNAAFARFKELADKK
                     REIFDEDLHALVSDEMGNMNTESYKFISQKISTETGEEPRADIVFSIKGEEKRASATG
                     SGPVDAIFKAIESVAQSGATLQIYSVNAVTQGTESQGETSVRLARGNRVVNGQGADTD
                     VLVATAKAYLSALSKLEFSAAKPKAQGSGTI"
     gene            15930..17039
                     /gene="proB"
                     /locus_tag="ACJJDE_000671"
     CDS             15930..17039
                     /gene="proB"
                     /locus_tag="ACJJDE_000671"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HGG7540638.1"
                     /translation="MKYKRIVFKVGTSSITHSDGSLSRGKIQTITRQLAALHHAGHEL
                     VLVSSGAVAAGFGALGFKKRPAKIADKQASAAVGQGLLMEEYTANLSSDGIVSAQILL
                     NRTDFADKRRYQNAGGALSVLLQRRAIPIINENDTVSVEELKIGDNDTLSAQVAAMIQ
                     ADLLVLLTDIDGLYTGNPNSNPDAVRLDRIEHINHEIIEMAGGAGSSNGTGGMLTKIK
                     AATIATESGVPVYICSSLKPDALAEAADNQADGSFFVPRAKGLRTQKQWLAFYSESRG
                     GVYVDEGAEHALSEQGKSLLMSGVAGIEGHFSRMDTVTVYSNATKQPLGKGRVLFGSA
                     AAEDLLKSRKAKGVFIHRDDWISITPEIRLLLTEF"
     gene            17052..18314
                     /locus_tag="ACJJDE_000672"
     CDS             17052..18314
                     /locus_tag="ACJJDE_000672"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HGG7540639.1"
                     /translation="MSNTQKQLALAKAAKKSVNTADTEEKNRALLAMADSLEAAAADI
                     LAANRLDLEAAAGKIPESMTDRLLLDGKRICAMADGIRAVAALPDPVGEILETSTLPN
                     GLEIVKKRVAMGVIGIIYESRPNVTSDAAALALKSGSAVVLRSGKDAFQSARAIVAAL
                     KAGLAQTRIDPDALQLIEDTGREGSYEMMRAKDYLDLLIPRGGAGLIRAVVENAVVPV
                     IETGTGIVHIYIDKDADWDKALRIVYNAKTSRPSVCNSMEVLLVHEDIAADFLPKLER
                     LLVRDRIKAGLPPVRFRLDPQAARHIGGEAAGADDFDTEFLDYILAVKTVASVEEAVG
                     HIETHGTHHSDGIVTENRHAADYFTTHIDSAAVYVNASTRFTDGGEFGLGCEMGISTQ
                     KLHARGPMGLKELTSYKYIIRGVGQVRE"
     gene            complement(18386..21418)
                     /locus_tag="ACJJDE_000673"
     CDS             complement(18386..21418)
                     /locus_tag="ACJJDE_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HGG7540640.1"
                     /translation="MFWIVLIVILLLALAGLFFVRAQSEREWMREVSAWQEKKGEKQA
                     ELPEIKDGMPDFPELALMLFHAVKTAVYWLFVGVVRFCRNYLAHESEPDRPVPPASAN
                     RADVPTASDGYSDSGNGTEEAETEEAEAAEEEAADTEDIATAVIDNRRIPFDRSIAEG
                     LMPSESEISPVRPVFKEITLEEATRALNSAALRETKKRYIDAFEKNETAVPKVRVSDT
                     PMEGLQIIGLDDPVLQRTYSRMFDADKEAFSESADYGFEPYFEKQHPSAFSAVKAENA
                     RNAPFRRHAGQAEAKSPDVSQGQSVSDGTAVRDACRRVSVNLKEPNKATVSAEARISR
                     LIPESRTVVGKRDVEMPSETENVFTETVSSVGYGGPVYDEAADIYIEEPAAPDAWVVE
                     PPEVPKVPMPAIDIPPPPPVSEIYNRTYEPPTGFEQAQRSRIAETDHLADDVLNGGWQ
                     EETAAIADDGSEGAAERSNGQYLSETEAFGHDSQAVCPFENVPSERPSCRVSDTEADE
                     GAFPSEETGAVSEHLPTTDLLLPPLFNPEATQTEEELLENSITIEEKLAEFKVKVKVV
                     DSYSGPVITRYEIEPDVGVRGNSVLNLEKDLARSLGVASIRVVETILGKTCMGLELPN
                     PKRQMIRLSEIFNSPEFAESKSKLTLALGQDITGQPVVTDLGKAPHLLVAGTTGSGKS
                     VGVNAMILSMLFKAAPEDVRMIMIDPKMLELSIYEGIPHLLAPVVTDMKLAANALNWC
                     VNEMEKRYRLMSFMGVRNLAGFNQKIAEAAARGEKIGNPFSLTPDDPEPLEKLPFIVV
                     VVDEFADLMMTAGKKIEELIARLAQKARAAGIHLILATQRPSVDVITGLIKANIPTRI
                     AFQVSSKIDSRTILDQMGAENLLGQGDMLFLPPGTAYPQRVHGAFASDEEVHRVVEYL
                     KQFGEPDYVDDILSGGGSEELPGIGRSGDGETDPMYDEAVSVVLKTRKASISGVQRAL
                     RIGYNRAARLIDQMEAEGIVSAPEHNGNRTILVPLDNA"
     gene            21583..22263
                     /locus_tag="ACJJDE_000674"
     CDS             21583..22263
                     /locus_tag="ACJJDE_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000041 - transition metal ion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HGG7540641.1"
                     /translation="MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLARYRSALPL
                     CTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALMVGTSAAFWLAALLMLPYCLLFA
                     GSAGAYPPNALVLILPALAVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
                     TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYL
                     KSDRGIWR"
     gene            22292..22651
                     /locus_tag="ACJJDE_000675"
     CDS             22292..22651
                     /locus_tag="ACJJDE_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HGG7540642.1"
                     /translation="MLSNIIPLSIGAALGATARWLLNLAVPAAMSPATGNLFANWTGA
                     LLIGIFAETINHPQWKLLLITGFLGSLTTLSGFSLETVTLLQSNRPASALANIFLHTA
                     GSLLLTWLGLKIGAAVK"
BASE COUNT         5303 a         6413 c         5391 g         5620 t
ORIGIN      
        1 gacgattctt gcgtttgcgc gccgcacgtt tcgcggctgc cacgcctgat ttacccaagc
       61 gcaggctcgg atgttgtttc aaagagccta cccgaacagg gcttggcgtg attttgattt
      121 caggtaacgg tggtacgcca aaatcgtttt tcaactttgc acaatgggca acacataaag
      181 caatcaaaga ctttttcata ccttcgtcgc tcccaattcc atcgcgatcg cgtccgcaat
      241 cgcgcggcag atgccccatt tggtcgtctt aaacaaggcc aaatcagtgt cgttactgat
      301 aaaaaacggc tcaaacacaa tgccgcctgc ctgcgcataa gccaggcgcg aatgttgccc
      361 tgcgttatcc ggcttaaagc cgtcttcgcc gcgcagtttc cagccggttt tcttggcaac
      421 ggctttgccc agcacctgac accagcgttt atttttcggc gtggacaagg cttcgatgcc
      481 tgtcgccgtt ttgttcgccg ccgcattggt gtggaactca atcgccacat ccgagccgcg
      541 aatcagcttg accgcatcgc gcaagggcat attgcctttg ccttcgccgt cggtgcgtac
      601 ggtcaggccg taatcgttac gcaggattga agccacaatg ttgcgcatat cctgcgccaa
      661 gtccgcctca cggtcgctgc cgttgactgc gcccgggtcg gtgttactgt gtccggcagt
      721 cagacaaata attttgctca ttaaagcctc cctcaaaatc agattaaaat gcactttcag
      781 aggcttacat tttcaaacgg catggctttt gcagcgggcg aaacagtgtc agtaggcaac
      841 aaaaaagccg cctgttgttc agacggcctt agaatcgttt attttatttt ttcggcaaat
      901 tggcttcagc ttccgttatt gttttacggc attcttgcat tgattttcgg taattttgat
      961 aactttcctt atctaaatca gttgtaccgc ctccaccgct tgttaccata ctcttcatca
     1021 ggatttctgc atcttgcgca gcctgtttgc agacgcggta tgggtcatca tctccattcg
     1081 tgtccgcata ataagcgact gcttgagtaa tattttcacg atactttgca agattttctt
     1141 gattaggtat ttctcctttt aaaaacctct caaaatcccc gccaaggcct tgttgcaata
     1201 cacggaaacg ggcggcgcgt tcaaaataaa aagcctgttt ctcatctgca aattgatatt
     1261 tattggcaaa aaaatactgc tccgcatcag ctttctgcga ttgttcttgc ccacacgctg
     1321 ccaaacccaa cgccagcagc acaaaataaa actttttcat atttttctcc aaaataaaat
     1381 gccatacatc tgcatggcat tccattctaa aacaaattct cctgctccgc ttccttatcc
     1441 gcctgcttta aaattcgcca cacatggcgg tcgcttaggc ggtgtgccaa ggccaaatcg
     1501 ttaacggcct cataagcagg ggtaccgcct gccgtctgcc ggtcaaactg actgcggatt
     1561 ttacggtttc gcaactcata caaggccgtc tcgcaacggg gtataaacag attgcacgga
     1621 gccattgcct ccaccagccg accggccgcc tcactgccga taatctcttc caagtatgca
     1681 acacgggatt gactgttttt cgtataaccc tgccgcaaag gataagtcgt accgcccatc
     1741 aggcgcacca gctccagcgt ttcattaaac ccgatgaccg taatcaacgc ttgtacacta
     1801 tcagggagca gatgcttgac cgcatcaggc aaagccgctt tcgcaatctc aaagagctcg
     1861 tcatccggca aagattcgcc caaattcagc gcaacagaca cgcggctata aagttgcacc
     1921 agctcgccat gcttaccgcg caggttggcc accagtcggg gcataccgct caacaccaag
     1981 ccgcagcccg tttcatcatg cagtcggcgg ataatctcaa gggcgcgcaa gggcaggttt
     2041 tccgcttcat cgaccacaat cagacggccc gaatcgcgca ggcggtcaga tacagactca
     2101 aacaaatcat tcaggctgcc catcgccgat accttcgccg ccgtcgccaa cttgcgcatc
     2161 aagaccaaag ccgtaaagct cggattagcc tcaatcaaga tggccgctgg gtttttctcg
     2221 cagtagtttt tgaccgcctg agtctttccc aatcccgcct gaccgtagat caccactgtt
     2281 tcgccgcctt cgtgcgcatt gcgcatcact tccgcgattc ggcgggtcgt cttagtcgct
     2341 acaaaaccca acaccagttc ttcgcgtcgc gccttacttt tctgcatctc caaaaacgcc
     2401 tcgattttcg tctcgatggt ttcataattg ccgccttttt ccgcataagt gccgttcaga
     2461 tacatactga tggatgccgg cgaagtatcg ataccgcgtg ccagttgggt ttggttcata
     2521 cccgattttt ctttaaattc aaccagtttt tgttgtaatg cttgattaat ttgtttcatt
     2581 tttaatatcc ttgagtttta aacaaccttt aaaggccgtc tgaaatgaaa gagtttcccg
     2641 atttggaaaa acgcctgatc atgctggaag tcgccgttca agacttggaa gaaaggtcgc
     2701 ttaccgattc cttcgtactt gcctggctgc tccagcggat tacccgtcaa gagccgactt
     2761 cgattgagca ggttcgcagt ttccttcaag cgcaggcaaa aacgtttgag cctgattccg
     2821 ttcagcggga acaccttgaa tctttgcttg aaatcgttga atccgcccaa gggctcgctt
     2881 gagtttcaat ttttcaacaa gctcggccga aaacgccgca tttttctgtt tttccatcat
     2941 gttttccttt acatatccgc ctcaaacaag aaaatcccgt cgtccgtgcc cgttttcggc
     3001 aataccgcat actccgcctc gatgacgttt ccgcccaaat gtcccagctc gtcccaagct
     3061 gccgcctgtt ccagtgccgg attgacttcc gcattcgcga gcttgattgc attttccgcc
     3121 cgcttgattt tgccttttcg gcgtttttcc gccagttggt cgatacgcgc tgtcgggaaa
     3181 gcctcgcggg tattgccgtt ggcctgcgcc ttagtaataa acttgccgtc catatcaaac
     3241 acattgaccg ccgacgcatc gctcaaatcg tagctgaccc gtacctcgtc tttgtgatac
     3301 tccgccagct cggttgagaa ataagagttg ctgaacaaat ccagccaacc gcgctgtacc
     3361 tttcgcactt cctgcggcat aaacatcgtc gccagctctt ccgccgacaa catatccggc
     3421 gcgataccgt cctgttccag ccttatttcc cgataagcct tcggcgaata atgcccgccg
     3481 tccggatgtc ggggcagctc gccgtgcgga cggttgttgt aatcatcgat acacttgacc
     3541 acatccgcga taaaacgcga ccagctcggc agttttttca aatatttttg ctgttcctcc
     3601 gttaaatcct tgcctttttc caaagcgtta aacgcacttt ccatcttgcg gtacatcaga
     3661 ttcttcgtgc tactgtccat tcctgcgccc gcaaacgtct catactggcg cgccatctca
     3721 atcagattgt ctttccacca tcgctcgatg atgcctcgac cttgcgggtt gcccgcgata
     3781 cccgtttcat ggcggatacc cagtcgggac gtaatacccg tgatttcatg gtctatcgtc
     3841 ttgccggttt ggccgccgcc gttatccgag taatagataa tcggcaaacc aaaatgcttg
     3901 accccgatac gcagagcatc cgataccgcc acacaacttt cagccaacga aaccgaaaac
     3961 ccgaccacaa accgcgtaca accatcaata atcaccgtca cttccggctt aaacggcctg
     4021 ccgtgtacag ggtgtgccac cttcgcctta aagctgtggc cgtcgccgat ccaaacatcg
     4081 ttcggcttca aagcccccca atcacgtttc acataaggca gcagcgattt ataagccgcc
     4141 cccgttttcc tgccgcgctc ctgcataatt agcgggagct tgtcccaaac gcgccgcacc
     4201 atactcaaat taggcacatc attgaccggc atattttccg cttccgccca ctgcacaaac
     4261 cggcggtagc tgtgcgccag tttcggagcc gaagggatgt tgtgaaaccg cataaacatc
     4321 ggcaaccaac cgtagctctc aatcggcttg accgccttcg tcgtcttcgg agccaaagca
     4381 accaaccgct ctatcgcgtt ttccgctttc aaataagcag aaatccagcc gtctaaagta
     4441 cgttcgccaa ccttcgccga ccggctgcgg tcattggcct tttccaagtt cccaagcgtg
     4501 accgcgtcca atttaccttc tgccagcaag cccaaaaact gagccaccgc agccttggca
     4561 gagcaatcgt attcgtattt aatccccaat accgccgcca ccaccgcaca tcgcgcatcc
     4621 gccaccgacc gttgtttctc gttcaacagc ttggccgctt cagccagtgc ctgagccgac
     4681 atcgccgtcc ccggtctgac ttggggcagc attttcggca tcttctccgc cagctcgtcc
     4741 gactgccgtt tcatgatggc tgctcggatt tcggcaggga gggaagcgat ttcatacagt
     4801 tttttaggac ggcctcttcc tttttgctca aaacagtgtt gccaattatt tttcttggca
     4861 tggtattcaa tcccttgtct atcagttggt aggctcggaa ttcctaattt cgcaatatca
     4921 gatgcagata ttttcatttt ttccgctttc tatttttgct taaatgcggt actcttttgg
     4981 aactatttag caaaacagtt atctatttat agatcttggg aaggttggct tatggtttcg
     5041 tttctcaaaa cgagatggct agatttcttc tgcgggtact ccaatcgctg ctgcaatgat
     5101 tctttcgcct ttcagataag gagcatctaa agctttccct aatgtatttg gtgctaaatt
     5161 agcctcgata gataacgctc tcacagacca gcctgccttt ttaagacgag ccacaatgtc
     5221 agcacgatgc caatcagtca tgctttcttg cttttttttc attctcgcaa ttccttaatt
     5281 aagtaggttt attaaccgcc gtcatttagc aaatgagtga attacattta gcaaaacagc
     5341 ttcatgaaac tcttttgcta aaatattttc tcaaaaacgt aattattttt acaaaatatt
     5401 gattatttga gtaatcttat ttaagcaaaa gagtttcttt ttttgcttaa tgttttgctt
     5461 aaatgagtta aattaggatt actatggata cttttttaga taggctcaaa tttctttggc
     5521 ctcatggggc taagccatct gacatctata acaaaataga aatgtcggct tctggattta
     5581 atagagtttg gaaagaggga gctatcccaa cagccgatta cctagtaaaa attcaagaag
     5641 ttaccggttg tgatttaaac tggctgctga ccggaaaagg cttgccgtat ctcgataaag
     5701 ccaggccgga aaacgccgga gcattctctg taagtagaaa ttctgatgga atcaccgaca
     5761 ctatgggcaa tcgtcgacct gtccgagttt gtattcgtgc cgcgctacaa cgtagccgca
     5821 gcagcagggt atggcgcacc agtcttcggc gaagaacctt tattctgctt ggctttccgg
     5881 aaatattgga ttgacaacta tgtgaccaaa cagccggaaa aactgtctgt aattaccgtt
     5941 aaaggcgatt caatggaggg cgtgctcaat catggggatt ccattctcat caaccacgcc
     6001 gaaactgacc cgcgtgacgg cctatatgtc ttgcgtatag gcaatgacct ctttgtcaaa
     6061 cgtgtgcaac gtataccggg caaactgctt gtaacgtctg aaaatccacg ttacgcaccg
     6121 tttgaaatag atttgagcaa tgcccaagac gacatcgcca tcataggccg tgttgagtgg
     6181 tatggccgga gtattgatta aatccatttt aaaaacctct taaaacagtt ttaaaaattc
     6241 cctaatctcg tcagctttaa acagaaaacc gcgcattccg gcgcggtttt gtgaaaaagc
     6301 tggcgtaact tttccggata caaaaaaacg ccgaaatcca cgtcttccga agatttcagc
     6361 gtttttttac tctatttgtt ccttgtgcaa aaactaacag tcccccacag gaaaacgtcg
     6421 ctctgttctg ccacaacggc gaaatcctgt tgagcggcat caacataaac ctcaaaaacg
     6481 gcgattccct gctgatacgc ggcccgagcg gttgcggcaa aacctcgctg ttgcgcgcgc
     6541 tggcggggct ttggccgttc ggcagcagcg gcaaagtcag ccgtccgccg catcaagaca
     6601 tcctctccct gccgcaacgc ccgtacacgg cacagggcag cctgcgcgac gcggtttgtt
     6661 accccgacat tgacaagcag catcccgagt tagccgaagc catgaacacc tgccgcttgg
     6721 gttatctggt tgataaatta gataaaaccg acgactggca acacaaactc tccccgggcg
     6781 aactgcaacg cgtcgccttc gtccgcgccc tgctttccaa gcccaaaatc gtcctgctcg
     6841 acgaagccac cgccgctttg gacgaaccga ccgaggccct gctctaccgc gcactgaaac
     6901 aaaaactgcc cgacagcatc atcatcagca tcggccaccg cagcacgctc aacgcgttcc
     6961 acaatatgca cctcgatgtc ggcaacgctg cctgcggctg aacgatgccg tctgaagccg
     7021 ttttcagacg gcatcgttca aattggaaag gcgcgcgaaa acaacgtaca ataaacccgt
     7081 ttaccacccc tcggaatgcc gaaccgtgaa ccagcttatt ttcgactttg ccgcacacga
     7141 ctatccgagt ttcgacaaat tcctcggcac ggaaaacgcg gaactggtct atgtcctccg
     7201 acacaaacac ggacagttta tctatgtttg gggcgaagaa ggcgcgggca aaagccatct
     7261 tttgcaggcg tgggtcgcac aggcgctcga agccggcaaa aacgccgcct atatcgatgc
     7321 cgcctccatg ccgctgaccg atgccgcgtt cgaggcggaa tacctcgccg tcgatcaagt
     7381 cgaaaaactg ggcaacgaag aacaagccct gcttttttcc atcttcaacc gcttccgcaa
     7441 cagcggcaaa ggctttttgc tgctcggttc ggaatacacg ccccagcagc ttgtcatccg
     7501 cgaagatttg cggacgcgta tggcgtactg cctcgtttac gaagtcaaac ccttaaccga
     7561 ccaagaaaaa atcgacgcgc tcgccagtat ggcggcggca cgccaagtaa ccgtcgattc
     7621 cgaaattttc gaatacctgc tcaaacactg gcggcgcgat atggacagcc tgatgatgat
     7681 gctcgacacg ctggacaact acgccgtcac aatgggcaaa cgcatcaccc tgccgctttt
     7741 gcgccagctt ttgaaacaac aggaaaccca atgaaaaacc tcgccatctt cgacctcgac
     7801 aacaccctca tcaacaccga ttccgaccac gcctggccgc aatacctcat caaaaaaggc
     7861 ttggttgacg ctgccgaaac cgaagcgcaa aacgaaaaat tctaccgcga ctaccaaaac
     7921 ggttgcctcg acatcgacgc attcctcaaa ttccaccttg ccccgctcgc tcgttacagc
     7981 aaagaagagc tggcagagtt tcaccgcgaa tttatggcgg aatacatcat cccccacatc
     8041 tcgcctatgc agcgtatgct ggtgcagagc caccaaatgg caggcgacga aaccctcgtc
     8101 atctcatcga ccaacgagtt catcatcacc cccgtctgcc gccttttcgg cattaccaac
     8161 atcatcggca cacaactcga atccggttcc gacggccgct acaccggcaa ttacatcggc
     8221 acgcccagcc tcaaagaagg taaaatcacc cgcctgaacc aatggctcgc cgaacgcggc
     8281 gaaacgctcg aaagctacgg caaaacctat ttttacagcg actccaaaaa cgacctgccg
     8341 ctgctgcgcc tcgtcgacga acccgtcgcc gtcaaccccg atgccgagct ggaaaaagaa
     8401 gccaaagaaa aaggctggcc ggttttgaat ttcaaatgac gcaatgccgt ctgaagcccg
     8461 attcggcgtt cagacggcat tgaggctgaa atccaaaaaa ctcaaagcca caggaattta
     8521 tccggaaaaa caaaaaacac aggaattcat cgggaaaaac aacaatcttt ccaccgtcat
     8581 tcccacgaaa gtgggaatct tgatccgtcc gcacggaaac ttatatttcg tcatttgcac
     8641 ccgacataat tcaatacttt attttgcaat aaattaacgg atactgacaa attagattgg
     8701 attaattacc ctattatcca tattgggtta tcgggttgct aattgagcag agcgtagcaa
     8761 accataaagt gagtgtttcc acccactctg catttatagt ggattaacaa aaatcaggac
     8821 aaggcgacaa agccgcagac agtacagata gtacggcaag gcgaggcaac gctgtactgg
     8881 tttaaattta atccactata ctatgaagtg gttattaaat atgataatga gacctattaa
     8941 atttattatg gtaaatacgt tattatttat tgttatatgt agttcatttt ttgatctgct
     9001 cgttcaatta tgtacaattt tatttcatag ccaaaaaata tactttatta cattattttt
     9061 attatttatt tttaattttg ttacaaaatc tatctatatg gcaattattt atcctatttt
     9121 atattttttt acgataaaaa aatattatcc ttactctagg aaagtgataa ttctattatt
     9181 attagcatta tctatatatt ttagttttat ggacttttac tttttttcca tatattcaga
     9241 taaccttagc tatgaaacgg agcctttaca tttatacatc cctattatta ttaatttttt
     9301 ctcactttta gtttctaatt ttattttatc ttttatcaac aagtaaatgt atatacaaaa
     9361 tacaatccaa aagatcctaa gcaaaccacc aatcccacac cacccttacc ggttcaaatc
     9421 cgcacaaaaa cccacatccc gtcattccca cgaaagtggg aatctaggac gtatagtgga
     9481 ttaacaaaaa tcaggacaag gcgaccaagc cgcagacagt acaaatagta cggaaccgat
     9541 tcacttggtg cttcagcacc ttagagaatc gttctctttg agctaaggcg agccaacgcc
     9601 gtactggttt ttgttaatcc actataaaat ctaaagaaac cttttttccc gataagtttc
     9661 cgtgccgaca ggtctagatt cccgcctgcg cgggaatgac gaaatttcaa agttatggcg
     9721 ttatcggaaa aacagaaaat caaagccgga gaatttatcc caaacaactg gatttcaaaa
     9781 aaaccagatt cccgccttcg cgggaatgac ggattttagg tttctgtttt ggtttctgtt
     9841 ttcgcgggaa taacaactta gaaattgccc gaaaccccaa aaacagaaac cggacaaacg
     9901 ggttttccgc caaagccggc attttccgac tttgcttcag gcatcttccc caccgcccaa
     9961 aatcatcgaa ccgataccgg catcggtaaa gatttccagc aaaagcgcgt tgggcaacct
    10021 gccgtcgatg atatgcgtgg ctttcacacc gttgacggcg gcttcgaccg cagaagcgat
    10081 tttcggcagc ataccgccat acagcgtgcc gtcggcaatc agttcatcaa tccgtttcgg
    10141 cgtgagtttg gtcagcagat tgcccgtttt gtccatcaca ccggcgatat tcgtcatcat
    10201 caagagtttt tcagcgttta attcttccgc caatttgcct gccaccaaat cggcgttgat
    10261 gttgaacgct tcgccttttt cacctacgcc gacgggggcg acgacgggaa tgcagccacg
    10321 ttctatcagc cctttaacca aacctgtatc aatgctttcc accgtaccga cctgtccgat
    10381 gtccacgcca ttctgttcgg gcgtatcgat caaaagtttc ttcgccttaa tgaaatgatc
    10441 gtcgcgtccg ctcacgccga ccgcgtgtcc gccatatgtg ttaatcatcg acacgatttc
    10501 tttattgaca tgcccaccca acaccatttc gacaatatcc atcgcctctt tgtcggtaac
    10561 gcgcattcct tggacaaact cccccttttt gccgactttt tcaagcatcg cattgatctg
    10621 cggcccgccg ccgtgaacga tgacgggatg aatgccgacc agcttcagca gtacgacatc
    10681 gcgggcaaac ccttctttca aggcaggttc ggtcatcgcg ttgccgccgt acttgatgac
    10741 ggcgaccgaa ccggaaaacc ggcggatgta aggcagcgct tcggcaagga tacgcgcttt
    10801 gtcggcggcg gaaataatgt tttcagactc cataacggct ccctattgtt gacaatttcg
    10861 gcttatgtta acgccaaacg ccgtctgaaa caatcttcag acggcatccg gcagaccttc
    10921 gggcaggttg aagccttgcg atacgggcgg taaaatcaca gtttatccgg ttcgagaaac
    10981 cggcgacagc aaggactttc ccatgattaa aatcagcacc cgcttcgatg ccggctcggt
    11041 cgtcgtcaaa gacctgaccg atccttccaa catccgcctc gccctgcgtc ccgacaacgc
    11101 ctccgatttt gcacaatggt tctacttccg gctgcaaggc gcggcatatc aaaactgcat
    11161 catgcatttt gaaaacgcgg cagaagccgc ctacccgaaa ggctgggaag gctatcaggc
    11221 gtgtgcctca tacgaccgcc gcaactggtt ccgcgtaccg acttcctacg aaaacggcgt
    11281 actgaccgtc aatcatacgc cgctgtccaa cagcgtgtat tacgcctatt tcgaacctta
    11341 ctccgaagaa cagcatttaa acctcctcgg cgacgcgcaa ggcagcggcc tgtgccgcat
    11401 cgacgacttg ggcagcaccg tgcaagggcg cgacatcaat ctgctgacca tcggcaatca
    11461 ggtcgaaagc gatctgaaaa tctggattac cgcccgccag catccgggcg aaaccatggc
    11521 ggaatggttt gtcgaggggc tgctcggcag gctgctcgat ccgcaagacc cgacagcgcg
    11581 caccctgctc gaccgcgcca cgttctatat cgtccccaat atgaaccccg acggttcggc
    11641 actgggcaac cttcgtacca acgccgccgg tgcgaacctc aaccgcgaat gggaaaatcc
    11701 gactttggaa aaaagccccg aagtgttctt cgtgcgcgaa aaaatgctgg aaaccggcgt
    11761 ggatttgttc ttggacatcc acggcgacga agggctgccc tttatctttg ttgcaggaac
    11821 tgaaggcgtg ccaaactaca atccgcgcat ttccgcgttg gaaacacagt tcaaaaccgc
    11881 ccttttgaac gccagccccg atttccaaga cgaatacggt tacgaaaaag atgcgcccgg
    11941 tcaggcaaac atgaccttgg caacaaactg ggtcggcaac cgtttcaact gccttgccta
    12001 tacgttggaa atgccgttca aagacaatgc caacctgccc gacgacgatt tcggatggaa
    12061 cggtcaacgg tcgttgcgct tgggcgaagc cgcgttgtcc gccatcctca acatcatcgg
    12121 cgatttgcgc tgaaaccctt attgcagaaa tgccgtctga agcatcatgc ctttcagacg
    12181 gcatttgaaa acgaaagccc gttatgatta cccatcccca attcgacccc gtccttatca
    12241 gtatcggccc gcttgccgtc cgctggtatg ccctaagcta catcctcgga tttattcttt
    12301 ttacctttct cggcagaagg cgcatcgcgc aaggcttgtc cgtttttacc aaagaatcgc
    12361 tcgacgactt cctgacatgg ggcattttgg gcgtaatttt gggcgggcgt ttgggttacg
    12421 tcctgtttta caagttttcc gactacctcg cccatccgct tgatattttc aaggtatggg
    12481 aaggcggaat gtcgttccac ggcggctttt tgggtgtagt tattgccata tggttgttcg
    12541 gccgcaaaca cggcatcggc ttcctcaaac tgatggacac ggtcgcaccg ctcgttccgc
    12601 tgggtctcgc ttcgggacgt atcggcaact tcatcaacgg cgaactttgg ggacgcgtta
    12661 ccgacatcaa cgcattttgg gcaatgggct tcccgcaggc gcgttacgaa gatgccgaag
    12721 ccgccgcgca caatccgctt tgggcagaat ggctgcaaca atacggtatg ctgccgcgtc
    12781 atccctcgca gctttatcag tttgcacttg aaggcatctg cctgttcgcc gtcgtttggc
    12841 tgttctctaa aaaacagcgg ccgaccggac aagtcgcctc gctcttcctc ggcggctacg
    12901 gcatattccg cttcattgcc gaattcgcac gccaacccga cgactatctc gggctgctga
    12961 ccttggggct gtcgatgggg caatggttga gcgtcccgat gattgttttg ggtatcgtcg
    13021 gctttgtccg gttcggcatg aaaaaacagc actgaccgcc tgtgaaaaat accgtctgaa
    13081 acatggaaat ccggtttcag acggcatttt tacgtttggt tcatggaaac aaacgcttca
    13141 attcttaccg caacacgcct tgtattttct gccgctgccg cacggacagg gatcgttcct
    13201 gcctgttttt tcgccttccc tgcggacggt ttgcggcttg ttgatgaccg cctgccagta
    13261 gcggtagata tccgccaatg cataaggcaa ctcggattcc agttccgcca gctcgccttc
    13321 tgtgaattgc agacggatag tgccgttgtc ctcttcgtcg taaataccgc ccaatgccat
    13381 gatgggataa aacaactctt caaacgcttc atcatcgacg gcttcaaacc aatcggtcgg
    13441 cacaatatcc aaaccgtaaa gataagcatt gcaccatgtg taaaaatcgc tgccgccgtc
    13501 ttcgttttca tacagccaca aatcgggcag ttttttatcc gacatcgcgg cggttgtttc
    13561 catcgccatt gccaaaacca gccgttcgat ttcggaacgt tcggcggcgg taaattgcga
    13621 ttcgtcgccc aacacttcgg gcagccagtc gagcggtgtc aatttgtccg gcccgctcaa
    13681 cagcgccgtc ataaaacctt gaacctcgtc gcaacgcatc gtgttgcctt gttcgctttt
    13741 ggcatccaac aattcgctca accgccgttt ggatgcttcg gtaaattttt gggaatccat
    13801 catttaacct tttaaaatgg gtttaatacc taattataat cgcaatatgc cgtctgaagc
    13861 ctttttctgc ttcagacggc atcgtctgtt ttcacgctca aatcgtaccg ctgccttgcg
    13921 ctttcggttt ggcggcacta aattccagtt tgctcaaggc ggaaaggtag gctttggcgg
    13981 tggcaaccaa aacgtcggta tccgcgccct gaccgttgac gacgcggttg ccgcgtgcca
    14041 gacggacgct ggtttcgcct tggctttccg taccttgcgt gacggcattg acggaataaa
    14101 tctgcaaagt cgcgccgctt tgcgccacgc tttcaatcgc tttgaaaatt gcatcaaccg
    14161 gaccggaacc ggttgcggaa gcgcgttttt cttcgccttt gatgctgaac acgatgtcgg
    14221 cgcgcggctc ttcgccggtt tcggtgctga ttttttggga aatgaatttg tagctttcgg
    14281 tattcatatt gcccatttcg tccgacacca gcgcgtgcag gtcttcatcg aagatttcgc
    14341 gttttttgtc ggcgagttct ttgaagcgtg caaatgccgc gttcagtgcc tcttcgcttt
    14401 ccaactcgat gcccaaatcc gccagcttgg ttttgaaggc gttgcggccg gacaatttgc
    14461 ccaagctcaa tcggttagcc gaccaaccga ccgattcggc agacataatc tcgtaagttt
    14521 cgcggtgttt cagcaccccg tcctgatgga tgcccgattc atgcgaaaag gcattggcac
    14581 cgacaatggc tttgttgggc tgcacgggat agcccgtaat ggtggacacc agtttggacg
    14641 aaggcacgat ttgcgtggta tcgatgccgg tttccaagcc gaacaagtcg tggcgcactt
    14701 tcaacgccat cacgatttct tcaaccgaag cattgcctgc acgttcgccc aagccgttga
    14761 cagtacattc cacctgacgc gcaccgcctt ttaatgcggc aagcgaattg gcaaccgcca
    14821 agcccaaatc gttgtggcag tgtgccgacc aaacgacttt gccgccgttg ggcgttttgg
    14881 caatcagttc gcggaaaaat tcttcggttt tgtacgggat ggaatagccg acggtatcgg
    14941 gaatattgat ggtggtcgcg cccgcttcaa ttaccgcgcc gcagatttcg gcaaggaaat
    15001 cgatttccga acgcaacgcg tcttcgcagg aaaattccac atcgtcggtg tattcacgag
    15061 cgattttcac cgctttgacc gccgcctcaa tcacctgctt cggcttcatc ttcaatttgt
    15121 actccatatg gatggggctg gtggcgatga aggtgtggat gcgttttttc ggcgcgggcg
    15181 caacggcctc acccgcctga cggatgtccc gctcgatggc gcgggacaat gaacagaccg
    15241 ttgatttggt aatggttttc gcaatcgcat tgaccgcctc gaaatcgccc gggctggcag
    15301 cggcaaaacc cgcttcgatg atgtccacac ccaatttttc cagctggcgg gcgacgcgga
    15361 ttttttcctc tttggtcata gcagcgccgg gcgactgctc gccgtcgcgc agggtggtgt
    15421 cgaaaatgat aacgcggttg gcctgtgtca tttctgttct ctccagagat tcgttttttt
    15481 gtaaaaaagc attcaaatcc agcggcctgc cttgcgattc ggcaagtgca gtcaattttt
    15541 gcagctgcgc caaaggcagc gagccgcgcg tgcgccattt gtagatggcg gcagttgtcg
    15601 cggcattttc gggatcgtgc cgtttcaacg cttcggcaag cgcgttcacg ccgccgaaat
    15661 aggcgaccag acggtctata tctaattgca tggtagtcct tgtctaaaat caatctgccc
    15721 gcagcagaaa tatggacagg attatacgca ttttagacaa aacggcaata tcaatttgaa
    15781 aaaatctcaa taactcatca tagattttat taattttata cattttgtct attttattgc
    15841 aggcccagcg caattgttga caattgcggc agaacagggc aaattcgaca gcaacaaacc
    15901 aaacgctaca aacgcaaaga acagaaacaa tgaaatacaa gagaatcgta tttaaagtcg
    15961 gcacatcttc gattacccat tcggacggca gcctctcgcg cggcaaaatc caaaccatta
    16021 cccgccagct tgccgcattg catcatgcgg gacacgagct ggtcttggtt tcatccggcg
    16081 cggttgcggc agggttcggt gcgctgggtt tcaaaaaacg tccggccaaa atcgccgaca
    16141 aacaggcttc cgccgccgtc gggcaggggc tgctgatgga agaatatacg gcaaacctgt
    16201 cttcagacgg catcgtgtcc gcgcaaatcc tgctcaaccg caccgacttt gccgacaaac
    16261 gccgctacca aaatgccggc ggcgcgcttt ccgtgctgct gcaacgccgc gcgattccca
    16321 ttattaatga aaacgacacg gtttcggttg aggagttgaa aatcggcgac aacgacacat
    16381 tgagtgcgca agtggcggcg atgatacagg cagacctctt ggtgctgctg accgacatag
    16441 acggtcttta cacgggcaac ccgaacagca atcccgatgc cgtacggctg gacagaatcg
    16501 aacacatcaa ccatgaaatc atcgaaatgg caggcggcgc gggctcgtca aacggcacgg
    16561 gcggtatgct gaccaaaatc aaagcggcga cgattgcgac cgagtccggc gtaccggtct
    16621 atatctgttc ctcgctcaaa cccgatgcgc ttgccgaagc ggcagataat caggcggacg
    16681 gctcgttttt cgtcccccgc gccaaaggtt tgcggacgca gaagcaatgg ctggcgttct
    16741 attccgaaag ccggggcggc gtttatgtgg acgaaggtgc ggaacacgct ttgtccgaac
    16801 agggaaagag cctgctgatg tcgggcgttg ccggaatcga agggcatttt tcccgtatgg
    16861 acaccgtaac cgtgtacagc aacgcaacca aacagccttt gggcaaaggg cgcgtccttt
    16921 tcggctctgc cgccgccgaa gacctgctca aatcgcgcaa agcgaaaggc gtgttcatcc
    16981 atcgggacga ttggatttcc atcacgcccg aaatacgcct gcttctgacc gaattttaga
    17041 aaaggaaacc catgtcaaac acacaaaaac agcttgccct tgccaaagcg gcaaaaaaat
    17101 ccgtcaacac ggcggatacg gaagaaaaaa accgcgcgct gcttgctatg gcggacagtc
    17161 tggaagcggc ggcggcagat attttggcgg caaaccgttt ggatttggaa gcggcggcag
    17221 gcaaaattcc cgaaagcatg accgaccgcc ttttgttgga cggcaaacgc atttgcgcga
    17281 tggcggacgg catcagggcg gttgccgcgc tgcccgaccc cgtgggcgaa atactggaaa
    17341 cctcgactct gcccaacggc ttggaaatcg tcaaaaagcg tgtggcgatg ggcgttatcg
    17401 gcattattta cgaaagccgc ccgaacgtta cgtccgatgc ggcggctttg gcactgaaaa
    17461 gcggcagcgc ggtcgtactc cgcagcggca aagatgcatt ccaatccgca cgcgccatcg
    17521 ttgccgcact caaagccggt ttggcgcaaa cccgcatcga ccccgacgcg ctccagttga
    17581 ttgaagacac cgggcgtgag ggcagttacg aaatgatgag ggcgaaagat tatctagacc
    17641 tgctgattcc gcgcggcggg gcggggctga tacgggcggt ggttgaaaat gccgtcgtgc
    17701 cggttattga aacggggacg ggcatcgtcc acatttatat cgacaaggac gcggattggg
    17761 acaaggcgct ccgtatcgtg tacaacgcca aaaccagccg tccgtccgtg tgcaactcga
    17821 tggaagtgct gctggtgcat gaagacattg ctgccgactt cctgcccaag ctcgaacggc
    17881 tgttggttcg cgaccgtata aaagccggac tgccgcccgt ccgcttccgt ttggatccgc
    17941 aggcggcacg gcatatcggc ggcgaagcgg cgggtgcaga cgatttcgat accgagtttt
    18001 tagactacat cctcgccgtg aaaaccgtcg cttcggtcga agaggcggtc gggcacatcg
    18061 aaacgcacgg cacgcaccat tcagacggca tcgttaccga aaaccgccac gctgcggact
    18121 atttcacgac ccatatcgat tctgccgccg tgtatgtcaa cgcgtccacg cgctttaccg
    18181 acggcggcga attcggcttg ggttgcgaaa tgggcatctc cacgcaaaaa ctccacgccc
    18241 ggggtccgat gggtttgaaa gagctgacaa gctataaata catcattcgg ggcgttgggc
    18301 aggtcaggga ataatccgca ttcaaacgtc cgataaaaat gccgtctgaa acagtcttca
    18361 gacggcattt ccatttgcaa aaaaatcaag cattgtccaa ggggacgaga atcgtacggt
    18421 tgccgttgtg ttccggcgcg gatacgatgc cttccgcctc catctggtca atcagccgcg
    18481 cggcgcggtt gtagccgata cgcaatgcgc gctgcacgcc agaaatgctg gctttgcgcg
    18541 ttttcaaaac aacggacacg gcctcatcgt acatcggatc ggtttcgccg tcgccgctgc
    18601 gcccgatgcc gggcagctct tcgctgccgc cgccgctcaa aatatcgtca acatagtccg
    18661 gttcgccaaa ctgcttcaga tattcgacca cgcggtgcac ctcttcatcc gaggcaaacg
    18721 cgccgtgaac gcgctgcgga taggcagtac ccggcggcag gaacagcata tcgccctgac
    18781 cgagcaggtt ttccgcgccc atttggtcga gaatcgtgcg gctgtcgatt ttgctggaca
    18841 cttggaacgc gatacgcgtc gggatgttcg ccttaatcag acccgtgatg acatcgacgc
    18901 tggggcgttg tgtggcaagg ataagatgga tgcctgccgc gcgggctttt tgggcgaggc
    18961 gggcaatcag ttcctcgatt ttcttgcctg ccgtcatcat caaatcggca aactcatcga
    19021 ccaccaccac gataaacggc agtttttcca aaggttcggg atcgtcgggc gtgaggctga
    19081 acgggttgcc gattttctcc ccccttgctg cggcttcggc gattttttga ttgaaacccg
    19141 caagattgcg cacgcccata aagctcatca ggcggtagcg tttttccatt tcgttaacac
    19201 accagttcag cgcgtttgcc gccagcttca tatcggtaac gacaggggcg agcaggtgcg
    19261 ggatgccttc gtaaatgctc aattccagca ttttcggatc gatcataatc atacgcacgt
    19321 cttccggcgc ggctttgaaa agcatagaca gaatcatcgc gttgacaccc accgatttgc
    19381 ccgaaccggt cgtgccggca accagcaaat gcggtgcttt gcccaagtcg gttacgacgg
    19441 gctgtccggt gatgtcctga ccgagcgcga gcgtcagctt ggatttggat tcggcaaact
    19501 cgggcgaatt gaagatttcg ctcaggcgta tcatttggcg tttcgggttc ggaagttcca
    19561 aacccataca ggttttgccg aggatggttt cgacaacgcg gatggaagcc acgccgagcg
    19621 aacgcgccaa gtctttttcc agatttagaa cggaattgcc gcgcacgccg acatcgggtt
    19681 cgatttcata acgcgtaatc acggggccgg aataagaatc gacaaccttg accttgactt
    19741 tgaactccgc caatttttct tcgatggtga tgctgttttc caacagttct tcttcggttt
    19801 gcgtcgcctc gggattgaac agcggcggca gaagcaggtc ggttgtcggc aggtgttcgg
    19861 ataccgcacc ggtttcttca gatgggaacg ccccttcatc cgcttccgta tccgataccc
    19921 ggcaggacgg gcgttcagac ggcacatttt caaacggaca aaccgcctga ctgtcatgcc
    19981 cgaacgcttc ggtttccgac agatattgcc cgtttgaccg ctctgccgca ccttcactgc
    20041 cgtcatctgc aatagcggcg gtttcctcct gccaacctcc attcaaaaca tcatcggcaa
    20101 gatggtcggt ttcagcaatg cggctgcgtt gcgcctgctc gaatcctgtc ggcggctcat
    20161 aggtacggtt gtagatttcc gatacgggag gcggcggcgg aatatcgatt gcgggcatgg
    20221 gaactttcgg cacttcgggt ggttcgacca cccaagcatc gggcgcagca ggttcttcaa
    20281 tatagatatc ggcagcttca tcataaaccg gaccgccgta tcccacagac gaaacggttt
    20341 ccgtgaaaac attttcggtt tcagacggca tttcgacatc ccgtttcccg acaaccgtcc
    20401 gactttccgg aatcaggcgc gaaatccgcg cctccgcaga aaccgttgcc ttgttcggtt
    20461 ctttcaaatt gacggaaacg cggcggcagg catcgcggac ggctgtgccg tctgaaacgg
    20521 actgtccttg ggaaacatcc ggggattttg cctccgcctg ccctgcatga cggcggaacg
    20581 gcgcattccg tgcattttcg gctttgactg cagaaaaggc agacggatgc tgcttctcaa
    20641 aatacggctc aaatccgtaa tccgcagact cggaaaacgc ttctttgtcc gcatcgaaca
    20701 tacgggaata cgtgcgttga agcacagggt cgtccaaacc gataatctgt agcccttcca
    20761 tcggggtatc ggacacgcgg actttgggga ccgctgtttc gtttttctca aatgcatcga
    20821 tatagcgttt tttcgtttcc cttaaagccg cgctgtttaa agcacgcgtt gcttcttcca
    20881 aagtgatttc cttaaaaacc ggacggacgg gcgaaatttc gctttcagac ggcatcaacc
    20941 cttcagcaat actccggtcg aatgggatgc ggcggttgtc gattacggca gttgcaatgt
    21001 cttccgtatc ggcagcctct tcctccgcag cttctgcttc ttccgtttcc gcttcttccg
    21061 tcccgtttcc actgtctgaa tatccgtcgg atgcggtcgg aacatccgca cggtttgcag
    21121 aagcaggcgg aacgggcctg tccggttcgg attcgtgcgc cagatagttt cggcagaaac
    21181 ggacgacacc gacaaacagc caatacactg ccgttttgac ggcatggaaa agcatcaggg
    21241 caagttcggg aaaatcgggc ataccgtctt tgatttcagg cagctccgcc tgtttttccc
    21301 ctttcttttc ctgccacgca gaaacctcgc gcatccactc gcgttcggat tgtgcgcgga
    21361 caaaaaacaa gccggcaagc gcaagcaaca aaataacgat caaaactatc caaaacatat
    21421 gccgtttccc gcaagacaaa cgattaaacg ggtttatttt aacgtgtttc catcccaaaa
    21481 aaaacaaccg gtcggcaatt ctgccgaaac cgattcggct ttcggtttgc ccccgccgac
    21541 agtataatag ccgtcctttc ccttaatctt tgcggcattg ccatgatttt ccaaacagtc
    21601 tggttttcag atatggtact gtcggtttcg tggattgtcc ttatcctgat actggcagct
    21661 tccgcgccgt ccgcattccg ctcgcttgcc cgctaccgtt ccgcccttcc cctgtgtacc
    21721 gtaatttttt ccgcagcatg gtgtctgaac gcctctgccg gcggcggaca gcttgcccag
    21781 atgaactacc atctgctcgc cgtcaatctg gttgcactga tggtgggcac ttccgccgcc
    21841 ttttggcttg ccgcgctgct gatgctgccc tactgcctgc tgtttgccgg ttctgccggc
    21901 gcatatccgc cgaacgcttt ggtgctgatt ctgcccgcgc ttgccgtcaa ccgcctgtcg
    21961 cgtatgctgg tcaaccgcct gccgcccaat attttcatct ttattttcgt caacggcttt
    22021 ctcgcttccg ccgccggcat tctgttgacc gggctggtgc tgaccggtat tttggatgct
    22081 gcaaacgctt ttccgtccga aatattgtgg acgaccgccc tgcccgtctt tattctgctg
    22141 gcgtgggcgg aagccttcct cagcggcatt tcaactgcca tatttgttgc actgaagccc
    22201 cattggatca acactttcga cgacaaccgc tatctgaagt ccgaccgcgg catatggcgg
    22261 tagccttcag acggcatagg cagacaaaac catgctttcc aacatcatcc ccctttccat
    22321 cggtgcggca ctcggtgcaa cggcgcgttg gctgctcaac ctcgccgttc ctgccgccat
    22381 gtctcccgcc acgggcaacc tgtttgccaa ctggacgggc gcgctgctca tcggcatctt
    22441 tgccgaaacc atcaatcacc cgcaatggaa gctgctgctg attaccggtt ttctcggcag
    22501 cctgaccacg ctttccggat tttcactgga aaccgtaacc ctgctccaat cgaatcgtcc
    22561 tgcttcagca cttgccaata ttttcctaca cacggcaggt tcgctgctgc tgacttggct
    22621 cgggctgaag ataggggcgg cagtcaaata accgcaacaa attgcctccc tttgttttga
    22681 cataatctat aaattagctt cgcttgttta aatactggct gtgccaa
//
LOCUS       DBBZXU010000020        22387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.020, whole genome shotgun sequence.
ACCESSION   DBBZXU010000020 DBBZXU010000000
VERSION     DBBZXU010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.020"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..99
                     /locus_tag="ACJJDE_000676"
                     /pseudo
     CDS             1..99
                     /locus_tag="ACJJDE_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(120..1034)
                     /locus_tag="ACJJDE_000677"
     CDS             complement(120..1034)
                     /locus_tag="ACJJDE_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7540643.1"
                     /translation="MDAVQLKSFVAVAHEGNLTQAAKRLFLSQPAVSAQIKALEEYVG
                     TPLFRRTGKGMVLTRAGEILLPEAESLLQYKHKLEHFAKTLAGDYSEETSLGIIHPID
                     SAKLVALTDNIGQTAPKTRLHIQYGMSGEILSRIQHKTLHGGFILGNAAQRGIRSVFL
                     QNLTYALICPQSQYPHLTRSLPQSLQECVWIEMSGVSGSRKHLHQFWRSNRLSPKKQI
                     LCDYPQTIIDLVAGGIGVAMVPGNKAEAAAKEGAGVAIIESCRHSMPLNFIYAEEYED
                     NPHVSLLLECIEKVWGVQAVQPPVVSDN"
     gene            1302..2771
                     /locus_tag="ACJJDE_000678"
     CDS             1302..2771
                     /locus_tag="ACJJDE_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3360 family protein"
                     /protein_id="HGG7540644.1"
                     /translation="MDKHNGTYRDLHRPASEFATRDEYLEHELQIMQPKRWRPNLPFR
                     DYRFEWEDLIPAMAGTIGKVVMVGAVAAAFAAPLGLPDSFVLENVRYELLIAAAFILL
                     VSGFFLPGANLPGTHGPLIPMIPIVVSAGGHPLAFGISIAVLGLLMALFRGGSIMAKL
                     TSNGVCGGLLLYLGFIGTTGQVKKLFSWAGGFNMPYIAFTVIIVTIVMYALLEHWKKR
                     WLAVPLGCLIAGVVAFALGAPFEFHTAPGLPPMSPAYWWGENSGWHLGLPTAESFLVV
                     FPFAVLAVAMWSPDFLGHQVFQKISYPEKTDKVLMNIDDTMTSCSVRQAVGSILGGAN
                     FTSSWGTYIVPASIAKRPIPGGAVLTAVLCIIAGLWGYPMDLAIWQPVLSVALVVGVY
                     LPLLEAGMEMTRKGKTTQSAAIVVFSSALVNPVFGWALTMLLDNLGLIGCKERSAQLG
                     FAGRVLIPAVGFLILCVAMGAVGMLPGIPPFLEHFKSLG"
     gene            3023..3394
                     /locus_tag="ACJJDE_000679"
     CDS             3023..3394
                     /locus_tag="ACJJDE_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540645.1"
                     /translation="MNKTLSILPVAILLGGCAAGGGNTFGSLDGGTGMGGSIVKMAVG
                     SQCRAELDKRSEWRLTALAMSAEKQAEWENKICACVAQEAPERMTGNDVMQMLAPSTR
                     NQALAALTAKTVSACFKHLYR"
     gene            3467..4876
                     /gene="thrC"
                     /locus_tag="ACJJDE_000680"
     CDS             3467..4876
                     /gene="thrC"
                     /locus_tag="ACJJDE_000680"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HGG7540646.1"
                     /translation="MKYISTRGETAHKPFSEVLLMGLAPDGGLMLPEHYPQIGRETLD
                     KWRGSAYPELAFEIMRLFVTDIPEDDLRDILNRTYTEAAFGTKEITPVRTLSDGIKIQ
                     ALSNGPTLAFKDMAMQFLGNAFEYVLNKEGKKLNILGATSGDTGSAAEYALRGKKGVN
                     VFMLSPDGKMSAFQRAQMYSLQDGNIHNIAVKGMFDDCQDIVKAVQNDAAFKEKYHIG
                     TVNSINWGRIVAQVVYYFAGYFKATQSNDEQVSFCVPSGNFGNVCAGHIAKQMGLPIR
                     RLIVATNENDVLDEFFKTGAYRPRNSAHTYVTSSPSMDISKASNFERFVFDLMDRDPQ
                     EINTLWAEVAAGKGFDLRFALEKVGGKYGFTSGKSTHPDRLATIRQVYEQDQELIDPH
                     TADGVKVAREVREEGETVVCLETALAAKFDATIREAVGDAAIPRPAALEGLETLPQRV
                     QTVPNSADAVKGIIEQTLA"
     gene            4923..5717
                     /locus_tag="ACJJDE_000681"
     CDS             4923..5717
                     /locus_tag="ACJJDE_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540647.1"
                     /translation="MTLPMQETHFSILLDELAAKQEAAIAPHLLADGTKVWIRKAGRH
                     NARWRYALLGMVARYLKLGVLKPVPSLGGEPAIATESKRLYELRAAGIAVPELLAVRK
                     NALMFGNLEGIPLDTQIRQEAEAGKADAWLAGLEAIARVHKKQQFLSQAFARNMMSDE
                     ENISFLDFEDDPSEVLTIAQCQARDWLCYIHSTALILKNGGLLEAAAEKWGGVLSEQP
                     AEIQRLIAATVKPILPIRRLEHPRWGRDALRLAASISLISLADIPP"
     gene            5905..6681
                     /locus_tag="ACJJDE_000682"
     CDS             5905..6681
                     /locus_tag="ACJJDE_000682"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7540648.1"
                     /translation="MAAFNTQKVLSVHHWTDAYFTFTCTRDESLRFENGQFVMVGLMV
                     DGKPLMRAYSVASANWEEHLEFFSIKVQDGPLTSRLQHLKVGDDVLISKKPTGTLVAG
                     DLNPGKHLYLLSTGTGIAPFLSITKDPEIYEQFEKIILVHGVRYKKDLAYYDRFTKEL
                     PEHEYLGDLVKEKLIYYPIVSREEFEHHGRLTDLMVSGKLFEDIGLPKINPQDDRAML
                     CGSPAMLKDTCKVLDDFGLTVSPKTGVRGDYLIERAFVDQ"
     gene            6757..6863
                     /locus_tag="ACJJDE_000683"
                     /pseudo
     CDS             6757..6863
                     /locus_tag="ACJJDE_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(7442..9913)
                     /locus_tag="ACJJDE_000684"
     CDS             complement(7442..9913)
                     /locus_tag="ACJJDE_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HGG7540649.1"
                     /translation="MKKTCFHCGLDVPEHLHLTVRYENEDRETCCAGCQAVAQSIIDA
                     GLGSYYKQRTADAQKTELPPQEILDQIRLYDLPEVQSDFVETHGGTREAVLMLGGITC
                     AACVWLIEQQLLRTDGIVRIDLNYSTHRCRVVWDDGKIRLSDILLKIRQIGYTAAPYD
                     AQKIEAANQKERKQYIVRLAVAGLGMMQTMMFALPTYLYGGDIEPDFLQILHWGGFLM
                     VLPVVFYCAVPFYQGALRDLKNRRVGMDTPITVAIIMTFIAGVYSLATNAGQGMYFES
                     IAMLLFFLLGGRFMEHIARRKAGDAAERLVKLIPAFCHHMPDYPDTQETCEAAVVKLK
                     AGDIVLVKPGETIPVDGTVLEGSSAVNESMLTGESLPVAKMPSEKVTAGTLNTQSPLI
                     IRTDRTGGGTRLSHIVRLLDRALAQKPRTAELAEQYASSFIFGELLLAVPVFIGWTLY
                     ADAHTALWITVALLVITCPCALSLATPTALAASTGTLAREGILIGGKQAIETLAQTTD
                     IIFDKTGTLTQGKPAVRRISLLRGTDEAFVLAVAQALEQQSEHPLARAILNCRISDGS
                     VPDIAIKQRLNRIGEGVGAQLTVNGETQVWALGRASYVAEISGKEPQTEGGGSAVYLG
                     SQSGFQAVFYLTDPLKDSAAEAVRQLAGKNLTLHILSGDRETAVAETARALGVAHYRA
                     QAMPEDKLEYVKALQKEGKKVLMIGDGINDAPVLAQADVSAAAAGGTDIARDGADIVL
                     LNEDLRTVAHLLDQARRTRHIIRQNLIWAGAYNIIAVPLAVLGYVQPWIAALGMSFSS
                     LAVLGNALRLHKRGKMQSEKMPSEQ"
     gene            complement(9910..11088)
                     /gene="hflX"
                     /locus_tag="ACJJDE_000685"
     CDS             complement(9910..11088)
                     /gene="hflX"
                     /locus_tag="ACJJDE_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009347253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HGG7540650.1"
                     /translation="MTGRTGGNGSTQAQPERVMLVGVMLDKDGTGSSAARLNGFQTAL
                     AEAVELVKAAGGDSVRVETAKRDRPHTALFVGTGKAAELSEAVAADGIDLVVFNHELT
                     PTQERNLEKELKCRVLDRVGLILAIFARRARTQEGRLQVELAQLSHLAGRLIRGYGHL
                     QSQRGGIGMKGPGETKLETDRRLIAHRINALKKQLANLKKQRALRRKSRESGTIKTFA
                     LVGYTNVGKSSLFNRLTKSGIYAKDQLFATLDTTARRLYISPECSIILTDTVGFVSDL
                     PHKLISAFSATLEETAQADVLLHVVDAAAPNSGQQIEDVENVLQEIHAGDIPCIKVYN
                     KTDLLPSEEQNTGIWRDAAGKIAAVRISVAENTGIDALREAIAESCAAAPNTDETEMP
                     "
     gene            complement(11093..12373)
                     /locus_tag="ACJJDE_000686"
     CDS             complement(11093..12373)
                     /locus_tag="ACJJDE_000686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HGG7540651.1"
                     /translation="MKSLFIRLLLLGSAAGVFYHTQNQSLPAGELVYPSAPQIRDGGD
                     ALHYLNRIRAQIGLHKLAHAPVLENSARRHASYLTLNPEDGHGEHHPDNPHYTAQKLT
                     EHTRLAGYLYNGVHENISTEEEAAESSDSDIRTQQRQVDGLMSAIYHRLSLLDRHTDE
                     AGAAFVRENGKTVLVFNQGNGRFERHCAQGRNQPEAGRKYYRNACHNGAVVYTDEAMP
                     AQELLYTAYPVGSGALPYFHGERPDPVPEYEITGNPASIDFSEAAGKITMKSFKLYQG
                     KNEIRPVRVLTAGNDPNGRLTAYQFALFPLKPLEYGTLYTAVFDYVRNGRRAQAKWQF
                     RTRKPDYPYFEVNGGETLAVRKGEKYFIHWRGRWCLEACTRYTYRQRPGSRLSIGRHE
                     AGGIVFSVDGMAGSRITLAPEGETERGVTLYLQD"
     gene            12375..12503
                     /locus_tag="ACJJDE_000687"
     CDS             12375..12503
                     /locus_tag="ACJJDE_000687"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540652.1"
                     /translation="MPSSRRGNGVFYQNGKLANAVSDCRLPNRQTFPRADAEPDAV"
     gene            complement(12526..13251)
                     /locus_tag="ACJJDE_000688"
     CDS             complement(12526..13251)
                     /locus_tag="ACJJDE_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HGG7540653.1"
                     /translation="METQNKPTVTDIDRPILVPPGGHKKVLLHSCCAPCSGEVMEAML
                     ASGIDYTIYFYNPNIHPHKEYMLRKEENVRFAEKFGIPFIDKDDDYENDRKEWFAKAK
                     GMEFEPERGIRCTMCFDMRFEKAAQYAHEHGFPVFTSSLGISRWKNMAQINDCGHRAA
                     APYDDVVYWDFNWRKGGGSARMIEISKRENFYQQEYCGCAYSLRDSNAHRKSQGRIPI
                     KLGVLYYGDESTQYEPAPIRVDK"
     gene            complement(13324..14001)
                     /gene="radC"
                     /locus_tag="ACJJDE_000689"
     CDS             complement(13324..14001)
                     /gene="radC"
                     /locus_tag="ACJJDE_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HGG7540654.1"
                     /translation="MSIKQWPEGERPREKLLERGAAALSDAELLAILLRVGTRGMSAV
                     DLARYLLQEFGSLGRLMSAEVGKLSAYKGMGTASFTQFAVVREIGRRILAEELQESIV
                     LSDPDTVADYLRFHLGQEKVEVSVALLLNRQNQLIAVRELSRGTVAENTIYIREIVKL
                     ALDEYADSLIIAHNHPGGSPEPSQEDIMFTRRLAQAMSLVDVSLLDHFIVTSQSVCSF
                     RQLGLMP"
     gene            14028..14150
                     /locus_tag="ACJJDE_000690"
     CDS             14028..14150
                     /locus_tag="ACJJDE_000690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540655.1"
                     /translation="MPSETDVPTRQISEMPSEPDFRFRRHLYFKTVLRRFFQLD"
     gene            complement(14124..15473)
                     /gene="gshA"
                     /locus_tag="ACJJDE_000691"
     CDS             complement(14124..15473)
                     /gene="gshA"
                     /locus_tag="ACJJDE_000691"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HGG7540656.1"
                     /translation="MKLPVMSPEHSAQLQAFEAKILSNHAKIEAWFRTQWSVHCPPFY
                     GSVDIRNAGYKISSIDMNLFPGGFNNLNPNFIPLAAVAAQDAVQRACETAKSVLIIPE
                     NHTRNTFYLQNVYALGEILRSAGYEVRLGSLNPEVTEPTEFETALGDKILLEPLLRTR
                     DRVHLADGFSPCVVLLNNDLSAGIPDILKGISQTVLPPLHGGWTTRRKTNHFGAYNQV
                     TAEFAKLIGIDEWQINPYFEKIGGLDFQGREGEDALAEAVERVLAKIQAKYDESGITD
                     KPFVIVKADAGTYGMGVMSVKSADEVRGLNRKNRNKMAKVKEGLEVSEVIVQEGIYTY
                     ETLNGAVCEPVVYMMDRFVIGGFFRVHEGRGADENLNAGGMVFVPLSNSIPTGNGDNS
                     QEAPEACKRVFEQWDSLGMPRSEKDCDVDNEHNRLYVYGVMARLSLLAASIELEETA"
     gene            15733..17142
                     /gene="leuC"
                     /locus_tag="ACJJDE_000692"
     CDS             15733..17142
                     /gene="leuC"
                     /locus_tag="ACJJDE_000692"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HGG7540657.1"
                     /translation="MTAQTLYDKLWNSHVVREEEDGTVLLYIDRHLVHEVTSPQAFEG
                     LKMAGRKLWRIDSVVSTADHNTPTGDWDKGIQDPISKLQVDTLDKNIKEFGALAYFPF
                     MDKGQGIVHVMGPEQGATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHTMATQCI
                     TAKKSKSMLISVDGKLKAGVTAKDVALYIIGQIGTAGGTGYAIEFGGEAIRSLSMESR
                     MTLCNMAIEAGARSGMVAVDQTTIDYVKDKPFAPEGEAWDKAVEYWRTLVSDEGAVFD
                     KEYRFNAEDIEPQVTWGTSPEMVLDISSKVPNPAEETDPVKRSGMERALEYMGLEAGT
                     PLNEIPVDIVFIGSCTNSRIEDLREAAAIAKDRKKAANVQRVLIVPGSGLVKEQAEKE
                     GLDKIFIEAGFEWREPGCSMCLAMNADRLTPGQRCASTSNRNFEGRQGNGGRTHLVSP
                     AMAAAAAVTGRFTDIRMMA"
     gene            17239..17493
                     /locus_tag="ACJJDE_000693"
     CDS             17239..17493
                     /locus_tag="ACJJDE_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540658.1"
                     /translation="MNKLFITALSALALSACAGTWEGAKQDTARNLDKTQAAAERAAE
                     QTGNAVEKGWDKTKEAVKKGGNAVGRGISHLGGKIENATE"
     gene            17555..18196
                     /gene="leuD"
                     /locus_tag="ACJJDE_000694"
     CDS             17555..18196
                     /gene="leuD"
                     /locus_tag="ACJJDE_000694"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HGG7540659.1"
                     /translation="MKAFTKITAIVAPLDRSNVDTDAIIPKQFLKSIKRSGFGPNAFD
                     EWRYLDHGEPGMDNSKRPLNPDFSLNQPRYQGAQILLTRKNFGCGSSREHAPWALDDY
                     GFRAVIAPSFADIFFNNCYKNGLLPIVLTEEQVDRLFKEVEANEGYRLSIDLAGQTLT
                     TPGGETLAFDITEHRKHCLLNGLDEIGLTLQHADEIHAFEEKRRQSQPWLFNG"
     gene            18365..19636
                     /locus_tag="ACJJDE_000695"
     CDS             18365..19636
                     /locus_tag="ACJJDE_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7540660.1"
                     /translation="MQQIKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAAL
                     EVLKQNYPDEVPYGDITKIETGDIPDFDILLAGFPCQAFSFAGKRLGFEDTRGTLFFD
                     VARILKAKKPKGFILENVEGLVTHDRKDPTQKIGRTLTVILETLETLGYYVSWKVLNA
                     KDFGIPQNRKRIYLTGSLKSKPDLSFETTLSPKLKNILESGLPTESSPFIKKLLKKFP
                     PSELYGKSVKDKRGGKNNIHSWDIELKGTVTEEEKQLLNMLLKERRKKKWASEIGIDW
                     MDGMPLTKAQISTFYKHPNLQNILDSLTDKGYLVLEHPKQKIGGRRIKDESLPKGYNI
                     VSGKKSFEINKILDPNDVAPTLVAMDMEHLFVVDNGGLRTLTGKEGLRLFGYPDDYSF
                     DIPKKDKYDLLGNTVAVPVIKAVSERLLHTL"
     gene            19652..20383
                     /locus_tag="ACJJDE_000696"
     CDS             19652..20383
                     /locus_tag="ACJJDE_000696"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009036 - type II site-specific
                     deoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0090304 - nucleic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NgoBV family restriction endonuclease"
                     /protein_id="HGG7540661.1"
                     /translation="MVKLTAQQIFDKLLNEEKILSVNGQIRFFLGDVDIIVKQKDVVG
                     NIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNASPGFDIA
                     DFKMYSDEIIHKPYMLDVDYLIFGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINLQ
                     VKKGVVHKIRPGVWYSINKKNMPMFECLEDFVSAIEETVYQNPATRHNASLWKKKFEE
                     AYKKHYNRSISIPRWHEIAHKYKKK"
     gene            20417..21487
                     /gene="leuB"
                     /locus_tag="ACJJDE_000697"
     CDS             20417..21487
                     /gene="leuB"
                     /locus_tag="ACJJDE_000697"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - L-leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HGG7540662.1"
                     /translation="MTKHIAILRGDGIGPEIVAETVRVLDKLIAQGLDAGYEYAPLGG
                     EAYDEYGHPYPEFTQNLCRKADAVLLGAVGSPQYDNLDRPLRPERGLLAIRKDLNLFA
                     NLRPAVLYPELANASTLKPEIVAGLDILIVRELTGDIYFGEPRGIRVLENGEREGYNT
                     MKYSESEIRRIAHVAFQSAQKRSKKVCSVGKANVLETTELWREIFEEIGKEYPDVELS
                     HMYVDNAAMQLVRAPKQFDVIATGNIFGDILSDEASMLTGSIGMLPSASLDENGKGLY
                     EPSHGSAPDIAGQNKANPLATILSLAMLLRYSLNDEARAQQVENAVQKVLQQGLRTSD
                     IYEEGTKLVSCSEMGDAVLAAL"
     gene            21650..22213
                     /locus_tag="ACJJDE_000698"
     CDS             21650..22213
                     /locus_tag="ACJJDE_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HGG7540663.1"
                     /translation="MKKIIFAALAAAAISTASAATYKVDEYHANARFAIDHFNTSTNV
                     GGFYGLTGSVEFDQAKRDGKIDITIPIANLQSGSQHFTDHLKSADIFDAAQYPDIRFV
                     STKFNFNGKKLVSVDGNLTMHGKTAPVKLKAEKFNCYQSPMEKTEVCGGDFSTTIDRT
                     KWGMDYLVNVGMTKSVRIDIQIEAAKQ"
BASE COUNT         5402 a         5893 c         5810 g         5282 t
ORIGIN      
        1 ggcatttcca aagggcattt taagccgtat ttgagagaat gcggatggcg ttttcagtgt
       61 tttcagcgtg ataaaattca aatttctatt ttaaaacaat cagcaaagca ggatttattt
      121 cagttgtccg agacaacggg cggctgcacc gcctgcactc cccatacttt ttcaatgcac
      181 tcgagcagga gtgagacgtg gggattatcc tcgtattctt ccgcataaat gaaattgagc
      241 ggcatactgt ggcggcacga ttcgataata gccacgcccg cgccttcttt tgccgccgct
      301 tcggctttgt ttcccggcac cattgccaca cctataccgc ctgcaaccaa atcgataatg
      361 gtttgggggt agtcgcacaa gatctgtttt ttgggtgaga gccggttgct gcgccaaaac
      421 tggtgcaggt gcttcctact tccggacacg cccgacattt ctatccatac gcattcttgc
      481 aggctctgcg gaagggagcg ggtcagatgg ggatattggc tttgcgggca aatcagcgcg
      541 taggtcaggt tttgcaggaa tacgctgcgg atgccgcgtt gggcggcgtt gccgagtata
      601 aagccgccgt gcagggtttt gtgttggatg cgcgagagga tttcgccgct cattccgtat
      661 tggatgtgca ggcgcgtttt gggggctgtt tgaccgatat tgtccgtcag cgcgacgagt
      721 tttgccgaat cgatggggtg gataatgccc aaactggtct cttccgaata atcgcctgcc
      781 agcgttttgg caaaatgctc cagcttgtgt ttgtattgca gcagggattc cgcttcgggc
      841 aacagtattt cgcccgcccg cgtcaatacc atgcctttcc ccgtgcgcct gaacagcggc
      901 gtgccgacat attcttcaag ggctttaatt tgggcggaaa cggcaggctg ggaaaggaaa
      961 agtcgtttgg cggcttgggt aaggttgccc tcgtgcgcga cggcgacaaa tgattttaat
     1021 tgtacggcat ccatatatcc ctccttgtgc ggatgttttc tatatttgtg caatcgaaat
     1081 cttttaggtg gattgttgct gaaaattaac tttttaatca agtggtttgt aaattgtatc
     1141 agtttttcgg atgatgatta ttaaaaaaaa agattggttt tattgcctgt ttgggcttta
     1201 aatggggtga cggcttcctt tcggtggccc gaacgcagcc catatcaaaa agaaaagtca
     1261 tgcgcccctt ttgcgaggcg cgatatataa ggaggaagat tatggacaaa cataatggga
     1321 cttatcggga tttgcaccgt ccggcttcgg aatttgcgac gcgggacgaa tatttggaac
     1381 atgaattgca gattatgcaa ccaaaacgct ggcggcccaa cctgcccttt cgcgattacc
     1441 gcttcgagtg ggaggatttg attcctgcga tggcgggaac gattggaaaa gtggtgatgg
     1501 tgggggcggt ggcggcggcg tttgccgcac ctttggggct gcctgacagc tttgtactgg
     1561 aaaatgtgcg ctatgagctt ttaatcgccg ccgcgtttat cttattggta tcgggctttt
     1621 ttctgcccgg cgccaacctg cccggtacgc acgggccgct gattccgatg attcccatcg
     1681 ttgtgtcggc aggcgggcat cctttggcgt tcggcatttc gattgcggtt ttaggtctgc
     1741 tgatggcttt atttcgcggc ggcagtatta tggcgaagct gacaagcaac ggcgtatgcg
     1801 gcggattatt actctatttg ggctttatcg gcacgacggg gcaggtaaaa aaattgtttt
     1861 cgtgggcagg cggttttaat atgccctaca tcgcttttac cgtcattatt gtaacgattg
     1921 tgatgtacgc tttgttggag cattggaaaa aacgctggtt agccgtgcct ttgggatgct
     1981 tgattgccgg tgtggtggca tttgcattgg gtgcgccgtt tgagtttcac accgcccccg
     2041 gcctgcctcc aatgagtcct gcttattggt ggggtgaaaa cagcggctgg catctggggt
     2101 tgccgacggc agaaagtttt ttggttgtct ttccatttgc ggtattggct gttgcaatgt
     2161 ggtcgcccga ttttttagga catcaagtgt tccaaaaaat cagctatccg gaaaaaaccg
     2221 ataaggtatt gatgaatata gacgacacca tgacaagttg ttctgtccgt caagcagtgg
     2281 gttctatttt agggggtgca aattttacct cttcttgggg aacttatatc gtaccggcat
     2341 cgattgccaa acgccccatt ccgggcggtg cggttttaac ggcggtttta tgtattatcg
     2401 ccgggttatg gggctatccg atggacttgg cgatttggca gccggtattg agcgtagcct
     2461 tggtcgtagg cgtatactta ccgcttttgg aagcgggcat ggaaatgacg cgcaaaggca
     2521 aaaccaccca atccgccgcc atcgtggtgt tctcttccgc cttggtcaat ccggttttcg
     2581 gctgggcgtt gacgatgctg ttggataatt tgggcttaat cggctgcaaa gagcgcagtg
     2641 cgcaattagg tttcgccgga cgcgtgttga tacccgcagt aggtttcttg atcttgtgtg
     2701 tggcgatggg tgcggtcggg atgctgcccg gtatcccgcc gtttttggaa cacttcaaat
     2761 ctttgggcta ggctgaaatc ggaaatgccg tctgaaccgc tttcagacgg catttttgca
     2821 aacaggcaaa atgacggcgg cgggattttt tattttcccg attgaagtat aatgttgccg
     2881 ggcttcaacc ggatattcaa aacggtttgt tccaacactc ggaacggcgc ataaaacgcc
     2941 gcccttcgcg ttatcccgaa cggggcggct aatcagattc tatcgccata aaaggcgggg
     3001 tttcaaccga aaaggaattg agatgaataa aaccttgtct attttgccgg tggcaatctt
     3061 actcggcggc tgcgccgccg gaggcggtaa cacattcggc agcttagacg gtggcacagg
     3121 catgggcggc agcatcgtca aaatggcggt tgggagccaa tgccgtgcgg aattggacaa
     3181 acgcagcgaa tggcgtttga ccgcgctggc gatgagtgcc gaaaaacagg cggagtggga
     3241 aaacaagatt tgcgcttgcg tcgcccaaga agcacccgaa cggatgaccg gcaacgatgt
     3301 gatgcagatg ctggctccgt ccacgcgcaa tcaggcactt gccgccctga ccgccaaaac
     3361 ggtttccgcc tgcttcaaac acctgtaccg ctaaccttct tcagacggca tgaggcagat
     3421 gccgtctgaa gccgttttcc tgcaatttcg acagacgaga aaaatcatga aatacatcag
     3481 cacgcgcggc gaaaccgcac acaaaccgtt cagcgaagtt ttattgatgg ggcttgcccc
     3541 cgacggcggt ctgatgctgc cggaacatta tccgcaaatc gggcgcgaaa ccttggacaa
     3601 atggcgcggt tcggcttatc ccgaattggc gtttgaaatt atgcgcctgt tcgttacgga
     3661 tattccggag gacgatttgc gcgatattct gaaccgtact tacacggaag cggcgttcgg
     3721 tactaaggaa atcacccccg tccgcacgct ttcagacggc atcaaaatcc aagccttgtc
     3781 caacggcccg acgctggcgt tcaaagatat ggcgatgcag tttttgggca atgcgtttga
     3841 atatgtttta aacaaagaag gcaaaaaact caatatcttg ggcgcaacca gcggcgatac
     3901 gggttcggct gcggaatatg ccttgcgcgg caaaaaaggc gtgaacgtat ttatgttgtc
     3961 gcccgacggt aagatgagcg cgttccaacg cgcgcagatg tacagcctgc aagacgggaa
     4021 tatccacaat atcgccgtga agggtatgtt tgacgactgt caggatattg tgaaggcggt
     4081 gcagaacgat gccgcgttca aggaaaaata ccacatcggt acggtcaatt cgatcaactg
     4141 gggacgcatc gtcgcacaag tggtttatta ctttgcgggc tatttcaaag cgacacaaag
     4201 caatgacgag caagtcagct tctgcgtgcc gagcggcaac ttcggcaacg tttgcgcggg
     4261 acacatcgcc aaacagatgg gtttgcctat ccgccgcctg attgtcgcga ccaatgaaaa
     4321 cgatgtgttg gacgagtttt tcaaaaccgg tgcataccgc ccgcgcaaca gcgcgcatac
     4381 ttatgttacc tccagcccgt cgatggacat ttccaaagcg tccaacttcg agcgtttcgt
     4441 gttcgacctg atggatcgcg atcctcagga aatcaatacg ctgtgggcgg aagtagcggc
     4501 gggcaaaggc tttgacctgc ggtttgcttt agaaaaagtc ggtggcaaat acggttttac
     4561 ctccggcaaa tccacccacc ccgaccgcct cgccaccatc agacaggttt atgagcaaga
     4621 ccaagaactc atcgacccgc acactgccga cggcgtaaaa gtcgcccgcg aagtgcgcga
     4681 agaaggggaa acggttgtgt gtttggaaac cgcgttggca gcgaaattcg atgcgaccat
     4741 acgcgaagcc gtcggcgatg ccgccattcc gcgccccgcc gcgctggaag gtttggaaac
     4801 attgccgcag cgcgtgcaaa ccgtgccgaa cagtgcggat gcggtaaaag gcatcatcga
     4861 acaaaccctt gcctgatgtt ccgtatgggc ggcattccgt ccgaacttaa gattgaaaga
     4921 aaatgacctt acctatgcag gaaacccatt tttccatact gctggacgaa ctggcggcaa
     4981 aacaggaggc agccatcgcc ccccacctgc ttgccgacgg aaccaaggta tggatacgca
     5041 aagcaggcag gcacaatgcg cgatggcgtt acgcgctgct cggtatggtt gcccgatatt
     5101 tgaaactggg ggtgttgaag ccggttccca gcctcggcgg cgagcctgcc attgcaaccg
     5161 aatcaaaacg cctgtacgaa ttgcgcgcgg cggggatagc cgttcccgaa ttgctcgccg
     5221 tcaggaaaaa tgcccttatg ttcggaaatt tggaaggtat cccgctcgat acgcaaatcc
     5281 gccaagaagc cgaagccgga aaggcggacg cttggcttgc cggtttggaa gccattgcac
     5341 gcgtgcataa aaaacagcag ttcctcagtc aggcgtttgc gcggaatatg atgtcggacg
     5401 aggaaaacat cagctttttg gattttgaag acgacccttc cgaagtcctg accatagcgc
     5461 aatgccaagc ccgcgattgg ctctgctaca tccattcgac cgcgctgata ttgaaaaacg
     5521 gcggactgct ggaagcggct gcggaaaaat ggggcggcgt actgtctgag cagcctgccg
     5581 aaatacaaag gctgattgcc gccaccgtca aaccgatcct cccgatacgc aggctggaac
     5641 acccccgctg gggacgggac gcgctcaggc tggcagcctc gatttccctg atttcccttg
     5701 ccgatatacc gccataagcc gccgcccgcc ccgcgatgcc gtctgaagcc cttcagacgg
     5761 catataacca acgcgcatca agcattgtcg caaccatccg tttcgtttag aattttggct
     5821 ttatcccgaa tcgggcagac atttccactc tgccgcacgt cccgaacaag cactatccat
     5881 ttcttttact gacaggaaac ccaaatggca gcattcaata cccaaaaagt attgtccgta
     5941 caccactgga cagacgcata ttttaccttt acctgcaccc gcgacgaatc gttgcgcttt
     6001 gaaaacggac agttcgttat ggtcggattg atggtggacg gcaagccgct gatgcgtgca
     6061 tacagcgtcg cctccgccaa ctgggaagaa cacctcgaat ttttcagcat taaagtccaa
     6121 gacggcccgc tgaccagccg cctgcaacac ctcaaagtcg gcgacgacgt gttaatcagc
     6181 aaaaaaccga ccggaaccct ggttgccggc gacctgaatc cgggcaaaca cctttacttg
     6241 ttgagcaccg gtaccggcat cgctcctttc ttgagcatca ccaaagaccc cgaaatttac
     6301 gagcaatttg aaaaaatcat cctcgtacac ggcgtgcgct acaaaaaaga tttggcgtac
     6361 tacgaccgct ttaccaaaga attgcccgaa cacgaatacc tcggtgactt ggttaaagaa
     6421 aaactgattt actacccgat tgtttcgcgc gaagaattcg aacaccacgg tcgcctaacc
     6481 gacctgatgg tgagcggcaa actgtttgaa gacatcggcc tgcccaaaat caacccgcaa
     6541 gacgaccgcg ccatgctgtg cggcagcccc gcgatgctga aagatacctg caaagttttg
     6601 gacgatttcg gactgaccgt ctctccgaaa acaggcgtac gcggcgatta cctgattgag
     6661 cgtgcgtttg tagatcaata agctgtttga aaatcccgtc tgaacggcac cagcaatcaa
     6721 aaaccccgaa tcctgccaat caggattcgg ggtttttata gtgaattaaa tttaaatcag
     6781 gacaaggcgg cgaaccgcag acagtacaaa tagtacggca aggcgagcca acactgtacc
     6841 ggtttaaatt taattcacta tatagtgggt aaaaattaga aatgcacatt tccgtcattc
     6901 acgcgcaggc gggaatccag acctatccgt taattagcat ttgaaaataa aagaaaaacc
     6961 aagcatatgg attcccccct acgcgagact gacgacggtg ttctgcagta gccaaagcag
     7021 aaaaccatcc ttattgtcat ttcatcatga tataacaata aggatgttaa aaattagtta
     7081 tcattatatt catgatatat aagaaaaatt gtcccaataa gaaatgttat gcagaaaata
     7141 aaatgaaaag gatggttttc attgaaaatg gttgttctgc caccgtcata cacagaaccg
     7201 gtatttggaa aaaaaataat ccatattgac atcattattc catttatcgc ataaatccac
     7261 tttttaattt ttttcctcat taatacaatc tcttatttaa taaaatcaaa tacctagcaa
     7321 ttcgatctca aattttgaac gccaacgtgt ttgagcggta acaatacata ctttaagttt
     7381 gcaattcttc atcgtcttat ttttgttttc atcaactata cgtctaaagc aacgccgtcc
     7441 gtcattgttc ggacggcatt ttttcagact gcattttccc ccgtttgtga aggcgcaggg
     7501 cgttgcccaa aaccgccagc gaactgaagc tcatacccag tgcggctatc cacggttgga
     7561 catagcccaa aacggcaagc ggtacggcaa tgatattgta cgcgcccgcc catatcaggt
     7621 tttgccggat aatatggcgg gtgcgccgcg cctgatcgag caggtgggcg acggtacgca
     7681 aatcttcgtt caataacaca atgtccgcgc cgtccctcgc aatatccgtc ccgcccgctg
     7741 cggcggcgga tacgtctgcc tgcgccaaaa cgggcgcgtc gttgatgccg tcgcctatca
     7801 tcagcacttt tttcccttct ttttgcaagg ctttgacgta ttccagtttg tcctcgggca
     7861 tggcttgggc gcggtagtgc gcgacaccca gggcgcgtgc ggtttcggca acggcggttt
     7921 cgcggtcgcc gctgaggatg tgcagggtca ggtttttgcc tgccaactgc cgcaccgcct
     7981 ccgccgcgct gtctttcaag gggtcggtca ggtagaacac ggcttggaaa ccgctttgac
     8041 tgccgaggta aaccgcgctg ccgccgcctt ctgtttgcgg ttctttacct gaaatttcgg
     8101 cgacatagga tgccctgccc aatgcccaaa cctgtgtttc gccgttgacg gtcagttgcg
     8161 cgcccacgcc ttcgccgatg cggttgaggc gttgtttaat agcgatgtcg gggacgctgc
     8221 cgtctgaaat gcggcagttg aggatggcgc gggcaagggg atgttcggac tgttgttcta
     8281 aagcctgcgc caccgcgaga acaaaggctt cgtctgtgcc tctcaacaat gagatacggc
     8341 ggacggcggg tttgccttgg gtcagcgtgc cggttttgtc gaagatgatg tcggtggttt
     8401 gggcgagggt ttcgattgcc tgctttccgc cgattaaaat accttcgcgc gccagcgtac
     8461 cggtagaagc tgccagcgcg gtcggcgtgg caagcgataa ggcgcagggg caggtaatga
     8521 ccagcagggc gacggtaatc cacaatgcgg tgtgcgcgtc ggcgtacagc gtccagccga
     8581 tgaagacggg gacggcaagc aggagttcgc cgaatatgaa agacgaggcg tattgttccg
     8641 ccaactcggc agtgcgcggt ttttgcgcta aggcgcggtc gagcaggcgg acgatgtgcg
     8701 acagtcgcgt gccaccgccg gtgcggtcgg tgcgtataat cagggggctt tgcgtgttga
     8761 gtgtgccggc ggttactttt tcagacggca ttttggcgac gggcaggctc tcgccggtca
     8821 gcatagattc gttgacggca ctgcttcctt ccagcaccgt gccgtcaacg gggatggttt
     8881 cgcccggttt gaccagcacg atatcgcccg ctttcaattt gacgacagct gcctcgcagg
     8941 tttcctgcgt atcggggtaa tcgggcatat gatggcaaaa cgcaggaatc agcttcacca
     9001 gcctctcggc ggcatcgcct gccttacggc gggcaatgtg ttccataaag cgtccgccca
     9061 gcaggaaaaa cagcagcatc gcgatggatt cgaaatacat cccctgcccc gcatttgtcg
     9121 caaggctgta aacgccggcg ataaaggtca tgatgatggc gacggtaatc ggcgtatcca
     9181 tgccgacgcg gcggtttttc aagtcgcgca gcgcgccttg ataaaacggg acggcgcaat
     9241 agaatacgac gggcagcacc attaaaaagc cgccccaatg gaggatttgc aggaaatcgg
     9301 gttcgatgtc gccgccgtaa aggtaggtcg gcagcgcgaa catcatcgtc tgcatcatcc
     9361 ccagcccggc aacggcgagg cggacgatgt attgtttgcg ttctttttgg ttggcggctt
     9421 cgattttttg cgcgtcatag ggtgcggcgg tgtagcctat ctgcctgatt ttcaacagaa
     9481 tgtcggaaag gcggattttg ccgtcgtccc agacgacgcg gcagcggtgc gtgctgtaat
     9541 tgaggtcgat gcggacgatg ccgtctgtac gcaaaagctg ctgttcgatc agccagacgc
     9601 aggcggcgca ggtgatgccg ccgagcatta aaaccgcctc gcgcgtgccg ccgtgggttt
     9661 ccacaaagtc ggactggact tcgggcaggt cgtacaggcg gatttggtcg aggatttctt
     9721 ggggcggcag ctcggttttt tgcgcgtcgg cggtgcgttg tttgtaataa ctgcccaagc
     9781 ccgcgtcaat aatgctttgt gcgaccgcct gacagccggc gcagcaggtt tcgcggtctt
     9841 cgttttcgta acggacagtc aggtggaggt gttcgggaac atccagaccg cagtggaaac
     9901 aggttttttt catggcattt cggtttcgtc tgtgtttggt gcggcggcac aagactcggc
     9961 aatggcttcg cgcagtgcgt ctataccggt attttcagca acggaaatgc ggacggcggc
    10021 aatttttccc gcagcgtcgc gccatatgcc cgtgttttgt tcttcagacg gcagcaggtc
    10081 ggttttgttg tacaccttga tgcacggaat atcgccggca tggatttctt gcagtacgtt
    10141 ttccacgtct tcaatctgct gtccgctgtt cggagcggcg gcatcgacga cgtgcagcag
    10201 cacatcggct tgcgcggttt cttccagcgt ggcggaaaag gcggaaatca gtttgtgcgg
    10261 cagatcgctg acgaatccga cggtatcggt caggataatg ctgcattcgg gactgatgta
    10321 cagccgccgc gccgtcgtgt cgagtgtggc gaaaagctgg tctttcgcat atatgcccga
    10381 cttggtcagc cggttgaaca ggctggattt gccgacattg gtatagccga ccagcgcaaa
    10441 cgttttgatt gtgcccgatt cgcgggactt gcggcgcagg gcgcgctgtt ttttgaggtt
    10501 ggcaagctgt tttttcaagg cattgatccg atgggcgatc aatcggcggt cggtttccag
    10561 tttggtttcg ccggggcctt tcatgccgat accgccgcgc tggctctgca gatggccgta
    10621 accgcgtatc aagcgtcccg ccaaatggct caattgcgcc aactcgactt gcagcctgcc
    10681 ttcctgcgtg cgggcgcggc gagcgaaaat cgccagaatc agccctaccc tgtccaatac
    10741 gcggcatttc agttcttttt caaggttgcg ttcctgcgtg ggcgtgagtt cgtggttgaa
    10801 tacgaccaaa tcgatgccgt ctgcggcaac tgcttctgac agctccgccg ccttgcccgt
    10861 gccgacaaac agcgcggtgt gcggacggtc gcgtttggca gtctccacgc gcacggaatc
    10921 gccgcccgcc gctttgacca gctcgacagc ttccgccaat gccgtctgaa aaccgttcag
    10981 acgggcggca ctactgcccg taccatcttt gtccaacatt acgcccacca gcatgacgcg
    11041 ttcgggttgc gcttgggtac tgccgttgcc gcctgttctg cctgtcatgt attcaatcct
    11101 gtaaataaag ggttacgcct cgttccgttt ctccttccgg tgcaagcgtg atgcggctgc
    11161 ccgccattcc gtcaacgctg aagacgatgc cgcccgcctc gtgccttcct atggacaggc
    11221 ggctgccggg tcgctgccgg taggtataac gggtacacgc ttccaaacac cagcgtccgc
    11281 gccagtggat gaaatatttt tcgccttttc taaccgcaag tgtctcgccg ccgtttacct
    11341 caaaataagg gtaatcgggt tttcgggttc taaactgcca tttcgcctgc gctcgccgtc
    11401 cgttgcggac atagtcgaat accgccgtat aaagcgtgcc gtattccaaa ggcttgagcg
    11461 gaaaaagcgc gaattggtac gcggtcagcc tgccgttggg gtcgttgccg gcggttaaaa
    11521 ccctgacggg gcggatttcg tttttaccct gatacagctt gaaacttttc atcgtaattt
    11581 tgcctgccgc ctcggaaaaa tcaatgctgg caggattgcc cgtgatttca tattccggca
    11641 cggggtctgg acgctcgccg tggaaataag gcagtgcgcc gctgccgacg ggataggctg
    11701 tatagagcag ctcctgtgcg ggcatggctt cgtcggtgta cacgaccgca ccgttatggc
    11761 aggcgttgcg gtaatatttc cgtcctgctt ccggctgatt tctgccttgg gcgcaatgcc
    11821 gctcaaacct gccgttgccc tgattgaata cgagaacggt tttaccgttt tcgcgcacaa
    11881 atgccgctcc tgcctcatcc gtatggcggt caagtaggga aaggcggtgg tagattgcgc
    11941 tcattaatcc gtccacttgg cgttgctgcg tgcggatgtc gctgtcggac gattcggcgg
    12001 cttcttcttc cgtgctgatg ttttcatgca cgccgttgta gagatacccg gcaaggcgtg
    12061 tgtgttcggt cagcttttgt gcggtgtagt gcggattgtc gggatggtgt tcgccgtgtc
    12121 cgtcttcggg attgagcgtg aggtagcttg cgtgcctgcg ggcggagttt tccaaaaccg
    12181 gcgcgtgtgc cagcttgtgc aaaccgattt gggctcggat gcggttgagg tagtgcagcg
    12241 catcgccgcc gtccctgatt tgcggtgcgg acggatagac aagttcgccc gcgggcaggg
    12301 attggttttg ggtatggtag aaaacgcctg ccgccgaacc caacaggagc agccgaataa
    12361 aaagggattt cataatgccg tcctcccgac gcggcaacgg ggtgttttat caaaacggca
    12421 aacttgccaa tgcggtttcc gattgcagat tgccaaaccg gcaaaccttt ccccgtgccg
    12481 atgccgaacc cgatgccgtc tgaaccttca gacggcatcg ggtgtttatt tgtccacccg
    12541 gatgggggca ggttcgtatt gtgtcgattc gtcgccgtaa tacagcacgc cgagtttgat
    12601 ggggattctg ccctgtgatt tgcggtgggc attggaatcc ctcagggaat aggcacaacc
    12661 gcaatattcc tgctggtaga agttttcacg tttgctgatt tcaatcatgc gcgcgctgcc
    12721 gccgcctttg cgccagttga aatcccaata caccacatca tcgtaaggcg cggcggcgcg
    12781 gtgtccgcag tcgttgattt gcgccatatt tttccagcgt gaaatgccca gcgaactggt
    12841 aaagacgggg aacccgtgtt catgcgcgta ttgcgccgcc ttttcaaaac gcatatcgaa
    12901 acacatggtg cagcggatgc cgcgttccgg ctcaaactcc atgcctttgg ctttggcaaa
    12961 ccattctttg cggtcgtttt cgtagtcgtc gtctttatcg atgaaaggaa tgccgaactt
    13021 ttccgcaaag cgcacgtttt cctcttttcg gagcatatac tctttgtgcg gatggatatt
    13081 gggattgtaa aaataaatgg tgtagtcgat gccgctggcc agcatggctt ccatcacttc
    13141 gccgctgcac ggggcgcagc aggaatgcag caagactttt ttatgtccac cgggcgggac
    13201 gagtataggg cggtcaatgt cggtaacggt aggtttgttt tgtgtttcca ttaacttaac
    13261 aatatctgtt gaatacggtt gaagcggcta ttttatcaga gccgccgcat gtaaaacaga
    13321 gtgtcagggc atcaacccga gctgtctgaa cgaacagacg ctttgcgagg taacgataaa
    13381 atggtcgagc agcgacacat cgaccagcga cattgcctgt gccagccgcc ttgtgaacat
    13441 gatgtcttcc tgcgaaggtt cgggcgagcc gcccggatgg ttgtgcgcaa taatcaggct
    13501 gtcggcatat tcgtccaatg ccagtttgac gatttcgcgg atgtaaatcg tgttttccgc
    13561 aaccgtaccg cgcgacagct ctctgaccgc aatcagttgg ttttggcggt tcagcagcag
    13621 cgcgacgctg acttcgactt tttcctgccc caaatgaaag cgtaaataat cggccaccgt
    13681 atccggatcg gacaggacga tgctctcctg caattcttcc gccaatatcc gccgcccgat
    13741 ttccctgacc acggcaaact gtgtgaaact tgccgtcccc atccctttgt atgccgacag
    13801 tttgccgacc tccgcgctca tcagcctccc caaactgccg aactcctgca gcaaataacg
    13861 cgccaaatcg accgcactca ttccgcgcgt gccgacgcgc agcaggattg ccaaaagttc
    13921 ggcatcactc aacgccgccg ccccgcgttc caacagcttt tccctgggtc tttcgccttc
    13981 cggccattgc ttgatgctca tgttttccct tttttaaata gtctgagatg ccgtctgaaa
    14041 cagatgttcc cacacgccaa atatccgaaa tgccgtctga accggatttc cgcttcagac
    14101 ggcatctgta tttcaaaaca gtcttacgcc gtttcttcca actcgattga agccgccaga
    14161 agcgacaggc gtgccattac gccgtaaacg tagaggcggt tgtgttcgtt gtccacgtcg
    14221 cagtcttttt cagagcgcgg catacccagc gagtcccatt gttcgaatac gcgcttgcag
    14281 gcttcgggcg cttcttggga attatcgccg ttaccggtag gaatgctgtt agacagcgga
    14341 acaaacacca taccgccggc gttgaggttt tcgtccgcac cgcgcccttc gtgtacgcgg
    14401 aaaaagccgc cgatgacgaa gcggtccatc atatacacga cgggttcgca caccgcgccg
    14461 tttaaggttt cataagtata aatcccttct tggacaatca cttcgctgac ttccaagcct
    14521 tctttgactt tcgccatttt attgcggttt ttacggttca atccgcgcac ttcgtcggcg
    14581 gatttgacgc tcatcacgcc catgccgtaa gtgccggcat cggctttgac gatgacgaaa
    14641 ggtttgtcgg taatgcccga ttcgtcgtat ttggcttgaa ttttcgccag cacacgttct
    14701 accgcttccg ccaacgcgtc ttcgccttca cgcccttgga agtccaaacc gccgattttt
    14761 tcaaaataag ggttaatttg ccattcgtcg atgccgatta acttggcaaa ttcggcggta
    14821 acttggttgt acgcgccgaa atgatttgtt ttgcggcgcg tcgtccaacc gccgtgcaac
    14881 ggcggcaaaa cggtttggct gatgcctttg aggatgtcgg gaatgccggc ggacaaatcg
    14941 ttgttcaaca aaaccacgca aggcgaaaag ccgtctgcaa gatggacgcg atcgcgggta
    15001 cgcaataaag gttccaacag gattttgtcg cccaatgcgg tttcaaattc ggtcggttcg
    15061 gttacttccg gattcaggct gcccaagcgc acttcatacc ctgccgaacg caaaatctcg
    15121 ccgagggcgt aaacgttttg caggtaaaac gtattgcgcg tgtggttttc aggaataatc
    15181 aatacggatt tcgccgtttc gcaggcgcgt tgcaccgcat cttgcgcggc aaccgccgcc
    15241 agcgggataa agttgggatt cagattattg aagccgccgg ggaacaaatt catatcgata
    15301 gacgaaattt tgtaaccggc attgcgtata tcgaccgaac cgtaaaacgg cgggcagtgt
    15361 acgctccact gcgtgcggaa ccacgcctcg attttggcgt gattggacag gatttttgcc
    15421 tcaaacgcct gaagttgcgc cgaatgttcg ggcgacatca ccggtaattt catctttcgt
    15481 ctgcctctgt gtgttttttg acaagatgca gatgataatg cctttgaaag aatgacgaca
    15541 agtattcttt cgtatcgaat catgctttag atataactgc ttactgaaat ggacaatatg
    15601 tctaattttt ttgttaaaat tgtttacaaa ataacaccga ctcaaaaatt agacaaaatc
    15661 tgttgcgcgg tataaagaat acgtctaaaa tccgcccaat ccgcattacc atttatccaa
    15721 aagaacaaca tcatgacagc acaaaccctc tacgacaaac tttggaacag ccacgtcgtc
    15781 cgcgaagaag aagacggcac cgtcctgctc tacatcgacc gccatttggt gcacgaagtt
    15841 accagccctc aggcatttga aggcttgaaa atggcggggc gcaagctgtg gcgcatcgac
    15901 agcgtcgtct ccaccgccga ccacaacacc ccgaccggcg attgggacaa aggcatccaa
    15961 gacccgattt ccaagctgca agtcgatact ttggacaaaa acattaaaga gtttggcgca
    16021 ctcgcctatt ttccgtttat ggacaaaggt cagggcatcg tacacgttat gggccccgaa
    16081 caaggcgcga ccctgcccgg tatgaccgtc gtctgcggcg actcgcacac ttccacccac
    16141 ggcgcattcg gcgcactggc gcacggcatc ggcacttccg aagtcgagca caccatggcg
    16201 acccaatgta ttaccgcgaa aaaatccaaa tccatgctga tttccgttga cggcaaatta
    16261 aaagcgggcg ttaccgccaa agacgtggcg ctctacatca tcgggcaaat cggcacggca
    16321 ggcggtacag gctacgccat cgagtttggc ggcgaagcca tccgcagcct ttctatggaa
    16381 agccgcatga ctttatgcaa tatggcgatt gaggcaggcg cgcgctcagg catggttgcc
    16441 gtcgaccaaa ccaccatcga ctacgtaaaa gataaaccct tcgcacccga aggcgaagcg
    16501 tgggacaaag ccgtcgagta ctggcgtacg ctggtgtctg acgaaggtgc ggtattcgac
    16561 aaagaatacc gtttcaacgc cgaagacatc gaaccgcaag tcacttgggg tacctcgcct
    16621 gaaatggttt tagacatcag cagcaaagtg ccgaatcctg ccgaagaaac cgatccggtc
    16681 aaacgcagcg gtatggaacg cgcccttgaa tacatgggct tggaagccgg tacgccatta
    16741 aacgaaatcc ccgtcgacat cgtattcatc ggctcttgca ccaacagccg catcgaagac
    16801 ttgcgcgaag ccgccgccat cgccaaagac cgcaaaaaag ccgccaacgt acagcgcgtg
    16861 ttaatcgtcc ccggctccgg tttggttaaa gaacaagccg aaaaagaagg cttggacaaa
    16921 attttcatcg aagccggttt tgaatggcgc gaaccgggct gttcgatgtg tctcgccatg
    16981 aacgccgacc gcctgacccc ggggcaacgc tgcgcctcca cctccaaccg taactttgaa
    17041 ggccgtcaag gcaacggcgg acgtacccac ctcgtcagcc ccgctatggc agcagcagcc
    17101 gccgttaccg gccgctttac cgacatccgc atgatggcgt aagtattttc aggcggtctt
    17161 taagaatttg acgcggccgt ctgaaatatg tcccgtaagg cagaaacacc tttaatattc
    17221 aaaccaagga gtttaaccat gaacaaactt ttcattaccg ccctgtccgc cctcgccttg
    17281 tccgcctgcg ccggcacttg ggagggcgcg aaacaagaca ccgcccgcaa ccttgacaaa
    17341 acacaggccg ccgccgaacg cgccgccgaa caaacaggca acgccgtcga aaaaggctgg
    17401 gacaaaacca aagaagccgt caaaaaaggc ggcaatgccg tcggacgcgg catttcccat
    17461 ctcggcggaa aaatcgaaaa cgccaccgaa taaccgattc gcgatgccgt ctgaaaccgc
    17521 ttcagacggc atcgtcagca caagacgcaa acccatgaaa gcctttacca aaattaccgc
    17581 catcgtcgcc ccgctcgacc gcagcaacgt cgataccgac gccatcatcc ccaaacaatt
    17641 tttaaaatcc atcaaacgca gcggcttcgg ccccaatgcc tttgacgaat ggcgttacct
    17701 cgaccacggc gaaccaggca tggacaacag caaacgcccg ttgaaccctg atttctcgct
    17761 gaaccagccg cgttaccaag gcgcgcaaat cctgttgacg cgtaaaaact tcggttgcgg
    17821 ctcttcacgc gaacacgccc cttgggcatt ggacgactac ggcttccgcg ccgtcatcgc
    17881 ccccagcttc gccgacatct tctttaacaa ctgctacaaa aacggccttt tgcctatcgt
    17941 gttgaccgaa gaacaggttg accggctttt caaagaagtt gaagccaacg aaggctaccg
    18001 gctctccatc gaccttgccg ggcaaaccct gaccaccccc ggcggcgaaa cattagcatt
    18061 cgacattacc gaacaccgca aacactgcct cttaaacggc ttggacgaaa tcggactgac
    18121 cctgcaacac gccgatgaaa ttcacgcctt tgaagaaaaa cgccgccaaa gccagccttg
    18181 gctgtttaac ggttaaacct atgccgtctg aagaccgttc agacggcatt cctgataaca
    18241 tataattgct gcaactaatg taaacagagg ggctataaat tgctttcatc tttcaagcgg
    18301 gcttagcaac gctctaaatt aatgcaatac agctctattt caaataaatt tttagatttt
    18361 taatatgcaa cagattaaat ttattgactt attttccggg atgagcggta tcaggaaagg
    18421 atttgaacaa gcctgtcgga aacagtcggt tgcttgcgaa tgtgttttta cctcagaaat
    18481 caaaccggca gctttggaag tattgaagca aaactaccct gatgaagtgc cgtatggaga
    18541 tataacgaaa attgaaacgg gagatattcc cgattttgac atcttgttgg caggcttccc
    18601 ttgccaggct ttttctttcg ccggaaaaag attgggcttt gaagatacgc ggggaacgct
    18661 tttctttgat gtggcaagga ttttaaaggc aaaaaaacca aaaggtttta ttttggaaaa
    18721 tgtggaagga ttggtgacgc acgatagaaa agatccgaca caaaaaatag gacgcaccct
    18781 gaccgttatt ttggaaacct tggaaacatt gggctactat gtttcttgga aagttttaaa
    18841 tgcaaaagat ttcggcattc cccaaaacag gaagcgcatt tatctgacag gcagtttgaa
    18901 atccaaaccc gacttatctt ttgaaacaac cctaagtccg aaattaaaaa atattttgga
    18961 atcgggactg cctaccgaaa gcagtccttt catcaaaaaa ttgctaaaga aatttccccc
    19021 gtccgaactg tacggaaaat cagtaaagga caaacgggga gggaaaaaca atatccacag
    19081 ttgggatatt gaattaaaag gcacagtaac cgaagaagag aagcaattat taaatatgct
    19141 tctaaaagaa cggaggaaga aaaaatgggc ttcagaaatc ggcatcgatt ggatggatgg
    19201 gatgcctttg acaaaagcgc aaatttcaac tttctataaa caccccaatc ttcaaaatat
    19261 tttggacagc ctgacagata aaggctattt ggttttggag catccgaaac aaaaaattgg
    19321 cgggcgaaga atcaaagatg aatccctgcc caaaggctac aatattgttt caggaaaaaa
    19381 atcatttgaa atcaataaaa tattagaccc aaatgatgtt gcgccaacct tagttgcaat
    19441 ggatatggag caccttttcg tcgttgacaa cggcggtttg cgcacactta ccggaaaaga
    19501 aggtttacgc ttattcggct atccggacga ttattcgttt gatattccta aaaaagacaa
    19561 atacgattta ttgggcaata ccgttgccgt tcctgtgatt aaggcggtat ctgaaaggct
    19621 tctgcatact ttataaaccg atagggataa aatggtaaaa cttactgcac aacaaatatt
    19681 tgataagttg ctgaatgagg aaaaaatctt atcggtcaat ggtcaaatta gatttttctt
    19741 gggcgatgtg gatattatcg tcaaacaaaa agatgtcgtc ggcaacatca ttcaggaatg
    19801 gctcggcgga tggttgagaa aaagggaaat tgaatttgat gtttcaacca atacccaaat
    19861 gccccccgat ttctttttaa ataaaaaaga ccgcagtaga gaattgttgg aagtaaaggc
    19921 gttcaaccga aatgccagtc cgggttttga tattgcagat tttaaaatgt attctgatga
    19981 aatcattcat aaaccctata tgctggatgt agattattta atattcggtt acgatatgga
    20041 cgacaacggc aatgtaacca tcaaggattt atggcttaaa aaagtatggc aaattacgag
    20101 aagcatggat gggtgggcaa ttaatcttca agtcaaaaaa ggcgtggtgc ataaaatccg
    20161 cccgggtgtt tggtacagca taaataaaaa gaatatgcct atgtttgaat gcttggaaga
    20221 ttttgtttcc gcaattgaag aaaccgttta tcaaaacccg gcaacacggc ataacgcatc
    20281 cttatggaaa aagaaatttg aggaagccta taaaaaacac tacaaccgat cgatttccat
    20341 acctcgttgg cacgaaattg cacacaaata caaaaagaaa taacccttca accatcaacc
    20401 cataaggaaa cttgaaatga ccaaacatat cgccatcctc cgaggtgacg gcatcggtcc
    20461 cgaaatcgtc gccgaaaccg tccgcgtact cgacaaactc atcgcccaag gtttggatgc
    20521 cggctacgaa tacgccccat tgggcggcga agcctatgac gaatacggtc atccttatcc
    20581 cgaatttacg caaaacctct gccgcaaagc cgatgccgtc ctgcttggtg cagtcggttc
    20641 tcctcaatac gacaacctcg accgtccgtt gcgccctgag cgcggcctgt tggcaatccg
    20701 taaggatttg aacctgtttg ccaatttgcg tcctgctgtt ttatatcccg aattagccaa
    20761 cgcctccacg ctgaagcctg aaatcgttgc cggtttggat attttgattg tgcgcgaact
    20821 caccggcgac atctatttcg gcgaaccgcg cggcatccgc gttctggaaa acggcgaacg
    20881 cgaaggctac aacaccatga aatacagcga aagcgaaatc cgccgtattg cccatgttgc
    20941 cttccaatcc gcccaaaaac gcagcaaaaa agtctgttcc gtaggcaaag ccaacgtttt
    21001 ggaaaccacc gaattgtggc gcgaaatctt tgaagaaatc ggcaaagagt accctgatgt
    21061 cgagctttcc catatgtacg tcgacaacgc cgccatgcag ctcgtgcgtg cgcccaaaca
    21121 attcgacgtc attgccaccg gcaacatctt cggcgacatt ctctccgacg aagcctccat
    21181 gctgaccggc tccatcggta tgctgccttc cgcctcgctg gacgaaaacg gcaaaggcct
    21241 gtacgaaccg tctcacggct ccgcccccga catcgccgga caaaacaaag ccaacccgct
    21301 ggccaccatc ctctcgctcg caatgttgct gcgttacagc ctgaacgacg aagcgcgcgc
    21361 gcaacaagtt gaaaacgccg tccaaaaagt gctgcaacaa ggcttgcgta ccagcgacat
    21421 ttacgaagaa ggcacaaaac tcgtttcctg ctccgaaatg ggcgatgcgg tactcgccgc
    21481 cttgtaaaaa aacaaagcgc ggatcacacc gcgctttttc atccgccctt ttccgcccgc
    21541 cccgttcgtc aaccgcctgc aaacccaccg tttaccggca ggaaatgcca taaatccctg
    21601 cctatgttag gataaacgcc tttaccggcc cacacaaagg attatcatca tgaaaaaaat
    21661 catcttcgcc gcactcgcag ccgccgccat cagtactgcc tccgccgcca cctacaaagt
    21721 ggacgaatat cacgccaacg cccgtttcgc catcgaccat ttcaacacca gcaccaacgt
    21781 cggcggtttt tacggtctga ccggttccgt cgagttcgac caagcaaaac gcgacggtaa
    21841 aatcgacatc accatcccca ttgccaacct gcaaagcggt tcgcaacact ttaccgacca
    21901 cctgaaatca gccgacatct tcgatgccgc ccaatatccg gacatccgct ttgtttccac
    21961 caaattcaac ttcaacggca aaaaactggt ttccgttgac ggcaacctga ccatgcacgg
    22021 caaaaccgcc cccgtcaaac tcaaagccga aaaattcaac tgctaccaaa gcccgatgga
    22081 gaaaaccgaa gtttgtggcg gcgacttcag caccaccatc gaccgcacca aatggggcat
    22141 ggactacctc gttaacgttg gtatgaccaa aagcgtccgc atcgacatcc aaatcgaggc
    22201 agccaaacaa taaatcttga tgcgaatcag cacaaatgcc gtctgaacgt ccttcaaacg
    22261 gcatttgtgc cgtcttcatc aaaccgcccc gccaacggta agccgatatg gcggagcaca
    22321 atccgccgaa agatatttca gcggcaggca gggcttgccg gaaagtccgg aaagtatagt
    22381 ggattaa
//
LOCUS       DBBZXU010000021        22132 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.021, whole genome shotgun sequence.
ACCESSION   DBBZXU010000021 DBBZXU010000000
VERSION     DBBZXU010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 22132)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22132)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22132
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.021"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            36..587
                     /locus_tag="ACJJDE_000699"
     CDS             36..587
                     /locus_tag="ACJJDE_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540664.1"
                     /translation="MKVLNGWSDRKMWRVLSALPIGVVFFDLIYGFVLNILQGLDLQR
                     AVPDSEGVLAVTPDIAFNSLQIVANGGMAAVVCFGLAVVFLLNRSVRRRQVLEIGVFR
                     MLGLVAVLAFSAPSVWEWANALPLLLKGADVVNTGNARYVLTALCMPFPAVSCVIGLV
                     GRFRLQTASGRAAKAGGAVKAGG"
     gene            complement(853..1544)
                     /locus_tag="ACJJDE_000700"
                     /pseudo
     CDS             complement(853..1544)
                     /locus_tag="ACJJDE_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
     gene            complement(1803..2522)
                     /locus_tag="ACJJDE_000701"
     CDS             complement(1803..2522)
                     /locus_tag="ACJJDE_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540665.1"
                     /translation="MLAIYSINILIYNEKMFFRVTLYFVKNFVSFSKTRKSNEMMQKH
                     KCLIDFILTVASQIAYADLPLSLEELLTDKGKFKLESSISYINTERNQSEFANPIYVQ
                     TSATKIATVMAMMITPVMAQNLDSQVFDSQNVKAIQLSQAEMKETQGEFVPIIAAAAF
                     GGALGTWGYHGANLYNHGKLGTAQGAATAAGIGAATGVAATGLAAAAGGGLAGNLAWR
                     PGIHALGFGANAANNAVNSRK"
     gene            complement(2649..2807)
                     /locus_tag="ACJJDE_000702"
     CDS             complement(2649..2807)
                     /locus_tag="ACJJDE_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540666.1"
                     /translation="MKTPLPICTLSALAACTLSGQGGSRVYGEIKARDLCVTAPILLS
                     AFCLACSR"
     gene            complement(2804..3646)
                     /locus_tag="ACJJDE_000703"
     CDS             complement(2804..3646)
                     /locus_tag="ACJJDE_000703"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7540667.1"
                     /translation="MLVCNPYEVVIHGTTSSGKIFRPSDWAERLCGILSSFTKDNRLS
                     YSKWVRPMLVDNIRCVAVDKKLETDNPQMFRFLMDFAADNDLRVIDCKALLEEREQGG
                     QNDPTDERVLLAQAIEEKHAAEKAQEQTVSGASYVLREIGADDTATAFAALSVLRSAL
                     TDINRFTEQINKVQRPQGYRLLGIFEEGKHNAVAVCGFREACTLAGGRHIHIDDIVTL
                     PQSRRKGYASRLLEEVRKIGAETGVTKIHLNVHVNHDRADAHRLYFKNGFEICAYHFR
                     CDPK"
     gene            3882..4802
                     /gene="pyrB"
                     /locus_tag="ACJJDE_000704"
     CDS             3882..4802
                     /gene="pyrB"
                     /locus_tag="ACJJDE_000704"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004070 - aspartate carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HGG7540668.1"
                     /translation="MPNPLYRQHIISISDLSREQLECLLQTALKLKAHPRGDLLEGKL
                     IGSCFFEPSTRTRLSFETAVQRLGGKVIGFSDGANTSAKKGETLADTARIISGYTDAI
                     IQRHPKDGAARVAAEFSRVPVINAGDGTNQHPSQTLLDLVTIYETQGRLDKLKIAMAG
                     DLKYGRTVHSLCQALKRWGCEFAFVSPPSLAMPDYITEELDEAGCRYRILGSLEEAAE
                     WADILYMTRVQRERFDEQEFAKIQGKFNLEASMLAHAKPNLRVLHPLPRVDEIHPDVD
                     ATPHAYYFEQATNGVYARMAILSLVLNEEV"
     gene            4812..5270
                     /gene="pyrI"
                     /locus_tag="ACJJDE_000705"
     CDS             4812..5270
                     /gene="pyrI"
                     /locus_tag="ACJJDE_000705"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009347 - aspartate carbamoyltransferase
                     complex [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HGG7540669.1"
                     /translation="METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVG
                     FNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDNFKVVQKRHLNLPDEI
                     AEVFRCPNTNCAGHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA"
     gene            5335..6000
                     /locus_tag="ACJJDE_000706"
     CDS             5335..6000
                     /locus_tag="ACJJDE_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540670.1"
                     /translation="MMMHASVQSRFAPILYVLIFFAGFLTAQIWFNQKAYTEELPPLL
                     SALSAVALVWLAWAFVSARSKAKAEKFYREKMIQNESIHPVLHASLQHLEHKPQMLAL
                     LVKNHGKGMAEQVRFKAEVLPDDEDARTIAAELAKMDMFALGTDAVASGETYGRVFAD
                     IFELSAALEGRAFKGMLKLTAEYKNIFGDACRSETALELGALNQALQEISKTSEKSKR
                     IFY"
     gene            complement(6063..7280)
                     /locus_tag="ACJJDE_000707"
     CDS             complement(6063..7280)
                     /locus_tag="ACJJDE_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7540671.1"
                     /translation="MQRRIITLLCAAGMAFSTQTLAANLEVRPNAPERYTVKQGDTLW
                     GISGKYLYSPWQWSRLWDANRDQIHNPDLIYPDQVLVLRHVDGEPRLGLEQTDGIPVV
                     KMSPDKEVSGYGIPAIDVNFYRIFMRHPQIVSRKETAAAPRLLSGPEGRLLYTKGTRV
                     YTKGLKEPGRYLTYRINKNITDPDTGKFLGQEVAFSGIVRSLDYTDSALEQRSKQAGE
                     RLKDNEYHTRTHPLITPLRTPSIQPLVVETAISEIQQGDYLMKMPEDTDRFNMMPHEP
                     SRPVQAKIVSVFEGTRIAGQFQTITIDKGEADGLDKGTVLSLYKRKKTMQVDLSNNFK
                     SRDTVELISTPAEEVGLAMVYRTSEHLSSAIILENISDISVGDTAANPGRDLDNIPDQ
                     GRSRVKFGFNRSE"
     gene            7464..7967
                     /gene="def"
                     /locus_tag="ACJJDE_000708"
     CDS             7464..7967
                     /gene="def"
                     /locus_tag="ACJJDE_000708"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HGG7540672.1"
                     /translation="MALLNILQYPDERLHTVAKPVEQVDERIRKLIADMFETMYESRG
                     IGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDTVT
                     RAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLK
                     KRQKHTI"
     gene            8054..8980
                     /gene="fmt"
                     /locus_tag="ACJJDE_000709"
     CDS             8054..8980
                     /gene="fmt"
                     /locus_tag="ACJJDE_000709"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0071951 - conversion of methionyl-tRNA to
                     N-formyl-methionyl-tRNA [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HGG7540673.1"
                     /translation="MKVIFAGTPDFAAAALKAVAAAGFEIPLVLTQPDRPKGRGMQLT
                     APPVKQAALELGLRVAQPEKLRNNAEALQMLKEVEADVMVVAAYGLILPQEVLDTPKH
                     GCLNIHASLLPRWRGAAPIQRAIEAGDAETGVCIMQMDIGLDTGDVVSEHRYAIQPTD
                     TANEVHDALMEIGAAAVVADLQQLQSKGRLNAVKQPEEGVTYAQKLSKEEARIDWSES
                     AAVIERKIRAFNPVPAAWVEYQGNPMKIRRAEVVAQQGAAGEVLSCSADGLVVACGEN
                     ALKITELQPAGGRRMNIAAFAAGRHIEAGTKL"
     gene            9059..10318
                     /gene="rsmB"
                     /locus_tag="ACJJDE_000710"
     CDS             9059..10318
                     /gene="rsmB"
                     /locus_tag="ACJJDE_000710"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HGG7540674.1"
                     /translation="MSMALAQKLAADSIAAVAEGRNLQDVLAQIRTAHPDLMAQENGA
                     LQDIAYGCQRYLGSLKHMLAQMLKKPIGNPQLESLLLAALYQLHYTRNAPHAVVNEAV
                     ESIAKIGRGQYRSFANAVLRRFLRERDKLVASCKKDDVAKHNLPLWWVAYLKNHYPKH
                     WHNIAAALQSHPPMTLRVNRRHGNAESYLEKLVAEGIAAKALDEYAVTLEEAVPVNRL
                     PGFSDGIVSVQDFGAQQAAYLLNPKDGERILDACAAPGGKTGHILELADCRVTALDID
                     AGRLKRVEDNIARLGFQTASTACADAQDLSAWYDGKPFDAVLADVPCTASGVARRNPD
                     VKWLRRPTDALKTARQQEALLDALWQVLKSGGRMLIATCSVFVEENDGQLQKFLNRHA
                     DAELIESRVLLPNKHQDGFYYALIQKH"
     gene            10284..10883
                     /locus_tag="ACJJDE_000711"
     CDS             10284..10883
                     /locus_tag="ACJJDE_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4390 domain-containing protein"
                     /protein_id="HGG7540675.1"
                     /translation="MAFITRLFKSIKQWLVLLPMLSVLPDAAAEGIDVSRAEARITDG
                     GQLSISSRFQTELPDQLQQALRRGVPLNFTLSWQLSAPIIASYRFKLGQLIGDDDNID
                     YKLSFHPLTNRYRVTVGAFSTDYDTLDAALRATGAVANWKVLNKGALSGAEAGETKAE
                     IRLTLSTSKLPKPFQINALTSQNWHLDSGWKPLNIIGNK"
     gene            10883..13003
                     /locus_tag="ACJJDE_000712"
     CDS             10883..13003
                     /locus_tag="ACJJDE_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7540676.1"
                     /translation="MRRFLPIAAICAVVLLYGLTAATGSTSSLADYFWWIVAFSAMLL
                     LVLSAVLARYVILLLKDRRDGVFGSQIAKRLSGMFTLVAVLPGVFLFGVSAQFINGTI
                     NSWFGNDTHEALERSLNLSKSALNLAADNALGNAVPVQIDLIGAASLPGDMGRVLEHY
                     AGSGFAQLALYNAASGKIEKSINPHKLDQPFPGKARWEKIQRAGSVRDLESIGGVLYA
                     QGWLSAGTHNGRDYALFFRQPVPKGVAEDAVLIEKARAKYAELSYSKKGLQTFFLATL
                     LIASLLSIFLALVMALYFARRFVEPVLSLAEGAKAVAQGDFSQTRPVLRNDEFGRLTK
                     LFNHMTEQLSIAKEADERNRRREEAARHYLECVLEGLTTGVVVFDEQGCLKTFNKAAE
                     QILGMPLTPLWGSSRHGWHGVSAQQSLLAEVFAAIGAAAGTDKPVHVKYAAPDDAKIL
                     LGKATILPEDNGNGVVMVIDDITVLIHAQKEAAWGEVAKRLAHEIRNPLTPIQLSAER
                     LAWKLGGKLDEQDAQILTRSTDTIVKQVAALKEMVEAFRNYARSPSLKLENQDLNALI
                     GDVLALYEAGPCRFAAELAGEPLMVAADTTAMRQVLHNIFKNAAEAAEEADVPEVRVK
                     SEVGRDGRIVLTVCDNGKGFGREMLHNAFEPYVTDKPAGTGLGLPVVKKIIEEHGGRI
                     SLSNQDAGGACVRIILPKTVKTYA"
     gene            12996..14273
                     /locus_tag="ACJJDE_000713"
     CDS             12996..14273
                     /locus_tag="ACJJDE_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HGG7540677.1"
                     /translation="MRSSDILIVDDEIGIRDLLSEILQDEGYSVALAENAEEARKLRH
                     QARPAMVLLDIWMPDCDGITLLKEWAKNGQLNMPVVMMSGHASIDTAVEATKIGALDF
                     LEKPISLQKLLSAVENALKYGAAQTETGPVFDKLGNSAAIQEMNREVEAAAKRTSPVF
                     LTGEVGSPFETVARYFHKNGTPWVSPARVEYLIDMPTELLQKAEGGVLYVGDIAQYSR
                     NIQTGIAFIIGKAERCRVRVVASGSRAAGSDGIACEEKLAELLSESVVRIPPLRMQHE
                     DIPFLIQGIACNVAESQKIAPASFSEEALAALTRYDWPGNFDQLQSVVATLLLEADGQ
                     EIGAGAVSSLLGQNVPAEGAEDMVGGFNFNLPLRELREEVERRYFEYHIAQEGQNMSK
                     VAQKVGLERTHLYRKLKQLGIGVSRRAGEKTEE"
     gene            14364..15551
                     /gene="dprA"
                     /locus_tag="ACJJDE_000714"
     CDS             14364..15551
                     /gene="dprA"
                     /locus_tag="ACJJDE_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
                     /protein_id="HGG7540678.1"
                     /translation="MTEDERFAWLQLAFTPYIGAESFLLLLRRFGSASNALSAPAEQV
                     APAVRHKQAAEAWRNAEKRASARQAAEAALEWEMRDGCRLMLLQDEDFPEMLTQGLTA
                     PPVLFLRGNVRLLHKPSAAIVGSRHATPQAMRIAKDFGKSLGGQNIPVVSGMASGIDT
                     AAHQGALEAEGGTIAVWGTGIDRIYPPSNKNLAYEIAEKGLIVSEFPIGTRPYAGNFP
                     RRNRLIAALSQVTLVVEAALESGSLITAGLAAEMGREVMAVPGSIDNPHSKGCHKLIK
                     DGAKLVECLDDILNECPGLLQNTGASSYSINKDTPDTGSRAVQTAYAPPPAAKMPSEG
                     AAGGTAVGGILDKMGFDPIHPDVLAGQLAMPAADLYAALLELELDGSVAAMPGGRYQR
                     IRT"
     gene            15577..16038
                     /locus_tag="ACJJDE_000715"
     CDS             15577..16038
                     /locus_tag="ACJJDE_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 family protein"
                     /protein_id="HGG7540679.1"
                     /translation="MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMM
                     MEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIH
                     ALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN"
     gene            16110..18416
                     /gene="topA"
                     /locus_tag="ACJJDE_000716"
     CDS             16110..18416
                     /gene="topA"
                     /locus_tag="ACJJDE_000716"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HGG7540680.1"
                     /translation="MAKNLLIVESPSKAKTLKKYLGGDFEILASYGHVRDLVPKSGAV
                     DPDNGFAMKYQLISRNGKHVDAIVAGAKEAENIYLATDPDREGEAISWHLLEILKSKR
                     GLKNIKPQRVVFHEITKNAVLDAVAHPREIEMDLVDAQQARRALDYLVGFNLSPLLWK
                     KIRRGLSAGRVQSPALRLICERENEIRAFEAQEYWTVHLDSHKGRSKFTAKLAQYNGA
                     KLEQFDLPNEAAQADVLKELEGKEAVVTAIEKKKRSRNPAAPFTTSTMQQDAVRKLGF
                     TTDRTMRTAQQLYEGIDVGQGAIGLITYMRTDSVNLADEALTEIRHYIENKIGKEYLP
                     SAAKQYKTKSKNAQEAHEAIRPTSVYRTPESVKPFLSADQFKLYQMIWQRTVACQMTP
                     AKFDQTTVDITVGKGVFRVTGQVQTFAGFLSVYEESSDDEEGEDSKKLPEMSEGDKLP
                     VDKLYGEQHFTTPPPRYNEATLVKALEEYGIGRPSTYASIISTLKDREYVTLEQKRFM
                     PTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQLDEIADGKRQWIPLMDKFWKPFIKQVE
                     EKEGIERAKFTTQELDETCPKCGEHKLQIKFGKMGRFVACAGYPECSYTRNVNETAEE
                     AAERIAKAEAEQAELDGRECPKCGGRLVYKYSRTGSKFIGCANYPKCKHVEPLEKPKD
                     TGVQCPQCKKGNLVERKSRYGKLFYSCSTYPDCNYATWNPPVAETCPKCAWPVLTIKT
                     TKRWGVEKVCPQKECGWKEQIEPPAPKE"
     gene            complement(18494..18763)
                     /locus_tag="ACJJDE_000717"
     CDS             complement(18494..18763)
                     /locus_tag="ACJJDE_000717"
                     /inference="COORDINATES: protein motif:HMM:NF015639.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HGG7540681.1"
                     /translation="MIASSEPFPCSACGLCCQKVNLSEQTIYLDRGDGTCRHFDDSTR
                     LCTIYETRPLVCRVEDYYHHYLSEQMSWQDFIQINIEVCKQFQSE"
     gene            complement(18760..19179)
                     /locus_tag="ACJJDE_000718"
     CDS             complement(18760..19179)
                     /locus_tag="ACJJDE_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540682.1"
                     /translation="MGKIQILNKLPTKNPATIPFDAASNSFFRILEARNEYKKIAAQE
                     KTKREVIGAWRDVRLAELKNQQEILRLYLENTFKERRKMIDGLFEALDKGMEAGNIHV
                     IDTAINGIVSIAKDSPLKQVDNLIAALKNDNVKVIDF"
     gene            complement(19179..20126)
                     /locus_tag="ACJJDE_000719"
     CDS             complement(19179..20126)
                     /locus_tag="ACJJDE_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540683.1"
                     /translation="MAIPVLLWGAAAALAATGIVKGAAALSDIDDAKEIGERAERRYK
                     RRKRELNSTKDETNLAFEELGQFKVDIFNNQIRHIVQVLNNTSNKHAKSELSGFNSTF
                     DIAELKEMETMVQTSLELSTNLGSSAITGALAGFGVYGAVPMIATASTGTAISTLSGA
                     AATNATLAWLGGGSLAAGGFGMAGGMVALGGIVAGPALAIGGFMLASKAEEALTEARA
                     YSAEIDEAIDEMDLITEGLEGLKENAREIRHTLEEMVKRFEKVRVDHADHPDFHTMLV
                     IGKAIKNLLNTPIMEEDGSPVANIRHQCEGCLNIELGTV"
     gene            20283..20660
                     /locus_tag="ACJJDE_000720"
     CDS             20283..20660
                     /locus_tag="ACJJDE_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiprotein-bridging factor 1 family protein"
                     /protein_id="HGG7540684.1"
                     /translation="METHEKIRLMRELNKWSQEDMAEKLAMSAGGYAKIERGETQLNI
                     PRLEQLAQIFKIDMWDLLKSGGGGMVFQINEGDSGGDIALYASGDVSMKIEFLKMELK
                     HCKEMLEQKDKEIELLRKLTETV"
     gene            20749..21318
                     /gene="rsmD"
                     /locus_tag="ACJJDE_000721"
     CDS             20749..21318
                     /gene="rsmD"
                     /locus_tag="ACJJDE_000721"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HGG7540685.1"
                     /translation="MAAGKHTKHSNQVRIIGGQCRGRKLSFASANGLRPTPDSVREKL
                     FNWLGQDLTGKTVLDLFGGSGALGIEAASRNAKRVLISDNNRQTVQTLQKNSRELGLG
                     QVQIVCSDGIAYLKTVSEQFDVVFLDPPFAWQDWQILFDALKPCLNPRAFVYLEAGRL
                     PDIPDWLTEYREGKSGQSTFELRVFQVAE"
     gene            21441..21692
                     /locus_tag="ACJJDE_000722"
     CDS             21441..21692
                     /locus_tag="ACJJDE_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhL family 4Fe-4S dicluster ferredoxin"
                     /protein_id="HGG7540686.1"
                     /translation="MSLFITDECINCDVCEPECPNDAISQGEEIYEINPNLCTQCVGH
                     YDEPQCQQVCPVDCILIDEEHPETHDELMAKYEKIIQFK"
     gene            21789..21872
                     /locus_tag="ACJJDE_000723"
     tRNA            21789..21872
                     /locus_tag="ACJJDE_000723"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21823..21825,aa:Tyr,seq:gta)
     gene            21903..21976
                     /locus_tag="ACJJDE_000724"
     tRNA            21903..21976
                     /locus_tag="ACJJDE_000724"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21935..21937,aa:Gly,seq:tcc)
     gene            21986..22060
                     /locus_tag="ACJJDE_000725"
     tRNA            21986..22060
                     /locus_tag="ACJJDE_000725"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:22018..22020,aa:Thr,seq:ggt)
BASE COUNT         5433 a         5609 c         6076 g         5014 t
ORIGIN      
        1 tattttttgt tcggcggctt gcgtggtcgg gtaaaatgaa agttttgaac ggttggtcgg
       61 acaggaagat gtggcgggtt ttgagtgctt tgccgatagg cgtggtgttt tttgatttga
      121 tctacggttt tgtgttgaat atcttgcagg gtttggattt gcagcgtgcc gtgccggatt
      181 cggaaggcgt gttggcggtt acgcccgata ttgcattcaa cagtttgcag attgtcgcca
      241 acggcggtat ggcggcggtg gtctgtttcg ggttggcggt tgtgtttctg ctcaaccgtt
      301 cggtgcggcg gcggcaggtg ttggaaatcg gggtgttccg gatgttgggg ctggtggcgg
      361 tgttggcgtt cagtgcgccg tcggtgtggg agtgggcgaa cgcgctgccg ctgctgctga
      421 agggcgcgga cgtggtcaat acggggaatg cgcgttatgt gctgacggct ttgtgtatgc
      481 cctttccggc ggtgtcgtgc gtcatcgggc tggtggggcg gttcaggctt cagacggcat
      541 cgggcagggc ggcaaaggca gggggtgcgg tcaaggcggg cggatagggc gcatttttca
      601 gcgggtgcgt cgagaagcag ccgatgtgtt tggcagccgc agcttggggg ggtgtagtgc
      661 taatggcggt ttctttgctt ttatagtgga ttaacaaaaa ccagtacggc gttgcctcgc
      721 cttagctcaa agagaacgat tctctaaggt gctgaagcac taagtgaatg ggtttcgtac
      781 tatttgtact gtctgcggct tcgtcgcctt gtcctgatta ctatataaaa taaatgggca
      841 aaaatcggtt tattatcgtt tttgccgcat ttggatttgt tctaccgtaa aacgtgtttg
      901 acgaacggga ttcttattaa aaaacatctg atttctaaca aaatcagtat tttttggcac
      961 gatggctaaa atttttcctt ccatttcgcc atcacgtgtt ttccatgcgc tcaagaattg
     1021 tgatttgctc attgagacgt gccccagcga tggatcagcc agcaaaacag tttctccgtt
     1081 aataccgttc aataccgaaa aatggttgtt tttacggtat tttaaataca caattacagg
     1141 aatttttagt tgtaccaact gttcaaatgg caaagcataa ccttgtgctt caaaacccag
     1201 ttcgggcatt atgcgttgca tatcatcaaa agaagcacgc atttgggttt tatccatttt
     1261 gtctaagatt tccgcttcag aataatgtct gccataaaaa ttattcagta acgtggcaat
     1321 cgaagccgcg ccgcaagaaa aatccaaatc ttgttttact atgccggaat ctcgccgtgc
     1381 tttccaactt cgtacatgga tgttttggta agaagcgggg ggtcaacaaa cataggccaa
     1441 gcaaaaacta tatttggggc gaaaccaatc aaagccgcat aatttatcaa tttataaaga
     1501 ttttttatca taatatgtat acgcggaata aacgcatgaa acataaaaaa ataaaatcat
     1561 atgcaatttt attgcatgaa taaatatgaa taaaatagat aatgatggga gtaaatacgc
     1621 catgtatttt ggaagtttaa atttattaat aataaaataa tttatcgtag cgcaaataaa
     1681 tcccaaaatt ggaacgatta gaaaaaaaat taatacaccc atcatcatgc aaactctata
     1741 ttaagaaata gctaactaat gctattgtgg aaattagtta gctaactaaa agttattaat
     1801 gattattttc gagaattgac tgcattatta gcagcattgg caccaaaacc tagtgcatga
     1861 atacccggtc tccatgccaa attcccagcc aatccgcctc cggcagcagc agccagccct
     1921 gttgccgcta ctcctgttgc cgcaccgatt cctgccgcag tagccgcgcc ttgcgcagtt
     1981 cctaatttac catgattata caaattagca ccatgatacc cccatgtacc taatgcaccg
     2041 ccaaaagcag cggctgcaat aatgggaaca aattcacctt gtgtttcttt catttcagcc
     2101 tgtgataatt gaattgcttt cacattttgg ctgtcaaaaa cttggctgtc taaattttgc
     2161 gccattacag gtgtaatcat catagccatt acagttgcaa ttttcgttgc gctggtttgc
     2221 acataaatag gattagcaaa ttcgctttga ttgcgttcag tgttgatgta gctaatactg
     2281 ctttctagtt tgaatttacc cttgtcagtc aataattctt ccaaacttaa aggtaagtca
     2341 gcataagcaa tttggctggc aacagtcaaa ataaaatcta ttagacattt gtgtttttgc
     2401 atcatttcgt ttgattttct agtttttgag aatgatacaa agttttttac aaagtaaaga
     2461 gtcactctga aaaacatttt ttcattataa atcaaaatat tgatagaata aatagcgagc
     2521 atcgattcac ggtgtacttt agtgcaaagc gtacaacgcg agcctgaacc accagccgca
     2581 acaggaaaag aaagccgata gagtgcaatg cttgccaacg tgcaagcgag cttgcaagaa
     2641 cgcttggctc aacgagagca ggcaagacag aaagcagaaa gcaggatagg agcggtaacg
     2701 caaaggtctc gggctttgat ttcgccgtaa accctgctgc cgccttgtcc ggaaagggtg
     2761 caggcggcga gtgccgacag ggtgcagatg gggagggggg ttttcatttg gggtcgcaac
     2821 ggaagtggta tgcgcagatt tcaaaaccgt ttttgaaata caggcggtgc gcgtcggcac
     2881 ggtcgtggtt gacgtggacg ttgaggtgga ttttggttac ccctgtttcc gcgccgattt
     2941 tgcggacttc ttccaaaagg cgcgaggcgt agcctttgcg gcggctttgc ggcagggtaa
     3001 cgatgtcatc gatgtggatg tggcggccgc cggcgagggt gcaggcttcg cggaagccgc
     3061 agacggcgac ggcgttgtgt ttgccttctt caaaaatgcc cagcaggcgg tagccttggg
     3121 ggcgttggac tttgttgatc tgttcggtaa agcggttgat gtcggtcagg gcggaacgca
     3181 aaacgctcaa ggctgcaaag gcggtggcgg tgtcgtccgc gccgatttcg cgcaaaacgt
     3241 aggatgcgcc cgagacggtc tgttcctgtg ctttctcggc ggcgtgtttt tcttcgattg
     3301 cctgtgccag caggacgcgc tcgtcggtag ggtcgttttg tccgccctgt tcgcgttctt
     3361 cgagcagggc tttgcagtcg atgacgcgca ggtcgttgtc ggcggcaaag tccatcagga
     3421 agcggaacat ctgggggttg tcggtttcca gttttttatc gacggcgacg cagcggatgt
     3481 tgtccaccag catggggcgc acccatttcg agtaggaaag cctgttgtct ttggtaaacg
     3541 aggacagaat gccgcacagg cgttccgccc agtcgctggg acggaaaatc ttgccggaac
     3601 tcgttgtgcc gtggatgacg acttcgtagg ggttgcagac taacatggcg gcttcctgaa
     3661 aagaaatgtc tggcgcgatt atacctgatg cttatgcggg cgtgtttgga tatgccgtct
     3721 gaaaagtacg ggattcgtgc ggtaaaactt tgcggcggca aatgtgcgat aatacgcgcc
     3781 gtattgccgc ttttgcgaag ctgttccgca aacactcggg cggcgtggac gtataaccgg
     3841 atgcccgcct gacgcgggtt ttttacggaa ggggggcaaa aatgcctaat ccgctttaca
     3901 gacagcacat catctccatt tcggatttgt cgcgcgaaca gttggaatgc ctgcttcaga
     3961 cggcattgaa gctgaaggcg catccgcgcg gcgatttgtt ggaaggcaaa cttatcggtt
     4021 cgtgcttttt cgagccgtcc acgcgcacga ggctgtcgtt tgaaacggcg gtgcagcggc
     4081 tgggcggcaa ggtcatcggc ttttcggacg gcgcgaatac cagtgccaaa aaaggcgaga
     4141 cgcttgccga taccgcccgc atcatttccg gctacaccga cgcaatcatc caacgccacc
     4201 ccaaagacgg cgcggcgcgc gtggcggcgg agttttcgcg cgtccccgtc atcaacgccg
     4261 gcgacggcac gaaccagcat cccagccaga ctttgttgga tctggtaacg atttatgaaa
     4321 cgcaggggcg tttggacaag ctcaaaatcg ccatggcggg cgacttgaaa tacgggcgca
     4381 ccgtgcattc gctttgtcag gcgttgaaac gctggggctg cgaatttgcc tttgtttcgc
     4441 cgcccagcct cgcgatgccc gactacatta ccgaagagtt ggacgaagcc ggctgccgat
     4501 accgtatcct cggcagtttg gaagaggcgg cggaatgggc ggacatcctg tatatgaccc
     4561 gcgtccagcg cgaacgtttc gatgaacagg aatttgccaa aatccaaggc aaattcaacc
     4621 tcgaagcgtc tatgctcgcc cacgccaaac cgaacctgcg cgtgctgcac cctttgccgc
     4681 gcgtggacga aatccatccc gatgtcgatg ccacgccgca tgcctattat ttcgagcagg
     4741 caaccaacgg cgtttatgcg cgtatggcga tattgtcgct ggtgttgaac gaagaagtgt
     4801 gaggaaccga tatggaaacc ccgaaactca gtgtcgaagc cattgaaaaa ggtacggtta
     4861 tcgaccatat tcccgctggc agggggctga ccatcctgcg ccagttcaaa cttttgcact
     4921 acggcaacgc agtaaccgtg ggcttcaacc tgcccagcaa aacccaaggc agcaaagaca
     4981 tcatcaaaat caaaggcgtg tgcttggacg acaaagccgc cgaccgcctt gccctgtttg
     5041 cacccgaagc agtggtcaac accatcgaca atttcaaggt tgtgcagaaa cggcatttga
     5101 acctgcccga cgaaatcgcc gaagtgttcc gctgtccgaa cacgaattgc gccggccacg
     5161 gcgagccggt caaaagccgg ttttatgtta aaaaacacaa cgggcagacg cggctgaaat
     5221 gccattactg cgaaaaaacc tacagccggg attcggtggc ggaagcctga cggattccct
     5281 taaaccgagc gggcggcatt tcgtctgccg cttgttttgc caatctgaaa tggaatgatg
     5341 atgcacgctt ctgtccaaag ccgtttcgca ccgatacttt atgttttgat tttctttgcc
     5401 ggttttttga ccgcgcaaat ctggttcaat cagaaagcct atactgaaga gctgcctccg
     5461 cttctgtccg cattgtccgc tgtcgcgctg gtgtggctgg cgtgggcgtt cgtgtcggcg
     5521 cgttcaaagg ctaaggcgga aaagttctac cgcgaaaaaa tgatacagaa cgaaagcata
     5581 caccccgtcc tgcacgcttc tttgcaacac ttggaacaca agccgcaaat gctcgccctg
     5641 ctggtcaaaa accacggcaa agggatggcg gaacaggtca ggttcaaggc ggaagtgctg
     5701 cccgacgacg aagacgcgcg cacgattgcc gccgagttgg caaaaatgga tatgtttgca
     5761 ttggggacgg acgcggtcgc ctcgggcgaa acctatggac gcgtgttcgc cgatattttc
     5821 gagttgtcgg cggctttgga agggcgcgcg ttcaaaggaa tgttgaaact gacggcggaa
     5881 tataaaaaca tcttcggcga tgcctgccgt tcggaaacgg cgttggagtt gggcgcgctc
     5941 aatcaggcgt tgcaggagat ttcaaaaaca tcggaaaagt ccaaacggat attttattga
     6001 agatggaaaa atgccgtctg aaacggaagg tgtttcagac ggcatttttg tcggatgatt
     6061 aattattcgg agcggttgaa gccaaacttc acgcggctgc ggccctgatc cggtatattg
     6121 tccaaatcgc gtcccggatt ggcggcggtg tcgcctacgg aaatatcgga gatgttttcc
     6181 aaaatgatgg cggacgacag gtgttcggag gtgcggtaaa ccattgccaa gcccacttct
     6241 tcggcaggag tggaaatcag ctcgacggta tccctgcttt tgaaattgtt ggagaggtcg
     6301 acctgcatcg ttttcttgcg tttgtagagg ctcaaaaccg tgcctttgtc caaaccgtcc
     6361 gcctcgcctt tgtcgatggt gatggtttga aactggccgg caatccttgt gccttcaaac
     6421 acggaaacga ttttagcctg aaccgggcgg gacggttcgt gcggcatcat gttgaagcgg
     6481 tcggtgtctt ccggcatttt catcaggtag tcgccctgct gtatttcgga aatggcggtt
     6541 tcgaccacca gcggctgtat cgaaggggtg cgcagcgggg taatcaaagg atgggtgcgg
     6601 gtatggtatt cgttgtcttt cagccgttct ccagcctgtt tcgagcgttg ttcgagggcg
     6661 gagtcggtat agtcgaggga gcgcacgatg ccgctgaatg cgacttcctg cccgaggaat
     6721 ttacccgtat ccggatcggt gatgttttta ttgattcggt aggtcaggta gcggcccggc
     6781 tctttcaggc ctttggtgta aaccctggtg cctttggtgt acagcagcct gccttccggg
     6841 cccgagagca ggcgcggcgc ggcagcggtt tctttgcggg aaacgatttg cggatgccgc
     6901 ataaagatgc ggtagaagtt gacatcgatg gcgggaatac cgtatccgga cacttcctta
     6961 tccggactca ttttgacgac ggggatgccg tctgtctgtt ccaagccgag gcgcggttcg
     7021 ccgtcaacgt ggcgcaacac caatacctgg tccggataaa tcaggtcggg attgtggatt
     7081 tgatcccggt tcgcgtccca caggcggctc cattgccacg ggctgtacag gtatttgccc
     7141 gaaatgcccc acagggtgtc gccctgtttg accgtgtagc gttccggcgc gttcgggcgc
     7201 acctccaaat ttgccgccaa agtttgtgtt gagaatgcca tacctgccgc gcagagcagg
     7261 gttataatac gacgttgcat aaccgttccc cttatctgat aaatttcggt ttgtcttgct
     7321 tgattgggtt ggaaaaagcg gcggcagccc ctcgggatgt gccgcgtgat aaaaaatgtt
     7381 ccgcatttta acatcgaatt atccgcacca tcacggtaat tatgaaaaac aggcggcgta
     7441 tccgccgaag gaaagagaaa attatggctt tattgaatat cttgcaatat cccgacgagc
     7501 gtctgcacac ggtggcaaag cctgtcgaac aagtcgacga gcgcatccgg aagctgattg
     7561 ccgatatgtt tgaaacgatg tacgaatcgc gcggcatcgg gctggcggcg acgcaggtcg
     7621 atgtgcacga gcgcgtggtc gtgatggatt tgaccgaaga ccgcagcgaa ccgcgcgtgt
     7681 tcatcaaccc cgtcatcgtt gaaaaagacg gcgaaaccac ttacgaagag ggctgcctgt
     7741 ccgtgccggg catttacgac accgtaaccc gcgccgaacg cgtcaaggtc gaggctttga
     7801 acgaaaaagg cgaaaagttc acgctggagg cggacggctt gctggcgatt tgcgtgcagc
     7861 acgagttgga ccacctgatg ggcatcgtgt ttgtcgaacg cctgtcgcag ctcaagcagg
     7921 gacgcatcaa aaccaagctg aaaaaacgtc agaaacatac gatttgaccc ttttgccgtg
     7981 ccgtctgaac gctgcaaagt tttcagacgg cacggtcttg tccgacaacc ttacgcatac
     8041 gcaggaatat gctatgaaag tcatctttgc cggcacgccc gattttgccg ccgccgcctt
     8101 aaaagccgtt gccgccgccg gttttgaaat cccgctggtg ctgacccagc ccgaccgtcc
     8161 gaaagggcgc ggtatgcaac tgaccgcccc gcccgtcaaa caagccgcgc tggaactcgg
     8221 tttgcgcgtg gcacagcccg aaaaactgcg taacaacgcc gaagccctgc aaatgctcaa
     8281 agaggtcgag gcagacgtaa tggtggttgc cgcctacggt ttgattctgc cgcaggaagt
     8341 gttggatacg ccgaaacacg gctgcctcaa catccacgct tcgctgttac cccgttggcg
     8401 tggcgcggcg ccgattcaac gcgcgattga agccggcgat gccgagacag gcgtgtgtat
     8461 tatgcagatg gacatcggtt tggacaccgg cgatgtggtc agcgaacacc gctacgccat
     8521 ccaaccgacc gataccgcca acgaagtcca cgacgcgctg atggaaatcg gtgcggcggc
     8581 ggttgttgcc gatttgcaac agcttcaaag caaaggccgt ctgaacgcgg tcaaacagcc
     8641 cgaagaaggt gttacttacg cccaaaaact aagcaaagaa gaggcgcgta tcgattggag
     8701 cgaaagcgcg gcggttatcg aacgcaaaat ccgcgccttc aaccccgtgc ctgccgcgtg
     8761 ggttgagtat cagggcaatc cgatgaaaat ccggcgggcg gaagtggtgg cgcaacaagg
     8821 cgcggcaggc gaagtgttgt cctgttcggc ggacggtttg gtcgttgcct gcggcgaaaa
     8881 cgcgctgaag attaccgaat tgcagcctgc cggcggcagg cgtatgaata tcgcggcgtt
     8941 tgcggcggga cggcatatcg aagcagggac gaagctgtaa atcccttcag acggcattcc
     9001 gatccgcaaa cgggaatgcc gtctgaaacc atcagttgaa gaaagcgaat cacataatat
     9061 gagtatggca cttgcccaaa aacttgccgc cgacagcatt gcggcggttg ccgaaggacg
     9121 caaccttcag gacgtgttgg cgcaaatccg caccgcgcat cccgacctta tggcgcagga
     9181 aaacggcgcg ttgcaggaca tcgcctacgg ctgccagcgt tatttgggca gtttgaaaca
     9241 tatgctcgcg cagatgctga aaaagccgat tggcaatccg cagctcgaaa gcctgctttt
     9301 ggcggcgttg taccagctgc attacacgcg caacgcgccc cacgccgtgg tcaatgaggc
     9361 ggtggaaagc atcgcgaaaa tcggacgcgg gcagtaccgt tcgtttgcca acgcggtttt
     9421 gcgccgcttt ttgcgcgaac gcgacaagct tgtggcttcc tgtaaaaaag acgatgtagc
     9481 gaaacacaac ctgccgctgt ggtgggtggc ttacttgaaa aaccattatc cgaaacactg
     9541 gcacaacatc gccgccgcgc tgcaatccca tccgccgatg actttgcgcg tcaaccgccg
     9601 acacggcaat gccgaaagct atttggaaaa actggtggcg gaaggtatcg cggctaaggc
     9661 gttggacgaa tatgcggtta cgttggaaga agccgtgccg gtgaaccgcc tgcctggttt
     9721 ttcagacggc attgtttcgg tacaggactt cggcgcgcag caggcggcgt atttgttaaa
     9781 cccgaaagac ggcgaacgga ttttggacgc gtgcgccgcg ccgggcggca agacggggca
     9841 tatcttggaa ctggcggatt gccgtgttac cgccttggac attgatgcag gccgtctgaa
     9901 acgggtggaa gacaatatcg cgcgtctggg ctttcagacg gcatcgacgg cgtgtgccga
     9961 tgcacaggac ctgtcggcat ggtatgatgg gaaaccgttt gatgccgtcc ttgccgacgt
    10021 gccgtgtacc gcctcgggcg tggcgcggcg caatcccgac gtgaaatggc tacgccgtcc
    10081 gaccgacgcg ctcaaaaccg cccgccagca ggaagccctg ctagatgcat tgtggcaggt
    10141 gctgaaaagc gggggaagga tgttgatcgc tacctgttcc gtgttcgtcg aggaaaacga
    10201 cggacaattg caaaaattcc tcaaccgcca tgccgatgca gaactgatcg aatcgcgggt
    10261 gcttttaccg aacaaacacc aagatggctt ttattacgcg cttattcaaa agcattaaac
    10321 aatggcttgt gctgctgccg atgctttccg ttttgccgga cgcggcggcg gaggggatag
    10381 atgtgagccg cgccgaagcg aggataaccg acggcgggca gctttccatc agcagccgct
    10441 tccaaaccga gctgcccgac cagctccaac aggcgttgcg ccggggcgtg ccgctcaact
    10501 ttaccttaag ctggcagctt tccgccccga taatcgcttc ttatcggttt aaattggggc
    10561 aactgattgg cgatgacgac aatattgact acaaactgag tttccatccg ctgaccaacc
    10621 gctaccgcgt taccgtcggc gcgttttcga cagactacga caccttggat gcggcattgc
    10681 gcgcgaccgg cgcggttgcc aactggaaag tcctgaacaa aggcgcgctg tccggtgcgg
    10741 aagcagggga aaccaaggcg gaaatccgcc tgacgctgtc cacttcaaaa ctgcccaagc
    10801 cttttcaaat caatgcattg acttctcaaa actggcattt ggattcgggt tggaaacctc
    10861 taaacatcat cgggaacaaa taatgcgccg ttttctaccg atcgcagcca tatgcgccgt
    10921 cgtcctgttg tacggactga cggcggcaac cggcagcacc agttcgctgg cggattattt
    10981 ctggtggatt gttgcgttca gcgcaatgct gctgctggtg ttgtccgccg ttttggcacg
    11041 ttatgtcata ttgctgttga aagacaggcg cgacggcgta ttcggttcgc agattgccaa
    11101 acgcctttcc gggatgttta cgctggttgc cgtactgccc ggcgtgtttc tgttcggcgt
    11161 ttccgcacag ttcatcaacg gcacgattaa ttcgtggttc ggcaacgata cccacgaggc
    11221 gcttgaacgc agcctcaatt tgagcaagtc cgcattgaat ctggcggcag acaacgccct
    11281 cggcaacgcc gtccccgtgc agatagacct catcggcgcg gcttccctgc ccggggatat
    11341 gggcagggtg ctggaacatt acgccggcag cggttttgcc cagcttgccc tgtacaatgc
    11401 cgcaagcggc aaaatcgaaa aaagcatcaa cccgcacaag ctcgatcagc cgtttccagg
    11461 taaggcgcgt tgggaaaaaa tccaacgggc gggttcggtc agggatttgg aaagcatagg
    11521 cggcgtattg tacgcgcagg gctggctgtc ggcgggtacg cacaacgggc gcgattacgc
    11581 cttgtttttc cgtcagccgg ttcccaaagg cgtggcagag gatgccgtct taatcgaaaa
    11641 ggcaagggcg aaatatgctg agttgagtta cagcaaaaaa ggtttgcaga cctttttcct
    11701 ggcaaccctg ctgattgcct cgctgctgtc gatttttctt gcactggtca tggcactgta
    11761 tttcgcccgc cgtttcgtcg aacccgtcct atcgcttgcc gagggggcga aggcggtggc
    11821 gcaaggcgat ttcagccaaa cccgtcctgt tttacgcaat gacgagttcg ggcgtttgac
    11881 caagttgttc aaccacatga ccgagcagct ttccatcgcc aaagaagcag acgagcgcaa
    11941 ccgccggcgc gaggaagccg ccagacatta tcttgaatgc gtgttggagg ggctgaccac
    12001 gggcgtggtg gtgtttgacg aacaaggctg tctgaaaacc ttcaacaaag cggcggaaca
    12061 gattttgggg atgccgctta cccccctgtg gggcagcagc cggcacggtt ggcacggcgt
    12121 ttcggcgcag cagtccctgc ttgccgaagt gtttgccgcc atcggcgcag cggcaggtac
    12181 ggacaaaccg gtccatgtga aatatgccgc gccggacgat gccaaaatcc tgctgggcaa
    12241 ggcaaccatc ctgcccgaag acaacggcaa cggcgtggta atggtgattg acgacatcac
    12301 cgttttgata cacgcgcaaa aagaagccgc gtggggcgaa gtggcaaaac ggctggcaca
    12361 cgaaatccgc aatccgctca cgcccatcca gctttccgcc gaacgtctgg cgtggaaatt
    12421 gggcgggaag ctggatgagc aggatgcaca aatcctgacg cgttcgaccg acaccatcgt
    12481 caaacaggtg gcggcattga aggaaatggt cgaagcattc cgcaattatg cgcgttcccc
    12541 ttcgctcaaa ttggaaaatc aggatttgaa cgccttaatc ggcgatgtgt tggcattgta
    12601 tgaagccggt ccgtgccggt ttgcggcgga gcttgccggc gaaccgctga tggtggcggc
    12661 ggatacgacc gccatgcggc aggtgctgca caatattttc aaaaatgccg ccgaagcggc
    12721 ggaagaagcc gatgtacccg aagtcagggt aaaatcggaa gtggggcggg acggtcggat
    12781 tgtcctgacg gtttgcgaca acggcaaagg gttcggcagg gaaatgctgc acaacgcctt
    12841 cgagccgtat gtaacggaca aaccggcggg aacgggattg ggtctgcccg tggtgaaaaa
    12901 aatcattgaa gaacacggcg gccgcatcag cctgagcaat caggatgcgg gtggggcgtg
    12961 tgtcagaatc atcttgccaa aaacggtaaa aacttatgcg tagcagcgat attttaattg
    13021 tagacgacga aatcggcatc cgcgacctgc tgtcggaaat cctgcaggac gaaggttatt
    13081 cggtcgcatt ggcggaaaac gccgaagagg cgcgcaagct gcgccatcag gcgcgtccgg
    13141 cgatggtgct gctggatatt tggatgcccg attgcgacgg catcaccctt ttgaaggagt
    13201 gggcgaaaaa cgggcagctt aatatgccgg tcgtcatgat gagcgggcat gccagcattg
    13261 acacagcagt ggaagccacc aaaatcggtg cgctcgactt tttggaaaaa ccgatctccc
    13321 tgcaaaaact gctgtctgcc gtcgaaaacg cgttgaagta cggtgcggcg caaaccgaaa
    13381 cggggcctgt attcgacaag ctgggcaaca gtgcggcgat tcaggagatg aaccgcgaag
    13441 tcgaagcggc ggcaaagcgc acgtcccctg tatttttgac gggtgaggtg ggttcgccgt
    13501 ttgaaaccgt agcgcgctat ttccataaaa acggtacgcc gtgggtcagt ccggcaaggg
    13561 tcgaatatct gatcgatatg ccgacggaac tgttgcagaa agctgaaggc ggtgttttat
    13621 atgtgggcga tattgcccaa tacagccgca atatccaaac cggcattgcc tttatcatcg
    13681 gcaaggcaga acgctgccgc gtcagggtgg tcgcatcggg cagcagggcg gcaggttcag
    13741 acggcattgc ctgcgaggaa aagctggcgg aactgctgtc ggaatcggtc gtccgtattc
    13801 cgccgctgcg tatgcagcat gaagacattc ccttcctgat acaggggatt gcctgcaatg
    13861 tggcggaaag ccaaaagatt gcgcctgcct cattcagtga agaggcactt gccgcattga
    13921 cccgttacga ctggccggga aatttcgacc aactgcaaag cgtcgttgca acgctgttgt
    13981 tggaggcgga cggacaggaa atcggcgcag gggcggtttc ttcccttttg gggcagaatg
    14041 tgcctgccga gggagcggaa gatatggtgg gcgggtttaa tttcaacctg cccctgcgcg
    14101 aattgaggga ggaggtggag cggcgttatt tcgagtacca catcgcccaa gaaggtcaga
    14161 atatgagcaa agtggcgcag aaagtcggtt tggaacgcac gcacctttac cgcaaactca
    14221 aacagctcgg catcggcgtt tcgcgccggg cgggggaaaa aaccgaagaa taggcccgga
    14281 cggccggttt tccggctgcg ggcttttgtt ttcagacggc atttggtgca aatgccgtct
    14341 gaaatcgtaa ggggacggat tttatgacag aggacgaacg tttcgcgtgg ctgcaattgg
    14401 cgtttacgcc ctatatcggc gcggaaagct tcctgctgct gctgcgccgt ttcggcagcg
    14461 cgtcaaacgc cctgtccgca ccggcggaac aggtcgcccc ggcggtgcgg cacaagcagg
    14521 cggccgaggc ttggcgcaat gcggaaaaac gcgcctcggc gcggcaggcg gcagaagcgg
    14581 cgttggaatg ggaaatgcgg gacggatgcc gtctgatgct gcttcaggat gaagatttcc
    14641 ccgaaatgct gacgcagggg ctgaccgcgc cgccggtttt gtttttgcgc ggcaacgtgc
    14701 ggctgctgca caagccttcc gccgccatcg tcggcagccg ccatgccacg ccgcaggcga
    14761 tgcggattgc caaagatttc ggcaagtcgt tgggcgggca aaatatcccc gttgtgtcgg
    14821 gtatggcttc cggtatcgat actgccgccc atcagggcgc actggaggca gaaggcggca
    14881 ccatcgccgt gtgggggacg ggtatagacc gcatttaccc gccgtccaat aaaaaccttg
    14941 cctatgaaat cgccgaaaaa ggattgattg tcagcgagtt tcccatcggt acgcgcccgt
    15001 atgccggcaa ctttccgcgc cgcaaccgcc tgattgccgc gctgtcgcag gttacgctgg
    15061 tggttgaagc tgcgttggaa tccggttcgc tgattaccgc cggcttggcg gcagaaatgg
    15121 ggcgcgaagt gatggcggta cccggttcga tagacaatcc gcacagcaaa ggctgccaca
    15181 aactgattaa agacggcgcg aaattggtgg aatgcctgga cgacatcctg aacgaatgcc
    15241 cggggctatt gcaaaatacg ggtgcttcat catattctat aaataaggat acgcccgaca
    15301 cgggcagtcg cgccgttcag acggcatacg ccccgccgcc tgccgcaaaa atgccgtctg
    15361 aaggggcggc aggcggcaca gccgtcggcg gcatactgga taaaatgggt ttcgacccca
    15421 tccatcccga cgtgcttgcc ggacagttgg ctatgcctgc cgcagatttg tatgccgcac
    15481 tgttggaatt ggaattggac ggcagcgttg ccgcaatgcc cggcggcaga taccagcgta
    15541 tccgaacttg aacgcacttt atattaagga acacgaatga ccgaagtcat cgcctacctc
    15601 atcgaacatt tccaagattt cgatacctgt ccgccgcccg aagacttggg tatgctgctt
    15661 gaagaagcgg gtttcgatac gatggaaatc ggcaacaccc tgatgatgat ggaagtattg
    15721 ctcaacagct ccgaattttc cgccgaacct gccgacagcg gcgcattgcg cgtgtacagc
    15781 aaagaagaaa ccgacaacct gccgcaggaa gtgatggggc tgatgcagta tctgattgaa
    15841 gaaaaagccg tcagctgcga acagcgggaa atcatcatcc acgcgctcat gcacattccg
    15901 ggcgacgaaa ttaccgtaga taccgccaaa gtgctgaccc tgctgctttt atgggcaaac
    15961 aagagcgagc tgcccgtgtt ggtcggcgac gagctgatga gcgcgctttt actcgacaac
    16021 aaacccacga tgaactgaag cggcttcaga cggcccgccc gagtccgtct gaaacgtcgg
    16081 catcaaaacc accatccaga gaacgacaaa tggcgaaaaa cctattaatc gtcgaatccc
    16141 cgtccaaagc caaaaccctg aaaaaatatt tgggcggcga ttttgaaatc cttgcatcct
    16201 acggacacgt ccgcgacctc gtccccaaaa gcggcgcggt cgatcccgac aacggctttg
    16261 cgatgaaata ccaactcatc agccgcaacg gcaaacacgt cgatgccatc gtcgccggag
    16321 ccaaagaagc cgaaaacatc tacctcgcca ccgacccgga tagggaaggc gaagcgattt
    16381 cttggcatct tttggaaatc ctcaaatcca aacgcggcct gaaaaacatc aagccgcagc
    16441 gtgtcgtgtt ccacgaaatc accaaaaacg ccgtgctcga tgccgttgcc catccgcgcg
    16501 aaatcgaaat ggacttggtc gatgcgcaac aagcccgtcg cgctttggac tatttggtcg
    16561 gctttaacct ttcgccattg ttatggaaaa aaatccgccg cggtttgagc gcgggtcgtg
    16621 tgcaaagtcc cgctttgcgc ctgatttgtg agcgtgaaaa cgaaatccgc gcgtttgaag
    16681 cgcaggaata ttggacggtg catctcgaca gccacaaagg ccgcagcaag tttaccgcca
    16741 aactcgccca atacaacggc gcgaaactcg aacaattcga cctgccgaac gaagccgcgc
    16801 aagccgacgt gttgaaagaa ctcgaaggca aagaggccgt cgttaccgcc attgaaaaga
    16861 aaaagcgcag ccgcaatccc gccgcgccgt tcaccacttc taccatgcag caggatgccg
    16921 tgcgcaaact cggcttcacc accgaccgca ccatgcgtac cgcccaacag ctttatgaag
    16981 gtatagacgt agggcagggc gcgatcggtc tgattaccta tatgcgtacc gacagcgtga
    17041 atttggcgga tgaagcctta accgaaatcc gccattacat cgaaaacaaa atcggcaaag
    17101 aatatctgcc gagtgccgcc aaacaataca aaaccaaatc caaaaacgcc caagaagcgc
    17161 acgaagccat ccgcccgact tccgtgtacc gcacgcccga aagcgtcaaa cccttcctga
    17221 gcgcagacca gttcaaactc tatcaaatga tttggcagcg taccgtcgcc tgtcagatga
    17281 cgcccgccaa attcgaccaa accaccgtcg atattaccgt cggcaaaggc gtattccgcg
    17341 taaccggaca agtgcagact ttcgcaggct tcctcagcgt ttacgaagaa agcagcgacg
    17401 atgaagaagg cgaagacagc aaaaaactgc ccgaaatgag cgaaggcgac aaattgcccg
    17461 tggacaaact ctacggcgaa caacacttta ccactccgcc gccacgctac aacgaagcca
    17521 cgctggttaa agccctcgaa gaatacggca tcggccgccc ctcgacctac gccagcatca
    17581 tctccacgct caaagaccgc gaatacgtta cccttgagca aaaacgcttc atgcccaccg
    17641 acacaggcga catcgtcaat aaattcctga ccgaacactt cgcccaatac gtcgattacc
    17701 acttcactgc caaactcgaa gaccagcttg acgaaattgc cgacggcaaa cgccaatgga
    17761 ttcccttgat ggacaaattc tggaaaccgt tcatcaaaca agtggaagaa aaagaaggca
    17821 tcgaacgcgc caaatttacc acgcaggaac ttgacgaaac ctgccccaaa tgcggcgaac
    17881 acaaactgca aatcaagttc ggcaaaatgg gtcgcttcgt tgcctgcgcc ggttatccag
    17941 agtgcagcta cacccgcaac gtcaacgaaa ctgccgaaga agccgccgag cgcatcgcca
    18001 aagccgaagc agagcaagcc gaacttgacg ggcgcgaatg ccccaaatgc ggaggacggc
    18061 tggtgtacaa atacagccga accggcagca aattcatcgg ctgcgccaac tatccgaaat
    18121 gcaaacacgt cgagccgttg gaaaaaccga aagacaccgg cgtccaatgc ccgcaatgca
    18181 aaaaaggcaa cctcgtcgag cgcaaatccc gctacggcaa actgttttac agttgcagca
    18241 cctatcccga ctgcaactac gccacctgga acccgcccgt tgcagaaacc tgtccaaaat
    18301 gcgcgtggcc ggttttgacc atcaaaacca ccaaacgctg gggtgtggaa aaagtctgcc
    18361 cgcaaaaaga atgcggctgg aaagaacaga ttgaaccgcc tgcaccgaaa gagtgaagcg
    18421 gttggggttg agatgaaaga aaatgccgtc tgaaaggggt ttcagacggc attttcttca
    18481 tgtgaaaaca aacctactca gattgaaact gtttacacac ttctatatta atctgtataa
    18541 agtcctgcca cgacatttgt tctgataagt aatggtgata atagtcctcc acacgacaga
    18601 ccaaagggcg cgtttcatag atagtgcata agcgcgttga atcatcgaaa tggcggcagg
    18661 taccatctcc ccgatccagg tatatggttt gttcgcttaa attgaccttt tgacagcaca
    18721 aaccgcaagc agagcatggg aagggttctg atgaggcaat caaaaatcga ttactttcac
    18781 attgtcgttt ttcaaagctg caatcagatt gtccacctgt ttcagtggag aatctttggc
    18841 aatgctcaca atgccgttaa ttgctgtatc aatgacgtgg atatttcccg cttccattcc
    18901 tttgtccaat gcctcaaata aaccgtcaat cattttgcga cgttctttga acgtattttc
    18961 cagatacaag cgcaaaattt cttgttggtt tttcaattct gctaatcgga catcacgcca
    19021 tgcaccaatg acttcacgtt tggttttctc ttgtgcagca attttcttat attcgttgcg
    19081 tgcttctaag atgcgaaaaa acgaattaga agctgcatca aacggaatgg ttgctggatt
    19141 ctttgttggt agcttattaa ggatttggat ttttcccatt atactgtacc taattcgata
    19201 ttcagacaac cttcgcattg atgacggata ttggctacag gagatccgtc ctcttccata
    19261 ataggcgtat tcagcagatt tttaatcgcc ttgccgatga ccagcatggt atggaaatca
    19321 ggatggtcgg catggtcgac acgaaccttt tcgaaacgtt taaccatttc ttctaaggta
    19381 tggcgtattt cccttgcgtt ttccttcaac ccttctaatc cttctgtaat taaatccatc
    19441 tcgtcaatag cctcatcgat ttcagcacta tatgctcgtg cttccgtcag tgcctcttcc
    19501 gccttgcttg ccagcataaa tccaccgatt gctaaagcag gtcctgccac gatgccaccc
    19561 aaagccacca tgccgcctgc cataccgaat ccacctgctg ccaatgagcc acctccgagc
    19621 caagcaaggg ttgcattggt tgccgcagca cctgaaaggg tggagattgc tgttcctgtg
    19681 gaagcagttg caatcatagg tactgcaccg tatacgccaa agcctgccag tgcgccagta
    19741 atggcactac tgccgagatt ggtgcttaac tctaaagaag tttgcaccat agtttccatt
    19801 tcttttaatt cagcaatatc aaatgtactg ttaaaacccg acagttcgct tttcgcatgc
    19861 ttgttgctgg tgttgtttag gacttgaaca atatgtctga tttgattgtt aaaaatatca
    19921 accttaaact gtcccagctc ctcaaaagca aggttggttt cgtctttagt cgaattcaat
    19981 tctcttttcc tgcgtttata acggcgttct gcacgctcac ctatttcttt tgcatcatct
    20041 atatcgctga gtgcagctgc tcctttgaca atacctgttg cagcaagggc ggcggctgca
    20101 ccccaaagta aaactggaat agccatgtgt aatttcctaa agtgtataaa aagttaaaaa
    20161 tcttgaagtt tcaatgtgta ttgtaatttt aaaattctat taaaaataca tttgccattc
    20221 cagcaaacta aagtttaaaa tctatccaaa taatttaacc atctatacag aaagttcagc
    20281 tcatggaaac ccacgaaaaa atccgcctga tgcgcgaatt gaacaaatgg tcgcaggagg
    20341 atatggcgga aaagctggcg atgtcggcag gcgggtatgc caaaatcgaa cggggcgaaa
    20401 cgcagttgaa tatcccgcgt ttggagcagt tggctcagat tttcaaaatc gatatgtggg
    20461 acttgctcaa atcgggcggc ggcgggatgg tgtttcagat taatgaaggt gatagtggtg
    20521 gcgatattgc gttgtatgcg tcaggtgatg tttcgatgaa aatagaattt ttaaaaatgg
    20581 agttgaaaca ttgtaaagaa atgttggaac aaaaagacaa agaaatcgag ttgctccgca
    20641 agctgaccga aaccgtttaa acagatatgc cgtctgaaaa aagttttcag acggcatatt
    20701 ctttgacagg tcttgtataa taccgtttga acttacaggt ttttgattat ggcggcaggc
    20761 aaacatacca aacacagcaa ccaggtacgc attatcggcg ggcaatgtcg gggcaggaaa
    20821 ttgagttttg catccgccaa cggactgcgt ccaacccccg atagcgtgcg tgaaaagctg
    20881 tttaactggc tgggacagga tttgacgggt aaaacggttt tggatctctt cggaggcagc
    20941 ggcgcactcg gtatagaagc cgcttcgcgc aacgccaaac gcgtgctgat ttcggataac
    21001 aaccgccaaa ccgtgcagac cttgcagaaa aacagtcgcg aactgggttt ggggcaggtg
    21061 caaatcgtct gttcagacgg catcgcatat ttgaagaccg tatccgaaca gtttgatgtc
    21121 gtctttctcg acccgccgtt tgcatggcag gactggcaaa tcctgttcga tgccttgaag
    21181 ccgtgcctga acccccgggc attcgtctat ctcgaggcgg gtaggctgcc ggatatcccc
    21241 gattggctga cggaatatag agaagggaaa tcagggcaga gtacattcga attaagggtt
    21301 ttccaagtgg ctgaataata tgcgctttga taatcatttc cgagttgtaa acattcgttt
    21361 gcaaccgtcc ggttcaaaaa aaccttgtgc tataatccgc gcccgcccgg ttttgataat
    21421 ttagtggaaa aggaaaagaa atgtcgcttt ttattaccga cgagtgcatc aactgcgacg
    21481 tatgcgaacc cgaatgcccc aatgatgcca tttcccaagg cgaggaaatt tacgaaatca
    21541 accccaacct ctgcacgcag tgcgtcggac actacgatga gccgcagtgc cagcaggttt
    21601 gcccggtgga ctgcatcctg attgacgaag aacatcccga aacccatgac gagttgatgg
    21661 cgaaatacga aaagattatc cagtttaaat aaattctttt taaaacatca aattatgtct
    21721 gttttgaaat aaaatcaaaa aaaaacttga cggaaaagca agccgctaat aaactaacgt
    21781 tctcttttgg agggattccc gagcggtcaa agggggcaga ctgtaaatct gttgcgaaag
    21841 cttcgaaggt tcgaatcctt ctccctccac caaaattctt acttggggca gtagcgagta
    21901 atgcgggtgt agctcaatgg tagagcagaa gccttccaag cttacggtga gggttcgatt
    21961 cccttcaccc gctccaaaca attaggccca tgtagctcag gggtagagca ctcccttggt
    22021 aagggagagg ccggcagttc aaatctgccc atgggcacca tctctcgatt attcatttct
    22081 ttaaggctta gatatatagg atattgccat ggctaaggaa aaattcgaac gt
//
LOCUS       DBBZXU010000022        21849 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.022, whole genome shotgun sequence.
ACCESSION   DBBZXU010000022 DBBZXU010000000
VERSION     DBBZXU010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21849
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.022"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(108..1031)
                     /gene="era"
                     /locus_tag="ACJJDE_000726"
     CDS             complement(108..1031)
                     /gene="era"
                     /locus_tag="ACJJDE_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004286080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HGG7540687.1"
                     /translation="MDIETFLAGERAAGGYRCGFVAIVGRPNVGKSTLMNHLIGQKIS
                     ITSKKAQTTRNRVTGIYTDDTAQFVFVDTPGFQTDHRNALNDRLNQNVTEALGGVDVV
                     VFVVEAMRFTDADRVVLKQLPKHTPVILVVNKIDKDKAKDRYALEAFVAQVRAEFEFA
                     AAEAVSAKHGLRIANLLELLKPYLPESVPMYPEDMVTDKSARFLAMEIVREKLFRYLG
                     EELPYAMNVEVEQFEEEDGLNRIYIAVLVDKESQKAILIGKGGERLKKISTEARLDME
                     KLFDTKVFLKVWVKVKSGWADDIRFLRELGL"
     gene            complement(1078..1797)
                     /gene="rnc"
                     /locus_tag="ACJJDE_000727"
     CDS             complement(1078..1797)
                     /gene="rnc"
                     /locus_tag="ACJJDE_000727"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HGG7540688.1"
                     /translation="MKDDVLKQQAHAAIQKRLGYAFRDISLLRQALTHRSHHAKHNER
                     FEFVGDSILNYTVARMLFDTFPKLTEGELSRLRASLVNEGVLAEMAAEMNVGDGLYLG
                     AGELKSGGFRRPSILADAMEAMFAAVSFDADFNTAEKVVRHLFADRVRCADFQNQAKD
                     GKTALQEALQARRFALPKYRIEEQIGHANDSMFVVSCDLGELGFVCRAKGTSRKAAEQ
                     EAAKEALKWLEEKLPLKKKKK"
     gene            1964..2287
                     /locus_tag="ACJJDE_000728"
     CDS             1964..2287
                     /locus_tag="ACJJDE_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2185 domain-containing protein"
                     /protein_id="HGG7540689.1"
                     /translation="MNAFAQALSSALDRCIATNTVAKQNRPVGFLYREAPVFENDSGW
                     RFFSGDETDEYTDDPDNFSIVSLADIAKTNPETAALLSQPEGSAWELAEDGTFQTVAD
                     WQPQD"
     gene            2335..2811
                     /gene="ribH"
                     /locus_tag="ACJJDE_000729"
     CDS             2335..2811
                     /gene="ribH"
                     /locus_tag="ACJJDE_000729"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HGG7540690.1"
                     /translation="MNTIAPNLDGKHLRIGIVQARFTNEIGSEMLKVCCRTLQELGVA
                     DENITVATVPGALEIPIALMNLASSEKFDALIAIGVVIRGETYHFELVSNESGAGVSR
                     VALDYNIPIANAVLTTENDAQAIERIEEKASDAAKVAVECANLVNLLLEEQFEDEE"
     gene            2889..3314
                     /gene="nusB"
                     /locus_tag="ACJJDE_000730"
     CDS             2889..3314
                     /gene="nusB"
                     /locus_tag="ACJJDE_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HGG7540691.1"
                     /translation="MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMPDFAKADE
                     ELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVI
                     INEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR"
     gene            complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="ACJJDE_000731"
     CDS             complement(3681..4715)
                     /gene="pyrC"
                     /locus_tag="ACJJDE_000731"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_process: GO:0019856 - pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HGG7540692.1"
                     /translation="MQTLTIIRPDDMHLHLRDGDALKAVVPYTARQMGRAVIMPNLKP
                     PVVSVADALAYKARIMAALPEGSAFEPLMTLYLTDNATSELVREAKAAGIVAFKLYPA
                     GATTNSDSGVTDLFKLIPVLEEMAKQGILFLVHGEVTDPEIDIFDREAAFIGRVMKPV
                     LAQVPNLKVVFEHITTAEAARLVLEAGDNVAATVTPQHLLLNRNDLLVGGVRPHHFCL
                     PVLKRETHRQALVAAVTGEKAHKFFLGTDSAPHAKSAKENACGCAGMFSAMTAIELYA
                     EVFEKAGALDKLEAFTSKNGARFYGIPENAGTITLVKQSQTVPASVPYGDGELVPMRA
                     GGEIGWTVQY"
     gene            complement(4775..5380)
                     /locus_tag="ACJJDE_000732"
     CDS             complement(4775..5380)
                     /locus_tag="ACJJDE_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540693.1"
                     /translation="MPSEMRMSRLMLLLSAFVLAACNAQNRQSCVRHQDFARVAVDLF
                     RSACVLTQGSFEPVSKFAAVGHFVPVGKEDLSRLPPAVAEPDVQALWTLERDGGIYYL
                     SLPRDCCSVKAERADSAVLLEHFDGLVRQPPKNTNIELRAEQSVQALFETRQISYAWR
                     ESGSPEETVLTAQTADSPDLPVQAVLNLTHRSHNGKPLILP"
     gene            complement(5381..5605)
                     /locus_tag="ACJJDE_000733"
     CDS             complement(5381..5605)
                     /locus_tag="ACJJDE_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HGG7540694.1"
                     /translation="MNSETLDVTGLKCPLPILRAKKALAQMQQGDVLTVLATDGGAPG
                     DFEAFCRQTGHVLLDASEQDGVFTLVVKHK"
     gene            5714..6325
                     /locus_tag="ACJJDE_000734"
     CDS             5714..6325
                     /locus_tag="ACJJDE_000734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNP1-like family protein"
                     /protein_id="HGG7540695.1"
                     /translation="MRRTALLLLALTAGTSLAAGFNQKDTPINTRYRETPEEAAAREF
                     KEHTAKLPPLPDTHSDGWFDIYVDENYGKQPKILLDSLQIMPAPDGSIRYILNIRSDK
                     GYDNLTAEGIFCARFSIRFGNGKPSSYKVFGYGDTVNRRWIQPRNAEWKPIGGTLSRN
                     DALRTVLYQAFCEGGVPADTKGLVQRLKERAGRYAPSMKPHDK"
     gene            complement(6385..7257)
                     /gene="accD"
                     /locus_tag="ACJJDE_000735"
     CDS             complement(6385..7257)
                     /gene="accD"
                     /locus_tag="ACJJDE_000735"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HGG7540696.1"
                     /translation="MSWLDKILPPKIKNRSKDGSSNVPEGLWHKCPSCSATVYSTELQ
                     QNNQVCPKCNHHNPLSARQRLNLLLDEDGREEVAGNVKPTDPLKFKDGKKYPDRLSAA
                     RKLTGEDDALVVMKGKMNGLPVVVAAFEFRFIGGSMGSVVGERFVQGIRRAVADNCPF
                     VCVAASGGARMQEGVNSLMQMTKTSAALHLLTEKRLPFISVLTDPTMGGVSASFAFLG
                     DVVLAEPNALIGFAGPRVIEQTVRETLPESFQRAEFLLEKGAIDQIVDRRDMKRRISD
                     LITLLCRQDKVSAA"
     gene            complement(7294..8079)
                     /gene="trpA"
                     /locus_tag="ACJJDE_000736"
     CDS             complement(7294..8079)
                     /gene="trpA"
                     /locus_tag="ACJJDE_000736"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HGG7540697.1"
                     /translation="MSRIRQAFAALDGGKALIPYITVGDPDIRTTLALMHGMVANGAD
                     ILELGVPFSDPMADGPVIQRAAERALANGISLRDVLDVVRKFRETDTQTPVVLMGYLN
                     PVHKMGYREFAQEAAMAGVDGVLTVDSPVETIDPLYRELKDNGVDCIFLIAPTTTEDR
                     IKTIAELAGGFVYYVSLKGVTGAASLDTDEVSRKIEYLHQYIDIPIGVGFGISNAESA
                     RKIGRVADAVIVGSRIVKEIENNAGNEAAAVGALVKELKDAVR"
     gene            complement(8506..8598)
                     /locus_tag="ACJJDE_000737"
     tRNA            complement(8506..8598)
                     /locus_tag="ACJJDE_000737"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8562..8564),aa:Ser,seq:gct)
     gene            complement(8755..8955)
                     /locus_tag="ACJJDE_000738"
                     /pseudo
     CDS             complement(8755..8955)
                     /locus_tag="ACJJDE_000738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(9057..9374)
                     /locus_tag="ACJJDE_000739"
                     /pseudo
     CDS             complement(9057..9374)
                     /locus_tag="ACJJDE_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237659.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
     gene            complement(9397..10158)
                     /gene="kdsB"
                     /locus_tag="ACJJDE_000740"
     CDS             complement(9397..10158)
                     /gene="kdsB"
                     /locus_tag="ACJJDE_000740"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008690 - 3-deoxy-manno-octulosonate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HGG7540698.1"
                     /translation="MTEFVVLIPARLDSSRLPGKALADIHGKPMVVRVAEQAAKSKAA
                     RVVVATDHPDIQTVCQAHGVEVVMTSNRHESGTTRLAEAAAALKLPQHLVVVNVQGDE
                     PLIAPELIDRTAEVLVENNVQMATAAHELHDFDELMNPNAVKVVLDKNRNAIYFSRAP
                     IPYLRDAMRAGKREMPFETAVLRHIGIYAYRVGFLQRYTEMSVSPLETIESLEQLRVL
                     WHGYPIAVETAKEAPAAGVDTQEDLDRIRAVFQTI"
     gene            complement(10155..10337)
                     /locus_tag="ACJJDE_000741"
     CDS             complement(10155..10337)
                     /locus_tag="ACJJDE_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HGG7540699.1"
                     /translation="MEKKFLDILVCPVTKGRLEYHQDKQELWSRQAKLAYPIKDGIPY
                     MLENEARTLSEEELKA"
     gene            complement(10406..10987)
                     /locus_tag="ACJJDE_000742"
     CDS             complement(10406..10987)
                     /locus_tag="ACJJDE_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2059 domain-containing protein"
                     /protein_id="HGG7540700.1"
                     /translation="MKLKTLLLPFATLALCTNAFAAPPSDASLARWLDTQNFDRDIEK
                     NMIEGFNAGFKPYADKALAEMPEAKKDQAAKAFNRYRENVLKDLITPEVKQAVRNTLL
                     KNAREIYTQEEIDGMIAFYGSPVGQSVVAKNPRLIKKSMSEIAVSWTALSGKIARHHL
                     PAFTEELRRIICGGKNPDAGCKQAGQVGKRHQK"
     gene            complement(11193..12227)
                     /gene="lpxK"
                     /locus_tag="ACJJDE_000743"
     CDS             complement(11193..12227)
                     /gene="lpxK"
                     /locus_tag="ACJJDE_000743"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_025462052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HGG7540701.1"
                     /translation="MPNCFKFHTVIERHWQKPYPVLSFLLKPLSGLFAKIAAKRRTDF
                     LSGKRQSEKLPVPVVVVGNIHAGGTGKTPIAAALVSGLQEKGVKVGIISRGYGRKSKA
                     VHVLNAASRAEDAGDEPLLLFSKTGAPTAVGSSRAEAGRALLAAHPDIGLIVADDGLQ
                     HYALRRDVEIAVFPAADTGRTDLDLLPNGNLREPLSRLDSVDTVVVSGGKADALFRPS
                     ENMFHSRIEAGRIYRLNNPSEILDTGRLKNQTVVAVAGIAKPARFFDSLRNMGITVKR
                     TVALPDHADISAADLPDADAVIITEKDAVKFSDGICTDNVWVLPVCAIIEPDLAAFVL
                     ERLEDVPKAV"
     gene            complement(12358..12537)
                     /locus_tag="ACJJDE_000744"
     CDS             complement(12358..12537)
                     /locus_tag="ACJJDE_000744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540702.1"
                     /translation="MKEMETVRYHIGDMPETSKQTAPVMTTGQWVLTMIVFMIPLVNF
                     CLGVRQRQPEPRQFL"
     gene            complement(12620..13900)
                     /locus_tag="ACJJDE_000745"
     CDS             complement(12620..13900)
                     /locus_tag="ACJJDE_000745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HGG7540703.1"
                     /translation="MENSLKEAALKFHELPVPGKISVTPTKSLATSKDLALAYSPGVA
                     APCMEIHADPQNAYKYTAKGNLVAVISNGTAVLGLGDIGALAGKPVMEGKGVLFKKFA
                     GVDVFDIEIDEKDPQKLVDIIAALEPTFGGINLEDIKAPECFYIERELRKRCKIPVFH
                     DDQHGTAIITAAAVLNALRFTGRKIEEATLVCSGAGAAAIACLNQLLDLGLKRENVTV
                     CDSKGVIYQTREDKDRMDESKKFYAVEDNGQRVLVDAVKGKDIFLGLSGANLLTPEML
                     NTMNEKPIVFAMANPNPEILPPLAKETRPDVVIGTGRSDFPNQVNNVLCFPFIFRGAL
                     DVGATTINEEMKRSCVYALADLAMEEVTEEVVAAYGKKFEFGAEYLIPTPFDSRLLPR
                     VATAAAKAAMESGVATRPIADFEAYAAKLGEWKL"
     gene            complement(14122..14742)
                     /gene="tmk"
                     /locus_tag="ACJJDE_000746"
     CDS             complement(14122..14742)
                     /gene="tmk"
                     /locus_tag="ACJJDE_000746"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006233 - dTDP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HGG7540704.1"
                     /translation="MKPQFITLDGIDGAGKSTNLAVIKAWFERRGLPVLFTREPGGTP
                     VGEALREILLNPETKAGLRAETLMMFAARMQHIEDVILPALSDGIHVVSDRFTDATFA
                     YQGGGRGMPSEDIEILEHWVQGGLRPDLTLLLDVPLEVSMARIGQSREKDRFEQEQAD
                     FFMRVRSVYLNRAAACPERYAIIDSNRSLDEVRNNIEKVLDGHFGC"
     gene            complement(14802..15797)
                     /gene="mltG"
                     /locus_tag="ACJJDE_000747"
     CDS             complement(14802..15797)
                     /gene="mltG"
                     /locus_tag="ACJJDE_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HGG7540705.1"
                     /translation="MLRKLLKWSAVFLTVSAAVFAALLFVPKDNGRAYRIKIAKNQGI
                     SSVGRKLAEDRIVFSRHVLTAAAYVLGVHNRLYTGTYRLPSEVSAWDILQKMRGGRPD
                     SVTVQIIEGSRFSHMRKVIDATPDIEHDTKGWSNEKLMAEVAPDAFSGNPEGQFFPDS
                     YEIDAGGSDLRIYQIAYKAMQRRLNEAWESRQDGLPYKNPYEMLIMASLIEKETGHEA
                     DRDHVASVFVNRLKIGMRLQTDPSVIYGMGAAYKGKIRKADLRRDTPYNTYTRGGLPP
                     TPIALPGKAALDAAAHPSGEKYLYFVSKMDGTGLSQFSHDLTEHNAAVRKYILKK"
     gene            15881..16453
                     /gene="ampD"
                     /locus_tag="ACJJDE_000748"
     CDS             15881..16453
                     /gene="ampD"
                     /locus_tag="ACJJDE_000748"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HGG7540706.1"
                     /translation="MDNHAEAHWQNGWLQSIRHTPSPNFSPRETGETVSLIVLHNISL
                     PPFEYGTDAVEKLFANRLDPDGHPFFSLIHTLRVSSHFLIKRDGETVQFVSCDNMAYH
                     AGVSSFRGREKCNAFSIGIELEGCDFEPFTEAQYRSLEALLDAICRRYPITAVTGHQD
                     IAPGRKTDPGHFFDWRRIRGKGFPVDRNAV"
     gene            16647..17933
                     /locus_tag="ACJJDE_000749"
     CDS             16647..17933
                     /locus_tag="ACJJDE_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010359823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0090529 - cell septum assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA C-terminal
                     FtsZ-binding domain-containing protein"
                     /protein_id="HGG7540707.1"
                     /translation="MIYIVLFLAAVLAVVAYNMYQENQYRKKVCDQFGHSDKDALLNS
                     KTSHVRDGKPSGGSVMMPKPQPAVKKTAKPQDPAMRNLQEQDAVYIAKQKQAKASPFK
                     TEIETALEESGIIGNSAHTVSEPQTGHSAPKPADAPAKPAPVPQTPAKPLITLKELSK
                     VELPWFDVRFDFISYIALTEAKELHALPRLSNRCRYQIVGCTMDDHFQIAEPIPGIRY
                     QAFIVGIQAVSRNGLASQEELSAFNRQVDAFAQSMGGQTLHTDLAAFIEVASALDAFC
                     ARVDQTIAIHLVSPTSISGVELRSAVTGVGFVLEDDGAFHYTDTSGSTMFSICSLNNE
                     PFTNALLDNQSYKGFSMLLDIPHSPAGEKTFDDLFMDLAVRLSGQLNLNLVNDKMEEV
                     STQWLKDVRTYVLARQSEMLKVGIEPGGKTALRLFS"
     gene            18081..20606
                     /gene="ligA"
                     /locus_tag="ACJJDE_000750"
     CDS             18081..20606
                     /gene="ligA"
                     /locus_tag="ACJJDE_000750"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HGG7540708.1"
                     /translation="MNPNSKHNTNFTNLLKPSDSDIKQFAAQHIRHLTDLLNRYAYEY
                     YTLDAPSVPDAEYDKLFRELEALELNHPELKLPDSPTQRVGGEPLAGFAEVRHEVPML
                     SLTNAFSPQDENGVFDHAEMYAFDQRVRDGLDGGKPEYVIEPKFDGLAISLLYRDGVL
                     VQAATRGDGTTGEDVTQNIKTVANIPLRLHGENTPELIEVRGEVLMQKADFAALNKRQ
                     AENGQKPFANPRNAAAGSLRQLDSRITAQRKLHFFPYSVARQQGGFVAEEHIQELAYF
                     QALGFSLPNGNFGCFKNIDEVLAFYEQMQQKRPELPYEIDGMVVKVNSLAQQRELGFI
                     SRAPRWAIAHKFPAEEALTIVEAIDVQIGRTGAVTPVARLQPVFVGGVTVTNATLHNQ
                     DEVSRKDVRVGDTVVVRRAGDVIPEVVRVIFERRPMQETAVAVSDGIGHRQDDLFAET
                     PSANQTQSVPLHKPYRLPTHCPICRSEIEREEGEAVARCSGGMLCQAQRAQGLIHFAS
                     RKAMDIDGLGEKQIEQLVAQDLVRHFADLYRLDIPTLQKMKETTDKTVAESDQTPSEG
                     SSVGASGKHKKQPVKWAENILGGIESGKTPELARFLFALGIRHVGERTAKTLAQAFGT
                     LERVRRAPEPVLACLPDIGTVVAHSIAHFFAQAEQQAMIDELLAAGVAPQTQAVTIPP
                     ARHAEPQRWIARLPDFKISENKAQALWELAGKNIEGLQNDKALPADWQAWRSEPQNAA
                     LLENLKTFFAQMPSEDEAAQGSDGINKAVAGKTFVLTGTLPTLKRDQAQSLIEAAGGK
                     VSGSVSKKTDYVVAGEAAGSKLEKANALGVSVLSEAELLTLLG"
     gene            20663..21838
                     /gene="hemW"
                     /locus_tag="ACJJDE_000751"
     CDS             20663..21838
                     /gene="hemW"
                     /locus_tag="ACJJDE_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HGG7540709.1"
                     /translation="MHTISFPNRTRLTALPPLSLYIHIPWCIKKCPYCDFNSHSLKNG
                     LPEAAYIDALLTDLQLELPNIWGRPVETIFFGGGTPSLFQAESIDRLLSGVRSLLRLQ
                     PEAEITLEANPGTFEIEKFQGFKDAGITRLSIGVQSFNDDMLSRLGRVHNGKEALTAI
                     DTALKLFDKVNIDLMYALPNQTVQTALDDVQTAIATGATHISAYHLTMEPNTPFGHTP
                     PKGLPQDEAALDIEDAVHGALESAGFVHYETSAFAKPAMQCRHNLNYWQFGDYLGIGA
                     GAHGKISYPDRIERTVRRRHPNDYLALMQNRPSEAVERKTVAAEDLPFEFMMNALRLT
                     DGVPAAMLQERTGVPSAKIMAQIETARQKGLLETDPAVFRPTEKGRLFLNDLLQCFL"
BASE COUNT         5220 a         6441 c         5346 g         4842 t
ORIGIN      
        1 atgcacagat aatatcaacc cgtttttaac aaagatattc ccgattgaaa caaaatgccg
       61 tctgaaacct gttcggacgg catttgcgta aagttcagca agaaaaacta caaacccagc
      121 tcgcgcagga agcggatgtc gtccgcccaa ccggatttga ctttgaccca gaccttcaaa
      181 aatactttgg tatcaaacag tttttccata tccaaccgcg cttcggtgga aattttcttc
      241 aaacgctccc cgcctttgcc gattaaaatc gccttttggc tttccttatc gaccaaaacg
      301 gcgatataga tgcggttcaa accgtcttcc tcttcaaact gctccacttc gacgttcatc
      361 gcataaggca attcctcgcc caaatagcgg aacaattttt cacgcacgat ttccatcgct
      421 aaaaaacgcg ccgatttgtc cgtaaccata tcttcgggat acatcggcac gctttcgggc
      481 agatacggct tgagcagctc caacaggttg gcaatccgca atccgtgttt cgcactgacc
      541 gcctccgccg ccgcaaattc aaattcggcg cgcacttggg caacaaacgc ctccagcgcg
      601 taacggtctt tcgccttgtc cttgtcgatt ttgttgacca ctaaaatgac cggcgtgtgc
      661 ttgggcagtt gtttcaacac gacacggtcg gcatcggtaa agcgcatcgc ttccacgacg
      721 aaaaccacca catccacgcc gccaagcgcc tcggtaacgt tttgattcag cctgtcgttg
      781 agcgcgttgc ggtggtcggt ttgaaagccg ggcgtatcga caaacacgaa ctgcgcggta
      841 tcgtcggtat aaatccccgt tacgcggttg cgcgtcgtct gcgccttttt gctggtgatg
      901 ctgattttct gaccgatgag atggttcatc agcgttgatt tgcccacgtt cggacgaccg
      961 acaatcgcca cgaagccgca acggtatccg ccggcggcgc gttcccctgc aaggaaggtt
     1021 tcaatatcca tattcgcttt catatccaca tttcagacgg catattcacg cgccgcctca
     1081 tttctttttc ttcttcagcg gcagcttctc ttccagccat ttcaaagcct ctttcgccgc
     1141 ctcctgttcc gccgccttgc ggctcgtccc tttggcacgg cacacgaaac ccagttcgcc
     1201 caaatcgcag gaaaccacaa acatactgtc gttggcatgg ccgatttgct cttcgatacg
     1261 gtatttcggc aaagcaaagc ggcgtgcctg caacgcctcc tgcaaagcag ttttgccgtc
     1321 ttttgcctga ttttggaaat cggcacaccg gacgcggtcg gcaaacaaat ggcgcaccac
     1381 cttttccgcc gtgttgaaat cggcatcgaa gctgaccgcc gcaaacatcg cctccatcgc
     1441 gtccgccagt atcgaaggcc gtctgaagcc gccgctcttc aactcgcccg cccccaagta
     1501 cagaccgtcg ccgacattca tttccgccgc catttccgcc agcacgccct cattgaccag
     1561 acttgcccgc aaccgcgaca actcgccctc ggtcaacttc ggaaacgtgt caaacagcat
     1621 ccgcgccacc gtataattca aaatcgaatc accgacaaac tcgaaccgct cgttgtgctt
     1681 cgcatgatgg ctcctgtgcg tcaaagcctg ccgcaaaagc gaaatatcgc ggaacgcgta
     1741 gcccagtctc ttctgtatcg ccgcgtgtgc ctgctgtttc aaaacatcgt ctttcattac
     1801 cgtcttccgc aaaaaacagc ccgaatgcgt ttccatactc caaaaataca gaaacacctt
     1861 aaggctgcaa acggcgcaca ttgtaccacc aaaccgccgc cgtctgccga caacgcacga
     1921 atcgtggtaa aatccgtaag ttttccccca acgtattccc gtaatgaacg catttgcaca
     1981 agcactttcc tcggcactcg accgctgtat cgccaccaac accgtcgcca aacaaaaccg
     2041 gcccgtcggc ttcctctacc gcgaagcccc cgtttttgaa aacgacagcg gctggcgttt
     2101 cttcagcggc gacgagaccg acgaatacac cgacgatccc gacaacttca gcatcgtcag
     2161 cctcgccgac atcgccaaaa ccaaccctga aaccgccgca ctgctttccc aacccgaagg
     2221 cagcgcatgg gagcttgccg aagacggcac attccaaacc gtcgccgact ggcagccgca
     2281 agactgaaac cttcagacgg cattccgaaa cctccgaata ccaaaggaca cccaatgaac
     2341 accatcgccc ccaacctcga cggcaaacac ctccgcatcg gcatcgtaca ggcacgtttc
     2401 accaacgaaa tcggcagcga aatgctcaaa gtctgctgcc gcaccctcca agaattgggc
     2461 gtggcagacg aaaacattac cgtcgccacc gtacccggcg cacttgaaat ccccatcgca
     2521 ctgatgaacc ttgcctcttc cgaaaagttt gacgcactga ttgccatcgg tgtcgtcatc
     2581 cgtggcgaaa cctaccattt cgagctggtt tccaacgaat ccggagcagg ggttagccgc
     2641 gtcgcactcg actacaacat cccgattgcc aatgccgtcc taaccaccga aaacgacgcg
     2701 caggcaatcg aacggattga agaaaaagcc tcggatgccg ccaaagtcgc cgtcgaatgc
     2761 gccaacctcg tcaacctgct gctcgaagaa cagtttgaag acgaagaata acaaacaggg
     2821 cgtacaccaa tacgcccttt ccgtttcaga cggcataccg tgccgcccaa ccgtttcaag
     2881 gaaaaatcat gaaaacagcc cgccgccgtt cccgcgagct tgccgtacaa gccgtttacc
     2941 aatcccttat caaccgcacc gccgcgcccg aaattgctaa aaacatccgc gaaatgcccg
     3001 actttgccaa agcggacgaa gaattgttca acaaactttt cttcggtacg caaaccaacg
     3061 cagcggacta catccaaaaa atccgccccc tgctcgaccg cgacgaaaaa gacctcaatc
     3121 ccatcgaacg cgccgtcctg ctgaccgcct gccacgagct gtccgccatg cccgaaacac
     3181 cctaccccgt catcatcaac gaagccatcg aagttaccaa aaccttcggc ggcacggacg
     3241 ggcacaaatt cgtcaacggc atcctcgaca aactcgccgc ccaaatccgc cccgacgagc
     3301 ccaaacgccg ttgatgcatc acaaatttaa agaaagttct atgtccttat ttctgctttc
     3361 tttgtttcgt cattcccacg caggtgggaa tttggttttt tgaattttgg gtatttcaaa
     3421 taaattctga aacttcaatc tcgtcattcc cgcgcaggcg ggaatccggt tttttgagtt
     3481 gctgccgttt ttgataaact ttggtcgcat cgaatttctg gattcctgcc ttcgtgggaa
     3541 tggcgaaatt tgaaaattgt gggaatttat cggaaataac cgaaacgtaa caaactcaaa
     3601 cgccgttgac gtatcaatca gtcagcaaca caaatgccgt ctgaaaaacc tttcagacgg
     3661 cattttgctt gaccgttcaa tcaatactgt accgtccagc cgatttcgcc gcccgcgcgc
     3721 atcgggacaa gttcgccgtc gccgtaggga acacttgcgg ggacggtttg gctttgtttg
     3781 acgagggtga tcgtgccggc gttttccgga atgccgtaaa accttgcgcc gtttttcgag
     3841 gtaaaggctt cgagtttgtc caacgcgcct gctttttcaa acacttcggc gtaaagctcg
     3901 atggcggtca tcgcgctgaa cataccggcg caaccgcagg cgttttcttt agcggatttg
     3961 gcgtgcggcg cggaatctgt gccgaggaag aatttgtgcg ccttctcgcc ggtaacggcg
     4021 gcaaccaatg cctgacggtg ggtttcgcgt ttgagtacgg gcaggcagaa atgatggggg
     4081 cgcacgccgc cgaccaagag gtcgttgcgg ttgagcaaga ggtgttgcgg ggtaacagtg
     4141 gcggcaacgt tgtcgcctgc ttccaaaacg aggcgggcgg cttcggcggt ggtgatgtgt
     4201 tcgaacacga ctttaagatt tggtacttgc gccaaaacgg gtttcatcac gcgcccgata
     4261 aaggcggctt cacggtcgaa gatgtcgatt tcggggtcag ttacttcgcc gtgaacaagg
     4321 aacaggatgc cctgtttcgc catttcttcc aaaacgggga taagtttgaa caggtcggtt
     4381 acgccggaat cggaattggt ggtcgcgccg gcggggtaga gtttgaaggc aacgatgccg
     4441 gcagctttgg cttcgcgtac aagttcggac gtggcgttat cagtcaaata aagcgtcatc
     4501 aacggctcaa acgcgctgcc ttcgggcaac gccgccataa tgcgcgcttt gtaggcaagc
     4561 gcgtcggcaa cgctgacgac aggcggtttg agattgggca taatcacggc gcgccccatc
     4621 tgtctggcgg tataaggcac aacggctttg agcgcgtcgc cgtcgcgcag gtgcaggtgc
     4681 atatcgtcgg ggcggataat ggtcagggtt tgcatggttt tcctttgttt tatttgaatg
     4741 ttcagacggc atgccgactt tatgccgtct gaagttaggg gagaattagg ggtttcccgt
     4801 tgtgggaacg gtgcgtcagg ttcaaaactg cctgtacggg caaatccggg gaatcggcgg
     4861 tttgtgcggt caatacggtt tcttcggggc tgcccgattc ccgccaggca tagctgattt
     4921 gcctggtttc aaacagtgcc tgcaccgact gttcagccct caattctata ttggtatttt
     4981 tcggcggctg tcggacaagt ccgtcaaaat gttccaaaag cacggcactg tctgcccgct
     5041 cggctttcac actgcaacag tcgcgcggca ggctcaaata ataaatgccg ccatcgcgtt
     5101 caagcgtcca caacgcctgt acatcgggtt ctgcaacagc gggcggcaga cgggacaggt
     5161 cttcctttcc gacagggaca aaatgtccga cagcggcaaa cttggaaact ggttcgaaac
     5221 tgccttgagt caggacgcag gcactccgaa acaaatcgac ggctacacgt gcgaaatcct
     5281 gatgccgtac acaggattgc cggttttggg cattacacgc agcaagcaca aatgccgaca
     5341 gcaataacat caatcgggac atccgcattt cagacggcat ttatttgtgc ttgacgacca
     5401 gcgtgaacac gccgtcctgt tcggaagcat ccaacagcac atgaccggtt tggcggcaaa
     5461 aagcctcaaa atcccccggt gcgccgccgt cggttgccag aacggtcaac acgtcgccct
     5521 gctgcatttg cgccaaagcc tttttcgccc gcaaaatcgg caggggacat ttcaatccgg
     5581 ttacgtctaa agtttcgctg ttcatcgttt gtaccgttta aaaaatggga atcgggggga
     5641 gattataccc cagttgcttg cagccccctt tgccaaccca taaaataacg ccgttttcaa
     5701 tttggagaaa cttatgcgcc gcaccgccct cctgctgctc gcactcaccg ccggcacgtc
     5761 ccttgctgcc ggcttcaacc aaaaagacac gccgatcaac acccgctacc gcgaaacgcc
     5821 cgaagaagcc gccgcccgcg aatttaaaga acataccgcc aaactgccgc cgctgcccga
     5881 tacgcactcg gacggctggt ttgacattta tgtggatgaa aattacggca aacagccgaa
     5941 aatcctgctc gacagcctgc aaattatgcc cgcgcccgac ggcagcatcc gctacattct
     6001 caatatccgc tccgacaaag gctacgacaa cctgactgcc gaaggcatat tctgcgcccg
     6061 cttctccatc aggttcggca acggcaaacc ttcctcctat aaagtgttcg gctacggcga
     6121 cacggtcaac cgccgctgga tacagccccg aaacgccgaa tggaaaccga taggcggtac
     6181 attaagccgc aacgacgcac tgcgcaccgt cctgtatcag gcattctgcg agggcggtgt
     6241 acccgccgac acgaaaggtt tggtacaacg cctgaaagaa cgtgccggac gctatgcccc
     6301 gtcgatgaag ccgcacgaca aataaccaga cacaaaaata ccgtctgaaa catcggtttc
     6361 agacggtatt cgattcatca gccatcaagc ggcggaaact ttgtcctgac ggcacaacag
     6421 cgtaatcaaa tcactgatgc gccgcttcat atcgcggcgg tcgacaatct ggtcgattgc
     6481 gcctttttcc agcaggaact cggcgcgttg gaagctttcc ggcagcgttt cgcgcaccgt
     6541 ctgctcaatc acgcgcggac cggcaaaacc gatcagcgcg ttcggttcgg caagcacgac
     6601 atcgcccaaa aatgcgaagc tggcggatac gccgcccata gtcggatcgg tcaacaccga
     6661 tataaatggc aggcgttttt ccgtcagcaa atgcagcgcg gcactggttt tcgtcatctg
     6721 catcaatgag ttcacaccct cctgcatacg cgcaccgccg gaagccgcca cacagacgaa
     6781 cggacaattg tcggcaaccg cccgacggat accttgtacg aatcgttcgc ccacaaccga
     6841 acccatcgaa ccgccgataa agcggaattc aaacgcggca acgacgacgg gcagaccgtt
     6901 catcttgcct ttcattacca ccaaagcatc atcttccccg gtcagcttgc gtgccgcact
     6961 caaacgatcc ggatattttt tgccgtcttt aaacttcaaa ggatcggtcg gtttgacatt
     7021 tccggcaacc tcctctctgc catcctcatc caaaagcaga ttcaggcgtt gtcgtgccga
     7081 caacggattg tggtggttgc atttcggaca aacctgattg ttctgctgca actcggtcga
     7141 ataaacggtt gccgaacaag acggacattt gtgccacaaa ccctcgggaa cattggaaga
     7201 accgtctttg ctgcggtttt tgattttggg tggcaggatt ttatctaacc agctcatgga
     7261 caactcctaa aatatttaga atgcgtgaca gaatcagcgc acggcatcct tcaactcttt
     7321 gaccaaagca ccgacggccg cagcctcgtt gcccgcattg ttttcaatct ctttcacaat
     7381 ccggctgccg acaatgaccg cgtcggcaac ccggccgatt ttgcgcgcgc tttccgcatt
     7441 gctgatgccg aaaccgacac cgatgggaat atcgatatac tgatgcaaat actctatttt
     7501 acgcgaaacc tcatccgtat ccaaacttgc cgcgcccgtt acgcccttga gcgaaacata
     7561 atagacaaat ccgcctgcca gctcggcaat ggttttaata cggtcttccg tcgtcgtcgg
     7621 cgcaatcagg aaaatacagt cgaccccgtt atccttcagc tcgcgataga gcggatcgat
     7681 ggtttcgaca ggggaatcca ccgtcaacac gccgtccaca cccgccattg cggcttcctg
     7741 agcaaactcc cgataaccca tcttatgtac agggttcaaa tatcccatca aaacaaccgg
     7801 cgtttgcgtg tcggtttcac ggaattttct gacgacatcc aagacatcgc gcagcgaaat
     7861 cccgtttgcc aacgcccgct ccgccgcacg ctgaataacc ggtccatccg ccatcggatc
     7921 ggaaaacggc acgcccaact ccaaaatatc cgcaccgttt gcaaccatgc cgtgcatcaa
     7981 tgccaaagtt gtccgaatat cggggtcgcc caccgtaata tagggaatca atgcctttcc
     8041 gccatccaaa gcggcaaaag cctgccggat tctgctcatt tgtctcttcc atcctatcgg
     8101 caaatatgcc ataaaacaca atcagtaaat ttttcccagt ataacatttg cggtacggat
     8161 aggcgaatac ggcaaacaga aaccacgcaa atcagagccg ccgtttgaac gaggcggaaa
     8221 taaacggcaa gcatctcgga ttatagtgga ttaacaaaaa tcaggacaag gcggcgaagc
     8281 cgcagacagt acaaatagta cggagccgat tcacttggtg ctccagcacc ttagagaatc
     8341 gttctctttg agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actataacaa
     8401 aattcagaat caagacaggg caataccata ctggttttgc accaacccgc tataaaattg
     8461 cataaaaaaa atagacgctg taaaacacag cgtctatttt ttatctggcg gagtaagagg
     8521 gattcgaacc ctcgatgcag gttgacccca catgcttcct tagcagggaa gtgccttcag
     8581 cctctcagcc attactccta aggaagctgt aactataatc aacttttccg ataccgtcaa
     8641 ggaaaaatgg aaagcaaata ttaatctttt gaaataaaat aagatttacc ctgattatac
     8701 ccaatcaggc acttcttttc ttcctgaatg gaaatattcc tgactgccac atcctcaagc
     8761 aaaatgcttt tgtgcatcct gtttgatttc ctgaaaccac gcgtcttcag gaaaacgtgc
     8821 aagcgcggca tccaatgttg acagtaggtt ttgcgacagg gctttggtca ggtattcctc
     8881 ctcgttggct tctgccgctt tgtcgggctg ttgtgccaaa ccgtcggcac gggctttgtg
     8941 tccgtgtgcc aaatatagtg gattaacaaa aatcaggaca aggcgacgaa gccgcagaca
     9001 gtacagatag tacgacaagg cgaggcaacg ccgtactggt ttaaatttaa tccactataa
     9061 ttgagcgcgg taattttttg cgcccaaagc tgcggtatgt cgggattgtc ttcaatcatg
     9121 acggaaagga tggatacggc ggtcgccagc ctgccgccgt tcattctaag gtcgagggaa
     9181 cggttgggcg gcagggtgct gagtgtttct gccattctga accaaaattc gccactggct
     9241 tcgtcgggtg cgttcaattt gagcatttca tagtgaacct cctgatcatc gttttgcacg
     9301 agaccccata cttcagcaag gattttctgt tcttcccggc tcaagtgttg ccatttttca
     9361 atatgttgct gcatatcttt tccctttgaa tctattttat atagtctgaa atacagcgcg
     9421 aatcctgtcc aaatcctcct gcgtatctac gccggcggca ggagcttctt tggcggtttc
     9481 gacggcaatc gggtagccgt gccacaggac gcgcagttgc tccagcgatt caatggtttc
     9541 cagcggcgaa acgctcattt cggtgtagcg ttgcaggaag ccgacgcggt aggcgtagat
     9601 gccgatatgg cgcaggacgg cggtttcaaa cggcatttcg cgttttccgg cacgcattgc
     9661 atcgcgcaga tagggaatcg gggcgcggct gaagtagatg gcgttgcggt ttttgtcgag
     9721 gacgactttg acggcattgg gattcatcaa ttcgtcgaaa tcgtgcaatt cgtgggcggc
     9781 ggtcgccatt tggacgttgt tttcgacgag tacttcggcg gtgcggtcga tgagttcggg
     9841 ggcaatcagc ggctcgtcgc cctgtacgtt gacaacgacc agatgttgcg gcagcttcag
     9901 cgcggcggca gcttcagcaa ggcgcgtcgt gccgctttcg tgccggtttg aagtcatgac
     9961 gacttcgacg ccgtgcgcct gacagaccgt ctgaatatcg ggatggtcgg tggcaacaac
    10021 gacgcgcgca gctttacttt ttgccgcctg ttcggcaacg cgcacgacca tcggtttgcc
    10081 gtggatgtcc gccaaggctt ttccgggcag gcgcgacgaa tccagccgcg ccggaatcaa
    10141 tacgacgaat tcggtcatgc tttgagttcc tcttcgctca acgttcgcgc ttcgttttcc
    10201 agcatatagg gaatgccgtc tttaatcgga taggcaagct tcgcctgacg gctccacaat
    10261 tcctgtttgt cctgatgata ttccagcctg cctttggtaa cggggcagac gaggatgtct
    10321 aagaattttt tttccatagg gttgctttcg ggtttgatgg ttcaatcaat cggatgccct
    10381 cttcaatatt tcagacggct atcatttatt tctgatgcct tttcccaacc tgtccggctt
    10441 gtttacagcc cgcatcggga tttttaccgc cgcagatgat gcgccgcaac tcttccgtaa
    10501 acgcgggcag atgatgtcgc gcgattttcc ctgacaatgc agtccaagat actgctattt
    10561 cactcatcga tttcttgatt aagcgcggat ttttggcaac gacggactga ccgacaggcg
    10621 aaccgtaaaa ggcaatcatg ccgtcaattt cttcttgcgt gtatatctca cgggcattct
    10681 tcaataaagt attgcggaca gcctgtttca cttcgggcgt aatcaaatct ttcaaaacat
    10741 tctcacgata gcggttaaag gcttttgccg cctgatcttt tttcgcttcc ggcatttcgg
    10801 caagggcttt gtccgcatac ggtttaaatc cggcattaaa gccctcaatc atattttttt
    10861 ctatatcccg gtcaaaattc tgcgtatcca gccaacgcgc caacgacgcg tcgctgggcg
    10921 gggcggcaaa agcgttggtg cacaatgcca gcgtggcgaa gggcaataac aaggttttca
    10981 gtttaatatt caatccttta acgaatgatt aatgcagata aaaaatacga ccgattttct
    11041 cattcctgtc caagtggaaa tccggagatt tgggatttct gaagcctcct aggcattcct
    11101 gaaaattcga gacttagatt cccgcctgcg cgggaatgac ggcgcgaggc gttcttattc
    11161 aaatccgtaa tcactccgcc caaaccgtgc tttcagacgg ccttcggtac atcttccaac
    11221 cgctccaaca caaacgccgc caaatcaggt tcgattatcg cacaaacggg caacacccaa
    11281 acattatcgg tgcaaatgcc gtctgaaaat ttgaccgcat ctttctccgt aataatgacc
    11341 gcgtccgcat cgggcaaatc tgccgccgaa atgtcggcgt ggtcgggcag cgcgacggtt
    11401 cgcttcacgg taatgcccat attccgcaac gaatcgaaaa aacgcgccgg cttggcaata
    11461 cctgccacgg cgacgacggt ttgatttttc agacggcctg tgtccagtat ttcggacgga
    11521 ttgttcaaac ggtaaattcg tcccgcttcg atacggctgt gaaacatatt ttcagacggc
    11581 ctaaacagcg catccgcctt gccgccgctg acgacgaccg tatccaccga atccagccgc
    11641 gacaaaggtt cgcgcaaatt gccgttgggc agcaaatcca aatccgtgcg ccccgtatcc
    11701 gccgccggaa acaccgcgat ttccacatct cgccgcaggg cgtaatgctg caaaccgtcg
    11761 tccgccacaa tcagtccgat gtcgggatgc gccgccagca acgccctgcc tgcctctgca
    11821 cggctgctgc ccaccgccgt cggcgcaccg gttttgctga acagcagcaa aggctcgtcg
    11881 cccgcatctt ccgcacggct cgcggcattc aatacatgaa ccgccttgct cttgcgcccg
    11941 tagcctcggc tgatgatgcc gaccttgaca cctttttcct gcaaacccga caccagcgcg
    12001 gcggcaatcg gcgttttccc cgtcccgccc gcgtggatgt tgccgaccac gaccacaggc
    12061 acgggcagct tttcgctttg ccgttttccc gataaaaaat ccgtccgccg ttttgccgca
    12121 attttggcaa acagcccgga gagcggctta agcagaaaag acaaaaccgg ataaggtttt
    12181 tgccaatgcc gttcgataac ggtatgaaat ttgaaacaat tcggcatatt cgatacaaat
    12241 cctcgaagca aaatcagccc ggggcattaa tcatgcgtac ccgatacaga cccacctata
    12301 aacaacgcga agaccaaacc gataagcgaa ccaatcaggt aaataagcaa ctgcgcttta
    12361 cagaaattgg cgcggttcgg gttgcctctg ccgaacaccc aaacaaaaat tgaccaaagg
    12421 aatcatgaaa acaatcatcg tcaacaccca ctgccctgtc gtcatgacag gggcggtttg
    12481 ttttgaagtc tcgggcatat cgccgatatg ataacggaca gtctccatct ctttcatttt
    12541 ccagtatctt tcatttatca atctgacagc aaaatgccgc ctgaaaacag ttcagacggc
    12601 attttaaacc gcaaacggct tacagcttcc attcgcccag cttggcggcg taggcttcaa
    12661 agtcggcaat cggacgggtt gccacgccgc tttccatcgc tgctttggcg gcagccgtag
    12721 caacgcgcgg cagcaggcgg gaatcgaacg gagtcggaat caggtattcc gcgccgaatt
    12781 caaatttctt accgtaagcg gcaaccactt cttcggttac ttcttccatc gccaaatccg
    12841 ccaaagcata cacgcaggag cgtttcattt cttcgttgat ggtcgtcgcg ccgacatcca
    12901 acgcgccacg gaagatgaat gggaagcaca atacgttgtt cacttggttc gggaagtcgg
    12961 aacggccggt accgataacc acgtccggac gggtttcttt tgccagcggc ggcaggattt
    13021 ccggattcgg gttggccatg gcgaacacga tgggtttttc gttcatcgtg ttcaacattt
    13081 cgggggtcag caggttcgcg ccggagaggc ccaagaagat gtctttacct ttgacggcat
    13141 cgacaagtac gcgctggcca ttgtcttcaa cggcgtagaa ttttttggat tcgtccatgc
    13201 gatctttgtc ttcgcgggtt tggtaaatca cgcctttgga gtcgcaaacg gtcacgtttt
    13261 cgcgtttcaa gcccaaatcc agcaattggt tcaagcaggc aatcgcggcc gcacctgcgc
    13321 cggaacacac caaagtcgct tcttcgattt tacggccggt aaaacgcagg gcgttcaata
    13381 cggcagcggc ggtaatgatg gccgtgccgt gctggtcgtc gtggaatacg gggattttgc
    13441 agcgtttgcg taattcgcgt tcgatgtaga aacactcggg tgctttgatg tcttcgaggt
    13501 tgatgccgcc gaaggtcggc tctaaagcgg cgatgatgtc cacgagtttt tgcgggtctt
    13561 tttcatcgat ttcgatgtcg aacacgtcca caccggcgaa ttttttgaac aatacgcctt
    13621 taccttccat cacgggtttg cccgccagcg cgccgatgtc gcccaagccc aaaacggccg
    13681 taccgttgga aatgacggcg accaagttgc ctttggcggt gtatttgtag gcattttgcg
    13741 gatcggcatg gatttccata caaggagcgg ctacgcccgg agagtacgcc aacgccaggt
    13801 ctttagacgt ggccagagat ttggtcgggg taacggagat tttgcccgga acgggtaatt
    13861 cgtggaactt gagggcggct tctttcaatg agttttccat gtgtcaatcc tgttgcgaga
    13921 aaaagatttg aatcggactg tccgaaacgc tttcgggtca tcatgttacg ggcggttcgt
    13981 taatattgcc gacgcatcct gccttgtaac cgagcgtaat tctatcatgc cgaaagtttg
    14041 gcgcataccg ccattttcac ctgcggcact gccgtttgat tttcggcgcg ggtggatgcg
    14101 cttgtttcaa tatttgccgc attaacagcc gaaatgtccg tccaacactt tttctatgtt
    14161 gtttctgact tcatccaagc tgcggttact gtcgataatg gcgtaccgtt cgggacaggc
    14221 ggcggcacgg ttcagataaa cgctgcgcac acgcatgaag aaatctgcct gttcctgctc
    14281 gaaccggtct ttctcgcgcg actgtccgat acgcgccatc gacacttcca gcggcacatc
    14341 caacagcagg gtcaaatcgg ggcgcaaacc gccctgcacc caatgttcca aaatttcaat
    14401 gtcttcagac ggcatccccc gcccgccgcc ctgataggcg aaggttgcgt cggtaaaacg
    14461 gtcggacacg acatggatgc cgtctgaaag tgcaggcaat atcacgtctt caatatgctg
    14521 cattctggcg gcgaacatca tcagtgtttc cgcacgcaaa ccggctttgg tttcagggtt
    14581 gagcaggatt tcgcgcaagg cctcaccgac cggcgttccg cccggttcgc gcgtgaacag
    14641 cacgggcagc cccctccgtt caaaccatgc cttgatgacg gcaaggttgg tggatttgcc
    14701 ggcaccgtct atgccgtcca aagtgatgaa ttgcggtttc atgcttgcag ttccggtaag
    14761 ggtatgccgt ccgaaaacac aaacttttca gacggcatgg tttatttttt caaaatatat
    14821 ttgcgaacgg cggcgttgtg ttcggtcaaa tcatggctga actggctcaa gcccgtaccg
    14881 tccattttgg acacgaaata caggtatttt tcaccggacg gatgggcggc ggcatcgagt
    14941 gccgccttgc cgggcagcgc gatcggggtt ggcggcagac cgccgcgcgt gtaggtgttg
    15001 tacggcgtgt cgcggcgcag gtcggcttta cggattttgc ccttgtatgc cgcacccatg
    15061 ccgtaaatca cggacgggtc ggtttgcagg cgcataccga ttttcaggcg gttgacgaag
    15121 acggaagcga catggtcgcg gtcggcttca tgccctgttt ccttttcgat caggctcgcc
    15181 ataatcagca tttcataagg gtttttataa ggcagcccgt cctgcctgct ttcccatgcc
    15241 tcattcagtc ggcgttgcat cgccttgtag gcgatttggt aaatccgtaa atcgctgccg
    15301 cccgcatcga tttcgtagct gtcggggaaa aactgccctt caggattgcc gctgaaggca
    15361 tcaggggcaa cttccgccat cagtttttca ttgctccagc ctttggtgtc gtgttcgatg
    15421 tcgggcgttg cgtcgatgac tttcctcata tgcgaaaaac gcgaaccttc gataatctgc
    15481 acggtaacgg aatccggcct gccgccgcgc attttctgca agatatccca agcagacact
    15541 tccgaaggca gtctgtacgt ccccgtatac agcctgttgt gcacacccaa aacgtaggcc
    15601 gccgccgtca aaacatgcct gctgaacacg atgcggtctt cggcaagttt cctgccgacc
    15661 gacgaaatac cctggttttt ggcaatttta atcctgtatg ccctgccgtt gtctttaggg
    15721 acgaaaagca gcgcggcgaa aacggctgcc gatacggtca aaaaaacggc agaccatttc
    15781 aacaattttc tcaacatggt aggattccca gcattcggaa tacgtcttaa aattcgggcg
    15841 acagtataac ccaaattgcc cgccggacag gaagaacatc atggacaatc acgccgaagc
    15901 acactggcaa aacggctggc ttcaaagcat acgccatacc ccgtcgccca atttcagccc
    15961 gagggaaacg ggggaaacgg tttccctgat cgtgttgcac aacatttcgc tgccgccgtt
    16021 cgaatatggt acggatgcgg tggaaaagct gtttgccaac cggctcgacc ccgacggaca
    16081 tccgttcttc agcctgatac acactttgcg cgtatccagc cattttttaa tcaaacgcga
    16141 cggcgaaacg gtacagttcg tttcctgcga caatatggca taccatgccg gcgtatcctc
    16201 gtttcgcgga cgggaaaaat gcaacgcatt ttccatcggc atcgaactgg aaggctgcga
    16261 tttcgaaccc tttaccgaag cgcaataccg ttcgctcgaa gccttgttgg acgcaatctg
    16321 ccgccgctac cccatcacgg cggtaacggg gcaccaagac atcgcgcccg gccgcaaaac
    16381 cgaccccggt cattttttcg actggcggcg gatacggggg aaagggtttc ccgtggacag
    16441 aaatgccgtc tgaaaaccac agattttaga tggcatttcg gaaaatttcc gcttatttcg
    16501 acacactgct gtcagaccct gcaattttcg ttataattca aacgttataa ccggccgttc
    16561 cgtcagactg ccggaaacgc aagcccgatt taaccgcagt acccgcactt tgcgcatcct
    16621 gcatcccgaa atttaaagtg attgccatga tttacatcgt actgttcctc gccgccgtcc
    16681 tcgccgttgt cgcctacaat atgtatcagg aaaaccaata ccgcaaaaaa gtgtgcgacc
    16741 agttcggaca ctccgacaaa gatgccctgc tcaacagcaa aaccagccat gtccgcgacg
    16801 gcaaaccgtc cggcgggtca gtcatgatgc cgaaacccca accggcggtc aaaaaaacgg
    16861 caaaacccca agaccccgcc atgcgcaacc tgcaagaaca ggatgccgtc tacatcgcca
    16921 agcagaaaca ggcaaaagcc tccccgttca aaaccgaaat cgaaaccgcc ttggaagaaa
    16981 gcggcattat cggcaactcc gcccacaccg tttccgaacc ccaaaccgga cattccgcac
    17041 cgaaacctgc cgacgcgccg gcaaaacctg cacccgttcc gcaaacacct gcaaaaccgc
    17101 tgattacgct caaagaactg tcaaaagtcg aattaccctg gtttgacgtg cgcttcgact
    17161 tcatctccta tatcgcgctg accgaagcca aagaactgca cgcactgccg cgcctttcca
    17221 accgctgccg ctaccagatt gtcggctgca ccatggacga ccatttccag attgccgaac
    17281 ccatcccggg catccgctat caggcattta tcgtgggtat tcaggcagtc agccgcaacg
    17341 gacttgcctc gcaggaagaa ctctccgcat tcaaccgcca ggtggacgca ttcgcacaaa
    17401 gcatgggcgg tcagacgctg cacaccgacc ttgccgcctt tatcgaagtg gcttccgcac
    17461 tggacgcatt ctgcgcgcgc gtcgaccaga ccatcgccat ccatttggtt tccccgacca
    17521 gcatcagcgg cgtagaactg cgttccgccg taacgggcgt gggtttcgtc ctggaagacg
    17581 acggcgcgtt ccactatacc gacacgtcgg gctcgaccat gttctccatc tgctcgctca
    17641 acaacgagcc gtttaccaat gcccttttgg acaaccaatc ctataaaggc ttcagtatgc
    17701 tgctcgatat tccgcactct ccggcaggcg aaaaaacctt cgacgatttg tttatggatt
    17761 tggcggtacg cctgtccggc cagttgaacc tgaatctggt caacgacaaa atggaagaag
    17821 tttcaaccca atggctcaaa gacgtacgca cttatgtatt ggctcgtcag tccgagatgc
    17881 tcaaagtcgg tatcgaaccg ggcggcaaaa ccgcattgcg cctgttctcc taaaatcgaa
    17941 tgcaatcaaa gcggatatgt cgttacggca tatccgcttt ttttcgggta aaattcagct
    18001 gttttcaacc tatcattttt cagacgacct ttgcccgttt catcccgtat cagacaaagg
    18061 tcgtctgaaa accttctctc atgaatccaa actcaaaaca taacactaac tttaccaatc
    18121 ttcttaaacc gtctgatagt gatataaaac aatttgccgc acaacacatc cgccacctca
    18181 ccgacctgct caaccgctat gcctacgaat actacaccct cgacgcgccc agcgtacccg
    18241 atgccgaata cgacaaatta ttccgcgagc tcgaagcgtt ggaattaaac catcccgagc
    18301 tcaaactgcc cgacagtccg acccagcgcg tcggcggcga gcctttagcg ggatttgccg
    18361 aagtgcgcca cgaagtgccg atgctgtcgc tgaccaacgc tttttccccg caagatgaaa
    18421 acggcgtgtt cgaccatgcc gaaatgtacg ctttcgacca acgcgtgcgc gacggtttgg
    18481 acggcggcaa acccgaatac gttatcgaac ccaaattcga cggcctcgcc atcagcctgc
    18541 tctaccgcga cggcgtattg gtacaggcgg caacgcgcgg cgacggcaca acgggcgaag
    18601 acgttaccca aaacatcaaa accgtcgcca acatccccct gcggctgcac ggcgaaaata
    18661 cgcccgaact catcgaagta cgcggcgaag tactgatgca aaaagccgat tttgccgccc
    18721 tcaataaaag acaagccgaa aacgggcaaa aaccctttgc caatccgcgc aacgccgctg
    18781 ccggcagcct gcgccaactc gattcgcgca tcactgcgca acgcaaactg cactttttcc
    18841 cctactccgt cgcccgccag caaggcggtt tcgtcgcgga agaacacatc caagaactcg
    18901 cctatttcca agcactcggc ttcagtctgc caaatggcaa tttcggctgt ttcaaaaata
    18961 tcgacgaagt attggcgttt tacgaacaaa tgcagcaaaa acgccccgaa ctgccctacg
    19021 aaatcgacgg tatggtggtc aaagtcaaca gcttggcgca acagcgcgaa ctcggcttca
    19081 tctcacgcgc gccacgctgg gcgattgccc acaaattccc tgccgaagaa gccctgacca
    19141 ttgtcgaagc gattgacgtg caaatcggca ggacgggcgc ggtaacgccg gttgcccgat
    19201 tacaacccgt attcgtcggc ggcgtaaccg ttaccaacgc caccctgcac aatcaggacg
    19261 aagtttcccg aaaagacgtg cgcgtcggcg ataccgtcgt cgtgcgccgc gctggagacg
    19321 tgattcccga agtcgtgcgt gtgatttttg aacgccgccc gatgcaggaa accgccgttg
    19381 ctgtttcaga cggcatcggg catcggcagg acgatttgtt tgccgaaaca ccgtccgcta
    19441 atcaaaccca atccgttccg ctccacaagc cctaccgcct gccgacccat tgccccatct
    19501 gccgcagcga aatcgaacgc gaagaaggcg aagccgtcgc ccgatgcagc ggcggtatgc
    19561 tttgtcaggc acaacgcgcg caaggcttaa tccacttcgc ctcgcgcaaa gccatggaca
    19621 tcgacggctt gggtgaaaaa caaatcgaac agcttgtcgc ccaagacctc gtccgccact
    19681 tcgccgacct ctaccgcctc gatattccga ccctgcaaaa aatgaaagaa acgacggaca
    19741 aaaccgttgc cgaatcggat caaacgccgt ctgaaggcag ttcggtcggc gcgtcgggca
    19801 aacataaaaa acaaccggtc aagtgggcgg aaaacatcct cgggggcata gaatccggca
    19861 aaacgcccga actcgcgcgc ttcctgttcg cgctcggcat ccgccacgtc ggcgaacgca
    19921 ccgccaaaac gctggcgcag gcattcggca cattggaacg cgtccgccgc gcccccgaac
    19981 ccgtcctcgc ctgcctgccc gacatcggta cggtagtggc gcattccatt gcccacttct
    20041 tcgcccaagc cgaacagcag gcgatgatag acgaactgct cgccgcaggc gttgccccgc
    20101 aaacccaagc cgttaccatc ccgcccgccc gccacgccga accgcaacgc tggatcgccc
    20161 gcctgcccga cttcaaaatt agcgaaaaca aagcccaagc cttatgggaa ctcgctggta
    20221 aaaacataga aggtctacaa aacgacaaag ccctccccgc cgactggcaa gcatggcgca
    20281 gcgaaccaca aaacgccgcc ctactcgaaa acctgaaaac cttcttcgcg caaatgccgt
    20341 ctgaagacga ggcggcgcaa ggttcagacg gcatcaataa agccgtagca ggcaaaacct
    20401 ttgtattaac cggcaccctg cccacgctca aacgcgacca agcccaatcc ctaatcgaag
    20461 ccgcaggcgg caaagtttcc ggcagcgtgt ccaaaaaaac cgactacgtc gtcgccggag
    20521 aagccgcggg cagcaagctg gaaaaagcca atgccttggg cgtttccgtc ctcagcgaag
    20581 ccgaactgct taccctgctc ggctgaacct atgccgtctg aaccgccttc agacggcatt
    20641 gtccactttt ccgaaccaca ccatgcacac catttccttt ccaaaccgca cccgactcac
    20701 cgccctgccg cccctgtcgc tttacatcca catcccgtgg tgcatcaaaa aatgcccgta
    20761 ttgcgacttt aattcccaca gcctgaaaaa cggattgccc gaagccgcct atatcgacgc
    20821 gctgctgacc gacttgcagc tcgaattgcc caatatttgg ggcaggccgg tggaaacgat
    20881 ctttttcggc ggcggtacgc ccagcctgtt tcaggcggaa tcgattgacc gtttattgag
    20941 cggcgtgcgt tcgctgttgc gcttgcagcc ggaagcggaa attaccttgg aagccaatcc
    21001 ggggacattt gaaatcgaga agtttcaagg atttaaagac gcaggcatca cgcggctttc
    21061 tattggtgta cagagtttca acgacgatat gctctcaagg ctggggcgcg tccacaacgg
    21121 caaggaagcc ttaaccgcta tcgataccgc cttgaaatta tttgataaag tcaatatcga
    21181 cttgatgtat gccctgccga accaaaccgt tcagacggca ttggacgacg tacaaaccgc
    21241 tatcgctacg ggcgcgaccc acatcagcgc gtatcatctg acgatggaac cgaacacgcc
    21301 gttcggtcat acgccgccga aaggtttgcc gcaagacgaa gccgccctcg acatcgaaga
    21361 cgcggtacac ggcgcgctgg aaagcgcggg ttttgtccac tacgaaacat cggcttttgc
    21421 gaaaccagcc atgcagtgcc gccacaattt gaactactgg cagttcggcg attatttagg
    21481 cataggcgcg ggcgcgcacg gcaaaatttc ctatcccgac cgcatcgagc gcaccgtccg
    21541 ccgccgccac cccaacgact acctcgcctt aatgcaaaac cgaccgagcg aagccgtcga
    21601 acgcaaaacc gtcgccgccg aagatttgcc gtttgagttc atgatgaacg ccctgcgcct
    21661 gaccgacggc gtacccgccg cgatgttgca ggaacgcacg ggcgtaccga gtgccaaaat
    21721 catggcgcaa atcgaaacag caaggcaaaa aggcctgctg gaaaccgacc ccgccgtatt
    21781 ccgcccgacc gaaaaaggac gcttgttttt aaacgatttg ctgcaatgtt ttttatagtg
    21841 gattaacaa
//
LOCUS       DBBZXU010000023        21658 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.023, whole genome shotgun sequence.
ACCESSION   DBBZXU010000023 DBBZXU010000000
VERSION     DBBZXU010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21658
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.023"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            205..699
                     /locus_tag="ACJJDE_000752"
     CDS             205..699
                     /locus_tag="ACJJDE_000752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540710.1"
                     /translation="MENRFAKIVKDIFSFTQFVSEAENKIPNQSSRYYDCWWELEILN
                     ASALEDWEISGKPEKWEKWTEKYQTEALQSVKHLFAEEVPENNIVCDISHFLHFADWA
                     EADIPNQSRLYAEYWWEMEIFKMSVLEDWERSGKPLDWEKWQRQYRSEAFELVKKLNR
                     SKQE"
     gene            819..1952
                     /locus_tag="ACJJDE_000753"
     CDS             819..1952
                     /locus_tag="ACJJDE_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540711.1"
                     /translation="MFKKFKPVLLSFFALVFAFWLGTGIAYEINPRWFLSDTATEIPE
                     NPNAFVAKLARLFRNADRAVVIVKESIRTEENLAETVDDGPLQSEKDYLALAIRLSRL
                     KEKAKWFHVTEQEHGEEVWLDYHIGEGGLVAVSLLQRSPEAFVNAEYLYRNDRPFSVN
                     VYGGTAHGENYETTGEYRVVWQPDGSVFDASGRGKIGEDVYEHCLGCYQMAQVYLAKY
                     RDVANDEQKVWDFREESNRIASDSRDSVFYQNMRELMPRGMKANSLVVGYDADGLPQK
                     VYWSFDNGKKRQSFEYYLKNGNLFIAQSSTVALKADGVTADMQTYHAQQTWYLDGGRI
                     IREEKQGDRLPDFPLNLEDLEKEVSRYAEAAARRSGGRRDLSH"
     gene            complement(2039..2314)
                     /locus_tag="ACJJDE_000754"
     CDS             complement(2039..2314)
                     /locus_tag="ACJJDE_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540712.1"
                     /translation="MNEGEVVLTPEQIQTLYGYASRGDTYGGWRYLANLGDRYADDAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKIRLMCISVFWIVVFNL"
     gene            complement(2331..3104)
                     /locus_tag="ACJJDE_000755"
     CDS             complement(2331..3104)
                     /locus_tag="ACJJDE_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7540713.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEQTSFNNPEPMTGFE
                     HTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINLIEISVYYKKTDQGW
                     VLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERLLTYGVKKMPSAYPE
                     YEAYEDKRHIPENPYFHEFYYIKKGENPAIITHRNNRINQTEEDNYSTGVGSCINGFP
                     VRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNSSKK"
     gene            complement(3503..3778)
                     /locus_tag="ACJJDE_000756"
     CDS             complement(3503..3778)
                     /locus_tag="ACJJDE_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HGG7540714.1"
                     /translation="MNASNWSVYLILCENSAFYCGISPNPQQRLAAHTTGKGAKYTRV
                     FKPVAMRIVAGGMDKGTALRQEIAVKKLTAAQKRQLWEQAEKMPSET"
     gene            complement(3775..5058)
                     /locus_tag="ACJJDE_000757"
     CDS             complement(3775..5058)
                     /locus_tag="ACJJDE_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7540715.1"
                     /translation="MTVSKSGFIGQIFSRNMLVCIFTGFTSGLPLYFLINLIPAWLRS
                     EQVDLKSIGLMALIGLPFTWKFLWSPLMDAVRVPILGRRRGWMLLTQAGLLAALAAYA
                     FLNPRNHLPLIAGLSVLVAFFSASQDIVLDAFRREILSDEELGLGNSVHVNAYRIAAL
                     IPGSLSLVLADRMPWSEVFVITSLFMLPGLLMTLFLAREPVLPPSVPKTLKQTVVEPF
                     KEFFTRKGIASAVCVLLFIFLYKLGDSMATALATPFYLDMGFSKTDIGLIAKNAGLWP
                     AVAAGILGGVWMLKIGVNKALWIFGAVQAVTVLGFVWLAGFGHFDTVGTGERLMLAAV
                     IGAEAVGVGLGTAAFVSYMARETNPAFTATQLALFTSLSAVPRTVINSFAGYLIEWLG
                     YVPFFQLCFILALPGMLLLLKVAPWNGEKTQDAGR"
     gene            complement(5209..6627)
                     /gene="glnA"
                     /locus_tag="ACJJDE_000758"
     CDS             complement(5209..6627)
                     /gene="glnA"
                     /locus_tag="ACJJDE_000758"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HGG7540716.1"
                     /translation="MSIKNAVKLIEESEARFVDLRFTDTKGKQHHFTVPARIVLEDPE
                     EWFENGQAFDGSSIGGWKGIQASDMQLRPDASTAFVDPFYDDVTVVITCDVIDPADGQ
                     GYDRDPRSIARRAEAYLKSSGIGDTAYFGPEPEFFVFDGVEFETDMHKTRYEITSESG
                     AWSSGLHLDGQNTGHRPTVKGGYAPVAPIDCGQDLRSAMVNILEELGIKVEVHHSEVG
                     TGSQMEIGTRFATLVKRADQTQDMKYVIQNVAHNFGKTATFMPKPIMGDNGSGMHVHQ
                     SIWKDGQNLFAGDGYAGLSDTALYYIGGIIKHAKALNAITNPSTNSYKRLVPHFEAPT
                     KLAYSAKNRSASIRIPSVNSSKARRIEARFPDPTANPYLAFAALLMAGLDGIQNKIHP
                     GDPADKNLYDLPPEEDALVPTVCASLEEALAALKADHEFLLRGGVFSKDWIDSYIAFK
                     EEDVRRIRMAPHPLEFEMYYSL"
     gene            6931..7740
                     /gene="aroE"
                     /locus_tag="ACJJDE_000759"
     CDS             6931..7740
                     /gene="aroE"
                     /locus_tag="ACJJDE_000759"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0019632 - shikimate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HGG7540717.1"
                     /translation="MTALPRYSVFGNPVAHSKSPQIHRQFALQEGVDIEYGRICADIG
                     GFAQAVSTFFETGGCGANVTVPFKQEAFHLADEHSDRALAAGAVNTLILLKNGKLRGD
                     NTDGIGLANDITQVKNIAIEGKTILLLGAGGAVRGVIPVLKEHRPARIVIANRTHAKA
                     EELAQLFGIEAVPMADVNGGFDIIINGTSGGLSGQLPAVNPEIFRDCRLAYDMVYGEA
                     AKPFLDFARQSGAKQTADGLGMLVGQAAASYALWRGFTPNIRPVIEYMKAM"
     gene            7742..8443
                     /gene="mtgA"
                     /locus_tag="ACJJDE_000760"
     CDS             7742..8443
                     /gene="mtgA"
                     /locus_tag="ACJJDE_000760"
                     /EC_number="2.4.99.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016763 - pentosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HGG7540718.1"
                     /translation="MFRIVKWLIALPVGIFIFFNAYVYGNIITYRAVAPHRTAFMSMR
                     MKQFEQEGRDVALDYRWVPYNRISVNLKKALIASEDARFAGHGGFDWGGIQNAIRRNR
                     NSGKVKAGGSTISQQLAKNLFLNESRSYIRKGEEAAITAMMEAVTDKDRIFELYLNSI
                     EWHYGIFGAEAASRYFYQIPAAKLSKQQAAKLTARVPAPLYYADHPKSKRLRNKTNIV
                     LRRMGSAELPESDTD"
     gene            complement(8768..8843)
                     /locus_tag="ACJJDE_000761"
     tRNA            complement(8768..8843)
                     /locus_tag="ACJJDE_000761"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8808..8810),aa:Phe,seq:gaa)
     gene            complement(9034..9768)
                     /gene="lptB"
                     /locus_tag="ACJJDE_000762"
     CDS             complement(9034..9768)
                     /gene="lptB"
                     /locus_tag="ACJJDE_000762"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HGG7540719.1"
                     /translation="MSANVSRLVVQNLQKSFKKRQVVKSFSLEIESGEVIGLLGPNGA
                     GKTTSFYMIVGLIAADAGSVMLDGQELRHLPIHERARLGVGYLPQEASIFRKMTVEQN
                     IRAILEIRTKDKNQIDREIEKLLADLNIGHLRRSPAPSLSGGERRRVEIARVLAMKPH
                     FILLDEPFAGVDPIAVIDIQKIIGFLKSRGIGVLITDHNVRETLSICDRAYIISDGAV
                     LASGKPDDLVGNEQVRSVYLGKNFKY"
     gene            complement(9842..10372)
                     /gene="lptA"
                     /locus_tag="ACJJDE_000763"
     CDS             complement(9842..10372)
                     /gene="lptA"
                     /locus_tag="ACJJDE_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA];
                     GO_function: GO:0001530 - lipopolysaccharide binding
                     [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide transport periplasmic protein
                     LptA"
                     /protein_id="HGG7540720.1"
                     /translation="MIQKICKLFVLIAFFSASPAFALQSDSRQPIQIEADQGSLDQAN
                     QSTTFSGNVVIRQGTLNISAARVNVTRGGKGGESVRAEGSPVRFSQTLDGGKGTVRGQ
                     ANNVAYSSAGSTVVLTGNAKVQRGGDVAEGAVITYNTKTEVYTISGSTKSGAKSASKS
                     GRVSVVIQPSSTQKSE"
     gene            complement(10353..10934)
                     /gene="lptC"
                     /locus_tag="ACJJDE_000764"
     CDS             complement(10353..10934)
                     /gene="lptC"
                     /locus_tag="ACJJDE_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HGG7540721.1"
                     /translation="MKIRWRYGIAFPLILAVALGSLSAWLGRISEVEIEEVRLNPDEP
                     QYTMDGLDGRRFDEQGYLKEHLSAKGAKQFPESSDIHFDSPHLVFFQEGRLLYEVGSD
                     EAVYHTENKQVLFKNNVVLTKTADGKRQAGKVEAEKLHVDTESQYAQTDTPVSFQYGA
                     SHGQAGGMTYDHKTGMLNFSSKVKATIYDTKDM"
     gene            complement(10931..11467)
                     /locus_tag="ACJJDE_000765"
     CDS             complement(10931..11467)
                     /locus_tag="ACJJDE_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KdsC family phosphatase"
                     /protein_id="HGG7540722.1"
                     /translation="MQAISPELQARAAKIKLLILDVDGVLTDGRIFIRDNGEEIKSFH
                     TLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQV
                     GVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCD
                     LIMQAQGTLGAALNEYIK"
     gene            complement(11532..12506)
                     /locus_tag="ACJJDE_000766"
     CDS             complement(11532..12506)
                     /locus_tag="ACJJDE_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HGG7540723.1"
                     /translation="MAENGKYLDWAREVLHTEAEGLREIAAELDENFVLAADALLHCK
                     GRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSG
                     ESDEIAAIIPALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTT
                     AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGT
                     PLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHP
                     KTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAARIV"
     gene            12602..13657
                     /gene="tal"
                     /locus_tag="ACJJDE_000767"
     CDS             12602..13657
                     /gene="tal"
                     /locus_tag="ACJJDE_000767"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003695503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HGG7540724.1"
                     /translation="MTILSDVKALGQQIWLDNLSRSLVQSGELAQMLKQGVCGVTSNP
                     AIFQKAFAGDALYADEIAALKQQNLSPKQRYETMAVADVRAACGVCLAEHESTGGKTG
                     FVSLEVSPELSKDAQGTVEEARRLYAAIGCKNAMIKVPATDAGIDALEILVSDGISVN
                     LTLLFSRAQTLKAYAAYARGIAKRLAAGQSVAHIHVVASFFISRVDGALDTTLPDHLK
                     GKIAIALAKAAYQDWEQYFTTPEFAALEAQGANRVQLLWASTGVKNPAYPDTLYVDNL
                     IGAHTVNTVPDATLKAFIDHGTAKATLTEGVEEAQAQLAETAALGIDVETLANRLQED
                     GLKQFEEAFEKLLAPLV"
     gene            13811..14101
                     /locus_tag="ACJJDE_000768"
     CDS             13811..14101
                     /locus_tag="ACJJDE_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540725.1"
                     /translation="MAKALEIISPNEIYSDLIFKDPVPPHTIYRELMKLVSRNASNER
                     IADRAFDFFSSGLMDGSATEEQYNALYDLTLLEEPGMELNKDEIMALINSLK"
     gene            14118..15005
                     /gene="gluQRS"
                     /locus_tag="ACJJDE_000769"
     CDS             14118..15005
                     /gene="gluQRS"
                     /locus_tag="ACJJDE_000769"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HGG7540726.1"
                     /translation="MYTGRFAPSPTGLLHIGSLLTAVASYADARSNGGKWLVRMEDLD
                     PPREMPGAASHILHTLEAFGFEWDGEVAYQSRRYALYEETLCRLKTAGLVYPCHCSRK
                     DWQTGARRGADGFVYNGRCRNPQQRPALQGKQPAWRIRVPDRDIGFSDGIVGGYAQNL
                     ARDIGDFVLLRADGYWAYQLAVVADDAEQGVTHIVRGQDLLVSTPRQIYLQQCLDVPT
                     PQYAHLPLLTNAQGQKWSKQTLAPALDLNRREQLLRQVFRYLNLPEAPEADRPAELLD
                     WAVAHWDMGKVPKHAITAP"
     gene            complement(15075..16085)
                     /gene="dusA"
                     /locus_tag="ACJJDE_000770"
     CDS             complement(15075..16085)
                     /gene="dusA"
                     /locus_tag="ACJJDE_000770"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002943 - tRNA dihydrouridine synthesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HGG7540727.1"
                     /translation="MNDNTQTLPPRRLSVAPMLDWTDRHYRYMARQITRNTWLYSEMV
                     NAGAIVYGDKDRFLMFNEGEQPVALQLGGSDPSDLAKAAKAAEEYGYNEVNLNCGCPS
                     PRVQKGAFGACLMNEVGLVADCLNAMQDAVKIPVTVKHRIGVDRQTEYQTVADFVGTL
                     RDKTACKTFIVHARNAWLDGLSPKENRDVPPLKYDYVYRLKQEFPGLEIIINGGITTN
                     EEIAQHLQHVDGVMVGREAYHNPMVMREWDRLFYGDTRSPIEYADLVQRLYTYSQAQI
                     QAGRGTILRHIVRHSLGLMHGLKNARTWRRMLSDATLLKDNDGGLILEAWKEVERANM
                     RE"
     gene            complement(16116..16607)
                     /gene="dtd"
                     /locus_tag="ACJJDE_000771"
     CDS             complement(16116..16607)
                     /gene="dtd"
                     /locus_tag="ACJJDE_000771"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HGG7540728.1"
                     /translation="MRAVIQKTVGAKVDVVSENGTETCGKIDGGFVVLLGVTHSDTEK
                     DARYIADKIAHLRVFEDEAGKLNLSLKDVGGAVLLVSQFTLYADATSGRRPSFSQAAP
                     AEQAQQLYLRTAELLRGHGIHVETGRFRTHMQVSLCNDGPVTILLDSFMTRISPKMKV
                     VPD"
     gene            complement(16681..17439)
                     /locus_tag="ACJJDE_000772"
     CDS             complement(16681..17439)
                     /locus_tag="ACJJDE_000772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7540729.1"
                     /translation="MKQKKTAAAVIAAMLAGFAAAKAPEIDPALVDTLVAQIMQQADR
                     HAEQSQKPDGQAIRNDAVRRLQTLEVLKNRALKEGLDKDKDVQNRFKIAEASFYAEEY
                     VRFLERSETVSESALRQFYERQIRMIKLQQVSFATEEEARQAQQLLLKGLSFEGLMKR
                     YPNDEQAFDGFIMAQQLPEPLASQFAAMNRGDVTRDPVKLGERYYLFKLSEVGKNPDA
                     QPFELVRNQLEQGLRQEKARLKIDAILEENGVKP"
     gene            complement(17510..18376)
                     /locus_tag="ACJJDE_000773"
     CDS             complement(17510..18376)
                     /locus_tag="ACJJDE_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7540730.1"
                     /translation="MKAKILTSVALLACSGSLFAQTLATVNGQKIDSSVIDAQVAAFR
                     AENSRAEDTPQLRQSLLENEVVNTVVAQEVKRLKLDRSAEFKNALAKLRAEAKKSGDD
                     KKPSFKTVWQAVKYGLNGEAYALHIAKTQPVSEQEIKAAYDNISGFYKGTQEVQLGEI
                     LTDKEENAKKAVADLKAKKGFDAVLKQYSLNDRTKQTGAPVGYVPLKDLEQGVPPLYQ
                     AIKDLKKGEFTATPLKNGDFYGVYYVNDSREVKVPSFDEMKGQIAGNLQAERIDRAVG
                     ALLGKANIKPAK"
     gene            complement(18425..18703)
                     /locus_tag="ACJJDE_000774"
     CDS             complement(18425..18703)
                     /locus_tag="ACJJDE_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7540731.1"
                     /translation="MPAVDLIRERLQTLDPLVLEIGDESHLHKGHAGNTGGGHYAVLV
                     VSGRFEGVSRLNRQKTVKSLLKDLFSGGMIHALGIRAATPDEYFHTAD"
     gene            complement(18703..18993)
                     /locus_tag="ACJJDE_000775"
     CDS             complement(18703..18993)
                     /locus_tag="ACJJDE_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HGG7540732.1"
                     /translation="MEYFMLLATDGENVYEARMAARPEHLKRLETLKSEGRLLTAGPN
                     PLPEDSNRVSGSLIVAQFESLDAAEAWAEDDPYVHAGVYSEVLIKPFKAVFK"
     gene            complement(18996..19526)
                     /locus_tag="ACJJDE_000776"
     CDS             complement(18996..19526)
                     /locus_tag="ACJJDE_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HGG7540733.1"
                     /translation="MKFVSDLFSVILFFATYTVTKNMITATAVALVAGVVQAAFLYWK
                     YKKLDTMQWVGLVLIVVFGGATIVLGDSRFIMWKPSVLFWLGALFLWGSHLAGKNGLK
                     ASIGREIQLPDAVWAKLTYMWVGFLIFMGIANWFVFTRFESQWVNYKMFGSTALMLVF
                     FIIQGIYLSTCLKKED"
     gene            19815..>21658
                     /gene="tspA"
                     /locus_tag="ACJJDE_000777"
     CDS             19815..>21658
                     /gene="tspA"
                     /locus_tag="ACJJDE_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FimV/HubP family polar landmark-like protein
                     TspA"
                     /protein_id="HGG7540734.1"
                     /translation="MKNNRQIKLIAASVALAASFQAHAGLGGLNIRSNLDEPFSGSIT
                     VTGEEAKALLGGGSVTVSEKGLTAKVHKLGDKAVIAVSSAQAVRDPVLVFRIGAGAQV
                     REYTAILDPVGYSPKTKSALSDGKTHRKTAPTAESQENQNAKALRKTDKKDSANAAVK
                     PAHNGKTHTVRKGETLKQIAAAIRPKHLTLEQVADALLKANPNVSAHGRLRAGSVLHI
                     PNLNRIKAEQPKPQTAKPKAETASMPSEPSKQATVEKPVEKPEAKVAAPEAKAEKPAV
                     RPEPVPAANTAASETAAESAPQEAAASAIDTPTDETGNAVSEPVEQVSAEEETESGLF
                     DGLFGGSYTLLLAGGGAALIALLLLLRLAQSKRARRTEESVPEEEPDLDDAADDGIEI
                     TFAEVETPATPEPAPKNDVNDTLALDGESEEELSAKQTFDVETDTPSNRIDLDFDSLA
                     AAQNGILSGALTQDEETQKRADADWNAIESTDSVYEPETFNPYNPVEIVIDTPEPESV
                     AQTAENKPETVDTDFSDNLPSNNHIGTEETASAKPASPSGLAGFLKASSPETILEKTV
                     AEVQTPEELHDFLKVYETDAADDLSALLQPAEALSVEENITETVAETP"
BASE COUNT         5291 a         5858 c         5437 g         5072 t
ORIGIN      
        1 gttatcagct cgacagaacc tgtattttat tcaaaataac aaattatcaa acaaagctct
       61 gattaaaaac ccaacaatca aaatgccgtc tgaagcggta ttcggctttc agacggcatt
      121 ttctccgatt agcacaggat gccggggctt gccggcttga ttttgccgaa attgttggca
      181 cgcaattggg aggggcggca acctatggaa aatagatttg caaaaatcgt taaggatatt
      241 tttagtttta cccaatttgt ttccgaagcg gaaaataaaa ttcctaacca atcctctcgt
      301 tattacgatt gctggtggga attggaaatc ttgaatgctt ccgcattgga agattgggaa
      361 atatcgggaa agcctgaaaa atgggagaaa tggacagaaa aatatcagac cgaagcgtta
      421 cagtcagtca agcatctatt tgccgaagaa gttcctgaaa ataatatagt ttgcgatatt
      481 tctcattttt tgcattttgc cgattgggca gaagccgaca ttcccaatca atcacgttta
      541 tatgccgaat attggtggga aatggaaatt ttcaaaatgt cggttttaga agattgggaa
      601 cgctcgggaa aaccgttaga ttgggaaaaa tggcaaaggc aatatcgatc tgaagcattt
      661 gaattagtta aaaaattgaa ccgaagcaaa caagagtaac aagccgcagc ctgcataggg
      721 gtttttaaag tacggcagca accgtagatt aaattaaaaa tcaaacaatc aaagctcgtc
      781 tgatataatc gatatattct gttaaacgaa aaataaatat gtttaaaaaa ttcaaaccgg
      841 tattgttgtc attttttgca cttgtatttg ccttttggct gggaacgggt attgcctatg
      901 agattaatcc gcgttggttt ttgagcgata cggcaactga aatacctgaa aatccgaatg
      961 cttttgtggc gaaacttgcc cgcctgttcc gaaatgccga cagggcggtt gtcatcgtga
     1021 aggaatcgat aaggacggag gaaaatcttg ccgaaactgt ggatgacggt ccgttgcagt
     1081 cggagaagga ttatcttgca ctcgctatcc ggctcagtcg tttgaaagaa aaggcgaaat
     1141 ggtttcacgt aacggagcag gaacatgggg aagaggtttg gctggattac catatcggcg
     1201 agggcggttt ggttgcggtt tcgcttttgc aacgctcgcc ggaagcgttt gttaatgccg
     1261 aatatctgta tcggaacgat cgtccgtttt ctgtaaatgt gtacggcgga acggctcacg
     1321 gagaaaatta tgaaacgaca ggagaatatc gggttgtttg gcaaccggac ggttcggtat
     1381 ttgatgcgtc ggggcgcggg aaaatcgggg aagatgttta tgagcattgt ctcgggtgtt
     1441 atcagatggc ccaggtatat ttggcgaaat atcgggatgt cgcgaatgat gagcagaagg
     1501 tttgggactt ccgcgaagag agcaaccgga ttgcgtcgga ctcgcgcgat tctgtgtttt
     1561 atcagaatat gcgggaattg atgccccggg ggatgaaggc gaacagtctt gtggtcggct
     1621 atgatgcgga cggtctgccg caaaaagtct attggagttt cgacaatgga aaaaaacgcc
     1681 agagtttcga atattatttg aaaaacggaa atctttttat tgcacaatct tcgacggtag
     1741 cattgaaagc ggatggcgta acggcggata tgcagaccta tcatgcgcaa cagacgtggt
     1801 atttggatgg cgggcggatt atccgcgaag agaaacaggg agacagactg cctgattttc
     1861 ctttgaactt ggaagatttg gaaaaagagg tgagccgtta tgcagaggct gcggcgagac
     1921 gttcgggcgg caggcgcgac ctttctcact gaacgcaaat gccgtctgaa accggttttc
     1981 agacggcatt ggagagtcaa acgctttttg caatgccgta tatgccgaat ccgattcgct
     2041 acaaattgaa aaccacaatc caaaaaacgg aaatacacat taaacggatc tttttaccga
     2101 ccgtatcatc ccataggttt tccacacctt ttttcatcca taaattcaaa ccatttaagt
     2161 ttgcatcctt accgacaatt gcagcagcat catccgcata acggtcaccc aaattagcca
     2221 aataacgcca accgccatag gtatcgccac gggaagcata accatacaag gtttggattt
     2281 gttctggtgt taaaacaact tcaccctcat tcataataag atcctttaaa ttatttttta
     2341 cttgaattgt ttacaaaact ctgtaccaat tgctctactt gttggtgata acctaccaac
     2401 tcctgctgtg tgagctgctg cttttcccga ataaacgggt aataccgtac cgggaaaccg
     2461 ttaatacagg aacctacgcc agtgctgtaa ttatcttctt cagtttggtt tattcgatta
     2521 ttccgatgag taataatcgc cggattttct ccttttttaa tatagtaaaa ttcatgaaaa
     2581 tatggatttt caggaatatg tcttttatct tcataagcct cgtattcagg ataggcagat
     2641 ggcatttttt taaccccgta agtaagcaat ctttctccca tagtcgtgct taaactacac
     2701 gcatcttttc ggataacaat atcgtccacg ctatccaaac cgtcgcgtag aaattggata
     2761 aagtgtgctt tgttttgctg gttgtatggc tcaagaaccc aaccttggtc ggtttttttg
     2821 taatagacgc taatctctat caaattaatg gagtaagcat cctgcccggg cgtgtcggaa
     2881 agccattttg tggcattgtc ttgcgtatac cgtgcaagat agccataggg gataaccatt
     2941 ttggtgccct gaaaatcaaa tgtaaccgta tgttcaaatc ctgtcattgg ctcgggattg
     3001 ttgaaactgg tttgttcatt aacaggttca catgaggtca tagtaaaaac actcccaata
     3061 aacaaaataa aaagttgata aatagtagta gcatatggtc tcataatttc aagcctagaa
     3121 attagttaaa gaatatatta tggtagatac taactcttta agttgacata ttgtgcgata
     3181 tcgagggctg taccgtattt tcccatcgta ttttcccatc gtattttccc gttctttata
     3241 tgagcggcag gcatcctcat aaaagaaggg ataccgataa ggaaaaatac cccagcataa
     3301 aaaatatact gattaatcaa tacaaatcca acaaacagtt catcgtattc ttttctgttg
     3361 gcgtataaaa aatactgata tatgccttca ctttcatagg gcgacgcttt atgtaccgtc
     3421 ctgtgtgttg aaacgtcggt tttccttacc gcctgccccg cttttccctg attgctgcca
     3481 actgccgtcc gaacttgaac cgtcaggttt cagacggcat tttttctgcc tgctcccaca
     3541 attgccgttt ttgtgcggcg gtcagttttt tgacggcgat ttcctgcctg agtgccgttc
     3601 ctttatccat cccgcctgca acgatacgca tcgccaccgg tttgaatacg cgggtatatt
     3661 tcgcgccttt accggttgtg tgggcggcaa gccgctgttg cggattcggg ctgatgccgc
     3721 aatagaacgc gctgttttca cacaatatca ggtaaacgct ccagtttgac gcgttcatct
     3781 gcctgcatcc tgagttttct ccccgttcca aggcgcaact ttcagcagca gcagcatacc
     3841 cggcagggca agtatgaaac acagctggaa aaacggtaca tacccgagcc attcaatcag
     3901 ataaccggca aaggaattga tgaccgtacg gggaacagcg gacaggctgg taaacagtgc
     3961 aagctgcgtt gcggtaaatg cgggattggt ctcgcgcgcc atatacgata caaacgccgc
     4021 cgtccccaaa cccacgccga ctgcctctgc gccgataact gccgccagca tcagcctctc
     4081 gcctgtgccg accgtgtcga aatgtccgaa ccctgccagc catacaaacc ccaaaacggt
     4141 tacagcctgc accgcgccaa atatccacaa ggctttgttt acgccgattt tcagcatcca
     4201 cacgccgccc aagatacctg ccgccactgc cggccacagt cctgcgtttt tggcaatcaa
     4261 accgatgtcg gtcttgctga aacccatatc cagataaaac ggcgttgcca acgcggttgc
     4321 catactgtcg ccgagtttgt aaaggaagat aaacagcagc acgcatacag ccgaagcgat
     4381 gcccttgcgt gtaaaaaatt ctttaaacgg ctctaccact gtctgcttca acgttttagg
     4441 aacggaaggc ggcaacacgg gttcgcgcgc gagaaacagc gtcatcagaa ggccgggcag
     4501 cataaataat gaagtgataa caaatacttc tgaccacggc atcctgtctg ccaacaccaa
     4561 actcaatgaa ccgggaatca gggcggcaat ccggtaggcg ttcacatgga ctgagttgcc
     4621 caaacccaat tcctcgtccg acaaaatctc gcgcctgaac gcatccaata caatatcctg
     4681 actggcggaa aaaaaagcga caagcaccga caagccggca atcaacggca gatgattccg
     4741 ggggtttaaa aaggcatagg ccgccaaagc cgccagcaac cctgcctgcg tcaacagcat
     4801 ccacccgcgc cgccggccca aaatgggaac cctgaccgcg tccatcagcg gagaccacaa
     4861 aaatttccaa gtaaacggca gaccgatcag cgccatcagc ccgatgctct tcaaatccac
     4921 ctgctcgctg cgcaaccatg ccggaatcag gttaatcaga aagtacagcg gcagccccga
     4981 ggtaaacccc gtaaaaatac agacaagcat atttcgggaa aagatttgcc cgataaaacc
     5041 tgatttcgat acagtcatgg ttcaaacagc caagaaataa aagcctattg tagcaaatat
     5101 cgcccaaccg ctgaaaaaca ccgaccctgc tccgccgttt tgccgttcaa atgcaaaatg
     5161 ccgtctgaaa ctttgttcag acgacatttc tactgaaacc tgagagtttt acaggctgta
     5221 atacatttca aattccagcg gatgcggtgc catgcggatg cggcggacat cttcctcttt
     5281 aaaggcgatg tagctgtcga tccagtcttt gctgaatacg ccgccgcgca ggaggaattc
     5341 gtggtcggct ttgagggcgg cgagggcttc ttccaaagag gcgcagacgg tcggcaccaa
     5401 tgcatcttct tccggcggca gatcgtacag gtttttatcg gcagggtcgc ccggatgaat
     5461 tttgttttga ataccgtcca aaccggccat caacaaagcg gcgaacgcca agtatgggtt
     5521 ggcggtcgga tcggggaaac gcgcttcgat gcggcgcgcc ttgctgctgt tcacggacgg
     5581 aatgcggatg gaagcggaac ggtttttggc ggaataagcc agtttggtcg gcgcttcaaa
     5641 gtgcggcaca aggcgtttgt aggagttggt ggacggattg gtaatcgcgt tcagggcttt
     5701 ggcgtgtttg atgatgccgc cgatgtaata aagggcggtg tcgctcaaac cggcatagcc
     5761 gtcgccggcg aacaggtttt gaccgtcttt ccagatggat tggtgaacgt gcataccgct
     5821 gccgttgtcg cccataatcg gtttgggcat gaaggtggcg gttttgccga agttgtgggc
     5881 aacgttttga atcacatatt tcatgtcttg ggtttggtcg gcgcgtttaa ccaaagtggc
     5941 gaagcgcgtg ccgatttcca tttggctgcc ggtaccgact tcgctgtggt ggacttcgac
     6001 tttgatgccg agttcttcca aaatgttcac catggcggag cgcaaatctt gaccgcagtc
     6061 aatcggggca acgggcgcgt aaccgccttt gacggtcgga cggtggccag tattttgacc
     6121 gtccaaatgc aagccgcttg accatgcgcc gctttcggaa gtgatttcgt aacgggtttt
     6181 gtgcatgtcg gtttcaaatt ctacgccgtc aaaaacgaag aattcaggct cggggccgaa
     6241 ataggcggtg tcgccgatgc cggaagattt caaataggct tcggcgcggc gggcgatgga
     6301 gcgcgggtcg cggtcgtaac cctgaccgtc ggcagggtcg atgacgtcgc aggtaatgac
     6361 gacggtaaca tcatcataaa aaggatcgac gaaggctgta gacgcatcgg gacgcagctg
     6421 catatcggaa gcctgaatgc ctttccagcc gccgatagac gaaccgtcaa acgcctgacc
     6481 gttttcgaac cactcttcgg ggtcttccaa cacgatgcgc gcaggcacgg taaagtggtg
     6541 ctgcttgcct ttggtatcgg taaagcgcaa atcgacaaag cgggcttcgc tttcttcaat
     6601 caattttacg gcgtttttaa tagacatttt tcagctcctg gaaaagggaa atagcaaaat
     6661 atgcggaacg cggcggcttg acgcaaagtc ggcatgattc taccacgtcc atgccgtctg
     6721 aaactcgccc tgcgtcaaat ttcaagctgg aaaatatagt ttcagacggc aagattgtca
     6781 acaatatgga taaaattgca tatcatgtcc ggatttctcc ccagcttata cagggaaaaa
     6841 ccgtaccgcc tgacaaccgt ttcagacggc atcgtttcca tctgtacgcc gccgttataa
     6901 aatagccttc ccgtcttttg gaacacgacc atgaccgccc tcccccgtta ctccgttttc
     6961 ggcaaccccg ttgcacacag taaatctccg cagattcatc ggcaatttgc ccttcaggaa
     7021 ggcgttgaca tcgaatacgg acgcatttgc gccgacatcg gcggtttcgc tcaggcggtt
     7081 tcgacatttt ttgaaacagg cggttgcggg gcaaacgtta ccgtaccgtt caaacaggaa
     7141 gcgtttcatc tggcggacga acattccgac cgcgctttgg cagcaggtgc ggtcaatacg
     7201 ctgattctgt tgaaaaacgg caagctgcgc ggcgacaata ctgacggtat cggtttggcc
     7261 aacgacatca cgcaggttaa aaacattgcc atcgagggca aaactatttt acttttgggc
     7321 gcgggcggtg cggtgcgcgg cgtgattcct gttttgaaag aacaccgtcc tgcccgtatc
     7381 gtcattgcca accgtaccca tgccaaagcc gaggaattgg cgcagctttt cggcattgaa
     7441 gccgtcccga tggcggatgt gaacggcggt tttgatatca tcatcaacgg cacatccggc
     7501 ggtttgagcg gtcagcttcc ggccgtcaat cctgaaattt tccgcgactg ccgccttgcc
     7561 tacgatatgg tgtacggcga agcggcaaaa ccgtttttgg attttgcccg gcaatcgggc
     7621 gcgaaacaaa ccgccgacgg actgggtatg ctggtcggtc aggcggcggc ttcctacgcc
     7681 ctctggcgcg gatttacgcc caatatccgc cctgttatcg aatacatgaa agccatgtaa
     7741 tatgttccgc atcgtcaaat ggctgattgc cctgcccgtc ggcatcttta tctttttcaa
     7801 tgcctatgtg tacggcaaca tcatcaccta ccgcgccgtc gcgccgcatc ggactgcctt
     7861 tatgtcgatg cggatgaagc agtttgaaca ggaaggtcgc gatgtcgcac tggattaccg
     7921 ctgggtaccc tacaaccgca tctcggtcaa cctgaaaaaa gccctgattg cttccgaaga
     7981 tgcccgtttc gccggacacg gcggcttcga ttggggcggc attcaaaacg ccatcaggcg
     8041 caaccggaac agcggcaaag tgaaggcggg cggttcgacc atcagccagc agcttgccaa
     8101 aaacctgttt ttaaacgaaa gccgcagcta tatccgcaaa ggcgaagaag cggcgattac
     8161 cgcgatgatg gaagctgtta ccgacaaaga caggattttt gaactgtatt taaactcaat
     8221 cgagtggcac tacggtattt tcggcgcgga agccgcgtcc cggtattttt atcaaatacc
     8281 cgccgccaaa ctgagcaaac agcaggcggc gaaactgacg gcgcgcgtcc ccgccccgct
     8341 ctactacgcc gaccatccga aaagcaaacg gctgcgcaac aaaaccaata tcgtgctcag
     8401 acgcatgggt tcggcagaat tgcctgaaag cgacacggac tgattgtttc agatatggaa
     8461 atgccgtctg aactgcggtt cggacggcat atgttttctg gtttttatag tggattaaca
     8521 aaaatcagga caaggcgacg aagccgcaga cagtacaaat agcacggaat cgattcactt
     8581 ggtgcttcag caccttagag aatcgttctc tttgagctaa ggcgagccaa cgctgtaccg
     8641 gtttaaattt aatccactat acctgcccga cagccgcaaa gaccgtatca tacatagcag
     8701 gcattgcggt gcgggattac tgccgcaaac ggcaggcaaa aaaaataacc gcttcaaggc
     8761 ggttttttgg tggccagagg cggaatcgaa ccgccgacac acggattttc aatccgttgc
     8821 tctaccaact gagctatcta gcctttatct gtcttgttaa gagatgcgta ttaaaccaaa
     8881 tttcgggaca acacgcaagc ggatttgtcg atatttttta tccaaccgac taagtcgatg
     8941 ttttaagttt aaattaattt cacagaaaaa tagtgcaaat cggttttttg ccgtttgttc
     9001 ggcgatattc tgcttttcag acggcaaaac gcttcaatat ttgaagttct tacccagata
     9061 aacagaacga acctgttcgt ttccgaccaa atcatcaggt tttcccgatg ccagcaccgc
     9121 accgtctgaa atgatgtagg cgcggtcgca gatgctgagg gtttcgcgga cgttgtggtc
     9181 ggtaatcagt acgccgatgc cgcgcgattt gaggaaaccg atgattttct ggatgtcgat
     9241 gacggcaatc ggatcgacgc cggcaaaagg ttcgtccaac aaaataaaat gcggtttcat
     9301 ggcgagtacg cgggcgattt cgacgcgtcg gcgttcgccg ccggacagcg acggcgcggg
     9361 gctgcggcgc aagtgtccga tattaaggtc ggcgagcagt ttttcgattt ccctgtcgat
     9421 ttgattttta tctttggttc tgatttccaa gatggcgcgg atgttttgtt cgacggtcat
     9481 tttgcggaat atcgaggctt cctgcggcag gtagccgaca ccgaggcggg cgcgttcgtg
     9541 tatgggcagg tgacgcaatt cctgcccgtc cagcatcacg ctgcccgcat cggcggcaat
     9601 gagtccgact atcatgtaga agctggtggt tttacccgca ccgttgggcc cgagcagtcc
     9661 gatgacttcg ccgctttcga tttcgaggga gaagctttta acgacttggc gttttttaaa
     9721 acttttttgc aggttttgaa caacaaggcg gctgacgttt gcgctcataa atatctcttc
     9781 aatatcttcg gtcggcatat gccgtccgaa ccgggtttat gtttcagacg gcattttggg
     9841 attattcgga tttttgcgta ctcgaaggct ggataacgac gctgaccctg ccggatttgg
     9901 aagcggattt tgcgccggat tttgtgctgc cgctgatggt atagacttcg gttttggtgt
     9961 tgtatgtaat caccgcacct tcggcgacat cgccgccgcg ctgtactttg gcattaccgg
    10021 ttaagactac ggtgctgcct gcagatgaat aagcaacgtt gtttgcctgt ccgcgcaccg
    10081 tgcctttgcc gccgtccaat gtctggctga agcggactgg cgaaccttcc gccctcacgg
    10141 attcgccgcc tttgccgccg cgtgtaacat tgacgcgggc ggcggaaata ttgagcgtac
    10201 cctgtctgat gacgacgttt ccgctgaatg tggtgctttg gttggcttga tcgagcgaac
    10261 cttggtcggc ctcaatctga ataggctgcc tgctgtcgct ttgaagggca aaagcggggg
    10321 acgccgaaaa aaatgctatt aaaacaaata gcttacatat cttttgtatc ataaatcgtg
    10381 gctttcactt tagatgagaa gttcaacatg cctgttttgt ggtcgtaagt catgccgccc
    10441 gcctgaccgt gcgatgcacc atattggaaa ctgacaggcg tatcggtttg ggcatattga
    10501 gattcggtat cgacgtgcag cttttcggct tcaactttac ccgcctgccg tttgccgtcg
    10561 gcggttttgg tcagcacaac gttgttttta aaaagaacct gtttgttttc ggtatggtaa
    10621 acggcttcgt cgctgccgac ttcgtacaac aacctgcctt cttggaagaa cacgagatgc
    10681 ggcgaatcaa aatggatgtc gctgctttcg ggaaactgtt tcgcgccttt cgcgctcaaa
    10741 tgttctttta agtatccctg ttcgtcaaac cgcctgccat ccaatccgtc cattgtgtat
    10801 tgcggttcgt cgggattgag cctgacttct tcaatctcga cttcgctgat gcgtcccaac
    10861 catgccgaca ggctgcccaa ggcaaccgcc aatatcaatg ggaacgcaat tccgtaccgc
    10921 catcttattt tcatttgatg tactcgttca aagccgcgcc caaagtccct tgcgcctgca
    10981 taatcaggtc gcacacttcg cgcaccgcgc ccgcaccgcc ggggcgtttg gcaatatagg
    11041 cggcgtgttg cagcgtaaac caatgcgcgt cggggacggc aaccggcaat ccgcaacgca
    11101 ccatcaccgg caaatcgacc acgtcgtcgc cgacaaaggc acactcggct tcttccacgc
    11161 cgacctgagc gcgcagctct tcatacgcgg cgcgtttgtc cgaaatgcct ttgaagtagt
    11221 aatttatgcc caactgtttg acgcggatgc cgacggaggg cgcgtcccga cctgtgataa
    11281 tcgcagtctg cacgccgctt gcctgaagca ttttcagacc gtgtccgtcc agtgtgtgaa
    11341 acgatttgat ttcttcgccg ttatcgcgga taaagatgcg cccgtcggtc aaaacgccgt
    11401 ccacatccag gatcagcagt ttgattttgg cggcgcgcgc ctgtaattcg ggagaaattg
    11461 cctgcatggg atttccttgt tttcagacgg catatcttac cacaaatgcc gtctgaaacg
    11521 gctgcaacgc cttatacaat ccgcgccgcc aaaaggtcgt gcatattcag cgcaccgatc
    11581 agcacgccgt ctgcatcggt aaccagaagc ccgttcacat ggtttgcctg catgactttc
    11641 agggcttcgg tggcgaggcg ttcggcggcg atggttttag ggtgtgtatg catgacttcg
    11701 tctatcgaaa gaccggtaaa attgtcgcat tcttgaaaca ggcggcgcaa atcgccgtcg
    11761 gtgaatacgc ctttcagacg gccttgcccg tccgttaccg ccagcatccc cagccctttt
    11821 tcactcatgc tgacgatggc ttctttcaag ggcgtgccga gtcggacggc aggcaggccg
    11881 ccgcctttgt gcataatgtc ggcaacgcgc aaaagtaggc gtttgccgag gctgccggca
    11941 ggatggctca aggcgaaatc gtcgggcgtg aacgcgcgtg cgcgcagcag gacgaccgcc
    12001 aacgcatcgc ccaaagccat gacggcggtg gtgctggtgg tcggggcaag ccccagcggg
    12061 caggcttctt tggaaaccga cgccgtgatg tggatgtcgg catggcgcgc catggttgaa
    12121 tcggggcggg cggtgatgca gacaagcgtg atgtctttgc gtttgagcgc ggggatgatg
    12181 gcggcgattt cgtcgctttc gccggaattg gaaatcgcga cgaccacgtc gttgtccaca
    12241 atcatgccca aatcgccgtg tgccgcttcc gcagggtgga cgaaaaacgc gggcgtgccg
    12301 gtcgaggcca tggttgccgc cattttgcgc ccgatatgtc ccgacttgcc catgcccgtg
    12361 ataacaaccc tgcccttgca gtgcaacaac gcgtctgccg caaggacgaa gttttcgtcc
    12421 aattccgctg caatttcgcg caagccttcc gcttcggtgt gcaacacttc gcgcgcccag
    12481 tcgagatatt ttccgttttc tgccattgcc atccgccttt gctgtaacaa aactacccaa
    12541 aatttccgaa tcggggtagc ataagcattc aaaccccgcc atccatccaa aggaatcaga
    12601 aatgactatt ttatcggacg ttaaagcatt aggacaacaa atctggctgg acaacctttc
    12661 ccgctcgctc gtgcaaagcg gcgaattggc gcaaatgctg aaacaaggcg tgtgcggcgt
    12721 aacttccaat cccgccatct tccaaaaagc cttcgccggc gacgcgcttt acgccgatga
    12781 aatcgccgcc ctcaagcagc aaaacctcag ccccaaacaa cgctacgaaa ccatggcggt
    12841 tgccgatgtg cgtgccgcct gcggcgtttg ccttgccgaa cacgaatcca ccggcggcaa
    12901 aaccggtttc gtcagcctcg aagtttcgcc cgaattgtcc aaagacgcgc aaggcacggt
    12961 agaagaagcg cgccgcctct acgccgccat cgggtgcaaa aacgcgatga ttaaagtgcc
    13021 tgccaccgac gcaggcatcg atgcgctcga aatcctcgtt tcagacggca tcagcgtaaa
    13081 cctcacgctg ctgttctcac gcgcccaaac cctcaaagcc tacgccgcct acgcgcgcgg
    13141 cattgccaaa cgcttggcag ccggacaaag cgttgcccat atccacgtcg tcgccagctt
    13201 cttcatctcc cgtgtggacg gcgcgctgga cacaacgctg cccgaccacc tcaaaggcaa
    13261 aatcgccatc gcccttgcca aagccgccta tcaagattgg gaacaatatt tcaccacccc
    13321 cgaatttgcc gcactggaag cccaaggcgc aaaccgcgtg cagcttttat gggcatctac
    13381 cggcgtgaaa aacccagcct atcccgacac gctctacgtt gacaacctga tcggcgcgca
    13441 caccgtcaac accgttcccg atgccacgct caaagccttt atcgaccacg gcacagccaa
    13501 agccacgctg accgaaggcg tagaagaagc acaagcgcag cttgccgaaa ccgccgcgct
    13561 cggcatagac gtagaaaccc tcgccaaccg cttgcaggaa gacggtttga aacaatttga
    13621 agaagcgttt gaaaaactgc tcgcaccgtt ggtttaaact tttcatcccc gatgccgtct
    13681 gaaaggcttt cagacggcat cgcccttttg accggacaca gtgcggcata tcaaggattc
    13741 gccctaaaaa tattaatcaa caagaagtta atgcacgaca ttacccacta acacaaaagg
    13801 aaatagaatc atggcaaaag cactcgaaat catttcaccc aatgaaattt attcagatct
    13861 gatttttaag gatccggtac ctccccatac tatatataga gaattgatga aactggttag
    13921 tagaaatgca agtaatgaga gaatcgcaga tagagccttc gattttttct cgtccggcct
    13981 tatggatggt tcagctaccg aagagcaata taatgcccta tatgatttaa ccttgcttga
    14041 agagcccggg atggaactga ataaagatga gataatggct ttgattaata gtcttaaata
    14101 aaggggctgt accagatatg tacacaggac gttttgcccc cagcccgacc gggctgctcc
    14161 acatcggctc gctgctgacc gccgtcgctt cctatgccga tgcacgctca aacggcggca
    14221 aatggctggt ccgcatggaa gacctcgatc cgccgcgcga aatgccgggg gcggcaagcc
    14281 atatcctgca cacgcttgag gcattcggat tcgagtggga cggagaagtc gcctatcaga
    14341 gccgccgtta cgccctgtat gaagaaacac tatgccgcct gaaaaccgcc ggactggtct
    14401 atccctgcca ttgcagccgc aaagactggc agaccggggc aaggcggggc gcagacgggt
    14461 tcgtctataa cggacgctgc cgcaatccgc agcaacgccc tgcactgcaa ggcaaacagc
    14521 cggcgtggcg catccgcgtc cccgaccgcg acatcggctt ttcagacggc atcgtcggcg
    14581 gttacgccca aaacctcgcc cgcgacatcg gcgatttcgt cctgcttcgt gcagacggtt
    14641 actgggcata ccaactcgcc gtcgttgccg acgatgccga acagggcgtt acccacatcg
    14701 tccgcggaca agacctgctt gtttctacgc cgcgccaaat ctatttgcag cagtgtttgg
    14761 acgttccgac accgcaatat gcccacctgc cgctgctgac caacgcacaa gggcagaaat
    14821 ggtcgaaaca gacgctcgca cccgcattgg atttaaaccg ccgcgaacaa ctcctccgcc
    14881 aagtgttccg ttacctcaac ctgcccgaag caccggaagc cgaccgccct gccgaactgc
    14941 tcgactgggc ggtggcacac tgggatatgg gcaaagtgcc gaaacacgcc attaccgccc
    15001 cctaaacacc gcccgacaaa cgcacaaatg ccgtctgaaa ccttcagacg gcatttcata
    15061 cacacagccc cgccctattc gcgcatattt gcccgttcga cttctttcca cgcttcgaga
    15121 atcaggccgc cgtcgttgtc tttcaagagc gttgcatcgg aaagcatacg ccgccaagtg
    15181 cgggcatttt tcagaccgtg catcagcccg aggctgtggc ggacgatgtg gcgcaagatt
    15241 gtgccgcgtc cggcttggat ttgggcttga ctgtatgtgt agagacgctg caccaaatcg
    15301 gcgtattcaa tcgggctgcg ggtatcgccg taaaacagcc tgtcccattc gcgcatcacc
    15361 atcgggttgt ggtacgcctc gcgcccgacc atcacgccgt caacgtgttg caggtgttgc
    15421 gcgatttcct cattggtcgt gatgccgccg ttgatgatga tttccagccc gggaaactct
    15481 tgcttgaggc ggtaaacata atcgtatttc aagggcggaa cgtcgcggtt ttctttgggt
    15541 gaaagaccgt ccagccacgc gttacgtgcg tggacgataa aggttttgca ggcggttttg
    15601 tcgcgcagcg tgccgacgaa atcggcaacg gtttggtatt cggtctgcct gtccacaccg
    15661 atgcggtgtt tgacggtaac gggaatcttg accgcatcct gcatggcgtt gaggcagtcg
    15721 gcaaccagcc cgacttcgtt catcagacac gcgccgaacg cgcctttctg gacgcgcgga
    15781 ctggggcagc cgcagttgag gttgacctcg ttgtagccgt attcttcggc ggctttggcg
    15841 gctttcgcca aatcggacgg gtcgctgccg cccagttgca gggcgacggg ctgctcgcct
    15901 tcgttaaaca tcaaaaagcg gtctttgtcg ccgtaaacaa tcgcgccggc gttgaccatt
    15961 tcgctgtaca gccaagtatt gcgggtaatc tggcgcgcca tataacggta gtgcctgtcc
    16021 gtccagtcca acatcggggc gacggacagg cggcggggag gaagggtttg cgtgttgtcg
    16081 ttcattgtcg atatttcacc attgcggatt caatttcaat ccggaacaac cttcattttt
    16141 ggggaaatcc gcgtcatgaa agagtccagc agtatggtta ccggcccgtc gttgcagagc
    16201 gacacctgca tatgcgtgcg gaaacgccct gtttcgacat gaattccgtg tccgcgcaac
    16261 agttccgccg ttcgcaggta aagctgctgc gcctgttctg caggtgcggc ttgcgaaaac
    16321 gaaggccgcc gcccgcttgt cgcgtcggca taaagcgtaa actgcgacac cagcagcacc
    16381 gcgccgccga catctttcaa agacaggttc agcttgcccg cttcgtcttc aaacacgcgc
    16441 aaatgggcga ttttgtcggc gatatagcgc gcatcttttt ctgtgtcact atgcgttacg
    16501 ccgagcagca cgacgaatcc gccgtcgatt ttgccacagg tttccgtgcc gttttcggac
    16561 acgacatcca cctttgcacc taccgttttc tgtatgaccg cacgcataag ccgtcctcct
    16621 tacctgaacg tgcaatgccg tctgaaaagg cttcagacgg catcggtatt ggaaatgcca
    16681 ttacggtttg acaccgtttt cttccaaaat ggcatcgatt ttcaagcggg ctttttcctg
    16741 tctcaaacct tgttccaact ggtttctgac caactcgaaa ggctgcgcgt cggggttttt
    16801 cccgacctcg ctgagtttga acagataata gcgttcgccc aatttgaccg gatcgcgggt
    16861 aacgtcgccc cgattcatcg cggcaaactg cgaagccagc ggctcgggaa gctgctgcgc
    16921 cataatgaaa ccgtcaaaag cctgctcgtc gttcggataa cgcttcatca gcccttcaaa
    16981 agacagccct ttgagcagga gctgctgcgc ctgacgcgcc tcctcttcgg ttgcgaagct
    17041 gacctgctgc aatttgatca tgcggatttg ccgctcataa aactgacgca gtgcgctttc
    17101 ggaaaccgtt tccgaacgtt ccagaaaacg gacgtactcc tcggcataaa aagacgcttc
    17161 ggcgatttta aagcggtttt ggacatcctt atccttatcc aaaccttcct tcaatgccct
    17221 gtttttcaaa acttccaaag tttgcagccg acggacggca tcgtttcgga ttgcctgccc
    17281 gtccggtttt tgggactgct ccgcatgccg gtctgcctgc tgcatgatct gcgccaccag
    17341 cgtatccacc aaagccgggt cgatttcggg tgctttggct gccgcaaaac ctgccaacat
    17401 tgcagcaata actgcggcag cggttttttt ctgtttcatg gtattccctg tcctgcgcgg
    17461 cggcaaaacg cctgtctgaa cgtcttgccg ccatatcccg ttttcagaat tattttgcag
    17521 gtttgatgtt tgccttgccc aacagtgcac cgacggcacg gtcaatccgt tccgcctgaa
    17581 ggttgccggc aatctgtcct ttcatttcat caaaagaagg cacttttacc tcgcggctgt
    17641 cgttgacata ataaacgccg tagaaatcgc cgtttttcag cggcgttgcc gtaaattcgc
    17701 cttttttcaa gtccttaatt gcctgataaa gcggcggaac accctgttcc aaatctttca
    17761 gcggcacata tccgaccggc gcaccggtct gtttggtacg gtcgttgagg gaatattgtt
    17821 tcaagacggc atcgaaacct tttttcgcct tcaagtcggc aaccgctttt tttgcatttt
    17881 cttccttgtc ggtcaggatt tcgcccaact ggacttcctg cgtacctttg taaaaaccgc
    17941 tgatattgtc atatgcggct tttatttcct gctcggaaac cggttgggtt ttggcgatat
    18001 gcagcgcgta tgcctcgccg ttcaagccat attttaccgc ctgccaaacg gttttgaagg
    18061 acggtttctt gtcgtcgccc gactttttcg cttcggcacg caatttggca agcgcatttt
    18121 taaactctgc cgaccggtcg agtttcaggc gtttcacttc ctgtgcgacc acggtgttga
    18181 ccacttcgtt ttccagcagg gattggcgca gttgcggcgt gtcttcggca cggctgtttt
    18241 ccgcacggaa tgcggcaacc tgcgcatcga tgacggaact gtcgattttc tgaccgttga
    18301 cggttgccag cgtttgggca aacaggctgc cggaacaggc aagcagtgca acggaagtca
    18361 ggatttttgc tttcataatc ttctctcttt aaattttaaa ttgaaatgtt cgggcagact
    18421 tcattcagtc cgccgtatgg aaatactcgt caggggtagc cgcccggatg ccgagcgcgt
    18481 gaatcatgcc gcctgaaaac aaatctttga gcagcgattt gaccgttttc tggcggttca
    18541 ggcggcttac gccttcaaaa cggccgctaa cgaccaaaac ggcataatgt ccgccgccgg
    18601 tattgcccgc gtgtcctttg tgcagatggc tctcatcgcc gatttccaac accagcggat
    18661 cgagcgtctg caggcgttcg cggatcaaat cgacggccgg cattatttga acaccgcttt
    18721 aaacggcttg atcagcactt cgctgtacac gcctgcatga acatagggat cgtcttccgc
    18781 ccacgcctct gccgcatcca aagactcgaa ctgcgccaca atcaaactgc ccgaaacgcg
    18841 gttggagtcc tccggcaaag gattcgggcc tgccgtcaac agccggcctt ccgacttcag
    18901 cgtctccagc cgtttgaggt gttcgggacg tgccgccata cgcgcttcat acacattctc
    18961 cccgtctgtt gccagcaaca taaaatattc cacagtcaat cctccttttt cagacaggta
    19021 ctcagataaa taccctgaat aataaagaaa acaagcatca gtgcagtcga gccgaacatt
    19081 ttatagttga cccattgcga ctcgaaccgg gtaaacacaa accagttggc gatacccata
    19141 aaaatcagga aaccgaccca catatacgtc aatttcgccc atacggcatc cggaagctga
    19201 atctccctgc cgatactcgc cttcaagccg tttttaccgg cgaggtggct gccccacagg
    19261 aacagcgcgc ccagccaaaa caaaacgctc ggcttccaca taatgaagcg gctgtcgccc
    19321 aaaacaatgg ttgcgccgcc gaatacgaca atcagcacca gtccgaccca ctgcatcgta
    19381 tccagctttt tatatttcca atacagaaaa gccgcctgaa ccacaccggc aaccaaggca
    19441 accgccgttg cggtaatcat gtttttggta acggtataag tggcgaaaaa caggatgacg
    19501 gaaaaaaggt cgctgacaaa tttcatatcc aaatgagaaa gcaaatcaaa taaacgctaa
    19561 tcatacaggc agaaccctgt ttttgcacct gcaaaaccga caaattttat ttcggacgat
    19621 gcaaatatgc acagatgttt ttgaaaaaag atgaagatat gacataattt gtaaaattgg
    19681 ctttaaaata cagcttcggc cgggacctct gcctatccgc accctatcgt ccgtattgcc
    19741 gatgcctgat gacgaaattt acagactgta cgcggtcaaa ccgtattcag ccgccaaccc
    19801 acaggggata catcttgaaa aacaacagac aaatcaaact gattgccgcc tccgtcgcac
    19861 ttgccgcatc ctttcaggca catgcgggac tgggcggact gaatatccgg tccaaccttg
    19921 acgaaccctt ttccggcagc attaccgtaa ccggcgaaga agccaaagcc ctgctaggcg
    19981 gcggcagcgt taccgtttcc gaaaaaggcc tgaccgccaa agtccacaag ttgggcgaca
    20041 aagccgtcat tgccgtttct tccgcacagg cagtccgcga tcccgtcctg gtgttccgca
    20101 tcggtgcagg cgcgcaggta cgcgaataca ccgccatcct cgatcctgtc ggctactcgc
    20161 ccaaaaccaa atctgcactt tcagacggca agacacaccg caaaaccgct ccgacagcag
    20221 agtcccaaga aaatcaaaac gccaaagccc tccgcaaaac cgataaaaaa gacagcgcga
    20281 acgcagccgt caaaccggcg cataacggca aaacccatac cgtccgcaaa ggcgaaacgc
    20341 ttaaacagat tgccgccgcc atccgtccga aacacctgac gctcgaacag gttgccgatg
    20401 cgctgctgaa ggcaaaccca aatgtttccg cacacggcag actgcgtgcg ggcagcgtgc
    20461 ttcacattcc gaatctgaac aggatcaaag cggaacaacc caaaccgcaa acggcgaaac
    20521 ccaaagccga aaccgcatcc atgccgtccg aaccgtccaa acaggcaacg gtagagaaac
    20581 cggttgaaaa acctgaagca aaagttgccg cgcccgaagc aaaagcggaa aaaccggccg
    20641 ttcgacccga acctgtaccc gctgcaaata ctgccgcatc ggaaaccgct gccgaatccg
    20701 ccccccaaga agccgccgct tctgccatcg acacgccgac cgacgaaacc ggtaacgccg
    20761 tttccgaacc tgtcgaacag gtttctgccg aagaagaaac cgaaagcgga ctgtttgacg
    20821 gtctgttcgg cggttcgtac accttgctgc ttgccggcgg aggcgcggca ttaatcgccc
    20881 tgctgctgct tttgcgcctt gcccaatcca aacgcgcgcg ccgtaccgaa gaatccgtcc
    20941 ctgaggaaga gcctgacctt gacgacgcgg cagacgacgg catagaaatc acctttgccg
    21001 aagtcgaaac tccggcaacg cccgaacccg ctccgaaaaa cgatgtaaac gacacacttg
    21061 ccttagatgg ggaatctgaa gaagagttat cggcaaaaca aacgttcgat gtcgaaaccg
    21121 atacgccttc caaccgcatc gacttggatt tcgacagcct ggcagccgcg caaaacggca
    21181 ttttatccgg cgcacttacg caggatgaag aaacccaaaa acgcgcggat gccgattgga
    21241 acgccatcga atccacagac agcgtgtacg agcccgagac cttcaacccg tacaaccctg
    21301 tcgaaatcgt catcgacacg cccgaaccgg aatctgtcgc ccaaactgcc gaaaacaaac
    21361 cggaaaccgt cgataccgat ttctccgaca acctgccctc aaacaaccat atcggcacag
    21421 aagaaacagc ttccgcaaaa cctgcctcac cctccggact ggcaggcttc ctgaaggctt
    21481 cctcgcccga aaccatcttg gaaaaaacag ttgccgaagt ccaaacaccg gaagagttgc
    21541 acgatttcct gaaagtgtac gaaaccgatg ccgcagacga tttgtccgca ttgcttcaac
    21601 ctgccgaagc actgtccgtt gaggaaaata taacggaaac cgttgccgaa acacccga
//
LOCUS       DBBZXU010000024        21298 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.024, whole genome shotgun sequence.
ACCESSION   DBBZXU010000024 DBBZXU010000000
VERSION     DBBZXU010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 21298)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21298)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21298
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.024"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(68..814)
                     /locus_tag="ACJJDE_000778"
     CDS             complement(68..814)
                     /locus_tag="ACJJDE_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HGG7540735.1"
                     /translation="MDFRFDIIYEYRWMFLYGALTTLGLTVVATAGGSVLGLLLALAR
                     LIHLEKAGAPMRVLAWALRKVSLLYVTLFRGTPLFVQIVIWAYVWFPFFVHPSDGILV
                     SGEAAIALRRGYGPLIAGSLALIANSGAYICEIFRAGIQSIDKGQMEAARSLGLTYPQ
                     AMRYVILPQALRRMLPPLASEFITLLKDSSLLSVIAVAELAYVQNTITGRYSVYEEPL
                     YTVALIYLLMTTFLGWIFLRLEKRYNPQHR"
     gene            complement(798..977)
                     /locus_tag="ACJJDE_000779"
     CDS             complement(798..977)
                     /locus_tag="ACJJDE_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540736.1"
                     /translation="MNGKCRLKTARPAFLRRRATAVCRDKKVQAAVFTVKWRIILQRR
                     QFRRFLIRTVYGFSF"
     gene            complement(993..1664)
                     /locus_tag="ACJJDE_000780"
     CDS             complement(993..1664)
                     /locus_tag="ACJJDE_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HGG7540737.1"
                     /translation="MQIKKIMKWLPVALSLLGALGYTGYGSEAVRTAVAVLDVLGAAG
                     DAGSDAPARRRASAKSGHRYTGTVSKVYDGDTLHVIDGDGAKHKIRMAYIDAPEMKQA
                     YGTRSRDNLRAAAEGRKVSVRVFDTDRYQREVAQVSVGKTDLNLMQVQDGAAWHYKSY
                     AKEQQDKADFADYADAQIQAERERKGLWKAKNPQAPWAYRRAGRSGGGNKDWMDAVGE
                     WLGIW"
     gene            complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACJJDE_000781"
     CDS             complement(1733..2404)
                     /gene="rpiA"
                     /locus_tag="ACJJDE_000781"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HGG7540738.1"
                     /translation="MTTQDELKRIAAEKAVEFVPENEYIGIGTGSTINFFIEALGKSG
                     KKIKGAVSTSKKSSELLAQYDIPVVSLNEVSGLAVYIDGADEVNHALQMIKGGGGAHL
                     NEKIVASASEKFVCIADESKYVSRLGKFPLPVEVVESARSLVSRKLLAMGGQPELRIG
                     YTTFYGNQIVDVHGLNIDQPLTMEDEINKITGVLENGIFARDAADVLILGTEEGAKVI
                     YPCQG"
     gene            complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACJJDE_000782"
     CDS             complement(2481..2963)
                     /gene="ispF"
                     /locus_tag="ACJJDE_000782"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HGG7540739.1"
                     /translation="MTNIRIGQGYDVHQLTEGRKLILGGVEIPFEKGLLGHSDADALL
                     HAVTDALLGAAGLGDIGSHFPDTAAEFKDADSRVLLRAAYQSVQAQGWQAVNVDTTVI
                     AQKPKLAPHIPQMRANIAADLGIDISCVNIKGKTNEKLGYLGRMEGIEAQAAVLLVRI
                     "
     gene            complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACJJDE_000783"
     CDS             complement(2995..3684)
                     /gene="ispD"
                     /locus_tag="ACJJDE_000783"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HGG7540740.1"
                     /translation="MKRKNIALIPAAGIGARFGADKPKQYVEIGSKTVLEHTIGIFER
                     HEAVDLTVVVVSPEDTFADKVQTAFPQVRVWKNGGQTRAETVRNGVAKLLEIGLASAD
                     DNILVHDAARCCLPSEALTRLIEQAGNAAEGGILAISIADTLKRAEGGQISATVERTS
                     LWQAQTPQLFRAGLLHRALAAENLDGITDEASAVEKLGIRPLLVQGDARNLKLTQPQD
                     AYIVRLLLNAV"
     gene            complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACJJDE_000784"
     CDS             complement(3681..4415)
                     /gene="dnaQ"
                     /locus_tag="ACJJDE_000784"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HGG7540741.1"
                     /translation="MTTRQIILDTETTGLYADGGDRLVEFAGLEMVNRQMTDKNLHLY
                     VHPERDMPEEAARVHGLTIQVLEGKNAPPFAEVGRQIADFLRGAELIIHNAKFDVGFL
                     NMEFRRMGLPTVEELGCTVTDTLAMAREMFPGQKASLDALCNRFSVDRSKRVLHGALI
                     DCELLGEVYLAMTRRQFDLMGAAAEEKMETKPVVHTETKRSGKLKVIRADENELAAHG
                     QYLDGLGEACIWRKEAVPSENGGTDA"
     gene            complement(4571..5881)
                     /locus_tag="ACJJDE_000785"
     CDS             complement(4571..5881)
                     /locus_tag="ACJJDE_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7540742.1"
                     /translation="MYAKKGGLGLVKSRRFAPLFATQFLGAFNDNVFKTALFVMIGFY
                     GLGQNGFLPAGQMLNLGALLFILPYFLFSSLSGQLGNKFDKAVLARWVKVLEMIIMAV
                     AAYGFYIRSAPLLLACLFCMGAQSTLFGPLKYAILPDYLDDKELMMGNSLIESGTFVA
                     ILFGQILGTAVAGVPPYIVGILVLLVAVGGTVGSLFMPSVPAKAADTQIEWNIVRGTK
                     SLLRETVRYKPVFTAIIGISWFWFVGAVYTTQLPTFTQIHLGGNDNVFNLMLALFSIG
                     IAAGSVLCAKFSRERLMLAWVTVGALGLTVCGLVLVWLTHGHRFEGLNGIFWFLSQGW
                     AYPVMAVMTLIGFFGGFFSVPLYTWLQTASSETFRARAVAANNIVNGIFMVSAAVLSA
                     VLLFLFDSISLLYLIVALGNIPLSVFLIKRERRFLGAAAIRKKP"
     gene            complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACJJDE_000786"
     CDS             complement(5871..6056)
                     /gene="ccoS"
                     /locus_tag="ACJJDE_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome oxidase assembly protein
                     CcoS"
                     /protein_id="HGG7540743.1"
                     /translation="MESMFILVPISIILAFVIGWFFWWSGKNGQFDDLEGPAHRILMD
                     DDSTSKLIEKERENDVR"
     gene            complement(6056..6355)
                     /locus_tag="ACJJDE_000787"
     CDS             complement(6056..6355)
                     /locus_tag="ACJJDE_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540744.1"
                     /translation="MHYFSIHDQSGRHIGFFILLADDESEARPQSGRFAVKLEGGMEN
                     HVLSPFGQTEIPQYWRVVKDRIELFFDEAPVGTLRNEYLTVSGQTFVLNDLTGNM"
     gene            6706..7902
                     /locus_tag="ACJJDE_000788"
     CDS             6706..7902
                     /locus_tag="ACJJDE_000788"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006085 - acetyl-CoA biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HGG7540745.1"
                     /translation="MSQKLILVLNCGSSSLKGAVLDNGSGEVLLSCLAEKLNLPDAYI
                     TFKVNGEKHKVDLSAHPDHTGAVEALMEELKAHGLDSRIGAIGHRVVSGGELYSESIL
                     VDDEVIAGIEKCIPLAPLHNPAHLLGLRAAQSIFKGLPNVVVFDTSFHQTMPEVAYKY
                     AVPQELYEKYGLRRYGAHGTSYRFVADETARFLGKDKKDLRMVIAHLGNGASITAVAN
                     GESRDTSMGLTPLEGLVMGTRSGDIDPSVFGFLAENANMTIAQITEMLNKKSGLLGIS
                     GLSNDCRTIEEEAAKGHKGAKLALDMFIYRLAKYIGSMAVAAGGLDALVFTGGIGENS
                     DIIRERVIGYLGFLGLNIDQEANLKARFGNAGVITTAGSKAVAVVIPTNEELMIAHDT
                     ARLSGL"
     gene            complement(8538..10379)
                     /locus_tag="ACJJDE_000789"
     CDS             complement(8538..10379)
                     /locus_tag="ACJJDE_000789"
                     /EC_number="1.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0047134 - protein-disulfide reductase
                     (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HGG7540746.1"
                     /translation="MQTNYLSETDSIMKKLICLFAVFLMLCGRAFALDANDLLPPEKA
                     FVPELAVADDGVNVRFKIADGYYMYQAKIVGKTDPADLLGQPSFSKGEEKEDEFFGRQ
                     TVYHHEAQVAFPYAKAVGEPYKLVLTYQGCAEAGVCYPPVDTEFDISGNGTYHPQTDE
                     PASAKDRFLQPSSQNGSGALPPPKGDEGGDSRFKLSWDTLNANLLAFFLAGLGLSFTA
                     CMYPLLPIVSSIVVGDKKAGKARAFVLSVVYVQGLALTYTLVGIVAGLTGALLTVWLQ
                     QAWVVLAASALMVVLALSMFGLFNIQLPNAVQSYFQNQSSRLSGGKIVSVFIMGILSA
                     LIVGPCVAPPLAFALGYIGQTGDAVLGGLALYTLALGTGVPLIAIGTFGGHILPKAGD
                     WMNAVKYAFGFILLAVAVYLATPHLPYYLVVALYTLLMLVPACMLLVNGRRQKRRPKA
                     VAFALGSILLIGGAWFGWQGANGKTTALHHFLTLNPPAEAGKSSEHGKMFADTAALKA
                     AMDTALKEHPDKPVVLDFYADWCISCKEMAAYTLNQPEVHQAVDMERFFQIDVTANTP
                     EHQALLKEYGLFGPPGVFVVRSDGSRSEPLLGFVKADKFIEWYEQNR"
     gene            10470..10940
                     /locus_tag="ACJJDE_000790"
     CDS             10470..10940
                     /locus_tag="ACJJDE_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1841 family protein"
                     /protein_id="HGG7540747.1"
                     /translation="MYDVNTHDVRRFFARVWQQRLNPLQLSALEQKALRIVEAHPEYH
                     RYLERIEDHLDTDWLPENGESNPFLHMSLHLSVQEQAGIDQPHGIRAIHDTLCAKRGW
                     LEAEHEMMEALAETLWTAQRYGTGLDVNFYMTRLRKLIGLGAEDQARLNPHEIA"
     gene            complement(11011..11823)
                     /gene="hpnC"
                     /locus_tag="ACJJDE_000791"
     CDS             complement(11011..11823)
                     /gene="hpnC"
                     /locus_tag="ACJJDE_000791"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HGG7540748.1"
                     /translation="MSVGHYENFPVGSLILPRRLRKPVHAVYAFARTADDMADEGSMP
                     SEARLAGLEGLRRELDVLASGGRSAHPLIARLDAEAVVPFGLDLQPFYDLLSAFSQDV
                     VKTRYGNFGELADYCRRSANPVGRIMLALYGKTDAVCVAQSDGICTALQLVNFWQDVA
                     VDWQKGRVYIPQDDLLKFGVSEGQIAEGRADAAFQRLMAYECRRAFRMLKAGSPLARE
                     LKGRIGLELRMIVLGAQLILQKLDACRYDVFAQRPVLDKKDWLIMLKRALWK"
     gene            complement(11910..12392)
                     /locus_tag="ACJJDE_000792"
     CDS             complement(11910..12392)
                     /locus_tag="ACJJDE_000792"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7540749.1"
                     /translation="MAIVKNSVVSLHYEMYDANNQLLDKTEEPIAYLHGGYDGIFPLV
                     EEALHGKDAGDTVDVALSPDDAFGEQDPELVRIEDAGVFPVEVEVGMMFEADDPETGD
                     VVVYRVTDVADGKAVVDGNHPLAGMKIRFKATVESVRDASDEEIAHGHVHGPHGHHHH
                     "
     gene            12866..13147
                     /locus_tag="ACJJDE_000793"
     CDS             12866..13147
                     /locus_tag="ACJJDE_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540750.1"
                     /translation="MKKSLFAAALLSLVLAACGGEKAAEAPATEAPAAEAPATEAPAA
                     EAPATEAPAAEAPAAEAAATEAPAAEAPAAEAAATEAPAAEAPAAEAAK"
     gene            13257..14624
                     /locus_tag="ACJJDE_000794"
     CDS             13257..14624
                     /locus_tag="ACJJDE_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HGG7540751.1"
                     /translation="MPDLHTEFSRLLPADEIAELSPTLLKDQRNRFTSAPDIILQPRS
                     VESVQTIMRFCYEHRIPVTPQGGNTGLCGAAVSENGVLLNLSKLNRIRSINLSDNCIT
                     VEAGSVLQTVQQAAEASNRLFPLSLASEGSCQIGGNIACNAGGLNVLRYGTMRDLIIG
                     LEVVLPNGELVSHLHPLHKNTTGYDLRHLFIGSEGTLGIITAATLKLFARPSDKATAW
                     VGIPDIESAVRLLTETQAHFAERLCSFELVGRFAAELSSEFSKFPLPTHSEWHILLEL
                     TDSLPDSNLDDRLVEFLYKKGFTDSVLAQSEQERIHMWALRENISASQRKLGTSIKHD
                     IAIPIGRVADFVRRCAKDLEQNFKGIQIVCFGHLGDGSLHYNTFLPEILSNEVYRYEN
                     DINDAVYRNVLACNGTIAAEHGIGIIKKQWLDKVRTPAEIALMKSIKQHLDPYNIMNP
                     GKLLP"
     gene            complement(14805..16847)
                     /locus_tag="ACJJDE_000795"
     CDS             complement(14805..16847)
                     /locus_tag="ACJJDE_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_180374913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HGG7540752.1"
                     /translation="MYYETRSKQASKQKFKKSFIISLFFSILYTSPLLAVDYVYDNSK
                     LTNEQIDRLKKLRDKSSEYWKQETYLLKPTNGSSQNSLKVPALYSKTHQFKNINNSKK
                     ISFYDKEYTEDYLVGFARGFGVEKRNGEEEKTLQQYFKDCVNTGNSNNDKCEQPSFEN
                     SGPRLIKSDIFALAPQIKNSHINSEILSVGNYIEWLRPTLNKLPSWQEHLYSGLDPFH
                     YIEVTDNSHVIGQTISLDEFRLENSLWEPRWDSDVGELKTTNADIRFNTKSESLLVKE
                     DYAGGARFRFAYDLKDKVSETPVLTFEKNITGTSDIIFENPIDDLKSLDGHQIIKVNG
                     TADKHAFRLSGKHQKGIYTLSLQQRPEGFFTKVQERDDISIYAQQAQAANTLFALRLN
                     DKNSDIFDRTLPRKGLWLRVIDGHSNQWVQGKTAPVEGYRKGVQLGGEVFTWQNESNQ
                     LSVGLMSGQAEQRSTFRNPDTDNLTTGNVKGFGAGIYATWHQLQDKQTGAYADSWVQY
                     QRFRHRINTEDATERFTSKGITASIEAGYNALLAEHFTKKGNSLRVYLQPQAQLTYLG
                     VNGKFSDSENAHVNLLGSRQLQTRVGVQAKAQFSLYKNIAIEPFAAVNALYHNKPFGV
                     EIDGERRVINNKTAIESQLGVAVKIKSHLTLQASFNRQTSKYHQAKQGALNLQWTF"
     gene            complement(17213..17659)
                     /gene="smpB"
                     /locus_tag="ACJJDE_000796"
     CDS             complement(17213..17659)
                     /gene="smpB"
                     /locus_tag="ACJJDE_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HGG7540753.1"
                     /translation="MAIANNKKAFHDFFIEDRIEAGLVLEGWEVKAIRAARVQLKESY
                     IYWKKDAFYLVGCHITALPTASTHIKPDAVRPRKLLLNQSEINKLIGKTERAGYTIVP
                     LDLHFSRGKIKMEIGLAKGKKQHDKRQSMKEADWKREKQRLIKHTR"
     gene            complement(17714..18724)
                     /gene="waaF"
                     /locus_tag="ACJJDE_000797"
     CDS             complement(17714..18724)
                     /gene="waaF"
                     /locus_tag="ACJJDE_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HGG7540754.1"
                     /translation="MSIKILIISPSWIGDCVMTQPLFRRLKELHPGCTIDVFAPKWSM
                     AVFERMPEVNEILENPFGHGALELKRRWRVGRDLGRRGYDQVIVLPGSLKSAVIALAT
                     GIAKRTGYVGESRYFLLNDIRRLDKERLPLMVDRYTALAHPSQEDFDGHSGFPEFSID
                     ERRREISVETFGLNLGKPVLAFCPGAEFGPAKRWPTRHFAELGKHYLAAGWQVWLFGS
                     QKDDEIAEEINCLSDGMCVNLCGKTDLSQAMDLLSLADTVVCNDSGLMHLAAALGRKV
                     VAVYGSSSPTHTPPLSDKAKIVSLHLECSPCFKRECPLGHTDCLNKLYPEKIVQAVEE
                     AV"
     gene            complement(18855..18930)
                     /locus_tag="ACJJDE_000798"
     tRNA            complement(18855..18930)
                     /locus_tag="ACJJDE_000798"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18895..18897),aa:Asn,seq:gtt)
     gene            complement(19121..19873)
                     /locus_tag="ACJJDE_000799"
     CDS             complement(19121..19873)
                     /locus_tag="ACJJDE_000799"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HGG7540755.1"
                     /translation="MITLPSLNNLPSKWDEIRHCLETRVFECGVMPHPNLTECEAGQF
                     DRDFWDNIGCAPEEYVRIRRAIRLLEVRYPDSLNELVCAAIATPLGEMLAVFGNKGLC
                     LLEFVGQKHLEQEIAAVQKALRGRFVFREDERTQLLRQELDLYFKGRLKTFATPLEQI
                     GTEFQKQAWDALLAIPYGETRSYKEQAQRLGNPNAVRAVAAANGQNKVSILIPCHRVI
                     GSDGKLTGYAGGLNRKQFLLALERGEVQTALF"
     gene            20184..20531
                     /locus_tag="ACJJDE_000800"
                     /pseudo
     CDS             20184..20531
                     /locus_tag="ACJJDE_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255955.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
     gene            complement(20520..21118)
                     /locus_tag="ACJJDE_000801"
                     /pseudo
     CDS             complement(20520..21118)
                     /locus_tag="ACJJDE_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751227.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
BASE COUNT         5283 a         6097 c         4897 g         5021 t
ORIGIN      
        1 ataaatttgc cacaaaaaag ctgcctcaaa tgaatacccg ggcagctttt tgttgatatg
       61 actccaatca gcggtgttgc ggattgtaac gtttttccaa acgcaggaat atccagccta
      121 agaaagtcgt catcaacaga taaatcaggg cgacggtgta aagcggttct tcataaaccg
      181 aataccggcc cgtaatcgta ttctgaacat acgccaactc cgccacagca atgaccgaca
      241 gcagcgagct gtctttcaag agcgtgatga actcgctcgc caaaggcggc agcatgcggc
      301 gcaatgcctg cggcagaatc acatagcgca tcgcctgcgg ataggtcagc cccaaagaac
      361 gcgccgcctc catctgtcct ttgtctatag actggatgcc cgcgcggaaa atctcacaga
      421 tatacgcccc cgagttggcg atcagtgcca aagaaccggc aatcagcggc ccgtatccgc
      481 gacgcagcgc gattgccgcc tcgccgctga ccaaaatgcc gtctgaagga tggacgaaaa
      541 acggaaacca cacatacgcc caaatcacaa tctgcacaaa cagcggcgta ccccggaaca
      601 gcgtaacata cagcagcgaa actttacgca acgcccacgc cagcacgcgc atcggcgcac
      661 cggctttttc caagtgaatc aggcgcgcca acgccaacaa cagacccaat accgaaccgc
      721 ccgccgtcgc cacgaccgtc agccccaagg tcgtcagtgc gccgtaaagg aacatccagc
      781 ggtattcgta aataatgtca aaacgaaaat ccatataccg tccgtatcaa aaaccggcgg
      841 aactgccgcc gttgcaaaat aatccgccat tttaccgtaa aaaccgccgc ctgaactttt
      901 ttatcgcggc agacggcggt tgcgcgtctc cgcaaaaatg cagggcgcgc ggttttcaga
      961 cggcatttgc cgttcaaagc cgtgcgctgt ctttaccaaa tgcccaacca ttcgcccacg
     1021 gcatccatcc aatccttatt gcccccgccg ctcctgcctg cccggcggta cgcccacggc
     1081 gcttgcggat ttttagcttt ccacaatcct ttgcgttccc tttccgcctg aatttgagcg
     1141 tcggcataat cggcaaaatc cgccttatcc tgctgttctt tagcataact tttataatgc
     1201 cacgccgccc cgtcctgcac ctgcatcagg ttcaaatcgg ttttgccgac agaaacctgc
     1261 gccacttcgc gctggtagcg gtcggtgtcg aacacgcgca cgctgacttt cctgccttcc
     1321 gccgccgcac gcaggttgtc gcgcgaacgc gtgccgtaag cctgtttcat ctccggcgcg
     1381 tcgatatacg ccatccggat tttgtgtttc gcgccgtcgc cgtcgataac gtgaagggtg
     1441 tcgccgtcat agactttgga caccgtgcct gtgtagcggt ggccggattt cgccgatgct
     1501 cggcggcggg cgggcgcgtc ggaacccgcg tcccctgccg cgccgagtac gtcgagtacg
     1561 gcaaccgccg tccgcaccgc ctcgctgccg taccccgtat aacccaacgc acccaaaagc
     1621 gacaaggcga cgggaagcca tttcatgatt tttttaatct gcatattttt caaatgccga
     1681 tgccgtctga acatatcgga atcggatttc agacggcatc ttaacgtcag gattaccctt
     1741 ggcagggata gatgactttc gcaccctctt ccgtccccaa aatcaacaca tcggcggcat
     1801 cgcgggcgaa tatgccgttt tcgagcacgc cggtgatttt gttgatttcg tcttccatcg
     1861 tcagcggctg atcgatattc aagccgtgga catcgacgat ttggttgccg taaaacgtgg
     1921 tgtagccgat acgcagttcg ggctgtccgc ccatagcgag cagtttgcgc gaaacaagag
     1981 agcgcgcgct ttcgacgact tccacaggca gagggaattt gcccaaacgt gaaacatatt
     2041 tgctttcatc cgcaatgcag acgaattttt cggatgcgct ggcgacgatt ttttcgttga
     2101 ggtgtgcgcc gccgccgcct ttaatcattt gcagggcgtg gttcacttca tccgcaccgt
     2161 caatatagac cgccaacccc gatacttcgt tcagggaaac gacgggaata tcatattggg
     2221 caagcagttc actggatttt ttggaagtag ataccgcgcc tttgattttt ttgccgctct
     2281 tacccaaggc ttcgatgaaa aagttgatgg tcgaaccggt accgatgccg atgtattcgt
     2341 tttcgggtac gaattcgact gctttttcgg cggcgatgcg cttgagttcg tcttgtgtcg
     2401 tcatattttt gtcctttggg aaaccgtatc aacaaacagc cgccatctta acattttttt
     2461 gcacgtcctg cccgccgcgt tcaaatcctt accagcaata ccgccgcctg cgcctctatg
     2521 ccttccatgc gcccgagata accgagtttt tcgttggttt tgcctttgat gttgacgcac
     2581 gaaatgtcta tgcccaaatc ggcggcgatg ttggcacgca tttgcggaat atgcggcgcg
     2641 agtttgggtt tctgtgcaat cacggtcgta tcgacattga ccgcctgcca accctgcgcc
     2701 tgaacgcttt gatacgccgc acgcaaaagg acgcggctgt ccgcatcttt gaactctgcg
     2761 gcggtgtcgg ggaaatggct gccgatatcg cccaaacctg ccgcaccgag cagcgcgtcg
     2821 gtaacagcgt gcagcagcgc atcggcatcg gagtgtccga gcagcccttt ttcaaatggg
     2881 atttcaactc cgccaagtat cagctttctg ccttcggtca gttggtggac atcgtagccc
     2941 tgtccgatac ggatgttcgt catcgtttgt gttcctgatg ttttgaattg aagttcagac
     3001 ggcattgagc agcagcctga cgatgtatgc gtcctgcggc tgcgtcagtt tcaaattgcg
     3061 cgcgtcgccc tgcaccagca aagggcggat gcccaatttt tccacggcgg acgcttcatc
     3121 ggtaatgccg tccaagtttt ccgcagccaa tgcgcggtgc agcagccccg cgcggaaaag
     3181 ctgcggcgtt tgtgcctgcc aaaggctcgt ccgctcgaca gtggcactga tttgtccgcc
     3241 ttctgcgcgt ttgagcgtat cggcaatgga aattgccaaa atcccgcctt cggcggcgtt
     3301 gcccgcctgt tctatcaacc gcgtcaaagc ttcagacggc aggcagcagc gcgcggcatc
     3361 gtgtaccaga atattgtcat ccgccgatgc caagccgatt tccaacagtt ttgccacacc
     3421 gtttcggacg gtttcggcgc gggtctgtcc gccgtttttc cacacccgaa cctgtggaaa
     3481 tgccgtctga accttatcgg caaacgtgtc ttcgggcgag acgacaacga cggtcaaatc
     3541 gacggcctca tgccgttcaa aaatcccaat cgtatgttct aaaacggttt tgcttccgat
     3601 ttcgacatat tgcttgggtt tgtccgcacc gaaacgcgcc ccgatgccgg cggcgggaat
     3661 cagcgcgata tttttgcgct tcatgcgtcc gtcccgccgt tttcagacgg cacggcttcc
     3721 ttgcgccaga tacaggcttc gcccaagccg tccaaatatt gcccgtgcgc cgccaactcg
     3781 ttttcgtccg ccctgatgac tttcagttta ccgctgcgtt tggtttcggt atgcaccacg
     3841 ggtttggttt ccattttttc ctctgcggcc gcacccatca ggtcgaactg ccgccgcgtc
     3901 atagcaagat agacttcgcc caaaagttcg cagtcgatca atgcgccgtg caggacgcgc
     3961 ttgctgcggt cgacggaaaa acggttgcac aaggcatcca ggctggcttt ctgcccgggg
     4021 aacatttcgc gcgccatcgc cagggtatcg gtaacggtac agccgagttc ctcaacggtc
     4081 ggcaacccca tccggcggaa ctccatattg aggaagccca cgtcgaattt ggcattgtgg
     4141 ataatcagtt ccgcaccgcg caggaaatcg gcaatctgcc tgccgacctc tgcaaacggc
     4201 ggcgcgtttt tcccttccaa aacctgtatc gtcaagccgt ggacgcgtgc cgcctcttcg
     4261 ggcatatcgc gctcggggtg gacatagagg tgcaggtttt tgtcggtcat ttggcggttg
     4321 accatttcca aaccggcaaa ctcgaccaag cggtcgccgc cgtcggcata cagaccggtg
     4381 gtttcggtat cgaggatgat ttggcgtgtc gtcatatcgg tgtctttctt ctatcttcgt
     4441 aaattgctta ttttttaagc aatgtatttt tctgttttca tttcaatgca caaacccact
     4501 tattcacagt gtgttcacaa cattgggcag gcggattgtg tattttgggg acaatttttt
     4561 cagacggcat tcaaggtttt ttcctgattg ccgccgcgcc taaaaaccgc ctttcgcgct
     4621 taatcaaaaa taccgacaac ggaatattgc ccaaagcgac aatcagatac aacaaggaaa
     4681 tgctgtcaaa caaaaacagc aacaccgcgc tcaaaacggc ggcggaaacc ataaaaatac
     4741 cgttaacgat attgttggcg gcaacggcgc gggcgcggaa agtctcgcta ctggcggttt
     4801 gcagccaggt atagagcgga acggagaaaa atccgccgaa aaagccgatc agcgtcatca
     4861 ccgccatcac gggatatgcc catccttgcg ataaaaacca aaaaatgccg ttcagccctt
     4921 caaaacggtg tccgtgcgtc agccacacca aaaccaggcc gcaaaccgtc aaacccaacg
     4981 caccaaccgt tacccaagcc aacatcaggc gttccctgct gaacttggca cacagtaccg
     5041 aaccggcggc aataccgatg gaaaacaggg caagcatcag gttgaaaaca ttgtcgttgc
     5101 cgcccagatg gatttgggta aaggtcggca gttgcgtggt ataaaccgcg ccgacaaacc
     5161 aaaaccacga aataccgata atagcggtaa agacgggttt gtaccgcacc gtttcacgaa
     5221 gcagggattt tgtgccacgg acaatattcc actcaatttg ggtatcggca gccttggcgg
     5281 ggacggacgg cataaacagg ctgccgaccg tgcctccgac ggcgaccagc aaaaccagta
     5341 tcccgacaat ataaggcggt acacctgcca ccgccgttcc caaaatctga ccgaacagga
     5401 tggcgacaaa cgtacccgat tcaatcaggc tgttgcccat catcaactct ttgtcgtcga
     5461 gataatcggg caggatggcg tatttcagcg gcccgaacag cgtcgattgc gcgcccatgc
     5521 aaaacagaca cgccaaaagc agcggggcag accggatata aaacccgtat gccgccaccg
     5581 ccataatgat catttccagc accttgaccc aacgcgccaa aacggccttg tcgaatttgt
     5641 tacccaactg ccccgacagc gaggaaaaca ggaaatacgg caaaataaac aacaacgcgc
     5701 ccaagttcaa catctgtccg gcaggcagga agccgttttg ccccaaaccg taaaacccaa
     5761 tcatcacaaa cagcgcggtt ttgaacacat tgtcgttgaa cgcgccgaga aactgcgtag
     5821 cgaaaagagg tgcgaaacgg cggcttttaa ccagtcccaa accgcctttt ttagcgtaca
     5881 tcgttttccc tctctttttc aatcagttta cttgtcgaat catcatccat caggatgcgg
     5941 tgcgccggcc cttccaagtc gtcaaactgc ccgtttttgc ccgaccacca aaaaaaccag
     6001 ccgatgacaa acgccaaaat aatgctgatg ggcaccaata taaacatgct ttccatcaca
     6061 tattccctgt caaatcgttc aaaacaaaag tctgccccga cacggtcaga tattcgttac
     6121 gcaaagttcc gacgggagct tcgtcaaaaa acagctcgat acggtctttg accacgcgcc
     6181 aatattgggg gatttccgtc tgaccgaacg gcgacaggac atgattttcc attccgcctt
     6241 caagtttgac ggcaaaacgc ccgctttgcg gccgtgcttc cgattcgtcg tcggcaagca
     6301 ggatgaaaaa gcctatatgc cgtcccgatt ggtcatgaat actgaaataa tgcataaatt
     6361 tcccacccgc cttttttcag acgacaccaa ctaaaaacag ggcgaatgta ccagtttgga
     6421 cgggaagaat gcaaagaaat tctccctccc ccagccgaaa acaccggcaa accgcatatc
     6481 cccctttttt ccgtcaaaat gcccgacttc cgccattttc acgcaaacgc ccgattaagc
     6541 caagcaattg caaagatttt ttgctagaat agcctgcttc ttttatcaac cttttcagac
     6601 ggccccacta ctttcccgcc caggaaggca aaacggattc ggcacgaatc cggttagtat
     6661 ccgtgtccga ttccaatgcc gtctgaaact ttccggagta agaaaatgtc ccaaaaattg
     6721 atcttggttt tgaactgcgg cagctcgtcc ctcaaaggcg cggtcctgga taacggcagc
     6781 ggcgaagtcc tgctcagctg ccttgccgaa aaactcaacc tgcccgatgc ctacatcaca
     6841 ttcaaagtaa acggcgaaaa acacaaagtc gatctgtccg cacatcccga ccacaccggc
     6901 gcggtcgaag ccctgatgga agaactcaaa gcccacggcc tcgacagccg catcggcgcc
     6961 atcggccacc gcgtcgtcag cggcggcgaa ctgtacagcg aatccatcct cgttgacgac
     7021 gaagtcattg ccggcatcga aaaatgcatc ccgctcgccc ccctgcacaa ccccgcccac
     7081 ctcttgggcc tgcgtgccgc gcaaagcatt ttcaaaggcc tgcccaacgt cgtcgtattc
     7141 gatacctcct tccaccaaac catgcccgaa gtcgcctaca aatacgccgt tccgcaggag
     7201 ttgtatgaaa aatacggcct gcgccgttac ggcgcgcacg gtaccagcta ccgcttcgtc
     7261 gccgacgaaa ccgcgcgctt cctcggcaaa gacaaaaaag acctgcgtat ggtcattgcc
     7321 cacttgggca acggcgcgtc catcaccgcc gtcgccaacg gcgaatcgcg cgacaccagt
     7381 atgggcctga ccccgctgga agggctggta atgggtacgc gcagcggcga catcgatcct
     7441 tccgtattcg gcttcctcgc cgaaaacgcc aatatgacca tcgcccaaat cactgaaatg
     7501 ctgaataaaa aatccggtct gctcggcatt tccggcctgt ccaacgactg ccgcaccatt
     7561 gaagaagaag ccgccaaggg gcataaaggc gcgaaattgg ccttggatat gtttatctac
     7621 cgccttgcca aatacatcgg cagtatggcg gttgccgcag gcggtttgga cgcactggtc
     7681 tttaccggcg gcatcggcga aaactccgac atcatccgcg aacgcgtgat cggctacttg
     7741 ggcttcctcg gtctgaacat cgaccaagaa gccaacctga aggcacgctt tggcaacgcc
     7801 ggcgtgatta ccactgccgg cagcaaagcc gttgccgtgg tcattccgac caacgaggaa
     7861 ttgatgattg cacacgatac cgcccgcttg agcggtctgt aagattcaat ccccacgcga
     7921 actgcctccg aaaacggagg cagttttttt atccggcttt ccatgcttaa acagcaccgc
     7981 ctcttttcag acgttgacgg ttgcagccgc ttacctgaac cttatagtgg attaacaaaa
     8041 accagtacag cgttgcctcg ccttagctca aagagaacga ttctctaagg tgctcaagca
     8101 ccaagtaaat cggttccgta ctatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt
     8161 tttgttaatc cactatatcc gactttccat acttaaacag cactgcctct tttcagacat
     8221 tgacggttgc agccgcccac ctgaacctta atgattgact attttttaat catgttatta
     8281 ttttccataa aatacatgac attaagatgt ttttccacaa aagatacaca caccggcaaa
     8341 caccggctgt gtttatcttt tcttatgcct attttttaat catcgtattt ttatctttta
     8401 atttcaatac gcaaactaac ttatacacac ggttttcaca tctttggact gcttccgtgt
     8461 gtatagcgga tattgccgtt ttcctttctg acaaaaatgc cgtctgagaa cttcagacgg
     8521 catttgaaac atcggaatca gcggttttgt tcataccact cgataaactt gtctgctttg
     8581 acaaaaccca gcagcggctc gctgcggctg ccgtcggagc ggacgacaaa cacgcccggc
     8641 ggcccgaaca gaccgtattc tttcaacaac gcctgatgtt cgggcgtgtt ggcggttacg
     8701 tcgatttgga aaaagcgttc catatcgact gcctgatgca cttccggctg attgagcgtg
     8761 taagccgcca tttctttgca ggaaatgcac cagtcggcat aaaaatccaa aacgacgggt
     8821 ttgtcgggat gttctttcaa cgccgtatcc atcgctgcct tcagcgcggc agtatcggca
     8881 aacattttgc cgtgttccga agatttgcct gcttcggccg gcggattgag ggtcaggaaa
     8941 tggtgcagcg cggtcgtttt gccgtttgcg ccctgccagc cgaaccacgc gccgcctatc
     9001 agcaatatgc tgcccaatgc gaatgccaca gctttcggac ggcgtttctg cctgcgtccg
     9061 ttgaccagca gcatacaggc aggaaccagc atcagcagcg tgtacagcgc gacgacgaga
     9121 taatagggca agtgcggcgt ggcgaggtaa acggcgacgg caagcaggat aaagccgaaa
     9181 gcgtatttga cggcattcat ccaatcgcct gccttaggca ggatatgccc gccgaacgtg
     9241 ccgatggcaa tcagcggaac gccggtgccc aacgccaaag tgtaaagtgc caaaccgcct
     9301 aaaaccgcat cgcccgtctg accgatgtag cccaaagcaa atgccagcgg cggggcgacg
     9361 cacggcccga caatcagcgc ggacaatatg cccataataa agacggaaac gattttaccg
     9421 cctgaaagcc tgctgctttg attctgaaaa tacgactgca cggcgttggg aagctggatg
     9481 ttgaacagcc cgaacataga cagtgccaag acgaccatca aagccgatgc cgccaacacg
     9541 acccaagcct gctgcaacca tacggtcagc agtgcgcccg tcagtccggc aacaatgccg
     9601 accagcgtat aagtcagagc caaaccctga acataaacga cggacagcac aaacgcccgc
     9661 gccttgcccg cctttttgtc gccgaccaca atactggaaa caatcggcaa caggggatac
     9721 atacaggcgg taaaactcag acccaaaccg gcgagaaaaa acgccaaaag attggcgttg
     9781 agcgtatccc aagacagctt gaaacggctg tcgccgccct catccccctt cgggggcggc
     9841 agcgccccgc tgccgttttg agaggaaggc tgcaaaaagc ggtctttggc ggatgccggt
     9901 tcgtcggttt gcggatggta agtgccgttg ccggaaatat caaactcggt atccacgggc
     9961 ggatagcaca cgccggcttc ggcacagccc tgataggtca aaaccaattt atacggttcg
    10021 ccgacagcct ttgcataagg aaaggcaacc tgcgcttcgt gatggtaaac cgtctgcctg
    10081 ccgaaaaact cgtcttcctt ctcttcgccc ttgctgaaag aaggctgtcc caacaaatcc
    10141 gccggatcgg tcttgccgac gattttcgcc tgatacatat agtatccgtc ggcaatcttg
    10201 aaacggacgt tcacaccgtc gtcggcaacg gcaagctccg gcacgaatgc cttttccggc
    10261 ggcagcagat cgttcgcatc cagcgcgaaa gctcgtccgc acaacatcaa aaatacggcg
    10321 aacaggcaaa tcagtttttt cataatcgaa tccgtttcag acaaataatt tgtctgcatt
    10381 ataaatggta aggttgacgg tgggatttaa tttatgtaaa acccgccatt atccgaacct
    10441 atttccataa ccatcttatc gaacccgcca tgtacgatgt caatacccac gatgtccgcc
    10501 gctttttcgc ccgcgtgtgg cagcagcggc tcaatccgct gcaactgagc gcactggaac
    10561 agaaagccct ccgcattgtc gaagcccatc ccgaatacca ccgctatctc gaacgcatcg
    10621 aagaccatct ggacaccgac tggctgcccg aaaacggcga aagcaacccc ttcctgcata
    10681 tgtcgctgca tctgtccgtc caagaacagg cgggcataga ccagccgcac ggcatacgcg
    10741 caatccacga caccctgtgc gccaaacgcg gctggctgga agccgaacac gaaatgatgg
    10801 aggcactggc ggaaacactg tggacggcgc aacgctacgg caccggtttg gatgtcaatt
    10861 tctacatgac ccgactgcgc aaactcatcg gcttgggtgc agaagatcaa gccaggttga
    10921 acccacatga aatcgcctga ccataccaac cgcctgcaaa atgccgtctg aagcggaaca
    10981 acccctttca gacggcatgc atttccccca tcatttccac aacgcgcgtt tcagcataat
    11041 caaccaatcc ttcttatcca aaacggggcg ttgtgcaaac acatcgtatc ggcacgcgtc
    11101 cagtttctgc aaaatcaact gcgcccctaa cacaatcata cggagttcca aaccgatacg
    11161 ccctttcaat tcgcgcgcta aaggcgaacc cgccttcagc atacgaaatg cgcgccggca
    11221 ctcatacgcc atcagccgct gaaacgccgc atccgcccta ccctccgcaa tctgtccttc
    11281 ggaaacaccg aatttcaaca aatcgtcctg cggaatataa accctgccct tttgccaatc
    11341 cacagccaca tcctgccaaa aattcaccag ttgcaaagcc gtacagatgc cgtcgctttg
    11401 cgccacgcac accgcatccg ttttcccgta caaagccagc ataatgcgtc cgacaggatt
    11461 ggcagaacgt cggcaataat cggccagctc gccgaaattt ccataccttg ttttaaccac
    11521 atcctgagaa aatgcagaaa gcaaatcata aaacggctgc aaatccaaac cgaacggcac
    11581 aaccgcctcg gcatccaatc gtgcaatcaa aggatgcgcc gaccggccgc ccgatgccaa
    11641 cacgtccaac tcgcgccgca aaccctccaa ccccgccaac ctggcttcag acggcatact
    11701 gccctcgtcc gccatatcgt ccgccgtccg tgcaaacgcg tacaccgcgt gaaccggctt
    11761 cctcaacctg cgcggcaaaa tcagcgaacc gacgggaaaa ttttcataat gcccaaccga
    11821 cataccttct ccatccatca aacaaaatgc cgtctgaaat ggaacaaacc cttttcagac
    11881 ggcatcagat acctccaagc tgccggcaat cagtggtggt gatgaccgtg cggaccgtgg
    11941 acatgaccgt gtgcgatttc ctcatcggat gcatcgcgca cactttcaac cgtagcctta
    12001 aagcggattt tcatgcctgc caaaggatgg ttgccgtcca ccaccgcctt gccgtcggca
    12061 acatcggtta cacgatagac gacaacatcg ccggtttcag gatcgtcggc ttcaaacatc
    12121 atgccgactt cgacttcaac agggaacacg cccgcatctt caatacggac caactccgga
    12181 tcctgctcgc cgaacgcatc gtcgggcgac agcgccacat cgaccgtatc gccggcatcc
    12241 ttaccgtgca acgcctcttc caccaaaggg aaaatgccgt cgtaaccgcc gtgcagatac
    12301 gcaatcggtt cttcggtttt gtccaaaagc tgattgttgg catcatacat ctcataatgc
    12361 agcgaaacca cggaattttt cacgatagcc atatttgtcc tttcaggaac agcagattga
    12421 ttacaggcgc attctaacac aaccgccgcg ccggccgatt accgttaacc tgttcataaa
    12481 ctgtacagca catatttcaa tgtaaatttt tgttatttta ttgcggtgta acttttttac
    12541 aacattctta aaaccattcc gacctgtctg ccgactttcc caatccgcct taataaatca
    12601 tacaagatac tgaaattata ttaatctcta taatatttat ccctatcgaa tttttaacag
    12661 caaaaccgtt ttacaggatt tatcaatccg cccgccagaa aacttttcat tcaaaccttt
    12721 ttcccatctg tacgacattg caatccctta ttccatagtg cataattacg caaattcagc
    12781 gatgaatttc caacccggtt tgtagtatgg tcgataaaag acctatttgt ttcaataatt
    12841 taaattggtt ctaaaggtta ctaaaatgaa aaaatccctg tttgccgctg ctttgttgtc
    12901 tttggtcctg gcagcctgcg gcggtgaaaa agccgctgaa gctcccgcta ccgaagcacc
    12961 tgccgctgaa gctcccgcta ctgaagcacc tgccgccgaa gctcccgcta ccgaagcacc
    13021 tgccgccgaa gctcccgctg ctgaagctgc cgctactgaa gcacctgccg ccgaagctcc
    13081 cgctgctgaa gctgccgcta ccgaagcacc tgccgctgaa gctcctgctg ccgaagctgc
    13141 aaaataagca ttttccgctt gcaaaaaagc aggatacgtt cagtatcctg cttttttgat
    13201 ttttcagacg gcatcagatt cccttcctca atcttctccc tacccttccg acaaacatgc
    13261 ctgaccttca taccgaattt tcccgactcc tgccggcaga tgaaattgcc gaactttctc
    13321 cgacgctttt aaaagaccag cgcaaccgct ttacgtctgc accagacatc attttgcagc
    13381 cgcgcagcgt tgaaagcgtg caaaccatta tgcgtttttg ttacgaacac cgtattccgg
    13441 ttacgccgca aggcggcaat accggtttgt gcggcgcggc agtatcggaa aacggcgtat
    13501 tgctgaacct ttccaaactc aaccgcatcc gcagcatcaa tttgtcagac aactgcataa
    13561 ccgtcgaagc aggttccgta ctccaaaccg tccaacaggc agccgaagcc tcaaacaggc
    13621 tgttcccact cagtctcgcc agcgaaggct cctgtcaaat cggcggcaac atcgcctgca
    13681 atgccggagg tttgaacgta ttgcgttacg gcacgatgcg cgacctgatt atcggtttgg
    13741 aagtcgtcct ccccaacggc gagctggttt cccatctcca tcccctgcat aaaaacacca
    13801 ccggctacga cctgcgccat ctgtttatcg gcagcgaagg cacactgggc atcatcactg
    13861 ccgccacact caagcttttt gcccgtccct cggacaaggc aacggcatgg gtcggcatac
    13921 ccgacatcga atccgccgtc cgcctgctga ccgaaaccca agctcacttt gccgaacgcc
    13981 tatgcagttt tgaactggtc ggccgttttg ccgccgagtt gtcttccgaa ttcagcaaat
    14041 tccccctgcc gacacattca gaatggcata ttttacttga gttgaccgac tcattacccg
    14101 acagcaatct tgatgatcgg cttgtcgaat ttctttataa aaaaggattt accgacagcg
    14161 tattggcaca aagcgaacaa gaacgtatcc atatgtgggc attgcgcgaa aacatctccg
    14221 catcgcaacg caaactgggc accagcatca aacacgatat tgccattcct atcggacgcg
    14281 ttgccgactt tgtccgccgg tgcgccaaag atttggaaca gaattttaaa ggcatacaaa
    14341 tcgtctgctt cggacatctt ggcgacggca gcctgcacta caatactttc ctgcccgaaa
    14401 tcctcagcaa tgaagtctat cgttacgaaa acgacatcaa cgacgcagtt tatcgcaacg
    14461 ttcttgcctg caacggcacg attgccgccg aacacggcat aggtatcatc aaaaaacagt
    14521 ggctggacaa agtacgcacg cctgccgaaa tcgccctgat gaaaagcatc aaacaacacc
    14581 ttgatccata taacattatg aatccgggca aactgcttcc gtaaccggca tttctgattt
    14641 gcatacacaa caaagaaagg gacaatagat ccgattgtcg gtttagcgcg agctcgtgag
    14701 tgcggtaaaa aattggtgga aatgacacga aaaatgaccg catttttaaa ataaaaaaat
    14761 cggcagtgaa tttccctgcc gattttattt tgttacaact taacttaaaa cgtccactgc
    14821 aaattcaacg caccttgttt agcctgatga tatttgcttg tttggcggtt gaatgaggct
    14881 tgtaaagtta agtgagattt gattttcact gctacaccta attggctctc aattgccgtc
    14941 ttattgttta tcactcgacg ctctccgtct atttccacac cgaaaggttt gttgtggtaa
    15001 agcgcgttca cagcggcgaa aggttcaata gcgatatttt tatagagtga aaattgagct
    15061 ttagcttgaa cgccaacccg agtttgtaat tggcgggagc caagtaaatt cacgtgggca
    15121 ttttcgctat cgctgaattt tccgtttacc cccaaataag tcaattgtgc ctgtggttgt
    15181 aggtaaacac gaaggctgtt gcccttttta gtgaagtgtt ctgccaataa agcattgtaa
    15241 cccgcttcaa ttgaggcggt aatacctttt gaagtaaaac gttctgtagc atcttcagtg
    15301 ttaatgcggt ggcggaagcg ttgatattgt acccagctat ccgcatacgc acctgtctgt
    15361 ttgtcctgaa gctgatgcca agtggcataa atgcccgccc caaagccttt cacatttccc
    15421 gttgtaagat tgtctgtatc tggattgcgg aaagtgctgc gttgttctgc ttgtccgctc
    15481 attaagccaa cggaaagttg attactttcg ttttgccatg tgaatacttc gccaccgagt
    15541 tgcacacctt tacgatagcc ttctacaggt gctgttttgc cttgcaccca ttggttggaa
    15601 tgtccgtcaa tcacacgcaa ccacaagcct ttgcgtggta aagtgcggtc aaaaatatcg
    15661 ctgtttttgt cgttcaaacg caaggcgaat aaggtattgg cggcttgagc ctgttgtgca
    15721 taaatcgaaa tatcatcgcg ttcttgcact ttggtaaaaa agccttctgg gcgttgttgt
    15781 aaagaaagcg tataaattcc cttttggtgt ttgccagaaa gacggaatgc gtgtttatct
    15841 gctgtgccat ttactttgat aatttgatgc ccgtcgagac tttttaaatc gtctattgga
    15901 ttttcgaaga tgatgtcgga agtgccagtt atattttttt caaaagttaa aactggtgtt
    15961 tcagagactt tatcttttag atcgtaagca aaacgaaaac gagctccgcc agcataatct
    16021 tcttttacga gtaaactttc acttttagta ttaaaacgga tgtctgcatt cgttgttttt
    16081 aattccccaa catcagaatc ccaacggggt tcccagagag aattttctaa gcggaattca
    16141 tccaaactaa ttgtttgtcc gataacgtgt gagttgtctg taacctcaat atagtggaat
    16201 ggatctaaac cagaatagag atgctcttgc caactaggaa gcttattaag tgttgggcga
    16261 agccattcga tataattacc tacagataaa atttcgctgt tgatatggct attttttatt
    16321 tgtggagcta aggcgaaaat atcgctcttt attaatcttg ggccagagtt ttcgaaggat
    16381 ggttgttcac acttatcatt attggaattc ccagtattta cacagtcctt aaaatattgc
    16441 tggagtgttt tttcttcttc cccatttctt ttttcaaccc cgaaacctcg ggcgaagcca
    16501 acaaggtaat cttcagtgta ttccttgtca taaaaagaaa tcttttttga gttgttgatg
    16561 tttttgaatt ggtgtgtttt agagtatagt gcgggaactt tgagagagtt ctgagagcta
    16621 ccattcgtcg gttttagaag ataagtttct tgtttccagt attcgctgct tttatctcta
    16681 agttttttta agcgatcaat ttgctcattt gttaatttag aattgtcgta aacgtaatca
    16741 acagccaaaa gcggagaggt ataaagaata gaaaaaaata gacttataat aaatgatttt
    16801 ttaaacttct gcttgcttgc ttgcttgctt cgagtttcat aataaatttt cctttgtcaa
    16861 gtaaaaataa atggggcgtg gattttagca taaaactgaa caaaaaatgt catttagctc
    16921 acatttttct ctatttattt cttatttatt aaaggtaaac gtttgctttt tgctattttg
    16981 tcaagccagt ttgaaaatgt gtataattgc cctcgttatt tacaaaaatt tcaggaaaaa
    17041 tgaccgcact ttacccttgg ctaatgccaa tttatcatca aattgctcaa acctttgatg
    17101 aaggtttggg gcatcatgct gtgctgatta aagcggattc tggtttaggt gtagaacgtt
    17161 tacacatcag gcggcagcct tgcccatacc gtctgaagca ctgtttccac aatcagcgcg
    17221 tatgcttaat caaccgctgt ttctcgcgtt tccaatccgc ctctttcata ctctgacgtt
    17281 tgtcgtgctg tttcttacct tttgccaaac cgatttccat cttgattttt ccgcgcgaaa
    17341 aatgcaaatc cagcggcacg atggtgtagc cggcacgttc ggttttgccg attaatttgt
    17401 tgatttccga ctggttcaac aagagcttgc gcggacgtac ggcatctggt ttaatgtgtg
    17461 tcgaggctgt gggcaaagcc gtaatatggc agccgaccag ataaaacgcg tcttttttcc
    17521 aatagatata actctcttta agctgtacgc gcgcggcgcg gattgctttg acttcccagc
    17581 cttccaagac caaaccggct tcaatccggt cttcaatgaa aaaatcgtga aatgcttttt
    17641 tattgttcgc aatagccata aacatcctat caatatccgc cgtcagacgg cataaacccg
    17701 aaaacagaac ccatcatacc gcctcttcaa ccgcctgcac aatcttctcg ggatacagct
    17761 tgttgaggca gtctgtatgc cctagcggac attcccgctt aaaacacggg gaacattcca
    17821 aatggaggct gacgattttt gccttatcgc tcaaaggcgg cgtgtgtgtc gggctggaag
    17881 aaccgtaaac cgccaccacc ttcctgccca atgccgccgc caagtgcatc agcccgctgt
    17941 cgttgcacac gaccgtgtcc gccaacgaca gcaaatccat tgcctgcgac aaatcggttt
    18001 tgccgcacaa attgacacac ataccgtctg aaaggcagtt gatttcctcg gcaatttcat
    18061 catctttttg cgaaccgaac agccaaacct gccaacccgc cgccagataa tgtttgccca
    18121 actcggcaaa atgccttgtc ggccaacgct ttgccggccc gaattccgcg cccgggcaaa
    18181 atgccaaaac aggctttcca agattcaaac cgaaagtttc gacagaaatt tcccgccgcc
    18241 gttcatcaat ggaaaactcg gggaatcccg aatgcccgtc aaaatcttcc tgactcggat
    18301 gcgcgagagc cgtatatctg tccaccatca aaggcagacg ttccttatcc agcctgcgta
    18361 tatcgttcaa cagaaaataa cggctttcac cgacataacc cgtccttttg gcaatacccg
    18421 ttgctagcgc gatgactgcc gatttcaaag aaccgggcaa cacaataacc tgatcgtatc
    18481 cgcgccgccc caaatccctg ccgacccgcc aacggcgttt caactccaac gcaccgtgtc
    18541 cgaacggatt ttcaagaatc tcattcactt ccggcatacg ctcaaacacc gccatcgacc
    18601 acttcggtgc gaacacatca atcgtgcaac cggggtgaag ttccttcaaa cggcggaaca
    18661 agggctgggt catcacgcag tcgcctatcc aactggggga aataatcagg attttgatgg
    18721 acataacaag aaaccgaaat cagacaggcg gaattttacc gcgaaaccgt tggaaaacct
    18781 atcttgtctc attccgaacg ccgtacgtgc aaatatgaaa aagcccgaac attcaagttc
    18841 gggcttcaaa attctggctc cccgacctgg gctcgaacca gggacctgcg gattaacagt
    18901 ccgtcgctct accgactgag ctatcgggga atggggcgta ttatagcgtc cggaaaaaat
    18961 gtgtcaatcc ttaattttgg aaaaatgggc gacaaaacga caagcatatg aatcagaaag
    19021 acattaagac cgatgcctta aaaggattgc cgttgtatga atttccacag ccgtcatcac
    19081 accatattta agcccgatga gccgttctgc cctcccccgc ttaaaacaat gccgtctgaa
    19141 cttcgccgcg ttccaaagcc agtaaaaact gtttgcggtt caacccgccc gcgtagccgg
    19201 tcagtttgcc gtcgctgccg atgacgcggt ggcagggaat caagatagac accttgttct
    19261 gcccgttggc ggcggcaacg gcgcggacgg cgttggggtt gcccaaacgc tgcgcctgct
    19321 ctttgtagct gcgcgtttcg ccgtaaggaa tcgccaagag cgcgtcccat gcctgctttt
    19381 gaaactcggt gccaatctgc tccaaaggcg tggcaaaggt tttcagacga cccttgaagt
    19441 ataagtccaa ttcctgccgc aaaagttgcg tccgctcatc ctcccgaaac acaaaccgtc
    19501 cgcgcaaggc tttttggacg gcggcaattt cctgttccaa atgcttctgt ccgacaaact
    19561 ccagcagaca caatccctta tttccgaaca ccgccagcat ctcgcccaaa ggcgtggcaa
    19621 tggcggcaca caccagctca ttcaaactgt cgggataacg cacttccaac agacggatgg
    19681 ctcggcggat acggacatat tcttcaggcg cgcagccgat attgtcccaa aaatcccgat
    19741 cgaactgccc ggcttcgcat tccgtcagat tgggatgcgg cataacgccg cactcaaaaa
    19801 cccgggtttc gaggcaatgg cggatttcat cccattttga cggcagattg tttaaggaag
    19861 gcagggtaat cattcgtttg ctccgtatct ctatcatgga tttggcggca aaatccccaa
    19921 tttttgccat tcccgcacgc cggagcagga acgggctatg acgtaaatct tgagggttag
    19981 gttgcggcaa tacctaaata ttcgatattt ctaaagcctc agggaaagga attaaagact
    20041 tcagacgacc tgcaaaggct cgtctgaaac cacgattttt gcatttgcgc attccggcac
    20101 atcatccaac cgtttcggca cattcctgcc gccgttgaca gcctataatg aatccactta
    20161 ttcatcaagc aaaggaaccg tctatgcaaa cccgcattct ctccgccgta ctgctggctt
    20221 tttcaaccgc tgcctttgcc gggggcgcat tcacgctgca attcgacaac ccgtccgaag
    20281 acggcggctt cacgcaaaac cagcttttga gcgcgcctta cggatttggc tgttcgggcg
    20341 gcaatgcttc gcccgcgctg tcgtggaaaa atccgcccgc cgggacaaaa agtttcgtcc
    20401 tgaccgttta cgataaagac gcgccgaccg gactgggctg gatgcaccgg gtggtcgccg
    20461 acattcccgc cgatgtccac cgccgcaacg cgacctcgct gcaattaagc cgctgcgcca
    20521 acatcgccga ccggactggg ctggatgcac tgggtggtcg ccgacattcc cgccgatgtc
    20581 cgccgccgca acgcggcctc gctgcaatta agccgctgcg ccaacatcgc cgacgaccag
    20641 tccgcagcca tatcggcggt aatcagtttg cggatttgcc gcatcaggtt gacgccttcg
    20701 tacacggcaa aaccgatgcc gtcatgctgc aaccacgcca acacgccgca aagcgcgacc
    20761 tccgccgcat tgtgcggcac ttcttcatcc gtcagcaccg ccgccgcata atcaaacgcc
    20821 gcgcccatcc gcccggggtg cggcagcttc accgcatcgc acactgcctg cgccgtcccg
    20881 tattgtgcgg cgaacctttc tacggtttcc tgttcgaaag caatccattg cgcctgatag
    20941 aggccgtcta gatcgggaat attaataacg tcaaacgtct gtccgcctgc caacgcgacc
    21001 gcctcacccg ccgcagcttc ttacttccgc gccgcacgat aagcacagcc ggttcatata
    21061 ccgccacgct gcggtacaag gcggtatgat gttgcacgat gccgcccaaa gcacccaatc
    21121 gtccgcgcgt atataaagta atttgacggc acggttatat tcctcaatgt ttcaacacac
    21181 agggccgcac ataaggcaca gccctgttta ccctgatttg gaaggggtta cttcccaaaa
    21241 aataaaccaa aatcccatcg cccagaaggg ccgggtttca accatattcc gtcggcgt
//
LOCUS       DBBZXU010000025        20688 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.025, whole genome shotgun sequence.
ACCESSION   DBBZXU010000025 DBBZXU010000000
VERSION     DBBZXU010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 20688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20688
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.025"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(63..239)
                     /locus_tag="ACJJDE_000802"
     CDS             complement(63..239)
                     /locus_tag="ACJJDE_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540756.1"
                     /translation="MKSRRFFKALLLIAALVGAFYAGMQTQAYLYEDLCLDLGGGKNP
                     GSYPICVIGKVSAR"
     gene            complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACJJDE_000803"
     CDS             complement(242..1600)
                     /gene="murF"
                     /locus_tag="ACJJDE_000803"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HGG7540757.1"
                     /translation="MKPLDLNFICQALKLPMPSESKPVSRIVTDSRDIRAGDVFFALA
                     GGRFDAHDFVEDVLAAGAAAVVVSREDCVAMDGALKVDDTLAALQTLAKVWRENVNPF
                     VFGITGSVGKTTVKEMLAAVLRRRFGDNAVLATAGNFNNHIGLPLTLLKLNEKHRYAV
                     IEMGMNHFGELAVLTQIAKPDAALVNNAMRAHVGCGFDGVGDIAKAKSEIYQGLCSDG
                     MALIPQEDANMAVFKTATLNLNTRTFGIDSGDVHAENIVLKPLSCEFDLVCGDERAAV
                     VLPVPGRHNVHNAAAAAALSLAAGLSLNDVAEGLKGFSNIKGRLNVKSGIKGATLIDD
                     TYNANPDSMKAAIDVLARMPAPRIFVMGDMGELGEDEAAAMHAEVGAYARDQGIEAAY
                     FVGDNSVEAAEKFGADGLWFAAKDPLIQVLRHDLPERATVLVKGSRFMQMEEVVEALE
                     DK"
     gene            complement(1725..2960)
                     /locus_tag="ACJJDE_000804"
     CDS             complement(1725..2960)
                     /locus_tag="ACJJDE_000804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HGG7540758.1"
                     /translation="MYRGGVFADVKNYKRRSKIWLTILLTLILSCAVMDKIASDKDLR
                     EPDAGLLLNIFDLYYDLASAPAQYAAKRAHILEAAKKASTWHIRHVAPKYKNYVVVIG
                     ESARSDYMNVYGFPLPDTPFLSQTKGLLINGYQSTAHATNLSLPQTLGLPGEPNNNIV
                     SLAKQAGFRTAWLSNQGMLGHFANEISTYALRSDYPWFTQRGDYGKSAGLSDRLLLPA
                     FKRVLIGNAGTKPRLIVMHLMGSHSDFCTRLDKDARRFQYQTEKISCYVSTIAQTDKF
                     LEDTVKILNENKESWSLVYFSDHGLMHVGKGGERTLTHGAWKRQSYGVPLVKISSDDT
                     RREMIKVRRSAFNFLRGFGSWTGIETDELPDDGYDFWGNVPDVPGEGNNLAFIDGLPD
                     DPAPWYAGKGKSTKNTSKK"
     gene            complement(2935..3372)
                     /locus_tag="ACJJDE_000805"
     CDS             complement(2935..3372)
                     /locus_tag="ACJJDE_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540759.1"
                     /translation="MKQSARIKNMDQTLKNTLGICALLAFCFGAAIASGYHLEYEYGY
                     RYSAVGALASVVFLLLLARGFPRVSSVVLLIYVGTTALYLPVGWLYGAPSYQIVGSIL
                     ESNPAEAREFVGNLPGSLYFVQALFFIFGLTVWRYCVSGGGIC"
     gene            complement(3395..4873)
                     /locus_tag="ACJJDE_000806"
     CDS             complement(3395..4873)
                     /locus_tag="ACJJDE_000806"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HGG7540760.1"
                     /translation="MFSKLTPLAETGIPTLSCANAAGRLLHSDSRQIKQGDIFVACPG
                     EYADGRSYIPAAVANGAAFVFWDDDGKFAWNPEWKVPNQGIKDLKHRAGILAAQVYGN
                     VSDGLKVWGVTGTNGKTSITQWLAQAADLLGEKTAIVGTVGNGFWGALEETTHTTPAP
                     VDVQTLLYRFRQQGATVAAMEVSSHGLDQSRVNGVSFRSAIFTNLTRDHLDYHGTMEA
                     YGAIKSRLFYWHGLKHAVINVDDEYGAELAGRLKKDCPDLAVYSYGFSEHADIRITDF
                     TASSDGIEAVFQTPWGEGKCHTRLLGRFNAQNLAACVALLCANGYPLDKVLDVLEKIR
                     PASGRMDCIMNSGKPLVVVDYAHTPDALEKALATLQEIKPQGAALWCVFGCGGNRDRG
                     KRPLMGAAAVQGADKVVVTSDNPRLENPHDIINDILPAVPAPECVEADRAAAIRYAVE
                     QAAANDIILIAGKGHENYQDVQGVKHRFSDLEIVGQALLTRK"
     gene            complement(4898..6643)
                     /locus_tag="ACJJDE_000807"
     CDS             complement(4898..6643)
                     /locus_tag="ACJJDE_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan D,D-transpeptidase FtsI family
                     protein"
                     /protein_id="HGG7540761.1"
                     /translation="MLIKSEYKPRMLPKEEQVKKPMTSNGRISFVLMAIAVLFAGLIA
                     RGLYLQTVTYNFLKEQGDNRIVRTQTLPATRGTVSDRNGAVLALSAPTESLFAVPKEM
                     KEMPSAAQLERLSELVDVPVDVLRNKLEQKGKSFIWIKRQLDPKVAEEVKALGLENFV
                     FEKELKRHYPMGNLFAHVIGFTDIDGKGQEGLELSLEDSLHGEDGAEVVLRDRQGNIV
                     DSLDSPRNKAPKNGKDIILSLDQRIQTLAYEELNKAVEYHQAKAGTVVVLDARTGEIL
                     ALANTPAYDPNRPGRADSEQRRNRAVTDMIEPGSAIKPFVIAKALDAGKTDLNERLNT
                     QPYKIGPSPVRDTHVYPSLDVRGIMQKSSNVGTSKLSARFGAEEMYDFYHELGIGVRM
                     HSGFPGETAGLLRNWRRWRPIEQATMSFGYGLQLSLLQLARAYTALTHDGVLLPVSFE
                     KQAVAPQGKRIFKESTAREVRNLMVSVTEPGGTGTAGAVDGFDVGAKTGTARKFVNGR
                     YADNKHIATFIGFAPAKNPRVIVAVTIDEPTAHGYYGGVVAGPPFKKIMGGSLNILGI
                     SPTKPLTAAAVKTPS"
     gene            complement(6704..6967)
                     /gene="ftsL"
                     /locus_tag="ACJJDE_000808"
     CDS             complement(6704..6967)
                     /gene="ftsL"
                     /locus_tag="ACJJDE_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HGG7540762.1"
                     /translation="MNKLNFLLLLAVCVSAFSVVMQQNQYRLNFTALDKAKKQEIALE
                     QDYAQMRLQQARLANHEAIRAAAEKQNLHPPVSGNTFMVAHQR"
     gene            complement(6964..7950)
                     /gene="rsmH"
                     /locus_tag="ACJJDE_000809"
     CDS             complement(6964..7950)
                     /gene="rsmH"
                     /locus_tag="ACJJDE_000809"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HGG7540763.1"
                     /translation="MSGAESYRHITVLLNEAVDALAVREDGVYVDGTFGRGGHSRLIL
                     SRLGDAGRLIVFDKDPQAIAVAEELARSDKRVGVVHGGFASFQTALDGLGIGKVDGAL
                     FDLGISSPQIDDGSRGFSFRFDAPLDMRMDTTRGMSAAEWIAVASEQDLHEVIKNYGE
                     ERFSRQIARAIVAQRAESPIDTTRKLAQIVAQNVRTRERGQDPATRTFQAIRIFINRE
                     LEEVGAVLPQVMCRLKEGGRLAVIAFHSLEDRIVKQFVKKYSQHAPLPRWAAVREADL
                     PEPPLKIAGRALKPGEAEIAANPRARSAVLRVAERTAGPIPEQSQRKTSEWQ"
     gene            complement(7947..8402)
                     /gene="mraZ"
                     /locus_tag="ACJJDE_000810"
     CDS             complement(7947..8402)
                     /gene="mraZ"
                     /locus_tag="ACJJDE_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HGG7540764.1"
                     /translation="MFGGAHELSIDSKGRLAVPAKFRDILSRLYTPAVVVTLESKHKL
                     LMYPVAEWEKVAAQLLNLKVADNPVLRRFQNLLLHNAEILEWDSAGRVLLPAGLRKRV
                     DFDREVVLVGRANRLELWGREQWEAEMVQALDDDPDELAFQLGQTDLQL"
     gene            8708..9898
                     /locus_tag="ACJJDE_000811"
     CDS             8708..9898
                     /locus_tag="ACJJDE_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7540765.1"
                     /translation="MSGNPINLHKLTLIMPLPLPSPEARQFSLKLQTLIAEKIGKHGN
                     WIPFSRFMELVLYAPQYGYYTGGSHKIGNTGDFITAPTLTSLFAQTLARQLQELLSQT
                     AGNIYEFGAGTGQLAADLLGSISDGISRYYIIEISPELAARQKNLIQARAPEASQKVV
                     HLTALPEAFDGIIIGNEVLDAMPVEIVRKNEGGSFEHVGVCLDNDRFTYSARPLHDLQ
                     LSALASLYFPQTDYPYTSELHPQQYAFIRTLASRLERGGMIFIDYGFDAAQYYHPQRN
                     QGTLIGHYRHHVIHNPFDFIGLADLTAHVNFTDIAQAGTDAGLDLTGYLPQSHFLLNL
                     GITELLAQVGKTDSPAYIREAAAVQKLIDQHEMGELFKVIAFGKNIGVDWAGFRFGDI
                     CHKL"
     gene            10030..10106
                     /locus_tag="ACJJDE_000812"
     tRNA            10030..10106
                     /locus_tag="ACJJDE_000812"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10064..10066,aa:Met,seq:cat)
     gene            10114..10189
                     /locus_tag="ACJJDE_000813"
     tRNA            10114..10189
                     /locus_tag="ACJJDE_000813"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10147..10149,aa:Ala,seq:ggc)
     gene            complement(10480..11301)
                     /locus_tag="ACJJDE_000814"
     CDS             complement(10480..11301)
                     /locus_tag="ACJJDE_000814"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HGG7540766.1"
                     /translation="MDFLIVLKALMMGLVEGFTEFLPISSTGHLIVFGNLIDFHSNHK
                     VFEIAIQLGAVLAVVFEYRQRFSNVLHGVGKDRKANRFVLNLAIAFIPAAVMGLLFGK
                     QIKEHLFNPLSVAVMLVLGGFFILWVEKRQSRAEPKIADVDALRPIDALMIGVAQVFA
                     LVPGTSRSGSTIMGGMLWGIERKTATEFSFFLAVPMMVAATAYDVLKHYRFFTLHDVG
                     LILIGFIAAFVSGLVAVKALLKFVSKKNYIPFAYYRIVFGIVIIILWLSGWISWE"
     gene            complement(11334..11978)
                     /locus_tag="ACJJDE_000815"
     CDS             complement(11334..11978)
                     /locus_tag="ACJJDE_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7540767.1"
                     /translation="MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIE
                     VLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVVWQPEMLGLARMAAAVNLSGL
                     KYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
                     LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK"
     gene            complement(11981..12826)
                     /gene="ftsN"
                     /locus_tag="ACJJDE_000816"
     CDS             complement(11981..12826)
                     /gene="ftsN"
                     /locus_tag="ACJJDE_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7540768.1"
                     /translation="MNKFSQSGKGLSGFFFGLILATVIIAGILFYLNQSGQNAFKIPV
                     PSKQPAETEILKPKNQPKEDIQPEPADQNALSEPDAATEAEQSDAEKAADKADEVEEK
                     AGEPEREEPDGQAVRKKVLTEEREQTVREKAQKKDAETVKKQAVKPSKETEKKAPKEE
                     KKAEKEKVAPKPTPEQILNSGSIEKARSAAAKEVQKMKTSDKAEATHYLQMGAYADRR
                     SAEGQRVKLAILGISSKVVGYQAGHKTLYRVQSGNMSADAVKKMQDELKKHEVASLIR
                     SIESK"
     gene            complement(12932..14428)
                     /locus_tag="ACJJDE_000817"
     CDS             complement(12932..14428)
                     /locus_tag="ACJJDE_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
                     /protein_id="HGG7540769.1"
                     /translation="MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKE
                     SRDRVRAAIIQSGFEFPAKKITVNLAPADLPKESGRFDLPIAIGILAASGQVAPEKLA
                     EYEFAGELALSGLLRPVRGALAMAWQGMQAKRAFVLPEENAGQAAVMRGITVYGARSL
                     GEVAAHLNGIEPLVQTDCQVPQMPSENTKLLDLVDVKGQHTARLALEIAAAGGHSLLM
                     MGPPGTGKSMLSQRLPGILPPLTEDELVEVWALRSLLPNHQQQLDSNRPFRSPHHSAS
                     AAAMVGGGSDPRPGEISLAHHGVLFLDELPEFDRKVLEVLREPLENGEIHISRAARQA
                     VYPAKFQLVAAMNPCPCGYLGHPVKPCRCTPESVARYRSKISGPLLDRIDLTIEVPSL
                     SAAELMQQEAGESSVSVLERVIAARDKQYARQGKVNAALSVSELDTSARIQKEAQEAL
                     GGLLEKLSLSARSFHRIMRVARTLADLAGDEEVGRSHVMKAIGFRRAL"
     gene            complement(14442..14762)
                     /locus_tag="ACJJDE_000818"
     CDS             complement(14442..14762)
                     /locus_tag="ACJJDE_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003763371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HGG7540770.1"
                     /translation="MFGKQLFEEVGSKISETIANSPAKDVEKNIKAMLGGAFNRMDLV
                     TREEFDIQQQVLIKTRTKLAALEARLAKLEAAQNPERAALEAAEAAAEEAVAEIRQQT
                     EAGE"
     gene            15245..16771
                     /gene="putP"
                     /locus_tag="ACJJDE_000819"
     CDS             15245..16771
                     /gene="putP"
                     /locus_tag="ACJJDE_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005298 - proline:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0031402 - sodium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0015824 - proline transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HGG7540771.1"
                     /translation="MNPMYITFAIYLVAVLLIGLAAYFSTRNFDDYILGGRSLGPFVT
                     AMSAGASDMSGWLLMGLPGAIYLSGLNEAWIAIGLLVGAYFNWLLVAGRLRVHTEYAN
                     NALTLPDYFFHRFGAGGHLMKVVSALIILFFFTIYCASGIVAGATLFQSLFEGMTYNQ
                     AMWLGAGATIAYTFLGGFLAVSWTDTLQASLMIFALILTPVMVYLGLGGAEQMSAAIQ
                     SVAAGTGKEYGSLFAGTTVIGIISTAAWGLGYFGQPHILARFMAAESAKSLVSARRIG
                     MTWMALCLAGAVAVGYFGIAYFGANPDKVSSMSGNHERIFIALSTLLFNPWIAGIILS
                     AILAAVMSTLSCQLLVCSSAITEDFYKGFLRKNAQQSELVWVGRLMVLAIAVISILIA
                     SDPNSKVLGLVSYAWAGFGAAFGPIVILSVLWKRITAYGALSGMVAGALTVVVWAEWI
                     KKPAQAAGESGLLTMYEIVPGFIVCLIIAVLVSLFNKEPSREIQKRFEKADADYRAAR
                     "
     gene            complement(16861..17028)
                     /locus_tag="ACJJDE_000820"
     CDS             complement(16861..17028)
                     /locus_tag="ACJJDE_000820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540772.1"
                     /translation="MKHFLDSPKFFGGQAASVRPEYGNIVINPQMKYKASNAGRVGAS
                     VSLKMKRVKHK"
     gene            17020..20625
                     /gene="putA"
                     /locus_tag="ACJJDE_000821"
     CDS             17020..20625
                     /gene="putA"
                     /locus_tag="ACJJDE_000821"
                     /EC_number="1.2.1.88"
                     /EC_number="1.5.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0003842 - 1-pyrroline-5-carboxylate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0004657 - proline dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0010133 - proline catabolic process to
                     glutamate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase PutA"
                     /protein_id="HGG7540773.1"
                     /translation="MFHFAFPAQTALRQAITDAYRRNEIEAVQDMLQRAQMSDEERNA
                     ASELARRLVTQVRAGRTKAGGVDALMHEFSLSSEEGIALMCLAEALLRIPDNATRDRL
                     IADKISDGNWKSHLNNSPSLFVNAAAWGLLITGKLTATNDRQMSSALSRLISKGGAPL
                     IRQGVNYAMRLLGKQFVTGQTIEEALQNGKEREKMGYRFSFDMLGEAAYTQADADRYY
                     RDYVEAIHAIGKDAAGQGVYEGNGISVKLSAIHPRYSRAQHGRVMGELLPRLKELFLL
                     GKKYDIGINIDAEEANRLELSLDLMEALVSDPDLAGYKGIGFVVQAYQKRCPFVIDYL
                     IDLARRNNQKLMIRLVKGAYWDSEIKWAQVDGLNGYPTYTRKVHTDISYLACARKLLS
                     AQDAVFPQFATHNAYTLGAIYQMGKGKDFEHQCLHGMGETLYDQVVGPQNLGRRVRVY
                     APVGTHETLLAYLVRRLLENGANSSFVNQIVDENISIDRLIKSPFDTIAEQGIHLHNA
                     LPLPRDLYGKCRLNSQGVDLSNENVLQQLQEQMNKAAAQDFHAASIVNGKARDVGEAQ
                     PIKNPADHDDIVGTVSFADAALAQEAVGAAVAAFPEWSATPAAERAACLRRFADLLEQ
                     HTPALMMLAVREAGKTLNNAIAEVREAVDFCRYYANEAEHTLPQDAKAVGAIVAISPW
                     NFPLAIFTGEVVSALAAGNTVIAKPAEQTSLIAGYAVSLMHEAGIPTSALQLVLGAGD
                     VGAALTNDARIGGVIFTGSTEVARLINKALAKRGDNPVLIAETGGQNAMIVDSTALAE
                     QVCADVLNSAFDSAGQRCSALRILCVQEDVADRMLDMIKGAMDELVVGKPIQLTTDVG
                     PVIDAEAQQNLLNHINKMKGVAKSYHEVKTAADVDSKKSTFVRPILFELNNLNELQRE
                     VFGPVLHVVRYRADELDNVIDQINSKGYALTHGVHSRIEGTVRHIRSRIEAGNVYVNR
                     NIVGAVVGVQPFGGHGLSGTGPKAGGSFYLQKLTRAGEWVAPTLSQIGQADEAALKRL
                     EALVHKLPFNAEEKKAAAAALGHARIRTLRRAETVLTGPTGERNSISWHAPKRVWIHG
                     GSTVQAFAALTELAASGIQAVVEPDSPLASYTADLEGLLLVNGKPETAGISHVAALSP
                     LDSARKQELAAHDGALIRILPSENGLDILQVFEEISCSVNTTAAGGNASLMAVAD"
BASE COUNT         4852 a         5963 c         5051 g         4822 t
ORIGIN      
        1 cgggcctgcg cccgtttgag gttggcttgc cgcccggcaa ggtttcggac ggcttttgca
       61 gattaacgtg cagagacttt cccaatcacg caaatcgggt aactccccgg atttttgccg
      121 ccacccaagt ctaaacataa atcttcataa agatacgcct gcgtctgcat tccggcataa
      181 aacgcgccga ccagcgcggc aatcaacaat aaggctttaa aaaaacgtcg acttttcatt
      241 ttcacttatc ctccaatgcc tcgaccactt cttccatctg cataaagcgc gaacctttca
      301 ccaacacggt ggcgcgttcg ggcaaatcgt ggcgcaacac ttgaatcaac gggtctttgg
      361 cggcgaacca caaaccgtcc gcgccaaatt tttccgccgc ttcgacgctg ttgtcgccga
      421 caaaataagc cgcttcgatg ccttggtcgc gagcatacgc gccgacttcg gcgtgcatgg
      481 cggcggcttc gtcctcaccc agttcgccca tatcgcccat cacgaaaata cgcggcgcag
      541 gcatacgcgc caacacgtca atcgcggctt tcatgctgtc agggttcgca ttataagtat
      601 cgtcaatcag ggttgcgccc ttgattccgg atttgacgtt cagacggcct ttgatattgc
      661 tgaagccttt caaaccttcc gccacatcgt tcaaactcaa acctgcagcc aaagacagcg
      721 cggcggcagc ggcggcgttg tggacattgt ggcggccggg aacaggcagc accacggcgg
      781 cgcgttcgtc gccgcacacc aaatcaaatt cgcacgacaa cggtttcagc acgatatttt
      841 ccgcgtggac atcgccgcta tcgatgccga aagtgcgcgt attcaaatta agcgttgccg
      901 ttttgaagac agccatattg gcatcttctt gaggaatcag tgccatgccg tctgaacata
      961 agccttgata aatctcgctt ttcgctttgg caatatcgcc cactccgtcg aaaccgcagc
     1021 cgacatgggc gcgcatggcg ttgttgacca atgcggcatc gggtttggcg atttgtgtca
     1081 aaaccgccag ttcgccaaaa tggttcatac ccatttcaat cacggcatag cggtgttttt
     1141 cgtttaattt caacaaagtc aacggcaatc cgatgtggtt gttgaagttg cctgccgtcg
     1201 ccaaaacggc attatcgccg aaacggcggc gcaataccgc agccagcatc tccttcaccg
     1261 tcgtcttgcc gaccgaaccg gtaatgccga acacaaacgg attcacattt tcacgccaca
     1321 cctttgccaa cgtttgcaat gcggcaagcg tgtcatcgac tttcaacgcg ccatccattg
     1381 caacgcaatc ttcgcgcgaa accacaaccg ccgccgcacc agcagccaat acgtcttcaa
     1441 caaaatcatg cgcatcaaac cgcccgcccg ccaatgcgaa aaacacatcg cccgcgcgga
     1501 tgtcgcggct gtcggttacg atgcgcgaca cgggtttgct ttcagacggc atcggaagct
     1561 tgagggcttg gcagatgaaa tttaggtcca gtggtttcat atttactttc gttaatattc
     1621 gggcggcgga cacatcggta gcggctgatt tttttatcgc ctgttttgct gtggtaaaac
     1681 acagattatt ttcccattct cattcggcat tttttctgta cgtatcattt tttagacgta
     1741 tttttagtcg atttgccttt tcccgcatac cacggcgcgg ggtcgtcggg cagtccgtcg
     1801 ataaaggcaa ggttattgcc ttcgcccggc acatcgggaa cattccccca aaaatcatag
     1861 ccgtcatcgg gcaactcgtc ggtttcgata cccgtccaac tgccgaatcc gcgtaaaaaa
     1921 ttaaacgcgc tgcgcctcac tttaatcatt tcgcgccgcg tgtcatcgga cgaaatttta
     1981 accagcggca cgccgtagct ttgacgcttc cacgcaccat gtgtcaacgt tcgctcgccg
     2041 cctttaccga catgcatcaa accgtggtcg gaaaagtaaa ccaaagacca gctttcttta
     2101 ttttcattca atatcttaac tgtatcttct aaaaatttat cggtttgcgc gatggtggaa
     2161 acatagcagg atattttttc agtttgatac tgaaaccgcc gcgcatcctt atccaaacgt
     2221 gtgcaaaaat cactgtgcga acccatcagg tgcatcacaa tcagccgagg cttcgtgcct
     2281 gcatttccta tcaaaacccg tttgaacgcc ggcaacaaaa ggcggtcgct caaccccgcg
     2341 cttttgccat aatcacccct ttgggtaaac cacggataat cgctgcgtag ggcataggtg
     2401 gaaatttcgt tggcaaaatg ccccaacatt ccttgattag acagccacgc cgtccgaaaa
     2461 cccgcctgct tcgccaagct gacgatgtta ttgttcggtt ctcccggcag ccccaaagtc
     2521 tgcggcagcg aaagattcgt cgcgtgggcg gtcgattggt aaccgtttat caacagccct
     2581 ttggtctgac tcaaaaaagg cgtatcgggc aatgggaaac cgtaaacatt catataatcc
     2641 gaacgcgcgc tctcaccgat aaccacaaca taatttttat acttgggcgc aacatgacgg
     2701 atatgccatg ttgacgcttt ttttgctgct tccaaaatgt gggcgcgctt ggcggcatat
     2761 tgtgccggcg cggaagccaa atcgtaatac aggtcgaaaa tattcaacaa caggccggca
     2821 tcaggttctc gcaaatcttt atcgctggcg attttatcca tcaccgcgca ggacaaaatc
     2881 aaagtcaata atatagtcag ccatattttg ctgcggcgtt tatagttttt tacgtcagca
     2941 aatacccccc cccgatacac aatatctcca aactgtcaag ccaaaaatga aaaataatgc
     3001 ctgcacaaaa taaagcgacc cgggaagatt gccgacaaat tcacgcgcct cggcaggatt
     3061 gctttccaat atcgaaccga ctatctgata agacggcgca ccatacagcc agccgaccgg
     3121 caaatatagg gcggttgtgc cgacgtaaat cagtaaaaca actgaagaaa cgcgcgggaa
     3181 accgcgtgcc aataataata aaaatacaac cgaagccaaa gcacccacgg cagaataacg
     3241 gtagccgtat tcatattcca agtgataacc tgatgcgatg gccgcgccaa aacaaaaggc
     3301 taaaagcgcg caaatgccca atgtattttt taatgtctga tccatatttt ttattcgggc
     3361 ggattgtttc atacgatgcc gtccgaatat cccattattt acgagttaac aaagcctgtc
     3421 cgacgatttc aagatcggaa aaacggtgct tcacgccttg tacatcctga tagttttcat
     3481 gccctttgcc ggcaatcagg atgatgtcgt ttgcggcggc ttgttcaacc gcataacgga
     3541 tggcggcggc acggtcggct tcgacgcatt cgggcgcggg aacggcaggc aggatgtcgt
     3601 tgatgatgtc gtgcggattt tccaagcgcg ggttgtcgct ggtgacgacg actttatccg
     3661 cgccctgtac ggctgccgcg cccatcagcg ggcgtttgcc gcgatcgcgg ttaccgccgc
     3721 aaccgaatac gcaccacaaa gccgcaccct gcggtttgat ttcctgcaag gtggcgagtg
     3781 ctttttccaa tgcgtcgggc gtgtgggcat aatcgacaac aaccaaaggt ttgccgctgt
     3841 tcataataca atccatacgg cctgaagcag gacggatttt ttccagtaca tccaatacct
     3901 tatccagcgg atagccgttg gcgcaaagca aagcgacaca ggcggcgaga ttttgcgcgt
     3961 tgaaccgtcc gagcaggcgc gtgtggcatt tcccttcgcc ccacggggtt tggaatacgg
     4021 cttctatgcc gtctgaagag gcggtaaagt cggtaatgcg gatgtcggcg tgttcgctga
     4081 agccgtaact gtaaacggcc aaatcggggc agtctttttt cagacgacct gcgagttccg
     4141 cgccgtattc gtcatctaca ttgataacgg cgtgtttcaa gccgtgccag taaaacaggc
     4201 gcgacttgat ggcaccgtag gcttccatcg tgccgtggta gtcgaggtgg tcgcgggtga
     4261 ggttggtaaa gattgcgctg cggaatgaca cgccgttgac gcgcgactgg tcaagcccgt
     4321 ggctggagac ttccatcgcg gcgactgttg cgccttgttg acggaaacgg tagagcaggg
     4381 tttggacatc gacgggggcg ggtgtggtat gcgtggtttc ttccaatgca ccccaaaagc
     4441 cgttgccgac cgtgccgaca atggcggttt tttcgcccaa caaatcggca gcttgcgcca
     4501 gccattgcgt gatggaggtt ttgccgttgg ttccggttac gccccagact ttgagaccgt
     4561 ctgaaacgtt gccgtaaact tgcgccgcca atatgccggc acggtgtttc aaatctttga
     4621 tgccttgatt ggggactttc cattcgggat tccacgcgaa tttgccatcg tcgtcccaaa
     4681 aaacaaaagc cgcaccgttg gcaacggcgg cggggatata actgcgtccg tcggcatatt
     4741 cgcccggaca ggcaacgaaa atatcgcctt gtttgatttg gcggctgtct gaatgcaaca
     4801 aacgccctgc cgcgtttgca cacgacaggg tcgggatgcc ggtttcagcc aaaggggtta
     4861 acttgctgaa cataaaacaa tctcgttgat actcggatta agacggtgtt ttgacggctg
     4921 cggcggtcag tggcttggtc ggggaaatgc ccaagatgtt caggctgccg cccataattt
     4981 ttttgaaggg cggccctgcc actacgccgc cgtaataacc gtgggcagtc ggttcgtcaa
     5041 tggttaccgc cacaatcaca cgggggtttt tggcgggggc aaaaccgata aaggtagcga
     5101 tgtgtttgtt gtcggcataa cgcccgttga cgaacttgcg cgccgtgccg gttttcgcgc
     5161 cgacatcgaa accgtccacc gcacccgccg taccggtgcc gcccggctcg gtcacggaaa
     5221 ccatcagatt gcgtacctcg cgcgcggtcg attctttgaa tatgcgtttg ccttgcggcg
     5281 caaccgcctg tttttcaaag ctgaccggca gcaaaacgcc gtcgtgcgtc agtgcggtat
     5341 aggcgcgcgc caattgcagc aggctcaatt gcaggccgta accgaaagac atcgtcgcct
     5401 gttcgatggg ccgccacctg cgccaatttc tcaacaaacc tgcagtttcg cccggaaagc
     5461 ccgagtgcat acgcacaccg atgcccaact catgatagaa gtcatacatt tcttcggcac
     5521 cgaaacgcgc agacagtttg cttgtgccga cgttggacga tttctgcatg atgccgcgca
     5581 catccaaaga ggggtaaaca tgggtatcgc gcacgggaga cggtccgatt ttataaggct
     5641 gcgtattcag ccgttcgttc aaatcggttt tgcccgcatc caatgctttc gcaatcacaa
     5701 acggtttgat tgccgaaccg ggttcgatca tatcggttac ggcacggttg cgccgctgtt
     5761 cgctgtctgc ccggccgggc ctgttgggat cgtaggcggg cgtattggcc aaggcgagga
     5821 tttcccccgt gcgggcatcc aaaaccacca ccgttccggc ttttgcctga tggtattcga
     5881 ccgccttgtt caactcttca taggccaagg tctgaatcct ctgatcgagg gaaaggatga
     5941 tgtctttgcc gtttttcggg gctttattgc gcggggagtc caagctgtcc acaatattgc
     6001 cctgccggtc ccgcaaaacg acttccgcgc cgtcttcgcc atgcaggctg tcttcaagcg
     6061 aaagttccaa accttcctga cctttgccgt caatatcggt aaatccgatg acgtgtgcaa
     6121 acaggttgcc catcgggtaa tggcgtttta attctttttc aaatacaaag ttttccaaac
     6181 ccaaggcttt gacctcttcg gcaaccttgg gatcgagctg ccgcttaatc cagataaacg
     6241 acttgccttt ctgttcgagc ttgttcctca aaacatcaac cggcacatcg acaagctcgg
     6301 acaggcgttc caattgtgcg gcagacggca tttccttcat ctctttaggc acggcaaaca
     6361 gggactccgt cggcgcactc aacgccaaaa ccgcaccgtt ccggtccgaa accgtaccgc
     6421 gtgtagccgg caatgtttga gtccgcacaa tccggttgtc gccctgttct ttcaaaaagt
     6481 tatacgttac cgtctgcaga tacagtccgc gggcaatcag accggcaaac aagaccgcta
     6541 ttgccatcag gacgaagctg atccgtccgt tactggtcat cggctttttg acctgctctt
     6601 ctttgggcag catccggggc ttatattcac tcttaatcaa catttttact tctcgttatt
     6661 attatcctga cgcaggaatc cgattccggc acacaggctg cttctatctt tgatgcgcca
     6721 ccataaaggt attgcccgaa accggcggat ggaggttttg tttttctgcc gccgccctga
     6781 tcgcttcgtg gttcgccaaa cgcgcctgtt gcagcctcat ttgcgcataa tcctgctcca
     6841 aggcgatttc ctgttttttc gccttatcca aagctgtgaa gttgagcctg tactggtttt
     6901 gctgcatcac aacggaaaaa gcggaaacgc acaccgcaag cagcagaagg aaattcaatt
     6961 tgttcattgc cattcagacg tttttctctg tgattgttcc ggtatcggac cggcagtccg
     7021 ctccgccaca cgcaaaaccg cacttctcgc cctcggattg gcggcaattt ccgcctcacc
     7081 cggctttaat gccctgcccg cgattttcag gggcggctcg ggcaaatccg cttccctgac
     7141 cgccgcccag cgcggcaggg gcgcgtgttg cgaatatttt ttgacaaact gcttcacaat
     7201 gcggtcttcc aacgaatgga aagcaatgac cgccaaacgt ccgccctctt tcagacgaca
     7261 catgacctgc ggcaatactg cccctacttc ttcaagctcg cggttaataa agatgcggat
     7321 tgcctggaag gtgcgcgtcg caggatcctg cccccgctcg cgagtacgga cgttttgtgc
     7381 cacgatctgc gccagcttgc gggttgtatc gattggactt tccgcccgtt gcgcaacaat
     7441 ggcgcgcgca atctggcggc taaaccgctc ttcaccataa ttcttgatta cctcgtgcaa
     7501 atcctgttcc gacgcaaccg ctatccactc tgcggcagac ataccgcgcg tcgtatccat
     7561 acgcatatcc aaaggggcat cgaaacggaa gctgaaaccg cggctgccgt catcgatttg
     7621 cggggacgaa atccccaaat caaacagcgc accgtccacc ttgccgatac ccaaaccgtc
     7681 caatgccgtc tgaaacgaag caaaaccgcc atgcacgaca ccgacccgtt tgtccgaacg
     7741 cgccagctct tctgccacag caatcgcctg cggatctttg tcgaaaacaa tcaaccgccc
     7801 cgcatcgccc aaacgcgaca aaatcagccg ggaatgccct cccctgccga acgtaccgtc
     7861 cacatagaca ccgtcttcgc gcacggcaag cgcatccacc gcctcattca gcaagaccgt
     7921 gatatgccgg taactttctg ctccactcac aattgcaaat ccgtctgacc caactggaag
     7981 gcaagttcgt caggatcgtc atccaaagcc tgaaccatct cagcctccca ctgctcgcga
     8041 ccccaaagct ccaaacggtt ggcacgaccg accaaaacga cttcacggtc gaaatccacc
     8101 cttttcctca gtccggcagg aagcagcacc cggccggcgc tgtcccattc caaaatttcc
     8161 gcgttatgca gcaaaagatt ttgaaaccgc cgcaaaacag ggttatccgc cacttttaag
     8221 tttaaaagtt gcgccgcaac cttttcccac tccgcaacag ggtacatcaa cagcttgtgt
     8281 ttcgactcga gcgttaccac tacggcaggc gtatagaggc gcgacagaat gtcacggaat
     8341 ttggcaggaa cagccaaccg ccccttactg tcgatgctta attcgtgtgc gccgccgaac
     8401 atgacatgtc ccaagccgaa atcaaaatca caagggtaaa agagacactt tgccccacaa
     8461 ttccccacca atcgacacta taagaaattt taaacactcg gtcaaatcag ggcatgaaaa
     8521 ctcattaaca tatctgaaat ttttattcct tttaaaaaca ataagataaa aaatgacgac
     8581 aacggcacgg cgggtgcggt acagaataat cgaaccaata aacaactata tatgattaat
     8641 ttaataatat aaacacaata tatagtatta agataaagcc atgacagcac ccgtaccaac
     8701 gtgtaatatg tcgggaaatc caataaattt acacaagcta acacttatca tgcccctccc
     8761 tctcccctct cccgaagcac ggcaattctc gctcaaactg caaaccctca ttgccgaaaa
     8821 aatcggcaaa cacggcaact ggattccatt ttcacgtttt atggaattgg ttttatacgc
     8881 tccgcaatac ggctactaca ccggcggcag ccataaaatc ggcaataccg gggattttat
     8941 taccgcaccg accctcacct ctctgtttgc acagacactg gcacgccaac ttcaagaact
     9001 tctatcccaa acggcgggca atatctatga attcggcgcg ggaaccggac agcttgccgc
     9061 cgatttgttg ggcagcattt cggacggcat cagccgttac tatattattg aaatatcgcc
     9121 ggagctggca gcacgtcaga aaaacctgat tcaagcacgc gcaccggaag catctcaaaa
     9181 agttgtccac ttgaccgcac ttcccgaagc gtttgacggc atcatcatcg gcaacgaagt
     9241 actcgatgcc atgcctgtcg aaatcgtccg taaaaatgaa ggcggctcat tcgagcatgt
     9301 cggcgtttgc ctagataatg accgttttac ctattcggca cgaccgctgc acgacttaca
     9361 gctatctgcc ttggcttccc tctattttcc tcaaacagat tatccctaca ccagcgaact
     9421 acatccgcaa caatatgcct ttatccgcac ccttgcctca aggcttgaac gcggaggtat
     9481 gatattcatc gactacggtt ttgatgcagc gcagtattac caccctcaac gcaatcaagg
     9541 tactctgatc ggacactacc gacatcacgt tatccacaat ccttttgact tcatcgggtt
     9601 ggccgacctg accgcgcatg tcaactttac cgacattgcc caagccggta cggatgcagg
     9661 actggatttg acaggctatc tgccccagtc ccattttctg ctgaatctgg gcataaccga
     9721 actgttggca caagtgggaa aaacagactc gcccgcctac atccgtgaag ctgctgccgt
     9781 tcagaaactg attgaccagc atgaaatggg agaattgttt aaagtcatcg cattcggtaa
     9841 aaatatcggc gtcgactggg caggattccg cttcggcgac atctgccaca aactctaacc
     9901 ctcatgccgc ctgaatccgc ttcagacgac ataaactttt taacatttaa aaacagtcaa
     9961 ctaattcaaa attaaaaaat acggcttgtc aaaaaaacag aaaaacatat aatagtgtct
    10021 tcacgaaacg gcgaattagc tcagtcggtt agagcagagg aatcataatc cttgtgtccg
    10081 gggttcgaat ccctgattcg ccaccaaatt ttcgggggta tagctcagtt ggtagagcgc
    10141 ttgcatggca tgcaagaggt cagcggttcg atcccgctta cctccaccag ataaaaaagc
    10201 acagaccgta aaaaggtatg tgctttttta ttacctgatt gccgggaaat aaagaacaaa
    10261 ccactgcctt caaaacaggc aatcgacttt aaacctatcg ccccgcctgt cctgatttta
    10321 tagtgaatta aatttaaacc ggtacagcgt tggctcgcct tgccgtacta tctgtactgt
    10381 ctgcggcttc gtcgccttgt cctgattttt gttaattcac tatatcagcc cgccagacaa
    10441 acccgacccg aataatgtct tcaggtcggg tttatggttt cattcccaac ttatccagcc
    10501 cgacaaccac aatattatga tgacgatgcc gaaaacaatg cggtaatagg caaacgggat
    10561 atagtttttc ttggaaacaa acttcagcag tgctttgacc gctactaaac cggaaacaaa
    10621 agcggcaata aagcctatca gaatcaaacc gacatcatgc agggtgaaaa accggtaatg
    10681 tttcaggaca tcataagccg ttgcggcaac catcatcgga acggccaaga aaaatgaaaa
    10741 ctccgttgcc gttttccgct cgattcccca aagcatcccg cccataatcg tactacccga
    10801 acgggacgta cccggaacca gtgcaaacac ttgggcaacg ccgatcatca acgcatcaat
    10861 cggacgcaat gcatcaacat cggcaatttt aggctctgcc cggctttggc gtttctccac
    10921 ccacaaaata aaaaaaccgc ccaaaaccag catgaccgcc acactcaaag gattgaacag
    10981 atgttcttta atctgtttgc cgaacaacag ccccatcacg gcggcaggta taaaagcaat
    11041 ggcaagattg aggacgaagc ggttggcttt ccggtctttt cccacgccat gcaacacatt
    11101 gctgaaacgc tgccggtatt caaacactac cgccaaaact gcaccgagct ggatggcaat
    11161 ttcaaaaacc ttgtgattgc tgtgaaaatc aatcagattg ccgaacacaa tcaaatgtcc
    11221 ggtgctggaa atcggtaaaa attcggtaaa accttctacc aagcccatca tcagggcttt
    11281 caggacaatc agaaaatcca ttgcttgcgc ttctttcgga tacgggagtt cggctatttc
    11341 tgtacagcag gggtctgacg cttgcgttct tccctgactt tggcaaccaa ttctttaatc
    11401 gtatgaacgc cgccgtcaaa gccattattg aagataacgc ggtattttcc gccgacaata
    11461 acggtcggcg tgctgtcaat accatattgt tccgtcagtt tctgcatttt taatgcggcg
    11521 gcggcagctt cgggggaatc ataggcgcgc atcagttttt tgccgtcaaa gcctttttga
    11581 gacaaagccc attttccggc aacagccctg ttttccaagc ggattttttg ttcgtaaact
    11641 gctttaaaca cagcagggtt tgcctgatat ttcaaacccg acaaattgac ggcagccgcc
    11701 atcctggcca gaccgagcat ttcaggctgc cagaccacgt gctccgtcct caaataggca
    11761 tcagacggca atgccttgcc caatttcaat aacaaaggat cgaaatgatg gcaatgtacg
    11821 cagaaatagc cgaaaaattc caaaacctca attttacccg actgttcttg aggaatgggt
    11881 ttatccaaca caagatagtc ttccccttcc gtcagggcat atgcctgcgc ggacaacact
    11941 gccgacagca gcagcggcaa cagatgtttg agcttcataa ttatttgctt tcgatagaac
    12001 ggatcaggct ggcgacttca tgttttttca actcgtcctg catttttttc accgcatcgg
    12061 cagacatatt gccgctttgc acccggtaaa gcgttttatg tcccgcctga taaccgacca
    12121 ccttggaaga tatgcccaag attgccagtt tgacacgctg cccttccgcg ctccggcggt
    12181 cggcatacgc gcccatttgc agataatgcg ttgcttccgc cttgtcggac gttttcattt
    12241 tctgcacttc tttggcggcg gcactgcgcg ctttttcgat gctgccgctg ttgaggattt
    12301 gttccggggt cggtttgggt gcaacttttt ccttttccgc ctttttctct tcttttggag
    12361 cttttttctc tgtttcttta gacggtttta ccgcttgttt tttaaccgtt tcggcatctt
    12421 tcttctgcgc tttttccctg acggtttgtt cacgctcttc cgtcagcact ttcttacgca
    12481 ctgcctgtcc gtccggctct tcccgttccg gctcgcccgc cttttcttca acctcgtcgg
    12541 ctttatcggc agctttttcc gcatccgact gctctgcctc tgtcgcagca tccggttcgg
    12601 acaaggcgtt ttgatcggcc ggttcaggtt ggatgtcttc cttaggctgg tttttcggtt
    12661 tcaggatttc cgtttctgca ggctgcttcg acggaaccgg gattttgaac gcattttgac
    12721 cgctctggtt cagataaaac aaaataccgg caataatgac cgtcgccagt atcaaaccga
    12781 agaaaaaacc ggacagacct tttccggatt gggaaaattt gttcataaac ataccttaat
    12841 gtgtttcaga cggcattaac gccgtttgct tacgggcgga tattctaaca atatcgccat
    12901 atttgggcaa aacctgcttc cattcccgtt cctataaagc gcgacggaaa cctatggctt
    12961 tcatgacgtg gcttctgccg acttcttcgt cgcccgccaa atccgccaat gtacgcgcca
    13021 cgcgcataat gcggtggaag ctgcgggcgg aaagggagag tttttccagc aggccgccca
    13081 atgcttcctg cgcttctttt tgaatgcggg cggatgtgtc gagttcactg acactcaagg
    13141 cggcattcac tttgccttgc cgtgcgtatt gtttgtcgcg ggcggcgata acgcgttcca
    13201 aaacggacac gctgctttca cccgcttcct gctgcatcag ttcggcggcg gacaggctgg
    13261 ggacttcgat ggtcaaatcg atgcggtcga gcagcgggcc ggaaattttg ctgcggtaac
    13321 gcgcgacgct ttcgggcgtg cagcggcagg gtttgacggg atgcccgaga tagccgcacg
    13381 ggcaggggtt catggcggcg acaagttgga atttggcggg atagacggct tggcgcgccg
    13441 ctcgggaaat gtggatttcg ccgttttcca acggttcgcg caaaacttcc aaaactttgc
    13501 ggtcgaactc gggcaattca tccaaaaata aaacgccgtg atgcgccaat gaaatttcgc
    13561 ccggacgcgg atccgaaccg ccgccgacca tagccgccgc gctggcgctg tgatgcggac
    13621 tgcggaaagg acggttgctg tcgagttgtt gctggtggtt gggcaggagc gaacgcaatg
    13681 cccaaacttc taccaattcg tcttcggtca gcggcggcag gatgccgggc agccgttggg
    13741 agagcataga cttgcccgtt cccggcggac ccatcatcaa aaggctgtgt ccgcctgcgg
    13801 cagcgatttc caaagcaagg cgggcagtgt gctgaccctt gacatcgacg aggtcgagca
    13861 atttggtgtt ttcagacggc atctgaggaa cttgacagtc ggtttgcacc aaaggttcga
    13921 taccgttcaa atgggcggcg acttcgccca aagagcgcgc gccgtaaacg gtaatgccgc
    13981 gcatcacggc ggcttgtcct gcgttttctt caggcaaaac aaatgcacgt tttgcctgca
    14041 taccctgcca cgccatcgcc aacgcgccac gcacggggcg caacagcccc gacagtgcca
    14101 attcccccgc aaactcgtat tccgccagtt tttcgggtgc aacctgcccc gatgcggcaa
    14161 ggatgccaat tgcaatcggc aaatcgaaac gccccgactc tttgggcagg tcggcggggg
    14221 cgaggttgac ggtaattttt ttggcgggga attcaaaacc gctttgaata atggcggcac
    14281 ggacgcggtc gcgactttcc tttacttccg tatcgggcag cccgacgatg ttgaaatgcg
    14341 gcaggccgtt ggcaaggtgg gcttccactt cgaccaacgg cgcattcata ccgctcaagg
    14401 cgcggctgta aaccaaggca agcgacatat ttcagacggc cttattcgcc ggcttcggtt
    14461 tgctgcctga tttcggcgac ggcttcttcg gcagcggctt cagccgcttc caatgctgcc
    14521 cgttcgggat tttgcgcggc ttcgagtttt gccaaacgcg cttccaaagc cgccagtttg
    14581 gtacgagttt tgattaaaac ctgctgctgg atgtcgaatt cttcgcgcgt aaccagatcc
    14641 atacggttga acgcgccgcc cagcatcgcc ttaatatttt tttccacatc tttggcaggg
    14701 ctgttggcga tggtttcgct gattttcgaa ccgacttctt caaaaagctg cttgccgaac
    14761 ataatctgta tccttcctga acatatcaaa ttcaatcggc tattgtataa ggaaaaatgc
    14821 cgtctgaaaa cgggcggcgg ataatcggca aaacataccg cgcctccttt gcggttgcta
    14881 aattacacct caaaacacct gccgcctgaa aacggatttc atattccgcg caacgccaga
    14941 ttacaagaca ttacaaaaca atatactgtt ttaaatgatt tttccgacgc gcatcgtttc
    15001 aaactcggct ttttaagcca ttaagtgctt tgcaaacaac agaaattggg ttatgctgaa
    15061 acggattatt tacaatttca tatagtttta ttacatatct tattgtgatt gaagataatt
    15121 tatccgaatc cccctttcgg gtatccggat tttccgttgt acttttatta gaaaaacatt
    15181 tcaggcgcaa gttgcttgca atttcaaagc ctgtaattct gaagttttag acgaggaata
    15241 gcacatgaat cccatgtaca ttacttttgc aatctatctg gttgcagtcc ttctcatcgg
    15301 gcttgccgcc tatttttcta cgcgcaattt cgacgattat attttgggcg ggcgcagcct
    15361 aggcccgttt gttaccgcga tgtcggcagg cgcgtccgat atgtccggct ggctgctgat
    15421 gggtctgccg ggcgcgattt atttgagcgg tttgaatgag gcttggattg ccatcggcct
    15481 cttggtcggc gcgtatttca actggctctt ggtggcgggc cgcctgcgcg tgcataccga
    15541 atacgccaac aatgcgctga cgctgccgga ttatttcttc caccgcttcg gcgcgggcgg
    15601 acacttgatg aaagtggttt ccgcactgat tatcctgttc ttcttcacga tttattgcgc
    15661 ctcgggcatt gtggcgggcg caaccctgtt ccaaagcctg tttgaaggta tgacttacaa
    15721 tcaggcaatg tggctgggcg cgggcgcgac catcgcctat accttcttgg gcggcttctt
    15781 ggcggtcagc tggacggata cgttgcaggc ttctttgatg attttcgcgc tgattttaac
    15841 gccggtaatg gtctatctgg gcttgggcgg cgcggaacag atgtctgccg cgattcaaag
    15901 cgtcgccgca ggcacgggca aagaatacgg cagcctgttt gccggtacga ccgtcatcgg
    15961 catcatttcc accgccgcat ggggcttggg ctatttcgga cagccgcaca ttttggcgcg
    16021 ctttatggcg gccgaaagcg cgaaatcgct ggtatccgca cgccgcatcg gcatgacttg
    16081 gatggcgttg tgccttgcgg gcgcggtggc ggtcggttat ttcggcattg cgtatttcgg
    16141 tgcaaatccc gacaaagttt cttctatgag cggcaaccac gaacgcatct tcatcgcgct
    16201 ttccaccctg ctgttcaacc cttggatcgc cggcatcatt ttgagcgcga ttttggcggc
    16261 ggtgatgtcc accctgtcct gccagctttt ggtttgctcc agcgcgatta ccgaagactt
    16321 ctacaaaggc tttttgcgta aaaacgcgca acagtcggaa ctggtatggg tcggccgcct
    16381 gatggtcttg gcgattgccg tgatttccat cctgattgct tccgatccga acagcaaagt
    16441 attgggactg gtgtcttatg cgtgggcagg tttcggtgcg gcgttcggcc cgattgtgat
    16501 tctgtccgta ttgtggaaac gcatcactgc ctacggcgcg ttgtcgggta tggttgcagg
    16561 tgccttaacc gtagtcgtat gggcggaatg gataaaaaaa ccggctcaag cagcaggcga
    16621 aagcggcttg ttgacgatgt acgaaatcgt cccgggcttt attgtttgct taatcattgc
    16681 cgtgttggtt tccctgttca acaaagaacc ttcgcgcgaa atccaaaaac gctttgaaaa
    16741 agccgacgca gattaccgcg ccgcccgata aacccctttc agacggcacg gcatcccggt
    16801 tcgtgccgtc tgaacccgtt tccgggtcaa acacaaataa accttgcctg catacaggcc
    16861 ttatttgtgt tttacccgtt tcattttcaa agaaacggaa gcacctaccc tgcccgcatt
    16921 tgaagccttg tatttcatct gcggatttat tacgatatta ccgtattcag gccgcaccga
    16981 tgccgcctgc cccccgaaaa actttggaga atccaaaaaa tgtttcattt tgcatttccg
    17041 gcacaaactg ccctgcgcca agcgataacc gatgcctacc gccgtaatga aatcgaagcc
    17101 gtacaggata tgttgcaacg tgcacagatg agcgacgaag agcgcaacgc cgcctccgag
    17161 cttgcccgcc gtttggttac ccaagtccgc gccggccgca ccaaagccgg cggcgtagat
    17221 gcgctgatgc acgagttttc actctccagc gaagaaggca tcgcgctgat gtgtctggca
    17281 gaagccctgc tgcgtatccc cgacaacgcc acgcgcgacc gcctgattgc cgacaagatt
    17341 tcagacggca actggaaaag ccatttgaac aacagccctt ccctcttcgt caacgccgcc
    17401 gcctggggcc tgctgattac cggcaaactg accgccacaa acgacagaca aatgagttcc
    17461 gcactcagcc gcctgatcag caaaggcggc gcaccgctca tccgccaagg cgtaaattac
    17521 gccatgcggc ttctgggcaa acagttcgta accggacaga ccattgaaga agccctgcaa
    17581 aacggcaaag aacgcgaaaa aatgggctac cgcttctcct tcgatatgtt gggcgaagcc
    17641 gcctacaccc aagccgatgc cgaccgctac taccgcgact atgtcgaagc catccacgcc
    17701 atcggcaaag atgcggcagg acaaggcgtt tacgaaggca acggcatttc cgtcaaactt
    17761 tccgccatcc atccgcgcta ctcgcgcgcc caacacggcc gtgtgatggg cgaactgttg
    17821 ccgcgcctga aagagctgtt ccttttgggt aaaaaatacg atatcggtat caacatcgat
    17881 gccgaagaag ccaaccgtct ggagctgtct ttggatttga tggaggcttt ggtttcagac
    17941 cctgacttgg ctggctacaa aggtatcggt ttcgttgtcc aagcctacca aaaacgttgt
    18001 ccgttcgtta tcgactacct gattgaccta gcccgccgca acaaccaaaa actgatgatc
    18061 cgcctcgtca aaggcgcgta ttgggacagc gaaatcaaat gggcgcaagt ggacggcttg
    18121 aacggctatc cgacctacac ccgcaaagtc cacaccgaca tctcctacct cgcctgcgcg
    18181 cgcaaactgc tttccgcgca agacgcggta ttcccgcaat ttgccacgca caacgcctac
    18241 actttgggcg cgatttacca aatgggcaaa ggcaaagact ttgaacacca atgcctgcac
    18301 ggcatgggcg aaaccctgta cgatcaagtc gtcggcccgc aaaacttagg ccgccgcgtg
    18361 cgcgtgtacg ccccggtcgg cacacacgaa accctgctcg cctacttggt gcgccgcctg
    18421 ttggaaaacg gcgcgaactc gtctttcgtg aatcaaatcg ttgatgaaaa catcagcatc
    18481 gaccgcctga ttaagagccc gttcgacacc atcgccgaac aaggcatcca cctgcacaac
    18541 gccctgccgc tgccgcgcga tttgtacggc aaatgccgtc tgaactcgca aggcgtggac
    18601 ttgagcaacg aaaacgtatt gcagcagctt caagaacaga tgaacaaagc cgccgcgcaa
    18661 gacttccatg ccgcatccat cgtcaacggc aaagcccgcg atgtcggcga agcgcaaccg
    18721 attaaaaacc ctgccgacca cgacgacatc gtcggcacag tcagctttgc cgatgccgcg
    18781 cttgcccaag aagcggttgg tgcagccgtt gccgcgttcc ccgaatggag tgcgacacct
    18841 gccgccgaac gcgccgcctg cctgcgccgt ttcgccgacc tgctcgaaca gcacacccca
    18901 gcactgatga tgcttgccgt gcgcgaagca ggcaaaacgc tgaacaacgc cattgccgaa
    18961 gtgcgcgaag ccgtcgattt ctgccgctac tacgcaaacg aagccgaaca taccctgcct
    19021 caagacgcaa aagccgtcgg cgcgattgtc gccatcagcc cgtggaactt cccgctcgcc
    19081 atctttaccg gcgaagtcgt ttccgcattg gcggcaggca acaccgtcat cgccaaaccc
    19141 gccgaacaaa ccagcctgat tgccggttat gccgtttccc tcatgcacga agccggcatc
    19201 ccgacttccg ccctgcaact cgtcctcggc gcaggcgacg tgggtgcggc attgaccaac
    19261 gatgcccgca tcggcggcgt gatttttacc ggctcgaccg aagtggcgcg cctgatcaac
    19321 aaagcccttg ccaaacgcgg cgacaatccc gtcctgattg ccgaaaccgg cggacaaaac
    19381 gccatgattg tcgattccac cgcacttgcc gagcaagtct gcgccgacgt attgaactcc
    19441 gccttcgaca gcgcgggaca acgctgctcc gccctgcgca ttttgtgcgt ccaagaagac
    19501 gttgccgacc gtatgctcga catgatcaaa ggcgcgatgg acgaactcgt cgtcggcaaa
    19561 ccgattcagc tcactaccga tgtcggcccc gtcatcgatg ccgaagcaca gcaaaacctg
    19621 ttgaaccaca tcaacaaaat gaaaggtgtt gccaagtcct accacgaagt caaaaccgcc
    19681 gccgatgtcg attccaaaaa atccacgttc gttcgcccca tcctgtttga attgaacaac
    19741 ctcaacgaac tgcaacgcga agtcttcggt cccgtcctgc acgtcgtccg ctaccgcgcc
    19801 gacgaactcg acaacgtcat cgaccaaatc aacagcaaag gctacgccct gacccacggc
    19861 gtacacagcc gcatcgaagg cacggtacgc cacatccgca gccgcatcga agccggcaac
    19921 gtttacgtca accgcaacat cgtcggcgca gtcgtcggcg tacagccctt cggcggacac
    19981 ggtctgtccg gcacaggccc caaagcaggc ggttcgttct acctgcaaaa actgacccgc
    20041 gccggcgaat gggttgcccc gaccctgagc caaatcggac aggcggacga agccgcactc
    20101 aaacgcctcg aagcactggt tcacaaacta ccgttcaacg ccgaagagaa aaaagccgca
    20161 gcggccgctt tgggacacgc ccgcatccgc accctgcgcc gtgccgaaac cgtccttacc
    20221 ggaccgaccg gcgagcgcaa cagcatctca tggcacgcgc ccaaacgcgt ttggatacac
    20281 ggcggcagca cggttcaagc ctttgccgca ctgaccgaac ttgccgcctc cggcatacag
    20341 gcagtggtcg aacccgacag ccccttggct tcctacaccg ccgacttgga aggtctgctg
    20401 ctggtcaacg gcaaacccga aaccgccggc atcagccacg ttgccgccct gtcgcctttg
    20461 gacagcgcac gcaaacagga acttgccgcc cacgacggcg cactcatccg catcctccct
    20521 tcggaaaacg gactcgacat cctgcaagtg tttgaagaaa tctcttgcag cgtcaacacc
    20581 acagccgccg gcggcaacgc cagcctgatg gcggtcgccg actgatttta ccgaaatccc
    20641 cgggcgcggg ccgtgaacca atgccgtctg aaaacctttc agacggca
//
LOCUS       DBBZXU010000026        19818 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.026, whole genome shotgun sequence.
ACCESSION   DBBZXU010000026 DBBZXU010000000
VERSION     DBBZXU010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19818
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.026"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(203..278)
                     /locus_tag="ACJJDE_000822"
     tRNA            complement(203..278)
                     /locus_tag="ACJJDE_000822"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(243..245),aa:Asn,seq:gtt)
     gene            complement(371..730)
                     /locus_tag="ACJJDE_000823"
     CDS             complement(371..730)
                     /locus_tag="ACJJDE_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="roadblock/LC7 domain-containing protein"
                     /protein_id="HGG7540774.1"
                     /translation="MQQLLISILEDLNNTSTDIIASAVISTDGLPMATMLPSHLNSDR
                     VGAISATLLALGSRSVQELACGELEQVMIKGKSGYILLSQAGKDAVLVLVAKETGRLG
                     LILLDAKRAARHIAEAI"
     gene            complement(753..1397)
                     /locus_tag="ACJJDE_000824"
     CDS             complement(753..1397)
                     /locus_tag="ACJJDE_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase M23"
                     /protein_id="HGG7540775.1"
                     /translation="MESTLSLQANLYPRLTPAGAFYAVSSDAPSAGKTLLHSLLKADV
                     DEMVSSEKLLTWADTADIDTALNLLYRLQKLEFLYGDENGHSDGINLSDEQLPLLMEQ
                     LSGSGKALLVDRNGLYLANANFHHEAAEELGLLAAEVAQMEKKYRLLIKNNLYINNNA
                     WGVCDPSGQSELTFFPLYIGSTKFILVIGGIPDLGKEAFVTLVRILYRRYSNRV"
     gene            complement(1399..1935)
                     /locus_tag="ACJJDE_000825"
     CDS             complement(1399..1935)
                     /locus_tag="ACJJDE_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP/GTP-binding protein"
                     /protein_id="HGG7540776.1"
                     /translation="MRENKIIFTGPVGVGKTTAIAAISDEALVQTDASASDMTLDRKR
                     NTTVAMDYGAISLDEDTKVHLYGTPGQERFNFMWEILSQGSMGLVLLLDNARTNPLKD
                     LEFFLHSFRGLLEKAPVVVGITKMDIRSQPGIDVYHKYLAKHNLNVPVFEIDARKEDD
                     VKQLVSAMLFSIDPGLEV"
     gene            complement(1947..3044)
                     /locus_tag="ACJJDE_000826"
     CDS             complement(1947..3044)
                     /locus_tag="ACJJDE_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7540777.1"
                     /translation="MEVQLPKIKTVRVMLAGMTAQQESVFKMAFKMHNTTRYETVSPS
                     DGSAVPDLVLADTDAEGGFELWKELAERYKDIPVAVCSEKVPDSEVPYLPKPIRFETL
                     FPMLRKLLQGENVYGKSFIAPADRSAKNNGNVQRTVTIRQFNPNKGLLGALRFAEKNR
                     QDIAILHGNKPVLIVFPSIQRVLLTESVQKLEELCKDENLQVSCKTVPDNPQWREKAK
                     VGIMSCMWQFSIWTAQGRLIYPISPDTPFTLKSWPNLTRLANVPGSIRLSAFLTKASV
                     NLNVLYKVMPLNLNDILNYLAATYTTGFLSVDLKTVSQQAYSDMADKINIGADSASDS
                     EMMKKAEKITTPSQSQSRGLLQRLMKKLLGS"
     gene            complement(3047..4483)
                     /locus_tag="ACJJDE_000827"
     CDS             complement(3047..4483)
                     /locus_tag="ACJJDE_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HGG7540778.1"
                     /translation="MENSLIIGLALAVLLMLLVMRAKQGKKTPKRKSQGVGNTQGQTP
                     GSNDSDWVDQIGQSVSDGTQPDWSWNESAETASAAVSAQEVDPLTEYQVYKQFGYQGK
                     AAESLAAYLDGIPDGEAKPENLIRELLDINLEVGDVDVLADNLQKYGKLIPSELLAKY
                     IEQALQRDSNHLRIRVLAEEGLGWGTQEIEKRAEGGSATAASASPPPDAGGKAYEAEE
                     IKRIPIVRGKKDVSGISQEEIGAIAGLVRADQGAKILKDKVSYETASKQYDRAIQTSE
                     KPANLIIDALKLDYQHADIDRFAGHLWKLYQTLGNYGRQVKERMLGWGYSLGYHEVFD
                     DLEKGPNDRQIKDIGMGHGYLPKNIQKFKSQHRDLVLQDSSLINTGSSPADDAVKEVE
                     SLLMYGQIEAAMDVLEQAVLKYPDESQLYITLIDIYERTEDWDRLGQFLRVLRERADR
                     LPEEVVMLMSRLLQRMNQNIKKIKRYGK"
     gene            complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACJJDE_000828"
     CDS             complement(4703..5485)
                     /gene="bioC"
                     /locus_tag="ACJJDE_000828"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010340 - carboxyl-O-methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HGG7540779.1"
                     /translation="MESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDY
                     LPDMPLENVLELGCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGD
                     AENFPFQRQFDLIASASAVQWFHQPDAFITHCKTGLKANGLLAVATFGKDNLKEVRQI
                     TNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNW
                     TRKNLNGFIGDYLSAFSMPSGKVRLTYHPLFFIARYSAEGRQ"
     gene            complement(5473..6120)
                     /locus_tag="ACJJDE_000829"
     CDS             complement(5473..6120)
                     /locus_tag="ACJJDE_000829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl esterase BioG family
                     protein"
                     /protein_id="HGG7540780.1"
                     /translation="MKTKFYNHQGGHLILYFAGWGTPPDAVNHLILPENHDLLICYDY
                     QDVNLDFDFSAYRHIRLVAWSMGVWAAERALQGIRLKSATAVNGTGLPCDDNFGIPFA
                     VFKGTLENLTEDTRLKFERRICGDKASFEDYQQFPARPFDEIHQELTSLFKMIGQDRC
                     TDLIRWTNALVGSGDKIFMPANQHRYWTPRCTVREIDGGHYLFSRFTHWSALWNH"
     gene            complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACJJDE_000830"
     CDS             complement(6130..7272)
                     /gene="bioF"
                     /locus_tag="ACJJDE_000830"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008710 - 8-amino-7-oxononanoate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HGG7540781.1"
                     /translation="MKVFKQQLEQLGAQNQYRSIPDLIHQGRYITRENRKMLNMSSND
                     YLGLASDENLRRSFLQQYGGNFPSFTSSSSRLLTGNFPIYTDLEELVAQRFQRESALL
                     FNSGYHANLGILPALTTTKSLILADKFVHASMIDGIRLSRCAFFRYRHNDYEHLKNLL
                     EKNVGKFDRTFIVTESVFSMDGDVADLKQLVQLKKQFPNTYLYVDEAHAIGVYGQNGL
                     GIAERDNLIAEIDLLVGTFGKALASVGAYAVCNQVLKECLINQMRPLIFSTALPPFNV
                     AWTYFIFERLPQFSKERSHLEQLSAFLRREVAHRTQIMPSQTCIVPYILGGNEAALAK
                     AEYLQRQGYYCLPIRPPTVPKNTSRIRLSLTADMTTDEVRQFAACL"
     gene            7495..8571
                     /locus_tag="ACJJDE_000831"
     CDS             7495..8571
                     /locus_tag="ACJJDE_000831"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HGG7540782.1"
                     /translation="MICRKPIGHKPYFDMNKTICRTAALLISGFSYANTVIPDVSPVA
                     QGQHVFINIPQQRLFLYTDGKLTKVYPVAVGRAMTQTNLGEHKIGAKAYNPVWYIPKS
                     IQKERGDGVKTIAAGPDNPLGPVFVRLGDPKLGLGIHGTNAPASVPGVRSHGCVRMKS
                     PDALEFAKTIASGSPASVIYQMAGLNEDADRNLWLAAFRDPYGKNNLDIASLKKSIAQ
                     WAKTQGKTIAPEKVDAVLKDRTGSAVCLTCGKNGKMKMPLKSLAWIQGSSSYSQAEVI
                     EQTEETNSAEISETRTPEVPDVHTPEAQPHLNTQSDGTPTAYTEPAADSSPQVETPDQ
                     AASEPVDVLFSIDVIRQGNLRLGN"
     gene            complement(8778..10244)
                     /locus_tag="ACJJDE_000832"
     CDS             complement(8778..10244)
                     /locus_tag="ACJJDE_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008509 - monoatomic anion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006820 - monoatomic anion transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DASS family sodium-coupled anion symporter"
                     /protein_id="HGG7540783.1"
                     /translation="MMKLGFKPIPLAIAAVLCALVLALPVPDGVKPQAWTLLAMFIGV
                     IAAIIGKAMPLGALSIIAVGLVAVTGVTADKPGAAMSDALSAFANPLIWLIAIAVMIS
                     RGLLKTGLGMRIGYLFIAVFGRKTLGIGYSLALSELLLAPVTPSNTARGGGIIHPIMQ
                     SIAGSYGSNPAKGTEGKMGKYLALVNYHSNPISSAMFITATAPNPLIVNLIAENLGSS
                     FRLSWGAWAWAMAVPGVIAFFVMPLILYFLYPPEIKETPNAVQFAKDRLREMGKMSAD
                     EIIMAVIFGILLLLWADVPALITGNHAFSINATATAFIGLSLLLLSGVLTWDDVLKEK
                     SAWDTIIWFGALIMMAAFLNKLGLIKWFSGVLAESVGGLGVSGTAAGVILVLAYMYAH
                     YMFASTTAHITAMFGAFFAAAVSLNAPAMPTALMMAAASNIMMTLTHYATGTSPVIFG
                     SGYTTMGEWWKAGFIMSVVNFLIFFVIGSIWWKVLGYW"
     gene            complement(10442..11365)
                     /gene="speB"
                     /locus_tag="ACJJDE_000833"
     CDS             complement(10442..11365)
                     /gene="speB"
                     /locus_tag="ACJJDE_000833"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HGG7540784.1"
                     /translation="MQYSTLAGQTDNSLVSNNFGFLRLPLNFMPYESHADWVITGVPY
                     DMAVSGRSGARFGPEAIRRASVNLAWEHRRFPWTFDVRERLNIIDCGDLVFSFGDSRD
                     FVEKMEAHAGKLLSSGKRCLSLGGDHFITLPLLRAHARYFGKLALIHFDAHTDTYDNG
                     SEYDHGTMFYTAPKEGLIDPSRSVQIGIRTEHSKKLPFTVLTAPQVNEDSVEETVRKI
                     KETVGNMPVYLTFDIDCLDPSFAPGTGTPVCGGLSSDRALKILRGLTDLDIVGMDVVE
                     VAPSYDQSDITALAGATIALEMLYLQGAKKD"
     gene            complement(11464..13356)
                     /gene="speA"
                     /locus_tag="ACJJDE_000834"
     CDS             complement(11464..13356)
                     /gene="speA"
                     /locus_tag="ACJJDE_000834"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008792 - arginine decarboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006527 - arginine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HGG7540785.1"
                     /translation="MPILTIREVCNINHWGIGYYDVDDSGEIIVRPNPSQHNQTVSLQ
                     KLTEAVQQKHQARLPVLFCFPQILEHRLRDINRAFQTAREECGYKGGYCLVYPIKVNQ
                     HRRVIESLMSSGQPHGLEAGSKAELMAVLAHAGTRQTLIVCNGYKDREYIRFALMGEK
                     LGHQVYLVIEKLSEIQMVLEEAEKLGIKPRLGVRARLASQGSGKWQSSGGEKSKFGLS
                     ASQVLQLVDILKQKNRLDCLQLLHFHLGSQLGNIRDVATGVHESARFYVELHKLGVNI
                     RCFDVGGGLGVDYEGNRTQSDCSVNYSLNEYAATVVWGISQACLEHGLPHPTIITESG
                     RGITAHHAVLVANVIGVERYKPRRLDAPSPEAPRVLHSMWETWTDISASREKRSLRSW
                     IHEGQFDLADVHNQYNVGLLSLAQRAWAEQLYLNICHEVGELFNEKHRSHRTIIDELQ
                     ERFADKLYVNFSLFQSLPDAWGIDQLFPVCPITGLNEPIARRAVLLDITCDSDGTIDH
                     YIDGDGIAGTMPMPDYPEEEPPLLGFFMVGAYQEILGNMHNLFGDTATADVVVGEDGQ
                     FTVIDYDEGNTVADMLEYVYQDPKELMKRYREQIEHSDLPASQAMSFLKELEAGLNGY
                     TYLEDE"
     gene            complement(13523..13807)
                     /locus_tag="ACJJDE_000835"
     CDS             complement(13523..13807)
                     /locus_tag="ACJJDE_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HGG7540786.1"
                     /translation="MKKLLLVAVVSLSAAAAFAGDSAERQIYGDPHFEQNRTKAVKML
                     EQRGYQVHDVDADDHWGKPVLEVEAYKDGREYDIVLSYPDLKIIKEQLDR"
     gene            complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="ACJJDE_000836"
     CDS             complement(13958..15766)
                     /gene="aspS"
                     /locus_tag="ACJJDE_000836"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HGG7540787.1"
                     /translation="MRTNYCGLISEQYLDQTVTVKGWVHRRRDHGGVIFIDLRDREGI
                     VQVVIDPDTPEAFAAADSSRNEYVLSITGRVRNRPEGTTNDKMISGKIEILAKEIEVL
                     NAAATPPFQIDDENISENVRLTNRVIDLRRPVMQRNLRLRYQVAMGVRRYLDAQGFID
                     IETPMLTRSTPEGARDYLVPSRVHPGEFFALPQSPQLFKQLLMVAGFDRYYQITKCFR
                     DEDLRADRQPEFTQIDLETSFLNEDEIMDITEGMAKQVFKDALGVDLGDFPRMPYSEA
                     MFYYGSDKPDMRINLKFTELTDLMKTEEFKVFRGAADMKGGRVVALRVPNGTKFSRKE
                     IDEYTKFVGIYGAKGLAYIKVNDVGNLSNGEDSGLQSPIVKFLSENALKEIIARTGAQ
                     NGDIIFFGADKTKVVNEAIGALRIKVGLEHGKDNGYFTDEWKPLWVVDFPMFEYDEEA
                     DRYVAVHHPFTAPKEGHEDLMVSDPANCLARAYDMVLNGWEIGGGSIRIHRADVQEKV
                     FAALKISPEEQQEKFGFLLDNLKFGAPPHGGLAFGLDRLVTLMTGAESIRDVIAFPKT
                     QRAQCLLTNAPNSVDDKQLRELSLRLRQKAAETKEA"
     gene            complement(15824..16525)
                     /locus_tag="ACJJDE_000837"
     CDS             complement(15824..16525)
                     /locus_tag="ACJJDE_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HGG7540788.1"
                     /translation="MTEPAAEGGKAAKALKKYLITGILVWLPIAVTVWVVSYIVSASD
                     QLVNLLPKQWRPQYVLGFNIPGLGVIVAIAVLFVTGLFAANVLGRQILAAWDSLLGRI
                     PVVKSIYSSVKKVSESLLSDSSRSFKTPVLVPFPQSGIWTIAFVSGQVSNAVKAALPK
                     DGDYLSVYVPTTPNPTGGYYIMVKKSDVRELDMSVDEALKYVISLGMVIPDDLPVKTL
                     AGPMPSEKADLPEQQ"
     gene            complement(16668..17816)
                     /locus_tag="ACJJDE_000838"
     CDS             complement(16668..17816)
                     /locus_tag="ACJJDE_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HGG7540789.1"
                     /translation="MPTMGAEMNTRNMRYILLTGLLPMASAFGETALQCAALTDNVTR
                     LACYDRIFAAQLPSSAGQEGQESKAVLNLTETVRSSLDKGEAVIVVEKGGDALPADSA
                     GETADIYTPLSLMYDLDKNDLRGLLGVREHNPMYLMPLWYNNSPNYAPSSPTRGTTVQ
                     EKFGQQKRAETKLQVSFKSKIAEDLFKTRADLWFGYTQRSDWQIYNQGRKSAPFRNTD
                     YKPEIFLTQPVKADLPFGGRLRMLGAGFVHQSNGQSRPESRSWNRIYAMAGMEWGKLT
                     VIPRVWVRAFDQSGDKNDNPDIADYMGYGDVKLQYRLNDRQNVYSVLRYNPKTGYGAI
                     EAAYTFPIKGKLKGVVRGFHGYGESLIDYNHKQNGIGIGLMFNDLDGI"
     gene            complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="ACJJDE_000839"
     CDS             complement(17976..18239)
                     /gene="rpsT"
                     /locus_tag="ACJJDE_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HGG7540790.1"
                     /translation="MANSAQARKRARQSVKQRAHNASLRTAFRTAVKKVLKAVEAGDK
                     AAAQAVYQESVKVIDRIADKGVFHKNKAARHKSRLSAKVKALA"
     gene            18542..19684
                     /locus_tag="ACJJDE_000840"
     CDS             18542..19684
                     /locus_tag="ACJJDE_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HGG7540791.1"
                     /translation="MKKSVLAVLAALSLAACGGSEKNAVQPQADAASAANAEAAATDT
                     LNIYNWSNYVDESTVEDFKKANNLKLTYDLYENNETLEAKMLTGKSGYDLVVPGIAFL
                     PRQIEAGAYQKVNKDLIPNYKNIDPELLKMLETADPGNQYAVPYFSGVNTIAITAKGK
                     ELLGGKLPENGWDLLFKPEYTHKLKSCGIALWDTPSEMFPILLNYLGKDPKGSNPEDL
                     KAAAEVLKSIRPDVKRFSPSIIDELARGDICLAAGNGGDLNLAKARSEEVKNNVGIEV
                     LNPKGMGFWIESWLIPADAKNVANAHKYINYTLDPEIAAKNGIAVTFAPASKPAREKM
                     PAELVNTRSIFPNEQDMKDGFVMPQMSTDAKKLSVSLWQKIKVGTN"
BASE COUNT         5106 a         5114 c         4610 g         4988 t
ORIGIN      
        1 caatgccgta ctggtttttg ttaatccact ataaaatcga gtttatccta gttgtccagg
       61 acagccccta ttttttcata accatcacga aaggaatttt gcaaagattt tattccatct
      121 caaaacaatc atctcaaaaa tgcgtttctg accgccggta aaacaaaacc ctctaagaaa
      181 atacttagag ggttttgaaa tttggctccc cgacctgggc tcgaaccagg gacctgcgga
      241 ttaacagtcc gtcgctctac cgactgagct atcggggaat aagcgcgaat aataaaacag
      301 aaataccgaa cgtgtcaata taaattgaca atcgattgca ctttatctgc aagcccgcaa
      361 tctttatatg ttatatggct tccgcaatat gccttgccgc acgtttggca tccaatagga
      421 ttaaaccaag tctgccggtt tcttttgcca ccagcaccaa cacggcatct ttacccgcct
      481 gacttaaaag gatatagcct gattttcctt taatcatcac ttgttccaat tccccgcagg
      541 cgagttcctg caccgagcga ctccccaaag caagcaaagt ggcagaaatc gcccctaccc
      601 tgtccgaatt caaatgtgaa ggaagcattg tcgccatcgg caatccgtcg gttgagataa
      661 cggcagacgc gataatatcc gtagatgtat tgtttaaatc ttcaaggatt gaaatcaata
      721 attgctgcat aacccctcct ctctcccaag ttttacacgc ggttgctgta acggcggtat
      781 aaaatcctta ccaaagtaac aaatgcctct ttgcccaaat cgggaatgcc gccgataacc
      841 aaaataaatt tggttgaacc gatatacaat gggaaaaatg tcaattcgct ctgaccggaa
      901 ggatcgcaaa cgccccaagc gttattgttg atatacaggt tgttcttaat cagcagccgg
      961 tatttctttt ccatctgtgc gacttctgcc gccaacaacc ccaactcttc cgccgcctca
     1021 tgatggaaat tggcgttggc aagatacaga ccgttccgat cgaccaataa cgccttaccg
     1081 ctgccggaca attgttccat cagcaacggc aattgctcgt ccgacaaatt gatgccgtct
     1141 gaatgaccgt tttcatcgcc atagaggaat tcgagttttt gcaaacggta caacaggttc
     1201 aaagcggtat cgatgtcggc ggtgtccgcc caggtaagca gcttctcact gctgaccatt
     1261 tcgtccacat ccgctttcaa caggctgtgc aacaaagttt taccggcact gggggcatcg
     1321 ctggatacgg cataaaatgc accggcagga gtcaggcggg gatataaatt tgcttgtagt
     1381 gaaagtgttg attccatatt aaacctccag tcccggatca atagaaaata acattgcgct
     1441 aaccaattgt tttacgtcat cttccttacg ggcatcaatt tcaaaaaccg gaacattaag
     1501 attatgtttt gcaagatatt tgtgatacac gtcgataccg ggctgagagc gtatatccat
     1561 cttggtaata ccgacaacga cgggtgcctt ctccagcagc cctcgaaacg aatgtaaaaa
     1621 gaattccaaa tctttcaacg gattggttcg ggcattatct aaaagcaaga ccaaacccat
     1681 actgccttgg cttaagattt cccacataaa gttgaaccgt tcctgaccgg gcgtaccata
     1741 taaatggact ttggtatcct catccaagct gatggccccg tagtccatcg ccactgtcgt
     1801 attccttttc ctatccaaag tcatatcgga tgcggaagca tcggtctgaa cgagtgcttc
     1861 gtccgaaata gccgcaatgg cagtggtttt ccctacgccg acaggtcctg tgaaaataat
     1921 tttattttct ctcatctctc cgcctcttag ctgcccaaca gttttttcat cagcctttgc
     1981 agaagaccgc gcgactggga ttgggatggt gttgtgattt tttccgcttt tttcatcatt
     2041 tcactatcag aggcagaatc ggctccgata tttattttat ccgccatatc ggagtatgcc
     2101 tgttgtgaaa ccgtttttaa atctaccgac aaaaacccgg ttgtataggt tgccgcaaga
     2161 taattcagaa tatcattgag gtttaaaggc atcactttat acaacacgtt aaggttgacg
     2221 gatgccttgg tcagaaatgc cgacaagcgt atcgaccccg gcacatttgc caaccgggtc
     2281 aggtttggcc aagatttcaa cgtaaacgga gtatcgggag aaatcggata aatcaacctg
     2341 ccctgcgccg tccaaatgga aaactgccac atacaggaca taatgcctac tttagccttt
     2401 tcgcgccatt gcgggttatc gggaacagtc ttgcagctga cctgcaaatt ttcgtctttg
     2461 cacaattctt cgagtttttg cacactttct gtcagcaaaa cccgttgtat cgaggggaaa
     2521 acaataagga ccggcttatt tccatgcaag atagcgatgt cctgcctgtt cttttccgca
     2581 aaccgcaacg cccccaataa tcctttattc gggttaaact ggcgtatcgt aaccgtacgc
     2641 tgcacattcc cgttattttt cgccgaccgg tctgcgggtg caataaacga tttcccataa
     2701 acattctcgc cctgcaacaa tttgcggagc ataggaaaca atgtttcaaa ccgaatcggt
     2761 ttgggcaggt agggaacttc agaatcggga actttctccg aacagacggc gacgggtata
     2821 tccttataac gctcggcaag ctctttccaa agttcaaaac cgccctcggc atcggtatcc
     2881 gccaaaacca aatcgggcac ggcactgccg tctgaagggg atactgtttc ataacgggtg
     2941 gtattgtgca ttttgaatgc cattttgaaa acggattcct gctgcgccgt catccccgcc
     3001 aacattacgc gtactgtttt aattttcggc agttgaactt ccatttttat tttccgtacc
     3061 gttttatttt tttaatattt tgattcatac gctgcagcag ccggctcatc agcataacga
     3121 cctcttcagg aagcctgtcc gcacgttccc tcaataccct taaaaactgc cccaacctat
     3181 cccaatcttc agtacgttca taaatatcga tcaacgtaat ataaagctgg gactcgtcgg
     3241 gatatttcaa taccgcctgc tccaacacat ccattgccgc ttcaatctga ccatacatca
     3301 gcaacgactc tacttcctta accgcatcgt ctgccggaga cgaaccggtg ttgatcaacg
     3361 aagaatcttg aagcaccaaa tcccgatgtt gcgatttgaa tttctgtata tttttcggca
     3421 gatacccgtg ccccataccg atgtctttga tttgccggtc gttcggccct ttttccaaat
     3481 catcgaaaac ttcatggtaa cccaagctgt acccccaccc cagcatccgc tctttaacct
     3541 gcctgccgta gttacccaac gtttggtaaa gtttccacaa atgtccggca aaacggtcta
     3601 tgtccgcgtg ttggtaatcg agtttcaacg catcgataat caggtttgca ggtttttcgg
     3661 aagtttggat ggcacggtcg tattgtttcg atgccgtttc atagctgact ttgtctttaa
     3721 ggattttcgc accttgatcg gcgcgaacca aaccggcaat cgcaccgatt tcctcttgac
     3781 tgattccgga cacgtctttt ttgccccgca caatcgggat gcgcttgatt tcttcggctt
     3841 cataagcctt accgccggca tccggcgggg gcgatgcgga agctgccgtc gcagaaccgc
     3901 cttccgcacg tttttcaatc tcctgagtgc cccatcccaa accttcttcc gccaagacac
     3961 ggatacgcaa atggtttgaa tcgcgctgta atgcctgttc gatatatttt gccaaaagtt
     4021 cggaaggaat cagtttgccg tatttttgca gattgtctgc caaaacatcg acatccccca
     4081 cttcgagatt gatatcgagc agctcgcgga taaggttttc aggtttcgct tcaccatccg
     4141 gaatgccgtc cagataggca gccaaagatt cggcagcctt gccctgataa ccgaattgct
     4201 tataaacctg atactccgta agcggatcga cttcttgcgc ggatacggcg gcggatgcgg
     4261 tctcggcact ttcgttccaa gaccagtcgg gttgcgtgcc gtctgaaacc gattgtccaa
     4321 tctgatcgac ccagtccgaa tcattgcttc cgggtgtctg cccctgcgta ttgccgacac
     4381 cttgggattt gcgcttcggt gttttcttac cctgcttcgc acgcataacc aaaagcatca
     4441 gcaataccgc cagtgccaaa ccgataatta atgagttttc caaaggatac tcccgatacc
     4501 gtaacgagcg gatagctgac cgcctgcaac ggccattgtc cgcttttatt attaacgatt
     4561 tactgaaata gacttgtaag ttttaaatca taccataatt taacgtttaa caatatgcct
     4621 tctgcacaag cctcgccata ttacctttta cccacatcag tatcaatacc cgatataaaa
     4681 ataactttgc ccataagctg ccttattgcc tgccctccgc agagtagcgc gcgataaaaa
     4741 ataacggatg ataagtcagg cgcactttgc ccgacggcat actgaacgcc gacaagtaat
     4801 cgccaataaa tccattgaga ttttttcttg tccaattttt ttggttcgtg gcggtaacgc
     4861 ctgtatattt aaggtgtttg agtacatcta acggcgtatc aaagtctagt attaccttaa
     4921 aatcctcaca ccataaaagc tcaaaatctt tggctaacca agtctgccat tgggataaag
     4981 tcgggtaatt taagcctata tttgtaattt ggcggacttc ttttaaattg tctttgccaa
     5041 aggttgcaac cgccaataat ccgtttgctt tcaagcctgt tttgcaatgg gtgataaaag
     5101 cgtcgggttg atgaaaccat tgcacggcag atgcgcttgc gattaagtca aattgtcgtt
     5161 gaaaaggaaa gttttccgca tcgccgcaat aaaaatcaaa ggattgcggc agtttttcag
     5221 ccagttgggg ctgcacatcg cacaaatcat taaataacca ataattcgct gaaatctgtt
     5281 tttgcagcaa ggcactcaac attcctgagc cacagcccaa ttccaacacg ttttccaatg
     5341 gcatatccgg caaataatct tgcaaatgcg ccattaaatt aatcgtcatt ttttgttgga
     5401 ttaaggcgtg ccggtcataa tcgtttaatg ctttttggaa agcctgccga atgcgcgatt
     5461 tatttatggc agtcagtgat tccatagtgc cgaccaatgg gtgaatcttg aaaacaggta
     5521 atgtccgccg tcaatttccc gaacggtgca acgcggtgtc caatatcggt gctgattggc
     5581 aggcataaaa attttatcgc ccgatccgac caaggcattt gtccagcgga taagatctgt
     5641 acacctatct tgcccgatca tcttaaaaag tgaggtaagt tcttgatgaa tttcgtcaaa
     5701 cgggcgggcg ggaaattgtt ggtaatcttc aaaagatgct ttatcgccac agattctgcg
     5761 ttcaaatttt aaacgggtat cttccgtgag gttttccaat gtgcctttaa aaacggcgaa
     5821 agggataccg aaattatcat cgcaaggcaa acctgtgcca ttcactgccg ttgcggattt
     5881 taatcttatt ccttgcaatg ccctctctgc cgcccaaacg cccattgacc acgccaccaa
     5941 acggatgtgc cgataggcgg aaaaatcaaa atccaaattt acatcttgat aatcatagca
     6001 aatcaataaa tcgtgatttt ccggcaaaat caaatgattt acagcatcgg gcggcgttcc
     6061 ccaacctgca aaatacagga ttaaatgtcc gccttgatga ttgtaaaatt ttgttttcat
     6121 atcatatcct tacaggcacg ccgcaaactg ccgcacttca tccgttgtca tatctgccgt
     6181 taaagacagg cggattctgg atgtgttttt gggtactgtc ggcggtctga tgggcaggca
     6241 ataataaccc tgcctttgca ggtattccgc tttggcaagg gcggcttcat tcccgcctaa
     6301 aatatagggg acgatgcagg tttggctcgg cattatttgc gtccgatgcg ccacttcccg
     6361 ccgtaaaaat gcacttaact gctcaagatg gcttctttct tttgagaatt gcggcaatcg
     6421 ttcaaaaata aaataagtcc aagccacatt aaacggcggc aatgcggttg aaaaaatcaa
     6481 tgggcgcatt tgattaatca aacattcttt caatacttgg ttgcagacgg catacgcccc
     6541 caccgaggct aaggctttac cgaaagtgcc gaccaataaa tcaatctcgg caatcagatt
     6601 atcccgttcg gcaatcccca atccgttttg cccataaaca ccgattgcgt gggcttcatc
     6661 cacataaaga taagtattgg gaaactgttt ttttaattgg acaagctgtt tcaaatccgc
     6721 cacatcgccg tccatactga aaacagattc ggtaacgata aaagtgcggt caaattttcc
     6781 gacgtttttt tcaagcagat ttttcaaatg ttcataatca ttatgacgat aacggaaaaa
     6841 cgcacaccgg ctcaaacgga tgccgtcaat catactggcg tgaacaaatt tatctgccaa
     6901 aatcaaactt ttcgtcgtcg tcaaagcagg caaaataccg agattggcgt gatagccgct
     6961 gttgaacaat aacgcgcttt cccgttggaa acgttgtgcg acaagctctt ccaaatcggt
     7021 ataaatagga aagttgcccg ttaataaacg cgatgaagaa ctggtaaaag agggaaaatt
     7081 accgccgtat tgctgcaaaa aagaccggcg caagttttca tctgatgcca aacccaaata
     7141 atcattagac gacatattca gcattttgcg gttttcccgc gtaatatacc gcccttgatg
     7201 aatcaaatcc ggaatcgaac gatattggtt ttgcgcgccg agttgttcaa gctgttgttt
     7261 aaaaaccttc attatgatgt aaatattcct gagttaaagc ctgaaccaac ccagcatcaa
     7321 acaatcaagt aatgcccttt taataaaaac cgttttgccg ccgacctttg ccacacccct
     7381 gccttcataa tccaaggcgg aaatttccgc gacatttgtt tccgttgcca ttacccaatc
     7441 cgtccgcact gtaccgaagc gcatattttc gcacaaattg gtacggtttc aggtatgatt
     7501 tgccgaaaac ctatcggaca caaaccatat tttgatatga ataaaacaat ctgccgcact
     7561 gctgcactat tgataagcgg tttttcatac gcaaacaccg tcattcccga tgtctccccc
     7621 gtcgcacaag gtcaacatgt cttcattaac atccctcagc aacgcctgtt cctctacacc
     7681 gacggcaaac tgaccaaggt ttatcccgtt gcagtaggtc gggcgatgac gcaaaccaat
     7741 ctaggcgaac ataaaatcgg tgcgaaagcc tataaccctg tttggtacat ccccaaatcc
     7801 atacagaaag aacgcggcga cggcgtaaaa accatagccg ccggcccgga caaccctttg
     7861 gggccggttt ttgtccgctt aggcgaccct aaactcggtt tgggcataca cgggaccaat
     7921 gcgccggcca gcgtccccgg ggttcggagt cacggctgcg tccgcatgaa atcgcccgac
     7981 gcgctcgagt ttgccaaaac catcgccagc ggctcgcccg cctccgtcat ctatcaaatg
     8041 gcgggtctca atgaagatgc ggatcgcaac ctgtggcttg ccgccttccg cgacccttac
     8101 ggtaagaaca accttgacat cgcctctctg aaaaaaagta ttgcgcaatg ggcaaaaaca
     8161 cagggtaaaa ccatcgcgcc cgagaaagtc gatgctgtac tcaaagaccg caccggatcg
     8221 gccgtctgcc tgacctgcgg caaaaacggc aagatgaaga tgccgctcaa atcgctggcg
     8281 tggatacagg gttcttcctc atacagccaa gctgaagtca ttgaacaaac tgaggaaacc
     8341 aactctgccg aaatatccga gacacgcacg cccgaagtgc ctgatgtaca cacgcccgag
     8401 gcacaaccgc atttaaatac ccaatccgac ggcacgccga ctgcctatac cgaaccggct
     8461 gccgattcat cgccgcaagt agaaacacct gatcaggctg cttccgagcc ggttgatgta
     8521 ttattttcaa tagatgtgat acggcaggga aatttgcgtt taggtaattg aataaccttc
     8581 tgattattta atgcttatgt ttatcagaag ttgataggcg gtttggtttt tgtttggctt
     8641 ttcctacacc gccgcctgcc gctttctgca acattcaagc gcacaaatat gccatctgaa
     8701 ggctttagac ggcatatttc acgataatag tcgcccaatc aaataaacac agattggaaa
     8761 tttattttat ttttccctta ccaatacccc agaactttcc accaaatgct gccgataacg
     8821 aaaaaaatca gaaaattgac cacgctcatg ataaaacccg ccttccacca ttctcccatt
     8881 gtggtgtagc ccgaaccgaa aatcacaggc gaagtaccgg tcgcataatg agtgagggtc
     8941 atcataatgt tggatgcggc cgccatcatc agcgcggtcg gcatcgccgg ggcattcagt
     9001 gaaacggcag cagcgaaaaa tgcgccgaac atagcggtaa tatgtgcagt agtactggca
     9061 aacatataat gcgcatacat ataagcaagc acgaggatta cgcccgcagc cgtgccgcta
     9121 acgcccaaac cgccgacact ttccgccaac actccggaga accatttaat cagtccgagt
     9181 ttatttaaaa atgcagccat cataatcaat gcgccaaacc aaataatcgt atcccacgcg
     9241 cttttttctt tcaaaacatc gtcccaagtc aatacaccgg aaagcaaaag caggcttaat
     9301 ccgataaatg cggtggcggt ggcgttgata ctaaaagcgt gattgccggt aataagggcg
     9361 ggaacatctg cccacaacag caacaagata ccgaaaatga ccgccataat gatttcgtct
     9421 gccgacattt tacccatctc cctcagacgg tctttggcaa attgaacggc attgggcgtt
     9481 tctttaattt caggcggata caaaaaatat aaaatcaaag gcataacgaa aaaggcgata
     9541 acgccgggaa cagccattgc ccacgcccac gccccccaag aaagacggaa actactgcct
     9601 aaattttcgg caatcaagtt gacgattaaa gggttggggg cagttgcagt aataaacata
     9661 gccgacgaaa tgggattgga atgatagttg accaaagcca aatatttacc catcttgcct
     9721 tctgtgcctt ttgcgggatt ggagccgtaa ctgccggcaa tcgactgcat aatcggatgt
     9781 ataatgccgc cgccgcgcgc ggtattggaa ggggtaacgg gagccagcag cagttcggaa
     9841 agagcgagac tgtaaccgat gcccagcgtt tttcttccaa aaacggcgat aaacaaatat
     9901 ccgatacgca tccccagccc tgttttgagc aaaccgcgcg aaatcataac tgcgatggca
     9961 atcagccaaa tcaacggatt ggcgaacgca ctcaacgcat cgctcatcgc cgcacccggt
    10021 ttgtcggcgg ttacgccggt tactgcgacc aacccgacgg caataatcga cagcgcaccc
    10081 aacggcatgg ccttgccgat aatggcggca atcacaccga taaacatggc cagcagcgtc
    10141 caagcctgag gcttgacccc gtcgggtacg ggcagtgcca aaaccaaggc gcacaatact
    10201 gcggcaatgg cgaggggtat cggtttgaaa cccaatttca tcatattgac ctccgtaaaa
    10261 aagaccgtcc cgaaaaatcg gaaaaataat atttaactaa ttgttttata atatatattc
    10321 cgatatttca ccgtctttcc gatatgcggc tccgggcaac ttttgtttca gtatttgaat
    10381 tttcattaga ctgaatacgc cgtttgaacg gcacggcgaa aacccggggg atgccggacg
    10441 ttcagtcctt tttcgcacct tgaaggtaaa gcatttccaa ggcaattgtg gcaccggcca
    10501 aagcggtaat gtcggattgg tcgtaagagg gggcaacttc tacaacatcc ataccgacga
    10561 tgtcgagatc cgtcagccca cgtaggattt ttaatgccct gtcgctgctc aagccgccgc
    10621 atacgggcgt accggtccca ggggcgaacg acgggtccag gcagtcgatg tcgaaagtca
    10681 ggtaaacggg catattgccg acggtttctt tgattttacg gacggtctct tcaacactgt
    10741 cttcattgac ttggggggcg gtcaacacag taaaaggcaa ttttttactg tgttcggtac
    10801 gtatgccgat ttgtacggaa cgggacgggt cgatgaggcc ttccttgggg gcggtataga
    10861 acatcgtacc gtggtcgtat tcgctgccgt tgtcgtaggt gtcggtgtgc gcgtcaaaat
    10921 gaatcagtgc gagtttgccg aaatagcggg cgtgggcgcg caacaacggt agggtaatga
    10981 aatggtcgcc gcccaaactc aaacagcgtt tgccggaaga aagtaatttg ccggcgtgcg
    11041 cttccatttt ttcgacaaaa tccctgctgt cgccaaaaga aaaaaccaag tcgccgcaat
    11101 caataatgtt caggcgttcg cgcacatcaa atgtccatgg aaacctgcgg tgctcccaag
    11161 cgaggttgac ggaggcgcgc cggatggctt caggaccgaa acgcgcgccg gaacgccctg
    11221 aaaccgccat atcataaggc acgccggtaa taacccaatc ggcatgactt tcatacggca
    11281 taaaattaag cggcaggcgc aaaaacccga aattattgga aacgagggag ttgtcggttt
    11341 gtcctgccag tgtgctgtat tgcatcgtaa tgattccttg taattggttt caatcggtcg
    11401 tgatgattgg tgtttgagta agaaaatcgg gcttcagacg acatatccga tgccttgatg
    11461 cgtctattcg tcttccaaat aggtataacc attaagcccc gcttcgagtt cttttaagaa
    11521 agacatagcc tgcgaggcag gaaggtctga atgttcgatt tgttcgcgat agcgtttcat
    11581 cagctctttc ggatcttgat aaacgtattc gagcatatcg gcaacggtgt ttccttcatc
    11641 gtaatcgatg acggtaaatt gtccgtcttc ccctacaaca acatcggcag tggcagtgtc
    11701 gccgaaaaga ttgtgcatat tgccgagtat ttcctgatat gctcccacca taaaaaagcc
    11761 taaaagcggc ggctcttctt cgggataatc aggcataggc atcgtaccgg cgatgccgtc
    11821 gccgtcgatg tagtggtcaa tcgtaccgtc tgaatcgcag gtaatgtcca acaacacggc
    11881 gcggcgcgca atcggttcat tcaaaccggt aatgggacaa acagggaaaa gttgatctat
    11941 gccccaagca tcgggcaaag attggaagag tgagaaattg acatacagct tatcggcaaa
    12001 acgttcttgc aattcgtcaa taatggttcg gtgagaccgg tgtttttcat taaacaattc
    12061 gccgacttca tgacagatat ttaaatacag ttgctccgcc cacgcacgtt gcgccaaact
    12121 caacagcccg acattatact gattatgcac atcggcaaga tcaaactgcc cttcgtgtat
    12181 ccagctgcgt aaggaacgtt tttcccgcga ggcggaaata tccgtccaag tttcccacat
    12241 actgtgcaac acacgcggtg cttcgggcga tggcgcatcc agccggcgcg gtttgtaacg
    12301 ttcaacgcct ataacattag caaccaaaac ggcgtgatgt gcggtaatgc cgcgcccgct
    12361 ctcggtgatg attgtcggat gcggcagccc gtgttcgaga caagcctggc tgatgcccca
    12421 tacgactgtg gcggcatatt cgttgaggct gtaattaacg gaacaatccg attgtgtgcg
    12481 gtttccttcg taatccacgc caagcccgcc gcctacatca aaacagcgga tatttacccc
    12541 cagtttgtgc aactcaacat aaaaccgagc cgattcgtgt acacctgtgg caacatcacg
    12601 gatgttccca agctgcgagc ccaaatggaa atgcaaaagc tgcaggcagt ccagcctgtt
    12661 tttttgtttc aaaatatcga ccagttgcaa aacttgggaa gccgacaagc cgaattttga
    12721 tttttcccca cccgaagact gccattttcc cgaaccttgg gaagccagtc tggcgcgcac
    12781 acccaaacgg ggcttgatgc cgagtttttc cgcctcttcc aataccattt gtatttcgga
    12841 cagcttctca atcaccaaat aaacctgatg ccccagtttt tcgcccatca aggcgaaacg
    12901 gatatattca cggtctttat agccgttgca gacgattaat gtttgccggg tgccggcgtg
    12961 tgccaaaacc gccatcagtt cggctttaga accagcttcc aaaccatgcg gttgtccgct
    13021 tgacataagc gattcgatga cgcggcggtg ttggttgacc ttgatagggt aaaccaaaca
    13081 ataaccgccc ttatagccgc actcttcccg tgccgtctga aaggcgcggt taatgtcgcg
    13141 gaggcggtgt tcgaggattt gcggaaaaca aaacaaaaca ggcaggcgcg cctgatgttt
    13201 ttgttgcacg gcttcagtca gtttttgcag tgaaacagtt tgattgtgtt gcgagggatt
    13261 ggggcggacg atgatttcgc cggaatcgtc aacatcataa taacctatgc cccaatgatt
    13321 aatgttgcac acttcacgga tggtaaggat aggcataata aacctgctcc gtctgtcgtg
    13381 ttgaaaagga atgattataa caaatcagcg tgaaatgtca tttttttaat aagaaaagcc
    13441 tgcctcatac ctgatgagaa acaggcaaaa tgccgtctga acgcttcaga cggcattttg
    13501 gttcagcttt ccatcaaagg aatcagcgat cgagctgctc tttgatgatt ttcaggtcgg
    13561 ggtaagacaa cacgatgtcg tattcgcggc cgtctttata ggcttccact tccaaaacag
    13621 gtttgcccca atggtcgtcg gcatcgacat cgtgaacctg ataaccgcgc tgttccaaca
    13681 ttttcacggc ttttgtgcgg ttttgttcaa aatggggatc gccgtaaatc tgacgctcgg
    13741 cagagtcgcc ggcaaatgcg gctgcggcac tcagggaaac aacggcgacc aataacagtt
    13801 ttttcatttt cagtcctttt tttatcggtt gattgaacaa gatgtgtttt tcaataccgc
    13861 cattaaaaca cagcaaaatt aggtttgaat tagagggaag tcaagaagcg taaatgccgt
    13921 ctgaaaaaaa cagagccgtc aaacggctct gttttcctta tgcttctttg gtttcagccg
    13981 ccttttgacg caggcgcaaa ctcaattcgc gcaactgctt gtcgtccacg ctgttgggcg
    14041 cgttggtcag caggcattgg gcgcgttgtg ttttcgggaa ggcaatcacg tcgcggatag
    14101 attcggcgcc ggtcatcagg gtaaccaaac ggtcgaggcc gaatgcaagg ccgccgtgag
    14161 gaggcgcacc gaatttcagg ttgtccaaga ggaagccgaa tttctcttgt tgctcttcag
    14221 ggctgatttt cagcgcggca aacactttct cttgtacgtc tgcacggtgg atacggatag
    14281 agccgccgcc gatttcccag ccgttcaata ccatgtcgta ggcacgggcc aggcagtttg
    14341 cagggtcgga aaccatcagg tcttcatgac cttctttagg cgcggtaaac ggatggtgta
    14401 cggcaacgta gcggtcggct tcttcgtcgt attcgaacat tgggaaatcg acaacccaca
    14461 aaggtttcca ttcgtctgtg aagtagccgt tatctttgcc gtgttccaag ccgactttga
    14521 tacgcaatgc gccgatggct tcgttcacaa ctttggtttt gtctgcaccg aagaagataa
    14581 tatcgccgtt ttgtgcgccg gtacgcgcga tgatttcctt cagggcattc tcagacagga
    14641 attttacgat tggagattgc aggccgctgt cttcgccgtt ggagaggttg cccacatcat
    14701 ttactttgat gtatgccaga cctttcgcac cgtagatgcc gacaaattta gtgtattcgt
    14761 cgatttcttt gcggctgaat ttcgtaccgt tcggcacacg cagggcaacc acgcggccgc
    14821 ctttcatgtc ggctgcgcca cggaagactt tgaattcttc cgttttcatc aggtcggtca
    14881 actcggtgaa tttcaagttg atacgcatgt ccggtttgtc agagccgtag tagaacatgg
    14941 cttcagagta aggcatgcgt gggaagtcgc ccaagtccac gcccagcgcg tctttgaaga
    15001 cttgtttcgc cataccttcg gtgatgtcca tgatttcatc ctcgtttaag aacgaggttt
    15061 ccaagtcgat ttgcgtgaat tcaggctgac ggtcggcacg caagtcttcg tcgcggaagc
    15121 acttggtgat ttggtagtaa cggtcgaaac ccgccaccat caacagttgt ttgaacaatt
    15181 gcggcgattg cggcagcgcg aagaactcgc ccggatgaac gcggctcggc acgaggtagt
    15241 cgcgcgcgcc ttcgggcgtg gagcgggtca gcatcggggt ttcaatgtcg atgaaacctt
    15301 gcgcgtccaa gtagcggcga acgcccatag cgacttggta acgcaggcgc aggttgcgct
    15361 gcatcaccgg acggcgcagg tcgataacgc ggttggtcag gcgaacgttt tcgctgatgt
    15421 tttcgtcgtc gatttggaac ggaggcgtag cggcagcgtt caacacttcg atttctttgg
    15481 caaggatttc gattttgccg gaaatcattt tgtcgttggt cgtgccttcg ggacggttgc
    15541 gtacgcggcc ggtaatgctc aaaacgtatt cgttgcggga ggaatcggca gcggcaaacg
    15601 cttcgggcgt gtcgggatcg atcacgactt ggacgatgcc ttcgcggtcg cgcaggtcga
    15661 taaaaatcac accgccatgg tcgcgtcgac ggtgtaccca gcctttgacg gtaacggttt
    15721 ggtctaagta ttgctcgcta atcagaccgc aatagttggt acgcataaaa tcacctttta
    15781 ttgatttaaa ctgaaaacag aaaatgccgt ctgaacggcg gctttattgt tgttcgggca
    15841 aatccgcctt ttcagacggc ataggtcctg ccaatgtttt gacgggcagg tcgtcaggga
    15901 tgaccatacc cagcgaaatc acatatttca acgcttcgtc cacgctcata tcgagttcgc
    15961 gcacatcgct tttctttacc ataatatagt aaccgccggt cggattcggc gtggtcggaa
    16021 catacacgga aagataatcg ccgtccttcg gcaatgcggc cttaaccgca ttcgacacct
    16081 gaccggacac gaatgcgatt gtccaaatac ccgattgggg aaacggcacg agtactggtg
    16141 ttttaaacga acggctgctg tcggacagca gcgattcgga tacttttttc acactcgaat
    16201 agatggactt cacaaccgga atccgcccca acaagctgtc ccacgcggca agaatctgcc
    16261 ggcccaatac gtttgcggca aataatccgg ttacaaacaa tacggcaatg gcaacgataa
    16321 cgcccagccc cgggatatta aaccccaaaa catattgcgg ccgccattgc ttcggcagca
    16381 ggttgacgag ctgatcggac gcggaaacga tataggaaac cacccaaacc gttaccgcaa
    16441 tcggcagcca gaccaaaatg cccgtaatca gatatttttt taacgccttg gcagctttac
    16501 cgccttcggc cgcaggttcc gtcatcttgc ttgattccga caaagtccgt acaaaccgca
    16561 cattatacgc gtttgcccgg attcaaacga aatttttatc ccgccccgcc aaaccgccag
    16621 cggcttcaga cggcacggca acttgatata ccgtctgaac acgcggttca gatgccgtcc
    16681 aagtcgttga acatcaaccc gataccgata ccgttctgct tgtggttgta gtcgatcagg
    16741 ctctcgccgt aaccgtggaa tccgcgtacc acgcctttga gtttgccctt aatcggaaac
    16801 gtgtaggcgg cttcaatcgc gccgtagccc gttttggggt tgtagcgcaa tacggaatac
    16861 acattctgcc tgtcgttcag gcggtactgc agcttcacgt cgccataccc catatagtcg
    16921 gcaatatcgg gattgtcgtt tttatcgccg ctctgatcga acgcacgcac ccacacgcgc
    16981 ggaatcaccg tcaatttgcc ccattccatg cctgccatgg cgtaaatcct gttccacgaa
    17041 cgcgattcgg gacggctctg tccgttggac tggtggacaa aacccgcacc gagcatacgc
    17101 agcctgccgc cgaacggcaa atccgccttc acaggctggg tcaggaaaat ttcaggtttg
    17161 taatccgtat tgcggaacgg cgcggatttc ctgccttggt tgtaaatctg ccaatcggat
    17221 ctttgggtgt agccgaacca cagatccgcg cgggttttaa acaaatcttc ggcaattttg
    17281 cttttgaacg aaacctgcaa tttggtttcc gcacgtttct gctgtccgaa tttttcctgt
    17341 acagtcgtac cgcgcgtcgg cgaactcggg gcatagttgg gcgaattgtt gtaccagagc
    17401 ggcataaggt acatcggatt gtgttcgcgt acgcccaaca gcccgcgcaa atcgtttttg
    17461 tccaagtcgt acatcaggct caaaggcgta tagatgtcgg cggtttcgcc cgcactgtcg
    17521 gcaggaagcg catccccgcc tttttcaaca acaatgaccg cctcgccctt atccaggctg
    17581 ctgcggacgg tttccgtcag attgagtacg gctttcgact cctgcccttc ctgccctgcc
    17641 gaagacggaa gctgtgccgc aaaaatcctg tcgtaacacg ccaaacgcgt aacattgtcc
    17701 gtcaaagcgg cgcattgcag cgcggtctct ccaaaagcgg atgccatcgg caacagtcct
    17761 gtcaaaagaa tatagcgcat attccgtgta ttcatctccg cccccattgt cggcatattg
    17821 gttttcaaac ggcattttat agcggattcg gataaaaacc gcaccctttc cgccatttcg
    17881 ggattttgcc cccgcaatac agaaaacccc gaaaccgtcg ggcttcaggg ttttccgctt
    17941 atcgcgtatc aaccgccttg gcggttttgc aaaaatcaag ccagtgcttt tacttttgca
    18001 gacagacggc ttttgtggcg tgccgctttg tttttgtgga acacgccctt gtcggcgatg
    18061 cggtcgatga ctttgacgga ctcttggtaa accgcttgtg cggcagcttt atcgcctgct
    18121 tcgactgctt tcaatacttt tttcactgca gtgcggaatg cggtacgcag gctagcgttg
    18181 tgggcgcgtt gtttgacgga ctggcgggca cgtttgcgtg cttgtgcgct gtttgccata
    18241 ttggaatctc ctgaaagaaa aataaattct gtaaacgcgc aattttaaag ggggtttaca
    18301 ttatatgcaa gccttttctc tctatccgcc cgtcggacac cctgacagcg caaaaaaacg
    18361 gcaaaatcgt gcggacgttt tccccctctt ttgaaaacag ggtaattttt tagggaaatc
    18421 agtccaatat cactttgagt ttgcacaaat ttactttaca atgcccaaac cttgcgccgg
    18481 ggtgtttatg gggcgcgggg ttttcttttt ttccaacctc tttcatcagg aatctgcccg
    18541 tatgaaaaaa tccgtattag ccgttttggc cgcgctgtct ctggcagcct gcggcggcag
    18601 cgaaaaaaac gccgtgcaac ctcaagcaga cgctgcgtct gctgccaatg ccgaagccgc
    18661 tgccaccgat actctgaaca tctacaactg gtcgaactat gttgacgaga gtacggtcga
    18721 agactttaaa aaagccaaca atctgaagct gacttacgac ttgtacgaaa acaacgaaac
    18781 gctggaagcc aaaatgctga ccggcaaatc cggttacgat ttggttgtgc cgggcatcgc
    18841 cttcctgccg cgccaaatcg aggcgggcgc gtatcaaaaa gtcaacaaag acctgattcc
    18901 caactataaa aacatcgatc ccgaactctt gaaaatgctg gaaaccgccg acccgggcaa
    18961 ccagtatgcc gtcccctatt tctccggcgt gaacacgatt gcgattacgg cgaaaggcaa
    19021 agagcttttg ggcggcaagc tgcccgaaaa cggctgggat ttgctgttca aacccgaata
    19081 cacccacaag ctgaaatcct gcggcatcgc cctgtgggac accccgagcg aaatgttccc
    19141 gattttgctg aactacttgg gcaaagaccc caaaggctcg aatcctgaag atttgaaggc
    19201 ggcggcggaa gtgttgaagt ctatccgtcc ggatgtcaaa cgtttcagcc cgtccatcat
    19261 cgacgagctg gcgcgcggcg acatctgcct ggcggcaggc aacggcggcg atttgaactt
    19321 ggcgaaagca cgttccgaag aagtgaaaaa caacgtcggc atcgaagtgc tgaatccgaa
    19381 aggcatgggc ttctggattg agtcttggct gattcccgcc gatgcgaaaa acgtcgccaa
    19441 tgcccacaaa tacatcaact acacgctcga ccccgaaatc gcggcgaaaa acggcatcgc
    19501 cgtaaccttt gcccccgcca gcaaaccggc gcgcgaaaaa atgcctgccg aactggtaaa
    19561 cacccgttcc atcttcccga acgagcagga tatgaaagac ggttttgtga tgccgcaaat
    19621 gagtacggat gcgaaaaaac tgtctgtcag cctgtggcag aaaatcaaag tcggcaccaa
    19681 ctgatttgaa gcattaaaaa tgccgtccga acatcgttcg gacggcattt tatattggat
    19741 tgaaatagaa atatttatat agtggattaa caaaaatcag gacaaggcga caaagccgca
    19801 gacagtacaa atagtacg
//
LOCUS       DBBZXU010000027        19731 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.027, whole genome shotgun sequence.
ACCESSION   DBBZXU010000027 DBBZXU010000000
VERSION     DBBZXU010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19731
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.027"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            47..1225
                     /locus_tag="ACJJDE_000841"
     CDS             47..1225
                     /locus_tag="ACJJDE_000841"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HGG7540792.1"
                     /translation="MAFLKLTEQNVQGKTVLIRADMNVPFKDGKISDDTRIRASLASI
                     QYCMDNGASVIVMTHLGRPTEGEFHPEDDVAPVAAHLGGLLGKNVKVLNDWRENKPAL
                     NAGDVVMLQNVRINKGEKKNDLELGKAYASLCDVFVNDAFGTAHRAQASTEAVAQAAP
                     VACAGVLMAGELDALGKALKQPARPMVAIVAGSKVSTKLTILESLADKVDQLIVGGGI
                     ANTFLLAEGKAIGKSLAEHDLVEESKKIMAKMAAKGGSVPLPTDVVVAKAFAADEEAV
                     VKDIADVAEDEMILDIGPKSAAALADLLKAAGTVVWNGPVGVFEFDQFAGGTKALAEA
                     IAQSKAFSIAGGGDTLAAIAKFGVTEQIGYISTGGGAFLEFLEGKELPAVAALEKRGA
                     "
     gene            complement(1292..1540)
                     /locus_tag="ACJJDE_000842"
     CDS             complement(1292..1540)
                     /locus_tag="ACJJDE_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990229 - iron-sulfur cluster assembly
                     complex [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HGG7540793.1"
                     /translation="MLTSEQVKAMIEGVAKCEHIEVEGDGHHFFAVIVSSEFEGKARL
                     ARHRLIKDGLKAQLESNELHALSISVAATPAEWAAKAQ"
     gene            complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="ACJJDE_000843"
     CDS             complement(1631..2548)
                     /gene="ftsX"
                     /locus_tag="ACJJDE_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="permease-like cell division protein FtsX"
                     /protein_id="HGG7540794.1"
                     /translation="MSIIHYLSLHVESARTALKQLLRQPFGTLLTLIMLAVAMTLPLF
                     MYLGIQSGQSVLGKLNESPQITIYMETAAAQSDSDTVRSLLARDKRLDNIRFIGKEDG
                     LEELQSNLDQNLISMLDGNPLPDVFIVTPDPATTPAQMQAIYRDITKLPMVESASMDT
                     EWVQTLYQINEFIRKILWFLSLTLGMAFVLVAHNTIRLQILSRKEEIEITKLLGAPAS
                     FIRRPFLYQAMWQSILSAAVSLGLCGWLLSAVRPLVDAIFKPYGLNIGWRFFYPEEIV
                     LVFGFVIALGVFGAWLATTQHLLGFKAKK"
     gene            complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="ACJJDE_000844"
     CDS             complement(2545..3195)
                     /gene="ftsE"
                     /locus_tag="ACJJDE_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HGG7540795.1"
                     /translation="MIRFEQVSKTYPGGFEALKNVSFQINKGEMIFIAGHSGSGKSTV
                     LKLISGITKPSRGKILFNGQDLGTLSDNQIGFMRQHIGIVFQDHKILYDRNVLQNVIL
                     PLRIIGYPPRKAEERARIAIEKVGLKGRELDDPVTLSGGEQQRLCIARAVVHQPGLLI
                     ADEPSANLDRAYALDIMELFKTFHEAGTTVIVAAHDETLMADYGHRILRLSKGRLA"
     gene            complement(3192..3383)
                     /locus_tag="ACJJDE_000845"
     CDS             complement(3192..3383)
                     /locus_tag="ACJJDE_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540796.1"
                     /translation="MPSESASDGIFPARPSVSAKLIHYLKTGGIFIIGTVLPIVQTAY
                     PCGRNRPKRYAAHSLQDLL"
     gene            complement(3391..3873)
                     /locus_tag="ACJJDE_000846"
     CDS             complement(3391..3873)
                     /locus_tag="ACJJDE_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HGG7540797.1"
                     /translation="MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVR
                     IVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIW
                     RYTGANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
                     "
     gene            3997..4350
                     /gene="arsC"
                     /locus_tag="ACJJDE_000847"
     CDS             3997..4350
                     /gene="arsC"
                     /locus_tag="ACJJDE_000847"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271974.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0008794 - arsenate reductase
                     (glutaredoxin) activity [Evidence IEA];
                     GO_process: GO:0046685 - response to arsenic-containing
                     substance [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HGG7540798.1"
                     /translation="MSEIKIFHNPRCSKSRAALSLLEERGIAAEVVKYLDTPPDLSEL
                     KDIFNKLGLASARGMMRVKDDLYKELGLDNPNLDNDALLRAIADHPALLERPIVLANG
                     KAAVGRPLENIEAVL"
     gene            4347..4991
                     /locus_tag="ACJJDE_000848"
     CDS             4347..4991
                     /locus_tag="ACJJDE_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HGG7540799.1"
                     /translation="MNKRLFCSRNGLRYYLLGGFCLSVFPFLLVFASSVWAVYRTGGQ
                     VLPPYVRADAALVLGAAAWDKRPSPVFRERINHAIALYQSRRVGKIVFTGGRTKKGYM
                     TEAEVGRRYALKQGVPARNILFENTSRNTYENLNNIRPVLRANGIASVVIVSDPYHLA
                     RAAEMAEDLGVRVYMSATPTTRFDAGNKKKIFMLQEGYALSLYRLEKWGRDFFN"
     gene            5195..6589
                     /gene="gltX"
                     /locus_tag="ACJJDE_000849"
     CDS             5195..6589
                     /gene="gltX"
                     /locus_tag="ACJJDE_000849"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HGG7540800.1"
                     /translation="MTVKTRFAPSPTGYLHIGGVRTALFSWAFARHHKGEFLLRIEDT
                     DLARSTAESVNIILDGMKWVGLDYDNADNVVYQTRRFERYKEVIAELLAKGDAYYCYC
                     SKEELEAMREKAEKEGTATYDRRWRPEAGKTLPEIPAGVQPVVRFKTPLDGVTKWTDL
                     VKGEISIPNEALDDLIIARADGTPTYNFCVVVDDYDMGVTHVIRGDDHVNNTPKQINI
                     LKAIGANLPEYGHLPMILNEQGKKISKRSGDTVAITDFGAMGILPEAMLNYLARLGWA
                     HGDDEFFTMEQFIEWFDLKDVSPSPSRMDLKKLYWINGEHIKITPNEKLAELVKPRLA
                     LRDIHETEKPALEDVLAQVKDRAQDLNALADECLYFYKKQVPAEADVAKHWDDEAAAR
                     MLRFAERLEGLEDWNAEAIHDLFKPFCDEEGIKMGKLGMPLRLAVCGTAKTPSVDAVL
                     ALIGKEEVLKRIRA"
     gene            6610..7005
                     /locus_tag="ACJJDE_000850"
     CDS             6610..7005
                     /locus_tag="ACJJDE_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540801.1"
                     /translation="MPSDVGMRLQTAFKRKLNMKKILYFLMFVFSTSVWAGDAEDNLL
                     SIQSGYRALLQKQNNLDGKIIGMQSDLEDARRRLQTAQADIARLEAEIPAAMAQKARQ
                     AEELRQIGVRLDYAWNAVYGAGGTKASGN"
     gene            7009..7500
                     /locus_tag="ACJJDE_000851"
     CDS             7009..7500
                     /locus_tag="ACJJDE_000851"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7540802.1"
                     /translation="MNSLFVDNTVFITRLKAGHIGRLVQALFEEWHGFEPWSSVDKIH
                     AYYGRCLKDDELPLAFAAVDDSGTLLGSATVKRHDMESFPQYEYWLGDVFVLPEYRGK
                     GIGRRLVAHCIGAARSLGIKFLYLYTPDVQIFYESFGWAVVGRHFHNGEWVTVMRLDM
                     DKV"
     gene            complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="ACJJDE_000852"
     CDS             complement(7623..10217)
                     /gene="mutS"
                     /locus_tag="ACJJDE_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HGG7540803.1"
                     /translation="MSKSAVSPMMQQYLGIKAQHTDKLVFYRMGDFYEMFFDDAVEAA
                     KLLDITLTTRGQVDGEPVKMAGVPFHAAEQYLARLVKLGKSVAICEQVGEVGAGKGPV
                     ERKVVRIVTPGTLTDSALLEDKETNRIVAVSPDKKYIGLAWASLQSGEFKTKLTTVDK
                     LDDELARLQAAEILLPDSKNAPQLQTASGVTRLNAWQFAADAGEKLLTEYFGCQDLRG
                     FGLDGKEHAVAIGAAGALLNYIRLTQNLMPQHLDGLSLETDSQYIGMDAATRRNLEIT
                     QTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAVAALESQYKPL
                     QCRLKNIADIERIAARIAVGNARPRDLASLRDSLFELAQIDLSANGSSLLETLKAVFP
                     ENLSTAEQLRQAILPEPSVWLKDGNVINHGFHPELDELRRIQNHGDEFLLDLEAKERE
                     RTGLSTLKVEFNRVHGFYIELSKTQAEQAPADYQRRQTLKNAERFITPELKAFEDKVL
                     TAQEQALALEKQLFDGVLKNLQTALPQLQKAAKAAAALDVLSTFSALAKERNFVRPEF
                     ADYPAIHIENGRHPVVEQQVRHFTANHTNLDHKHRLMLLTGPNMGGKSTYMRQVALIV
                     LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSL
                     VLMDEVGRGTSTFDGLALAHAVAEHLLQKNKSFSLFATHYFELTYLPEAHAAAVNMHL
                     SALEQGQDIVFLHQIQPGPAGKSYGIAVAKLAGLPVRALKSAQKHLNELENQAAANRP
                     QLDIFSTMPSEKGDEPNVGNFVDKAEEKHFEGILAAALEKLDPDSLTPRKALSELYRL
                     KDLCKSVS"
     gene            10659..11663
                     /gene="gap"
                     /locus_tag="ACJJDE_000853"
     CDS             10659..11663
                     /gene="gap"
                     /locus_tag="ACJJDE_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7540804.1"
                     /translation="MSIKVAINGFGRIGRLALRQIEKAHDIEVVAVNDLTPAEMLLHL
                     FKYDSTQGRFQGTAELKDDAIVVNGKEIKVFANPNPEELPWGELGVDVVLECTGFFTN
                     KTKAEAHIRAGARKVVISAPGGNDVKTVVYGVNQDILDGSETVISAASCTTNCLAPMA
                     AVLQKEFGVVEGLMTTIHAYTGDQNTLDAPHRKGDLRRARAAALNIVPNSTGAAKAIG
                     LVIPELNGKLDGSAQRVPVATGSLTELVSVLERPVTKEEINAAMKAAASESYGYNEDQ
                     IVSSDVVGIEYGSLFDATQTRVMTVGGKQLVKTVAWYDNEMSYTCQLVRTLEYFAGKI
                     "
     gene            complement(11733..11852)
                     /locus_tag="ACJJDE_000854"
                     /pseudo
     CDS             complement(11733..11852)
                     /locus_tag="ACJJDE_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="ACJJDE_000855"
     CDS             complement(11921..12601)
                     /gene="tsaA"
                     /locus_tag="ACJJDE_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HGG7540805.1"
                     /translation="MTYTIVPIATARSPYKQKFGIARQPGLVSAAEVCIELNPEFTAD
                     SVRGLEHFDYVWISFIFHGVLDEGWAQMVRPPRLGGKQKMGVFATRSPHRPNHLGLSL
                     LKLERIETGKPVRLYCSGADLLDGTPIVDIKPYIPFVESKPDAASGFVSGKPVELEVV
                     WQENIGAENLSANTKNLISQSIAQDPRPAYQNIPERIYVMNIADYEVRFQIEENRATV
                     IDLSPTPL"
     gene            12716..13351
                     /locus_tag="ACJJDE_000856"
     CDS             12716..13351
                     /locus_tag="ACJJDE_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HGG7540806.1"
                     /translation="MIVSIDVDAQKTFTPLCPKELPVNEGHLIVEELNAQAALADLRV
                     MTKDAHHAAAKWLVDNPVDMLKPTGLPDADLTWVAHAMVGTRGYELLDGLPCAKEYDY
                     CVWKGIDPELHPYGACFHDIEEKLSTGLIEWLRCQNTDTVIIGGLATDYCVKTTVLQL
                     LKGGRWQVVVNEAACRGIAPETIETAWQEMHSAGAIILKNADEINKYINNQ"
     gene            13388..14356
                     /gene="waaC"
                     /locus_tag="ACJJDE_000857"
     CDS             13388..14356
                     /gene="waaC"
                     /locus_tag="ACJJDE_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase I"
                     /protein_id="HGG7540807.1"
                     /translation="MKILLVRLSSMGDLIHTLPAIEDLARQCPDVELHWLCEAGFADI
                     ARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACF
                     AKMAKSPIYGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQV
                     FGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGN
                     EDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLLHLANALEKPVVG
                     IYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG"
     gene            14583..15332
                     /locus_tag="ACJJDE_000858"
     CDS             14583..15332
                     /locus_tag="ACJJDE_000858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HGG7540808.1"
                     /translation="MKALVAVKRVVDYNVKVRVKADGSDVDIGNVKMSMNPFDEIAVE
                     EAVRLKEAGKVSEIVAVSLGEKKCEETLRTALAMGADRAIHVETDAKLEPLAVAKLLK
                     AVADKENPQIFFLGKQAIDDDANQVAQMLAALLNAAQGTFASKVQIEGDEVQIVREID
                     GGEETIALKLPAVISADLRLNEPRFVKLPNIMAAKKKPLEKLAPADLATDILPRLKTV
                     KFAEPKARQAGVKVASVAELVEKLKNEAKVI"
     gene            15343..16278
                     /locus_tag="ACJJDE_000859"
     CDS             15343..16278
                     /locus_tag="ACJJDE_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HGG7540809.1"
                     /translation="MSVLIIVEHDNKQLNPTTLHAVTAAAKLGKVDLLVAGSGASAVV
                     ESAKQVAGVEKVLVADAAHYAEGLAEELAPLVVKLAADYRYVAATATTFGKNLLPRVA
                     ALLDVPQISDLTEIVDNTTFVRPIYAGNAFETVQANAEKLVLTFRATAFDAAAVQGGN
                     AEVINIETTPAQNLSRFVNRQLSHSDRPELTQAKVIVSGGRALGSAEKFNEVLTPLAD
                     VLGAAIGASRAAVDAEYAPNDAQVGQTGKVVAPQLYFAIGISGAIQHVAGMQDSKVIV
                     AINKDADAPIFNVADYGLVGDLFEIVPQLTEALKN"
     gene            16341..16952
                     /locus_tag="ACJJDE_000860"
     CDS             16341..16952
                     /locus_tag="ACJJDE_000860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HGG7540810.1"
                     /translation="MITTYKTITSPTQAGFKDKGSRFIAFAYPIRTLADVKKYLDPLK
                     EEHHKARHWCYAYRLGVDGMQFRANDDGEPSGSAGRPIWGQIDSVGITDVLVVVVRYF
                     GGTLLGVSGLIHAYKEATAQALAIAEVIEKNIEKTVWLKCEYPFLNEAIRIAKQYQAD
                     ILEQDLQLDCRLTVSLSLANYEVCVAAWKNTRQIEVNTEKPFE"
     gene            complement(17004..17321)
                     /locus_tag="ACJJDE_000861"
     CDS             complement(17004..17321)
                     /locus_tag="ACJJDE_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4298 domain-containing protein"
                     /protein_id="HGG7540811.1"
                     /translation="MQKRIDEIQSKYREWCHLLPQLEEDIRRWKHAVALIRDMDNFYT
                     HEYQACHRAIEDGAEVDLRTEGEYSIMSEDALWNALGEFHQLAWLYLRSSVDALDKYT
                     QED"
     gene            17479..18750
                     /gene="purD"
                     /locus_tag="ACJJDE_000862"
     CDS             17479..18750
                     /gene="purD"
                     /locus_tag="ACJJDE_000862"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HGG7540812.1"
                     /translation="MKLLVIGNGGREHALAWKLAQSPKVETVFVAPGNAGTAIEPKLQ
                     NIDLTAHQDLIEFCRKENIVFTVVGPEAPLAAGVVDDFRAAGLKIFGPTQYAAQLESS
                     KDFAKAFMAKYNIPTAQYQTFENADAAHDYVNQKGAPIVIKADGLAAGKGVIVAMTLD
                     EAHAAIDDMLLDNKMGNAGARVVIEDFLQGEEASFIVMVDGNNVLPMATSQDHKRLLD
                     GDKGLNTGGMGAYSPAPVVTPVVYERAMNEIILPTVAGMKAEGHEFTGFLYAGLMIDQ
                     SGAPYTIEFNCRFGDPETQPIMSRLNSDLADLVEAAIDGKLDSVAAEWNPQTAVGVVL
                     AAQNYPETPKKGDVISGLDAANQVGKVFHAGTTANEKGDVLTNGGRVLCVVGLGDNVA
                     QAKAKAYGALEKISFDGMQYRKDIADKAINR"
     gene            18784..19386
                     /locus_tag="ACJJDE_000863"
     CDS             18784..19386
                     /locus_tag="ACJJDE_000863"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HGG7540813.1"
                     /translation="MTDMLQTAFYIMLFPRIIAASAQRKLSVYLKKGGLVAYPTESCY
                     GLGCLPTLAKALGKLAHLKKRPQHKGMIVIGNQFEQLQPLLQMPSENLQDMLRKEWPA
                     PKTFLLSAKSCVLPELRGKQRSKLAVRVPAHVGARRLCQALQTPLVSTSCNRAGKRAC
                     RTEREVRRQFGRDVWIVGGRIGRQKSPSQIIDGETGKRLR"
     gene            complement(19532..>19731)
                     /locus_tag="ACJJDE_000864"
     CDS             complement(19532..>19731)
                     /locus_tag="ACJJDE_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7540814.1"
                     /translation="QTKRNRYLSKTRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSH
                     LKAMCLNLLKAANRLSAPAAA"
BASE COUNT         4766 a         4499 c         5514 g         4952 t
ORIGIN      
        1 cattaattgt ttctgtatcg caaacactga ttgaaaagga ctgattatgg catttttaaa
       61 actgaccgaa caaaacgtgc agggcaaaac cgtcctcatc cgcgccgata tgaacgtgcc
      121 gttcaaagac ggcaaaatca gcgacgacac ccgtatccgc gcctcgctcg cgtccatcca
      181 atactgcatg gacaacggcg catccgttat cgtgatgacc cacttgggcc gcccgaccga
      241 aggcgagttc caccccgaag acgacgttgc gcccgttgcc gcgcatttgg gcggcctgtt
      301 gggcaaaaac gtgaaagtat tgaacgactg gcgcgaaaac aaaccggctt tgaacgcggg
      361 cgatgtcgtg atgctgcaaa acgtgcgtat caacaaaggc gagaagaaaa acgatttgga
      421 actgggcaaa gcctacgctt ctttgtgcga cgtgttcgtc aatgacgcgt tcggcaccgc
      481 gcaccgcgcc caagcctcga ccgaagccgt cgcccaagcc gctcccgttg cctgcgccgg
      541 cgtattgatg gcgggcgaac tcgacgcttt gggcaaagcc ttgaaacagc ccgcgcgccc
      601 gatggttgcc atcgttgccg gcagcaaagt gtccaccaag ctgaccatcc tcgaatcgct
      661 ggcggacaaa gtcgaccaac tcatcgtcgg cggcggtatc gccaacacct tcctgttggc
      721 ggaaggtaaa gccatcggca aatctttggc ggaacacgat ttggtggaag aatccaaaaa
      781 aattatggca aaaatggcgg ccaaaggcgg ttctgtgccg ctgccgaccg atgtcgtcgt
      841 tgccaaagcc tttgccgctg atgaggaagc ggtggtaaaa gacattgccg acgttgccga
      901 agacgagatg attttggaca tcggcccgaa atctgccgcc gcgcttgccg atttgcttaa
      961 agccgccggt acggtcgtat ggaacgggcc ggtcggcgtg tttgagtttg accagttcgc
     1021 aggcggtacg aaagcccttg ccgaagccat tgcccaaagc aaagcgttct cgattgcggg
     1081 cggcggcgac acgctggcgg cgattgccaa attcggcgtt accgaacaaa tcggctacat
     1141 ctccaccgga ggcggtgcgt tccttgagtt cttggaaggc aaagagctgc ctgccgtagc
     1201 cgctttggaa aaacgcggcg cgtaagcggt ttgatataaa aaatgccgtc tgaaacgttg
     1261 tgctgtttct gacggcattt ttgtgtggcg gttattgtgc tttggctgcc cattccgccg
     1321 gagtggcggc aaccgaaatg gaaagtgcgt gcagttcgtt actttccagt tgggctttga
     1381 gtccgtcttt aatcaggcgg tggcgcgcga ggcgtgcctt gccttcaaat tctgatgaaa
     1441 cgatgacggc gaaaaaatgg tgtccgtcgc cttctacttc gatatgttcg cattttgcca
     1501 cgccttcaat catggctttt acttgttccg aggtcagcat ggtaggttcc ttgttggaaa
     1561 aatgcgccat tatactggca aattgaaatg ccgtctgaaa acgggttcgg acggcatttt
     1621 tgacggtgtt ttattttttg gctttgaagc cgagcaggtg ctgggtggtg gcaagccacg
     1681 cgccgaatac gcccaacgcg atgacgaagc cgaacaccag cacgatttct tcagggtaaa
     1741 agaaacgcca gccgatgttc aagccgtagg gtttgaaaat ggcatcgacc aatgggcgca
     1801 cggcagagag cagccaaccg caaagcccca agctgacggc ggcggaaagg atgctctgcc
     1861 acattgcctg ataaaggaag gggcggcgga taaacgacgc gggcgcgccc aagagtttgg
     1921 tgatttcgat ttcttctttt cggctgagga tttgtaggcg gatggtgttg tgcgcgacaa
     1981 ggacgaacgc catccccagc gtcagggaaa gaaaccataa aattttgcgg atgaactcgt
     2041 tgatttggta cagcgtttgc acccattcgg tatccataga cgcggattcg accataggca
     2101 gtttggtaat gtctcggtag attgcctgca tttgggcggg cgtggttgcc gggtcggggg
     2161 taacgataaa gacatccggc agggggttgc cgtcaagcat ggaaatcaga ttttggtcga
     2221 gattggactg taattcttcc agaccgtctt ctttgccgat gaagcggatg ttgtcgagcc
     2281 gtttgtcgcg cgccagcagg ctgcgcacgg tatcgctgtc gctttgtgcg gcggcggttt
     2341 ccatatagat tgtgatttgc ggcgactcat tgagtttgcc caacacgctt tgcccgcttt
     2401 ggatgcccaa atacataaac agcggcaggg tcatggcgac ggcgagcatt atgagggtaa
     2461 gcagtgtgcc gaaaggttgg cgcagaagct gtttgagcgc ggtgcgcgcg gattcgacgt
     2521 gcagcgagag gtagtggatg atgctcatgc gagtcgtcct ttcgagaggc gcaggatgcg
     2581 gtgtccgtag tccgccatca gggtttcgtc atgtgcggcg acgatgacgg ttgttcccgc
     2641 ttcgtggaag gttttgaaca attccataat atcgagcgcg taggcgcggt cgaggttggc
     2701 ggagggttcg tcggcaatca gcaggccggg ctggtgaacg acggcgcggg cgatgcacag
     2761 gcgttgttgt tcaccgccgg agagggttac gggatcgtcc aattctcgtc ctttcaggcc
     2821 gactttttcg atggcgatgc gggcacgctc ttcggctttg cgcggcggat agccgataat
     2881 ccgaagcggc aggatgacgt tttgcaggac gttgcggtcg tagaggattt tgtggtcttg
     2941 gaacacgatg ccgatgtgtt ggcgcataaa gccgatttgg ttgtcggaca atgtgccgag
     3001 gtcctgcccg ttaaacagga ttttgcccct gctcggcttg gtgatgcccg aaatcagctt
     3061 gaggacggtg gatttgcccg aaccggagtg tcccgcgata aatatcattt cgcctttgtt
     3121 gatttggaag ctgacgtttt tcagggcttc aaaaccgccg ggataggttt tggaaacttg
     3181 ttcgaaacgg atcataggag gtcctgtaag gaatgggcgg catatcgttt cgggcggttg
     3241 cgtccgcagg gatatgccgt ctgaacaata ggtaagacag tgccgattat aaagattccg
     3301 cctgttttta gatagtggat aagtttggcg gataccgaag gtcgggcggg aaaaatgccg
     3361 tctgaagcgg attcagacgg catccggcgt ttaacggcat tttgaatggg cgagtttgac
     3421 ggcttcggtc aggctttttt cgttcacttc cccggtaatg gtttgtttgt atccgcattt
     3481 cggggcttcg acgacggtaa agggcagtac gccgacattg tttccgtagg atttcataaa
     3541 gtttcggctg ttcgccccgg tgtaacgcca aatcgggtag gaaacagggg tttgcttgag
     3601 gaagttgccg atattgtcgg atgtgtcgag cgcgatgccg accatatcga cactgccttt
     3661 tttctgcgct ttgtaccatt tggacatggc aggcatctct tttcggcacg ggccgcacca
     3721 ggttgcccaa aggttgacga tgcgtacggg ggctttgagt gattgcaggc tttgcggggt
     3781 gttgtctttc catccggcca gttcgtctgc cgaggcggta tgtgcggcaa atgtggcggc
     3841 aagggtgatt gcggcaagat tcaagtattt catcgttttg tcctttgtat gtcgattcgg
     3901 gtattgtaaa ccgtttggta cggttgtagg cgggatattg agtaaaaccc tgtgtaagcc
     3961 gataataagg ggattgtcga gaagtaagga aatgtcatgt ctgaaatcaa aattttccac
     4021 aacccccgtt gcagcaaatc gcgtgccgcc ttgtccctat tggaagaacg cggcattgct
     4081 gccgaagtgg tcaaatattt ggatacgccg cccgacttgt ccgaattgaa ggatattttc
     4141 aacaaattgg gcttggcatc ggcgcgcggg atgatgcgcg tgaaagatga tttgtataag
     4201 gaattgggtt tggacaaccc caatttggac aatgacgcgc tgctgcgtgc catcgccgat
     4261 catcccgccc tgttggagcg tccgattgtt ttggcgaacg gtaaggcggc tgtcggcagg
     4321 ccgttggaaa atatcgaagc ggtattgtga acaaacggct gttttgcagc cgcaacggct
     4381 tgcgctatta cctgttgggc ggtttctgtt tgagtgtttt tccgtttttg ctggtgtttg
     4441 cctcatccgt ttgggcggtt tatcggacgg gcgggcaggt tttgccgccg tatgtccggg
     4501 cggatgccgc gctggtgttg ggcgccgccg cgtgggacaa acgcccttct ccggtttttc
     4561 gggaacgcat caaccacgcc atcgcgcttt atcagagccg cagggtaggc aaaatcgtgt
     4621 ttacgggagg gcgaaccaaa aaaggctata tgaccgaagc cgaggtcggg cggcggtacg
     4681 cgctcaaaca gggggttccg gcgcgcaaca tcctgtttga aaacacttcg cgcaacactt
     4741 atgaaaacct gaacaacatc cgtccggttt tgcgtgccaa cggtattgcc agcgtggtga
     4801 ttgtcagcga tccctaccat ttggcacggg cggcggaaat ggcggaggat ttgggtgtcc
     4861 gcgtttatat gtctgccacg ccgaccacgc ggtttgatgc gggaaataag aaaaaaatct
     4921 ttatgctgca agagggatat gcgttatccc tctaccgttt ggaaaaatgg gggcgggatt
     4981 ttttcaatta gctgtttcat tgaacttttt tttggacgca atcccgaaga aatccggtcg
     5041 gcggcgcgtg atacactgtt ccgcgtgccg aagcattgaa aacaaggaaa atgccgtctg
     5101 aaacttatcc gcaggcaggg ttcggacggc atttttaatg cccaagcacg gtaaaaacag
     5161 taaaataagc cgttttaaag attctggagc catcatgacc gtcaaaaccc gtttcgcccc
     5221 cagccccacc ggctacctgc acattggcgg cgttcgcacc gccttgtttt catgggcgtt
     5281 tgcccgccat cacaaaggcg agttcctatt gcgtatcgaa gacaccgact tggcgcgttc
     5341 caccgccgaa tccgtcaaca tcatcctcga cggcatgaaa tgggtcggtc tcgattacga
     5401 taacgccgac aacgtggtgt accaaacccg ccgcttcgaa cgctataaag aagtcatcgc
     5461 cgaactcttg gcaaaaggcg atgcctacta ctgctattgc agcaaagaag agctggaagc
     5521 gatgcgcgag aaagccgaaa aagaaggcac ggcgacttac gaccgccgct ggcggccgga
     5581 agcaggcaaa accctgcccg aaatccctgc cggcgtgcaa cccgtcgtcc gcttcaaaac
     5641 gcctttggat ggcgtaacca agtggacgga cctggtcaaa ggcgaaattt ccatccccaa
     5701 cgaagccctc gacgacctga ttattgcacg cgccgacggc acaccgacct acaacttctg
     5761 cgttgtcgta gacgactacg acatgggcgt tacccacgtt atccgcggcg acgaccatgt
     5821 gaacaacacc ccgaaacaaa tcaacatctt aaaagccatc ggcgcaaacc tgcccgaata
     5881 cggtcatctg cccatgattc ttaacgaaca aggcaaaaaa atctccaaac gcagcggcga
     5941 tactgttgcc attaccgatt tcggcgcgat gggtatcctg cccgaagcca tgctcaacta
     6001 tctggcgcgc ttgggctggg cgcacggcga cgacgagttc tttacgatgg aacaattcat
     6061 cgaatggttt gatttgaaag acgtttcccc gtccccaagc cgtatggatt tgaaaaagct
     6121 ctattggatc aacggcgaac acatcaaaat cacgcccaac gagaaactcg ccgaactcgt
     6181 caaaccgcgt ctcgctctgc gcgatatcca tgaaaccgaa aaacctgcgt tggaagacgt
     6241 gttggcacag gttaaagacc gcgcccaaga tttgaacgcc ttggcagacg aatgtctgta
     6301 tttctacaaa aaacaagtcc ctgccgaagc cgatgttgcc aaacactggg acgacgaagc
     6361 cgccgctcgt atgctgcgct ttgccgaacg cctcgagggt ttggaagact ggaatgccga
     6421 agccatccac gacctcttca aacctttctg cgacgaagaa ggcatcaaaa tgggtaaact
     6481 cggtatgccc ctgcgcctcg ccgtctgcgg tacggcgaaa accccaagcg tcgatgctgt
     6541 gttggcatta atcggcaaag aagaagtgtt gaaacgcatc cgcgcttaag ttatccacag
     6601 gcgtgggcga tgccgtctga tgtcggaatg cggcttcaga cagcattcaa acggaagttg
     6661 aacatgaaaa aaatattgta ttttctgatg tttgtttttt ctacaagcgt atgggcgggg
     6721 gatgcggaag acaatctgct cagcatccaa tccggctatc gtgccttact gcaaaaacaa
     6781 aacaatctgg acggaaaaat catcgggatg cagtcggatt tggaagatgc gcgccggcgt
     6841 ttgcagacgg ctcaggcaga catcgcccgt ttggaagcgg aaattcctgc agcaatggcg
     6901 caaaaagccc ggcaggctga agagctgagg caaatcggag tgcgtttgga ctatgcttgg
     6961 aatgcggttt acggcgcagg gggaacgaaa gcgtcgggga attgaccgat gaattccctc
     7021 tttgtggaca atactgtttt cattacacgg ctgaaagccg ggcatatcgg caggttggtt
     7081 caggcgttgt ttgaggagtg gcacggattt gaaccgtggt cttctgtgga taagattcat
     7141 gcctattacg gcaggtgttt gaaggatgac gaactgccgc tggcttttgc ggctgtggat
     7201 gattccggaa ccctgttggg ttcggctacg gtcaagcggc atgatatgga aagttttcca
     7261 cagtatgaat attggttggg tgatgtcttt gttttacctg aatatcgcgg aaaaggcatt
     7321 ggcaggaggc tggtcgccca ctgcataggc gcagcgcgtt cgctggggat aaagttcttg
     7381 tatctttata cgcctgatgt gcaaatattt tatgaatcat tcggctgggc ggttgtcggg
     7441 cgacatttcc ataacggtga atgggttacg gttatgcgtt tggatatgga taaggtttaa
     7501 gccgaatgga caaatgccgt ctgagctgtt cggacggcat ttttatgttt ggaaacttct
     7561 tgtcagataa tgtttatcca cagatttttc catatggttt gatgctgttc cgccaacgga
     7621 aattaagata cggatttgca caaatctttc agacggtaca gttctgacaa tgctttgcgc
     7681 ggggtcaggc tgtcgggatc gagtttttcc aaggctgctg ccaatatacc ttcaaaatgt
     7741 ttttcctctg ctttatccac aaagttgccc acattcggtt catctccttt ttcagacggc
     7801 atggtactga aaatatccag ttggggacgg ttcgcggcgg cttggttttc cagttcgttc
     7861 aaatgctttt gggcggattt caatgcgcgt acaggcaggc cggcgagttt ggcgacggca
     7921 atgccgtagc ttttaccggc gggacccggt tggatttggt gcaggaaaac gatgtcctgt
     7981 ccctgttcga gcgcggaaag gtgcatattg acggcggcgg cgtgggcttc gggcaggtag
     8041 gtcagctcga aatagtgggt ggcaaacagg ctgaaggatt tgtttttttg cagcaggtgt
     8101 tcggcaacgg cgtgcgcgag ggcgaggccg tcgaaagtgg aagtgccacg tccgacttcg
     8161 tccattaaaa caaggctttg ttcggtggcg tgatgcagga tgtaggcggt ttcgctcatt
     8221 tcgaccatga aagtggagcg gttggaggcg aggtcgtccg atgcgccgat gcgggtgaag
     8281 atttgatcga tgggcccgat tgtggcggca tcggcaggca caaaacagcc ggtgtgtgcc
     8341 aataaaacaa tcagcgcgac ttggcgcatg taggtggatt tgccgcccat attggggccg
     8401 gtgagcagca tgaggcggtg tttgtggtca aggttggtgt ggttggcggt gaagtggcgt
     8461 acctgctgtt cgacaacggg atggcggccg ttttcgatgt ggatagccgg atagtcggca
     8521 aactcggggc ggacgaagtt ccgctctttt gccaaggctg aaaatgtgga caatacgtcc
     8581 agcgcggcgg cggctttggc ggctttttga agctgcggca atgccgtctg aaggtttttc
     8641 aatacgccgt caaagagttg tttttctaag gcgagggctt gctcttgagc agtcagcact
     8701 ttgtcttcaa aggctttcaa ctccggcgtg atgaagcgtt cggcgttttt gagggtttgc
     8761 cggcgttggt agtcggcagg tgcttgttcg gcttgggttt tggacaattc aatgtaaaag
     8821 ccgtgaacgc ggttgaactc gactttgagt gtggacaaac cggtacgttc gcgttccttg
     8881 gcttccaaat ccagcaaaaa ttcgtcgcca tggttttgaa tgcggcgcaa ttcgtccagt
     8941 tcgggatgaa aaccgtggtt gatgacattg ccgtctttca gccagacgga aggttcgggc
     9001 aaaatggctt ggcggagctg ttcggctgtg gataggtttt ccgggaaaac ggctttgagg
     9061 gtttccaaca ggctgctgcc gtttgcggac aagtcgattt gtgccaactc gaacagactg
     9121 tcgcgtaaag atgccaaatc gcgcgggcgg gcgttgccga cggcgatgcg ggcagcaatg
     9181 cgttcaatgt ccgcaatgtt tttcagacgg cattggaggg gtttgtattg gctttccagc
     9241 gcggcaacgg cttcttggcg cgctcggatg tgggcgcggt tgcgtaaagg gtggtgcagc
     9301 cagagagcca agaggcggct gcccatatgg gtagcgcaaa ggtcgagcgt ggacatcagg
     9361 gtcggcgatt ttttgccgga gagggtttgc gtgatttcga gattgcggcg cgtggcagca
     9421 tccataccga tatattggct gtcggtttcg agcgacaggc cgtccaaatg ttgcggcatc
     9481 aggttttgcg tcagacggat atagttcaac agtgcacctg ccgcgccaat cgcaacggcg
     9541 tgttctttgc cgtccaaacc gaagccgcgc aaatcctggc agccgaaata ttccgtcagc
     9601 agtttttccc ccgcgtcggc ggcaaactgc cacgcgttca ggcgcgtaac acccgatgcc
     9661 gtctgaagtt gcggtgcgtt tttactgtcc ggcaacagaa tttccgccgc ctgcaggcgc
     9721 gccagttcgt cgtccaattt atccacagtt gtcagcttgg ttttgaattc gccgctttgc
     9781 agcgatgccc acgccaaacc gatgtatttt ttgtcggggg acacggcaac gatacggttg
     9841 gtttccttgt cttccagcaa tgcggaatcg gtcagcgtgc cgggcgttac gatgcgcacg
     9901 actttgcgct ccacaggccc tttgcccgcg ccgacttcgc cgacctgttc gcaaatcgcc
     9961 acgcttttgc ccaacttgac taggcgcgcc agatattgtt cggcggcgtg aaacggcacg
    10021 cctgccattt tgaccggctc gccatccacc tgtccgcgcg tggtcagggt aatatccaaa
    10081 agttttgccg cttctaccgc atcgtcgaaa aacatctcgt aaaaatcgcc catacggtaa
    10141 aacaccagtt tgtcggtatg ttgcgctttg atgccgaggt attgctgcat cattggggaa
    10201 acggcggatt tggacatggg gctgccttat cattaggaaa acggtattgt agcaaaaggt
    10261 tttgtcttcg acggaatgag actgaccgta agcctgtcaa taaggttgtg gagacaacta
    10321 ggaaaacagc aaagttatcc acagaaatat tattaagtca aaaaacatcc acgcttatct
    10381 gtcttataca gcaagtctta aactcaaact tatttgacaa aaagataatg aaaatattgg
    10441 atatttgcta cttacgcaca agcaggttgg caatcatcaa aatcatcatt aaaatttaaa
    10501 ttcaaatatt gatggtaaag gttttggaaa tctgtgcaaa cagcaaaatt catctatatc
    10561 aaataagcgt caagtagtta gatgtaatag tggaatgtaa ctttatttca gaatacaatg
    10621 caggcatcgg actttatttc acaacctgga gacaaaatat gagcattaaa gtagcgatta
    10681 acggtttcgg ccgcatcggc cgcctcgcat tgcgtcaaat tgaaaaagcc cacgacatcg
    10741 aagtcgtcgc cgtcaacgac ctgacccctg ccgaaatgct gctgcacctt ttcaaatacg
    10801 acagcacgca aggccgtttc caaggtactg ccgaattaaa agacgatgcc atcgtggtaa
    10861 acggcaaaga aatcaaagtt tttgccaatc cgaatcccga agaattgcct tggggcgagt
    10921 tgggtgtgga tgtcgtcctc gaatgtaccg gcttctttac caataaaacc aaagccgaag
    10981 cacacatcag ggccggcgcg cgcaaagtcg tgatttccgc acccggcggc aatgatgtga
    11041 aaaccgtcgt atatggcgta aaccaagaca ttttggacgg cagcgaaacc gttatctccg
    11101 ctgcttcctg caccaccaac tgccttgccc cgatggcggc agtcctgcaa aaggaattcg
    11161 gcgtagtcga aggcctgatg accaccatcc acgcctacac cggcgaccaa aacacccttg
    11221 acgcgccgca ccgcaaaggc gatttgcgcc gcgcccgcgc cgccgcgctc aacatcgtgc
    11281 ccaacagcac cggtgccgcc aaggccatcg gtctggttat ccctgaattg aacggcaaac
    11341 tcgacggctc cgcccaacgc gtccctgttg ccaccggctc gctgaccgaa ttggtttccg
    11401 tcctcgaacg ccctgtaacc aaagaagaaa tcaacgccgc gatgaaagcc gccgccagcg
    11461 aatcttacgg ctacaacgaa gatcaaattg tttcttccga cgttgtcggc atcgaatacg
    11521 gttcgctctt cgatgcgacc caaacccgcg tgatgaccgt gggcggcaaa caattggtga
    11581 aaactgttgc ctggtacgac aacgaaatgt cctacacctg ccaactcgtc cgcactttgg
    11641 aatactttgc aggcaaaatc taaggcttga acaaacctgt ggataagtaa atgccgtctg
    11701 aacacattgc gttcagacgg cattgtttat ctgtatagtg gattaaattt aaaccagtac
    11761 ggcgttacct cgccttgccg tactatttgt actgtctgcg gcttcgttgc cttgtcctga
    11821 tttaaattta atccgctata acttgatatt gcggcttatg gcgaacaaac aacagccgtt
    11881 tgttcaactg ctatgcggca aaaccggatt tttgcccgat ttaaagcggg gttggggaaa
    11941 gatcaataac ggttgcacgg ttttcctcga tttgaaatct gacttcgtaa tctgcaatat
    12001 tcatcacata aatccgttcg ggaatattct gataggcggg gcgcggatct tgggcaatgc
    12061 tttggctgat aaggtttttg gtgtttgcag ataaattttc cgcgccgatg ttttcctgcc
    12121 aaacgacttc caactctacg ggtttgccgc tgacgaaacc agatgcggca tcgggtttgg
    12181 attcgacaaa ggggatataa ggcttgatgt ccacaatcgg cgtgccgtcc agcaggtctg
    12241 cgccgctgca atagaggcgg acgggtttgc cggtttcgat gcgttcgagt ttcaggagcg
    12301 agagtccgag atggttgggg cggtgggggc tgcgcgtggc gaatacgccc attttttgtt
    12361 tgccgccgag ccgtggcggg cgcaccattt gtgcccagcc ttcatccaat acgccgtgaa
    12421 aaataaaact tatccacaca tagtcgaagt gttccagtcc gcgtacgctg tctgcggtaa
    12481 attcgggatt cagctcgatg catacttctg cggcagagac caaaccgggc tggcgggcga
    12541 tgccgaattt ctgtttgtag ggcgatcggg cggtggcgat agggacgatg gtgtaagtca
    12601 tgaggattgt ggataagttt ttcggaaaaa ccttatctta tcacagcctg ttttaccgct
    12661 tttgggcagt aatttgttat aatacagggc attttaattg cgttgaaatg atgagatgat
    12721 tgtttccatt gatgttgatg cacaaaaaac ttttacgcct ttgtgtccta aagagctgcc
    12781 tgtaaacgag gggcatttga ttgtcgaaga attgaatgcc caagccgctt tggcggattt
    12841 gcgcgtgatg acgaaagatg cgcatcatgc ggcagcaaaa tggcttgtgg ataaccctgt
    12901 tgatatgttg aagccgacag gtttgcccga tgcggatttg acttgggtgg ctcatgcgat
    12961 ggttggtacg cgcggctatg aattgttgga cgggctgcct tgtgccaaag aatacgatta
    13021 ttgcgtttgg aaaggtattg atcctgaatt gcatccttac ggcgcgtgtt ttcacgatat
    13081 tgaggaaaaa ctaagcacag ggctgattga atggctgcgt tgtcaaaata cggatacggt
    13141 tattatcggt gggttagcta cggattattg tgttaaaaca acggttttgc agttactcaa
    13201 aggcggtcgt tggcaggttg tcgtcaatga agcggcttgt cggggtattg cgccggaaac
    13261 catcgaaaca gcatggcagg aaatgcattc tgccggggca atcatcttaa aaaacgctga
    13321 tgaaataaat aaatatatta ataatcaata agttaaaatt gtttcacgtg aaaccccctt
    13381 cctaaatatg aaaattttgc ttgtccgctt gtctagtatg ggcgatttaa ttcacacttt
    13441 gcccgcaatc gaagatttgg cgcgacaatg tcctgatgta gaactgcatt ggctatgtga
    13501 ggctggattt gcagatattg cgcgcctgca tccgtttgta aaaaaaatcc atgtgatgaa
    13561 atggcggcaa tggcgcaaac atctctttcg ggctgaaact tggcgggaaa tgggtcatct
    13621 gaaacagact ttgcggcagg aagtatttga tttcgtattg gacagtcaag gtctgattaa
    13681 aagcgcgtgt ttcgctaaaa tggcgaaatc ccctatttat ggtttggata aaaacagtgc
    13741 gcgcgaggga tgggctgctt tggcgtatgt aaaaacatac gctgtaccga agggaaaaaa
    13801 tgccgtttgg cgcaaccgtg aactgtttgc ccaagtattt gggtatgtaa tgccggaaac
    13861 gcaggtattt ggcttgactg ttcctgaagc aggccgtctg aaaaatttag cgcagccgta
    13921 ttatgcggct ttgcatgcga ccagtcggga cagtaagtta tggcctgtgg aaaactggcg
    13981 gtcgttgctg caaaagttga atgaagaaca gcaatgcaat atttacctgc cttggggaaa
    14041 tgaagatgaa aaaacgcgtg ccaaacaaat tgcagacgga ctgccgtttg ctattgtgtg
    14101 cgacaaaata aatttattgc aggcagcgta tctgctgaaa tacgcggtcg gaattgtcgg
    14161 cgtggatacc ggtttgctgc atttggcaaa tgccttggaa aaacctgtgg tcggcattta
    14221 taccgatacc gatccgatta aaacaggcgt tcaggtttcg ccaattgcaa aaaatttggg
    14281 caatatcggg cagattccga ccgcagattt ggtttatcaa gcgctgatgg attgtgttgc
    14341 agcagacaaa ggctaaaggg ttgtctgaaa ctgatatggc ggcatgatat tttccaattt
    14401 attaaataca ggaatgtgta tccgctagtc tgagtaaatg ctttaaaaat ggtataatcg
    14461 gcaagcatta tccgaaagat ttttgaatga attcgttttt aaggaaaacg gatttggttt
    14521 tatagggaag aaggtttggt ttcgctggat ggtgaaagca gcgttctttt taggagggtt
    14581 caatgaaagc actggtcgca gtaaagcgcg tagtggacta caacgtcaaa gttcgtgtaa
    14641 aagccgatgg ttcggatgtg gatatcggca atgtcaaaat gtcgatgaat ccgtttgacg
    14701 aaatcgctgt ggaagaagcc gtccgtttga aagaagccgg aaaagtaagc gagatcgtag
    14761 cggtttcttt gggcgaaaag aaatgcgaag aaacgttgcg taccgctttg gcgatgggtg
    14821 ccgaccgtgc aattcatgtt gaaaccgatg cgaaattgga gccgctggca gttgccaagt
    14881 tgctgaaagc cgttgcggac aaagaaaatc cgcagatttt ctttttgggc aaacaggcga
    14941 ttgatgatga tgccaaccaa gtggcgcaaa tgctggctgc tttgctgaat gcggcgcaag
    15001 gtacgttcgc gtccaaagta caaattgaag gcgacgaagt gcagattgtg cgggaaatcg
    15061 atggcggcga agaaaccatc gcattgaaac tgcctgctgt tatcagtgct gatttgcgtt
    15121 tgaacgagcc gcgctttgtc aaactcccca atattatggc ggcaaagaaa aaacctctgg
    15181 aaaaactggc gcctgccgat ttggctaccg atattttacc tcgtctgaaa acggtgaaat
    15241 ttgccgaacc taaggcgcgt caggcaggcg taaaagtagc aagcgttgcc gaattggttg
    15301 aaaaattgaa aaacgaagcc aaagtgattt gaggaggctg aaatgagcgt attgattatt
    15361 gtcgaacacg acaacaaaca gttgaatcct accactttgc atgctgttac cgctgccgcc
    15421 aagctgggta aagtcgattt attggttgcc ggaagcggtg catctgccgt agtagagtcc
    15481 gcaaaacaag tggcgggtgt ggaaaaagtt ttggttgcag atgctgccca ttatgccgaa
    15541 ggtttggctg aagagttggc tccgctggtt gttaaattgg cagcggatta ccgctatgtt
    15601 gcagcaacgg caaccacatt cggtaaaaac cttttgcccc gcgtagccgc cttattagac
    15661 gtaccgcaaa tttctgattt gaccgagatt gtagataaca cgacttttgt acgtccgatt
    15721 tatgcaggta atgcatttga aaccgtgcaa gccaatgcgg aaaaattggt gctgaccttc
    15781 cgtgcgacgg cttttgacgc agcggcggtg caaggtggta atgctgaggt aattaatatt
    15841 gaaacaaccc ctgcccaaaa cctgagtcgt tttgttaacc gtcagctttc ccattccgat
    15901 cgtcccgaac tgactcaggc aaaagtgatt gtttctggtg gtcgtgcgtt gggtagtgcg
    15961 gaaaaattta atgaagtgct gacaccgttg gcggatgttt taggtgcggc aatcggtgca
    16021 tcccgtgcgg cagttgatgc cgaatatgcg ccaaacgatg ctcaagtcgg acaaaccggt
    16081 aaagtagttg cgccgcaact ctattttgca atcggtattt caggtgcgat tcaacacgtt
    16141 gccggtatgc aagacagtaa ggtgattgtt gcaatcaata aagatgctga tgcgccgatt
    16201 ttcaatgtag ccgattacgg attggttggc gatttatttg aaatcgttcc acaattaaca
    16261 gaagcattga aaaattaatg tttcacgtga aactttcaga cgactttgtt attaatgagg
    16321 ttgtctgaaa acttttcaac atgattacga cttataaaac cattacttcc ccgacgcagg
    16381 ctgggtttaa agataaaggc agccgtttta tcgcatttgc ctatccgatt cggacattgg
    16441 ctgatgtgaa aaaatacctc gatccgttaa aggaagagca ccataaagca cgacactggt
    16501 gttatgccta tcgtttgggc gtggatggta tgcaatttcg tgccaacgat gatggagagc
    16561 catcaggaag tgctggacga ccaatttggg gacagattga ttcggtgggc atcaccgatg
    16621 ttttggtcgt ggtcgtccgc tatttcggtg gtactttatt gggcgtttca ggtctgatac
    16681 atgcgtacaa agaggcgacg gctcaggcgt tggcgattgc ggaagtgatt gaaaagaata
    16741 ttgaaaaaac cgtttggctg aaatgtgaat atccattttt gaatgaagcg atacgcatcg
    16801 ccaaacaata tcaggcggat atattggagc aggatttgca gttggattgc cgattgacgg
    16861 taagtttgtc gttggcaaat tatgaagtct gtgttgcggc ttggaagaat acacggcaga
    16921 ttgaagtaaa tacggaaaag ccttttgaat gaaaggtcgt ctgaaatgct ttgtgatggt
    16981 atttcagacg acctcttcgc tgactaatct tcttgtgtat atttgtctaa ggcatcgacg
    17041 ctggagcgca aatataacca agccagttga tggaattcgc ccagcgcgtt ccatagcgca
    17101 tcttcactca taatgctgta ttcgccttct gtgcgcaaat ccacctccgc tccatcttca
    17161 atagcccgat gacaagcctg atattcgtgg gtataaaaat tgtccatatc gcgaatcaaa
    17221 gcgacggcat gtttccaacg gcggatgtct tcttccaatt gcggtagtaa atgacaccat
    17281 tcgcggtatt tgctttggat ttcatcaata cgtttttgca tggttgcttg tcctttttta
    17341 atttgtgaat aagttgaata ggttgcagag tggaatgaag cggtcttttg tttgatttta
    17401 ctaaaatttc ttcagatggg ataaaagtcc ctttgtatcg agttttcgtt aaaagtacat
    17461 atttgtcaag gagatggcat gaaactgctg gttatcggta atggtggtcg cgaacacgcg
    17521 ctggcttgga aattggcgca gtcgcctaaa gtggaaacag tatttgttgc gcctggtaat
    17581 gccggtacag cgattgaacc caagttgcaa aacatcgact tgactgcgca tcaggatttg
    17641 attgaattct gtcgtaaaga aaatattgtt tttactgtcg tcggccctga agcgcctttg
    17701 gcggcaggtg ttgtggatga tttccgtgcc gcaggactaa aaatattcgg tccgacacaa
    17761 tatgcggcgc agttggaaag ttccaaagat ttcgccaaag catttatggc gaaatacaat
    17821 attccaaccg cgcaatatca aacctttgaa aacgccgatg ccgcacatga ttacgtcaat
    17881 cagaaaggtg cgcctatcgt tatcaaagcc gatggtttgg cggcaggtaa aggcgtgatt
    17941 gtggcgatga ctttggatga agcgcatgct gcgattgatg atatgctgct ggacaacaaa
    18001 atgggcaatg ccggcgcgcg tgttgtgatt gaagatttcc tgcaaggcga agaagcgagt
    18061 tttatcgtca tggttgatgg caataatgta ctgcctatgg caaccagcca agaccacaag
    18121 cgtcttttag acggcgacaa aggtctgaat acgggcggta tgggtgcgta cagccctgcg
    18181 cctgtggtaa cgcctgttgt gtacgaacgc gcgatgaatg aaattatttt gccgaccgta
    18241 gcagggatga aagcggaggg gcatgagttc accggtttcc tgtacgcagg tttgatgatt
    18301 gatcaaagcg gtgcacccta tacgattgag tttaactgcc gtttcggcga tcctgaaacc
    18361 cagccgatta tgagtcgtct gaacagcgac ttggcggatt tggttgaagc ggcaatagac
    18421 ggtaaacttg atagtgttgc tgccgaatgg aatccacaaa ctgccgtagg tgtagtgttg
    18481 gcggcgcaaa actatcctga aacgcctaaa aaaggcgatg ttatttccgg tctggatgct
    18541 gccaaccagg taggcaaagt tttccatgca ggtacaacgg caaacgagaa aggtgacgta
    18601 ttgaccaacg gcggacgcgt attgtgtgtt gtgggattgg gcgacaatgt ggcgcaagcg
    18661 aaagctaagg catatggcgc gttggaaaaa atcagcttcg acgggatgca ataccgtaaa
    18721 gacattgccg ataaagcgat taaccgttaa ttagaaagag gatgatgccg tctgaagcca
    18781 agtatgactg atatgcttca gacggcattt tatattatgt tatttccgag aattatcgct
    18841 gcatcagcgc aacgtaagtt aagcgtttat ttaaaaaaag gcggtttggt cgcttatccg
    18901 accgaatctt gttatggctt ggggtgtctt ccgacattag ccaaagcact cggtaagttg
    18961 gcgcatttga aaaaaagacc gcaacacaag ggtatgattg tcatcgggaa tcaatttgaa
    19021 caattgcagc ctttacttca aatgccgtct gaaaatcttc aggatatgct tagaaaagaa
    19081 tggcccgccc ctaaaacgtt cctattatcc gccaaatcct gtgtcttacc tgagttgcgc
    19141 gggaaacagc gcagcaagtt ggcggtcagg gttcccgccc atgtaggtgc gcgccgcttg
    19201 tgtcaggctt tgcaaacgcc tttggtttcg acttcgtgca accgcgcagg caaacgcgcg
    19261 tgtcggacgg agagggaagt cagaaggcaa ttcggacgcg atgtgtggat tgttggtggg
    19321 agaatcggca ggcagaaatc gccgagtcag attattgacg gggaaacagg taaacgtttg
    19381 cgttgagacc tttgcaaaat tcctttccct cccgacagcc gaaactcaaa cacaggtttt
    19441 cagctgtttt cgccccaaat accgcctaat tctacccaaa taccccctta atcctccccg
    19501 gatacccgat aatcaggcat ccggtctcct tttaggcggc agcgggcgca cttagcctgt
    19561 tggcggcttt caacaggttc aaacacatcg ccttcagatg gctttgcgca ctcactttaa
    19621 tcagtccgaa ataggctgcc cgggcgtagc ggaatttacg gtgcagcgta ccgaagcttt
    19681 gttcgaccac ataacgggtc ttcgacaaat atcggttacg tttggtttgc g
//
LOCUS       DBBZXU010000028        19438 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.028, whole genome shotgun sequence.
ACCESSION   DBBZXU010000028 DBBZXU010000000
VERSION     DBBZXU010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.028"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(212..4381)
                     /locus_tag="ACJJDE_000865"
     CDS             complement(212..4381)
                     /locus_tag="ACJJDE_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translocation/assembly module TamB
                     domain-containing protein"
                     /protein_id="HGG7540815.1"
                     /translation="MTDTAPTDTDPTENGTRKMPSEHRPTPPAKKRRPLLKLSAALLS
                     VLILAVCFLSWLAGTESGLRFGLYQIPSWFGVNISSQNLKGTLLDGFDGDNWSIETEG
                     ADLKISRFRFAWKPSELMRRSLHITEISAGDIAIVTKPTPPKEERPPLSLPDSIDLPA
                     AVYLDRFETGKISAGKAFDKPTVYLERLDASYRYDIKGHRLDLKAADTPWSNSSGSAS
                     VGLKKPFALDTAIYTKGGLEGKTIHSTARLSGSLKDVRAELAIDGGNIRLSGKSVIHP
                     FAESLDKTLEEVLVKGFNINPSAFVPSLPDAGLNFDLTAIPSFSDGIALEGSLDLENT
                     KAGFADRNGIPVRQVLGNFVIRQDGTVHIGNTSAALLGRGGIRLSGKIDTEKDILDLN
                     IGINSVGAEDVLQTAFKGRLDGSIGIGGTTASPKISWQLGIGTARTDGSLAIASDPAN
                     GQRKLVLDTVNIAAGQGSLTAQGYLELFKDRLLKLDIRSRAFDPSRIDPQLPAGNING
                     SINLAGELAKEKFTGKMRFLPGTFNGVPIAGSADIVYESRHLPRAAVDLRLGRNIIKT
                     DGGFGKKGDRLNLNITAPDLSRFGFGLAGSLNVRGHLSGDLDGGIRTFETDLSGAARN
                     LHIGKAADIRSLDFTLKGSPDTSRPIRADIKGSRLSLSGGAAVVDTADLMLDGTGVQH
                     RIRTHAAMTLDGKPFKFDLDASGGINRELTRWKGSIGILDIGGAFNLKLQNRMTLEAG
                     AERVAASAANWQAMGGSLNLQHFSWDKKTGISAKGGAHGLHIAELHNFFKPPFEHNLV
                     LNGDWDVAYGRNARGYLNISRQSGDAVLPGGQALGLNAFSLKTRFQNDRIGILLDGGA
                     RFGRINADLDIGNAFGGNMANAPLGGRITASLPDLGTLKPFLPAAAQNITGSLNAAAQ
                     IGGRVGSPSVNAAVNVSSNYGKINGNITVGQSNSFSTSPLGGKLNLTVADAEVFRNFL
                     PVGQTVKGSLNAAVTLGGSIADPHLGGSINGDKLYYRNQTQGIILDNGSLRSHIAGRK
                     WVIDSLKFRHEGTAELSGTVGIENSGPDVDIGAVFDKYRILSRPNRRLTVSGNTRLRY
                     SPQKGISVTGMIKTDQGLFGSQKSSMPSVGDDVVVLGEVKKEAAAPLPVNMNLTLDLN
                     DGIRFAGYGADVTIGGKLTLTAQSGGSVRGVGTVRVIKGRYKAYGQDLDITKGTVSFV
                     GPLNDPNLNIRAERRLSPVGAGVEILGSLNSPRITLTANEPMSEKDKLSWLILNRAGS
                     GSSGDNAALSAAAGALLAGQINDRIGLVDDLGFTSKRSRNAQTGELNPAEQVLTVGKQ
                     LTGKLYIGYEYSISSAEQSVKLIYRLTRAIQAVARIGSRSSGGELTYTIRFDRFSGSD
                     KKDSAGNSKGK"
     gene            complement(4436..6283)
                     /locus_tag="ACJJDE_000866"
     CDS             complement(4436..6283)
                     /locus_tag="ACJJDE_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex family protein"
                     /protein_id="HGG7540816.1"
                     /translation="MHDTRTMMIKPTALLLPALFFFPHAYAPAADLSENKAAGFALFK
                     NKSPDTESVKLKPKFPVRIDTQDSEIKDMVEEHLPLITQQQEEVLDKEQTGFLAEEAP
                     DNVKTMLRSKGYFSSKVSLTEKDGAYTVHITPGPRTKIANVGVAILGDILSDGNLAEY
                     YRNALENWQQPVGSDFDQDSWENSKTSVLGAVTRKGYPLAKLGNTRAAVNPDTATVDL
                     NVVVDSGRPIAFGDFEITGTQRYPEQIVSGLARFQPGTPYDLDLLLDFQQALEQNGHY
                     SGASVQADFDRLQGDRVPVKVSVTEVKRHKLETGIRLDSEYGLGGKIAYDYYNLFNKG
                     YIGSVVWDMDKYETTLAAGISQPRNYRGNYWTSNVSYNRSTTQNLEKRAFSGGIWYVR
                     DRAGIDARLGAEFLAEGRKIPGSDIDLGNSHATMLTASWKRQLLNNVLHPENGHYLDG
                     KIGTTLGTFLSSTALIRTSARAGYFFTPENKKLGTFIIRGQAGYTLARDNADVPSGLM
                     FRSGGASSVRGYELDSIGLAGPNGSVLPERALLVGSLEYQLPFTRTLSGAVFHDMGDA
                     AANFKRMKLKHGSGLGVRWFSPLAPFSFDIAYGHSDKKIRWHISLGTRF"
     gene            6659..7888
                     /gene="sstT"
                     /locus_tag="ACJJDE_000867"
     CDS             6659..7888
                     /gene="sstT"
                     /locus_tag="ACJJDE_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0015826 - threonine transport [Evidence
                     IEA];
                     GO_process: GO:0032329 - serine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HGG7540817.1"
                     /translation="MAFGKSLFHAIGRVSLVRQIAAGLALGIVIGSVSPQLGLAAGLF
                     GSLFVGALKAVAPVLVFILVAATIAQHQKGNKAHIRPIIVLYLIGTFSAALTAVIAGM
                     VFPTHIVLAGAGDVSAAPPSGIVEVLKSLLMNLVANPINAIANANYIGILAWALVLGA
                     ALRNHGSDVTRQVVADLAEAVSTVVKWIIRFAPLGIFGLVSSTIAETGFGALAGYAKL
                     LAVLLGCMAFIALVVNPAIVWWKIRRNPYPLVFTCLRESGVYAFFTRSSAANIPVNMA
                     LAKKLGLHEDTYSISIPLGATVNMGGAAITITVLAMAAAHTQGIQVDFATALLLSLVA
                     TVSACGASGVAGGSLLLIPLACSLFGISNDVAMQVVAVGFIIGVIQDSAETALNSSTD
                     VLFTAAADLGRQRNRAE"
     gene            8005..9483
                     /locus_tag="ACJJDE_000868"
     CDS             8005..9483
                     /locus_tag="ACJJDE_000868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7540818.1"
                     /translation="MFKRSVIAMACIFALSACGGGGGGSPDVKSADTLSKPAAPVVSE
                     KETEAKEDAPQAGSQGQGAPSAQGGQDMAAVSEENTGNGGAAATDKPKNEDEGAQNDM
                     PQNAADTDSLTPNHTPASNMPAGNMENQAPDAGESEQPANQPDMANTADGMQGDDPSA
                     GGENAGNTAAQGTNQAENNQTAGSQNPASSTNPSATNSGGDFGRTNVGNSVVIDGPSQ
                     NITLTHCKGDSCSGNNFLDEEVQLKSEFEKLSDADKISNYKKDGKNDGKNDKFVGLVA
                     DSVQMKGINQYIIFYKPKPTSFARFRRSARSRRSLPAEMPLIPVNQADTLIVDGEAVS
                     LTGHSGNIFAPEGNYRYLTYGAEKLPGGSYALRVQGEPSKGEMLAGTAVYNGEVLHFH
                     TENGRPSPSRGRFAAKVDFGSKSVDGIIDSGDGLHMGTQKFKAAIDGNGFKGTWTENG
                     GGDVSGKFYGPAGEEVAGKYSYRPTDAEKGGFGVFAGKKEQD"
     gene            complement(9558..9773)
                     /locus_tag="ACJJDE_000869"
     CDS             complement(9558..9773)
                     /locus_tag="ACJJDE_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540819.1"
                     /translation="MFKLGVYACLGLFAGWVLLLIVQLWFSFLKAELFFKITLTMAGL
                     FVIILAALLVFGQYFSEKKMKDDGFIN"
     gene            complement(9766..9982)
                     /locus_tag="ACJJDE_000870"
                     /pseudo
     CDS             complement(9766..9982)
                     /locus_tag="ACJJDE_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242091.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4177 domain-containing protein"
     gene            complement(10057..11400)
                     /gene="argG"
                     /locus_tag="ACJJDE_000871"
     CDS             complement(10057..11400)
                     /gene="argG"
                     /locus_tag="ACJJDE_000871"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HGG7540820.1"
                     /translation="MNQNHTILQNLPVGQKVGIAFSGGLDTSAALLWMKLKGALPYAY
                     TANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAHEGIAAIQCGAFHVSTGGIAY
                     FNTTPLGRAVTGTMLVSAMKEDDVNIWGDGSTYKGNDIERFYRYGLLTNPALKIYKPW
                     LDQQFIDELGGRHEMSEFLIANGFNYKMSVEKAYSTDSNMLGATHEAKDLEFLNSGIK
                     IVKPIMGVAFWDENVEVSPEEVSVRFEEGVPVALNGKEYADPVELFLEANRIGGRHGL
                     GMSDQIENRIIEAKSRGIYEAPGMALFHIAYERLVTGIHNEDTIEQYRINGLRLGRLL
                     YQGRWFDSQALMLRETAQRWVAKAITGEVTLELRRGNDYSILNTESPNLTYQPERLSM
                     EKVEDAAFTPLDRIGQLTMRNLDITDTRAKLGIYSQSGLLALGEGSVLPQLGNKQ"
     gene            11525..12325
                     /locus_tag="ACJJDE_000872"
     CDS             11525..12325
                     /locus_tag="ACJJDE_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HGG7540821.1"
                     /translation="MNAFNLIIIGDEILHGSRQDKHFVFFKSLLESKGLKLNQVQYLP
                     DEPDLLVRQLRRSFSDGIPTFVTGGIGATPDDHTRQAAAAALELPVVRHPEAAKFIEG
                     VTLKRGEPLDSPEHAQRLKMADFPEGAELVPNPFNNIAGFSIREHYFFPGFPVMAHPM
                     AEWVLDTYYVGRFNQTKRGSRSVYVFEQPESRITPLMEHIEQTYPGVRSYSLPSVGWT
                     HSDGTQVKPHIEFGIKAEGEAVNLLDAAWAEVLHSLDGLGAELKNRVN"
     gene            12365..13351
                     /locus_tag="ACJJDE_000873"
     CDS             12365..13351
                     /locus_tag="ACJJDE_000873"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S49 family peptidase"
                     /protein_id="HGG7540822.1"
                     /translation="MQYRIRRENEAPEAKNAGETLWERDIMREVLLSAYRDRRRERMW
                     KNIWRAVSTLILVALIAGIFQKDEAALQLAGNTPHTAVVNLYGEIGNGVEDQVKKLKD
                     GMEAAYKNPQAKAIIIRANSPGGSPVVSNTAFEEIRRLKAQHPGIPVYLVAEDMCASG
                     CYYIAAAADKIYADPSSIIGSIGVIGSSFDATGLMEKIGVKRRVKIAGSNKGMGDPFS
                     PETPEQSKIWEEMLTGIHGEFIKAVKTGRGDRLKFRQYPDVFSGRVYTGADALKVGLV
                     DGLGNIYSVARDVVKAPDVVDYTPKDDFGRILGRRFGAELKASVREALQAVR"
     gene            14008..14270
                     /locus_tag="ACJJDE_000874"
                     /pseudo
     CDS             14008..14270
                     /locus_tag="ACJJDE_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021111752.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(14308..14682)
                     /locus_tag="ACJJDE_000875"
     CDS             complement(14308..14682)
                     /locus_tag="ACJJDE_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7540823.1"
                     /translation="MIIQNEFNLYPSNMLPERFCYPEKYVRISNDTSLIPYIQPHNFH
                     WWFENYGTEGAEVAYIFRNSILPDLNLIPFASNGEWEAYFDGNDVTGNSRVIVINLDN
                     IENHEFFNSFEDWLELAIKDTW"
     gene            complement(14679..14807)
                     /locus_tag="ACJJDE_000876"
     CDS             complement(14679..14807)
                     /locus_tag="ACJJDE_000876"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540824.1"
                     /translation="MPQTWGEAIQFRIKKQIENELAPPNWSTQFPNGSIYDPKVTK"
     gene            complement(14855..15211)
                     /locus_tag="ACJJDE_000877"
     CDS             complement(14855..15211)
                     /locus_tag="ACJJDE_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMP12 family DNA mimic protein"
                     /protein_id="HGG7540825.1"
                     /translation="MNEHNLLIFCLKDNVSISEYTEMIDWAYKNIQSETVVEITENQI
                     IEYQNRGLWRLVSEITDNWLFGPSEGDWLIDKESILAVKEKLQNSDFSTEPLVKNIIH
                     VLEYAIKNEKTVIFHF"
     gene            complement(15216..15320)
                     /locus_tag="ACJJDE_000878"
     CDS             complement(15216..15320)
                     /locus_tag="ACJJDE_000878"
                     /inference="COORDINATES: protein motif:HMM:NF018014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540826.1"
                     /translation="MDDIRGIIQGAVNPLIYKVSKQKIIYNNKLISGT"
     gene            complement(15354..15698)
                     /locus_tag="ACJJDE_000879"
     CDS             complement(15354..15698)
                     /locus_tag="ACJJDE_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540827.1"
                     /translation="MNLENYENILIKLLFYHNNLVNEYSYFIENKNLFKIVSRTKTSK
                     GFFFTIEKPLNFLSKKTYFEFNFKYLHSGKERFGSFMCWINTNLMEFEGVFFNDLLPD
                     NMIINNFFEIND"
     gene            complement(15857..16258)
                     /locus_tag="ACJJDE_000880"
     CDS             complement(15857..16258)
                     /locus_tag="ACJJDE_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540828.1"
                     /translation="MKLKSLDFPTGYFYFDNAAINSDKVEVIAVGYRNTDKTIKIFIE
                     DVIHFRVVDESYFIDTFMDLISEDADRALLHENGGQSFFELLDECYAEWILKESYFPL
                     NREFFKYYIFMFEQTFIEIIGSSATYSIIEG"
     gene            complement(16262..16714)
                     /locus_tag="ACJJDE_000881"
     CDS             complement(16262..16714)
                     /locus_tag="ACJJDE_000881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540829.1"
                     /translation="MQTKALGTVDEIGDTVQQVGKQASGQKTSGGNPAIDSDPYSPSS
                     VAARIEAGKARSDLQIKDILSNTTQRSKTKGPAVQYDKVGDYNDALNDFNSLNVRNVQ
                     TRPNGTITGNLPDGRAVNARNDSSGGEPTLEITISNNRKIKIRYGNTR"
     gene            complement(16709..17002)
                     /locus_tag="ACJJDE_000882"
                     /pseudo
     CDS             complement(16709..17002)
                     /locus_tag="ACJJDE_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(17072..17389)
                     /locus_tag="ACJJDE_000883"
     CDS             complement(17072..17389)
                     /locus_tag="ACJJDE_000883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540830.1"
                     /translation="MKKNIFHNVSLYEIIFSDNGNTLTLSFTDTIEGNYFGYIKCSNI
                     LNFKLDTNNFVDYEDKEDSLFPLFIPEIELYKYQFYSEIIIDVGIIIKISAETINFEP
                     LGK"
     gene            complement(17386..17646)
                     /locus_tag="ACJJDE_000884"
     CDS             complement(17386..17646)
                     /locus_tag="ACJJDE_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HGG7540831.1"
                     /translation="MRPTTRDELRQALQEQGFRRTGSDAAQYETWKGPDGVKIDIRPN
                     GEVIRTQRVPRTDGVQGKYPQRQDYEGNPLPNNHHHSGYFVK"
     gene            complement(17644..17988)
                     /locus_tag="ACJJDE_000885"
                     /pseudo
     CDS             complement(17644..17988)
                     /locus_tag="ACJJDE_000885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225727.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI.; internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
     gene            complement(18414..18758)
                     /locus_tag="ACJJDE_000886"
     CDS             complement(18414..18758)
                     /locus_tag="ACJJDE_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540832.1"
                     /translation="MIIEHNGNIHKIARMTGNKNNFLEIILSDIHENIKIKPLTIKVK
                     GENVINILPEEVSFYVKQGVDLIYEKYKRKFFISEISFCQSDSRPSSIYAFLTFHLLE
                     DIIKNESPSNYT"
     gene            complement(18796..19140)
                     /locus_tag="ACJJDE_000887"
     CDS             complement(18796..19140)
                     /locus_tag="ACJJDE_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540833.1"
                     /translation="MFLDDVNVFLDDLNVFLDDLNTNPITDEWYMSNFADKHIKILES
                     YEAFDILKQFVDYMIEEYDEKSEYEIMEILRQLKYQADTNEKFYTNTQKQKIVELYKQ
                     EISQDILNEIFR"
     gene            complement(19143..>19438)
                     /locus_tag="ACJJDE_000888"
     CDS             complement(19143..>19438)
                     /locus_tag="ACJJDE_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540834.1"
                     /translation="DGEMAGGNKSLKIGTQSVEKSTGRTIPNNLKEQLAMEEVKANPQ
                     GKTPARIPPMSDTKNGWLAKDGWVKRVQNVNKIEIHYIENSRTGEKTDFKFKD"
BASE COUNT         4583 a         4601 c         5033 g         5221 t
ORIGIN      
        1 cttagctcaa agagaacgat tctctaaggt gctcaagcac cgagtgaatc ggttccgtac
       61 tatttgtact gtctgcggct tcgtcgcctt atcctgattt ttgttaattc actatatcga
      121 ttctgttccc ttgcaggcgg acggcggcgg cggacggtgg aaaagcaggt tttcaaatgt
      181 ccggtttggc ggcgcgccgt ctgaaaaccg cttattttcc tttgctgttt ccggcggagt
      241 cttttttgtc cgaaccggag aagcggtcga aacgtatggt gtatgtcagc tcgccgcccg
      301 acgaacggct accgatacgg gcaaccgcct gtatggcgcg ggtcagccgg taaatcagtt
      361 tgacggactg ttccgcgctg gagatgctgt attcgtagcc gatgtagagt ttgccggtca
      421 gttgtttgcc gacggtcagc acctgttcgg cggggttgag ttcgccggtt tgcgcgttgc
      481 ggctgcgctt gctggtaaag cccaaatcat ccaccagccc gatgcggtcg ttgatttgcc
      541 cggcaagcag cgcgccagcg gctgcggaca gggcggcatt gtcgccgctg ctgccactgc
      601 cggcgcggtt gaggatgagc caggagagct tgtctttttc actcatcggt tcgtttgccg
      661 tcagcgtaat gcgcggactg ttgaggctgc ccaatatttc cacgcccgca ccgacggggg
      721 aaaggcggcg ttcggcgcgg atgttgaggt tggggtcgtt gagcgggccg acaaaggaga
      781 ccgtgccttt ggtaatgtcc aaatcctgcc cgtatgcctt ataacgccct ttgatgacgc
      841 ggaccgtgcc cacgccccgc acgcttccgc ccgattgggc ggtcagggtc agtttgccgc
      901 ctatggtaac gtccgcgccg tagccggcga agcggatgcc gtcattgagg tctaaagtca
      961 ggttcatatt gacggggagc ggtgccgccg cctctttttt gacttcgcct aatacgacga
     1021 catcgtcgcc gacggacggc atcgaggatt tttgcgaacc gaacagcccc tgatccgttt
     1081 taatcatccc ggtaacggat atgccttttt gcggcgaata gcgcaggcgg gtgttgccgg
     1141 aaaccgtcag gcggcggttg gggcgggaca ggatgcggta tttgtcgaac accgcgccga
     1201 tatcgacatc gggtccgctg ttttctatac cgaccgtacc ggagagttcc gccgtccctt
     1261 cgtgccggaa tttcaggctg tcgattaccc atttcctgcc cgcgatatgc gaacgcagcg
     1321 agccgttgtc caagatgatg ccttgggttt ggttgcggta atagagtttg tcgccgttga
     1381 tgctgccgcc caagtgcgga tcggcgatgc tgccgccgag ggttacggcg gcattcaggc
     1441 tgcctttgac ggtttgtccg acgggcagga agttgcggaa tacttcggca tcggcaacgg
     1501 tcaggttgag tttcccgccc aggggcgagg tactgaaaga attactttgc ccgacggtga
     1561 tgttgccgtt gattttcccg tagttgctgc tgacgttgac ggcggcattg acggacggag
     1621 agccgacccg tccgccgatt tgcgcggcgg cattcaggct gccggtaatg ttttgcgcgg
     1681 cggcgggcag aaagggcttc aatgtgccca agtcgggaag ggaggcggta atcctgccgc
     1741 cgagcggtgc atttgccata ttgccgccga aggcgttgcc gatgtccaaa tcggcgttaa
     1801 tccgcccgaa acgcgcgccg ccgtcaagca ggattccgat acggtcgttt tgaaagcgcg
     1861 ttttcaggga aaatgcgttc aaacccaaag cctgcccgcc gggcaatacg gcatcgccgc
     1921 tttgccggct gatattgagg tagccgcgcg cgttgcgccc gtaggcaaca tcccagtcgc
     1981 cgtttaaaac cagattgtgt tcgaagggcg gtttgaagaa attgtgcaac tcggcgatat
     2041 gcagaccgtg tgcgccgcct tttgccgata tgccggtttt tttatcccaa gaaaagtgtt
     2101 gcaggttgag gctgccgccc attgcctgcc aatttgccgc acttgccgcc acgcgttccg
     2161 caccggcttc gagcgtcata cggttttgca gcttgaggtt gaatgcgccg ccgatgtcga
     2221 ggatgccgat gctgcctttc catcgggtaa gttccctgtt gatgccgcct gaagcgtcca
     2281 aatcgaattt gaacggtttg ccatccagcg tcatggcggc gtgtgtgcgg atgcggtgct
     2341 gcacgcccgt gccgtccagc atcaggtcgg cggtatcgac aaccgccgct ccgcccgaca
     2401 gcgaaaggcg gctgcctttg atgtcggcgc gtatcgggcg gcttgtgtcg ggcgaacctt
     2461 tgagcgtgaa atcgagcgaa cggatgtctg ccgccttgcc gatgtgcagg ttgcgcgccg
     2521 cgccggaaag gtcggtttca aaggttcgga tgccgccgtc caaatcaccg gaaaggtgtc
     2581 cgcgtacatt taaagacccc gcgagtccga aaccgaaacg ggataaatcg ggtgcggtga
     2641 tattgaggtt aagccggtcg ccttttttgc cgaagccgcc gtctgtttta ataatgttcc
     2701 gccccagccg caaatcgacg gcggcacgcg gaaggtggcg ggactcgtaa acaatgtcgg
     2761 cactgccggc aatcggtacg ccgttgaacg tgccgggtaa aaaccgcatt ttgcctgtga
     2821 atttctcttt tgccagttcg ccggcaaggt ttattgagcc gttgatattg cctgccggaa
     2881 gttgcggatc gatgcgcgaa gggtcgaatg cgcgggaacg gatgtccagc ttgagcaggc
     2941 ggtctttaaa cagctcgaga tagccttgcg cggtcaggct gccttgcccg gcggcgatgt
     3001 tgacggtgtc gagcaccagt ttccgctgtc cgtttgcggg gtcgcttgca atggcgaggc
     3061 tgccgtccgt gcgcgctgtg ccgatgccga gttgccaaga gattttgggc gaggcggtcg
     3121 tgccaccgat gccgatgctg ccgtccaacc tgcctttgaa cgcggtttgc agcacgtctt
     3181 ccgcgccgac ggagttgatg cctatattta aatcgaggat gtctttttcg gtgtcgattt
     3241 tgcccgacag cctgatgccg ccccgtccga gcagggcggc ggacgtattg ccgatatgca
     3301 ccgtgccgtc ctgccggatg acaaagttgc ctaaaacctg acggacgggg atgccgttgc
     3361 ggtcggcaaa accggcttta gtgttttcca aatcgagcga gccttccagc gcgatgccgt
     3421 ctgaaaacga cgggatggcg gtcaggtcga aattcagccc ggcatcgggc agggaaggca
     3481 cgaaggcgga cggattgatg ttgaaccctt tgaccagtac ttcttccaat gttttatcca
     3541 atgattcggc aaacgggtgg atgacggatt ttcccgagag gcggatattg ccgccgtcga
     3601 tcgccagttc ggcgcgcaca tccttcaggc tgccgctcag ccgagccgta ctgtgtatgg
     3661 ttttgccttc gagtccgcct ttggtgtaaa tggcggtatc gagggcaaac ggttttttca
     3721 agccgaccga ggctgacccc gacgaattgc tccacggcgt gtcggcagcc ttcaggtcga
     3781 ggcggtgtcc tttgatgtca taacggtatg aagcatccag ccgttcgaga tagacggttg
     3841 gtttgtcaaa ggctttgcct gcgctgattt tgcccgtctc gaagcggtcg agatagacgg
     3901 cggcaggcag gtctatgctg tcgggaaggc tgagcggagg gcgttcttct ttaggcggag
     3961 tcggtttggt aacgatggcg atgtcgccgg cggaaatttc ggtgatgtgc aggctgcggc
     4021 gcatcagttc ggacggtttc cacgcgaagc ggaagcggct gattttaagg tctgccccct
     4081 cggtttctat cgaccagttg tcgccgtcga agccgtcgag cagcgtgcct ttgaggtttt
     4141 gggaggaaat gtttacgccg aaccaagacg ggatttggta cagcccgaaa cgcaaaccgg
     4201 attccgtacc ggcgagccag ctgaggaaac atactgccaa aatcaggaca gacagcagtg
     4261 ccgccgacag cttcagcagc gggcggcgtt tttttgccgg cggggtgggg cggtgttcag
     4321 acggcatttt gcgcgtgccg ttttcggtcg gatcggtatc tgtcggtgcg gtatcggtca
     4381 taatgtctgt ttcaaaatgg tttgctgtaa tgccgtctga agcggccgta tcggtttaga
     4441 agcgtgttcc caagctgatg tgccagcgga ttttcttatc gctgtgcccg taggcgatgt
     4501 cgaaggaaaa cggcgcaagc gggctgaacc agcgcacgcc cagtcccgaa ccgtgtttca
     4561 gcttcatacg tttgaaattg gcggcggcat cgcccatatc gtggaatacc gcgccggaaa
     4621 gggtgcgcgt aaacggcagt tggtattcca ggctgcccac caagagggcg cgttcgggca
     4681 ggaccgatcc gttcgggccg gcaagtccga tgctgtcgag ttcgtaaccg cgcacggaag
     4741 acgcgccacc gctgcggaac atcagccccg aggggacatc ggcattgtcg cgggcaaggg
     4801 tgtaacccgc ttgtccgcgt atgatgaacg tgccgagttt cttgttttcg ggcgtgaaga
     4861 aataacctgc gcgggcagag gtgcggatca gcgcggtgga ggacaggaat gtgcccaaag
     4921 tcgtaccgat tttgccgtcg aggtaatggc cgttttcggg atgcagcacg ttgttgagca
     4981 gctggcgttt ccaagaggcg gtcagcatcg tggcgtggct gttgcccaaa tcgatatccg
     5041 agccgggaat tttccggcct tctgcgagaa actctgcccc cagcctggca tcgatgcccg
     5101 cgcggtcgcg cacataccag atgccgccgg agaaggcgcg tttttcgagg ttttgggtgg
     5161 tcgaacggtt gtaggaaacg ttgcttgtcc agtagttgcc ccgatagttg cgcggctggc
     5221 tgatgccggc ggcaagcgtg gtttcgtatt tgtccatatc ccagacgacc gagccgatat
     5281 agcctttgtt gaagaggttg taatagtcgt aggcgatttt gccgcccaaa ccgtattccg
     5341 aatcgaggcg gatgccggtt tcgagcttgt ggcgtttgac ctcggttacg ctgactttga
     5401 cggggacgcg gtcgccttgg agacggtcga agtcggcttg tacggacgcg ccggaataat
     5461 gcccgttttg ttcgagtgcc tgttggaagt cgagcagcag gtcgaggtcg tagggcgtgc
     5521 ccggttggaa gcgcgccagg ccggagacga tttgttcggg gtaacgctgt gtgccggtga
     5581 tttcaaagtc gccgaaggcg atggggcggc cgctgtccac gacgacgttc aaatcgacgg
     5641 tggcggtatc ggggttgacg gccgcccggg tgttgccgag cttggcaagc gggtagcctt
     5701 tgcgcgttac cgcgccgagg acggaagttt tgctgttttc ccaactgtcc tgatcgaaat
     5761 cgctgcctac cggctgctgc cagttttcca gcgcgttgcg gtagtattcg gcgaggttgc
     5821 cgtctgaaag gatgtcgccg aggatggcga cgccgacgtt ggcgattttg gtgcgcgggc
     5881 ccggtgtgat gtgcaccgta taagctccgt ctttttccgt cagactgact ttgctgctga
     5941 aatagccttt gctgcggagc atcgttttaa cgttgtccgg tgcttcttcg gcgaggaagc
     6001 ctgtctgttc cttatccaaa acctcttcct gctgctgcgt gataagcggc aggtgttctt
     6061 cgaccatatc tttgatttca ctgtcctgcg tgtcgatgcg gacggggaat ttgggtttta
     6121 atttaactga ttcggtgtca gggcttttgt ttttgaacaa tgcgaaaccc gccgccttgt
     6181 tttcggaaag gtcggcggca ggcgcgtatg cgtgcggaaa gaaaaataaa gccggcagga
     6241 gcagggcggt cggtttgatc atcatggtac gggtgtcgtg catcggtgtg gcggatttcg
     6301 attctaacac tgttcggacg gggcgggacg cttcagacgg catactgccg ccggtatttc
     6361 ggaggttgcg gcccgccgga aatgtatctg cttgttttag ggtattttgt ttctaatccg
     6421 tatatggaaa acaggctgcg tttcggaata gtgccggaaa ataggcagga ttaaataaat
     6481 ttattttcgt tcaataaatt aaaccgttgc gccgaatgat aaagcaaagc ctgtccggca
     6541 ctgcataggg caaatcaatg caaccttaaa acacagccga aaaataaaaa aaacacagag
     6601 aatgagtttt cttttaaaat acaacatttt ttaacatatc acaacataag gaagaattat
     6661 ggcgttcggc aaatccttat ttcatgcgat cggccgcgtc agcctggtca ggcagattgc
     6721 cgccggtttg gcgttgggta tcgtaatcgg ttcggtttcc ccgcaactgg gcttggcggc
     6781 aggcttgttc ggcagcctgt ttgtcggcgc gctcaaagcg gtcgcgccgg ttttggtatt
     6841 tattttggtg gcggccacaa tcgcgcagca ccaaaaaggc aacaaggcgc atatcaggcc
     6901 gattatcgtc ctttacctca tcggtacgtt ttccgcagcc ctgaccgccg tcatcgctgg
     6961 tatggttttc ccgacgcaca ttgttttggc gggcgcgggc gatgtgtccg ccgcgccgcc
     7021 ttccggcatt gtggaagtat tgaaatcgct gctgatgaac ctggtcgcca acccgattaa
     7081 cgcgattgcc aatgccaact atatcggcat tttggcttgg gctttggttt tgggcgcggc
     7141 gttgcggaat cacggttcgg acgttacgcg gcaggtcgtt gccgatttgg cggaagcggt
     7201 ttccaccgtc gtgaaatgga ttatccgttt tgcccctttg ggcattttcg ggctggtgtc
     7261 gtccacaatc gcggagacgg gtttcggcgc gctggcgggt tatgcgaagc tgcttgcggt
     7321 actgttgggc tgtatggcgt ttatcgcgct ggtggtcaat cccgccatcg tgtggtggaa
     7381 aatccgccgc aacccttatc cgctggtgtt tacctgcctg cgcgaaagcg gcgtgtatgc
     7441 cttctttacc cgttcttccg ccgccaatat ccccgtgaat atggctttgg cgaaaaaact
     7501 ggggctgcac gaagacactt attcgatttc catcccgttg ggggcgaccg tcaatatggg
     7561 cggcgcggcg attacgatta ccgttttggc tatggcggcg gcgcacaccc aaggcataca
     7621 ggttgatttt gccaccgcgc tgctgttgag cctggtggcg acggtcagcg cgtgcggcgc
     7681 gtccggtgtg gcaggcggtt cgctgctgct gattccgctg gcgtgcagcc tgttcggcat
     7741 cagcaacgat gtcgctatgc aggtggtcgc cgtcggcttt atcatcggcg tgattcagga
     7801 ttcggcggaa acggcgttga attcttcaac cgacgttttg tttaccgctg ccgccgattt
     7861 gggccgacag agaaaccggg cggaataaac caagctatgc cgtctgaagc ccgttcggcg
     7921 ttcagacggc atatttttac aattttatag gcatacggcg gaaacaatgc cggctttgct
     7981 ttattgaata cgaaggagat gatgatgttt aaacgcagcg taatcgcaat ggcttgtatt
     8041 tttgcccttt cagcctgcgg gggcggcggt ggcggatcgc ccgatgtcaa gtcggcggac
     8101 acgctgtcaa aacctgccgc ccctgttgtt tctgaaaaag agacagaggc aaaggaagat
     8161 gcgccacagg caggttctca aggacagggc gcgccatccg cacaaggcgg tcaagatatg
     8221 gcggcggttt cggaagaaaa tacaggcaat ggcggtgcgg cagcaacgga caaacccaaa
     8281 aatgaagacg agggggcgca aaatgatatg ccgcaaaatg ccgccgatac agatagtttg
     8341 acaccgaatc acaccccggc ttcgaatatg ccggccggaa atatggaaaa ccaagcaccg
     8401 gatgccgggg aatcggagca gccggcaaac caaccggata tggcaaatac ggcggacgga
     8461 atgcagggtg acgatccgtc ggcaggcggg gaaaatgccg gcaatacggc tgcccaaggt
     8521 acaaatcaag ccgaaaacaa tcaaaccgcc ggttctcaaa atcctgcctc ttcaaccaat
     8581 cctagcgcca cgaatagcgg tggtgatttt ggaaggacga acgtgggcaa ttctgttgtg
     8641 attgacgggc cgtcgcaaaa tataacgttg acccactgta aaggcgattc ttgtagtggc
     8701 aataatttct tggatgaaga agtacagcta aaatcagaat ttgaaaaatt aagtgatgca
     8761 gacaaaataa gtaattacaa gaaagatggg aagaatgacg ggaagaatga taaatttgtc
     8821 ggtttggttg ccgatagtgt gcagatgaag ggaatcaatc aatatattat cttttataaa
     8881 cctaaaccca cttcatttgc gcgatttagg cgttctgcac ggtcgaggcg gtcgcttccg
     8941 gccgagatgc cgctgattcc cgtcaatcag gcggatacgc tgattgtcga tggggaagcg
     9001 gtcagcctga cggggcattc cggcaatatc ttcgcgcccg aagggaatta ccggtatctg
     9061 acttacgggg cggaaaaatt gcccggcgga tcgtatgccc tccgtgttca aggcgaacct
     9121 tcaaaaggcg aaatgctcgc gggcacggca gtgtacaacg gcgaagtgct gcattttcat
     9181 acggaaaacg gccgtccgtc cccgtccaga ggcaggtttg ccgcaaaagt cgatttcggc
     9241 agcaaatctg tggacggcat tatcgacagc ggcgatggtt tgcatatggg tacgcaaaaa
     9301 ttcaaagccg ccatcgatgg aaacggcttt aaggggactt ggacggaaaa tggcggcggg
     9361 gatgtttccg gaaagtttta cggcccggcc ggcgaggaag tggcgggaaa atacagctat
     9421 cgcccaacag atgcggaaaa gggcggattc ggcgtgtttg ccggcaaaaa agagcaggat
     9481 tgatgccgat gccgcctgaa gcgggggcgt tcagacggca ttgtgatgtt tggggtgggg
     9541 tccggttcaa gtccgcatca gttgataaac ccgtcgtctt tcattttctt ttcggaaaaa
     9601 tactggccga ataccagcag ggcagcgagg atgatgacaa acagtcccgc catagtcaga
     9661 gtgattttga aaaacaattc cgctttgaga aaagaaaacc agagttgcac aatcagcagc
     9721 agcacccagc cggcaaacag tccgagacag gcataaacgc cgagcttaaa cacgatcccg
     9781 ctccaaaatg acgacgtagg cctcgcgttt gaaaaacagc agcatacggc gcaaatcttt
     9841 ttccatcgtt acgacccgcc agccttcggg ggatttgttt gttgaggaac gcgctgaaat
     9901 tgacggggtt gacctttgcc gcgccgaaaa acaggctgga caacaggctt tcctgataaa
     9961 tgacgacttt gtattctttc ataggattcc ttttaacata agggatcatc ttttcagacg
    10021 accccttaag ttgctaatga tgcaaaacag caaaccttat tgcttattgc ccaactgcgg
    10081 caataccgag ccttcgccca atgccaataa accgctttgc gagtagatgc ccagtttggc
    10141 gcgggtgtcg gtgatgtcga ggttgcgcat agtcagttgt ccgatacggt cgagcggtgt
    10201 gaacgctgcg tcttcgactt tttccatact caggcgttcg ggttggtagg tcaggttggg
    10261 cgattcggtg ttcagaatcg agtagtcgtt gccgcgacgc aattcgaggg ttacttcgcc
    10321 ggtaatggct ttggcgaccc agcgttgggc ggtttcgcgc aacatgagtg cttggctgtc
    10381 gaaccagcgg ccttggtaga gcaggcggcc gaggcgcagg ccgttgatgc ggtattgttc
    10441 gatggtgtcc tcgttgtgga tgccggtaac caagcgttcg taggcgatgt ggaacaatgc
    10501 catgcccggg gcttcgtaga tgccgcgcga tttggcttcg atgatgcggt tttcgatttg
    10561 gtcgctcatg cccaagccgt ggcggccgcc gatgcggttg gcttcgagga agagttcgac
    10621 gggatcggcg tattctttgc cgttcagtgc aaccggcacg ccttcttcaa agcgcacgct
    10681 gacttcttcg gggctgactt cgacgttttc gtcccaaaag gcaacgccca taatgggttt
    10741 gacgattttg atgcccgagt tcaaaaattc caagtctttg gcttcgtggg tggcacccaa
    10801 catattggaa tcggtggagt aggctttttc caccgacatt ttgtagttga agccgttggc
    10861 aatcagaaat tcgctcattt cgtgacggcc gccgagttcg tcgataaatt gctgatcgag
    10921 ccagggtttg tagattttca gcgcgggatt ggtgagcaaa ccgtagcggt agaaacgctc
    10981 gatgtcgttg cctttgtagg tgctgccgtc gccccaaata ttcacatcgt cttctttcat
    11041 ggcggaaaca agcatcgtgc cggttacggc gcgacccaga ggcgtggtgt tgaaataggc
    11101 gatgccgccg gtggaaacgt ggaacgcgcc gcattggatg gcggcgatgc cttcgtgtgc
    11161 caactgcgcg cggcagtcga tcaggcgggc gttttccgca ccgtattcca ttgctttttt
    11221 gggaatggca ttgtagtcgt cttcgtcggg ctggccgagg ttggcggtgt aggcgtaagg
    11281 cagtgcgcct ttgagtttca tccacaacag cgcggcagag gtatcaagac cgccggagaa
    11341 agcgatgccg actttttgac cgacggggag gttttgtaaa atagtatggt tttggttcat
    11401 gaaaaaatcc tcggtagctt gaaaaatcaa agccattatc ttataaatag gaaatattgt
    11461 cagccatcat gccgtctgaa cgggtattcc gccgtttcag gcggtattta aaaccgaaaa
    11521 cattatgaac gcgttcaacc tcatcatcat cggcgacgaa atcttacacg gcagccgcca
    11581 agacaagcat ttcgtctttt tcaaatccct gctcgaatcc aaagggctga agctcaatca
    11641 ggtgcaatat ctgcccgacg aacccgattt gctggtcagg caactgcgcc gcagcttttc
    11701 agacggtata ccgacgtttg ttaccggcgg catcggtgct acgcccgacg accacacgcg
    11761 ccaagcggcc gccgccgctt tggagttgcc cgtcgtccgc catcctgaag ccgccaagtt
    11821 tatcgaaggc gtaaccctga aacgcggcga gccgctcgat tcgcccgaac acgcccaacg
    11881 cctgaaaatg gcagatttcc ccgaaggcgc ggaattggtg cccaatccgt ttaacaacat
    11941 cgccggattt tctatccgcg agcattattt tttccccggc ttccccgtga tggcgcaccc
    12001 gatggcggaa tgggttttgg atacttatta cgtcggccgc ttcaaccaaa ccaaacgcgg
    12061 cagccgcagc gtgtatgtgt ttgagcagcc cgaatcgcgc attacgccgc ttatggagca
    12121 tatcgagcaa acttatcccg gcgtgcgttc gtacagcctg cccagcgtcg gttggacgca
    12181 ttcagacggc acgcaggtca aaccgcacat tgagttcggc atcaaagccg aaggagaagc
    12241 cgtcaacctt ttggacgcgg cgtgggcgga agtgttgcac agcttggacg gattgggagc
    12301 agagctgaaa aatcgggtaa actgaaaacc gtttgcccaa atcggacgat atttaaggaa
    12361 aaccatgcaa taccgaatca gaagagaaaa cgaagcaccc gaagcaaaaa atgcggggga
    12421 aaccttatgg gagcgcgaca tcatgcgcga agtgctgctg tccgcctatc gggacaggcg
    12481 cagggagcgg atgtggaaaa acatctggcg cgccgtcagc accctgattc tggttgccct
    12541 gattgcaggc attttccaaa aagacgaagc cgcattgcag ttggcgggca acacgccgca
    12601 taccgcagtc gtcaacctgt acggcgaaat cggcaacggt gtagaagacc aggtcaaaaa
    12661 actcaaagac ggtatggagg ccgcctacaa aaacccgcag gcaaaagcca tcatcatccg
    12721 cgccaacagt ccgggcggct ctcccgtcgt atccaatact gcctttgagg aaatacgccg
    12781 tctgaaagcg caacatcccg gcatccccgt ttatctcgtg gcggaagata tgtgcgcgtc
    12841 cggctgctac tacatcgcgg cggcggcgga caaaatctat gccgacccgt ccagcatcat
    12901 cggcagcatc ggcgttatcg gcagcagttt cgacgcgacc ggcctgatgg aaaaaatcgg
    12961 cgtgaaacgc agggttaaaa ttgcaggcag caacaaaggc atgggcgatc cgttttcgcc
    13021 cgaaacgccc gaacagtcga aaatctggga agaaatgctg accggcatac acggcgagtt
    13081 catcaaagcc gtcaaaaccg gacgcggcga ccgcctcaaa ttccgacaat atcccgacgt
    13141 gttcagcggt cgcgtgtaca caggcgcgga tgcgctgaaa gtcgggctgg tggacggact
    13201 cggcaatatt tacagcgtgg cgcgagacgt ggtcaaagcc cccgatgtgg tggattacac
    13261 tccgaaggac gatttcggca gaatcttggg cagacgcttc ggcgcagaac tcaaagcaag
    13321 cgtgcgcgaa gccctgcagg ccgtccggta gcgttgttta cagtatttct aagggaatac
    13381 caaaataaaa atatacacaa aaacactcac ctccccagta tgctgccact aagtcagccg
    13441 cgtcactatt taccgtgcac ttaaagccgt aaaaggcagg ttgtccccgg gaggttttgt
    13501 gcatcctgat accgatcggt tgttgttgct caaaggacag aaggccgctg ataaacgaga
    13561 ttacctgttt gtcgctattg acgattttta tactctgcca ttttgccgga caaaaccgca
    13621 gacagtgctg ccaagtttct gaccgaacat ctgtccgacc cctgcttgta cctgattgag
    13681 tacgtttact ctgacaatga taggtaatat aaagagccgt ccaacatgct ttcggtgcag
    13741 cttgttatga taatgggatt ggttggaggc ttgcccgatt tgcttgtccg cagaccaacg
    13801 gtaaggcgga gcgggttatc cgtaccttga tggagatgtg gcatgaggaa cagtcgtttg
    13861 acagtccgga acatcggcaa aaggagttgt gctgctttat taatttaggg gctgccctag
    13921 atcactaggg aaattcaaat taagttagaa ttatccctat gagaaaaagt cgtctaagcc
    13981 ggtataaaca aaataaactc attttgttat cgtggctatg atgtattgga tgcgggcgaa
    14041 tttagccatt tccgtatcaa tcacagcaca cattttgccg aacgacaaaa ccatattaat
    14101 ggaactgaga acttttggaa tcaagcaaaa cgtcatttac gcaagtttaa cggcattccc
    14161 aaagcgcatt ttgagctgta tttaaaggag tgcgaatggc gttttaacaa cagtgaaata
    14221 aaagttcttg ttccatttta aaacaattag taaaatcgag tttatcctag ttgtccaggg
    14281 cagcctcatc tctttataga tagctgctta ccaagtatcc ttaattgcta attcaagcca
    14341 atcttcaaaa ctattaaaaa attcatggtt ttctatatta tctaaattaa tgacaataac
    14401 cctagaattt cctgttacat cattaccatc aaaataagct tcccattctc cattactagc
    14461 gaatgggata agatttaaat caggcaggat agaatttcta aatatataag ctacttctgc
    14521 cccttctgtt ccataattct caaaccacca gtgaaaatta tgtggctgaa tataaggtat
    14581 taaagatgta tcgttagaga tacgaacata cttttcagga taacaaaacc tttcaggaag
    14641 catattacta ggatataaat taaattcatt ttgaataatc atttcgttac cttaggatca
    14701 taaatactac cattaggaaa ctgggtagac caatttggtg gtgctagttc attttcaatt
    14761 tgttttttaa ttctaaattg aatagcttct ccccatgttt gcggcatcta atgctgcttg
    14821 ctctgcatca atattactaa aaattggatt agtctcaaaa atgaaaaatt actgtttttt
    14881 cattttttat agcatattca agtacatgaa taatattttt cactaagggc tctgtagaaa
    14941 aatctgaatt ttgtaatttt tcttttacag ccaaaatact ttccttatct attagccaat
    15001 ccccctcact tggtccaaat aaccaattat cggtaatttc agaaacaagt ctccataatc
    15061 cacgattttg atattcaata atttgatttt ccgtaatttc tacaactgtt tcagattgaa
    15121 tgtttttata agcccaatca atcatttcag tatattcact aattgaaaca ttgtctttta
    15181 aacagaaaat taacaggttg tgttcattca tttgtctaag ttcctgatat gagtttgttg
    15241 ttgtaaataa tcttttgctt gcttaccttg taaattaaag gattaaccgc accttggatg
    15301 atgccgcgaa tatcatccat acggttaccc caccaatttt tattggtgta tcgttaatca
    15361 tttatttcaa aaaagttatt tattatcata ttatcaggga gcaggtcgtt aaaaaaaacc
    15421 ccctcaaatt ccattaaatt agtatttatc cagcacataa acgaaccaaa gcgttctttc
    15481 cctgagtgta aatatttaaa attaaactca aaataagttt ttttgcttag aaaatttaat
    15541 ggtttttcta tagtgaaaaa aaagccctta ctcgttttcg ttcgagatac tattttaaat
    15601 aaatttttat tttcaataaa ataagaatat tcatttacta agttgttatg ataaaaaagt
    15661 aattttatta aaatgttttc ataattttct aggttcattt ctagctcaat ttaaaatgat
    15721 ttcattgttg ccgtaccaat gcgaaattta ccatcaacaa aatttccctt cactgataca
    15781 ggtacaccat caacttgggt agttttattt tcaggctgcc tgaaagaaag ataggcaact
    15841 tattactcat cttacgctag ccctcaataa ttgaatacgt tgcactagaa ccaattattt
    15901 ctatgaatgt ttgctcaaac ataaaaatat agtatttaaa gaattctcta ttcaaaggaa
    15961 aataactttc tttcagtatc cattccgcat aacactcatc aagaagttca aaaaaagatt
    16021 gaccaccatt ttcatgaagc aaagctctat ctgcatcttc cgaaattaaa tccataaaag
    16081 tatctataaa atacgattca tcaacaaccc taaaatgaat aacatcttca ataaaaattt
    16141 ttatggtttt atccgtattt ctataaccaa ctgctataac ttctacttta tcagagttta
    16201 ttgctgcatt atcaaaatag aaatagccag ttgggaaatc taagcttttt aatttcataa
    16261 tttatcgtgt atttccatat ctgattttta tttttcggtt attactaatt gttatttcaa
    16321 gtgttggttc tccaccacta ctatcattac gagcattaac cgcacgccca tcaggtaaat
    16381 tgcccgttat cgttccatta ggacgtgttt gtacatttcg aacattcaga ctattaaaat
    16441 catttagtgc gtcattgtaa tcccccactt tatcatactg aacagcggga ccttttgttt
    16501 tactcctttg agtagtattg ctcaaaatgt ctttgatttg taaatcactg cgcgccttac
    16561 cggcttctat gcgagctgcc acactactcg ggctataggg gtcgctatca atcgcaggat
    16621 taccaccgct ggttttttgt ccgctagcct gtttcccaac ctgctgtact gtatcgccaa
    16681 tttcatctac cgtacctaac gccttagtct gcatatggcg aacagcaggt tttttatagc
    16741 cggtattttt aacccaatcc catttggtcg ggttaagttc tactttttta cctctccaaa
    16801 ccgtacctgc ggcctctgct acggcaaggg cagtttgggc tgttgctgtt atattcggat
    16861 gggcatcagc ccattgtctg gcggaattga tgccgtcttt taccgcaaaa gcactgtcct
    16921 gtaatatgct cgcggcagca agttgtgctt ccgggcttaa ttttcctgaa ttattaatac
    16981 cttgtagagt ctgctgcgca gagatgtagc aactgtattt ttaccccgtc gggtaaaaat
    17041 acagttgcta cggctgctgg gaaagcagtt actattttcc cagtggctca aaattaattg
    17101 tttcagcaga tatttttata ataatcccta catcaataat aatttcacta taaaattggt
    17161 atttatatag ctctatttcg ggtataaaca agggaaacaa gctatcttcc ttatcctcat
    17221 aatctacgaa attatttgta tctaatttaa aattcaaaat attactgcat ttgatatatc
    17281 cgaaataatt accttcaatt gtatctgtaa aagataatgt aagggtattt ccattatcgg
    17341 aaaagattat ttcataaagg cttacattgt gaaaaatatt ttttttcatt tgacaaaata
    17401 tccagaatga tgatgattat ttggcaatgg attgccttca taatcttgtc gttgcggata
    17461 ttttccctgt acaccatcgg ttcgcggcac tctttgggtt cttataacct ctccatttgg
    17521 acgaatatct attttcacgc catcaggacc tttccatgtt tcatattgag ccgcatctga
    17581 accagtacgt ctaaaacctt gttcttgcaa tgcttgacgt aattcatctc gcgtagttgg
    17641 tctgatagat ttaacaactg gcttgtttcc tcctgccatc tcaccgtcca acgtctgcat
    17701 agggcgggca gcaggtgttt tatagccgtt atttttaacc caatcctatt tggtcgggtt
    17761 aagttctact tttttacctc tccaaaccgt acctgcggcc tctgctacgg caagggcagt
    17821 ttgggctgtt gcagttatat tcggatgggc atcagcccat tgtctggcgg aattgatacc
    17881 gtcttttacc gcaaaagtac tgtcctataa tgcgcttgcg gcagcaagtt gtgctttcgg
    17941 acttaaattt cctaaatcat taataccttg taaagtttgc tgcgcagaga tgtaggtcgg
    18001 atatttgtat ccgacaaaaa tatttgacgc atctatcgtt tccgaaatgc cgctgttgga
    18061 aaatgtcgga ttcgagaatc cgacctacgg ctatttcgtt taagtcataa atagccattc
    18121 atgttccttc tgaatttgct tttgctatcc ttagaaccaa tcatataaac attatcatca
    18181 ttaattaatg ttctaagttt atgaagcggt caaatctgtc aaactaccag agatgaagca
    18241 tatcctcctg gaagtaattc tgttcgtgct gtttccatat cttctttgcc atcatcagtt
    18301 acttctctgt ctaaataaaa tcttacgata agtttttgtc taatttcatc aaattctgcc
    18361 gtaattaatc ttatattgat atgaatacac ggttcatacc tgctattagc cagtcaggtg
    18421 tagttggatg gggattcatt tttaataata tcttcaagca agtgaaatgt aagaaaagcg
    18481 tagatacttg aaggccggct atctgattgg caaaaagaaa tttcggagat aaagaatttc
    18541 cgtttatatt tttcataaat taaatcaaca ccttgtttta cataaaaact aacttcctca
    18601 ggaaggatat ttataacatt ctctcctttt acttttatag ttaatggttt gatttttatg
    18661 ttttcatgaa tatctgatag gattatttct aaaaaattat ttttatttcc agtcattctg
    18721 gctattttat gtatatttcc attgtgttcg attatcattt tattttttcc aaggatttcc
    18781 ttctatattg atagtttatc taaagatttc atttaaaata tcctgactaa tttcttgttt
    18841 atataattct acaattttct gtttctgtgt atttgtataa aatttttcgt tggtatctgc
    18901 ttgatatttt aattgtctca atatttccat gatttcatat tctgattttt catcatattc
    18961 ttcaatcatg taatcaacaa attgttttag aatatcaaag gcttcgtaac tttccaaaat
    19021 tttaatatgt ttatcggcaa aattggacat ataccattcg tcagtgattg gattagtatt
    19081 taaatcatct aaaaaaacat ttaaatcatc taaaaaaaca tttacatcat ctaaaaacat
    19141 gactaatcct taaacttaaa atctgttttc tcaccggttc ttgagttttc aatgtaatgt
    19201 atttcaattt tgtttacgtt ttgaacacgc ttaacccaac cgtcttttgc taaccaacca
    19261 tttttagtat cggacatagg aggtattctc gcaggagttt tgccctgtgg gtttgcctta
    19321 acttcttcca ttgctaattg ttcctttaaa ttattaggta ttgtacgacc ggttgatttt
    19381 tcaacagatt gtgtccctat ttttaatgat ttgtttcccc cagccatttc cccgtcta
//
LOCUS       DBBZXU010000029        19052 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.029, whole genome shotgun sequence.
ACCESSION   DBBZXU010000029 DBBZXU010000000
VERSION     DBBZXU010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 19052)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19052)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19052
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.029"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..79)
                     /locus_tag="ACJJDE_000889"
     CDS             complement(<1..79)
                     /locus_tag="ACJJDE_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7540835.1"
                     /translation="MKPAVWAALLLCACTSNFGDREHQFL"
     gene            282..1610
                     /gene="miaB"
                     /locus_tag="ACJJDE_000890"
     CDS             282..1610
                     /gene="miaB"
                     /locus_tag="ACJJDE_000890"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HGG7540836.1"
                     /translation="MKKVFIRTFGCQMNEYDSDKMLAVLAEEHGGIEQVTQADEADII
                     LFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVV
                     FGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKY
                     CSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDF
                     ATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSA
                     MKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSF
                     VFIYSPRPGTPAANLHDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGI
                     SKKDPDQLQARTANNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKTVSI"
     gene            complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJDE_000891"
     CDS             complement(1695..3608)
                     /gene="dxs"
                     /locus_tag="ACJJDE_000891"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HGG7540837.1"
                     /translation="MNPSPLLDLIDSPQDLRRLDKKQLPRLAGELRAFLLESVGQTGG
                     HFASNLGAVELTIALHYVYDTPEDKLVWDVGHQSYPHKILTGRKNQMHTMRQYGGLAG
                     FPKRCESEYDAFGVGHSSTSIGAALGMAAADKLLGSDRRSVAIIGDGAMTAGQAFEAL
                     NCAGDMDVDLLVVLNDNEMSISPNVGALPKYLASNVVRDMHGLLSTVKAQTGKVLDKI
                     PGAMEFAQKVEHKIKTLAEEAEHAKQSLSLFENFGFRYTGPVDGHNVENLVDVLKDLR
                     SRKGPQLLHVITKKGNGYKLAENDPVKYHAVANLPKESAAQMPSEKEPKPAAKPTYTQ
                     VFGKWLCDRAAADSRLVAITPAMREGSGLVEFEQRFPDRYFDVGIAEQHAVTFAGGLA
                     CEGMKPVVAIYSTFLQRAYDQLVHDIALQNLPVLFAVDRAGIVGADGPTHAGLYDLSF
                     LRCIPNMIVAAPSDENECRLLLSTCYQADAPAAVRYPRGTGTGAPVSDGMETVEIGKG
                     IIRREGGKTAFIAFGSMVAPALAVAEKLNATVADMRFVKPIDEELIVRLARSHDRIVT
                     LEENAEQGGAGGAVLEVLAKHGICKPVLLLGVADTVTGHGDPKKLLDDLGLSAEAVER
                     RVRAWLSDRDAAN"
     gene            complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJDE_000892"
     CDS             complement(3693..4610)
                     /gene="xerC"
                     /locus_tag="ACJJDE_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HGG7540838.1"
                     /translation="MVLDGFAAHFDAYLENIVREGKSGHTVAAYRRDLEELFALLAQM
                     PSEDAGGVPQGLSQRDFTAALRRLSQRGLNARTLARKLSSWRQYCAWLVKRGLLHTDP
                     TADIKPPKQPERVPKALPQEWLNRMLDLPVDGGDPLAVRDHALFELMYGSGLRVSEIH
                     GLNADDVYLDEAWVHVTGKGRKQRQVPLVGKSVEALKNYLSLRQTASDGKALFTGRNG
                     TRLSQRQIQKRLAQWAAQNGDGRHVSPHMMRHSYAGHLLQASRDIRAVQELLGHSSLS
                     TTQIYTKLDFDHIARLYDEAHPRAKRQDE"
     gene            4804..5868
                     /gene="fba"
                     /locus_tag="ACJJDE_000893"
     CDS             4804..5868
                     /gene="fba"
                     /locus_tag="ACJJDE_000893"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219833.1"
                     /note="catalyzes the reversible aldol condensation of
                     dihydroxyacetonephosphate and glyceraldehyde 3-phosphate
                     in the Calvin cycle, glycolysis, and/or gluconeogenesis;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HGG7540839.1"
                     /translation="MALVSMRQLLDHAAENSYGLPAFNVNNLEQMRAIMEAADQVNAP
                     VIVQASAGARKYAGAPFLRHLILAAVEEFPHIPVVMHQDHGASPDVCQRSIQLGFSSV
                     MMDGSLMEDGKTPSSYEYNVNATRTVVNFSHACGVSVEGEIGVLGNLETGEAGEEDGV
                     GAVGKLSHDQMLTSVEDAVRFVKDTGVDALAIAVGTSHGAYKFTRPPTGDVLRIDRIK
                     EIHQALPNTHIVMHGSSSVPQEWLKVINEYGGNIGETYGVPVEEIVEGIKHGVRKVNI
                     DTDLRLASTGAVRRYLAENPSDFDPRKYLSKTIEAMKQICLDRYLAFGCEGQAGKIKP
                     VSLEKMANRYAKGELNQIVK"
     gene            6213..7037
                     /locus_tag="ACJJDE_000894"
     CDS             6213..7037
                     /locus_tag="ACJJDE_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="factor H-binding protein"
                     /protein_id="HGG7540840.1"
                     /translation="MNRTAFCCLSLTAALILTACSSGGGGVAADIGAGLADALTAPLD
                     HKDKSLQSLTLDQSVRKNEKLKLAAQGAEKTYGNGDSLNTGKLKNDKVSRFDFIRQIE
                     VDGQLITLESGEFQVYKQSHSALTALQTEQVQDSEHSGKMVAKRQFRIGDIAGEHTSF
                     DKLPEGGRATYRGTAFGSDDASGKLTYTIDFAAKQGHGKIEHLKSPELNVDLAASDIK
                     PDKKRHAVISGSVLYNQAEKGSYSLGIFGGQAQEVAGSAEVETANGIRHIGLAAKQ"
     gene            7177..7854
                     /gene="tsaB"
                     /locus_tag="ACJJDE_000895"
     CDS             7177..7854
                     /gene="tsaB"
                     /locus_tag="ACJJDE_000895"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HGG7540841.1"
                     /translation="MQADFNRPVLAVDTGTSYLSLALRADGETRLFHQEVGSRQSALI
                     LPEIRTLFRNAGITAADLGAIVYAKGPGAFTGLRIGIGVAQGLATPFDTPLIGIPTLD
                     AAASLPPPQSCILAAADARMGEVFYAWFDTLNRRRLSDYQVGRAADIRLPEGCAFSDG
                     IGSAFALEETPPFSGKPDMPTAADFLNLAAEGGFPAVAAAHAELLYVRNKIALTAKEQ
                     AERRARL"
     gene            7851..8291
                     /gene="rimI"
                     /locus_tag="ACJJDE_000896"
     CDS             7851..8291
                     /gene="rimI"
                     /locus_tag="ACJJDE_000896"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HGG7540842.1"
                     /translation="MNIRRAVYADCAALAALDAVCNPSAWTQRQFESALVSLSEQVFL
                     AEKDGGLAAFIVWQNLPDESELHLIATAPECRRQGIASALLEYWFAHLPEGTQRLLLE
                     VRAGNTAAQALYAAHGFSIAGRRKNYYRATDGQTEDAVLMEKIC"
     gene            8285..9019
                     /locus_tag="ACJJDE_000897"
     CDS             8285..9019
                     /locus_tag="ACJJDE_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7540843.1"
                     /translation="MLSARYLHLHEALGLGPMWLKQAAAVLPPKNTPATPAQARPQTV
                     RAAPIRPSQPHNGQARLETMKALETAAVPTRKPAPETETPLPGLSDGIAPVPAASGIT
                     KLAVVSLCPPIEDAVYGQLFHGKAGVLLDNILKAVGLDAAYVHKTSWVKTAAVGNPMP
                     SEQAVANALGQIARELDGCRAPAVLFLGQAFVQPERQTMIETLCGSRPFFIIDHPARL
                     LRQPELKARNWQVLKQLKHALQAGGS"
     gene            9081..9722
                     /gene="pyrE"
                     /locus_tag="ACJJDE_000898"
     CDS             9081..9722
                     /gene="pyrE"
                     /locus_tag="ACJJDE_000898"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004588 - orotate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HGG7540844.1"
                     /translation="MTDFRQDFLKFSLAQNVLKFGEFTTKAGRRSPYFFNAGLFNDGL
                     STLQLAKFYAQSIIESGIRFDMLFGPAYKGIILAAATAMMLAEKGVNVPFAYNRKEAK
                     DHGEGGVLVGAPLKGRVLIIDDVISAGTSVRESIKLIEAEGATPAGVAIALDRMEKGT
                     GELSAVQEVEKQYGLPVAPIASLNDLFILLQNNPEFGQFLEPVRAYRRQYGVE"
     gene            9796..10230
                     /locus_tag="ACJJDE_000899"
     CDS             9796..10230
                     /locus_tag="ACJJDE_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MJ0042-type zinc finger domain-containing
                     protein"
                     /protein_id="HGG7540845.1"
                     /translation="MPACFCPHCKTRLWVKETQLNVAQGFVVCQKCEGLFKAKDHLAS
                     TKEPIFNDLPEAVSDVKLVHRIGTRAIGKKQISRDEIAGILNGGTTLHDTPPATAATP
                     AAAPQVAVPPAAPARQEGFNWTIATLFALIVLIMQLSYLVIL"
     gene            10227..11537
                     /gene="argA"
                     /locus_tag="ACJJDE_000900"
     CDS             10227..11537
                     /gene="argA"
                     /locus_tag="ACJJDE_000900"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004042 - acetyl-CoA:L-glutamate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HGG7540846.1"
                     /translation="MIVPDLFVAHFREAVPYIRQMCGKTLVAGIDDRLLEGDTLNKLA
                     ADIGLLSQLGIRLVLIHGARHFLDRHAAAQGRTPHYCRGLRVTDETSLEQAQQFAGTV
                     RSRFEAALCGSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDTAALRF
                     QLDAGNIVWLPPLGHSYSGKTFYLDMLQTAASAAVSLQAEKLVYLTLSDGISRPDGTL
                     AETLSAQEAQSLAEHAGGETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNG
                     IGTSIAKEAFVSIRQAHSGDIPHIAALIRPLEEQGILLHRSREYLENHISEFSILEHD
                     GNLYGCAALKTFAEADCGEIACLAVSPQAQDGGYGERLLAHIIDKARSMGISRLFALS
                     TNTGEWFAERGFQTASEDELPETRRKAYRSNGRNSHILVRRLHR"
     gene            11633..13648
                     /locus_tag="ACJJDE_000901"
     CDS             11633..13648
                     /locus_tag="ACJJDE_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family protein"
                     /protein_id="HGG7540847.1"
                     /translation="MKSYPDPYRHFEDLDSAETQNFAAEANAETRARFLNNDKARALS
                     DGILAQLQDTRQIPFCQEHRARMYHFHQDTEYPKGVYRVCTAATYRSGYPEWKILFSV
                     ADFDELLGDDVYLGGVSHLVEQPNRALLTLSKSGGDTAYTLEVDLEAGELVEGGFHFP
                     AGKNHVSWRDENSVWVCPAWDERQLTESGYPREVWLVERGKSFEESLPVYQIDKDAMM
                     VNAWRYLDPQGSPIDLIEASDGFYTKTYLQVSSESEAKPLNLPNDCDVAGYLAGHLLL
                     TLRKDWNRANQSYPSGALVAVKLNRGELGAAQLLFAPDETQALESVETTKRFVVASLL
                     ENVQGRLKAWRFADGKWQEAELPRLPSGALEMTDQPWGGDVVYLAASDFTTPLTLFAL
                     DLNVMELTVMRRQPQQFDSDGINVQQFWTTSADGERIPYFHVGKNAAPDMPTLVYAYG
                     GFGIPELPHYLGSIGKYWLEEGNAFVLANIRGGGEFGPRWHQAAQGISKHKSVDDLLA
                     VVRDLSERGMSSPRHIGLQGGSNGGLITAAAFVCEPQSIGALVCEVPLTDMIRYPLLS
                     AGSSWTDEYGNPQKYEVCKRWLGELSPYHNLSDGIDYPPALITTSLSDDRVHPAHALK
                     FYAKLHETSAQSWLYSPDGGGHTGNGTQRESADELACVLLFLKEFLG"
     gene            complement(13762..14718)
                     /locus_tag="ACJJDE_000902"
     CDS             complement(13762..14718)
                     /locus_tag="ACJJDE_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7540848.1"
                     /translation="MNTAAIYRQYQTYVRSDKSGWALDGCSDSALIAQAKQPGLHLEM
                     CINRFDSGITLSRMRGGGTGAFPTEIHNFSHNCALFVMVSGQNRLQMGGREYRPSAGE
                     IWLVRGELADVSETLLPDNSGMCALHLDFSLEKLRRWHDEGLLDERLFSPQTIGRFAL
                     QRLAQNAAALTAAACPLLQRPFESDGFGLLADEAAALELSARLLRFTFRRHDNGYRRR
                     RIDEAADILQHEFARPLTIAEIARRVGLNECYLKRYFKAQTGETVAGCLRRLRLEHAL
                     ALIESGSTVQAAMHFCGYRHAGRFNEAFRRHYGFLPSDVKKC"
     gene            14954..15919
                     /locus_tag="ACJJDE_000903"
     CDS             14954..15919
                     /locus_tag="ACJJDE_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7540849.1"
                     /translation="MKPRFYWAACAVLLTACSPEPAAEKTVSAASASAATLTVPTARG
                     DAVVPKNPERVAVYDWAALDTLTELGVNVGATTAPVRVDYLQPAFDKAATVGTLFEPD
                     YEALHRYNPQLVITGGPGAEAYEQLAKNATTIDLTVDNGNIRTSGEKQMETLARIFGK
                     EARAAELKAQIDALFAQTREAAKGKGRGLVLSVTGNKVSAFGTQSRLASWIHGDIGLP
                     PVDESLRNEGHGQPVSFEYIKEKNPDWIFIIDRTAAIGQEGPAAVEVLDNALVRGTNA
                     WKRKQIIVMPAANYIVAGGSRQLIQAAEQLKAAFEKAEPVAAGKE"
     gene            complement(16226..16378)
                     /locus_tag="ACJJDE_000904"
     CDS             complement(16226..16378)
                     /locus_tag="ACJJDE_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540850.1"
                     /translation="MRFVVLASFSGRSCNESVIDFDVSLRLTALSLTLSHRERGRVAV
                     ASLFAA"
     gene            16409..16732
                     /locus_tag="ACJJDE_000905"
     CDS             16409..16732
                     /locus_tag="ACJJDE_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003775941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7540851.1"
                     /translation="MQNETINLKQHLAAIKEYWQPEIINRHGFQFRLVKLLGDYGWHT
                     HGYSDKVLFAVEGDMAVDFADGGSMTIREGEMAVVPKSVSHRPRSENGCSVVLIELSD
                     PSEAV"
     gene            16846..19023
                     /gene="tdfF"
                     /locus_tag="ACJJDE_000906"
     CDS             16846..19023
                     /gene="tdfF"
                     /locus_tag="ACJJDE_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010950972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent iron piracy receptor TdfF"
                     /protein_id="HGG7540852.1"
                     /translation="MTRFKYSLLFAALLPVYAQADVSVSDDPKPQESTELPTITVTAD
                     RTASSNDGYTVSGTHTPLGLPMTLREIPQSVSVITSQQMRDQNIKALDRALLQATGTS
                     RQIYGSDRAGYNYLFARGSRIANYQINGIPVADALADTGNANTAAYERVEVVRGVAGL
                     LDGTGEPSATVNLVRKRPTRKPLFEVRAEAGNRKHFGLGADVSGSLNAEGTLRGRLVS
                     TFGRGDSWRQRERSRDAELYGILEYDIAPQTRVHAGMDYQQAKETADAPLSYAVYDSQ
                     GYATAFGPKDNPATNWANSRHRALNLFAGIEHRFNQDWKLKAEYDYTRSRFRQPYGVA
                     GVLSIDHNTAATDLIPGYWHADPRTHSASVSLIGKYRLFGREHDLIAGINGYKYASNK
                     YGERSIIPNAIPNAYEFSRTGAYPQPSSFAQTIPQYGTRRQIGGYLATRFRAADNLSL
                     ILGGRYSRYRTGSYDSRTQGMTYVSANRFTPYTGIVFDLTGNLSLYGSYSSLFVPQSQ
                     KDEHGSYLKPVTGNNLEAGIKGEWLEGRLNASAAVYRARKNNLATAAGRDPSGNTYYR
                     AANQAKTHGWEIEVGGRITPEWQIQAGYSQSKTRDQDGSRLNPDSVPERSFKLFTAYH
                     FAPEAPSGWTIGAGVRWQSETHTDPATLRIPNPAAKARAADNSRQKAYAVADIMARYR
                     FNPRAELSLNVDNLFNKHYRTQPDRHSYGALRTVNAAFTYRFK"
BASE COUNT         4286 a         5881 c         5158 g         3727 t
ORIGIN      
        1 gcaggaactg atgttccctg tcgccaaaat tgctggtaca cgcacacagc agcaatgccg
       61 cccacacagc cggtttcata cacacctccc attaaagcca aacattatac agccgtcctg
      121 accgattaaa ttcatatttt aaaacaatat tctgtttaca aaacccacat cgtgctataa
      181 tccgcaccga ttttcagacg gcatcgtcat gccgtctgaa attttttcat tccaacaaca
      241 atcagccccg cgattacggc tgcctgagaa agacacaaac catgaaaaaa gtatttatcc
      301 gcaccttcgg ctgccagatg aacgaatacg acagcgacaa aatgctcgcc gtcctcgccg
      361 aagaacacgg cggcatcgaa caggttaccc aagccgacga agccgacatc atcttgttca
      421 acacctgctc cgtgcgcgaa aaagcgcaag aaaaagtctt ctccgatttg gggcgcgtgc
      481 gtccgctcaa agaaaaaaac cccggcctca tcatcggcgt tgccggctgc gtcgcctcgc
      541 aagaaggcga aaacatcatc aaacgcgcgc cttatgttga cgtggttttc ggcccgcaaa
      601 cgctgcaccg cctgcccaaa atgattgtgg acaaagaaac cagcgggctg tcgcaagtcg
      661 atatttcctt ccccgaaatc gaaaaattcg accacctgcc gcccgcccgc gtcgaaggcg
      721 gcgcggcatt tgtatcgatt atggaaggct gttccaaata ctgctcattc tgcgtcgtcc
      781 cctacacgcg cggcgaagaa ttctcccgcc cgctcaacga cgtattgaca gaaatcgcca
      841 accttgccca gcaaggcgtt aaagaaatca acctcttagg ccaaaacgtc aatgcctatc
      901 gcggcgaaat ggacgacggc gaaatctgcg acttcgccac cctgctgcgc atcgtccacg
      961 aaatccccgg catcgaacgt atgcgcttca ccaccagcca cccgcgcgag tttaccgact
     1021 cgattatcga gtgctaccgc gacctgccca aattggtttc ccacctgcac ctgccgattc
     1081 aaagcggttc cgaccgcgta ttgagcgcga tgaaacgcgg ctacaccgct ttggaataca
     1141 aatccatcat ccgcaaactg cgtgccatcc gtcctgattt atgcctgagc agcgacttta
     1201 tcgtcggctt ccccggcgag accgaacgcg agttcgagca aaccttgaaa ctggtgaaag
     1261 acattgcctt cgacttgagc ttcgtgttta tttacagtcc gcgccccggc acgcctgccg
     1321 ccaacctgca cgacgacacg ccgcacgaag aaaaagtgcg ccgcctcgaa gccttgaacg
     1381 aagtcatcga agccgaaacc gcgcgcatca accaaacgat gatcggcacg gttcaacgct
     1441 gcctggtcga aggcatctcc aaaaaagacc ccgaccaact gcaagcccgc accgccaaca
     1501 accgcgtcgt caactttacc ggcacgcccg atatgatcaa ccaaatgatc gatttggaaa
     1561 tcaccgaggc ctacaccttc tccctgcgcg gcaaaaccgt cagcatttga tttcccccgc
     1621 cgcaaaaatg ccgtctgaag cgtttcagac ggcattttgc cttgtatcgg cagacgacgg
     1681 cgcggccggg cggcttaatt tgccgcatcc cgatccgaca gccacgcgcg cacacgccgt
     1741 tccaccgctt cggcactcaa gcccaaatcg tctaaaagtt ttttcggatc gccgtgtccg
     1801 gttacggtat cggcaacgcc caaaagcaaa acgggtttgc agatgccgtg tttcgccaat
     1861 acttccagca ccgcgccgcc tgcgccgccc tgttcggcgt tttcttcaag ggtaacgatg
     1921 cggtcgtggc ttcgggcaag gcggacaatc aactcttcgt ctatcggttt gacgaagcgc
     1981 atatcggcga cggtggcgtt cagtttttcg gcaaccgcca atgcgggggc gaccatgctg
     2041 ccaaaggcaa tgaaggcagt tttcccacct tcgcggcgga taatgccctt gccgatttca
     2101 acggtttcca tgccgtctga aaccggcgcg cccgtacccg tgccgcgcgg atagcggacg
     2161 gcggcgggcg cgtctgcctg atagcaggtc gaaagcagca ggcggcattc gttttcatcg
     2221 ctcggcgcgg cgacaatcat attcggaatg cagcgcaaga agctcaaatc gtacaaaccg
     2281 gcgtgggtcg ggccgtccgc gccgacgatg cccgcgcggt cgacggcaaa caaaacgggc
     2341 aggttttgca gggcgatgtc gtgcaccagt tggtcgtagg cgcgttgtaa aaaggtggaa
     2401 taaatcgcca cgacgggctt catcccttcg caagccaaac cgccggcaaa ggtaacggcg
     2461 tgctgctcgg cgatgccgac atcgaaatag cggtcgggga atcgttgttc aaactcaacc
     2521 aagccgctgc cctcgcgcat ggcgggggta atcgcaacca gtcgggaatc tgccgccgcc
     2581 cggtcgcaca gccatttgcc gaacacttgg gtataggtcg gtttggcggc gggcttgggt
     2641 tctttttcag acggcatttg cgccgcgctt tctttaggca ggttggcgac ggcgtggtat
     2701 ttgacgggat cgttttcggc gagtttgtag ccgttgcctt ttttggtaat gacgtgcagc
     2761 aactgagggc ctttgcggct gcgcaagtct ttcaatacgt ccaccagatt ttcgacgttg
     2821 tgtccgtcca cggggccggt gtagcggaag ccgaagtttt caaacaaaga cagcgactgt
     2881 ttggcgtgtt cggcttcttc ggcaagggtt ttgattttgt gttcgacttt ttgggcaaac
     2941 tccatcgcgc cgggtatttt gtctaatacc ttgcccgttt gcgctttgac ggtactcaac
     3001 aggccgtgca tatcgcgcac gacgttgctg gcaaggtatt tcggcagcgc gccgacgttg
     3061 ggggaaatcg acatttcgtt gtcgttgagg acgaccagca aatccacatc catatcgcct
     3121 gcgcaattca aggcttcaaa cgcctgcccc gccgtcatcg cgccgtcgcc gatgatggcg
     3181 acgctgcggc ggtcgctgcc caagagtttg tctgccgccg ccatacccaa agccgcgccg
     3241 atggaagtgg acgaatgccc cacgccgaac gcgtcgtatt ccgactcaca acgtttcgga
     3301 aaacccgcca agccgccgta ttggcgcatc gtgtgcattt ggtttttcct gcctgtcagg
     3361 attttgtgcg gatagctttg gtgtccgaca tcccacacca gcttgtcttc gggcgtgtcg
     3421 tacacatagt gcagggcgat ggtcagttcg accgcgccca gattgctggc gaaatgaccg
     3481 ccggtctgcc cgacagattc cagcagaaag gcgcgcagct cgccggcaag gcgcggcagc
     3541 tgttttttgt ccagacggcg caaatcttgc gggctgtcaa tcaggtcgag tagggggctt
     3601 gggttcatgg tgtgtctttt ttatgtgtcg tccgggtgca acggtcaatt atatatcaag
     3661 agcgtgcggc tgacggctga ttttgccgta tgtcattcgt cctgccgctt ggcgcgcggg
     3721 tgggcttcgt catacaggcg ggcgatgtgg tcgaaatcga gtttggtgta aatctgcgtg
     3781 gtcgaaaggc tgctgtgtcc gagcagctcc tgcaccgccc ggatgtcgcg cgaagcctgc
     3841 aacaggtgtc cggcgtagct gtggcgcatc atatgcggcg aaacgtgcct gccgtcgccg
     3901 ttttgcgccg cccattgcgc caaacgtttt tggatttggc gttggctcag gcgcgtgccg
     3961 ttcctgccgg taaacagggc tttgccgtcc gatgccgtct gacgcagcga cagatagttt
     4021 ttcagggctt ccacgctttt gccgaccagc ggcacctgcc gctgcttgcg ccctttgccg
     4081 gtaacgtgta cccacgcctc gtccaaatag acatcatctg cattcaagcc gtgtatctcg
     4141 ctcacgcgca aaccgctgcc gtacatcagc tcgaacaggg cgtgatcgcg caccgccagc
     4201 gggtcgccgc cgtccacggg caaatccagc atccggttca gccattcctg cggcagggct
     4261 ttgggtacgc gctcgggctg cttcggcggt ttgatgtcgg cggtcgggtc ggtatgcagc
     4321 agaccgcgtt tgaccagcca ggcgcaatac tgccgccaag acgacagctt gcgcgccagc
     4381 gtccgcgcat tcaaaccgcg ctgcgacagc cgccgcaacg ccgccgtaaa atcgcgttgc
     4441 gacaagccct gcggcacgcc gcctgcatct tcagacggca tttgtgccaa cagcgcaaac
     4501 agttcttcca aatcgcgccg gtatgccgcc accgtgtgcc ccgacttgcc ctcgcgcacg
     4561 atgttttcca aataagcgtc aaaatgcgcc gcaaacccgt ccaaaaccat aaccgcccca
     4621 cacaaatatc aaaaaaacag tgaaaacatt atcataaacg acacaccaaa accccgaacc
     4681 gcccaaaatc cgacccgtcc gcccgccgtt atcgttaaca taaaatcaat gagccgttta
     4741 tggttttttg ccgcaaaaaa cattataatc cgccttattt acctattgcc caaggagaca
     4801 caaatggcac tcgtatccat gcgccaactg cttgatcatg ctgccgaaaa cagctacggc
     4861 ctgcccgcgt tcaacgtcaa caacctcgaa caaatgcgcg ccattatgga agccgccgac
     4921 caagtcaacg cgcccgtcat cgtacaggcg agtgcaggtg cgcgcaaata tgcgggcgcg
     4981 ccgtttttgc gccacctgat tctggcggct gtcgaagaat ttccgcacat ccccgtcgtg
     5041 atgcaccaag accacggcgc atcgcccgac gtgtgccaac gctccatcca actgggcttt
     5101 tcctccgtga tgatggacgg ctcgctgatg gaagacggca aaaccccttc ttcttatgaa
     5161 tacaacgtca acgccacccg taccgtggtt aatttctccc acgcttgcgg cgtatccgtc
     5221 gaaggcgaaa tcggcgtgtt gggcaacctc gaaactggcg aagccggcga agaagacggt
     5281 gtaggcgcag tgggcaaact ttcccacgac caaatgctca ccagcgtcga agatgccgtg
     5341 cgtttcgtta aagataccgg cgttgacgca ttggcgattg ccgtcggcac cagccacggc
     5401 gcgtacaaat tcacccgtcc gcccacaggc gacgtgttgc gtatcgaccg catcaaagaa
     5461 atccaccaag ccctgcccaa tacacacatc gtgatgcacg gttccagctc cgttccgcaa
     5521 gaatggctga aagtcatcaa cgaatacggc ggcaatatcg gcgaaaccta cggcgtgccg
     5581 gttgaagaaa tcgtcgaagg catcaaacac ggcgtgcgca aagtcaacat cgataccgac
     5641 ttgcgccttg cttccaccgg cgcggtacgc cgctaccttg ccgaaaaccc gtccgacttc
     5701 gatccgcgca aatatttgag caaaaccatt gaagcgatga agcaaatctg cctcgaccgc
     5761 tacctcgcgt tcggttgcga aggtcaggca ggcaaaatca aaccggtttc cttggaaaaa
     5821 atggcaaacc gttatgccaa gggcgaattg aaccaaatcg tcaaataaca ggttgcttgt
     5881 aaacaaaatg ccgtctgaac cgttgttcgg acggcatttg atttttgctt ctttgacctg
     5941 cctcattgat gcagtatgca aaaaaagata ccataaccaa aatgtttata tattgagacc
     6001 tttgcaataa cataggttac taaaatttta tgctcaatct cattttcaaa atgcaaaact
     6061 tttctgattt ttcctacttt ttgctcaata ttaggaaggt ttttaggcaa ttgaaaattt
     6121 tttggcgcat ttttatgcgt caaatttcgt taacagacta tttttgcaaa ggtctcatat
     6181 tatctattct gcgtatgact aggagcaaac ctgtgaaccg aactgccttc tgctgccttt
     6241 ctttgaccgc cgccctgatt ctgaccgcct gcagcagcgg aggcggcggt gtcgccgccg
     6301 acatcggcgc ggggcttgcc gatgcactaa ccgcaccgct cgaccataaa gacaaaagtt
     6361 tgcagtcttt gacgctggat cagtccgtca ggaaaaacga gaaactgaag ctggcggcac
     6421 aaggtgcgga aaaaacttat ggaaacggcg acagcctcaa tacgggcaaa ttgaagaacg
     6481 acaaggtcag ccgcttcgac tttatccgtc aaatcgaagt ggacgggcag ctcattacct
     6541 tggagagcgg agagttccaa gtgtacaaac aaagccattc cgccttaacc gcccttcaga
     6601 ccgagcaagt acaagattcg gagcattcag ggaagatggt tgcgaaacgc cagttcagaa
     6661 tcggcgatat agcgggtgaa catacatctt ttgacaaact tcccgaaggc ggcagggcga
     6721 catatcgcgg gacggcattc ggttcagacg atgccagtgg aaaactgacc tacaccatag
     6781 atttcgccgc caagcaggga cacggcaaaa tcgaacattt gaaatcgcca gaactcaatg
     6841 ttgacctggc cgcctccgat atcaagccgg ataaaaaacg ccatgccgtc atcagcggtt
     6901 ccgtccttta caaccaagcc gagaaaggca gttactctct aggcatcttt ggcgggcaag
     6961 cccaggaagt tgccggcagc gcagaagtgg aaaccgcaaa cggcatacgc catatcggtc
     7021 ttgccgccaa gcagtaacca ttgtgaaaat gccgtccgaa cacgataatt taccgttcgg
     7081 acggcatttt tgcgccatac cgccctagga tacgacggca cggcaggcaa gccggtttca
     7141 ctatataatg ccgtctgaac caacgagaac cacaccatgc aagccgattt caaccgcccc
     7201 gtcctcgccg tcgataccgg aacttcctat ttgtcgctcg cgctgcgcgc cgacggcgaa
     7261 acccgtctgt tccatcagga agtcggcagc cgccagtccg cactgatcct gccggaaatc
     7321 cgcaccctat tccgaaatgc aggcattacc gccgccgatt tgggggcgat tgtttatgcg
     7381 aaaggccccg gcgcgtttac gggactgcgt atcggtatcg gcgtggcgca aggtttggca
     7441 acgccgtttg atacgccttt aatcggcatc cccacgctcg atgccgccgc ctcgctgccg
     7501 ccgccgcaaa gctgcatact cgccgctgcg gacgcgcgta tgggcgaagt gttttatgcg
     7561 tggttcgaca cgctgaaccg ccgccgtttg agcgattatc aggtcgggcg ggcggcagac
     7621 atccggctgc cggagggatg tgccttttca gacggcatag gcagcgcgtt cgcgttggaa
     7681 gaaacgccgc cgttttcagg caaacccgat atgccgaccg ccgccgactt cctcaatctg
     7741 gcggctgaag gcggttttcc cgccgtcgct gcggcacacg ccgagctgct ctacgtccgc
     7801 aacaaaatcg ccctgactgc caaagaacag gcggaacgga gggcgcgcct gtgaacatcc
     7861 gccgcgccgt ttatgccgat tgcgcggcac tcgccgcact cgatgccgtc tgcaacccgt
     7921 ccgcgtggac gcaacgccaa tttgagtctg cattggtttc gctgtccgaa caggttttcc
     7981 tcgcggaaaa agacggcggg ttggccgcct ttatcgtttg gcagaacctg cccgacgaat
     8041 ccgaactgca cctgattgcc accgcgcccg aatgccgccg ccaaggaatt gcgtccgccc
     8101 tgctcgaata ttggttcgca catctgcccg aaggcacgca acgcctgctg ctcgaagtcc
     8161 gcgcaggcaa caccgccgcg caggcactgt acgcggcgca cggcttcagc attgcgggca
     8221 ggcggaaaaa ctattaccgc gccaccgacg ggcaaaccga agatgccgtc ttaatggaga
     8281 aaatatgtta agcgcgcgct acctccacct gcacgaagct ttgggtttgg gtccgatgtg
     8341 gctgaaacag gccgctgccg tcctgccgcc caaaaacaca cccgcaaccc cggcacaggc
     8401 acgtcctcaa accgtccgcg ccgccccgat ccgcccttcc caaccccata acggtcaggc
     8461 gcggctcgaa acgatgaaag cgttggaaac cgccgccgta cctacgcgca aacccgcgcc
     8521 tgaaaccgaa acgcctctgc ccggcctttc agacggcatc gcccccgttc ccgccgcttc
     8581 gggcatcacc aagcttgccg tcgtcagcct ttgcccaccg atcgaggatg cggtttacgg
     8641 gcaactgttc cacggcaaag cgggtgtcct gcttgacaac atactcaaag ccgtaggact
     8701 ggatgccgct tatgtacaca agaccagctg ggtgaaaacc gccgccgtcg gcaacccgat
     8761 gccgtctgaa caggccgtcg cgaatgcgct gggtcaaatc gccagggaac tcgacggctg
     8821 ccgtgccccc gccgtccttt tcctcgggca ggcttttgtc cagcctgaac ggcaaacgat
     8881 gattgaaact ttgtgcggca gccgtccctt cttcatcatc gaccatcccg ctcggctttt
     8941 acgccaaccc gaacttaaag cccgaaactg gcaggtgttg aaacagttga aacacgcctt
     9001 gcaggcaggc ggcagttgaa gcaggccgca cggggcggta gaatcgcaac tgcgtcccaa
     9061 tatctgacag aaagcacaaa atgaccgatt tccgccaaga tttcctcaaa ttctccctcg
     9121 cccaaaatgt tttgaaattc ggcgaattca ccaccaaagc cggacggcgg tcgccctatt
     9181 tcttcaatgc cggcctcttt aacgacggct tgtccacgct gcaactggca aaattctatg
     9241 cacaatccat cattgaaagc ggcatccgat tcgatatgct gttcggtccc gcctacaaag
     9301 gtattatttt ggcggcggca accgcgatga tgctggcgga aaaaggcgtg aacgtcccgt
     9361 ttgcctacaa ccgcaaagaa gccaaagacc acggcgaagg cggcgtgttg gtcggcgcgc
     9421 cgcttaaagg gcgcgtgctg attatcgacg acgtgatttc cgccggcaca tccgtacgcg
     9481 aatcgatcaa actgattgaa gcggagggtg caacccccgc cggtgtcgcc atcgcgctcg
     9541 accgcatgga aaaaggcacg ggtgaattga gcgcggttca ggaagtggaa aaacaatacg
     9601 gtctgcccgt cgcccccatc gccagcctga acgatttgtt tattctgttg caaaacaacc
     9661 ccgaattcgg acagttcctc gaacccgtcc gagcctaccg tcggcagtac ggcgtagaat
     9721 aaaaacaaag catatgccgt ccgaaccgcc ttacgcctca gacggcatca aacctgacac
     9781 acacgaggaa ataccatgcc cgcctgtttc tgcccccact gcaaaacccg tctctgggtc
     9841 aaagaaaccc aactcaatgt cgcccaaggc ttcgtcgtct gccaaaaatg cgaaggactg
     9901 tttaaagcca aagaccatct ggcaagcacg aaagaaccca tattcaacga tttgcccgag
     9961 gctgtttcgg atgtcaaact cgttcaccgc atcggcacgc gcgccattgg caagaaacag
    10021 atttcccgcg acgaaatcgc cggcatcctc aacggcggta caaccctgca cgatacgccg
    10081 cccgcaaccg ccgccacccc tgccgccgca ccgcaggttg ccgtaccgcc cgccgcgcct
    10141 gcccgtcagg aagggttcaa ctggacgatt gcaaccctgt ttgcccttat cgtcctcatt
    10201 atgcagcttt cctacctcgt catcctatga tcgtgcccga cctctttgtc gcccacttcc
    10261 gcgaagccgt cccctacatc cgccaaatgt gcggcaaaac gctggtcgcc ggcatagacg
    10321 accgcctgct cgaaggtgat accttaaaca agctcgccgc cgacatcggg ctgttgtcgc
    10381 aactgggcat caggctcgtc ctcatccacg gcgcgcgcca cttcctcgac cgccacgccg
    10441 ccgcgcaagg ccgcacgccg cattattgcc ggggcttgcg cgttaccgac gaaacctcgc
    10501 tcgaacaggc gcagcagttt gccggcaccg tccgcagccg ttttgaagcc gcattgtgcg
    10561 gcagcgtttc cgggttcgcg cgcgcgcctt ccgtcccgct cgtatcgggc aacttcctga
    10621 ccgcccgtcc gataggtgtg attgacggaa ccgatatgga atacgcgggc gttatccgca
    10681 aaaccgacac cgccgccctc cgtttccaac tcgacgcggg caatatcgtc tggctgccgc
    10741 cgctcggaca ttcctacagc ggcaagacct tctatctcga tatgcttcaa accgccgcct
    10801 ccgccgccgt ctcgcttcag gccgaaaaac tcgtttacct gaccctttca gacggcattt
    10861 cccgccccga cggcacgctc gccgaaaccc tctcggcaca ggaagcgcaa tcgctggcgg
    10921 aacacgccgg cggcgaaacg cgacggctga tttcgtccgc cgttgccgcg ctcgaaggcg
    10981 gcgtgcatcg cgtccaaatc ctcaacggag ccgccgacgg cagcctgctg caagaactct
    11041 tcacccgcaa cggcatcggc acgtccattg ccaaagaagc cttcgtctcc atccggcagg
    11101 cgcacagcgg cgacatcccg cacattgccg ccctcatccg cccgctggaa gaacagggca
    11161 tcctgctgca ccgcagccgc gaatacctcg aaaaccacat ttccgaattt tccatcctcg
    11221 aacacgacgg caacctgtac ggttgcgccg ccctgaaaac ctttgccgaa gccgattgcg
    11281 gcgaaatcgc ctgccttgcc gtctcgccgc aggcacagga cggcggctac ggcgaacgcc
    11341 tgcttgccca cattatcgat aaggcgcgca gtatgggcat aagcaggctg ttcgccctct
    11401 ccacaaatac cggcgaatgg tttgccgaac gcggctttca gacggcatcg gaagacgagt
    11461 tgcccgaaac gcggcgcaaa gcctaccgca gcaacggacg gaactcgcat attctggtac
    11521 gtcgcctgca ccgctgaccg caacggaaag ccgccgcaga aatgccgtct gaaccccgtt
    11581 tcagacggca tttccccgat tataaagacc tgcccaaccc tcaaggaccc cgatgaaatc
    11641 ctaccccgac ccctaccgcc attttgaaga cctcgattcc gccgaaacgc aaaacttcgc
    11701 tgctgaagcg aatgccgaaa cgcgcgcgcg ttttttaaac aacgacaagg cacgcgcatt
    11761 gtctgacggc attttggcgc agttgcagga cacgcggcaa attccgtttt gtcaggaaca
    11821 ccgcgcgcgg atgtaccatt tccatcagga cacggaatat ccgaagggcg tgtaccgcgt
    11881 gtgtacggcg gcgacttacc gttccggcta tcctgagtgg aaaatcctgt tttcggtggc
    11941 ggatttcgac gaattgctcg gcgacgatgt gtatttgggc ggcgtgtcgc acttggtgga
    12001 acagcccaac cgcgcgttgt taacactgag caaatcgggc ggcgatacgg cgtacacgct
    12061 ggaagtggat ttggaagcag gggaattggt agaaggcggt tttcactttc cggcaggtaa
    12121 aaaccatgtg tcgtggcgcg atgaaaacag cgtatgggtg tgtccggctt gggacgaacg
    12181 ccagttgacc gaatcgggct atccgcgcga ggtgtggctg gtggaacgcg gcaaaagttt
    12241 cgaggaaagc ctgcctgtgt atcaaatcga taaagatgca atgatggtga acgcgtggcg
    12301 ttatctcgat ccgcagggtt cgccgattga tttgattgaa gcgtcggacg gtttttacac
    12361 caaaacctat ttgcaggtgt cgtcggaaag cgaggcgaaa ccgttaaacc tgcccaacga
    12421 ttgcgacgtg gccggctatc tggccggaca tcttttgctg acgttacgta aagactggaa
    12481 ccgcgcgaac caaagctatc cgagcggcgc attggtggcg gtgaagctga atcggggcga
    12541 actcggggcg gcacagcttt tgtttgcgcc cgatgaaacg caggcattgg aaagcgtgga
    12601 aacgaccaag cgttttgtgg tggcgagcct gctggaaaac gtacaaggcc gtctgaaagc
    12661 gtggcggttt gccgatggca aatggcagga agctgagttg ccgcgcctgc cttcgggcgc
    12721 gttggaaatg accgatcagc cttggggcgg cgacgtggtt taccttgccg ccagcgattt
    12781 caccacgccg ctgacgctgt ttgcgctgga tttgaacgtg atggaactga ccgtcatgcg
    12841 ccgccagccg cagcagtttg attcagacgg cattaacgtg cagcagtttt ggacgacttc
    12901 ggctgacggc gagcgcattc cttatttcca cgtcggcaaa aacgccgcgc ccgacatgcc
    12961 gacgctggtc tatgcctacg gcggtttcgg cattcccgaa ttgccgcatt atctgggcag
    13021 cattggcaaa tattggctgg aagagggcaa tgcctttgta ttggcgaaca tccgcggcgg
    13081 cggcgagttc ggcccgcgct ggcatcaggc ggcgcagggc atcagcaaac ataaaagcgt
    13141 tgatgattta ttggcagtcg tgcgcgattt gtccgaacgc ggcatgagtt cgcccagaca
    13201 catcggtttg cagggcggca gcaacggcgg cctgattacc gccgctgcct tcgtgtgcga
    13261 accgcaaagc atcggcgcgc tggtgtgcga agtaccgctg accgacatga tccgttatcc
    13321 gctattgtcc gccggttcaa gttggacgga cgaatacggc aatccgcaaa aatacgaagt
    13381 ctgcaaacgc tggctgggcg aattgtcgcc gtatcacaat ctttcagacg gcatcgatta
    13441 tccgcctgcg ctcattacca ccagcctcag cgacgaccgc gtccatcctg cccacgcgct
    13501 caagttttac gccaaactgc atgaaacctc ggcgcaatct tggctctact cgcctgacgg
    13561 cggcggccat accggcaacg gcacccaacg cgaatccgcc gacgaactcg cctgcgtctt
    13621 gctgtttttg aaagagtttt tgggctaagg gcggggagcg gcactgccgc cgcgaatgaa
    13681 aaaaggtcgt ctgaaactgc tttttcagac gacctttttt aatggttgtt tcaaatcaaa
    13741 atatctatgc cgccggcccc atcagcactt cttcacatcc gaaggcaaaa atccgtaatg
    13801 ccgtctgaac gcttcgttga accgtcccgc gtggcggtag ccgcaaaagt gcatggcggc
    13861 ttggacggtg ctgccggatt cgatgagggc gagcgcgtgt tccagccgca ggcggcgcag
    13921 gcatccggcg acggtttcac cggtttgcgc tttgaaatag cgtttcaggt agcattcgtt
    13981 cagtccgacg cggcgggcga tttcggcgat ggtcagcgga cgggcgaatt cgtgttgcag
    14041 gatgtcggcg gcttcgtcta tgcgccggcg gcggtaaccg ttgtcgtggc ggcggaaggt
    14101 gaagcgcaat aatcgggcgg agagttccag cgcggcggct tcgtcggcaa gcaggccgaa
    14161 gccgtccgat tcgaacgggc gttgcagcag tgggcaggcc gccgccgtca gtgccgctgc
    14221 gttttgcgcc agccgttgca gggcgaatcg gcctattgtt tgcggcgaaa acaggcgttc
    14281 gtccagcaag ccttcgtcgt gccagcggcg cagtttttcc agcgaaaaat ccaaatgcag
    14341 cgcgcacatg ccgctgttgt cgggcagcag ggtttcggat acgtccgcca actcgccgcg
    14401 taccagccag atttcgccgg cagacgggcg gtattccctg ccgcccattt gtaaccggtt
    14461 ctgccccgac accatgacga acaaggcgca gttgtggctg aaattgtgga tttcggtggg
    14521 aaacgcgccc gttccgccgc cgcgcatccg cgacaaggtg atgcccgagt cgaagcggtt
    14581 gatgcacatt tccagatgca aaccgggctg ttttgcctgc gcaatgagcg cgctgtcgga
    14641 acagccgtcc aacgcccagc cggatttatc ggagcggaca taggtttggt actggcggta
    14701 gatggcggcg gtgttcatga ttggatagga acgagttgtc taacaaatga attaaatagg
    14761 aattattacc aataatcaag cgcagggatt ggttgaaacg gaaaaggtcg tctgaaaggg
    14821 tgtttcagac gaccttttcc gtatcgggaa tttgttttgc cgtatcggga attttgcgtt
    14881 ttgcggcgtg gtttctgcag gttgtttgct taataataaa cattcttatt cgtatgcaaa
    14941 ggaaccgcac accgtgaaac cgcgttttta ttgggcagcc tgcgccgtcc tgctgaccgc
    15001 ctgttcgccc gaacctgccg ccgaaaaaac tgtatccgcc gcatccgcat ctgccgccac
    15061 actgaccgtg ccgaccgcgc ggggcgatgc cgttgtgccg aagaatcccg aacgcgtcgc
    15121 cgtgtacgac tgggcggcgt tggatacgct gaccgaattg ggcgtgaatg tgggcgcaac
    15181 caccgcgccg gtgcgcgtgg attatttgca gcctgcattt gacaaggcgg caacggtggg
    15241 gacgctgttc gagcccgatt acgaagccct gcaccgctac aatcctcagc ttgtcattac
    15301 cggcgggccg ggcgcggaag cgtatgaaca gttggcgaaa aacgcgacca ccatagatct
    15361 gacggtggac aacggcaata tccgcaccag cggcgaaaag cagatggaga ccttggcgcg
    15421 gattttcggc aaggaagcgc gcgcggcgga attgaaggcg cagattgacg cgctgttcgc
    15481 ccaaacgcgc gaagccgcca aaggcaaagg acgcgggctg gtgctgtcgg ttacgggcaa
    15541 caaggtgtcc gccttcggca cgcagtcgcg gttggcaagt tggatacacg gcgacatcgg
    15601 cctaccgcct gtagacgaat ctttacgcaa cgaggggcac gggcagcctg tttccttcga
    15661 atacatcaaa gagaaaaacc ccgattggat tttcatcatc gaccgtaccg ccgccatcgg
    15721 gcaggaaggg ccggcggctg tcgaagtatt ggataacgcg ctggtacgcg gcacgaacgc
    15781 ttggaagcgc aagcaaatca tcgtcatgcc tgccgcgaac tacattgtcg cgggcggctc
    15841 gcggcagttg attcaggcgg cggagcagtt gaaggcggcg tttgaaaagg cagaacccgt
    15901 tgcggcgggg aaagagtagg gagtcgtctg aaaacggagc ttccgaagga agcggggggt
    15961 ttctgcgaag ctaaagtgcg gtttcaacga attgaaaagc agcctgtatt ttgaaaatac
    16021 cgctcaagca aacctacggt ttgccgccct ctccctagcc ctctcccaca gggagagggg
    16081 attgggttgc aggctgcctt taaggtttag gcaaattttt aacttcgttg aagctccgtt
    16141 ttcagacgac cttttggaac accacaggca cacgcatcga acggctgaat caaagattca
    16201 gaccgatggc agtccgcacc cgagtttatg cggcaaacag cgaggctacg gcaacccgcc
    16261 ccctctccct gtgggagagg gttagggaga gggcggtaag ccgcaggctt acatcaaagt
    16321 cgataacgct ttcgttacaa ctccgcccac tgaacgaagc caaaacgaca aaccgcatcg
    16381 taaaccaccc aacccatagg agaaccccat gcaaaacgaa accatcaacc tgaaacagca
    16441 ccttgccgcc atcaaagaat actggcagcc cgaaatcatc aaccgccacg ggttccaatt
    16501 ccgtttggtc aaacttttgg gcgattacgg ctggcatacg cacggataca gcgacaaagt
    16561 gctgtttgcc gtggagggcg acatggcggt ggacttcgcc gacggcggca gcatgacgat
    16621 acgcgagggc gagatggcgg tcgtgccgaa gtcggtgtcg caccgcccgc gttcggaaaa
    16681 cggctgctcg gtggtgctga ttgagttgtc cgacccgtcc gaggccgtct gaaaacgaag
    16741 tttccgaagg aagctgagtt tctgcgaagc taaaagcagc ctgcaccttc aatcaatatg
    16801 ccgaaaatac aaccccaccg cacaccaaca cacaaaggaa atcccatgac acgcttcaaa
    16861 tattccctgc tgtttgccgc cctgttgccc gtgtacgcgc aggccgatgt ttctgtttca
    16921 gacgacccca aaccgcagga aagcactgaa ttgccgacca tcaccgttac cgccgaccgc
    16981 accgcgagtt ccaacgacgg ctacactgtt tccggcacgc acaccccgct cgggctgccc
    17041 atgaccctgc gcgaaatccc gcagagcgtc agcgtcatca catcgcaaca aatgcgcgac
    17101 caaaacatca aagcgctcga ccgcgccctg ttgcaggcga ccggcaccag ccgccagatt
    17161 tacggctccg accgcgcggg ctacaactac ctgttcgcgc gcggcagccg catcgccaac
    17221 taccaaatca acggcatccc cgttgccgac gcgctggccg atacgggcaa tgccaacacc
    17281 gccgcctatg agcgcgtaga agtcgtgcgc ggcgtggcgg ggctgctgga cggcacgggc
    17341 gagccttccg ccaccgtcaa tctggtgcgc aaacgcccga cccgcaagcc attgtttgaa
    17401 gtccgcgccg aagcgggcaa ccgcaaacat ttcgggctgg gcgcggacgt atcgggcagc
    17461 ctgaatgccg aaggcacgct gcgcggccgc ctggtttcca ccttcggacg cggcgactcg
    17521 tggcggcagc gcgaacgcag ccgcgatgcc gaactctacg gcattttgga atacgacatc
    17581 gcaccgcaaa cccgcgtcca cgcaggcatg gactaccagc aggcgaaaga aaccgccgac
    17641 gcgccgctca gctacgccgt gtacgacagc caaggttatg ccaccgcctt cggcccgaaa
    17701 gacaaccccg ccacaaattg ggcgaacagc cgccaccgtg cgctcaacct gttcgccggc
    17761 atcgaacacc gcttcaacca agactggaaa ctcaaagccg aatacgacta cacccgcagc
    17821 cgcttccgcc agccctacgg cgtagcaggc gtgctttcca tcgaccacaa caccgccgcc
    17881 accgacctga ttcccggtta ttggcacgcc gacccgcgca cccacagcgc cagcgtgtca
    17941 ttgatcggca aataccgcct gttcggccgc gaacacgatt taatcgcggg tatcaacggt
    18001 tacaaatacg ccagcaacaa atacggcgaa cgcagcatca tccccaacgc cattcccaac
    18061 gcctacgaat tttcccgcac gggcgcctat ccgcagccat catcgtttgc ccaaaccatc
    18121 ccgcaatacg gcaccaggcg gcaaatcggc ggctatctcg ccacccgttt ccgcgccgcc
    18181 gacaaccttt cgttgatact cggcggcaga tacagccgtt accgcaccgg cagctacgac
    18241 agccgcacac aaggcatgac ctatgtgtcc gccaaccgtt tcacccccta cacaggcatc
    18301 gtgttcgacc tgaccggcaa cctgtcgctt tacggctcgt acagcagcct gttcgtcccg
    18361 caatcgcaaa aagacgaaca cggcagctac ctgaaacccg taaccggcaa caatctggaa
    18421 gccggcatca aaggcgaatg gcttgaaggc cgtctgaacg catccgccgc cgtgtaccgc
    18481 gcccgtaaaa acaacctcgc caccgcagca ggacgcgacc cgagcggcaa cacctactac
    18541 cgcgccgcca accaagccaa aacccacggc tgggaaatcg aagtcggcgg ccgcatcacg
    18601 cccgaatggc agatacaggc aggttacagc caaagcaaaa cccgcgacca agacggcagc
    18661 cgcctgaacc ccgacagcgt acccgaacgc agcttcaaac tcttcactgc ctaccacttt
    18721 gcccccgaag cccccagcgg ctggaccatc ggcgcaggcg tgcgctggca gagcgaaacc
    18781 cacaccgacc ctgccacgct ccgcatcccc aaccccgccg ccaaagcccg cgccgccgac
    18841 aacagccgcc aaaaagccta cgccgtcgcc gacatcatgg cgcgttaccg cttcaatccg
    18901 cgcgccgaac tgtcgctgaa cgtggacaac ctgttcaaca aacactaccg cacccagcct
    18961 gaccgccaca gttacggcgc actgcggaca gtgaacgcgg cgtttaccta tcggtttaaa
    19021 taaggtcgtc tgaaaacgga gtttctgcga ag
//
LOCUS       DBBZXU010000030        18915 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.030, whole genome shotgun sequence.
ACCESSION   DBBZXU010000030 DBBZXU010000000
VERSION     DBBZXU010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18915)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18915)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18915
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.030"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            390..1106
                     /locus_tag="ACJJDE_000907"
     CDS             390..1106
                     /locus_tag="ACJJDE_000907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003685045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S24 family peptidase"
                     /protein_id="HGG7540853.1"
                     /translation="MTMHETTDRLFEIAKEQGVLKPADIAERLNISQQALKNWESRGI
                     AAKALPEVAKAFGVSETWLRTGEGSRTAPVLIDPDLPHEVKDIHRPMTWSSNDPLPDD
                     DYVFVPYLKESCFKGGVGTYEIPDYNGYRLPFGKSTLKRKGINPDNVFCCTLTGDSME
                     EKIAEDAAIAVDTGETAIRDGKIYAFAQDGMFRVKYLIRQPGNSVLIRSHNSGFYGDE
                     NAPLDSLTVIGRVFWWSVLD"
     gene            1209..1634
                     /locus_tag="ACJJDE_000908"
     CDS             1209..1634
                     /locus_tag="ACJJDE_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540854.1"
                     /translation="MNFLGVQGELKVHELHHRTATLCFEWLGEVSAPRRKENYKDLKP
                     NVLYDFDGSGKHFANPDARYLLPVGSSGLILKHIQIDDEDTLLRLWCARNIPMPHRLS
                     KIPMLRQYYLSKAWHEIYAINQHLRKTKLIVDVAYDPTD"
     gene            1878..2078
                     /locus_tag="ACJJDE_000909"
     CDS             1878..2078
                     /locus_tag="ACJJDE_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540855.1"
                     /translation="METITIPKENFDALLNLARTAVALNENFIPKINYGASTIPAAGF
                     AALNEFGIARSTVESLEILKIK"
     gene            2146..2505
                     /locus_tag="ACJJDE_000910"
     CDS             2146..2505
                     /locus_tag="ACJJDE_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540856.1"
                     /translation="METQEKKFVPASKQIPTVNSGWLDRELGEAMSEAVRACLAHGKQ
                     SEITVKLKIQPQNIQSGTVKISHDVATKLPKEKREGGIVFATPDGNIQADDPAQGKLK
                     LKQVSNTSSTLKMVRSN"
     gene            2530..3384
                     /locus_tag="ACJJDE_000911"
     CDS             2530..3384
                     /locus_tag="ACJJDE_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdQ family protein"
                     /protein_id="HGG7540857.1"
                     /translation="METQENMIKTALQAAQKPFFEFAPNNTPLVFTPDQDGGWRYKSH
                     PELMQNPYRKCGKFLMHDTASLIKFVQKHKQDGTQIYIDADFKSGRIDVTAVINGHTQ
                     QAPGWLDFYAVYTPQHTTSASNWLNNNAHRMNQMEFSHFLTNNARNIVSKNPGNENSV
                     YPTAAEVLDFALNLEYTEKTTFKQGYREQDGRINFTFQSEDSGQTEKNLKMFERFGIE
                     FTPHQGGASYFVEALLKFRIDKNSGALVLWYELQQIDAVIEQAAKDISEAVQKAFPEI
                     DIYFGVIA"
     gene            3454..3669
                     /locus_tag="ACJJDE_000912"
     CDS             3454..3669
                     /locus_tag="ACJJDE_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540858.1"
                     /translation="MTITEEYSIDIRVTSEQGKNDYGYPTERYGCDIINTDGELLVGI
                     EPEYKTPFAAVRKALICLTKDNLKNAA"
     gene            3704..3964
                     /locus_tag="ACJJDE_000913"
     CDS             3704..3964
                     /locus_tag="ACJJDE_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NGO1622 family putative holin"
                     /protein_id="HGG7540859.1"
                     /translation="MKYLIRTALLAVAAAGIYACQPQSEAAVQVKAENSLTAMRLAVA
                     DKQAEIDGLNAQIDAEIRQREAEELKDYRWIHGDAEVPELEK"
     gene            3961..4254
                     /locus_tag="ACJJDE_000914"
     CDS             3961..4254
                     /locus_tag="ACJJDE_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540860.1"
                     /translation="MNFQEENENIKNDIEINLLHSAEADSVEAMMDLAVYGLAAMVAK
                     HNKTRGEQLVLQAIAGHMRKLLAALPETESLVQTGKVYRRLEDLIFKTYLPEQ"
     gene            4257..4448
                     /locus_tag="ACJJDE_000915"
     CDS             4257..4448
                     /locus_tag="ACJJDE_000915"
                     /inference="COORDINATES: protein motif:HMM:NF037202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type ISP restriction/modification enzyme"
                     /protein_id="HGG7540861.1"
                     /translation="MNTNQDTIPFGGNLVICCSTGNGGDGRFSCLITDQIPDLNLVRS
                     GQAFPMFIYEYETREKRKA"
     gene            4448..4588
                     /locus_tag="ACJJDE_000916"
     CDS             4448..4588
                     /locus_tag="ACJJDE_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HGG7540862.1"
                     /translation="MDTLLKIIIALSFSGAEALVVWLFITAADAVLRRFQKPSHYRRV
                     KK"
     gene            4585..4794
                     /locus_tag="ACJJDE_000917"
     CDS             4585..4794
                     /locus_tag="ACJJDE_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate dehydrogenase"
                     /protein_id="HGG7540863.1"
                     /translation="MNINELGARIDRPTIRELIAYATCRNRPISNSTLLRMEKDGRIP
                     CRLKTPLTSPVWDTREVLEALGLQQ"
     gene            complement(4852..5769)
                     /locus_tag="ACJJDE_000918"
     CDS             complement(4852..5769)
                     /locus_tag="ACJJDE_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005634 - nucleus [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KilA-N domain-containing protein"
                     /protein_id="HGG7540864.1"
                     /translation="MNVSVLNFGNTPVSFRQDGFLNATAIASHFGKLPKDYLKSEQTQ
                     QYISALAENLSVRRKILTEANQIVIVKRGGSEQGTWLHPKLAIHFARWLNPKFAVWCD
                     EQIEILLNGKISDGIKTVTPKPTRALPDGLTGEQIEAVKKLHNALTKSAPKEAQARIA
                     ITLWSAVKSKFGCSYKEVPAEQFPEVLSVMGRVAVENGVLYGEVLDREPLPAPQPALP
                     ISGNALYDLAVAVRYGAWAIQMGRDVSLPLKQLGCKQAVTMWTVWAETRSRLKAAANA
                     LEALNAHADAEHAAKIRPMLPEIRNLSSV"
     gene            complement(6638..6994)
                     /locus_tag="ACJJDE_000919"
     CDS             complement(6638..6994)
                     /locus_tag="ACJJDE_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HGG7540865.1"
                     /translation="MAERNNAALQEAITIVNGLAKTDGCILATYTSDTPDKKKDREAI
                     LTVLNQREFVCAGVLGGALHEKMYKDFEYSMLLRDWDNLSSFIFEIRRIRSAPTAFQE
                     FEAVARKWKKKPLKTK"
     gene            complement(7542..7922)
                     /locus_tag="ACJJDE_000920"
     CDS             complement(7542..7922)
                     /locus_tag="ACJJDE_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7540866.1"
                     /translation="MPLKFQPRERSVIMCDFRGYEEPEMVKKRPVVVIARNRHNGKLV
                     TVVPLSSTEPVPLADYHHKMSGNPLPDKPHIQCWAKCDMTATVGLARLDRYKPKGRDR
                     CIPIISEEDFQAIKTAVAKAFKLY"
     gene            complement(8079..9275)
                     /locus_tag="ACJJDE_000921"
     CDS             complement(8079..9275)
                     /locus_tag="ACJJDE_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HGG7540867.1"
                     /translation="MAKIITPLSANQVKNAKPRDKLYKLSDGGGLALWVYPTGGRSWK
                     LSFVQDGRQQTISLGRYPDFSLADAREWREEVRRKRAHGENVVNKKVRADFAFEKVTR
                     DWFVRWSKGRSEKYAGQVMRNFERWVFPAIGNLDIRQVRTADVVGCLRVMEARGIVDT
                     LRKTKNSLKMVFAFAVGSGMMEINPVAQIGSGVFERAKTGNMAALSPSELPRLIDFLE
                     QRNEFAVYAGRVRIHPVTRLCIYWLLLTMTRIQEAALMEWSELDGEVWRIPAERKKER
                     RGHDVPLSRAMQWVLDQARALNVNGRFVFESVNFQGHINKESPRVAMQRAGLDTTAHG
                     LRSLARTYLREVLKVDNDVAEKLLAHSLGTRTQTAYNRSELWEERKDALERWGNDVLR
                     LAKNGK"
     gene            complement(9466..9555)
                     /locus_tag="ACJJDE_000922"
     tRNA            complement(9466..9555)
                     /locus_tag="ACJJDE_000922"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9519..9521),aa:Ser,seq:cga)
     gene            complement(9659..9749)
                     /locus_tag="ACJJDE_000923"
     tRNA            complement(9659..9749)
                     /locus_tag="ACJJDE_000923"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9713..9715),aa:Ser,seq:tga)
     gene            complement(9832..10611)
                     /gene="yaaA"
                     /locus_tag="ACJJDE_000924"
     CDS             complement(9832..10611)
                     /gene="yaaA"
                     /locus_tag="ACJJDE_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HGG7540868.1"
                     /translation="MFFVLSPAKNLNEKDPAPVSEFTQPDLLAESDILMQQLRELAPQ
                     QIAELMHVSDKIALLNAQRNAEWHTPFTPENAKQAVFMFNGDVYEGMDANTLDIGQIR
                     YLQNHVRLLSGLYGLLRPLDLIQPYRLEMGTAFANLRGKNLYEFWGDIITNLLNDTLA
                     QAGSNTLVNLASQEYFKSVNTKKLRARLITPIFKDEKNGKYKIISFYAKRARGLMVRY
                     AVEHHITDPEMLKNFNYEGYAFNDAASNESEWVFMRSEQIK"
     gene            complement(10775..11962)
                     /gene="dapC"
                     /locus_tag="ACJJDE_000925"
     CDS             complement(10775..11962)
                     /gene="dapC"
                     /locus_tag="ACJJDE_000925"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009016 - succinyldiaminopimelate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyldiaminopimelate transaminase"
                     /protein_id="HGG7540869.1"
                     /translation="MNTLLNQLKPYPFARLREAMQGISAPEGLEAVPLHIGEPKHPTP
                     KVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREA
                     LFSFVQTVLDPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANCPAPSFNPDWRSI
                     SEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNK
                     PLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYHGSA
                     MSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVFDVKLPDASFYIWLKVPD
                     GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALVADVATCVKAAETIVS
                     LYR"
     gene            complement(12039..12491)
                     /gene="dut"
                     /locus_tag="ACJJDE_000926"
     CDS             complement(12039..12491)
                     /gene="dut"
                     /locus_tag="ACJJDE_000926"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HGG7540870.1"
                     /translation="MNIEVEMKVLDERMADFIPTYATAGSAGLDLRACLDEEVVLQPG
                     ETFLVPTGLAIYLANPSYAAVLLPRSGLGHKHGIVLGNLVGLIDSDYQGELKVSLWNR
                     SSEPFAVKPFERIAQMVIVPIVQARFKRVEEFVGSSRGEGGFGSTGLH"
     gene            complement(13054..13527)
                     /locus_tag="ACJJDE_000927"
     CDS             complement(13054..13527)
                     /locus_tag="ACJJDE_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX family type IV pilin"
                     /protein_id="HGG7540871.1"
                     /translation="MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIERGYQSQLYTE
                     MVGINNISKQFILKSPLDDNQTIKSKLEIFVSGYKMNPKIAEKYNVSVHFVNKEKPRA
                     YSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASARAHLETLSSDVGCEAFSNRKK"
     gene            complement(13532..14125)
                     /locus_tag="ACJJDE_000928"
     CDS             complement(13532..14125)
                     /locus_tag="ACJJDE_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilX N-terminal domain-containing pilus assembly
                     protein"
                     /protein_id="HGG7540872.1"
                     /translation="MRKQNTLTGIPTSDGQRGFALFIVLMVMIVVAFLVVTAAQSYNT
                     EQRISANESDRKLALSLAEAALREGELQVLDLEYDTDSKVTFSENCGKGLCTAVNVRT
                     NNDNEEAFDNIVVQGKPTVEAVKRFCPANSTDLCIDKKGMEYKKGKGSVSKPPRYIIE
                     YLGVKNGENVYRVTAKAWGKNANTVVVLQSYVSNNDE"
     gene            complement(14104..15072)
                     /locus_tag="ACJJDE_000929"
     CDS             complement(14104..15072)
                     /locus_tag="ACJJDE_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilW family protein"
                     /protein_id="HGG7540873.1"
                     /translation="MRRKMLNVPKGSYDGMKGFTIIEFLVAGMLSMIVLMAVGSSYFT
                     SRKLNDAANERLAIQQDLRNAATLIVRDARMAGSFGCFNMSEHTEKDVVSDVPQKNRL
                     FSLKGSSANKLIPNGTDNKLIPITESLDINYQNFFQVGSALIFQYGIDDVNASAATTV
                     VSSCAAISKPGKQILTLENVKKELKISDQDKEQNGNIARQRHVVNAYAVGRIAGEEGL
                     FRFQLDDKGKWGNPQLLAKKIRYMKVRYIYVSDCPEDDDAGKEETFRYTDKFNSAQDA
                     VTPAGVEVLLSSGTDTKIAASSDNHIYAYRIDATIRGGNVCANRTL"
     gene            complement(15069..15683)
                     /gene="pilV"
                     /locus_tag="ACJJDE_000930"
     CDS             complement(15069..15683)
                     /gene="pilV"
                     /locus_tag="ACJJDE_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus modification protein PilV"
                     /protein_id="HGG7540874.1"
                     /translation="MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVA
                     SVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKNYNLYMGNHHTLSAVDGDFAVDA
                     VKSKKDLAKAQLDRFGYELKNALQDAAAIYYAVCKDSSGAAPTLSAGSTFSSNCDNKA
                     NGDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE"
     gene            complement(15713..16381)
                     /locus_tag="ACJJDE_000931"
     CDS             complement(15713..16381)
                     /locus_tag="ACJJDE_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015627 - type II protein secretion
                     system complex [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GspH/FimT family pseudopilin"
                     /protein_id="HGG7540875.1"
                     /translation="MCTRKQQGFTLTELLIVMVIAAIMAMIALPNMSQWIASRRIASH
                     AERIANLLRFSRGEAVRLNLPVYICPVQVKKDGTVNNKCDSGKKGQGMLAFGDKNGNK
                     GYDNDTADVLLRSVVLNDDINDKRINYAFNHIAFGQTQPTTDRVVWTFNQNGTFGYTK
                     DQHLTKQSSFFYSDGYIQIVLTDARAVSDADKKFRSAVVLIDSSGRVEVCPRNDRRTV
                     CQYK"
     gene            complement(16690..18096)
                     /gene="dnaB"
                     /locus_tag="ACJJDE_000932"
     CDS             complement(16690..18096)
                     /gene="dnaB"
                     /locus_tag="ACJJDE_000932"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HGG7540876.1"
                     /translation="MNDYAAMPSEDREVGALSLPPHSMEAEQSVLGGLMLENPAWDRI
                     ADVVSGEDFYRHEHRLIFRSIAKLINESRPADVITVQEDLQRNEELEAAGGFEYLITL
                     AQNTPSAANIRRYAEIVRERSIMRQLAEVGTEIARSAYNPQGRDAGQLLDEAENKVFQ
                     IAESTAKSKQGFLEMPDLLKEVVQRIDMLYSRDNPDEVTGVPTGFIDLDKKTSGLQPG
                     DLIIVAGRPSMGKTAFSINIAEHVAVEGKLPVAVFSMEMGGAQLVMRMLGSVGRLDQS
                     VLKTGRLEDEHWGRLNEAVVKLSDAPVYIDETPGLTALELRARARRLARQFNNKLGLI
                     VIDYLQLMAGSGRSDNRASELGEISRSLKALAKELQVPIIALSQLSRTVESRTDKRPM
                     MSDLRESGAIEQDADLIMFMYRDEYYNQDSPMKGLAECIIGKHRNGPVGKIFLTWTGQ
                     FTKFDNAAYIPEEAKIED"
     gene            18260..18847
                     /locus_tag="ACJJDE_000933"
     CDS             18260..18847
                     /locus_tag="ACJJDE_000933"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HGG7540877.1"
                     /translation="MEHKLPQLPYEPDALSPHLSKETLEFHYGKHHQTYITNLNNQIK
                     GTEFENLPLEEIVKKSSGGVFNNAAQTWNHTFYWLGFTPKGQGKPSGELAAAIDAKWG
                     SFEKFQEAFNACAAGTFGSGWAWLVKTPAGGLDLVSTSNAATPLTTENTPLLTCDVWE
                     HAYYIDYRNSRPNYLKGFWEIVNWDEVAKRFAALS"
BASE COUNT         5016 a         4886 c         4298 g         4715 t
ORIGIN      
        1 aatattaaaa attatcgtca tcaatgcggc ttccccagcc cgcggcgagc tttccacgac
       61 aggctttttt tatttgggtt ggtcgtctgg tttctttgag ttcaaaaaca ggtcgggata
      121 cttaagtttt attcgtgcag gtatcccgcg cttcgtccaa ttgaaaacgc attgagggct
      181 attccctgtt attcgaccaa cttccgcgta actgccgatt gattgcaaca ggcgtttgtc
      241 ttcattgact cttttatcca taaataaacc aaatgtttaa atctaatgct aatattaaac
      301 actatgttta gataaaaatc aagtcttgtg taacaacatt ttgtttaaat atgggagaat
      361 aattaagcca accgcgaata agattaaaaa tgacaatgca cgagacaact gacagacttt
      421 ttgagatagc caaagagcag ggagttttaa agccggctga catagcagag cgtctgaata
      481 tcagccaaca ggctttgaaa aactgggaaa gtcgtggcat agcggcaaag gcgctgcctg
      541 aagtagcaaa agcattcggt gtatctgaaa catggctgag aacaggtgaa ggcagccgaa
      601 ccgcgcccgt ccttattgac cccgacctac cccacgaagt caaagacatc caccgcccga
      661 tgacgtggag cagcaacgac ccgctgcccg acgatgatta tgttttcgtc ccctacctca
      721 aagagagctg cttcaaaggc ggagtaggca cgtatgaaat ccccgattac aacggctacc
      781 gcctgccgtt cggcaaatcc acgcttaaac gcaaaggcat caatcccgac aacgtgtttt
      841 gctgcaccct gaccggcgac agtatggagg aaaaaatcgc agaagacgcg gcaattgccg
      901 tagatacggg cgaaaccgcc atacgcgacg gcaaaatcta cgccttcgcc caggacggta
      961 tgttccgcgt gaagtacctg atacggcagc ctggcaacag cgttctgata cgcagccaca
     1021 acagcggttt ctatggcgac gaaaacgccc ccttggacag cctgaccgtt atcggcaggg
     1081 tattttggtg gagcgtgctg gattgaaaaa tgttgctatt acgacgagat aatattgata
     1141 gggctttcaa gattgtcaaa aataggcgtt ttgattcccc ttggtggcct ggtgagtacg
     1201 atgccggtat gaatttcctt ggcgtacaag gagagttgaa ggttcacgag ctgcatcaca
     1261 gaacagcaac cctgtgcttt gagtggcttg gcgaagtatc tgcgccgcgc agaaaagaga
     1321 actacaaaga cctcaagcca aatgtattgt atgactttga tggttccggt aagcattttg
     1381 ccaaccctga cgcaaggtat ctattgcccg tcggttcaag cggcttaatc ttaaaacata
     1441 tccaaatcga tgacgaagac actctgttgc ggctatggtg cgcacgaaat atcccaatgc
     1501 cacaccggct atctaaaatc ccgatgcttc ggcagtatta tctaagcaag gcatggcacg
     1561 aaatttatgc tatcaaccaa cacctaagga aaacgaagct gatagttgat gtggcatacg
     1621 accccacaga ttaaacaacc cgcccgcatt atgcgggctt ttttcatgcc ccgccgaacc
     1681 tgaaaacaac acaaaaccga caaagccgcc ttaataggcg gtttttttgc gcctgcgaaa
     1741 tctcaaaaat aaattctttt aataatcaaa atgtttataa accttaaaca aaaatcttaa
     1801 acagattgtt gcatattatt aaacgctatg tttaaataca cccatcgaaa caaacaacag
     1861 ccacatggag taccgacatg gaaaccatca ccatccctaa agaaaatttc gacgctttgc
     1921 taaatctcgc aagaaccgcc gtcgccctga acgaaaattt tattccaaaa ataaattacg
     1981 gagcatccac cataccagca gccggctttg ccgcacttaa cgagtttgga atagcccgct
     2041 ccaccgtgga atctttggaa attctcaaaa ttaaataacc tcctcggtat tgtcatcccg
     2101 tgataccggc aacctaacta acctctcttt aaaggaaaat caaaaatgga aacccaagaa
     2161 aagaaatttg ttcctgcctc caagcaaata ccgaccgtaa atagcggctg gttagaccgt
     2221 gaattaggcg aagccatgag tgaagcggtg cgtgcctgcc ttgctcacgg taaacagtca
     2281 gaaattactg tcaagctcaa aatccaaccc caaaacatcc aaagcggaac ggtaaaaatc
     2341 agccacgatg tagcaaccaa actgcccaaa gaaaaacgcg aaggcggcat cgtctttgct
     2401 acacctgacg gcaacatcca agccgacgat ccggcacaag gaaaattgaa actcaaacaa
     2461 gtttccaata cgtcaagcac gttgaaaatg gtcagatcca actaactcaa acacaaaagg
     2521 aaatctaaaa tggaaaccca agaaaacatg attaaaaccg ccttacaagc agctcaaaaa
     2581 cctttttttg agtttgcacc gaacaatact ccgcttgtat tcacaccaga ccaagacggt
     2641 ggctggagat acaaatcaca ccccgaattg atgcaaaacc cgtaccgcaa gtgcggcaaa
     2701 ttcctcatgc acgataccgc cagtcttatt aagtttgtac aaaaacacaa acaggacggc
     2761 acacaaatct acattgatgc cgatttcaaa tcagggcgta ttgatgtcac cgccgtcatc
     2821 aatggccata cgcaacaagc tccgggctgg ctcgattttt atgccgtata caccccgcaa
     2881 cacactacat cggcatccaa ctggctgaac aacaatgcgc accgcatgaa tcagatggag
     2941 ttttcccatt tcctgaccaa caatgcccgc aacatcgtat ccaaaaatcc cggtaacgaa
     3001 aattccgttt acccgaccgc cgccgaagta ttggatttcg cgctcaatct cgagtacacc
     3061 gaaaaaacca ccttcaaaca aggctatcgt gaacaggacg gcagaatcaa ctttaccttc
     3121 caatccgaag actcagggca aacagagaaa aacctcaaaa tgtttgaacg tttcggcatc
     3181 gagttcaccc cgcatcaagg cggtgcatcc tactttgttg aagccctgtt gaaattccgc
     3241 atcgacaaaa acagcggcgc actcgtcctg tggtacgaat tgcagcaaat cgatgctgta
     3301 atcgaacaag cggcaaaaga catttccgaa gccgtacaaa aagccttccc tgaaatcgac
     3361 atctatttcg gcgtaatcgc ctaaaaaaaa gtcgtctgaa atcgtgaacc ttcagacgac
     3421 ctccacaaaa acccaaatcc gaaagacccc aaaatgacca tcacagaaga atactccatc
     3481 gacatccgag taacctcaga acaggggaaa aacgactacg gctaccccac cgaacgctac
     3541 ggatgcgaca tcatcaacac agacggggag ctacttgtcg gcatagagcc agagtacaaa
     3601 accccctttg ccgccgtcag aaaggcgctc atctgtctga caaaagacaa cctcaaaaac
     3661 gctgcctgat attaagccgt taccccaata atgaggaatc aaaatgaaat acttgatccg
     3721 caccgcctta ctcgcagtcg cagccgccgg catctacgcc tgccaaccgc aatccgaagc
     3781 cgcagtgcaa gtcaaggctg aaaacagcct gaccgctatg cgcttagccg tcgccgacaa
     3841 acaggcagag attgacgggt tgaacgccca aatcgacgcc gaaatcagac aacgcgaagc
     3901 cgaagaattg aaagactacc gatggataca cggcgacgcg gaagtgccgg agctggaaaa
     3961 atgaactttc aggaagaaaa cgagaacatc aagaatgaca tagagattaa tctcttgcat
     4021 tccgctgaag ccgacagcgt ggaggcaatg atggacttgg cggtttacgg gctggcggcg
     4081 atggttgcca aacacaacaa aacgcgcggc gagcagcttg tgttacaggc gattgccggt
     4141 catatgcgga agcttttggc cgcgcttccc gaaaccgagt cattggtgca gaccgggaag
     4201 gtttaccgcc gacttgaaga tttgattttt aaaacgtatt tgccggagca gtaaagatga
     4261 acacgaatca agatacgatt ccatttggcg gcaaccttgt gatttgctgt tcgacgggaa
     4321 acggcgggga cgggcggttt tcttgtctga ttaccgatca gataccggat ttaaatcttg
     4381 tcagaagcgg gcaggcgttc ccgatgttca tttatgagta cgaaactaga gaaaaaagga
     4441 aagcctgatg gacaccctat taaaaatcat catcgcgctg tcattttccg gcgctgaggc
     4501 attggtggta tggcttttca tcacggccgc cgatgccgta ttacgccgct tccagaaacc
     4561 gagtcattac aggagagtaa aaaaatgaac atcaacgaac tgggcgcaag gatagaccgc
     4621 ccgaccatcc gcgaactgat tgcctacgca acctgccgca accgccccat ttcaaactcg
     4681 acactgctgc gtatggaaaa agacgggcgg ataccgtgcc gtctgaaaac cccactcaca
     4741 tcccccgtat gggacacccg cgaagttttg gaagccctgg ggttacagca ataaaaaaac
     4801 gcccgattag ggcgttttca cattcagacg gcttttgtat tccctactgc atcaaaccga
     4861 cgacaggttg cggatttcgg gcagcatcgg gcggattttt gccgcgtgtt ccgcgtcggc
     4921 gtgtgcgttt aaggcttcga gggcgtttgc ggcggctttg aggcggctgc gtgtttccgc
     4981 ccagaccgtc cacatcgtta ccgcctgttt gcagccgagc tgcttcagcg gcagggaaac
     5041 gtctctgccc atttggatgg cccacgcgcc gtatctgacg gcaacggcga ggtcgtacag
     5101 ggcgttgccg ctgatgggca gggcaggttg cggtgcgggc aatggttcgc ggtcgaggac
     5161 ttcgccgtac agcacgccgt tttcaactgc cacgcggccc atcacgctta aaacttcggg
     5221 gaactgttcg gcaggtactt ctttgtagct gcatccgaac ttgcttttga cggcagacca
     5281 aagggtaatg gcgatacgcg cctgcgcttc tttgggtgcg gatttggtca gggcgttgtg
     5341 cagttttttg acggcttcga tttgttcgcc ggtcaagccg tccggaaggg cgcgggtggg
     5401 tttgggggta actgttttta tgccgtctga aattttgccg ttaagtaaaa tttcaatctg
     5461 ctcatcgcac caaaccgcaa atttcggatt aagccaacgg gcaaagtgaa tagcgagttt
     5521 gggatgcagc catgtgcctt gctcactgcc accacgcttc acgataacta tttgatttgc
     5581 ttccgttagg atttttctcc taacgcttaa attctcagca agtgcagaga tatattgttg
     5641 agtttgttca ctttttaggt agtctttagg taacttgcca aagtgagatg caatggcggt
     5701 tgcatttaaa aaaccgtctt gacggaaaga tacaggggtg ttaccaaaat tgagaacaga
     5761 tacgttcatg atagtttcct agtttagttt cgaaagaccc aaatgggtgg tcgggaggtt
     5821 cgaaaaccta ctagaaaagg ccggcgttat tccccttgcg ggtattgtat tccgcaccct
     5881 cccgaccata ggaaactagt tcggatatat cgaaacaaac aaccaaacaa gaaaacttat
     5941 ggacgtaaaa aattcacgct gacggggtaa atgccgttct agtagaggtt ttcgacgcct
     6001 cgtgtttcgt aatatatcca atctttctat tttctgcaag cataaaaaag ccgccatgtg
     6061 gcggataggg tcgcggtctt caacagcatg taggatttag gaatgcccaa attgggcgca
     6121 ggggtgttga aaacacgcaa acaggcgcgc cgccagcctt acgggtaggc gcacccccac
     6181 ataggagtaa atcgatttga tacgtataga cgtaaaaaat tccactctat cgtgttggat
     6241 atacgctgtt tgtcaggtgt tttcaagcac cgtgggaaat attatataga gttatggaaa
     6301 tgtgtcaaga gaattagccc aaatgggcgg acgcgcggtt aagaacccac ataggagggc
     6361 ggacttattc ccctttcggg tcttgtattc gtcgcccacg cggtcataga aacttcctgc
     6421 tatcgaaaca aacaacaagg aaagaaaact atagacatga aaaaatcaca ttgacggagt
     6481 gattgccgct gtagtgtggt ttctgacgcc acgaacagga atataaaaca aaaccccctg
     6541 cacatgcaag gggtttccca aaaaaccgta ggcggcaaac tgaaaggccg tctgaatttc
     6601 agacggccta tgttgcggcg gatgttaagc tattaagcta tttggttttc agaggctttt
     6661 tcttccattt tcgggctacg gcttcaaatt cttgaaaggc cgtcggtgcg ctcctgatac
     6721 ggcgtatttc aaaaataaag ctgcttaggt tgtcccagtc acgtaacagc atggagtatt
     6781 cgaaatcttt atacattttc tcgtgcagtg ctccgcctaa tacgcccgca cagacaaatt
     6841 cgcgctggtt taaaactgtc agtatggctt cacggtcttt cttcttgtcc ggggtatccg
     6901 atgtataggt ggcgagtatg catccgtctg tttttgccag cccgtttact atggttatgg
     6961 cttcttgaag ggcggcattg ttacgttcgg ccatgatcag cgcgcttttt ggcgttttct
     7021 gtattcctca tgatgccgta agcggcaaca aaaacgccga taacagtcaa tatcggcgtt
     7081 gctatctgta ttaggttgtc agtcattgcc gtcccagccg tctgaaaggc ggaaatcacg
     7141 gctttccgaa taaatatgtc ccattgtcat ccccttaagc tgatgttgaa aataaatcct
     7201 tgcgtcggaa tatacggcat tgcttgacta ttttcaagat tctgtacctc gtgaaccgga
     7261 ctatacaaaa aaaccgcctt cgtgtaaagc ggttcttaaa tcgcccgtta aggcggacac
     7321 aacgatagcc aaactggaac aggaggcggc aaaggcgggt ttgtccaaaa cagccttgat
     7381 tgaaaggctg attggggatt tgtaggcgtt tgcagatacg acaaggggcg cattccgcgc
     7441 cccatcacac gcacggacgg cttgtcatcg cctgtcgccc gtgcgcggct gcccatattt
     7501 cagaacagtc ttgcaagccc ctttaaggga acggttttat tctagtacag tttgaatgcc
     7561 ttggcaacgg ctgttttaat cgcctgaaaa tcctcttcac tgattattgg aatgcagcgg
     7621 tcgcgccctt tgggtttgta tcggtctaat cgtgccaatc cgactgttgc cgtcatgtcg
     7681 cattttgccc aacattggat gtgcggcttg tccggtaagg ggtttccact cattttgtgg
     7741 tggtagtccg ccaaagggac aggttctgtg ctgcttaagg gtacgaccgt taccagtttg
     7801 ccgttgtgcc tgtttcgcgc tatgacgacg acagggcgtt tcttgaccat ttccggttct
     7861 tcataaccgc gaaagtcgca catgataacc gaacgttccc ttggttggaa ttttaaaggc
     7921 attagccgct cctgacgatg acaggctgct attatagcag ttcttacaca aaaaaccgcc
     7981 ttcgtgtaaa gcggttgcaa aaaagccttc caataaaaat gcggaaacgg ttttttattt
     8041 gcgtttccgc ataatacaaa cacacacaca aaaaaaaatc attttccgtt tttggcaagc
     8101 ctcaaaacat cattccccca ccgttccagc gcatccttac gctcctccca aagctccgag
     8161 cggttgtaag ccgtttgcgt cctcgtcccc aacgaatggg caagcagctt ttccgccaca
     8221 tcattatcca ccttcagaac ctcgcgcaaa taagtacgcg caagcgagcg caaaccgtgc
     8281 gccgtcgtat ccagccccgc ccgctgcatc gccacgcgcg gactttcctt attgatatgc
     8341 ccttgaaaat tcacactttc aaacacaaac cgcccgttca cattcaacgc ccgcgcctga
     8401 tccaacaccc actgcatcgc ccgcgacagc ggcacatcat gcccccgccg ctcctttttc
     8461 cgttcggcgg ggatacgcca aacctccccg tccaactccg accactccat caacgccgcc
     8521 tcctgaatcc gcgtcattgt caacagcagc caatagatac aaagccgcgt tacaggatgg
     8581 atacgcaccc tgcccgcata aaccgcaaat tcattgcgct gctccaaaaa atcaatcagg
     8641 cgcggcaatt cagacggact caacgctgcc atattccccg ttttcgcccg ttcaaacaca
     8701 cccgaaccga tttgcgcgac agggttgatt tccatcattc ccgaaccgac cgcaaacgca
     8761 aacaccatct tcagactgtt tttcgttttg cgcaacgtat caacgatacc gcgcgcctcc
     8821 atcacacgga ggcagccgac cacatccgcc gtcctgacct ggcgaatatc aagattgccg
     8881 atagccggaa aaacccaccg ttcaaaattc cgcataacct gtccggcata cttttcagac
     8941 cgccccttcg accaacgcac aaaccaatca cgcgtcacct tctcaaaagc aaaatccgcc
     9001 cgcaccttct tattgacgac attttccccg tgcgcccgtt ttcggcgcac ctcctcccgc
     9061 cattcccgcg catcggccag cgaaaaatca ggataccgcc ccagcgaaat tgtctgctgc
     9121 cttccatcct gcacaaacga cagcttccaa ctccgcccgc ccgtcgggta gacccacaaa
     9181 gccagcccgc ccccgtctga caacttatac agcttatcgc gcggcttcgc atttttaacc
     9241 tgatttgccg acagcggcgt aatgattttc gccattatgg taatttccca cttatccaaa
     9301 aattaccata tacattacca taaaaaaatg caataagaag ataccgcaag attgcaaatg
     9361 atttactttg acgcgttttg atagggcaaa ccgatgattt ttatatggta attgacacaa
     9421 cttgaacaaa aaagaaccgc cctgaatcag ggcggttttg ttttctggcg gaaacggtgg
     9481 gattcgaacc cacggaggat ttgcaccctc agcggatttc gagtccgctg cattcagcct
     9541 ctctgccacg tttccgaaag atgtttcaac ctaaaaggaa acacgatgaa gtaaaaccaa
     9601 ataaaaatgc cgatgcttta tgctacttca tttttatttg gtttttgacc tcaaggattg
     9661 gcggaagcgg tgagattcga actcacggag ggctatcaac cctcgacggt tttcaagacc
     9721 gttgcattaa accgctctgc cacgcttccg tcttcttgaa gagtaggaat aataatgaag
     9781 tttatacatt ttgccaagca cttttttcgg aaaatactta atttattgtt ttcattttat
     9841 ttgttccgaa cgcataaaaa cccattcgct ttcatttgaa gccgcgtcat tgaatgcgta
     9901 gccttcgtaa ttaaaatttt tcagcatttc agggtcggta atatgatgtt ctaccgcata
     9961 gcgcaccatt aatccgcgcg cgcgcttggc atagaaactg atgattttat atttaccgtt
    10021 tttttcgtct ttaaatatcg gggtaatcag ccgcgcccga agttttttcg tgttgacaga
    10081 cttgaaatat tcctgtgagg caaggttgac aagcgtattg ctgcctgctt gggcaagcgt
    10141 gtcatttaaa aggttggtaa tgatgtcgcc ccaaaactca tacaaattct tgccgcgcaa
    10201 attggcaaat gccgtcccca tttccaaacg atagggctgt atcaggtcta acgggcgaag
    10261 aagaccgtac agaccggaca gcaggcggac atggttttgc agatagcgta tctgtccaat
    10321 atccaatgtg tttgcatcca taccttcgta aacatcgccg ttgaacataa agaccgcctg
    10381 tttggcgttt tccggcgtaa acggcgtgtg ccattctgca ttgcgctgcg cgtttaagag
    10441 ggcaattttg tcggaaacgt gcatcagttc ggcaatctgt tgcggcgcaa gctcgcgcaa
    10501 ctgctgcatt agaatgtcgg actctgccag caggtcgggt tgggtaaact cgctgacagg
    10561 ggcagggtct ttttcgttaa ggtttttcgc aggggaaagg acaaaaaaca taatctgctc
    10621 ggtatagtgt caaacacggg gattttaagt ttaaacgtgt ttgcgggcaa gccgattaga
    10681 ttaaaagtga agtaaatacc gttacagcaa attcaaccgt aagatattga aaaatgccgt
    10741 ctgaacaaaa gttcagacgg cattttttta ttctttaccg atatagggaa acaatggttt
    10801 ccgcagcttt gacacaagtt gcgacatcgg caaccaaagc gatacgcaca taaccttccc
    10861 cgggattgcc ctgttcggta tcccgtgcca aaaagcgtcc gggcaatact tggatagcgg
    10921 ctttttgcca taaattgcgt gcaaatgcca aatcgtcgcc atcggggact ttcaaccaaa
    10981 tgtaaaacga ggcatctggt aatttaacat caaatacctg ttgcaaaatg ggaataacgc
    11041 gctcaaattt ttcctgatac aggcggcggt tgtcgataac gtgctgttcg tcatcccaag
    11101 cggcaatgct tgcgcgctgc acgggaatgc tcattgcact gccgtgatag gttctgtaaa
    11161 gcagaaagtt tttaagcagt tcggcatcgc cggcgacaaa accggaacgc aggcccggaa
    11221 cgttggaacg cttggacaaa ctggtgaaca taagcagttt ttgcctgctt cgacccaact
    11281 gtgcagcggc ctgcaggcag cctaaaggtt tgttgccgtc gaaatagatt tcggaatagc
    11341 attcatccga ggcaataatg aaaccatatt tatcctgtaa atcaaaaact tctttccatc
    11401 catccaaatc cagcacgctg ccgctggggt tgttgggcga gcagacgaac accagtttgg
    11461 tgcgtttcca aacctcttcg gaaatactac gccaatcggg gttgaaagac ggcgcggggc
    11521 aattggcaaa atggatttca ccgccgccca aaagtgtcgc accttcgtaa atctgataaa
    11581 agggattcgg gctgacaatt gcgggtttga tgccgtctga aacagggtcc aacacggttt
    11641 gaacaaaaga aaacaacgcc tccctactgc ctaaaaccgg cagaatttca ttatccgcat
    11701 ccactgtcaa gccatcataa cggcgtttta accagttcgc acacgcctga cgcagttcag
    11761 gcaaaccggc cgtcagcgga tatttttcca actcgtgcaa tgaggcggtc agcgcatctg
    11821 taatgacttt cggtgttgga tgtttcggtt cgccgatatg cagtgggacg gcttccagac
    11881 cttcgggggc ggaaatgccc tgcatcgctt cacgcagtcg ggcaaaggga tagggtttga
    11941 gttggttgag taaggtattc ataatgttct ccggttgtcg gtatatcgga agatatgccg
    12001 tctgaacctg acggcaccca tcagacggca ttttatattc aatgcaaacc cgtactgccg
    12061 aaaccgcctt ctccacggct gcttccgaca aattcttcga cacgtttgaa acgcgcctgc
    12121 acgattggaa cgataaccat ctgcgcgata cgctcaaacg gcttgacggc aaacggttcg
    12181 ctgcttctgt tccataacga caccttcaat tccccttgat aatcggagtc aatcaaaccg
    12241 accaaattgc ccaaaacaat gccgtgttta tgccccaagc cggaacgggg cagcaaaacg
    12301 gcggcatatg aaggattggc caaataaatt gccaaacctg tcggcacaag aaacgtttcc
    12361 cccggctgca agacgacttc ctcatccaaa caggcgcgca agtccaaacc ggcagaaccc
    12421 gctgtcgcat aggtagggat aaaatccgcc atcctctcgt ccaatacttt catttctact
    12481 tcaatattca tcgtcttgct cctgcatacg gccggtttca aagatgggag attatacaca
    12541 agccatgttt acgctgaaac acagcaaatc ggttttgttt tgaaatccgt tgccaatgta
    12601 taatacccgc ccttccggtt atgaagacga acattatgca cacactaagg caacttatca
    12661 gaaatgactg aaactcaaaa aactggattc ccactttcgt gggaatgacg tggtgcaggt
    12721 ttccgtacga atggattcgt cattcccgcg caggcgggaa tctagacctg tcggtttcgg
    12781 tttttttggc tagtgccgca acattaaatt tctagattcc cactttcgtg ggaatgacgg
    12841 gatgtatagt ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagagaac
    12901 gattctctaa ggtgctgaag caccaagtga atcgattccg tactatttgt actgtctgcg
    12961 gcttcgtcgc cttgtcctga tttttgttaa tccactatac ccataaaaat gccgtctgaa
    13021 cattgatttt cagacggcat cggcaaaaca gccctatttt ttacgattag agaaggcttc
    13081 acagccgaca tctgaggaca aggtctccaa atgggctcgg gcagaagcgg catcacggca
    13141 tttgtatccg tcgcccacgc tgttcatcca taccgacaaa gtataacccg tccccgtctt
    13201 tggaacgccg accaagctgt atgcccttgg tttttcctta ttgacaaaat gcaccgaaac
    13261 attatatttt tcggcaattt tcggattcat cttatagcct gagacaaata tttccagttt
    13321 gctcttgatg gtctgattat cgtccagggg acttttcaaa ataaactgtt tggaaatatt
    13381 gttgataccg accatctccg tataaagctg ggactgatag cctctttcaa tataactctg
    13441 ataagaaggt atggcaatga cgctgatgat gccgagtatc gcgacgacta tcatcatctc
    13501 aatcaatgta aacccttttt gttccatttt attactcatc attattgctt acataagatt
    13561 gaaggacgac cacggtattg gcattcttac cccaagcctt ggcagtaacc cgataaacat
    13621 tttctccgtt cttcacgccc aaatattcga taatatagcg cggtggtttg ctgacgcttc
    13681 ccttgccttt cttatattcc atccctttct tgtcaatgca caggtcggta gaatttgcag
    13741 ggcaaaaacg cttcaccgcc tcaacggtgg gcttgccttg caccacgata ttgtcaaaag
    13801 cctcttcatt atcattattt gtccgcacat tcactgcggt acacagacct tttccacagt
    13861 tttcgctaaa tgtaacctta ctgtccgtat catattccaa atccaaaacc tgaagttcgc
    13921 cttcccgcaa agccgcctcg gccaaagaca aagccaattt cctgtctgat tcgttggcac
    13981 tgatccgctg ctcggtattg taagactgcg cggcagttac aaccaaaaaa gccacgacga
    14041 tcatcaccat cagcacgata aacagtgcaa accccctctg tccgtcagaa gtcgggattc
    14101 ccgtcaaagt gttctgtttg cgcatacatt tcccccgcgt attgtcgcat cgatacggta
    14161 agcataaata tgattgtctg aagaagcggc aatcttggta tcagtaccgc tactcaataa
    14221 aacctccacc ccggcgggcg taacagcatc ttgggcgctg ttgaatttat ccgtatatct
    14281 gaatgtttcc tctttgccgg catcgtcatc ttcaggacag tcggaaacat agatataccg
    14341 cactttcata tatctaatct ttttcgcgag caactgagga ttaccccact tgcccttatc
    14401 atccaattgg aagcggaaca aaccttcctc accggcaatc ctgccgaccg cataggcatt
    14461 gaccacatgc ctttgacgcg ctatattgcc attttgctcc ttatcctgat ccgaaatctt
    14521 caattctttt tttacatttt ctaaagtaag gatttgcttg cccggtttcg atattgcggc
    14581 acagctgctg acgacggtag tcgcggcgct tgcattaaca tcatcgattc cgtattgaaa
    14641 aatcaatgcg ctaccaacct ggaaaaaatt ctgataattg atatctaaag attccgttat
    14701 ggggataagt ttattatctg taccgttggg gataagttta tttgcactgc tcccttttaa
    14761 ggaaaaaaga cggttttttt gcggcacatc ggaaacaaca tccttttcgg tatgctcaga
    14821 catattgaaa caaccgaagc tccccgccat tcttgcatcg cggacaatta atgttgccgc
    14881 attccgcaaa tcctgttgaa tagcaagacg ctcgtttgcc gcatcattta atttccggga
    14941 cgtgaagtaa ctcgatccga ccgccatcag gacaatcata ctgagcatgc ccgcaaccaa
    15001 aaattcaata atggtaaaac ccttcatacc atcataactg ccttttggta cgtttagcat
    15061 tttacgtctc attcccgacc tccgaccctt gcctgatagg tatatacgat attgttgccg
    15121 ttcgtctcaa gattcgtacg ggcgatatcc gaatcccctg ccgaatcatt tacccacaat
    15181 actttaatca aagtatcccc gtttgcctta ttgtcgcaat ttgaagaaaa agtactgccg
    15241 gcggacaatg tcggcgcagc acccgacgaa tccttgcaga cggcgtaata gatggctgcc
    15301 gcatcctgca aggcattttt caattcataa ccgaacctgt ccaactgggc ttttgccaaa
    15361 tccttcttgc ttttcacggc atcaaccgca aaatcgccat ccacagctga tagtgtatga
    15421 tggtttccca tgtaaagatt atagtttttc ttgttgctgt ccgaatcaat ggtcggattc
    15481 atcaacattc cctccatcag gttttgcgtg atttgactga cgatggtttg cgtctctgcc
    15541 tccctgacgg aagcgactgt ccgcaactga acagacaata gtgccaaaat accgatggtc
    15601 agaacgagca tagcgaccaa gacttctatc agcgccatac cggactgggg gtttttcagg
    15661 cggaagcaat cattattctt cattttttta tttcccaaat cgactaaaac aatcatttat
    15721 attggcatac ggtacgccta tcgtttctag gacaaacctc aaccctgccg ctgctgtcaa
    15781 tcaaaaccac cgccgaacgg aatttcttat cggcatctga aactgctctc gcatctgtca
    15841 gcacgatttg gatataaccg tcggaataaa aaaagctgga ttgttttgta agatgctggt
    15901 ctttcgtata accgaacgtc ccgttttgat tgaatgtcca aactacacgg tcggtggtcg
    15961 gctgagtctg accaaaagcg atatggttga aggcataatt aatccgctta tcattgatat
    16021 catcattcaa taccacactg cggaggagaa catccgccgt atcattgtca tatcccttat
    16081 tgccgttttt gtcgccgaaa gccaacattc cctgcccctt cttgccggag tcacatttat
    16141 tgttgaccgt accgtctttt ttaacttgaa caggacagat atagacaggg agattgagcc
    16201 ggacggcttc gcccctggag aaacgcaaaa ggttggcaat ccgctccgcg tgactggcaa
    16261 tgcggcggga tgcaatccat tggctcatat tggggagggc tatcatcgcc ataatggctg
    16321 caatgaccat cacgatgagc agctctgtta gcgtgaaacc ttgttgtttt cgtgtacaca
    16381 taagcaatag aacgttaact ggtaatgtat agtggattaa attcaaacca gtacggcgtt
    16441 gcctcgcctt agctcaaaga gaacgattct ctaaggtgct caagcaccaa gtgaatcggt
    16501 tccgtactat ttgtacggtc tgcggcttcg ttgccttgtc ctgatttttg ttaatccact
    16561 atattttcaa ttatatgcgg gctgaatgca aaaatgcctc aagaccgcgt tttatttttt
    16621 agggcaatct ctaagcatga ttttaaacga ttttgcctga tttcgcctaa taaattttta
    16681 tatagccatt taatcctcta tctttgcctc ctcgggaata taggcagcat tgtcgaattt
    16741 ggtgaattgc cccgtccatg tgaggaagat tttaccgacg ggaccgttgc ggtgtttgcc
    16801 gatgatacat tcggcaaggc ctttcatggg tgagtcctgg ttgtagtatt cgtcgcggta
    16861 catgaacata atcaggtcgg catcttgctc gatagcaccg gattcgcgga ggtcggacat
    16921 catcgggcgt ttgtcggtac gcgattcgac ggtacggctc aattgcgaca gggcgatgat
    16981 ggggacttgc aattctttcg ccaacgcttt gagcgaacgt gaaatttcgc ccagctctga
    17041 agctcggttg tcggaacggc cggatcctgc catcagttgc aggtagtcga tgacgattaa
    17101 tcccagctta ttgttaaatt gacgggcgag acggcgggca cgggcgcgca gttcgagcgc
    17161 ggtcagaccc ggggtctcgt cgatgtacac gggcgcgtcg gagagtttga cgactgcttc
    17221 gttcaggcga ccccagtgtt cgtcttcgag cctgccggtt ttcaaaacgc tttgatccag
    17281 ccgtccgacc gagccgagca tacgcatgac cagttgcgcc ccgcccatct ccattgagaa
    17341 gacggcaacc ggcagcttgc cttctacggc aacgtgttcg gcgatattga tagaaaaggc
    17401 ggtcttaccc atagacggac gaccggcaac aataatcagg tcgccgggct gaaggcccga
    17461 ggtttttttg tcgaggtcga tgaaccccgt cggcacgccg gtaacttcat cgggattgtc
    17521 gcgcgagtag agcatatcga tgcgctgtac gacttctttc agcaaatcgg gcatctccaa
    17581 aaagccctgc ttggatttgg cggtgctttc ggcgatttgg aatactttgt tttccgcctc
    17641 gtccaaaagc tgccccgcgt ccctgccttg cggattgtat gcgctgcggg cgatttccgt
    17701 ccccacttcg gcgagttggc gcatgatgga acgctcgcgc acgatttcgg cgtagcggcg
    17761 gatgttggcg gcagacgggg tgttttgcgc cagcgtaatc agatattcga atccgcctgc
    17821 cgcttccaat tcttcgttcc gctgcaaatc ttcctgaacc gtaatcacat cggcgggacg
    17881 gctctcattg attaatttag caatggatcg gaaaatcagg cggtgttcgt ggcggtagaa
    17941 gtcttcaccg gaaaccacat cggcaatcct gtcccaagcc ggattttcca gcatcaaacc
    18001 gcccaaaacg gattgttccg cctccatcga atgtggaggc agcgacaatg cgccgacctc
    18061 acggtcttca gacggcatag cggcgtaatc gttcatggta catcctatct gtcgtgccga
    18121 aattgcaatc ttctattata gcgtaaagca ggttcaattg gtttccatcc ctcaaaacag
    18181 gtagaatgcg tgtgctgccg attcgtttgc agcaacactg ccaaaacaca acatccaaaa
    18241 acaacattag gagcacaaaa tggaacataa gctgccgcaa ctgccttatg aaccggacgc
    18301 attgtccccg catctgagca aagagacttt ggaattccac tacggcaaac accatcaaac
    18361 ctacatcacc aacctgaaca atcaaatcaa aggcaccgaa tttgaaaacc tgcctttgga
    18421 agagattgtg aaaaaatctt cgggcggcgt gttcaacaac gcggcacaaa cttggaacca
    18481 caccttctac tggctgggtt tcacgcccaa aggtcaaggc aaaccttccg gcgaactggc
    18541 cgccgccatc gacgcgaaat ggggcagctt cgagaaattc caagaagcgt tcaatgcctg
    18601 cgcggccggt actttcggct ccggttgggc atggctggtg aaaacccctg ccggcggatt
    18661 ggatttggtt tccacttcca acgccgctac gccgctgacc actgaaaaca cgccgctgct
    18721 gacctgcgac gtgtgggaac acgcctacta catcgactac cgcaacagcc gccccaacta
    18781 cctgaaaggt ttctgggaaa tcgtcaactg ggacgaagtc gccaaacgct tcgccgcctt
    18841 gtcctgattt ttgttaatcc gctataaaga ccgtcgggca tctgcagccg tcattcccgc
    18901 gcaggcggga atcta
//
LOCUS       DBBZXU010000031        18392 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.031, whole genome shotgun sequence.
ACCESSION   DBBZXU010000031 DBBZXU010000000
VERSION     DBBZXU010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.031"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            138..572
                     /locus_tag="ACJJDE_000934"
     CDS             138..572
                     /locus_tag="ACJJDE_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4124 domain-containing protein"
                     /protein_id="HGG7540878.1"
                     /translation="MNFALSVITFTLASFLPVPPAGAAVFTWKDGGGNSYSDVPKQLH
                     PDQSQILNLRTRQTKPAVKPAQADAGKRTDGAAQENNPDTAEKNRQLEEEKKRIAETE
                     RQNKEENCRISKMNLKAVGNSNAKNKDDLIRKYNNAVNKYCR"
     gene            complement(621..1964)
                     /locus_tag="ACJJDE_000935"
     CDS             complement(621..1964)
                     /locus_tag="ACJJDE_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HGG7540879.1"
                     /translation="MFHSVNVFTGETLYRRPAQDYAEFERRLADLKMRGGAFAQLGVT
                     ERAARLQKFADRLEAEKERFAEMVCEEVGRCLHECRAEIGKSIELIRYYARLAPELLA
                     HKTIATQASLSQVRFEPLGVVFAVMPWNYPVWQVLRFAVPAMCAGNACAVKPAPSVAR
                     VSQALFDLASDGIPLAGVWLDEAGTLKAVEDTDAMAFTGSTYTGRILAAHAGANLKKT
                     VLELGGSNAFIVMPDADLERAAAEACYSRFRDAGQSCNAAKRIIVTEAAADRFITLFL
                     AECAKLKMGDPKHPDTTLAPLHREDLRDRVHGQVEDAVSNGAVCLTGGKIPQGRGWFY
                     PATVLDRVNPACRVWREEVFGPAALILRAENEEHAIRLANDSPFGLGACIYTADTGCA
                     WRFAEKIQAGSVFINRHTSSDLRLPFGGVKDSGYGRELSEFGLYEFVNVKTYWQK"
     gene            complement(1969..2622)
                     /locus_tag="ACJJDE_000936"
     CDS             complement(1969..2622)
                     /locus_tag="ACJJDE_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HGG7540880.1"
                     /translation="MGLGMEIGKLIVAFLVLINPFSALSLYLDLTNGHSTKERRKVAR
                     TAAVAVFAVIAVFALIGGTLLKVLGISVGSFQVGGGILVLLIAISMMNGNDNPAKQNL
                     GAQPETGQVRPARNAGAIAVVPIAIPITIGPGGISTVIIYASAAKTYSDIALIIVAGL
                     VVSAICYAILIVAGKVSRLLGATGLTILNRIMGMMLAAVSVEIIVSGLKTIFPQLAG"
     gene            2773..3063
                     /gene="gatC"
                     /locus_tag="ACJJDE_000937"
     CDS             2773..3063
                     /gene="gatC"
                     /locus_tag="ACJJDE_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA];
                     GO_process: GO:0006450 - regulation of translational
                     fidelity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HGG7540881.1"
                     /translation="MALTLADVDKIARLSRLHLTAEEKEKSLQELNDIFTMVEQMQTI
                     NTDGIEPMAHPHEAALRLREDEVTETDRAAEYQAGAPEVRNRLYIVPQVIEE"
     gene            3126..4571
                     /gene="gatA"
                     /locus_tag="ACJJDE_000938"
     CDS             3126..4571
                     /gene="gatA"
                     /locus_tag="ACJJDE_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HGG7540882.1"
                     /translation="MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITI
                     DQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTA
                     TVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVA
                     ARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQAGPMAQTAE
                     DCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGVKIGLPKEYFGEGNSADVQTA
                     LQNTINLLKTQGAELVEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFG
                     DLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFAR
                     CDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGV
                     QLVGNYFAEAKILGAAHQIQLNSDWHGKRPE"
     gene            4568..5500
                     /locus_tag="ACJJDE_000939"
     CDS             4568..5500
                     /locus_tag="ACJJDE_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VirK/YbjX family protein"
                     /protein_id="HGG7540883.1"
                     /translation="MKQNRTFTFPDFRTVYSYAPLYRLQHLKYTLRKFFGKKEIYAFE
                     QFVNASPIRQGLFLHCPQNAYPLLREFVDRRFNCKRRLDAMTADFLMAEKLFGTDILH
                     QMEDYRFHLVLAHLSDGISLWLNRNDNCVEEGAWSLSLRDEAGNRLYMATFAFVGTHL
                     LTASVQGPAGEEAKDTVRRITKQLHGLRPQQLMVTALQYFAAVLGLDGAMGIAQKHQV
                     KLRWKLKKRVKMNYDAFWQEYGASLERDGYWHLPQTPARKDLTDIESKKRSMYRKRYE
                     MLDNMVAEMKDGLKTEARGISDGIQTEKPLRRTA"
     gene            5543..6973
                     /gene="gatB"
                     /locus_tag="ACJJDE_000940"
     CDS             5543..6973
                     /gene="gatB"
                     /locus_tag="ACJJDE_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HGG7540884.1"
                     /translation="MTWETVIGLEIHVQLNTKSKIFSGASTAFGAEPNAHAGVVECAL
                     PGVLPVMNREVVEKAIKLGLALDAKINRKNVFDRKNYFYPDLPKGYQISQLDLPIVEH
                     GKLEIVVGDDVKTINVTRAHMEEDAGKSVHEGLNGATGIDLNRAGTPLLEVVSEPEMR
                     SAAEAVAYAKALHSLVTWLNICDGNMAEGSFRVDANVSVRPKGQAEFGTRREIKNLNS
                     FRFLEQAINYEAEAQIEILEDGGKVQQATMLFDPEKGETRVMRLKEDAQDYRYFPDPD
                     LLPVIISDAQMQKAKAEMPELPKEMAARFVADYGVSEYDARLLTASRAQAAYFEEAAK
                     ESGQGKPTANWMNGELAAALNKEGMELADSPITAPRLAALVGKIADGTLSSKLAKKAF
                     EAMWAEPEATIAEIIEKHGLQQMTDTGAIEAMVDEVLANNAKAVEQFKSGNEKALNAI
                     VGQVMKASKGKANPAQVQELIKAKLA"
     gene            7065..8075
                     /locus_tag="ACJJDE_000941"
     CDS             7065..8075
                     /locus_tag="ACJJDE_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HGG7540885.1"
                     /translation="MNHTVTLPDQTTFAANDGETVLAAAARQNLNLPHSCKSGVCGQC
                     KAELVSGDIQMDGHSEQALSEAEKAQGKILMCRTTAQSDISINIPGYKADALPVRTLP
                     ARIESIIFKHDVALLKLALPKAPPFAFYAGQYIDLLLPGNVSRSYSIANPPDQEGILE
                     LHIRRRKNGVCSEMIFGSEPKVKEKGIVRVKGPLGSFTLQEDSGKPVILLATGTGYAP
                     IRSILLDLIRQNSSRAVHFYWGARHQDDLYALEEAQGLACRLKNACFTPVLSRPGEGW
                     QGRKGHVQDIAAQDHPDLSEYEVFACGSPAMTEQAKNLFVQQHKLPENLFFSDAFTPS
                     AS"
     gene            complement(8204..8836)
                     /gene="pdxH"
                     /locus_tag="ACJJDE_000942"
     CDS             complement(8204..8836)
                     /gene="pdxH"
                     /locus_tag="ACJJDE_000942"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HGG7540886.1"
                     /translation="MDLHNIREDYSKRELSEGDCADNPIEQFERWLDEAVRAQVNEPT
                     AVNVAAVDGRGRPNSRMVLLKEVNSEGFVFFTNYHSRKGRSLDAHPFAAMTFFWPELE
                     RQVRVEGRVERLAEKLSDEYFESRPYQSRLGAWASAQSEVIPNKAVLVAKAAAVGLKH
                     PLHVPRPPHWGGYIVIPDLIEFWQGRPSRLHDRIQYRLLDGGWIRERLSP"
     gene            9067..10116
                     /locus_tag="ACJJDE_000943"
     CDS             9067..10116
                     /locus_tag="ACJJDE_000943"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HGG7540887.1"
                     /translation="MSKQPTSKRQWRDGVAPSAKKTAKPFKSKARPKDETDKTASQPY
                     GQKASDGIKPQNLPKQRAAKAKKLVVRNPNQKIMEHARDLKERRSDLSRMEPERLQKV
                     LAASGVGSRREMEEWINNGWVTVNGKTAQLGDKVTPDDHVTVKGSIIKLKWADRLPRI
                     ILYYKQEGEIVSRDDPQGRVSIFDRLPQAASSRWVAIGRLDINTSGLLILTTSGELVQ
                     RFAHPSFEVEREYAVRVLGGLTGEQMRVLTEEGVMLEDGLAKVERIREQGGEGANKWY
                     NVVIKEGRNREVRRIFESQGLTVSRLVRVGFGPIGLPNRLKRGQFYELNPAEVANIIK
                     WADMLLPGERRRKKA"
     gene            complement(10185..11726)
                     /locus_tag="ACJJDE_000944"
     CDS             complement(10185..11726)
                     /locus_tag="ACJJDE_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HGG7540888.1"
                     /translation="MKFLDREASIAKPGFNRWLVPPAALAVHLAIGQIYAYSVFNAPL
                     TKLIGITESAAGDWKLTTVGWIFSIALAMLGASAALFGTWMERVGPRKAIFAAACCFS
                     LGFFVSAFGVSTHNLFLLYLGNGVIGGVGLGLGYIGPVSTLMKWFPDKPGMATGLAIM
                     GFGGGAMLASPLSVSLMNAFSNAASVGVVETFAVLGLLYLALMMFGAFTIRVPADGWK
                     PEGYIAPKTQNKLVSSNHVNVSQAMKTPQFWLLFWVLCLNVTAGIGVLGQASVMIQEL
                     FSETSIGRQAAVGAGAAAGFVSLLSLFNMGGRFLWSSVSDKIGRKNTYTIFFVLGSLL
                     YFAVPSIGEGGSKALFIIGFCVIISMYGGGFAAIPAYLKDLFGTYQVGAIHGRILLAW
                     STAAVIGPVLVNYIRQSQIDSGIPAAQAYSVTMYIMAGLLIIGLLCNLAVKSVHEKHH
                     EKDIKTAAHSGNPDDETAISDAYLVGEKVSGGGISVWWRWALAVIPLAYGVVMVFVKA
                     LDLFS"
     gene            complement(12019..13374)
                     /gene="xseA"
                     /locus_tag="ACJJDE_000945"
     CDS             complement(12019..13374)
                     /gene="xseA"
                     /locus_tag="ACJJDE_000945"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HGG7540889.1"
                     /translation="MSDFFHSDVLSVSELNAFAKSILENHLAGLWIAGEVSNLTRAAS
                     GHYYFSLKDSRAQVRCAMFKGAAARLAKPLKEGDHIEVAGKISIYETRGEFQITVNEV
                     RLKGLGQLYEAYERLKAQLQAEGAFAEERKKPLPVRPQCIGIVTSLAAAALRDVVTTL
                     KRRAPEIPVIVYPTPVQGTGSEFQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNE
                     EPVVRAIEACTVPVVSGVGHETDFTLADFVADVRAPTPTGAAELVSPNRQESLHRLAQ
                     AQGRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMKQNLRA
                     HTARFERQTQALQHYRPDVSVCKNNIVRLQTALPAAFSQLLTHRRQSLTAQAALLEAV
                     SPQHILERGFSVVKDTRGQVIRNADVLKQGQKLHITFADGETDVRVSKEQGQQDLFDC
                     I"
     gene            13571..14392
                     /gene="nadE"
                     /locus_tag="ACJJDE_000946"
     CDS             13571..14392
                     /gene="nadE"
                     /locus_tag="ACJJDE_000946"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008795 - NAD+ synthase activity [Evidence
                     IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) synthase"
                     /protein_id="HGG7540890.1"
                     /translation="MMRIFSTGGTMDTQAVITHIARWLDEYATQANAKGFVIGVSGGI
                     DSAVVSTLAARTGRPTLLLDMPIRQHPGQLERARLHIRNLQRQYANVSAQTADLTDTF
                     QTFEQTVGIHQTAFDNQPLSLANAKSRLRMLTLYYYGQIHGLLVTGTGNKIEDFGVGF
                     FTKYGDGGVDISPIADLTKTQVYRLAEALGVDEAIQKAPPTDGLWDTERTDEEQMGAS
                     YPELEWAMGVYGTRKPEDFEGRQREVLEIYTRLHRAMQHKINPIPVCRIPPELLG"
     gene            complement(14463..14936)
                     /gene="dnrN"
                     /locus_tag="ACJJDE_000947"
     CDS             complement(14463..14936)
                     /gene="dnrN"
                     /locus_tag="ACJJDE_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein DnrN"
                     /protein_id="HGG7540891.1"
                     /translation="MTDFSVWETAPFGATVDYILQRYHNVHRAQFEELVPLAQKVVQV
                     HADTFPAEIARLLADMQNELLMHMMKEERMLFPMINQGVGRGAAMPISVMMHEHEEHD
                     RAIARLKELTDNFQPPEGACGSWTRLYALAKEMVEDLNDHIHLENDILFARVLDS"
     gene            15234..15566
                     /gene="trxA"
                     /locus_tag="ACJJDE_000948"
     CDS             15234..15566
                     /gene="trxA"
                     /locus_tag="ACJJDE_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_process: GO:0006662 - glycerol ether metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HGG7540892.1"
                     /translation="MSSELIIHTSDAAFEKDVLNSDTPVLLDFWAPWCGPCKMIAPIL
                     DDIAAEFEGRLKVVKINIDDNEATPSRFGVRGIPTLMVFKNGEVVATKVGALAKGQLT
                     AFVEASIA"
     gene            complement(15619..16566)
                     /locus_tag="ACJJDE_000949"
     CDS             complement(15619..16566)
                     /locus_tag="ACJJDE_000949"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7540893.1"
                     /translation="MTDITPFANRLGKNIKHLMKWVKRNGIEAWRIYDRDIPQFPFAA
                     DVYGDRIHLQEYDTGWLMRPEEYEAWLAEVLEAVAFVTGFAPEQIRLKRRERQKGLQQ
                     YEKTGKAGDDFVITENGRKFWVNLDKYLDTGLFLDHRNTRKKVGETAAGKRFLNLFSY
                     TGSFTVYAATGGAASSETVDLSNTYLDWAKRNFELNGIDTERHKIVRADVFQYLQTAY
                     GEGRRFDLIVMDPPSFSNSKKMLDILDIQRDHKKLIDGAVKLLASDGILYFSNNLSSF
                     VLDDLVSEQYAVKDISKQSVPEDFRNKKIHRCWEIRHKS"
     gene            16894..18282
                     /locus_tag="ACJJDE_000950"
     CDS             16894..18282
                     /locus_tag="ACJJDE_000950"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7540894.1"
                     /translation="MSIKFADLNLDKNILSAVSSEGYESPTPIQAQAIPFALEGRDIM
                     ASAQTGSGKTAAFLLPTLQKLTKRSEKPGKGPRALVLTPTRELAAQVEKNALAYAKNM
                     RWFRTVSIVGGASFGYQTRALSKPVDLIVATPGRLMDLMQSGKVDFERLEVLILDEAD
                     RMLDMGFIDDIETIVEATPSDRQTLLFSATWDGAVGKLARKLTKDPEIIEVERVDDQG
                     KIEEQLLYCDDMRHKNRLLDHILRDANIDQCVIFTSTKAMTEVIADELYEKGFAANCL
                     HGDMPQGWRNRTLMDLRKGRCKILVATDVAARGIDVPTITHVINYDLPKQAEDYVHRI
                     GRTGRAGRTGIAITFAEVNEYVKVHKIEKYINRKLPELTIEGMEPTRKRKSAGGKPKG
                     KGGWGDRKSGGWRGDHKPSKEGFGGKTRGEGFKKEGFKRDGFKKTGEGFKGKRKAGDS
                     FAGKGERRYKDR"
BASE COUNT         4629 a         5380 c         4647 g         3736 t
ORIGIN      
        1 gggaatctgt ttcaccccaa tatataaagc accatattaa ggcggagttt cttccccact
       61 ttgacccgaa cccggaaaag acaccgccca agccaatcct gatgctgccc cgacagccaa
      121 cccttaagga aaccctaatg aactttgctt tatccgtcat cacatttacc ctcgcctctt
      181 tcctgcccgt cccgcctgcc ggagccgccg tctttacttg gaaggacggc ggcggcaaca
      241 gctattcgga tgtaccgaaa cagcttcatc ccgaccaaag ccaaatctta aacctgcgga
      301 cgcgccaaac caaaccggcg gtcaaacccg cccaagccga cgcagggaag cgcacagacg
      361 gcgcggcaca ggaaaacaat cccgacactg ccgagaaaaa ccggcagctt gaggaagaaa
      421 agaaaagaat tgccgaaacc gaacggcaga acaaagaaga aaactgccgg atttcaaaaa
      481 tgaacctgaa ggcggtggga aattcaaatg caaaaaacaa ggatgatttg attcggaaat
      541 acaataacgc cgtaaacaaa tactgccgtt gagcagcctc atcgaaaacc ccatgccgtc
      601 tgaagcggca cggggtttgt ttatttctgc cagtaggttt tgacgttgac gaactcgtac
      661 agcccgaatt cggacaattc gcgcccgtaa ccggaatctt taacccctcc gaaaggcagg
      721 cgcaaatcgc tgctggtatg gcggttgata aacaccgatc ccgcctgtat tttttcggca
      781 aaccgccagg cgcatccggt atcggcggta taaatgcagg caccgagccc gaacggggaa
      841 tcattggcaa ggcggatggc atgttcttcg ttttcggcgc gcaaaatcag ggcggccggc
      901 ccgaatactt cttctctcca gacgcggcag gcaggattta ccctgtctaa aaccgtcgcg
      961 ggataaaacc agcctcgccc ttgtgggatt tttccgccgg tcaggcatac cgcgccgttt
     1021 gaaacggcat cttcaacctg cccgtgaacc ctgtcccgca aatcttcgcg gtgcagcggt
     1081 gcaagcgtag tatcgggatg tttggggtcg cccattttca atttagcgca ttcggcaaga
     1141 aacagcgtga taaaacgatc ggctgcggct tcggttacga tgatgcgctt ggcggcgtta
     1201 cacgattgcc ccgcatcgcg gaaacgggaa taacaggctt ctgcggcggc acgctccaaa
     1261 tcagcatcgg gcatcacgat aaaggcgttg ctaccgccga gctccaacac ggttttctta
     1321 aggtttgcgc ccgcgtgtgc cgcaaggatg cgccccgtat acgttgaacc ggtaaacgcc
     1381 attgcatcgg tatcttcaac cgccttgagc gtgcccgcct catccagcca cacgcctgcc
     1441 agaggaatgc cgtctgaagc caaatcgaac agtgcctgac tgacgcgtgc cacgctgggc
     1501 gcgggtttga cggcgcacgc gttgcccgcg cacatagcgg gaacggcgaa acgcaatacc
     1561 tgccagacgg gatagttcca aggcatgacg gcaaacacca cgcccaaagg ctcgaagcgc
     1621 acctgactca aactcgcctg cgtcgcgatg gttttgtggg caagcagttc gggggcaagg
     1681 cgggcgtaat agcgtatcag ttcgatagac ttgccgattt ccgcacggca ttcgtgcaag
     1741 cagcgtccga cttcctcaca caccatttcc gcaaaacgct ctttctccgc ctccaaacgg
     1801 tcggcaaatt tttgcaggcg cgcggcacgt tcggttacgc ccagttgcgc gaacgccccg
     1861 ccgcgcattt tcaaatccgc cagccgccgt tcaaactccg cataatcttg agctggacgg
     1921 cggtaaagcg tttcgcccgt aaatacattg acactgtgaa acatcgaatc aacctgccag
     1981 ttgcgggaat atcgttttca gtcccgacac aataatctcc accgataccg ccgccagcat
     2041 catacccatg atacggttta aaatcgtcag ccccgtcgcg cccagcaggc ggctgacctt
     2101 cccggcaacg attaaaatgg cataacaaat cgcactgacc accaaaccgg ccacgataat
     2161 cagcgcgatg tcgctgtacg ttttggctgc cgaagcgtaa ataatcacgg tcgaaatacc
     2221 gcccgggccg atggtgatcg gtatggcgat gggcacgacg gcaatcgctc cggcattgcg
     2281 ggcggggcgc acctgccccg tttccggctg cgcgccgaga ttctgcttgg cgggattgtc
     2341 gttgccgttc atcatcgaaa tggcaatcag caacaccaaa attccgccgc cgacctgaaa
     2401 cgaaccgacg ctgatgccca aaaccttcag cagcgtaccg ccgatcagcg caaataccgc
     2461 aatcacggca aacacggcaa cggcggccgt ccgcgcgacc ttcctgcgct ccttcgtgct
     2521 gtgcccgttg gtcaggtcaa ggtaaagcga caacgcgcta aacggattaa tcagcaccaa
     2581 aaaagccaca atcagcttgc cgatttccat gcccaatccc attatttccc cctccttcaa
     2641 acccgtgcgg caggcatccg atgctgcaaa ttgccgccgc aacggatttt tccgttataa
     2701 ttaaaaattc aagcaatacg ccccatcata cccgaacgac ggtatcttta ccatcagaca
     2761 aggatgcttt tcatggcact gacacttgcc gacgtagaca aaatcgcccg actctcccga
     2821 ctgcacctga ctgcggaaga aaaagaaaaa tcgcttcaag aattaaacga cattttcact
     2881 atggtcgaac agatgcaaac catcaacaca gacggcatcg aaccgatggc gcacccgcac
     2941 gaggccgccc tgcgcctgcg cgaagacgaa gtaaccgaaa ccgaccgcgc cgccgaatat
     3001 caggcgggtg ctccggaagt acgcaaccgt ctgtacatcg taccgcaagt tatcgaagaa
     3061 taatccgaat atgcttcaga cggcatcagc aataccgccc gaagcccttt aaggatggaa
     3121 gatttatgac ccaatacaca ttgaaacagg caagcgtcct gttgcagtcc aaacagattt
     3181 ccgccgtcga actggcaagc gcataccttg ccgccatcgc cgaaaaaaat cccgccctca
     3241 acggctatat caccatcgac caagataaaa cccttgcaga agcccgtgcc gccgacgaac
     3301 gtatcgcgca gggcaacgcc tccgcgctta ccggcgtacc cgtcgcctac aaggatattt
     3361 tctgccaaac cggctggcgc agcgcgtgcg cttccaaaat gctcgacaac ttcatctccc
     3421 cctacaccgc caccgtcgtc caaaacctgc tcgacgaagg tatggtaacg ctcggccgca
     3481 ccaatatgga tgagttcgct atgggttcga ccaatgaaaa ctcattctac ggtgcagcca
     3541 aaaacccatg gaatcttgag cacgtccccg gcggttcgtc aggcggttcc gccgccgtcg
     3601 ttgccgcgcg cctcgcccct gccgcgctcg gttcggacac cggcggctct atccgccagc
     3661 ctgcatcgca ctgcggcatt accggcatca aacccacata cggcacggtt tcccgcttcg
     3721 gtatggtcgc ctacgcctcc agcttcgacc aggccggtcc gatggcgcaa accgccgaag
     3781 actgcgcgat tctgttgaac gcgatggcag gtttcgaccc caaagactcc accagcctcg
     3841 aacgcgaaaa agaagactac acccgcgatt tgaaccaacc gctcaaaggc gtgaaaatcg
     3901 gcctgcccaa agaatatttc ggcgaaggca acagcgccga tgttcagacg gcattgcaaa
     3961 atactatcaa cctcctcaaa acccaaggcg cggaattggt cgaagtttcc ctgccgcaaa
     4021 ccaagctgtc catccccgcc tactacgtcc tcgcctccgc agaagccagt accaaccttt
     4081 cacgttacga cggcgtacgt tacggacacc gtgccgccca attcggcgat ttggaagaaa
     4141 tgtacggcaa aacccgcgcc gaaggtttcg gcagcgaagt taaacgccgc atcatgatcg
     4201 gcacttatgt actgtcacac ggctactacg atgcctacta tctcaaagcc caaaaactgc
     4261 gccgcctcgt tgccgatgat tttcagacgg catttgcacg gtgcgacctc atcctcgcgc
     4321 cgaccgcacc cactgcagcc ccaaaaatcg gagcggatgc ttcgccggtt gaaacctact
     4381 tgagcgatat ctacaccatc gccgtcaacc tcgccggact gcccgcattg accctgcccg
     4441 caggcttcag cggcggcgga ctgcccgtcg gcgttcagct tgtcggcaac tacttcgccg
     4501 aagccaaaat cctcggtgcg gcgcatcaaa tccaactcaa cagcgattgg cacggcaaac
     4561 gacccgaatg aagcagaacc gcacctttac cttccccgat tttcgcaccg tttacagcta
     4621 tgcgccttta tatcggctgc aacatttaaa atacacattg cgaaaatttt tcggaaaaaa
     4681 agaaatttac gccttcgagc agtttgtcaa cgcatcccct atccgtcagg ggctgttcct
     4741 ccactgcccg caaaatgcct atccgctgct gcgcgaattt gttgacaggc gttttaactg
     4801 caaacgccgt ttagatgcga tgacggcaga ttttctcatg gcggaaaaac tgttcggcac
     4861 agacatcctg caccaaatgg aagactaccg cttccatttg gtcttggcgc acctttcaga
     4921 cggcatcagc ttgtggctca accgcaacga caactgcgtc gaagaaggcg cgtggtcttt
     4981 atctttgcgc gacgaagcag gcaaccggct gtatatggcg accttcgcct ttgtcggcac
     5041 acacctgctg acagcctccg tacaagggcc ggcgggtgaa gaagccaaag acaccgtccg
     5101 ccgcataacc aaacaactcc acggcttgcg tccccaacaa ctgatggtaa ccgccctgca
     5161 atatttcgcc gccgtactcg gcttggacgg cgcaatgggc attgcacaaa aacatcaggt
     5221 caaactgcgc tggaaactta aaaagcgtgt caaaatgaat tacgacgcat tctggcagga
     5281 atacggcgca agtttggaac gggacggcta ctggcatctc ccccaaaccc ccgcccgcaa
     5341 agaccttacc gacatcgaaa gcaaaaaacg ctcgatgtac cgcaagcgtt atgaaatgct
     5401 ggacaatatg gttgcagaga tgaaggacgg tctgaaaaca gaagcacgcg gcatttcaga
     5461 cggcatccaa acggaaaaac cgctccgccg gacagcctga cgcgaagact atcgaattga
     5521 tattttagag aaagaagctc ttatgacctg ggaaaccgta atcggcttgg aaatccacgt
     5581 ccaattgaac accaaatcca aaatcttcag cggcgcatcg accgcattcg gcgcagaacc
     5641 caacgcgcac gccggcgtag tggaatgtgc tttgccgggc gtactgccgg taatgaaccg
     5701 agaagtcgtt gaaaaagcca tcaaattagg cttggctttg gatgcgaaaa tcaaccggaa
     5761 aaacgtgttc gaccgtaaaa actacttcta tcccgactta ccaaaaggct atcaaatcag
     5821 ccagttggac ttaccgattg tcgaacacgg caaattggaa atcgtagtcg gcgacgatgt
     5881 gaaaaccatc aacgtaaccc gcgcccatat ggaagaagac gcgggcaagt ccgtacatga
     5941 aggcttgaac ggcgcgaccg gtatcgattt gaaccgcgcc ggcacgcctt tattggaagt
     6001 cgtatccgaa cccgaaatgc gctccgccgc cgaagccgtt gcctacgcca aagccttgca
     6061 cagcttggta acctggctga acatttgcga cggcaatatg gcggaaggtt cgttccgcgt
     6121 cgatgccaac gtatccgttc gcccgaaagg tcaagcggaa ttcggcacgc gccgcgagat
     6181 taaaaacctc aattccttcc gtttcttgga gcaggcgatt aattacgaag cagaagcgca
     6241 aatcgagatt ttggaagacg gcggcaaagt acagcaggca acgatgctgt ttgatcccga
     6301 aaaaggcgaa acccgcgtaa tgcgcctgaa agaagacgcg caagactacc gctacttccc
     6361 cgaccccgat ttgctgcccg tcatcatttc agatgcccaa atgcaaaaag ccaaagcaga
     6421 aatgcccgag ctgccgaaag aaatggcagc gcgtttcgtg gcggactacg gcgtgtccga
     6481 atacgacgcg cgcctgctca ccgcaagccg cgcacaggcc gcctattttg aagaagccgc
     6541 caaagagagc ggacaaggca agccgactgc caactggatg aacggcgaac tcgccgccgc
     6601 actgaacaaa gaaggcatgg aacttgccga cagcccgatt accgctccgc gcctcgccgc
     6661 gctggtaggc aaaatcgccg acggcacatt aagcagcaaa ttagcgaaaa aagcctttga
     6721 agccatgtgg gcagaacccg aagccactat tgccgaaatc atcgaaaaac acggtttgca
     6781 gcaaatgacc gataccggcg cgattgaagc catggtggac gaagtgctgg caaacaacgc
     6841 caaagccgtg gaacagttca aatccggcaa cgaaaaagcc ctgaatgcga ttgtgggaca
     6901 agtgatgaag gccagcaaag gcaaagccaa ccccgcgcag gttcaagagc tgattaaagc
     6961 caaacttgcc tgacaagcaa gatgccgtct gaaacccaaa tccgacgttc agacggcatt
     7021 ttcacagtct gaccacatta aaacagcata aaaaacaata ttccatgaac cacaccgtta
     7081 ccctgcccga ccaaaccacc tttgccgcca acgacggcga aaccgttttg gccgctgccg
     7141 cccgacaaaa cctcaacctg ccccattcct gcaaaagcgg tgtctgcgga caatgcaaag
     7201 ccgaactggt cagcggcgat attcaaatgg acggacactc ggaacaggct ttatccgaag
     7261 cagaaaaagc gcaaggcaag attttgatgt gccgcaccac cgcgcaaagc gatatcagca
     7321 tcaacatccc cggctacaaa gccgatgccc tacccgtccg caccctgccc gcacgcatcg
     7381 aaagtattat tttcaaacac gatgtcgccc tcctgaaact tgccctgccc aaagccccgc
     7441 cgtttgcctt ctacgccggg caatacattg atttactgct gccgggcaac gtcagccgca
     7501 gctactccat cgccaatccg cccgaccaag aaggcatttt ggaactacac atccgcaggc
     7561 gcaaaaacgg tgtctgctcg gaaatgattt tcggcagcga acccaaagtc aaagaaaaag
     7621 gcatcgtccg cgttaaaggt ccgctcggtt cgtttaccct gcaggaagat agcggcaaac
     7681 ccgtcatcct gctggcaacc ggcacaggct acgcccccat ccgcagcatc ctgctcgacc
     7741 ttatccgcca aaacagcagc cgcgccgtcc atttctactg gggcgcgcgt catcaagatg
     7801 atttgtatgc cctcgaagaa gcacaagggt tggcatgccg tctgaaaaac gcctgcttca
     7861 cccccgtatt gtcccgcccc ggagagggct ggcagggaag aaaagggcac gtacaagaca
     7921 tcgcggcaca agaccacccc gacctgtcgg aatacgaagt atttgcctgc ggctctccgg
     7981 ccatgaccga acaagcaaaa aatctgtttg tgcaacagca taagctgccg gaaaacttgt
     8041 ttttctccga cgcattcacg ccgtccgcat cataattccc cggtataaaa aagattcagg
     8101 ctttccgttc ggaacacaaa aaacttcccg tccgtatttt ccccataaaa aatgccgtct
     8161 gaagcccgat tccggttttc agacggcata tgttttttcc tgttcaaggc gacagccgct
     8221 cgcgtatcca gccaccatcc agcaaacggt attggatgcg gtcgtgcagc ctgctcggcc
     8281 tgccctgcca aaactcaatc aaatcgggaa tcacaatata gccgccccaa tgcggcggac
     8341 gcggcacgtg caaaggatgt ttgagtccga ccgccgccgc ctttgccacc aataccgcct
     8401 tgttcggaat cacctcgctc tgcgcacttg cccacgcacc caaacggctc tgatacgggc
     8461 ggctctcaaa atattcgtcc gacaacttct ccgccagcct ttcaacacgc ccttccacgc
     8521 gcacctgacg ctccagctcc ggccaaaaaa acgtcatcgc cgcaaatgga tgagcatcca
     8581 gcgaacgtcc cttacggctg tgataattcg taaagaaaac aaaaccttca gaattaactt
     8641 ccttcagcag caccatacgg ctgttgggtc tgccgcgtcc gtcgaccgcc gccacattaa
     8701 ccgccgtcgg ctcgttgacc tgtgcgcgta ccgcctcgtc caaccaccgc tcgaactgct
     8761 cgatcggatt gtcggcgcaa tcgccttccg acaattcccg tttactgtaa tcttcccgaa
     8821 tattgtgcaa atccatttac cgctcctctt gtcatttgaa agattctacc cccgcacgca
     8881 aaccgatttc aaccgttgca caaactttgc ctcgcttctc caaacctcag gacacaacga
     8941 tttcatccgc aaaaccgccg cataaggtac aatatcgaac cgtccgaccg agggcggcat
     9001 tttatcaacc cgtcctgccg cacacgccgc agaagaaccg ccttatcagg cgagttagga
     9061 aaaatgatgt ccaaacagcc caccagcaaa cgccaatggc gcgacggcgt agccccgtct
     9121 gccaagaaaa ccgccaaacc tttcaaaagc aaagcccgtc ccaaagacga aacggacaaa
     9181 accgcatccc aaccttacgg acaaaaagct tcagacggca tcaaacctca aaacctcccc
     9241 aaacagcgcg ccgccaaagc caaaaaactc gtcgtccgca atcccaacca aaaaattatg
     9301 gaacacgcgc gcgatttaaa agaacgccgc agcgacctat cgcgcatgga acccgaacgc
     9361 ctgcaaaaag tgcttgccgc gtccggcgtc ggctcgcgcc gcgaaatgga agaatggatc
     9421 aacaacggct gggtaacggt caacggcaaa accgcgcaac tgggcgacaa agtcaccccc
     9481 gacgaccacg ttaccgtcaa aggcagcatc atcaaactca aatgggccga ccgcctgccg
     9541 cgcatcatcc tatattacaa acaagaaggc gaaatcgttt cccgcgacga cccgcaaggc
     9601 cgcgtcagca tattcgaccg cctgccgcag gccgccagca gccgctgggt cgccatcgga
     9661 cgcttggaca tcaacaccag cggacttctg attctcacca cctccggcga actcgtccaa
     9721 cgtttcgccc accccagctt cgaagtcgaa cgcgaatacg ccgtgcgcgt cttgggcggg
     9781 ctgaccggcg aacaaatgcg cgtcctcacc gaagaaggcg tgatgctcga agacggcttg
     9841 gcaaaagtcg aacgcatccg cgaacaaggc ggcgaaggcg cgaacaaatg gtacaacgtc
     9901 gtgattaaag aaggccgcaa ccgcgaagtg cgccgcattt ttgaaagcca agggctcacc
     9961 gtcagccgcc tcgtgcgcgt cggcttcggt cccatcggac tgcccaaccg cctcaaacgc
    10021 gggcagttct acgaactcaa ccccgccgaa gtcgccaaca tcatcaaatg ggcggacatg
    10081 ctgctgccgg gcgaacgccg ccgcaaaaaa gcctaaaccc gccaaaacac aaaaatgccg
    10141 tctgaaacat ctgctgtttc agacggcatt ttattcgggc gttttcagga gaaaaggtcg
    10201 agtgctttga caaagaccat caccacgccg taggcgagcg gtatgacggc caatgcccaa
    10261 cgccaccaga ccgatatgcc gccgccggaa actttttcgc ccacaaggta agcgtcggat
    10321 atggcggttt cgtcatcggg gttgccgctg tgtgcggcgg ttttgatgtc tttttcgtgg
    10381 tgtttttcgt gtacggattt gacggcgagg ttgcacaaca aaccgataat cagcagaccc
    10441 gccatgatgt acatggttac gctgtatgcc tgtgccgccg gtatgccgct gtcgatttgg
    10501 ctttggcgta tgtaattgac cagtaccggg ccgatgacgg cggcggttga ccaggccagc
    10561 aggatgcgcc cgtgaatcgc gccgacctga taggtgccga acaggtcttt caggtaggcg
    10621 ggaatggcgg caaatccgcc gccgtacatg gaaataatca cgcaaaagcc gatgatgaac
    10681 agggctttgc tgccgccctc gccgatggag ggaacggcga aatacagcag cgaaccgagt
    10741 acgaagaaga tggtgtaggt gtttttgcgt ccgattttgt cggaaacgct cgaccacaaa
    10801 aagcgtccgc ccatgttaaa caggctcagg aggctgacga agcctgccgc cgcacctgcg
    10861 ccgactgctg cctgcctgcc tatggaggtt tcggaaaaga gttcctgaat catcacggat
    10921 gcctgaccca atacgccgat gccggcagtt acgtttaggc acaataccca gaacaacagc
    10981 caaaactgcg gcgttttcat ggcttgggac acgttgacat gattgctgct gaccagcttg
    11041 ttttgcgttt tcggcgcgat atagccttca ggtttccagc cgtcggcagg tacgcggatg
    11101 gtaaacgcgc cgaacatcat cagtgcgagg taaagcagtc ccaatacggc aaaggtttca
    11161 acaaccccga ccgaagcggc gtttgaaaag gcgttcatca gtgatacgga aagcggtgag
    11221 gccagcattg cgccgccgcc gaaacccata attgccaaac cggtcgccat acccggcttg
    11281 tcgggaaacc atttcatcag tgtggaaacc ggcccgatgt agcctaagcc taagcctacg
    11341 ccaccgatga cgccgttgcc caaataaagc aggaagaggt tgtgcgtact cacgccgaat
    11401 gcggatacga agaagcccag gctgaaacag caggcggcgg caaatatggc tttgcgcggc
    11461 cctacccgtt ccatccatgt gccgaacagg gcggccgacg cgcccagcat cgcgagtgcg
    11521 atactgaaaa tccaacctac ggtcgtcagc ttccaatctc cggccgccga ttcggttatg
    11581 ccgataagtt tggtcagcgg cgcgttgaat acggaatagg cgtaaatctg cccgatggca
    11641 aggtgtaccg ccaatgctgc gggcggtacg agccaacggt tgaaacccgg cttggcaatg
    11701 cttgcctcac ggtctaaaaa cttcataaca tcctctttct gtcagttgaa aaataaaatt
    11761 tcatttgctc aatggaaact tattgaaaat tataaaaaaa tatcgggtcg ggtttttatc
    11821 cgccccaaga tgcgccgtct gaaacatttc gggtgtacgg aaaggtttct gttttttccg
    11881 acaaattcct gcggcttttc gcttccggat tcccgctttt gcgggaatga cgaattaaag
    11941 attatcttaa ggtcaaggga ctggattccc gctttcgcgg gaatgacggc ggagggggag
    12001 cggtttttcc gattgggttt aaatgcaatc gaacaaatcc tgctgccctt gttctttgct
    12061 tacgcgcacg tcggtttcgc cgtcggcgaa ggtaatgtgc agcttctgcc cctgcttcaa
    12121 aacatcggcg ttgcggatga cttgtccgcg tgtatctttg acgacggaaa agccgcgttc
    12181 caaaatgtgc tgcggcgaaa cggcttcgag caatgcggct tgggcggtca ggctttggcg
    12241 gcggtgggta agcagttggc tgaaggcggc gggcaatgcc gtctgaaggc ggacgatgtt
    12301 gtttttgcaa acggaaacat caggacggta atgttgcagg gcttgggttt ggcgttcaaa
    12361 acgggcggtg tgggcacgga ggttttgctt catagagtaa gacagcgttt gcgccagctt
    12421 gccgattgaa gcgcgctgct catcaagttt ttggcgcgga tgacggattt gccgcgcaag
    12481 ccagtcgagt ttttggctgg catcgaaata gcgttgttcc aaaacggttt tcagacggcc
    12541 ttgcgcctgg gcgagacgat gtagcgattc ttggcggttg gggctgacca gttccgccgc
    12601 gccggtcggc gtgggcgcgc gcacgtcggc gacaaaatcg gcaagcgtga aatcggtttc
    12661 gtgtcccacg ccactgacga cgggaaccgt gcaggcttcg attgcgcgta cgaccggttc
    12721 ttcgttaaac gcccacaaat cttcaatgct gccgccgccg cgacagacaa tcaacacgtc
    12781 gcattcggcg cgttgcgatg cggttttaat cgcttgggca atctgaaact cgctgcctgt
    12841 gccttgaaca ggtgtcggat aaacgataac gggaatttcg ggcgcgcggc gtttcaaggt
    12901 ggttacaaca tcgcgcaatg ccgccgccgc caaactggtt acgatgccga tacattgagg
    12961 gcggacgggc aacggttttt tgcgttcctc cgcaaacgcg ccttccgcct gcaactgcgc
    13021 cttcaaccgc tcataggctt cgtaaagctg ccccaaacct ttgagccgca cttcgttcac
    13081 ggtaatctga aattcgcccc gcgtttcata aatactgatt ttgcccgcca cttcgatatg
    13141 gtcgccttct ttcaaaggtt tcgccaaacg cgccgccgca cccttgaaca tcgcgcaacg
    13201 cacctgcgcg cggctgtctt tgagcgagaa ataataatgc ccgctggcgg cacgggtcag
    13261 gttggacact tcgcccgcaa tccacagacc ggcaaggtgg ttttccaaaa tacttttggc
    13321 aaatgcgttc aactcggaaa cggacaacac gtcagaatgg aaaaaatcag acatcgaatc
    13381 aatcaaatag taaaaaatat gaatatgttt tgaagcccaa ggcggcatag agccgcctaa
    13441 attgtcaaca atattataac acgcgccatc ttgccgcccg actttgcccg tatgactttt
    13501 ttaagcgggg aatgggaaaa atattcatca acctgcctgc aatctattca aattgaaccg
    13561 ccgacaagct atgatgcgga tattttcgac aggaggaacc atggatacgc aggcagttat
    13621 cacacatatc gcccgatggt tggacgaata cgccactcag gcaaatgcaa aaggattcgt
    13681 cataggcgtt tccggcggca tcgattccgc cgtcgtctcc acactcgccg cccgcaccgg
    13741 ccgccccacg ctgcttctgg atatgccgat acgccaacac cccggccagc ttgagcgggc
    13801 aaggctgcac atccgcaatc tgcaacggca atatgccaat gtaagcgcgc aaacggccga
    13861 tttgaccgac accttccaga cctttgaaca aaccgtcggc attcatcaga cggcatttga
    13921 caatcagccg ctttccctcg ccaacgccaa aagccgcctg cgtatgctga ccctgtacta
    13981 ctacgggcag atacacggac tgctggttac ggggacaggt aataagattg aagatttcgg
    14041 cgtgggattt tttaccaaat acggcgacgg cggcgtagac atcagcccga ttgccgacct
    14101 gaccaaaacg caggtttacc ggcttgccga agcattgggc gtggacgagg cgattcaaaa
    14161 agccccgccg accgacggcc tgtgggatac ggaacgcacc gacgaagaac agatgggcgc
    14221 aagctatccc gaactggagt gggcaatggg cgtgtacggc acgcgcaaac ccgaagattt
    14281 tgaagggcgg cagcgcgaag ttctggaaat ctatacgcgg ctgcaccgcg cgatgcagca
    14341 caaaatcaac ccgattcccg tgtgccgcat tccgcccgaa ttgttgggct gaaacgtgga
    14401 aatgccgtct gaagcggaaa aaccgtattt cagacggcat ggaaatatcc ggctcccgtt
    14461 ccttaagaat cgagtacgcg ggcaaacaga atatcgtttt ccaaatgaat gtggtcgttc
    14521 aaatcctcca ccatttcttt ggccaaagcg taaaggcgcg tccagcttcc gcaagcccct
    14581 tctggcggtt ggaaattgtc ggtcagctct ttgagccgtg cgatggcgcg gtcgtgttct
    14641 tcgtgttcgt gcatcatcac gctgatgggc attgccgcac cgcgtccgac accctgatta
    14701 atcatcggaa acagcatcct ttcctctttc atcatatgca tcagcagttc gttctgcata
    14761 tcggcaagca gcctggcaat ttccgccgga aaggtatcgg catggacttg gaccactttc
    14821 tgcgccagcg gcaccaattc ttcaaattgt gcgcggtgga cattgtggta gcgttgcagg
    14881 atataatcga cggttgcgcc aaagggggct gtttcccaaa cggaaaaatc agtcattgca
    14941 gtgttccttt tatagggttt cgggtttggt tttgaacatt catactttaa gaatctattt
    15001 aaacggagca tacaccgccc gcgcgtttct gtacagcttc aaaaacattc cttacacttt
    15061 gataataaaa gtaattttca aaaataaaat actgtccgaa ccgtttttta gaatttgcaa
    15121 aggcgattgg ggcggtacag aaaaactatt atcccgcccg cccacttgaa atttttatgc
    15181 ccaagcccta tcctgcacgc tatcgtgcca atcccaaccg aaaaggaaaa ataatgagca
    15241 gcgaattgat tatacacacc agcgatgccg cttttgaaaa agacgtttta aattcagata
    15301 cccccgtcct gctggacttt tgggctccgt ggtgcggccc ctgcaaaatg attgccccga
    15361 ttttggacga catcgccgcc gaatttgaag gccgtctgaa agtggtcaaa atcaacatcg
    15421 acgacaacga agccaccccg tcccgtttcg gcgtgcgcgg cattccgacc ctgatggtgt
    15481 tcaaaaacgg cgaagtcgtg gctaccaaag tcggcgcatt ggcaaaaggt cagctgaccg
    15541 cctttgtcga agcctccatc gcctgataaa gcgcaatcga aaaagccgcc ggaagattcc
    15601 ggcggctttt tcgcaccctt aagatttgtg gcggatttcc cagcacctat ggattttttt
    15661 gttgcggaaa tcttcgggaa cggattgttt ggaaatgtct ttgacggcgt attgttccga
    15721 taccaagtcg tctaagacga agctgctcag gttgttggaa aagtacaaaa tgccgtctga
    15781 agcgagcagc ttcaccgcgc cgtcaatcag ctttttgtgg tcgcgctgga tgtcgagaat
    15841 gtcgagcatc tttttgctgt tggagaagct gggcgggtcc atcacaatga ggtcgaaccg
    15901 cctgccttcc ccatatgccg tctgaagata ttgaaacacg tcggcgcgga cgattttgtg
    15961 tcgttccgta tcgatgccgt tcaattcaaa attgcgtttc gcccaatcaa gatatgtgtt
    16021 ggacaaatcg acggtttcgc tggatgccgc gccgccggtg gcggcataga cggtgaagct
    16081 gccggtgtag gaaaacaggt ttaaaaaacg tttgcccgcc gccgtttcgc cgactttttt
    16141 gcgcgtgttt cgatgatcca aaaaaagccc cgtatccaaa tatttatcaa ggttgaccca
    16201 aaacttgcgg ccgttttcgg tgatgacgaa atcgtcgccc gccttgccgg ttttctcgta
    16261 ctgctgcaaa cctttttggc gttcgcggcg tttgaggcgg atttgttcgg gcgcaaaacc
    16321 ggtaacgaaa gcgacggctt ccaagacttc ggcaagccac gcttcgtatt cttcgggccg
    16381 catcagccag ccggtatcgt attcctgaag gtggattcga tcgccgtaaa catcggcggc
    16441 aaaggggaat tgggggatgt cgcggtcgta aatgcgccag gcttcgatgc cgttgcgttt
    16501 cacccatttc ataaggtgtt tgatgttttt gcccaagcgg ttggcaaacg gtgtgatgtc
    16561 ggtcattggt ttcaggcgga ataaagtgga aaacggcaat tttactgtaa ttaacgcccg
    16621 attgcttgac cgtttcgggc aaaccctata ccatccgtcg cttatcttgt catacgaagc
    16681 catcgccttc caacctaaac cgcccttacg ggcgcgtttc ttctgttgct ttgattttgc
    16741 aaagcatatc tgtgcaggtt gccgtcgatg taaaccacaa gcaagccgct tgcgacaacc
    16801 ctgtaacttc acattccccg tatcgttacc cttccctgct tcaggccgtc tgaacctttc
    16861 ggacgcgggc gttgttgtct tccaaggata gccatgtcta ttaaatttgc cgatttgaac
    16921 cttgataaaa acattttgtc cgccgtcagc agcgagggtt acgaaagccc gaccccgatt
    16981 caggcgcaag ccattccgtt tgctttggaa ggccgcgaca tcatggcttc ggcgcaaacc
    17041 ggctccggca aaaccgccgc ctttctgtta ccgactttgc aaaaactgac caaacgcagc
    17101 gaaaaaccgg gcaaaggccc gcgtgctttg gtgttgaccc cgacccgcga actggcggct
    17161 caagtcgaga aaaacgcgct ggcgtatgcc aaaaatatgc gttggttccg caccgtcagc
    17221 atcgtcggcg gcgcgtcttt cggctaccaa acccgtgccc tgagcaaacc ggtcgatctg
    17281 attgtcgcca cgccgggccg tctgatggac ctgatgcaaa gcggcaaagt tgattttgaa
    17341 cgtttggaag tgctgatttt ggacgaagcc gaccgtatgt tggatatggg ctttatcgac
    17401 gacatcgaaa ccatcgtgga agcaacgccg agcgaccgtc agactttgtt gttctccgcc
    17461 acttgggacg gcgcggtcgg caaactggcg cgcaaactga ccaaagaccc tgaaatcatc
    17521 gaagtcgaac gcgtggacga tcaaggcaaa atcgaagaac aactgctgta ctgcgacgat
    17581 atgcgccaca aaaaccgcct gctcgatcat atcttgcgcg atgccaatat cgatcaatgc
    17641 gtgattttca cgtccaccaa agccatgacc gaagtcattg cggatgaact gtacgaaaaa
    17701 ggtttcgccg caaactgcct gcacggcgat atgccgcaag gctggcgcaa ccgcacgctg
    17761 atggatttgc gtaaaggccg ctgcaaaatt ttggttgcca ccgatgttgc cgcacgcggt
    17821 atcgacgtac cgaccattac ccacgttatc aactacgacc tgccgaaaca ggcggaagac
    17881 tacgtccacc gcatcgggcg caccggccgc gcaggccgca cgggtattgc gattacgttt
    17941 gccgaagtga acgaatacgt caaagtccac aaaatcgaaa aatacattaa ccgaaaactg
    18001 cccgaactga ccatcgaagg catggaaccg acccgcaaac gcaaatccgc aggcggcaag
    18061 ccgaaaggca aaggcggctg gggcgatcgt aaatccggcg gttggcgcgg cgatcataaa
    18121 ccgagcaaag aaggcttcgg cggcaaaacg cgcggcgaag gtttcaagaa agaaggcttt
    18181 aagagagacg gtttcaaaaa aaccggcgaa ggcttcaaag gcaaacgcaa agccggcgat
    18241 tcttttgcag gcaaaggcga acgccgttac aaagaccgct aagccccaac ctgccgcata
    18301 aaccaatgcc gtctgaaacc gatttcgagt ttcagacggc atttttgcaa tgtttcagca
    18361 ccgcccggct ttgataccca aaggattaat ct
//
LOCUS       DBBZXU010000032        18302 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.032, whole genome shotgun sequence.
ACCESSION   DBBZXU010000032 DBBZXU010000000
VERSION     DBBZXU010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 18302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18302
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.032"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(31..1557)
                     /locus_tag="ACJJDE_000951"
     CDS             complement(31..1557)
                     /locus_tag="ACJJDE_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HGG7540895.1"
                     /translation="MKTRSLISLLCLLLCSCSSWLPPLEERTESRHFNTSKPVRLDNI
                     LQIRHTPHTNGLSDIYLLNDPHEAFAARAALIESAEHSLDLQYYIWRNDISGRLLFNL
                     VYLAAERGVRVRLLLDDNNTRGLDDLLLALDSHPNIEVRLFNPFVFRKWRALGYLTDF
                     PRLNRRMHNKSFTADNRATILGGRNIGDEYFKVGEDTVFADLDILATGSVVGEVSHDF
                     DRYWASHSAHNATRIIRSGNIGKGLQALGYNDETSRHALLRYRETVEQSPLYQKIQTG
                     RIDWQSVQTRLISDDPAKGLDRDRRKPPIAGRLQDALKQPEKSVYLVSPYFVPTKSGT
                     DALAKLVQDGIDVTVLTNSLQATDVAAVHSGYVKYRKPLLKAGIKLYELQPNHAVPAT
                     KDKGLTGSSVTSLHAKTFIVDGKRIFIGSFNLDPRSARLNTEMGVVIESPKIAEQMER
                     TLADTTPKYAYRVTLDRHNRLQWHDPATRKTYPNEPEAKLWKRIAAKILSLLPIEGLL
                     "
     gene            complement(1669..3075)
                     /locus_tag="ACJJDE_000952"
     CDS             complement(1669..3075)
                     /locus_tag="ACJJDE_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7540896.1"
                     /translation="MEKNTLSARAPSPWLPLLLAIAIFMQMLDATILNTALPEIAADM
                     NESPLDMQLAVVAYTLTVALLIPLSGYLADRFGTKKVFFGSIAVFMLGSALCAASGSL
                     FELTLSRVVQGIGGSMLVPIPRLTILRVYDKSKLLNAINYAVMPALIGPVLGPLAGGY
                     LVEYASWHWIFLLNLPIGLLGFILGRNIMPDIKGSNISLDFKGYLIFSAAACLLLLSA
                     ESLSHALPPYFALLPLCGGLLFARRYFRHMKTASKPIYSADLFLIRTFRLGLAGNLFS
                     RLGISSIPFLMPLMFQVAFGFGASLSGWLVAPVALSSLLVKPLIAPLMKRFGYRTVLL
                     WNTKLLAAFIMLLALPDGNSSLWIWIFLSLAIGACNSLQFSAMNTLTLAGLRPQQTGS
                     GNSLMAVNQQLAISMGIVVGALILKNWTFLIPASSGLHSAFRMTLLSIGGITLASSLV
                     FKRLHVSDGANLTRNTPS"
     gene            3359..4138
                     /locus_tag="ACJJDE_000953"
     CDS             3359..4138
                     /locus_tag="ACJJDE_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HGG7540897.1"
                     /translation="MSATIPPKIIRYDSNPTDVYFFGTCVLDLFMPEAGMDAIALIEQ
                     QGIRVHFPMAQSCCGQPAYSSGHPTEAFDVARAQLDLFPEEWPIVVPSGSCGGMMKHH
                     WPTLFKGSEYEERAVDCAGRIIEFTHFLLAIGFKPEDKGEPLKVAVHTSCAARREMNV
                     HLSGWQLIDGMENVERIVHDHESECCGFGGTFSVKQADISGAMVTDKVAALKETGATE
                     IISADCGCMMNIGGKIAKDEPDMPRPKHIASFLLERTGGKA"
     gene            4135..4836
                     /locus_tag="ACJJDE_000954"
     CDS             4135..4836
                     /locus_tag="ACJJDE_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HGG7540898.1"
                     /translation="MSARENILAKLKKADALPMEEPAVFDYYREKGVSWDSEAERLKH
                     WAAAMRAVKTEIYWVTKSNWMQVFREAAEGKGLKNILLPLATEHGQIARAALAGSNIE
                     PIVFEREIDTWKTEFFTNINAGFSGAQCGIARTGTLMLFSSPEEPRTLSLVPPVHFCL
                     FDTSKMYNEFHNAVEGEKLVENGMPTNVFLISGPSKTADIQLTLAYGAHGPRDLVILA
                     ILPDHISPADLEENA"
     gene            4833..6287
                     /locus_tag="ACJJDE_000955"
     CDS             4833..6287
                     /locus_tag="ACJJDE_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LutB/LldF family L-lactate oxidation iron-sulfur
                     protein"
                     /protein_id="HGG7540899.1"
                     /translation="MTTQTIKFHMKPETFKQNAAISLQDKPLRKSLRTAMDMLMTKRK
                     AVLTDEEELQSLRDLCEHVRQRSLSKLPALLEQLEENLTKLGVKVHWAETPAEACEII
                     HDIITAKNGKLMVKGKSMVSEEIELNHYLEAKGIKAVESDLGEFIVQMAGEKPTHIVM
                     PAIHKTKEQVSELFHQNLGTPLTDDVDQLTGFARKALRDIYSTADVGLSGVNFAVAET
                     GTLCLVENEGNGRLSTTVPPVHIAITGIEKVVAKLSDIPPLYSLLPRSAIGQNITTYF
                     NMITGPRRSEELDGPQEMHLVLLDNGRSQAYAEDQMRRTLQCIRCGACMNHCPVYTRI
                     GGAAYGTTYPGPIGEIISPHLLGLDATRDLPTACTMCGACVEVCPVRIPITEQMQRLR
                     VEAQRSPTETVPHPIRGQGASHTFGEQMAWRTFNGIFSGSKTYRAFGWAATKFRNLTP
                     RKQLGWTQNRVPMKPAKKTLHELMAEKMRQKEQA"
     gene            complement(6470..6955)
                     /gene="purE"
                     /locus_tag="ACJJDE_000956"
     CDS             complement(6470..6955)
                     /gene="purE"
                     /locus_tag="ACJJDE_000956"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HGG7540900.1"
                     /translation="MIQIGIIMGSNSDWPVMRQAAQFLEEFGVEYEARVVSAHRTPDL
                     MFQYAETARERGIKAIIAGAGGAAHLPGMVAAKTTVPVLGVPVPSKYLRGEDSLLSIV
                     QMPKGVPVATFAIGEAGAANAALFAVSMLANETPELAQKLADFRAKQEQAVLSMELEQ
                     I"
     gene            complement(7003..7719)
                     /locus_tag="ACJJDE_000957"
     CDS             complement(7003..7719)
                     /locus_tag="ACJJDE_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system YbgF family protein"
                     /protein_id="HGG7540901.1"
                     /translation="MKTKLPLFIIWLSVSAACSSPVSRNIQDMRPEPQAEAGSSDAIP
                     YPVPTLQDRLDYLEGKIVRLSNEVETLNGKVKALEHAKTHPSGRTYVQKLDDRKLKEH
                     YLNTEGGSASAHTVETAQNLYNQALKHYKSGRFSAAAALLKGADGGDGGSIAQRSMYL
                     LLQSRARMGNCESVIEIGGRYANRFKDSPTAPEAIFKIGECQYRLQQKDIARATWRSL
                     IQAYPGSPAAKRAASAIRKR"
     gene            complement(7719..8387)
                     /locus_tag="ACJJDE_000958"
     CDS             complement(7719..8387)
                     /locus_tag="ACJJDE_000958"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7540902.1"
                     /translation="MTTHLSNVAPDLQNYLNAIGEPEHPVLTRLREKTEHHRMGKMAI
                     AREQAAVLVWLAKLIRAEKYLEVGVFTGYSSTVLALALPKHGRITACDINVTFTDTAR
                     QVWNEAGVAHKISLHLQPALLTLDDLIAQGEAGSYDLALIDADKPPTPQYFERCLKLV
                     RQGGIIAIDNILLNGRVMREAASDAPPSVGILKDFNQNLPNDPRIVPITLPVGDGLTL
                     LLKK"
     gene            complement(8398..8583)
                     /locus_tag="ACJJDE_000959"
     CDS             complement(8398..8583)
                     /locus_tag="ACJJDE_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3460 family protein"
                     /protein_id="HGG7540903.1"
                     /translation="MYHYQSEATQFLNRLIEEKPELEQQRLENRGLLWDVELNPEEQE
                     NFEAAKVAKKPYTYYQD"
     gene            8726..10702
                     /gene="mutL"
                     /locus_tag="ACJJDE_000960"
     CDS             8726..10702
                     /gene="mutL"
                     /locus_tag="ACJJDE_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0032300 - mismatch repair complex
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HGG7540904.1"
                     /translation="MPRIAALPDHLVNQIAAGEVVERPANALKEIVENSIDAGATAID
                     VELAGGGIRLIRVSDNGSGIHPDDIGLALHRHATSKIKTLNDLEHVASMGFRGEGLAS
                     IASVSRLTLTSRQEDSSHATQVKAEDGKLSSPTAAAHPVGTTIEAAELFFNTPARRKF
                     LKSENTEYAHCTTMLERLALAHPHIAFSLKRDGKQVFKLPTQSLPERIAAIVGDDFQT
                     ASLEIDSGNGALRLYGAIAKPTFAKGKTDKQYCFVNHRFVRDKVMLHAVKQAYRDVLH
                     NALTPAFVLFLDLPPEAVDVNVHPTKTEIRFRDSRQVHQLVFHTLNKALADTRADLTE
                     SVSNAGEVLHDITGVTPAPMPSENDSENLFDSASDYPTGNKPDTRNAFGASGKTAPMP
                     YQAARAPQQHSLSLRESRAAMNTYAELYKKTDDIDLELSRLEQARFGNMPSETPAPQT
                     DTPLSDGIPSQSELPPLGFAIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQR
                     QENGKLQSQRLLIPVTFATSHEECAALSDHADALAGFGLELSDMGGNTLAVRAVPAML
                     GKADVVSLAKDVLSELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR
                     DMENTPRSNQCNHGRPTWVKLTLKELDALFLRGQ"
     gene            10797..12917
                     /gene="dnaX"
                     /locus_tag="ACJJDE_000961"
     CDS             10797..12917
                     /gene="dnaX"
                     /locus_tag="ACJJDE_000961"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HGG7540905.1"
                     /translation="MAYQVLARKWRPKTFSDLVGQEHVVKALQNALDEGRLHHAYLLT
                     GTRGVGKTTIARILAKSLNCENAQHGEPCGVCESCTQIDAGRYVDLLEIDAASNTGID
                     NIREVLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPH
                     KVPVTVLSRCLQFVLRNMTAQQVADHLAHVLDSEKIAYAPPALQLLGRAAAGSMRDAL
                     SLLDQAIAMGSGSVAEQDVRQMIGAVDKQYLYELLTGIVNQDGEALLAKAQEMAACAV
                     GFDNALGELAILLQHLALIQAVPNALAHDDPDSDILHRLAQTISGEQIQLYYQIAVHG
                     KRDLSLAPDEYAGFMMTLLRMLAFAPLAATSCDANAVIENTELQSPSAQTAEKETAAK
                     KPQPRPETETAQTSVQTASAAAMPSESKTAEPVSNQENNDVPPWEDAPDEAQTAAGTA
                     QTSAKSIQTASEAETPPENQVSKNKAADNETNAPLSETPSENPIQATPNNEAVETETF
                     AHEAPAEPFYGYGFPDNDCPVEDNAEIPPPDWEHAAPADAEEENNADEGSNDENNTPS
                     APPPEFSTENWAAIVRHFARKLGAAQMPAQHSAWTEYHPDTGLMVLAMTAEARATADK
                     KRLDKIRDTLAQAYGLQLTLQTQDWRDEAGRETPAMQDKRVQAEDRQKAQALLEADPA
                     AQKILQAFGAQWQPESLELAANRP"
     misc_feature    11986..12025
                     /gene="dnaX"
                     /locus_tag="ACJJDE_000961"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01843"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="This ribosomal frameshift element is known only in
                     the genus Neisseria; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01843"
     gene            12997..13332
                     /locus_tag="ACJJDE_000962"
     CDS             12997..13332
                     /locus_tag="ACJJDE_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HGG7540906.1"
                     /translation="MFGKAGLGGLMKQAQQMQENMKKAQAKLAETEIEGEAGNGLVKI
                     TMTCAHEVRKIDISPDLIQEAADDKEMLEDLILAALKSARGKAEETANKTMGAFTQGL
                     PPGVGDFFR"
     gene            complement(14164..15210)
                     /gene="recA"
                     /locus_tag="ACJJDE_000963"
     CDS             complement(14164..15210)
                     /gene="recA"
                     /locus_tag="ACJJDE_000963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HGG7540907.1"
                     /translation="MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGS
                     LGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAVAQCQKNGGVCAFVDAEHAFDPV
                     YARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
                     DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFY
                     SSVRLDIRRTGSIKKGEEVLGNETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELID
                     IGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEVANEIDAKIRALNGVEMHIT
                     EGTQDETDGERPEE"
     gene            15464..16228
                     /gene="aroD"
                     /locus_tag="ACJJDE_000964"
     CDS             15464..16228
                     /gene="aroD"
                     /locus_tag="ACJJDE_000964"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HGG7540908.1"
                     /translation="MCSCLVVKNTVIGSGRTKIAVPLVARDAAELSAVLEQIKNMPFD
                     IAEFRADFLECAGSIGEVLRHTQTVRDALPDKPLLFTFRRHGEGGSFPCSDDYYFELL
                     DALIESRLPDIIDIELFSGETAVRRAVANAQKNGIAALLCNHEFHRTPPQEEIVCRLK
                     QMEDCGADICKIAVMPQSAEDVLTLLSATLEAKRLAAKPIVTMSMGQTGTVSRLAGQV
                     FGSSITFGSGTQNSAPGQIGVSALRAALDCLESGAD"
     gene            16248..18263
                     /gene="rep"
                     /locus_tag="ACJJDE_000965"
     CDS             16248..18263
                     /gene="rep"
                     /locus_tag="ACJJDE_000965"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006268 - DNA unwinding involved in DNA
                     replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HGG7540909.1"
                     /translation="MMKLNPQQLEAVRYLGGPLLVLAGAGSGKTGVITQKIKHLIVNV
                     GYLPHTVAAITFTNKAAAEMQERVAEMLPKSQTRGLTICTFHSLGMKILREEANHIGY
                     KKNFSILDSTDSAKIIGELLGGTGKEAVFKAQHQISLWKNDLKTPEDVVQTASNAWEQ
                     QTARVYASYQETLQSYQAVDFDDLIRLPAVLLQQNSEVRNKWQRRLRYLLVDECQDTN
                     TCQFALMKLLTGAEGMFTAVGDDDQSIYAWRGANMENLRKMQENYPQMKVVKLEQNYR
                     STARILKIANKVIENNPKLFTKKLWSQLGEGEPVKVVACQNEQHEADWVVSQIIKQKL
                     IGGDKTQYADFAVLYRGKHQARIFEEALRGVRIPYRLSGGQSFFDKAEIKDVLSYVRL
                     LANPNDDPAFLRAVTTPKRGIGDVTLGKLNAYAHEHECSLYEAAQTEEALATLNNTNR
                     QHLQAFMDMFGSYRAKAETGEAGEFINSLLEEIDYENHLLASEEGKAGEIKWRNVGDL
                     VSWFARKGGEDGKNIIELAQTVALMTLLEGKDEEETDAVSLSTLHAAKGLEYPYVFLV
                     GCEEGVLPHNDSIEEGNVEEERRLMYVGITRAKRQLTLTHCVKRKKQGIWQFPEPSRF
                     IDEMPQEDLKILGRKGGEPIVSKEEGRRNLADIIGRLDSMKKGGPED"
BASE COUNT         4512 a         5094 c         4943 g         3753 t
ORIGIN      
        1 cgtactggtt tttgttaatc cgctacattt ctataataaa ccttctatgg gcagcaggga
       61 taggattttt gcggcgatgc gtttccaaag tttggcttcg ggttcgttcg ggtaggtttt
      121 tcgggtggcg ggatcgtgcc attgcaggcg gttgtgcctg tcgagggtaa cgcggtaggc
      181 gtatttgggt gtggtatcgg caagggtgcg ctccatctgt tctgcgattt tggggctttc
      241 gataacaacg cccatttcag tattgagccg tgcggaacgg gggtcgaggt tgaatgagcc
      301 gatgaagatg cgtttgccgt ccacaatgaa ggttttggca tgcaggctgg ttacggagct
      361 gccggtcagg cctttgtctt ttgtggcagg gacggcatgg ttgggttgca gctcgtagag
      421 tttgatgccg gctttgagca gcggttttcg gtatttgaca tagccggaat ggacggcggc
      481 aacgtcggtc gcctgtagcg agttggtcag gacggtaacg tctatgccgt cctgcaccag
      541 ttttgccagt gcgtctgtgc cggattttgt ggggacgaaa tagggtgaaa ccagatagac
      601 gcttttttcg ggctgtttga gcgcgtcttg cagccgcccg gcaatcggcg gtttgcggcg
      661 gtcgcggtcg agtccttttg cagggtcgtc gctgatgagg cgggtttgga cgctctgcca
      721 gtcgatgcgt cctgtctgta ttttttggta gaggggcgac tgttcgacgg tttcgcggta
      781 gcgcaggagc gcgtgtctgg acgtttcgtc gttgtatccg agtgcttgaa gacccttgcc
      841 gatgttgccg ctgcggatga tgcgcgtggc gttgtgggcg gaatggcttg cccagtagcg
      901 atcgaagtcg tgcgatactt cgccgacgac gctgccggta gcgaggatat ccaggtcggc
      961 gaaaacggtg tcctcaccga ctttgaagta ttcgtcgccg atattgcgtc cgccgagtat
     1021 ggtggcgcgg ttgtcggcgg taaaggattt gttgtgcatg cggcggttga ggcgggggaa
     1081 atcagtcagg tagccgagtg cgcgccattt gcggaagacg aaggggttga acaggcgcac
     1141 ttcgatattg ggatggctgt cgagggcgag caggaggtcg tccaatccgc gcgtgttgtt
     1201 gtcgtccaac agcaggcgta cgcgcacacc gcgttctgcg gcaaggtaca cgaggttgaa
     1261 cagcagtcgg ccggaaatgt cgttgcgcca gatgtagtat tgcaaatcga ggctgtgttc
     1321 ggcagattcg ataagggcgg cgcgggcggc aaaggcttcg tgggggtcgt tcagcagata
     1381 gatatcggat agcccgttgg tatgaggggt gtgccggatt tgcaggatgt tgtccaggcg
     1441 gacgggtttg gaagtattga aatgacggct ttccgtccgt tcttccagtg ggggcaacca
     1501 tgaagaacat gaacagagaa ggaggcataa aagggaaatt aggctgcgtg ttttcatcag
     1561 ggatatggtt tcagacggca ttgcctgtgt tttggggttg gcgcgcatgg aagtgcggca
     1621 tcataatcca aacgttgaaa cgggtaaaag ttttgcgtgc ggaccgcttt aggacggtgt
     1681 gttccgtgtc aggtttgcgc cgtctgaaac gtgcagacgc ttgaaaacca acgacgaggc
     1741 aagggtgatg ccgccgatgc tgagcagggt catacggaag gcggaatgca gacctgaaga
     1801 agccggtatc agaaatgtcc agtttttaag gattaatgcg ccgacaacaa tgcccatgct
     1861 gatggcaagc tgttggttga ccgccatcag gctgttgccg ctgccggtct gttgcgggcg
     1921 caaaccggcg agggtcagtg tattcatggc agaaaactgc agggagttgc acgcgccgat
     1981 cgccagcgag aggaaaatcc aaatccacag cgacgagttt ccgtcaggca gggcgagcag
     2041 catgatgaag gcggcaagca gcttggtgtt ccaaagcagt accgtgcggt agccgaaacg
     2101 tttcatgagc ggtgcaatca gcggtttgac cagcagcgaa gacagggcga cgggggcgac
     2161 cagccaaccc gacaggcttg cgccgaagcc gaaagcgact tgaaacatca ggggcatcag
     2221 aaaaggaatc gagctgatgc cgagacggct gaacagattg cccgccagtc ccagacggaa
     2281 agtgcgtatc agaaacaggt cggcggaata aatcggtttg gacgcggttt tcatatgtcg
     2341 gaaataacgg cgtgcaaaca gcagtccgcc gcacagcggc aacagtgcaa aatacggagg
     2401 cagcgcgtgc gacaggcttt ctgccgaaag taacaagagg cacgcggcgg cagaaaaaat
     2461 cagataacct ttgaagtcta aagagatatt gctgccttta atatcgggca tgatgttgcg
     2521 tcccaatatg aaacccaaaa gaccgatggg caggttgagc aggaaaatcc agtgccacga
     2581 agcgtattcg accagataac cgcccgccaa aggccctaaa accggtccga ttaatgcggg
     2641 cataaccgca taattgatgg cgttgagcag cttggacttg tcgtacacac gcaagatggt
     2701 cagacgcggt atcggaacca gcatcgaacc gccgatgccc tgaacgacac gggaaagcgt
     2761 caattcaaac agcgaacccg atgcggcgca caatgccgat ccgagcataa aaacggcaat
     2821 cgaaccgaaa aagacttttt tcgttccgaa cctgtccgcc aaataaccgc tcaaaggaat
     2881 cagcagggca accgtcagcg tataggcaac gactgccagt tgcatatcca gaggcgactc
     2941 attcatgtcg gcggcaattt caggcagtgc ggtatttaaa atggtcgcat ccaacatctg
     3001 cataaaaatg gcaattgcca gcagaagcgg cagccaaggg gatggtgcgc gggcggatag
     3061 ggtgtttttt tccatagggc gattgtaccc catccttgtg ccgttattgt tttcagatgc
     3121 tgtctgaatg ccgtcagagt cggcgtcctg aatgttcaca agcaaacgaa tcagcatttt
     3181 attgtaatga taattattat cgaaaattat cagagtaagg tacagtaagc gttatggggt
     3241 agtttgtaag aaaaaccgga ttatttttta aaattagact tgacccgcaa cagtcaatta
     3301 cttaaagtaa acgcttacct ttctacagag aaaaacgggt ttcccgttat caaaaaacat
     3361 gagcgcaacc attcccccaa aaatcatccg atacgacagc aatccgaccg atgtctattt
     3421 tttcggcact tgcgtccttg atctttttat gcccgaagca ggcatggatg ccattgccct
     3481 aatcgagcag cagggcatac gcgtccattt cccgatggcg caaagctgct gcggccagcc
     3541 tgcctattca tccggccatc cgaccgaagc ctttgatgtc gccagagcgc aactcgacct
     3601 tttccccgag gagtggccga ttgtcgtacc gtccggttcg tgcggcggta tgatgaaaca
     3661 ccattggccg acgctgttta aaggcagcga gtacgaggaa agggctgtgg attgcgccgg
     3721 ccgcatcatc gagtttaccc atttcctgct tgccatcggt ttcaaacccg aagacaaggg
     3781 cgaaccgctc aaagtcgccg ttcacacttc ctgcgccgcc cgccgcgaaa tgaatgtcca
     3841 tctttcaggc tggcaactga ttgacggtat ggaaaacgtc gaacgcatcg tccacgacca
     3901 cgaaagcgaa tgttgcggct tcggcggcac attctccgtc aaacaagccg atatttccgg
     3961 cgcgatggta accgacaaag tcgccgcgct gaaagaaacc ggcgcaaccg aaatcatcag
     4021 cgcggactgc ggctgtatga tgaacatcgg cggcaaaatc gccaaggacg agccggatat
     4081 gccgcgtccg aaacatatcg catccttctt gttggaacgc accggaggca aagcatgagc
     4141 gcgcgtgaaa atattttggc aaaactgaaa aaagccgatg ccttgccgat ggaagagcct
     4201 gcggttttcg attattaccg cgaaaagggc gtttcttggg acagcgaagc cgagcgtctg
     4261 aaacattggg ctgccgcaat gcgcgcggtc aaaaccgaaa tttattgggt gacgaaaagc
     4321 aattggatgc aggttttccg cgaagcggca gaaggcaagg gtttgaaaaa catcctgctg
     4381 cccttggcga ccgaacacgg acaaattgcc cgtgccgcat tggcgggcag caatatcgaa
     4441 ccgattgtct tcgagcgcga aatcgatact tggaaaaccg agtttttcac gaacatcaat
     4501 gcgggcttca gcggcgcgca atgcggcatc gcccgcaccg gcacgctgat gctgttttcc
     4561 agccccgaag aaccgcgtac tttgagtctc gttccgcccg tgcatttctg cctgttcgat
     4621 acgtccaaga tgtacaacga gtttcacaat gccgtcgaag gcgaaaaact ggtggaaaac
     4681 ggtatgccga ccaatgtatt cctgatttcc ggcccgtcca aaaccgcaga catccaactg
     4741 acgcttgctt acggcgcgca cggcccgcgc gatttggtca tcctcgccat cctgcccgac
     4801 cacatttccc ctgccgattt ggaggaaaac gcatgactac gcaaaccatc aaatttcaca
     4861 tgaagccgga aactttcaag caaaacgccg caatttccct tcaagacaag cctttgcgta
     4921 aaagcctgcg taccgcgatg gatatgctga tgaccaaacg caaagccgtt ttgaccgacg
     4981 aagaagagct gcaaagcttg cgcgatttgt gcgaacacgt ccgtcagcgc tcattgtcta
     5041 aattgcctgc cctgctggag cagctggaag aaaacctgac taagttgggc gtaaaagtac
     5101 actgggcgga aacaccggcc gaagcctgcg aaatcatcca cgacatcatc acagccaaaa
     5161 acggcaagct gatggtcaaa ggcaaatcga tggtcagcga ggaaatcgag ctgaaccatt
     5221 atcttgaagc aaaaggcatt aaagcggtag aaagcgactt gggcgagttc atcgtccaaa
     5281 tggcaggcga aaaaccgacc catattgtga tgcccgcaat ccataaaacc aaagaacagg
     5341 ttagcgaact gttccaccaa aacctcggta cgccgctgac agacgatgta gaccaactga
     5401 ccggcttcgc ccgtaaagca ctgcgcgata tttacagcac tgccgatgtc ggtttgagtg
     5461 gcgtaaactt tgccgttgct gaaacaggta cgctgtgtct ggtggaaaac gagggcaacg
     5521 gtcgcttgag taccaccgta ccgcccgtgc atatcgctat taccggcatt gaaaaagtgg
     5581 tggcgaaatt gtccgacatc ccacccttgt acagtctgct gccgcgctcc gccatcggtc
     5641 aaaacatcac aacctatttc aatatgatta ccggcccgcg ccgcagtgaa gaattagacg
     5701 gtccgcaaga aatgcacttg gttctgctcg acaacggccg cagccaggct tatgccgaag
     5761 accaaatgcg ccgcaccctg caatgtatcc gttgcggcgc gtgtatgaac cattgcccgg
     5821 tttatacccg catcggcggc gcggcatacg gcacaaccta tcccggtccg attggcgaga
     5881 ttatttcccc gcacctgtta ggcttggatg ccactcgcga cctgccgacc gcctgcacga
     5941 tgtgcggcgc gtgcgtggaa gtttgtccgg tacgcatccc gattaccgaa caaatgcagc
     6001 gtttgcgcgt tgaagcgcaa cgttcgccga ccgaaaccgt gccgcacccc atccgggggc
     6061 aaggcgcatc gcataccttc ggcgaacaaa tggcgtggcg cacattcaac ggtattttca
     6121 gcggcagcaa aacctaccgc gccttcggtt gggcagccac caagttccgc aacctgaccc
     6181 cgcgcaaaca gttgggttgg acgcaaaacc gcgtgccgat gaaaccggcg aagaaaaccc
     6241 tgcacgaact gatggcagaa aaaatgcgcc aaaaagaaca ggcataaaaa gttgttcgca
     6301 aaaatgccgt ctgaaacccg aaacagggct tcagacggca tttgtatagt ggattaacaa
     6361 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggcaag gcgaggtaac
     6421 gccgtactgg tttaaattta agccactata tattcgcgga cggcgggttt taaatctgtt
     6481 ccaattccat actcaaaaca gcctgttcct gtttggctcg gaagtctgcc agtttttgcg
     6541 ccagttcggg ggtttcgttg gcgagcatgg aaacggcgaa caatgcggca tttgccgcgc
     6601 ctgcctcgcc gatggcgaat gtggcgacgg gtacgccttt gggcatttgt acaatcgata
     6661 aaagcgaatc ttcgccgcgc aggtatttgc tggggacggg tacgcccaaa acggggacgg
     6721 tggtcttggc ggcaaccatg ccgggcaggt gcgccgcgcc gcccgcgccc gcgataatgg
     6781 ctttgatgcc gcgctcccgt gcggtttcag cgtattggaa cattaaatcc ggggtgcggt
     6841 gtgcggaaac gacgcgcgcc tcatattcta cgccgaactc ttcaagaaac tgcgctgcct
     6901 gccgcataac gggccaatcg ctgttgctgc ccatgatgat gccgatttga atcataaatc
     6961 ctccttggtg cggatggggt aaaaagcgga aaaatggaaa aactatcgtt tgcgtatggc
     7021 tgaggcggcg cgttttgccg ccgggctgcc cgggtaagcc tgtatcagac tgcgccaagt
     7081 cgcccttgca atgtctttct gctgcaacct gtattggcat tcgccgattt tgaatatggc
     7141 ttcgggcgcg gttgggctgt ctttgaaacg gttggcgtaa cgccctccga tttcgatgac
     7201 ggattcgcag ttccccatac gcgccctgct ttgcagcaac aggtacatac tgcgttgcgc
     7261 gatgctgccg ccgtcgcctc cgtccgcgcc tttcaacagg gcggcagcgg cagaaaacct
     7321 gccgctttta tagtgtttga gcgcctgatt gtagaggttt tgtgcggttt caacggtatg
     7381 tgcggatgcg ctgccgcctt cggtattgag gtaatgctct ttcaacttgc ggtcatcgag
     7441 tttttggacg tatgtcctgc cggaagggtg tgtttttgcg tgttccagtg ctttgacttt
     7501 gccgtttaag gtttccactt cgttcgacag ccggacgatt ttgccttcca gatagtccaa
     7561 acggtcttgc agagtgggaa cgggataggg aatagcgtcc gaactacctg cctctgcctg
     7621 cggttcgggc cgcatatcct gaatattgcg ggaaacaggg gaagaacagg cggcggacac
     7681 agacagccaa atgataaaaa gcggtaattt ggtcttcatt attttttcag aagcagggtc
     7741 aaaccgtcgc cgacgggcag ggtgatgggg acgatgcgcg ggtcgttcgg caggttttga
     7801 ttaaaatctt tgaggatgcc gacgctgggc ggcgcatcgg aagccgcttc gcgcatcacc
     7861 cttccgttca acaaaatatt gtcgatggca atgatgccgc cttgccggac aagcttgagg
     7921 caacgctcga aatattgcgg cgtgggcggt ttgtctgcgt ctatcagtgc caaatcgtag
     7981 cttccggctt caccctgtgc aatcaaatca tccaatgtca gcaatgcggg ttgcagatgc
     8041 aggctgattt tatgtgccac gcctgcctcg ttccaaacct gacgcgccgt atcggtaaag
     8101 gttacattga tgtcgcaggc ggtaatccgc ccgtgttttg gcaacgccaa tgcaagcacg
     8161 gtgctgctgt atccggtaaa tacgccgact tccagatatt tttccgcgcg aatcagcttt
     8221 gccagccaaa ccaaaaccgc cgcctgttcg cgcgcaatcg ccattttgcc catacggtga
     8281 tgctcggtct tctcacgcag ccgcgtcaaa acgggatgtt cgggttcgcc gatggcgttc
     8341 aaatagtttt gcaggtccgg tgcgacattg gacagatggg tcgtcatttc ggtgggttca
     8401 gtcttggtaa taggtataag gttttttcgc tacttttgcc gcctcgaagt tttcctgttc
     8461 ttcgggattg agttcgacat cccacaaaag cccccggttt tccaaacgct gctgttccaa
     8521 ctcaggtttt tcttcaatca gacggttgag gaattgtgtg gcttcggatt ggtagtgata
     8581 catctttgcg ctccaatttt acgggatacg gcgtgattat actggtattt tccaaacggg
     8641 ataaacggct tttatcaaga atacaggcag aaaagtaagg ggttttatta tagaataaag
     8701 cgtttttgca acggaagcct accttatgcc acgcattgcc gccctgcccg accatcttgt
     8761 caaccaaatc gccgccggcg aagtggtcga acgccccgcc aacgccttaa aagaaatcgt
     8821 tgaaaacagc atagacgcag gcgcgacggc gattgatgtc gaactggcgg gcggcggcat
     8881 ccgtctcatc cgcgtcagcg acaacggcag cggtatccat ccagacgaca tcgggcttgc
     8941 gctccaccgc cacgccacca gcaaaatcaa aactctaaac gatttggaac acgttgccag
     9001 catgggcttt cgcggcgaag gtttggccag tatcgcctca gtcagccgcc taaccctgac
     9061 cagccgtcaa gaagacagtt cgcacgcgac ccaagtcaaa gcagaagacg gaaaactcag
     9121 cagccctacg gcagccgccc accccgtcgg caccaccatc gaagccgccg aactcttctt
     9181 caatacccct gcgcggcgca agttcctcaa atccgaaaac accgaatacg cccactgcac
     9241 caccatgctc gaacgccttg cactggcgca tcctcacatt gccttctcac tcaaacgcga
     9301 cggcaaacaa gtattcaaac tcccaaccca aagcttgcct gaacggattg ccgccattgt
     9361 cggcgatgat tttcagacgg cttcattgga aattgacagc ggcaatggcg cattgcggct
     9421 ctatggcgca attgccaagc cgacttttgc caaaggcaaa actgacaaac aatactgctt
     9481 cgtcaaccat cgttttgtcc gcgacaaagt gatgctccac gccgtcaaac aggcataccg
     9541 cgacgtattg cacaacgccc ttacccctgc tttcgtcctc tttctcgacc tgccgcccga
     9601 agccgtggat gtcaacgtcc acccgaccaa aaccgaaatc cgcttccgcg acagccggca
     9661 ggtgcaccaa ctcgtgttcc acacgctcaa caaagccctt gccgacacac gcgccgactt
     9721 gaccgaaagc gtcagcaacg caggcgaagt gttgcatgac attaccggcg ttacgcctgc
     9781 cccaatgccg tctgaaaacg acagcgaaaa tctgtttgat agcgcatccg actacccgac
     9841 aggcaacaaa cccgatacac gcaatgcctt tggtgcatca ggcaaaaccg cgcccatgcc
     9901 ttaccaagcc gcgcgtgcgc cgcaacaaca cagcctgtcc ctgcgcgaaa gccgcgcggc
     9961 catgaatact tacgccgagc tttacaaaaa aactgacgac atcgaccttg agttgagccg
    10021 attagagcag gcacgtttcg gcaatatgcc gtctgaaacg cctgctcccc aaacagatac
    10081 gccgctttca gacggcatcc catcccaatc cgaactaccg ccgctcggtt ttgccattgc
    10141 ccaattacta ggcatctaca ttcttgccca agccgaagac agcctgttgc tcatcgatat
    10201 gcacgccgcc gccgaacgcg tcaactacga aaaaatgaaa cgccaacgtc aggaaaacgg
    10261 caaactacaa agccaacgcc tgcttattcc cgtaaccttc gccacgtccc acgaagaatg
    10321 cgccgccctc tccgaccatg ccgatgcact ggcaggcttc ggcttggaat tgtccgacat
    10381 gggcggcaat acccttgccg tccgcgcagt tcccgccatg ctaggtaaag ccgacgtcgt
    10441 ttcactggcc aaagatgtat tgagcgaact tgcccaagtc ggcagcagcc aaaccatcga
    10501 agaacacgaa aaccgcatcc tcgccactat gtcctgccac ggctcgatcc gcgccggccg
    10561 ccggctcacc ctgcccgaaa tgaacgccct tctgcgcgat atggaaaata cgccgcgcag
    10621 caaccagtgc aaccacggca ggccgacttg ggtcaaactg actttgaaag aattggacgc
    10681 actgttcttg cgcggacagt aagccgaaag tgctagaata cgccgcccga gaccgccgtt
    10741 cagacggcat tccgacgcac cgacagaaac atcacgaccg aaaccaagag aaaaacatgg
    10801 cctatcaagt tctcgcccga aaatggcggc ccaaaacctt ttccgaccta gtcggtcagg
    10861 aacacgtcgt caaagccctg caaaatgcct tggacgaagg caggctgcac cacgcctacc
    10921 tgctgaccgg tacgcgcggc gtgggcaaaa ccaccatcgc ccgcatcctt gccaaaagcc
    10981 tcaactgcga aaacgcgcaa cacggcgaac cttgcggcgt atgcgaaagc tgtacgcaga
    11041 tcgatgccgg acgctatgtc gacctgctcg aaatcgacgc cgcctccaac acaggcatcg
    11101 acaacatccg cgaagtcttg gaaaacgccc aatacgcgcc gaccgccggc aaatacaaag
    11161 tctatatcat cgacgaagtg catatgcttt ccaaaagcgc gttcaacgct atgctcaaaa
    11221 cgctggaaga gccgcccgaa cacgtcaaat tcatccttgc cacgaccgat ccgcacaaag
    11281 tccccgttac cgtattaagc cgctgcctgc aattcgtctt acgcaatatg accgcgcagc
    11341 aggttgccga ccaccttgcc cacgtcctcg acagcgaaaa aatcgcctac gccccccccg
    11401 ccctgcaact tttgggacgc gccgccgccg gatcgatgcg cgatgccttg agcctgctcg
    11461 accaagccat cgccatgggt tcgggcagcg ttgccgaaca agacgtccgc caaatgatcg
    11521 gtgcggtcga taaacaatac ctgtacgaac tgctgacagg catcgtcaac caagacggcg
    11581 aagccctgct ggcaaaagca caggaaatgg ctgcgtgtgc cgtcggcttt gacaacgcct
    11641 tgggcgaact tgccatactg ctgcaacacc tcgccctgat acaggcagtg ccgaatgcct
    11701 tggcgcacga cgaccccgat tccgatattt tgcaccgcct cgcccaaacc ataagcggcg
    11761 aacaaatcca gctttactac caaatcgccg tccacggcaa acgcgacctg agcctcgccc
    11821 ccgacgaata cgccggcttt atgatgaccc tgctgcgtat gctggcgttc gcacccttgg
    11881 cggcaacatc gtgtgatgca aacgccgtga ttgaaaatac cgaacttcaa tccccatcgg
    11941 cacaaaccgc cgaaaaggaa accgccgcaa aaaagcccca accgcgccct gaaacggaaa
    12001 ccgcccaaac atccgttcag acggcatccg cagcggcaat gccgtctgaa agcaaaactg
    12061 ccgaacccgt ttccaatcaa gaaaacaacg atgttccgcc ttgggaagac gcgccggacg
    12121 aagcccaaac cgcagccggc acggcgcaaa cgtcggcaaa aagcattcag acggcatccg
    12181 aagccgaaac gccgcccgaa aaccaagttt ccaagaacaa ggcagccgac aacgaaacca
    12241 atgccccctt gtccgaaacg ccgtctgaaa accccattca ggcaacaccg aataatgaag
    12301 ccgttgaaac ggaaacattt gcacacgaag cccctgcaga acctttctac ggttacggct
    12361 ttccggataa tgactgcccc gtagaagaca acgcagaaat cccgccgccc gattgggaac
    12421 acgccgcccc tgccgatgcg gaagaagaaa acaacgccga cgaaggcagc aacgacgaaa
    12481 acaacacgcc gtccgccccg ccgcccgaat tttccaccga aaactgggca gccatcgtcc
    12541 ggcatttcgc ccgcaaactc ggcgcggcgc aaatgccggc gcaacactcc gcgtggacgg
    12601 aataccatcc cgacaccggc ctgatggttt tggcgatgac cgccgaagcc cgcgccaccg
    12661 ccgacaaaaa acgcctcgac aaaatccgcg acacccttgc ccaagcctac gggctgcaac
    12721 tcaccctgca aacccaagac tggcgcgacg aagccggcag ggaaaccccc gcgatgcagg
    12781 acaagcgcgt ccaagccgaa gacaggcaaa aagcacaagc attgctcgaa gccgaccccg
    12841 ccgcacaaaa aatcctccaa gcattcggcg cgcaatggca gcccgaatca ctggaattgg
    12901 cagcaaaccg gccgtaaaca gatataatgc cgcccgaacc cttcggacgg cattgccgtt
    12961 tccctcattc aatcaaaaca gacaggagta ttcagtatgt tcggaaaagc cggattaggc
    13021 ggcctgatga aacaggcgca gcaaatgcag gaaaatatga aaaaagcgca agccaaactt
    13081 gccgaaaccg aaatcgaagg cgaagcaggc aacggcctgg tcaaaatcac aatgacctgc
    13141 gcgcacgaag tacgcaaaat cgacatcagc cccgatttga ttcaagaagc cgccgacgac
    13201 aaagaaatgc tcgaagacct catcctcgcc gccctcaaat ccgcccgggg caaagccgaa
    13261 gaaaccgcaa acaaaacaat gggcgcattc acgcaaggtc taccccccgg agtgggcgac
    13321 ttcttccgct gatccccgac cgtcattccc acgcaggcgg gaatctagaa cgtagaatct
    13381 gagaaaccgt tttactcgat aaatttccgt gccgaggggt ctggattccc gccttcgcgg
    13441 gaatgacggc atcagtttgc aagattcggc gtgaacggta aaaacagtga gaatgataag
    13501 aacgcaaaaa cggcaagaat agcgggaatc ggcaggctga agcccaccct accattattt
    13561 acacatccgt accgcttaaa tgccgtctga aacttcgtca ttcccgtgaa aacgggaatc
    13621 caaccccgtg ggagcagaaa cttacacccc gtcattcccg cgaacgcggg aatccagtaa
    13681 ccgaaaaacc acaggaatct atcggaaaaa cagaaaccct cgaccgtcat tcccgcgaac
    13741 gcgggaatcc agtaaccgaa aaaccacggg aatctatcgg aaaaaacaga aaccctcgac
    13801 cgtcattccc gcgaacgcgg gaatctagaa cgtagaatct gagaaaccgt tttactcgat
    13861 aaatttccgt gccgacaggt ttggattccc gccttcgcgg gaatgacggc atattttttg
    13921 catttgatat aaaggggcgt ttgaattttg ttcagcaagt gcaaagtgtt gcacataaaa
    13981 aggcgcaggc ttcatccgta aagtcggcgc aggatagagg caaagcgggc gtaggtcggg
    14041 ctgtagcaac tgtatttttc accccgtcgg gcaaaaatac caaaactcaa atcaagccgt
    14101 tcggaggcgg ctcaaaaaaa cggtacttcg cagcagaagt accgtttatc gggatttcag
    14161 gttttattct tcggggcgtt cgccgtcggt ttcgtcctgc gtcccttcgg tgatgtgcat
    14221 ttctacgccg ttgagggcgc ggatttttgc gtcgatttca ttggcgactt cgggattttc
    14281 cttcagccag acgcggacgt tgtctttgcc ctgaccgatt ttcgcgccgt tgtagctgta
    14341 ccacgcgccg gatttgttga tgatgtcgtt tttcacgccg atgtcgatca attcgccttc
    14401 ccaactgatg ccttctccgt agaggatgtc aaactctgcc tgacggaacg ggggggcgac
    14461 tttgtttttg atgactttga cgcgggtttc gttgcccaat acctcttcgc cttttttgat
    14521 ggatccggtg cggcggatgt cgaggcggac ggaagaatag aatttcagcg cgttgccgcc
    14581 ggtggtggtt tcggggctgc cgaacattac gccgatcttc atccggattt ggttgatgaa
    14641 cacaaccagc gtgttggttt ttttgatgtg tccggtcagt ttgcgcaaag cctggctcat
    14701 caggcgcgcc tgcagtccga catggctgtc ccccatatcg ccttcgattt cggctttggg
    14761 gacgagtgcg gctacggaat cgacgactac catatctatg ccgcccgaac ggacgagtgt
    14821 gtcgcagatt tccaaagcct gttcgccggt atcgggctgg gacaggtaaa gctcttcgac
    14881 ttttacgccg agtttgcggg cgtaaacggg atcaaaggcg tgttcggcat cgacaaaggc
    14941 gcacacgccg ccgtttttct ggcattgggc gacggcttcg aggcagaggg tggttttgcc
    15001 ggaggattcg gggccgaaga tttcgacgat gcgcccgcgc ggcagaccgc cgactccgag
    15061 ggcgaggtct aatccgagcg atccggtgga aatgacttcg aggttttctt cctgctggct
    15121 gccgtccatt ttcatgatgg cgcctttgcc gaaacttttt tcgatttgcg ccagtgcggc
    15181 ggcaagggct ttgcttttgt cgtctgacat tggggttact ccggaacaaa tgcggtatgt
    15241 gggatgcggc gcaacacggg ctgcggcgcg ggatgtgtat cgttttcccg atgtgcgggc
    15301 tatcggtaat gctgcttcac ggggttgcca ttatcgcata tttccttgct tgccgatatg
    15361 cggcaggacg cggcggcttg tgccggaatg gaatctggat gccgtctaaa aggcggccgg
    15421 ctttgttata atggcggctg ttttttctgt gtgtgcctgt tttatgtgtt cctgccttgt
    15481 tgtcaaaaat accgttatcg gaagcggacg caccaaaatc gccgtgccgc ttgtcgcccg
    15541 cgatgctgcc gaactttccg ccgtacttga gcaaatcaaa aatatgccct tcgatattgc
    15601 ggagttccgc gccgactttt tggaatgcgc gggcagcatc ggcgaagtat tgcgccacac
    15661 gcagaccgtc cgcgacgcgc tgcccgacaa accgctgctg tttacgttca gacggcatgg
    15721 cgaaggcggc tcgttcccgt gttcggacga ttattatttt gaactgctcg acgcgctgat
    15781 cgaaagccgc ctgcccgaca tcatcgacat cgagctgttt tccggcgaaa ccgccgtccg
    15841 gcgcgccgtg gcaaatgctc aaaaaaacgg catcgccgcc ctactctgca atcatgagtt
    15901 tcaccgcacg ccgccgcaag aagaaatcgt atgccgtctg aaacagatgg aggactgcgg
    15961 cgcggacatc tgcaaaattg cggtgatgcc gcaaagcgcg gaagatgtgc tgactttgct
    16021 ttccgccacg ctcgaagcga aacggcttgc cgccaaaccg attgttacaa tgtcgatggg
    16081 acagacgggg acggtcagcc ggcttgccgg acaggtgttc ggctcaagca tcacgttcgg
    16141 ttcgggaacg caaaactccg cgccggggca aatcggcgta tccgccctcc gtgcggcact
    16201 cgactgtctc gaaagcggcg cagactgatt tcagacggca tcaaaacatg atgaaactca
    16261 atccccaaca gctcgaagcc gtccgttacc tcggcggccc cctgctcgtc cttgccggtg
    16321 caggcagcgg caaaaccggc gtaattactc aaaaaattaa gcatttgatt gtcaatgtcg
    16381 gctatctgcc gcataccgtc gccgcaatta cctttaccaa caaagccgct gcggaaatgc
    16441 aggagcgcgt cgccgaaatg ctgcccaagt cgcaaacgcg cgggctgaca atttgcacgt
    16501 tccattcttt gggcatgaag attttgcgcg aagaggcgaa ccatatcggt tacaaaaaaa
    16561 acttttccat cctcgattcc accgacagcg cgaaaatcat cggcgaactt ttgggcggta
    16621 cgggcaaaga agccgtattc aaggcgcagc accagatttc cttgtggaaa aacgatttaa
    16681 aaacgcctga agatgtcgtt cagacggcct ctaatgcgtg ggaacaacaa accgcacgcg
    16741 tgtatgcgag ctatcaggaa accttacaaa gctatcaggc agtggacttc gatgacttaa
    16801 tccgcctgcc tgccgtgctg ttgcagcaaa acagcgaagt gcgcaacaaa tggcagcggc
    16861 ggctgcgtta tctgctggtt gacgaatgcc aagatacgaa tacctgccaa tttgcgctga
    16921 tgaaactctt gaccggtgcg gaaggtatgt ttaccgccgt cggcgacgac gaccagtcca
    16981 tctacgcgtg gcgcggtgcg aatatggaaa acctgcgcaa aatgcaggaa aactatccgc
    17041 agatgaaggt cgtcaaactg gagcaaaact accgctccac cgcgcggatt cttaaaatcg
    17101 ccaacaaagt catcgaaaac aaccccaagc tgtttaccaa aaaactttgg tcgcaattgg
    17161 gcgaaggcga gccggtcaaa gtcgttgcct gccaaaacga gcaacacgaa gccgactggg
    17221 tcgtcagcca aatcatcaaa caaaaactca tcggcggcga caaaacccaa tacgccgatt
    17281 tcgccgtgtt ataccgcgga aagcatcagg cgaggatttt cgaggaagca ttgcgcggcg
    17341 tgcgcatccc ctaccggctc tccggcggac aaagcttttt cgacaaagcc gaaatcaaag
    17401 acgtgttgtc ttatgtgcgg ctgcttgcca accccaacga cgatcccgcc tttctgcgcg
    17461 ccgtaaccac gcccaaacgc ggcatcggcg atgtaacgct gggcaagctc aacgcctacg
    17521 cgcacgaaca cgaatgcagc ctgtatgaag ccgcgcaaac cgaagaagcc cttgccacgc
    17581 tgaacaatac caaccgccaa cacctgcaag cctttatgga tatgttcggc agctaccgcg
    17641 ccaaagccga aacaggcgaa gcaggcgagt tcatcaacag cctgctcgaa gaaatcgact
    17701 atgaaaacca cctgcttgcc agtgaagaag gcaaagctgg cgaaatcaaa tggcgcaacg
    17761 tcggcgattt ggtatcatgg tttgcgcgaa aaggcgggga agacggcaaa aacatcatcg
    17821 aactcgccca aaccgtcgcc ttgatgacgc ttttggaagg aaaagacgaa gaagaaaccg
    17881 atgccgtctc gctatccacg ctacacgccg ccaaaggttt ggagtatccc tatgttttcc
    17941 ttgtcggttg cgaagaaggt gttttgccgc acaacgacag catcgaagaa ggcaacgtcg
    18001 aagaagaacg ccgcctgatg tacgtcggca tcacccgcgc caaacgccag cttacgctga
    18061 cccactgcgt caaacgcaaa aaacaaggca tatggcagtt ccccgaaccc agccgattca
    18121 tagacgaaat gccgcaggaa gatttgaaaa tcctggggcg caaaggcggc gaaccgattg
    18181 tcagcaaaga agaaggcaga cgcaaccttg ccgatataat cggaaggctc gacagcatga
    18241 aaaaaggcgg tccggaggat taaaccaaga tagggaaacg aagccggaga caatgtatag
    18301 tg
//
LOCUS       DBBZXU010000033        17291 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.033, whole genome shotgun sequence.
ACCESSION   DBBZXU010000033 DBBZXU010000000
VERSION     DBBZXU010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.033"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..107
                     /locus_tag="ACJJDE_000966"
     CDS             <1..107
                     /locus_tag="ACJJDE_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7540910.1"
                     /translation="DCKSFPLFLKECEFRFNFGTPSQQLKILRDWCGI"
     gene            complement(140..1231)
                     /gene="mltB"
                     /locus_tag="ACJJDE_000967"
     CDS             complement(140..1231)
                     /gene="mltB"
                     /locus_tag="ACJJDE_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HGG7540911.1"
                     /translation="MKKRKILPLAICLAALSACTAMEARPPRVNEAQAPRADEMKKES
                     RPAFDTAAVPVSDSGFAANANVRRFVDDEVGKGDFSRAEWQDFFDKAAYKADIVKIMH
                     RPSTSRPWYVFRTGNSGKAKFRGARRFYAENRAVVDDVAQKYGVPAELIVAIIGIETN
                     YGKNTGSFRVADALATLGFDYPRRAGFFQKELVELLKLAKEEGGDVFAFKGSYAGAMG
                     MPQFMPSSYRKWAVDYDGDGHRDIWGNVGDVAASVANYMKQHGWRTGGKMLVSATLAP
                     GADVQAIIGEKTALTRTVADLKAYGIIPGEELADDEKAVLFKLETAPGVFEYYLGLNN
                     FYTVWQYNHSRMYVTAVRDIANSLGGPGL"
     gene            complement(1380..2807)
                     /locus_tag="ACJJDE_000968"
     CDS             complement(1380..2807)
                     /locus_tag="ACJJDE_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HGG7540912.1"
                     /translation="MIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMRYLPEDK
                     WLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQ
                     EFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKY
                     WQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRCETLASEGLRAVRYAVNRIDA
                     EMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFV
                     DYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQK
                     LLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKN
                     QTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFIGKIIARLFVFVQ
                     AEHEDTAAFLLNDIRKDILDCRYCG"
     gene            2992..6675
                     /gene="mfd"
                     /locus_tag="ACJJDE_000969"
     CDS             2992..6675
                     /gene="mfd"
                     /locus_tag="ACJJDE_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HGG7540913.1"
                     /translation="MTYPIPKPREKSRWLNLSQGSLPLALARYLPHRRLKVVLTQDAE
                     QALRLQTAWRFFRPHDTAVFLPDWETLPYERFSPHQDLVSERLSALWQIKSGAADVLF
                     VPVATAMQKLPPVPFLAGRTFWLKTGQTLDIGRLKSDLVDAGYNHVSHVVAAGEFAVR
                     GGIVDLFPMGSEMPYRIDLFDDEIDSIKTFDTETQRTISPVSEIRLLPAHEFPTDNEA
                     QKIFRSRFREEVDGNPNDAAVYKAVSNGHFGAGVEYYLPLFFENELETLFDYIGEDAL
                     FVSLGDVHAEANRFWSDVKSRYAMAQGDETYPPLLPQYLYLSADVFAGRLKNYGQVLP
                     DVSGKEYTLPDLAVNRQADEPLQALKDFQTAFDGRILLCAESLGRRETMLGFLQQNGL
                     KAKPVSDWQGFLSAHEPLMITVAPLAYGFKLGGLQSPSQQQAAPASEGEGDAITDQTE
                     FSASATNPLPSPLPQEREQSTAAISDSLKTKSSLYPIENSLHGQIQQQPAPSPVGEGW
                     GEGKAVAAQSAIAVITESDLYQYVARSRIHNRRKKHAAVSDDLLRDLAEINIGDPVVH
                     EEHGIGRYMGLITMNLGGETNEMMLLEYAGEAQLYVPVSQLHLISRYSGQAHENIALH
                     KLGSGAWNKAKRKAAEKARDTAAELLNLYARRAAQSGHKFEINELDYQAFADGFGYEE
                     TEDQAAAIAAVIKDLTQAKPMDRLVCGDVGFGKTEVALRAAFVAVMGGKQVAVLAPTT
                     LLVEQHAQNFADRFADFPVKVASLSRFNNSKATKAALEGMADGTVDIVIGTHKLVQDD
                     IKFKNLGLVIIDEEHRFGVRQKEQLKRLRANVDILTMTATPIPRTLSMALEGLRDFSL
                     ITTAPSRRLAVKTFVKPFSEGSVREAVLRELKRGGQVFFLHNEVDTIENMRERLETLL
                     PEARIGVAHGQLRERELEQVMRDFLQQRFNVLLCSTIIETGIDIPNANTIIINRADKF
                     GLAQLHQLRGRVGRSHHQAYAYLLTPEYITKDAEKRLDAIAAADELGAGFTLAMQDLE
                     IRGAGEILGEGQSGEMMQVGFTLYTEMLKQAVRDLKKGRQPDLDAPLGITTEIKLHSP
                     ALLPESYCPDIHERLVLYKRLAVCETVQQINAIHEELVDRFGLPEQPVKTLIESHHLR
                     LMAKELGINAIDAAGEAVTVTFGKNNNIDPTEIILLIQNDKKYRLAGADKLRFTAEME
                     NIEVRINTVKNVLKTLQNRCLPK"
     gene            6824..7207
                     /gene="panD"
                     /locus_tag="ACJJDE_000970"
     CDS             6824..7207
                     /gene="panD"
                     /locus_tag="ACJJDE_000970"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004068 - aspartate 1-decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006523 - alanine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HGG7540914.1"
                     /translation="MFRTMLGGKIHRATVTEADLNYVGSITVDQDLLDAAGIYPNEKV
                     AIVNNNNGERFETYTIAGKRGSGVICLNGAAARLVQKGDIVIIMSYVQLSEPEIAAHE
                     PKVVLVDGNNKIRDIISYEPPHTVL"
     gene            7229..8071
                     /gene="kdsA"
                     /locus_tag="ACJJDE_000971"
     CDS             7229..8071
                     /gene="kdsA"
                     /locus_tag="ACJJDE_000971"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008676 - 3-deoxy-8-phosphooctulonate
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HGG7540915.1"
                     /translation="MDIKINDFTLGNNSPFVLFGGINVLESLDSTLQTCAHYVEVTRK
                     LGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVHEPHQCQPV
                     AEVCDVIQLPAFLARQTDLVAAMAETGNVINIKKPQFLSPSQMKNIVEKFHEAGNGKL
                     ILCERGSSFGYDNLVVDMLGFGVMKQTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQA
                     LDLALAGMATRLAGLFLESHPDPKLAKCDGPSALPLHLLEDFLIRIKALDDLIKSQPI
                     LTIE"
     gene            8086..8526
                     /locus_tag="ACJJDE_000972"
     CDS             8086..8526
                     /locus_tag="ACJJDE_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4149 domain-containing protein"
                     /protein_id="HGG7540916.1"
                     /translation="MMQTFRKISLYAATLWLGMQIMAGYIVAPVLFKMLPKMQAGEIA
                     GVLFDILSWSGLAVWGAVLAAAFAALTRRQTALLLFLLSALAANRFLITPVIEALKYG
                     HENWLLSALGGSFGMWHGISSIVFMAAALLSIYLSWRLYGKNAV"
     gene            8571..9857
                     /gene="eno"
                     /locus_tag="ACJJDE_000973"
     CDS             8571..9857
                     /gene="eno"
                     /locus_tag="ACJJDE_000973"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000015 - phosphopyruvate hydratase
                     complex [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004634 - phosphopyruvate hydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HGG7540917.1"
                     /translation="MSAIVDIFAREILDSRGNPTVECDVLLESGVMGRAAVPSGASTG
                     QKEALELRDGDKSRYLGKGVLKAVDHVNNQIAQALIGIDASEQSYIDQIMIELDGTEN
                     KGNLGANATLAVSMAVARAAAEDAGLPLYRYLGGAGPMSLPVPMMNVINGGEHANNSL
                     NIQEFMIMPVGAKSFREALRCGAEIFHALKKLCDSKGFPTTVGDEGGFAPNLNSHKEA
                     LQLMVEATEAAGYKAGEDVLFALDCASSEFYKDGKYHLEAEGRSYTNAEFAEYLEGLV
                     NEFPIISIEDGMDENDWEGWKLLTEKLGGKVQLVGDDLFVTNPKILAEGIEKGVANAL
                     LVKVNQIGTLSETLKAVDLAKRNRYASVMSHRSGETEDSTIADLAVATNCMQIKTGSL
                     SRSDRMAKYNQLLRIEEELAEAADYPSKAAFYQLGK"
     gene            9871..10149
                     /gene="ftsB"
                     /locus_tag="ACJJDE_000974"
     CDS             9871..10149
                     /gene="ftsB"
                     /locus_tag="ACJJDE_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HGG7540918.1"
                     /translation="MKWVTVVLSFALVCCQYSLWFGKGSIGRNSSLREQIAVQEEKNQ
                     TLALRNHSLAAEVYDLENGQEAISEIARVELGYIQDGETFYRLIRHNR"
     gene            complement(10190..10480)
                     /gene="yfaE"
                     /locus_tag="ACJJDE_000975"
     CDS             complement(10190..10480)
                     /gene="yfaE"
                     /locus_tag="ACJJDE_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I ribonucleotide reductase maintenance
                     protein YfaE"
                     /protein_id="HGG7540919.1"
                     /translation="MARIGTNKGFFELLEGETLLEGLERTGHMVEYQCRSGYCGSCRV
                     KILEGSVTYREPPLAFLGRDEILPCCCCVEGDVRLDCGLSGEDEGLSDSLLK"
     gene            complement(10497..10613)
                     /locus_tag="ACJJDE_000976"
                     /pseudo
     CDS             complement(10497..10613)
                     /locus_tag="ACJJDE_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(10715..11848)
                     /gene="nrdB"
                     /locus_tag="ACJJDE_000977"
     CDS             complement(10715..11848)
                     /gene="nrdB"
                     /locus_tag="ACJJDE_000977"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class Ia ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HGG7540920.1"
                     /translation="MSYSTFPKTKNDALNEPMFFGQPVNVARYDQQKYEVFEKLIEKQ
                     LSFFWRPEEIDVSRDRIDYANLPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLVSI
                     PELETWIETWSFSETIHSRSYTHIIRNIVNDPSVVFDDIVENEYITARAEDIACYYDD
                     LIEYTQYYNLLGEGMHNVGGKPITVSLRGLKKKLYLCLMCVNVLEAIRFYVSFACSFA
                     FAERELMEGNAKIIKLIARDEALHLTGTQHMLNLMRSGVDDSEMAEIAAELQDECFQL
                     FKKAAEQEKEWAAYLFKDGSMIGLNKEILSQYVEYITNLRMQAVGLPAGFEGANQNPI
                     PWINAWLSSDNVQVAPQEVEISSYLIGQIDSEVNTDDLGDFEL"
     gene            complement(11909..13096)
                     /locus_tag="ACJJDE_000978"
     CDS             complement(11909..13096)
                     /locus_tag="ACJJDE_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II restriction endonuclease"
                     /protein_id="HGG7540921.1"
                     /translation="MNDLAAQTIQVVNKSDDLVASAIQTANKSIAVYCRYIRPNDVGT
                     TGSHQSGFYIQKHFSDDLFDVVCQKGTNKTISIKINWQDGSVTNSNFKYYGQGTRNEA
                     RITGFGKNFEFLSDKYSGSLLVLCRACYKDLLFHAFVLSSDEDIEIFIAETNILPGSL
                     YLPKKQEVEDNLTKLFSLFPNFPKTEEMAVLARENIALNKTNVSNVLKQWVSKEYELF
                     SIFEKREFEIIKSKITDLDSFINFAHSFTNRRKARAGKSLELHLSRIFDEFSLKFETQ
                     AKTEGKKKPDFLFPGSEEYHAMDESGNFIFQTEKLTMLGSKTTCKDRWRQVLNEADRI
                     PHKHLFTLQEGISDTQIQEMSDENLTLVVPKESVKTFGTFGKTHVLTLENFIKYIKSQ
                     QVS"
     gene            complement(13089..14102)
                     /gene="dcm"
                     /locus_tag="ACJJDE_000979"
     CDS             complement(13089..14102)
                     /gene="dcm"
                     /locus_tag="ACJJDE_000979"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA (cytosine-5-)-methyltransferase"
                     /protein_id="HGG7540922.1"
                     /translation="MKNKIQNQLDNIVTLNNEKFTFIDLFAGIGGFRIAMENVGGRCV
                     FSSEWDDKARQTYQVNFNDIPYGDITLKETKAAIPSKFDVLTAGFPCQPFSIAGVSKK
                     KSLGRETGFLDKAQGTLFFDVAEIIGKHRPKIFLLENVKNLVSHDKGNTFKVIKGTLE
                     ELDYQIFYQVMNAKYYVPQNRERIFIVGFDRQYFNKEINFNFPSPPESQPKLKQILED
                     DVDNSFTLSDNLWLYLQNYAKKHKAKGNGFGFGLVDLDGISRTLSARYYKDGSEILIP
                     QKGKNPRKLTPRECSRLMGFPKDFVIDAVSKTAAYKQFGNSIAVPLVQAIAKQIINEL
                     KNE"
     gene            complement(14160..16439)
                     /gene="nrdA"
                     /locus_tag="ACJJDE_000980"
     CDS             complement(14160..16439)
                     /gene="nrdA"
                     /locus_tag="ACJJDE_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1a ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HGG7540923.1"
                     /translation="MNTPTDLKVTKRDGRLEAIDLDKIHRVVTWAAEGLENVSVSQVE
                     LKSHIQFYNGIRTDDIHETIIKAAADLISEDTPDYQYLAARLAIFHLRKIAYGEYEPP
                     HLYDHVKKLTDAGKYDRHILEDYSREEFDELNAYIDHERDMSFSYAAVKQLEGKYLVQ
                     NRVTSQIYETPQFLYVLVAMCLFSKYPKETRLDYVKRFYDAVSTFKVSLPTPIMSGVR
                     TPTRQFSSCVLIECDDSLDSINATTSAIVKYVSQRAGIGINAGRIRGLDSEIRGGEAR
                     HTGCIPFFKMFQAAVKSCSQGGVRGGAATLFYPLWHIEAESLLVLKNNRGVEDNRIRQ
                     LDYGVQINRLLYTRLIKGGNITLFSPNEVPGLYEAFFADQDEFERLYTKYEQDPNIRK
                     RIIPAADLFSTLMQERAGTGRIYIQNVDHCNTHSPFDPCVAPVHQSNLCMEIALPTKP
                     LDNINDPNGEIALCTLSAFNLGALNSLDELEGLADLTVRALDALLDYQGYPVEAARTS
                     TMGRRSLGIGVINYAYYLAKNGVRYSDGSALGLTHRTFEAIQYYLLKASANLAKEYGA
                     CTLFNQTVYSQGKLPIDTYKKDLDAVCGEPLHYDWESLRADIVKYGLRNSTLTALMPS
                     ETSSQIANATNGIEPPRGLVTVKASKDGILKQVVPEFETLKNAYETLWQLPGNEGYLK
                     LVGVMQKFVDQSISANTAYDPGKFEGGKVSMKQMLKDLLTAYKYGVKTLYYHNTRDGA
                     DDTQTDIQDDGCAGGACKI"
     gene            16968..17279
                     /locus_tag="ACJJDE_000981"
     CDS             16968..17279
                     /locus_tag="ACJJDE_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein"
                     /protein_id="HGG7540924.1"
                     /translation="MLAILLSAILGLVSTTAAAGTSEPAHRHTKHIRKANKQMLHPEC
                     RKYLERRAAWYRSQGNVQELRENKKARKAFRSLPYAEQKIQCRAAYEAFDDFDGGSFR
                     R"
BASE COUNT         4319 a         4568 c         4123 g         4281 t
ORIGIN      
        1 tcgattgcaa atctttccca ctgttcttga aagaatgtga atttcgattt aacttcggca
       61 caccgtctca acagcttaaa atcctgcggg attggtgtgg gatttagggc taatctagta
      121 cagccccttt taaaaaacat tacaatcccg ggccgccaag cgaattggca atgtccctga
      181 ccgccgttac atacatccgg ctgtggttgt actgccatac cgtataaaaa ttgttcaagc
      241 ccaaataata ttcaaacacg cccggtgcgg tttccagttt gaacaaaacc gccttttcat
      301 catcggcaag ctcttcgccg gggatgatgc cgtacgcctt caaatccgcc accgtccgcg
      361 tcagggcggt tttttcgcca atgattgcct gaacatccgc acccggcgcc aatgttgcag
      421 acaccagcat tttaccgccc gtgcgccaac cgtgctgctt catataattg gcaaccgatg
      481 ccgcgacatc gccgacgttg ccccatatgt cccgatgtcc gtccccgtca taatccaccg
      541 cccatttccg gtagctcgaa ggcataaatt gcggcatacc cattgcaccc gcatagctgc
      601 ccttaaaggc gaaaacatcg ccgccctctt cttttgccag ctttaaaagc tcgaccaatt
      661 ctttttggaa aaacccggcg cggcgggggt aatcgaaacc taaagtcgcc aatgcgtccg
      721 ccacgcggaa actgcccgta tttttgccgt aattcgtttc aatcccgata atcgccacga
      781 taagctcggc gggcacgccg tatttttgcg ccacatcatc gacaactgcg cggttttccg
      841 cataaaaccg gcgcgcgccg cgaaatttcg ccttgcccga atttcccgtg cggaacacat
      901 accacggacg cgatgtggag ggtcggtgca taatcttgac gatgtccgcc ttgtaagccg
      961 ctttgtcaaa aaaatcctgc cattccgccc gggaaaaatc ccctttcccg acttcatcgt
     1021 ccacaaaacg gcggacattt gcattggcgg caaacccgct gtcggatacc ggtacggctg
     1081 ccgtgtcaaa cgcggggcgg ctttcttttt tcatttcatc cgcgcggggg gcttgggctt
     1141 catttacccg gggcgggcgt gcctccatcg ccgtacaggc agacaaagcc gccaaacaaa
     1201 ttgccagcgg cagtattttt ctctttttca taaatatgtt ccgaacaaat agggtaagtg
     1261 ggaaagcggc gcaaggggcg cggtgcgaaa tgcggcatcc gccgcaatcg gcggctttgt
     1321 ggaataccgc gcgttgcctt ttgcaccgcc tgaaatccgt atgccgccgt atttgcccgc
     1381 tatccgcaat atcggcagtc caatatatct ttgcggatgt cgttcagcag gaaggctgcg
     1441 gtgtcttcgt gttccgcctg tacgaagaca aagagtcggg cgatgatttt gccgatgaag
     1501 actttttgca gggcgcaggc gtcggtcagg gtgtgttcct gcaggaagct gcggatgtct
     1561 tcgggcaaag tgtagtcgcg ggcgacggcg gcaaagcggg catcggtttg caggcggtcg
     1621 agcagggttt ggtttttgtc caacttcatg cctgcttctt tttcttcggc ggtggcgcgg
     1681 acgaactggt cgtaaatttc ggcataaagc atatcgttcg ggccttcaaa aatcgtgaag
     1741 gggcggatgt cgatagcgat attgccggcg gtgtgtccgc gttcaaaacc cttcgcgccc
     1801 aaaagttttt gcaacatttg cgcggcggcg taagtgtatt ccgtggcgag ggttttgacg
     1861 atgttcgcct ccatcagctg atgggcgacg ggggcaacag gtgaaacgga atggcagacg
     1921 tagcggtaaa gaatctcgga aacctgatgg cggcgccgga tttcgcggcg ttcgtaatcg
     1981 acgaatctga tgtcgttgcg gacgtatcgt tccaggtttt caaggatgta ttccataatg
     2041 ccgtgcgtca tgccgatcag ttgcaggcgg ctgcggataa agatgttttg gaacgcgcgc
     2101 aaaccggcag cgtcgctctg ggagagtttc atcacggcgg ttgcaggcat ttcggcatcg
     2161 atgcggttga cggcgtaacg gacggcgcgc aagccttcgg atgcgagggt ttcgcagcgg
     2221 atgtatgttt tggggacgag cagcaggtcg atgactttgg cgagtttgcc gtttttgcgc
     2281 tctttggcgg caacgaggag gaagtcgctt tgcgagttgc cctgccagta tttcgcggcg
     2341 ttgacgtaaa tggtttgtcc gtcggtatat tcgtagtaag actgcatttc tcgggcaatc
     2401 gccgcgccgg aggtttcggg ttcggtaacg cccaaaccac cgccctcgcc tttgaaaacc
     2461 atgtccaaac cctgtgcgat ttgcgcttca tcgccgaact cttgcagtgg ctgcaacacc
     2521 agcgcgcctt cgatgccggt acgcagcgta acgggcacgc cgtaatgccc cgcaatccgc
     2581 aagacttcct gaatttcaaa ctggctgccc ttgcgcccgc cgtgtttttt gtcgaggaag
     2641 ggcaacagca aacccgcctg cttcaaggca agccatttgt cttcgggcag gtatcgcatc
     2701 aggtcgatac cgtctgaaaa aatgcggcgg aatgcggatt cgatgtgctt taaaaaagca
     2761 gccgtgtcca tagttgacgg ctgcgcactc ggttcggtgt gtatcatcgg cttcctctgt
     2821 cggttcccat taatcggcgg ccggtcaaac cgcctgccac ggtttagagt taattttcta
     2881 aactttacca caaagtgcgc cgggcaacaa tccgccgacc tttcagacgg catcgcgccc
     2941 cctcccgtgc taaaatgacc gtttgcatca ctgtccgccg attgccgcac tatgacctac
     3001 cccatcccca aaccccgtga aaaatcccgt tggctcaatc tgtctcaagg ctcgctaccc
     3061 ttggctttgg cgcgttatct gccgcatagg cggctcaaag tcgtgctgac ccaagatgcg
     3121 gaacaggcgc tacgccttca gacggcgtgg cggtttttcc gtccgcacga tacggcggtg
     3181 ttcctgccgg actgggaaac gctgccttac gagcgttttt cgccgcatca ggatttggtg
     3241 tcggagcgtt tgtcggcgtt gtggcagatt aaaagcggcg cggcggacgt gttgttcgtg
     3301 ccggttgcca cggcgatgca gaagctgccg cccgtgccgt ttctggcggg gcgcacgttt
     3361 tggctgaaaa cgggacagac tttggatata ggccgtctga aaagcgattt ggtggatgca
     3421 ggttataacc atgtttccca cgttgtcgcg gcaggcgagt ttgccgtgcg cggcggcatt
     3481 gtggatttgt tcccgatggg cagcgaaatg ccgtaccgca tcgatttgtt cgacgatgaa
     3541 atcgacagca tcaaaacctt tgacaccgag acgcagcgca ccatctcccc cgtttccgaa
     3601 atccgtctgc tgccggcgca cgagttcccc accgacaacg aggcgcaaaa aatcttccgc
     3661 agccgttttc gcgaggaagt cgatggcaat ccgaacgatg ccgctgtgta caaagccgtc
     3721 agcaacggtc atttcggcgc gggcgtggaa tactacctgc cgctgttttt tgaaaacgag
     3781 ttggaaacgc tgtttgacta tatcggcgaa gatgcgctgt ttgtctcttt aggcgatgtt
     3841 catgccgagg caaaccgttt ttggagcgat gtcaaatcgc gttacgcgat ggcgcagggc
     3901 gacgaaacct atccgccttt gcttccacag tatttgtatc tctctgccga tgtgttcgca
     3961 ggccgtctga aaaactacgg acaggtgctg cccgatgttt ccggcaagga atacaccctg
     4021 cccgaccttg ccgtcaaccg ccaagcagat gagccgttgc aggcattgaa ggattttcag
     4081 acggcgtttg acggacggat tttgctgtgc gccgaaagtt tgggacggcg cgaaactatg
     4141 ctcggtttct tgcagcaaaa cggtttgaaa gccaaacccg tgtccgactg gcagggcttt
     4201 ttatcggcac acgagccgct gatgattact gttgcgccgt tggcatacgg gttcaaactg
     4261 ggcgggctgc aatctccgag ccaacagcaa gctgctcccg cctccgaagg agaaggcgat
     4321 gcgattaccg accaaaccga attttccgca tccgcaacaa accctctccc tagccctctc
     4381 ccacaggaga gggaacaaag taccgccgcc atttcagaca gtctgaaaac caaaagcagc
     4441 ctgtacccca tcgaaaatag tctgcacggg caaatccaac agcaacctgc cccctccccc
     4501 gtgggggagg gttggggaga gggcaaagca gttgccgctc aaagtgccat cgccgtcatc
     4561 accgaatccg atctctacca atacgtcgcc cgttcgcgca tccacaaccg ccgcaagaaa
     4621 cacgccgccg tttcagacga cctgttgcgc gaccttgccg aaatcaacat cggcgacccc
     4681 gtcgtgcacg aggaacacgg catcggccga tatatgggct tgataacaat gaacttgggc
     4741 ggcgaaacca acgaaatgat gttgctcgaa tatgcgggcg aagcgcagct ttatgtgcct
     4801 gtttcgcaac tgcatttaat cagccgctac tccggtcagg cgcatgaaaa cattgccctg
     4861 cacaagctcg gcagtggcgc gtggaacaag gcgaagcgca aagccgccga aaaggcgcgc
     4921 gataccgccg ccgagttgct taacctttac gcccgacgtg ccgcccaatc gggacacaag
     4981 tttgaaatca acgagttgga ttatcaggcg tttgccgacg gcttcggcta cgaagaaacc
     5041 gaagaccagg ccgccgccat cgccgccgtg attaaagatt tgacgcaggc gaagccgatg
     5101 gaccgcctcg tgtgcggcga tgtcggtttc ggcaaaaccg aagtcgccct gcgcgccgca
     5161 tttgtggcgg tgatgggtgg caaacaggtc gccgtactcg ccccgaccac gcttctggtc
     5221 gagcagcacg cgcaaaactt tgccgaccgt ttcgccgatt tccctgtgaa agtcgccagc
     5281 ctttcgcgtt tcaacaacag caaagccact aaagccgcgc tggaaggcat ggcggacggc
     5341 acggtcgaca tcgttatcgg cacgcacaaa ctggtgcagg acgacatcaa attcaaaaac
     5401 ttaggtttag tgattatcga cgaagaacac cgcttcggtg tccgccaaaa agagcagctc
     5461 aaacgcctgc gcgccaatgt ggacatcctc accatgaccg ccacgccgat tccgcgtact
     5521 ttaagtatgg cgttggaagg actgcgcgac ttctcgctga ttaccaccgc gcccagccgc
     5581 cgcctcgccg tcaaaacctt tgtcaaaccc tttagcgaag gcagcgtgcg cgaagccgtg
     5641 ttgcgcgaac tcaaacgcgg aggacaggta tttttcctgc acaatgaagt agatacgatt
     5701 gaaaatatgc gcgagcggct ggaaaccctg ctgcccgaag cccgcatcgg cgtggcgcac
     5761 ggacaactgc gcgagcgcga gctggaacaa gtcatgcgcg actttttgca gcaacgattt
     5821 aacgtgttgc tctgctccac catcatcgaa accggcatcg acatccccaa cgccaacacc
     5881 atcatcatca accgcgccga caaattcggg ctggcgcaac tgcaccagct tcgcgggcgc
     5941 gtcggccgca gccaccatca agcctacgcc tacctgctca cgcccgaata catcaccaaa
     6001 gacgcagaaa aacgcctcga cgccatcgcg gcggcagacg aactcggcgc aggtttcacc
     6061 ctcgccatgc aggatttgga aatccgcggc gcaggcgaaa tcctcggcga agggcagtcc
     6121 ggtgaaatga tgcaggtcgg cttcacgctc tacaccgaaa tgctcaaaca ggccgtgcgc
     6181 gacctcaaaa aaggccgcca acccgacctc gatgcaccgt tgggcattac caccgaaatc
     6241 aaactgcaca gccccgccct gctgcccgaa agctactgcc ccgacatcca cgaacggctc
     6301 gtcctctaca aacgcctcgc cgtctgcgaa accgtacagc aaatcaatgc catacacgaa
     6361 gaactcgtcg accgcttcgg actgcccgag caacccgtca aaacccttat cgaaagccac
     6421 cacttacggc ttatggcaaa agaattgggt atcaatgcca ttgatgcggc cggcgaagcg
     6481 gtaacggtaa cctttggcaa aaacaacaat attgatccaa ccgaaatcat cctgctgatt
     6541 cagaacgaca aaaaataccg ccttgccggc gccgataagc tgcggtttac cgcagagatg
     6601 gaaaatatcg aggtcagaat caacaccgta aaaaacgttt taaaaacctt gcaaaacaga
     6661 tgcctgccca aataaagccg acaccgcaat gctgtctgaa acaccgtttt ccttgtccga
     6721 aagccgccat tatgaatttg aaggaaactc cactataata cggcattcag attttcagac
     6781 ggcatcgcgc ccgtcaaacc gcacacaaac caaaaggaaa tacatgttcc gtactatgct
     6841 tggcggaaaa atccaccgcg ccaccgttac cgaagccgat ttaaactatg tcggcagcat
     6901 taccgtcgat caagacctgt tagacgcggc aggcatctac cccaacgaaa aagtcgccat
     6961 cgtcaacaac aacaacggcg aacgttttga aacctatacc attgcaggga aacgcggcag
     7021 cggcgtgatt tgtctgaacg gtgctgcggc aaggctggtg cagaaaggcg atatcgtcat
     7081 catcatgtct tacgtccaac tctccgaacc cgaaatcgcc gcgcatgaac ccaaagtcgt
     7141 cttggtagac ggaaacaaca aaatccgcga catcatctcc tatgagccgc cgcacaccgt
     7201 gctgtaattc cgcaaacgga catcgattat ggatattaaa atcaacgact tcaccctcgg
     7261 caacaactcg cccttcgtcc tattcggcgg catcaacgtt ttggaaagct tggattccac
     7321 cctccaaacc tgtgcgcatt acgtcgaagt tacccgaaaa ctcggtattc cctatatctt
     7381 taaagcctct ttcgacaagg caaaccgttc ctccatccat tcttatcgcg gcgtaggctt
     7441 ggaagaaggc ttaaagattt ttgaaaaagt caaagcagag ttcggcatcc ccgtcattac
     7501 cgacgtacac gaaccccatc agtgccaacc cgtcgccgaa gtgtgcgatg tcatccagct
     7561 tcccgccttt cttgcgcggc agaccgattt ggtggccgca atggcggaaa cgggcaatgt
     7621 catcaacatc aaaaaacctc agttcctcag cccctctcaa atgaaaaaca ttgtggaaaa
     7681 attccacgaa gccggcaacg ggaaactgat tttatgcgaa cgcggcagca gcttcggcta
     7741 cgacaacctc gttgtcgata tgctcggttt cggcgtgatg aaacagactt gcggcaacct
     7801 gccggttatt ttcgacgtta cccattccct gcaaacccgc gatgctggtt ctgccgcatc
     7861 cggcggtcgt cgcgcacaag ctttggattt ggcacttgca ggcatggcaa cccgccttgc
     7921 cggcctgttc ctcgaatcgc accccgatcc gaaactggca aaatgcgacg gccccagcgc
     7981 gctgccgctg caccttttag aagatttttt aatccgcatc aaagcattgg acgatttaat
     8041 caaatcacaa ccgattttaa caatcgagta acacggtttc gccttatgat gcagactttc
     8101 cgaaaaatca gcctgtatgc cgcaacctta tggctcggta tgcagattat ggcgggttat
     8161 atcgtcgcgc cggtgctgtt caaaatgctg cccaaaatgc aggcgggcga aattgccggc
     8221 gtattgttcg acatcctctc ttggagcggg cttgccgttt ggggcgcggt actggctgcc
     8281 gcctttgccg ccctaacccg gcggcaaacc gccctgctgc tttttttatt gtccgccctt
     8341 gccgccaacc gattcttgat tacacccgtt atcgaggcgc tgaaatacgg gcatgagaat
     8401 tggctgttgt cggctttggg cggatctttc ggaatgtggc acggcatttc cagtattgtt
     8461 tttatggcgg ccgccctact ttcgatttac ttaagttggc ggctctacgg caaaaatgcc
     8521 gtctgaagcc taccgtttta cctcacgtca ctttaatttg gagaatattt atgagcgcaa
     8581 tcgttgatat ttttgcccgc gaaattttgg actcacgcgg caacccaacc gtagaatgcg
     8641 acgtactgtt ggaatccggc gtcatgggac gcgcagccgt accaagcggc gcatcaaccg
     8701 gtcagaaaga agctttagaa cttcgcgacg gcgacaaatc ccgttacttg ggcaaaggcg
     8761 tattgaaagc cgttgaccac gtcaacaacc aaatcgcgca agccctcatc ggtatcgatg
     8821 ccagcgaaca atcttatatc gaccaaatca tgatcgaatt ggacggtact gaaaacaaag
     8881 gtaacttggg tgccaacgcg actttggccg tttctatggc cgtagcacgc gcagccgctg
     8941 aagatgcagg gctgccgctt taccgctact tgggcggcgc aggtccgatg tccctgcccg
     9001 taccgatgat gaacgtcatc aacggcggcg aacacgccaa caacagcctg aacatccaag
     9061 agtttatgat tatgcccgtc ggcgcaaaat ctttccgcga agcgttgcgc tgcggtgcgg
     9121 aaattttcca cgccttgaaa aaactgtgcg acagcaaagg cttcccgacc acagtcggcg
     9181 acgaaggcgg tttcgccccc aacctgaaca gccacaaaga agccctgcaa ctgatggttg
     9241 aagccaccga agccgccggc tacaaagcgg gcgaagacgt attattcgca ttggactgcg
     9301 cgtccagcga gttctacaaa gacggcaaat accacttgga agccgaaggc cgctcctaca
     9361 ccaacgcgga atttgccgaa tatctggaag gcctggtcaa cgagttcccc atcatctcca
     9421 tcgaagacgg gatggatgaa aacgactggg aaggctggaa actgctgacc gaaaaactgg
     9481 gcggcaaagt ccaactcgtt ggcgacgacc tcttcgttac caacccgaaa atccttgccg
     9541 aaggcattga aaaaggcgtg gcaaacgcac tattggtcaa agtcaaccaa atcggtactt
     9601 tgagtgaaac cctgaaagcc gtcgacttag ccaaacgcaa ccgctacgcc agcgtaatga
     9661 gccaccgctc cggcgaaacc gaagacagca ccattgccga cttggcagtc gccaccaact
     9721 gtatgcagat caaaaccggt tctttgagcc gttccgaccg catggcgaaa tacaaccaac
     9781 tgctgcgtat cgaggaagaa ttggcggaag ccgccgacta ccccagcaaa gccgcattct
     9841 accaactggg caaataaaaa aggttaaggt atgaagtggg taactgtcgt tttatccttc
     9901 gcacttgtct gttgccaata cagcctctgg ttcggcaaag gcagcatcgg acgcaacagc
     9961 agtctgagag aacagattgc cgttcaagaa gaaaaaaacc agacactcgc cctacgcaat
    10021 cattcccttg ccgccgaagt ctatgatttg gaaaacggtc aagaagccat ttcggaaatc
    10081 gcccgggtag aactgggtta tatccaagac ggtgaaacct tttaccgact catcaggcat
    10141 aaccggtaat accgtcaaaa agccgtccga accaatgttc ggacggcttt tatttcaaca
    10201 aactgtcaga cagcccctca tcctcccccg acaaaccgca atccagcctg acatccccct
    10261 cgacgcaaca gcagcacggc agtatctcgt cccgccccaa aaaagccaaa ggcggctccc
    10321 gataagtaac gcttccctcc aaaatcttca ctcggcacga tccgcaatat ccgcttcggc
    10381 actgatattc caccatatgc cccgtccgtt ccaagccttc caacagggtc tcgccctcca
    10441 agagctcaaa aaaaccctta ttcgtaccaa tgcgcgccat ttccgaccaa tcaaaaatat
    10501 agtggattaa atttaaacca gtacggcgtt gcctcgcctt gccgtactat ttgtactgtc
    10561 tgcggcttcg tcgccttgtc cggatttttg ttaatccact ataatccact ataaaaggaa
    10621 caataaccga tcctacccgc tgtttttccc atcatacaac atacaaatgc cgtctgaaac
    10681 atccggcttc agacggcatt ttttcaaaaa acatttacaa ctcaaaatcg cccaaatcat
    10741 ccgtattcac ttcagaatcg atctgaccga tcaaataaga ggatatttcc acttcctgcg
    10801 gcgcgacctg tacgttgtcg gacgacagcc acgcattaat ccacggaatc gggttttgat
    10861 ttgcgccttc aaatccggcc ggcaacccca ccgcctgcat acgcagattg gtaatatatt
    10921 cgacgtattg ggataagatt tctttgttca aaccaatcat cgaaccgtct ttaaacaaat
    10981 atgccgccca ttctttttcc tgttccgccg cttttttgaa gagttggaaa cattcgtcct
    11041 gcaactcggc agcaatttct gccatttcag aatcatcaac acccgaacgc atcagattaa
    11101 gcatatgctg cgtgccggtc aggtgcaggg cttcgtcgcg ggcaatcagt ttgatgattt
    11161 tggcgttgcc ttccatcaac tcgcgctcgg caaaagcaaa cgagcaggcg aatgaaacgt
    11221 agaaacggat ggcttccaac acgttgacgc acatcaggca gagatagagt tttttcttca
    11281 acccgcgcaa agacacagta atgggttttc cgccgacatt atgcatccct tcgcccaaca
    11341 ggttgtaata ctgggtgtat tcgattaagt catcgtaata gcaggcaatg tcttcggcgc
    11401 gggcggtaat gtattcgttt tcgacaatat catcaaacac gaccgacgga tcattcacaa
    11461 tattgcggat gatgtgggta tagctgcgcg agtgtatggt ttcgctgaag ctccacgttt
    11521 caatccacgt ttccaactcg ggaatcgaaa ccaaaggcag caaggcaaca ttcggactgc
    11581 gcccttggat ggaatcgagc agtgtttgat atttcagatt gctgatgaaa atatgttttt
    11641 cgtgttcagg caggttggcg tagtcgatac ggtcgcgcga cacgtcgatt tcttccggcc
    11701 gccaaaaaaa cgacaattgt ttttcaatca gtttttcaaa tacctcgtat ttctgctggt
    11761 cataacgggc gacattaacc ggctgaccga aaaacatcgg ctcattcagc gcgtcgtttt
    11821 tggttttggg aaaggtgctg tatgacatag ttaagtgttc gcaggacata atctattctc
    11881 tatattaatt aaaaatgatc tgtaagtttt aactaacctg ctgagacttt atatatttaa
    11941 taaaattttc taaagttaaa acatgggttt tcccaaaagt tccaaatgtt tttacggatt
    12001 ctttagggac aactaaggtt aaattctcat cactcatttc ctgaatttga gtatcagata
    12061 taccttcttg tagagtaaat aaatgcttat gaggaattcg atctgcttca tttaaaactt
    12121 ggcgccagcg atccttacaa gtagtctttg aacctagcat tgtcagcttt tcagtttgaa
    12181 atatgaaatt ccctgattca tccatcgcat ggtactcttc acttccagga aataaaaaat
    12241 ctggtttctt tttcccttct gtcttcgctt gcgtctcaaa ttttaaggaa aattcgtcaa
    12301 atattcttga taaatgtaac tctaaagatt ttcctgctct tgcttttctg cgatttgtaa
    12361 aagaatgtgc aaaattaatg aagctatcca aatcagtaat ttttgattta ataatttcaa
    12421 attcacgttt ttcaaaaatg gaaaataatt catattcctt tgaaacccat tgttttaaca
    12481 cattactaac gttagtttta tttaatgcaa tattttccct tgccaaaact gccatttctt
    12541 cagttttggg gaagttagga aatagtgaaa ataattttgt taggttatcc tctacttctt
    12601 gttttttagg taaatataaa cttcctggta aaatgttagt ttctgcgata aatatttcaa
    12661 tatcttcatc tgaagataaa acaaaagcat ggaataataa atctttataa caagctctgc
    12721 acaataccaa taaggaacca ctatatttat cacttaaaaa ttcaaaattc ttgccaaaac
    12781 ccgtaattct cgcctcattt ctcgtgcctt ggccgtaata tttaaaattg ctattagtga
    12841 cgcttccatc ttgccaatta attttgattg aaatagtttt atttgttccc ttttggcaaa
    12901 ctacatcaaa gaggtcgtct gaaaaatgtt tttgaatata aaatcctgat tggtgactac
    12961 cagtagtacc aacatcattg ggacgaatat aacgacagta tactgcaatt gatttatttg
    13021 ctgtctgtat tgctgaagct actaagtcat cggatttatt tactacttgt attgtctgag
    13081 ctgccaagtc attcattttt taactcattt ataatttgtt tagcaatagc ttgaaccaac
    13141 ggtacagcaa ttgaattgcc aaactgcttg tatgcagctg tcttggatac tgcatcaata
    13201 acaaaatctt taggaaatcc cattaaacgc gagcactccc taggtgtcag cttcctagga
    13261 ttttttcctt tctgagggat gagtatttcg gaaccatctt tgtaatatcg tgcagataga
    13321 gttcgtgata ttccatctaa atcaactaat ccaaaaccaa atccattacc ctttgcctta
    13381 tgttttttag cgtaattttg aaggtaaagc cataagttat cagaaagagt aaaagaatta
    13441 tctacatcat cttccaaaat ttgctttaat tttggttgtg attctggtgg ggaaggaaaa
    13501 ttgaaattta tttccttatt aaaatattgt ctatcaaaac ctacaataaa aatacgctcc
    13561 ctattttgag gaacataata ttttgcattc ataacttgat aaaatatctg atagtcaagc
    13621 tcttctaaag tccctttaat tactttaaat gtatttcctt tgtcatgcga aacaaggttt
    13681 ttcacattct ctaaaagaaa aattttaggt cgatgttttc caataatttc agcaacatca
    13741 aaaaatagag ttccctgcgc cttatctaag aagcctgttt ctcgtcctag gctttttttc
    13801 tttgaaacac cagctataga gaatggctga cacgggaatc ctgctgttaa tacatcaaac
    13861 ttacttggaa tagctgcttt ggtttccttt aatgtaatat ctccataagg aatatcatta
    13921 aaatttactt ggtaggtttg acgggcttta tcatcccatt cactagaaaa tacacatcgc
    13981 ccaccaacat tctccattgc aatgcgaaaa ccacctattc ccgcaaataa atcaataaaa
    14041 gtaaatttct cattatttaa ggtaactata ttatctaatt gattttgtat tttatttttc
    14101 atattttata tttcagatga tttattaatc taaaggccat ctgaaaactc cccctttcat
    14161 caaatcttac aagccccgcc cgcgcagccg tcatcctgaa tatcggtctg cgtatcgtcc
    14221 gcgccgtcgc gggtgttatg gtagtacagg gttttgacgc cgtatttgta ggcggtcagc
    14281 aggtctttga gcatttgttt catagaaact ttgccgcctt cgaatttgcc cgggtcgtag
    14341 gcggtattgg cggaaatcga ttgatcgacg aatttttgca tcacgccgac aagtttcagg
    14401 tagccttcgt tgccgggaag ctgccacagg gtttcatagg catttttcag ggtttcaaac
    14461 tccggcacga cttgtttcaa aatgccgtct ttcgatgctt tgaccgttac caatccgcgc
    14521 ggcggctcga tgccgttggt ggcgttggcg atttgcgaac tggtttcaga cggcatgagc
    14581 gcggtcaggg tggagttacg caggccgtat ttgacgatgt cggcacgcag gctttcccag
    14641 tcgtaatgca aaggctcgcc gcagacggca tccaaatctt ttttgtaagt gtcgatgggc
    14701 agtttgcctt gcgaataaac ggtttggtta aagagcgtgc acgcaccgta ttctttggca
    14761 aggtttgccg atgctttgag caggtaatac tgtatggctt caaaggtacg gtgggtcaga
    14821 ccgagcgcgg agccgtcgct gtagcggaca ccgtttttcg ccagataata agcatagtta
    14881 atcacgccga tgccgagcga acggcgaccc atagtagagg tacgcgcggc ttctaccgga
    14941 tatccctgat aatctaaaag tgcatcgagc gcacgcacgg tcaagtcggc aagcccttcc
    15001 aattcgtcca agctgtttaa tgcgcccaag ttaaaggcag acagtgtaca cagggcgatt
    15061 tcgccgttcg gatcgttgat attgtccagc ggtttggtcg gcagggcgat ttccatacac
    15121 aagttggact gatgaacagg cgcgacgcac ggatcgaacg ggctgtgcgt attgcagtga
    15181 tcgacgtttt gaatgtagat gcgcccggtc ccggcacgct cctgcatcag cgtggaaaac
    15241 aggtcggcag ccggaatgat acgcttgcgt atgttcgggt cttgctcgta tttcgtatag
    15301 agccgctcaa attcgtcttg gtcggcaaaa aacgcttcgt acaaccccgg aacctcgttg
    15361 ggcgaaaaca gcgtaatgtt gccgccctta atcaggcggg tgtacagcag gcggttgatt
    15421 tgcacgccgt aatcaagctg acggatacgg ttgtcttcca caccgcggtt gtttttcaac
    15481 accagcaggc tttcggcttc gatatgccac aaggggtaga acaaagttgc cgctccgccg
    15541 cgcacgccgc cttgcgaaca ggatttgacc gccgcctgaa acattttgaa aaacggaatg
    15601 cagccggtat gccgcgcttc gccgccccgg atttcgctgt ccaaaccgcg gatacgtccg
    15661 gcattgatgc cgatgcccgc acgctgggaa acgtatttca caatcgcgct ggtggtggcg
    15721 ttgatggaat ccaggctgtc gtcgcattcg atcagtacgc agcttgagaa ctggcgcgta
    15781 ggcgtacgca cgccgctcat aatcggggtc ggcagcgata ctttaaatgt ggaaacggca
    15841 tcgtaaaacc gtttgacgta atcgaggcgt gtttctttgg gatatttgct gaaaagacac
    15901 atcgccacca gaacatataa gaactgcggt gtttcataaa tctggctggt aacgcggttc
    15961 tgtaccagat atttgccttc gagctgtttg acagcggcat aggaaaagga catatcgcgt
    16021 tcgtggtcga tataggcgtt cagttcatca aattcttcgc ggctgtaatc ctcaaggata
    16081 tgcctgtcgt attttccggc atcggtgagc tttttaacgt ggtcgtaaag gtgcggcggc
    16141 tcgtattcgc cgtaggctat tttacgcaga tggaaaatcg ccaaacgcgc ggcaaggtat
    16201 tggtagtccg gagtatcttc cgaaattaaa tcggcagcgg ccttgatgat ggtttcgtgg
    16261 atgtcgtcgg tgcggatgcc gttgtagaac tggatgtgcg atttcaactc gacctgcgac
    16321 acggaaacat tttccaatcc ttccgccgcc caagtaacga cacggtgaat cttatccaaa
    16381 tcaatggctt ctaatcttcc gtctcgtttg gttactttca aatcagtcgg tgtattcatc
    16441 gcttcctctt ccactcttga tattcaagac acggtctttt caaacaaatt aagacagaca
    16501 atatagtgga tttttggcat tttctccagt cttgacaacg gttgcatttt tcagtttcag
    16561 gcaatgcgcg ataaaacccg cctgtcgtat ttttcctata atatttgttt tatctgataa
    16621 ttctttaccg ataaaaaacg ggtaaatttt ttgccttttg accggctccg gctacaaggc
    16681 ggtgaaataa ggattttccg acgaaaaagg aaagcttccg gttttctgcc cctgcgaatt
    16741 gttaaatttt gcaaagtatg attttgccgc gccgccgccg acaaattcca ttttcttacc
    16801 gattgaaatt tattattgag attaatgtgt tatttgaatc cgcatatcaa acggcaagtt
    16861 ttgtcggctg aatgagtctg aaactgccga caatttgccc gttccatcct tccatcctat
    16921 actggaagga atgacaaact gaaaggatcg tcatatctgt caaaaagatg cttgccatac
    16981 tgttgtctgc aatattggga ctggtatcga caactgccgc tgccggtacg tcagaacccg
    17041 cccaccgcca taccaaacat atccgcaagg caaacaagca gatgctgcac cccgaatgca
    17101 ggaaatattt ggaacgccgt gccgcgtggt accgatcgca aggcaacgtg caggaattgc
    17161 gcgaaaacaa aaaggcgcgc aaagcattcc gctccctgcc ttatgcggaa cagaaaatcc
    17221 aatgccgggc ggcttatgag gctttcgatg atttcgacgg cggcagtttc cgccgttaat
    17281 cccatataaa a
//
LOCUS       DBBZXU010000034        17145 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.034, whole genome shotgun sequence.
ACCESSION   DBBZXU010000034 DBBZXU010000000
VERSION     DBBZXU010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 17145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17145
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.034"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            689..6172
                     /gene="iga"
                     /locus_tag="ACJJDE_000982"
     CDS             689..6172
                     /gene="iga"
                     /locus_tag="ACJJDE_000982"
                     /EC_number="3.4.21.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgA-specific serine endopeptidase
                     autotransporter"
                     /protein_id="HGG7540925.1"
                     /translation="MKTKRFKINAISLSIFLAYALTPYSEAALVRDDVDYQIFRDFAE
                     NKGKFFVGATDLSVKNKQGQNIGNALSNVPMIDFSVADVNKRIATVVDPQYAVSVKHA
                     KAEVHTFYYGQYNGHNDVADKENEYRVVEQNNYEPHKAWGASNLGRLEDYNMARFNKF
                     VTEVAPIAPTDAGGGLDTYKDKNRFSSFVRVGAGRQLVYEKGAYHQEGNEKGYDLRDL
                     SQAYRYAIAGTPYKDINIDQTMNTEGLIGFGNHNTHYSAEELKQALSQDALTNYGVLG
                     DSGSPLFAFDKQKNQWVFLGTYDYWAGYGKKSWQEWNIYKKEFADKIKQRDNAGTIKG
                     NREHHWNITFGTNSKIGSTAVRLANNERDANNGQNVTFEDNGTLVLDQNINQGAGGLF
                     FKGDYTVKGANNDITWLGAGIDVADGKKVVWQVKNPNGDRLAKIGKGTLEINGTGVNQ
                     GQLKVGDGTVILNQQADADKKVQAFSQVGIVSGRGTLVLNSSNQINPDNLYFGFRGGR
                     LDANGNDLTFEHIRNVDEGARIVNHNTDRASTITLTGKSLITAPQNLSVYEIRNDYDD
                     DDYYGYYSYRKPIPQGKDLYYKNYRYYALKSGGSVNAPMPENGQTENNDWVFMGYKQE
                     EAQKNAMNHKNNQRISGFSGFFGEENGKGHNGALNLNFNGKSAQNRFLLTGGTNLNGK
                     ISVTQGNVLLSGRPTPHARDFVNKSSARKDAHFSKNNEVVFEDDWINRTFKATEIAVN
                     QSASFSSGRNVSNITANITATDNAKVNLGYKNGDEVCVRSDYTGYVTCNTDNLSDKAL
                     NSFGATQINGNVNLSQNAALVLGKAALWGQIQGQGNSSVSLNQHSKWHLTGDSQVHNL
                     SLADSHIHLNNASDAQSANKYHTLKINHLSGNGHFHYLTHLAKNLGDKVLVKESASGH
                     YQLHVQDKTGEPNQEGLNLFDASSVQDRSHLSVSLANNHVDLGALRYTIKTENGITRL
                     YNPYAENRRRVKPAPSPATNTASQAQKATQTDGAQIAKPQNIVVAPPSPQANQAEEAK
                     RQQAKAEQVKRQQAEAERKSAELAKQKAEAEREARELATRQKAEQERSSAELARRHEK
                     EREAAELSAKQKVEAEREAQALAVRRKAEAEEAKRQAAELARRHEKEREAAELSAKQR
                     VGEEERRQTAQSQPQRRKRRAAPQDYMAASQDRPKRRGHRSVQQNNVEIAQAQAELVR
                     RQQEERKAAELLAKQRAEAEREAQALAARRKAEAEEAKRQAAELAHRQEAERKAAELS
                     ANQKAAAEAQALAARQQKALARQQEEARKAAELAVKQKAETERKTAELAKQRAAAEAA
                     KRQQEARQTAELARRQEAERQAAELSAKQKAETDREAAESAKRKAEEEEHRQAAQSQP
                     QRRKRRAAPQDYMAASQNRPKRRGRRSTLPAPPSPSFDSSAYAAPRALHNPDWYENDY
                     EEIPLDALEDENVSESVDTSDKQPQDNTELHEKYENDYEEIPLDALEDEDVSESVDTS
                     DKQPQDNTELHEKVETVSLQPRAAQPRAQAATQPQAQAAAQADAVSTNTNSALSDAMA
                     STQSILLDTGASLTRHIAQKSRADAEKNSVWMSNIGYGRDYASAQYRRFSSKRTQTQI
                     GIDRSLSENMQIGGVLTYSDSQHTFDQASGKNTFVQANLYGKYYLNDAWYVAGDIGAG
                     SLRSRLQTQQKANFNRTSIQTGLTLGNTLKINQFEIVPSAGIRYSRLSSADYKLGNDS
                     VKVSSMSVKTLTAGLDFAYRFKVGNLTVKPLLSAAYFANYGKGGVNVGGNSFAYKADN
                     QQKYSAGAALLYRNVTLNVNGSITKGKQLEKQKSGQIKIQIRF"
     gene            complement(6350..7552)
                     /gene="trpB"
                     /locus_tag="ACJJDE_000983"
     CDS             complement(6350..7552)
                     /gene="trpB"
                     /locus_tag="ACJJDE_000983"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HGG7540926.1"
                     /translation="MKNYHAPDEKGVFGEHGGLYVSETLIPALQELADAYKAAKNDPS
                     FWEEFHRDLKHYVGRPSPVYHAARLSEHLGGAQIWLKREDLNHTGAHKVNNTIGQALL
                     AKRMGKKRVIAETGAGQHGVASATVAARFGMTCDVYMGADDIQRQMPNVFRMKLLGAN
                     VVGVDSGSRTLKDAMNEAMREWVARVDDTFYIIGTAAGPAPYPEMVRDFQCVIGNEAK
                     EQMLEAIGRQPDVAVACVGGGSNAIGLFHPYIGEENVRLVGVEAGGLGVNTPDHAAPI
                     TSGSPIGVLHGFRSYLMQDENGQVLGTHSVSAGLDYPGIGPEHSHLHDIKRVEYTVAK
                     DDEALEAFDLLCRFEGIIPALESSHAVAWAVKNAPKMGKDQVILVNLSGRGDKDINTV
                     AKLKGIKL"
     gene            complement(7737..8426)
                     /locus_tag="ACJJDE_000984"
     CDS             complement(7737..8426)
                     /locus_tag="ACJJDE_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HGG7540927.1"
                     /translation="MLFEGLPCLAVWCKNRLSAVLPVGGLNVSENLLEIETHPFDSVL
                     PPKAAVMMMGTFPPKEDKRAMQFHYPNFQNDMWRVYGLVFFNDAAHFQRLSEKAFDAE
                     KIKAFLRERGIASCPTVLKAAREHGNASDKFLKVVETVDLAAVLAKIPECRHICTTGG
                     KATEILLDIQGGGIKMPKTGETVPFPFAGRDLTLTRLPSTSRAYPLSLAKKAAAYRAF
                     FEMAGLCEKQL"
     gene            8623..9402
                     /gene="rsmA"
                     /locus_tag="ACJJDE_000985"
     CDS             8623..9402
                     /gene="rsmA"
                     /locus_tag="ACJJDE_000985"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HGG7540928.1"
                     /translation="MKEHKARKRFGQNFLQDTRIISDIVNAVRPQADDVVIEIGPGLA
                     AITEPLAKKLNRLHVVEIDRDIVCRLKTLPFADKLVIHEGDVLQFDFNGIAGKKKIVG
                     NLPYNISTPLLFKLAEVADDVVDMHFMLQKEVVERMVAAPKSNDYGRLGVMLQYFFDM
                     EMLIDVPPESFDPAPKVDSAVVRMIPVKHRIGRADDFEYFAKLVKLAFHQRRKTIRNN
                     LKELAGDDDLQAVDINPQDRAEHIAPEKYVALSNYLAGKAV"
     gene            9575..10303
                     /locus_tag="ACJJDE_000986"
     CDS             9575..10303
                     /locus_tag="ACJJDE_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HGG7540929.1"
                     /translation="MIKFKNVHKHFKDLHVINGVNLEIKKGEVVVVCGPSGSGKSTLI
                     RTVNQLESIESGEIWVDGVNVADPKTDLNKIREEVGFVFQSFNLYPHLTVLENITLAP
                     MKVKGQNAEQAEKKAMELLERVGLAHKKDAFPSQLSGGQQQRVAIARGLAMEPRVMLF
                     DEPTSALDPEMVGEVLKVMKDLAESGMTMMCVTHEMGFAREVADRVLFVDKGQILEDE
                     TPEAFFTNPKHERAKQFLQQVMTH"
     gene            10376..10735
                     /locus_tag="ACJJDE_000987"
     CDS             10376..10735
                     /locus_tag="ACJJDE_000987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540930.1"
                     /translation="MYFVDRTAVVLKPTVRFLEWLKSTDENMPDLTIEQLRANCSVFL
                     VPQFDEPEAVVSYFDERYRQIFEAELAGWDIDKDKWPQDMGLKAFWEFFDIEIHDMVL
                     DMEEAELNITPVFDNMM"
     gene            10740..11180
                     /locus_tag="ACJJDE_000988"
     CDS             10740..11180
                     /locus_tag="ACJJDE_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YgfX"
                     /protein_id="HGG7540931.1"
                     /translation="MRAFQTALRPSRILNILTVSLHAASLAVCLTWFYGWMMWFGLAA
                     LVASYAYSLRITNLKHRHAITAITIDRDGQAEIVSGKDKTAATLAGSSMVTPYALFLQ
                     WDTGGTTVSQCIIPDMTDKESYRRLKVWILWRQPKKTAETDTPS"
     gene            11212..12486
                     /gene="folC"
                     /locus_tag="ACJJDE_000989"
     CDS             11212..12486
                     /gene="folC"
                     /locus_tag="ACJJDE_000989"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HGG7540932.1"
                     /translation="MKTLQDWLSHLETAHSGGLIDMGLERVGEVKKRMKLTPQCPVVV
                     VAGTNGKGSVCAYLTQIYKQAGYKTGTLTSPHLLRYNERIAINAEPVSDDTIIASFER
                     IEAARSEISLTYFEFNTLAAVDIFMREQVDVMILEVGLGGRLDAVNAFDGDCAVVTSV
                     DLDHQAFLGDTVEQVGFEKAGVFRSGKPAICGQNPAPKSLLSHAEAIGAKLLMVQRDF
                     EFHALENIQWNYHFRPQHSDSPARNRNSLPFPALRGAYQLSNAACALTVLECLNDKLP
                     VDIGAIKRGLLLVENPGRFQVLPGRPLTVLDVGHNPHAARALRRSLINLAFAQKRTAV
                     FSMLSDKDIDGVLEIVKDQFDEWYIAPLDMPRGMTLESLQNKLHEHSIENIQTFAAVR
                     EAYRAAASKAGENDRIVVFGSFHTVADVMSVL"
     gene            12499..13497
                     /gene="ftsN"
                     /locus_tag="ACJJDE_000990"
     CDS             12499..13497
                     /gene="ftsN"
                     /locus_tag="ACJJDE_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HGG7540933.1"
                     /translation="MSENKQNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSS
                     GPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDLAGEDKPSAADSEISEPENVGAP
                     LVLINERLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAFEKP
                     KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKA
                     DKAESKKTAEKDRSDGKKHETAQKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSL
                     QRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKLRVHGIAGQVTNE"
     gene            13490..13987
                     /locus_tag="ACJJDE_000991"
     CDS             13490..13987
                     /locus_tag="ACJJDE_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009403 - toxin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HGG7540934.1"
                     /translation="MNSLPIADLLVSAVIAACIVISTMRGVITEAGSMAAWVVSFFFA
                     KLFAAPFADIAFASFQPRLFALALSFISLFVIACLIQKILRSLLTGAVSAVGLGFANR
                     ILGGVFGALKGILIITLLVMLASKTDLPDTEEWRQSYTLPFFVSLSEAVLNHSGGTAE
                     TPEDD"
     gene            14023..14154
                     /locus_tag="ACJJDE_000992"
     CDS             14023..14154
                     /locus_tag="ACJJDE_000992"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540935.1"
                     /translation="MPSEMFFPFLSHITDYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            14299..15843
                     /gene="purF"
                     /locus_tag="ACJJDE_000993"
     CDS             14299..15843
                     /gene="purF"
                     /locus_tag="ACJJDE_000993"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009113 - purine nucleobase biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HGG7540936.1"
                     /translation="MCGVLGLVSHEPVNQFLYDGLQMLQHRGQDAAGIATAEGGTFHM
                     HKGKGMVREVFRTRNMRDLTGNAGIAHVRYPTAGNAGSSAEAQPFYVSSPFGIVLAHN
                     GNLTNTAELYENVCNKHLRHVNTSSDSEVLLNVFAHELRREVSKNADPHRLNADNIFN
                     AVAQVHRLVRGAYGVIAMIAGYGMLAFRDPYGIRPLVLGSQTDSEGRKSYAVASESVA
                     FNALTYDLERDIRPGEAVFVGFDGTMIARQCSDRAKLSPCLFEYVYFARPDSVIDGVS
                     VYQSRLDMGVSLAEKIKRELPVDGIDVVMPIPDTSRPSAMELAVHLDKPYREGLIKNR
                     YIGRTFIMPGQATRKKSVRQKLSPMETEFAGKSVLLVDDSIVRGTTSREIVEMVRAAG
                     ARKVYIASAAPEVRYPNVYGIDMPTREELIANGRSAAEIAAEIGADGIVFQDLGDLEA
                     VVKALNPKIESFDSSCFNGIYQTGDIDDAYLDRLSAEKSGCGGLKIHPSRMEHSISIS
                     DAGDEE"
     gene            15943..16434
                     /gene="greB"
                     /locus_tag="ACJJDE_000994"
     CDS             15943..16434
                     /gene="greB"
                     /locus_tag="ACJJDE_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HGG7540937.1"
                     /translation="MSTETKNYITPAGWQALKDELYQLVNKERPEIVQIVNWAAGNGD
                     RSENGDYLYGKRRMREIDRRIRFLTKRLESAVVVDPELREATDQVFFGATVGLLRGDG
                     REQTVKIVGIDEIDTAQNKISWISPLARCLIKAREGDEVVLNTPEGREEIEILSVEYI
                     KID"
     gene            16493..17119
                     /locus_tag="ACJJDE_000995"
     CDS             16493..17119
                     /locus_tag="ACJJDE_000995"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HGG7540938.1"
                     /translation="MRKIRTKICGITTPEDASAAVAAGADAVGLVFFQGSSRAVDIAR
                     AKKITAALPPFVSVVALFVNESAQNIRRILAEVPIHIIQFHGDEDDTFCRQFHRPYIK
                     AIRVQTTSDIRNAADRFPDAQALLFDAYHPSEYGGTGHRFDWTLLAEYSGKPWVLAGG
                     LTPENVGEAVRITGAEAVDVSGGVEASKGKKDPAKVAAFIATTNRLSR"
BASE COUNT         4821 a         4631 c         4174 g         3519 t
ORIGIN      
        1 caagcgggaa tccaaacttg tccgcacgga aacttatcgg ataaaacggt ttctttagat
       61 tccacgttct agattcccgc ttgcgcggga atgacgattc ataagtttcc cgaaattcca
      121 acataaccga aacctgacag taaccgtagc aactgaaccg tcattcccgc cacttttcgt
      181 cattcccacg aaagtgggaa tccagaatct cggactttca gataatcttt gaatattgct
      241 gttgttctaa ggtctggatt cccgcctgcg cgggaatgac gaatccatcc gtacggaaac
      301 ctgcaccgcg tcattcccac gaacccacat cccgttatta ccacgaaagc gggaatctag
      361 gacgcagggt taagaaaacc tacatcccgt cattccctca aaaacagaaa accaaaatca
      421 gaaacctaaa atcccgtcat tcccgcacaa gcgggaatcc aaaaacaaaa agccgcagaa
      481 atttaacgga agaaccgaac cccgaaaatc ggcttcccac cttcgcctga ataacagaac
      541 aaaggaagcg gaaataaaaa catcgggatt ctttttttaa attggcaata aaacaccaaa
      601 atgaatgatt tacacaacaa aaaatagtca acaccaccaa accggcgtaa aatacaaaac
      661 attatcaccc ttaaaacggt aaaaccttat gaaaaccaaa cgttttaaaa ttaacgccat
      721 atccttatcc atctttcttg cctatgccct tacgccatac tcagaagcgg cattggtcag
      781 agacgatgtc gattatcaaa tattccgtga ctttgcagaa aacaaaggca aattttttgt
      841 cggcgcaacc gatttatcag tgaaaaacaa acaaggtcaa aacatcggca acgcattatc
      901 caacgtaccg atgattgatt ttagcgttgc agatgtcaac aaacgcatag caacggtagt
      961 cgatccccaa tatgctgtca gcgtcaaaca cgccaaagca gaagtccata ctttttatta
     1021 cggtcaatac aacggtcata atgatgtagc cgacaaagaa aatgaatacc gcgttgtcga
     1081 acaaaataac tatgaacccc ataaagcttg gggtgcgagc aacttaggtc gcctcgaaga
     1141 ttataatatg gcgcgtttta acaagtttgt aactgaagtt gcgccgattg caccaactga
     1201 tgccggcggc ggattggata cctacaaaga taaaaaccgt ttttcctctt ttgtcagagt
     1261 tggcgcaggc aggcaattag tttatgaaaa aggggcttat catcaagaag gaaatgaaaa
     1321 aggctacgat ttgcgcgatc tttcacaagc ctatcgttat gccattgcag gtacacctta
     1381 taaagatatt aatattgacc aaacaatgaa taccgaaggt ttgattggct ttggtaatca
     1441 caatacacac tattcagcag aagaacttaa acaagcactc tcgcaagatg cgttaacaaa
     1501 ttacggcgtg ttgggcgata gcggctctcc gttatttgct tttgacaaac aaaaaaatca
     1561 atgggtcttt ttgggaactt atgattattg ggcaggttac ggaaaaaaat cttggcaaga
     1621 atggaatatc tataaaaaag aatttgcaga taaaatcaaa caacgcgata acgccggcac
     1681 catcaaaggt aatagagaac atcattggaa cattactttt ggcacaaaca gcaagattgg
     1741 ttctacagcg gtaaggcttg ccaacaatga aagggatgca aacaacggac agaatgttac
     1801 ctttgaagac aacggcactt tggtattgga tcaaaacatc aaccaaggcg cgggcggtct
     1861 gtttttcaaa ggcgattaca cagtcaaagg tgcaaataat gacatcactt ggctaggtgc
     1921 ggggattgat gttgccgacg gcaaaaaagt cgtttggcaa gtcaaaaatc cgaatggcga
     1981 cagattggca aaaatcggca aaggcacatt agaaataaac ggcacaggcg ttaaccaagg
     2041 gcaattaaaa gtcggcgacg gtacggttat tctgaatcaa caagccgatg ccgacaaaaa
     2101 agtccaggct ttctcccaag tcggcattgt cagcggacgc ggtacattgg tattaaatag
     2161 ttcaaatcag attaatcccg ataacttata tttcggtttc cgtggcggtc gtttggatgc
     2221 caatggcaat gacttgactt ttgaacacat ccgcaacgtg gatgaaggcg cgcgcattgt
     2281 caaccacaac acagaccgcg cctccacaat cacattaacc ggcaaatcat taattaccgc
     2341 tcctcaaaat ctttctgttt atgaaatccg aaatgattac gatgatgacg attattatgg
     2401 ctattacagc tatagaaaac ccattccgca aggcaaagat ctttattaca aaaactatcg
     2461 ttattacgcc ctaaaatccg gcggcagcgt gaacgcaccg atgcccgaaa acggacaaac
     2521 ggaaaataac gactgggtct ttatgggata taagcaagaa gaagcccaga aaaacgcgat
     2581 gaaccacaaa aacaatcagc gtattagcgg ttttagcggt ttctttggcg aagaaaacgg
     2641 aaaaggacat aacggcgcat taaaccttaa tttcaacggc aaaagcgcgc aaaaccgttt
     2701 cttgttaaca ggcggcacga atttaaacgg aaaaataagc gtaactcaag gcaatgtctt
     2761 gttatcaggt cgtccaacac cacacgcaag agattttgtg aacaaatctt cagcccgaaa
     2821 agacgcacat ttctccaaaa acaatgaagt cgtatttgaa gacgactgga taaaccgcac
     2881 attcaaagcc acagaaattg cggttaatca atccgcatca ttctcttccg gcagaaatgt
     2941 atccaacatt accgccaaca tcaccgcaac agacaacgcc aaagtaaatt tgggttacaa
     3001 aaacggcgat gaagtttgcg tgcgctcgga ctataccggt tacgttacct gcaacacaga
     3061 caacttatcc gataaggctt taaacagctt tggagcgaca cagattaacg gcaatgtgaa
     3121 tttgagtcag aatgcggcat tggtcttagg caaggctgca ttatgggggc aaattcaagg
     3181 gcaaggaaac agcagcgtca gcctaaacca acatagcaaa tggcatttga ccggcgacag
     3241 ccaagtacac aatctgtcat tggcggatag ccatattcat ttgaacaacg cttccgacgc
     3301 gcaaagtgca aataaatacc acacgctcaa aatcaatcat ttatccggta acgggcattt
     3361 tcattatctg acgcacctgg cgaaaaatct tggggataag gtgcttgtga aggaatccgc
     3421 atccggtcat tatcagctcc atgttcaaga taaaacaggc gaacccaatc aggaagggct
     3481 gaatctcttt gatgcatcat ccgtacaaga ccgttcgcac ctttctgttt ccttggcgaa
     3541 taaccatgta gatttaggcg cattgcgtta tacaatcaaa acagaaaacg gtattacccg
     3601 attgtacaat ccttatgccg agaaccgccg ccgagtcaaa ccggccccgt ctcctgccac
     3661 aaacacggct tctcaagcac aaaaggcaac acaaacggac ggtgcacaaa ttgccaagcc
     3721 tcaaaatatc gtcgtcgcac cacctagccc gcaggcaaat caagccgaag aagcaaaacg
     3781 ccaacaagca aaagcggagc aagtgaagcg tcagcaagca gaagcagagc gtaaatcggc
     3841 agagttagca aaacaaaaag cagaagccga acgcgaagca agagagctgg cgacccgcca
     3901 aaaagcagaa caagaacgca gcagcgccga acttgcacgt cgacatgaaa aagaacgcga
     3961 agcggcagag ttgtcggcaa aacaaaaagt cgaagccgaa cgtgaggctc aagcattggc
     4021 ggtacgccga aaagccgaag ccgaagaggc aaaacgccaa gctgcagagc ttgcacgccg
     4081 gcatgaaaaa gaacgcgaag cggcagagtt gtcggcaaaa caaagggtcg gggaagagga
     4141 acgccgtcaa acagcccaat cccagccgca acgccgcaaa cgccgtgccg caccgcagga
     4201 ttatatggca gcttcccaag accgtcctaa acgccgcgga caccgttcgg tacagcaaaa
     4261 caatgtggaa attgcccaag cccaagcaga acttgtgcgc cgacagcagg aagaacgcaa
     4321 agcggcagag ttgttggcaa aacaaagggc agaagccgaa cgtgaggctc aagcattggc
     4381 tgcgcgccga aaagcagaag ccgaagaggc aaaacgccaa gctgccgaac ttgcacatcg
     4441 ccaggaagca gaacgcaaag cggcagaatt gtcggcaaac caaaaagccg cagctgaagc
     4501 ccaagcattg gcggcacgcc aacaaaaagc ccttgcgcgt caacaggaag aagcacgaaa
     4561 agctgcagag ttagccgtca aacaaaaagc ggaaaccgaa cgcaaaaccg ccgaacttgc
     4621 caagcaaagg gcagcagccg aagcagcaaa acgccagcaa gaagctcgcc agaccgccga
     4681 acttgcacgt cgtcaagaag cggaacgcca agcagcagag ttgtcggcaa aacaaaaagc
     4741 cgaaacagat cgagaagcgg cagaatcggc gaaacgaaaa gctgaggaag aagagcaccg
     4801 tcaagcagcc caatcccagc cgcaacgccg aaaacgccgt gccgcacctc aggattatat
     4861 ggcagcttcc caaaatcgtc cgaaacgtcg cggacgcaga tctactctgc cggcaccgcc
     4921 ctcgccatca tttgattcgt cagcttacgc agcacccagg gccttgcata atccggactg
     4981 gtatgaaaat gactatgaag aaatcccctt ggatgcgttg gaagatgaaa atgtatctga
     5041 atcagttgac acatcagaca aacagcctca agacaatacg gaacttcatg aaaaatatga
     5101 aaatgattat gaagaaatcc ccttggatgc gttggaagat gaagatgtat ccgaatcggt
     5161 tgacacatca gacaaacagc ctcaagacaa tacggaactt catgaaaaag ttgagacagt
     5221 gagtttgcaa ccaagagccg cgcagccgcg agcccaagcc gccactcagc cgcaagccca
     5281 agccgccgcg caagccgatg cagtcagcac caataccaac tcggctttat ctgacgcaat
     5341 ggcaagcacg caatctatct tgttggatac aggtgcttca ttaacacggc acattgcaca
     5401 aaaatcacgc gctgatgccg aaaaaaacag cgtttggatg tcgaacatcg gttatggccg
     5461 tgattatgct tccgcacaat atcgccggtt tagttcgaaa cgcacgcaaa cacaaatcgg
     5521 cattgaccgc agcttgtccg aaaatatgca gataggcggc gtattgactt actctgacag
     5581 tcagcatact tttgatcagg cgagcggcaa aaatactttt gtgcaagcca acctttatgg
     5641 taagtattat ttaaatgatg cttggtatgt ggccggcgat attggtgcag gcagcttgag
     5701 aagccggtta caaacacagc aaaaagcaaa ctttaaccga acaagtatcc aaaccggcct
     5761 tactttgggc aatacgctga aaatcaatca attcgagatt gtccccagtg cgggaatccg
     5821 ttacagccgc ctgtcatctg cagattacaa gttgggtaac gacagtgtta aagtaagttc
     5881 tatgtcagtg aaaacactga cggccggact ggattttgct tatcggttta aagtcggcaa
     5941 ccttaccgta aaacccttgt tatctgcagc ttactttgcc aattatggca aaggcggcgt
     6001 gaatgtgggc ggtaattcct tcgcctataa agcagataat caacagaaat attcagcagg
     6061 tgccgcgtta ctgtaccgta atgttacatt aaacgtaaat ggcagtatta caaaaggcaa
     6121 acaattggaa aaacaaaaat ccggacaaat taaaatacag attcgtttct aaaatactaa
     6181 attcatagca aaataaaatg ccgtctgaac tcaggcttca gacggcattt ttatagtgga
     6241 ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt acagatagac ggcaaggcga
     6301 ggcaacgccg tactggtttt tgttaatcca ctatatcaga cggacgaggt tacagtttaa
     6361 tccctttgag cttcgcgacg gtattgatgt ctttgtcgcc acgacctgag aggttgacca
     6421 gaatcacttg gtctttaccc attttcggcg catttttcac cgcccaagca acggcgtggc
     6481 tggattcgag cgcggggatg atgccctcga agcggcagag caagtcaaag gcttcgagtg
     6541 cttcgtcgtc tttggcaacg gtgtattcga cgcgcttgat gtcgtgcaga tggctgtgtt
     6601 ccgggccgat gccggggtaa tccaagcctg cggaaacaga gtgtgtaccc aagacttgac
     6661 cgttttcgtc ctgcatcaga tagctgcgga aaccgtgcaa tacgccaatc ggtgagcccg
     6721 aagtaatcgg cgcggcgtga tcgggggtgt tcacgcccaa accgccagcc tccacgccga
     6781 cgaggcgcac gttttcttcg ccgatatacg ggtggaacaa accaatggcg ttcgatccgc
     6841 cgcccacgca ggcaacggca acgtcgggct gtctgccgat ggcttccaac atttgttctt
     6901 tggcttcatt gccgatcacg cattgaaagt cgcgcaccat ttcgggatac ggcgcgggac
     6961 cggcggcggt accgatgatg tagaatgtgt catccacgcg ggcgacccat tcgcgcatgg
     7021 cttcgttcat cgcgtctttc aaagtacggc tgccgctgtc aacgccgacg acattcgcgc
     7081 ccaataattt catacggaac acgttgggca tttggcgttg gatgtcgtcc gcacccatgt
     7141 acacgtcgca agtcatgccg aagcgggcgg caacagtggc actcgccacg ccgtgctgac
     7201 ccgcgccggt ttcggcgatg acgcgttttt tacccatacg ttttgccaac agtgcctgac
     7261 cgatggtgtt gttgactttg tgcgcgccgg tgtggttcaa gtcttcgcgc ttcaaccaaa
     7321 tttgcgcgcc acccaaatgc tcggacaatc gcgcggcatg gtaaacgggg ctgggcctgc
     7381 cgacgtagtg tttcaaatcg cggtggaatt cttcccaaaa cgacgggtcg tttttcgctg
     7441 ccttataggc atccgccagc tcttgcaagg cgggaatcag ggtctcggaa acataaagcc
     7501 caccgtgttc gccgaaaacg cccttctcgt cgggtgcgtg gtaattcttc atcagatttc
     7561 gtccttgtgc ttcaaatttt cagacggcaa tttatagtgg attaacaaaa accggtacgg
     7621 cgttgccccg ccttgccgta ctatttgtac tgtctgcggc ttcgccgcct tgtcctgatt
     7681 tttgttaatc cactatattt ttcaaacatg ccgtccgaac gggaaattgt cggcaattat
     7741 aactgctttt cacacaagcc cgccatttca aaaaacgccc gatacgccgc cgcttttttc
     7801 gccaaactca aaggataggc acgcgaagtc gaaggcaggc gcgtcagcgt caaatcccgt
     7861 ccggcaaacg gaaacggcac ggtttcgccc gttttcggca ttttgatgcc gccaccctga
     7921 atatcgagca ggatttccgt cgccttgccg cctgtcgtac aaatatggcg gcactcgggt
     7981 atttttgcca acaccgccgc caaatcgacg gtttcaacta cctttaaaaa cttgtcggac
     8041 gcattgccgt gttcccttgc cgccttcaac acggtcggac aggacgcaat tccccgttcg
     8101 cgcaaaaacg ccttgatttt ctcggcatca aacgcttttt cagacaacct ttggaaatgc
     8161 gccgcatcat taaaaaacac cagcccgtaa acgcgccaca tatcgttttg gaaattcgga
     8221 taatgaaact gcatcgcgcg tttgtcttcc ttgggcggaa acgtccccat catcatgacc
     8281 gcagccttcg gcggcaacac ggaatcgaag ggatgggttt cgatttcaag cagattttca
     8341 gacacgttca atcctccaac aggcaaaacg gcagacagcc ggtttttgca ccaaaccgcc
     8401 aaacacggca agccttcaaa cagcattatc acgccctgcc gttttcggtt acaatgccga
     8461 catcaaacgg atactgtaaa cacatttatg ttccaacaca caggacgaca cttaaagcac
     8521 cgccctatgt gccatcctga tttggaaggg gttacgcccc tcccaaatag agtctgattc
     8581 taccgcccta aagggcgggg tttcaaccga aaaggaaaca cgatgaaaga acacaaagcc
     8641 cgcaagcgtt tcgggcagaa ttttttgcag gacacgcgga ttatcagcga tattgtcaac
     8701 gccgtgcgcc cgcaggcgga tgatgtcgtg attgaaatcg gtccgggttt ggcggcgatt
     8761 accgaacctt tggcgaaaaa gctgaaccgc ctgcacgttg tcgaaatcga ccgcgacatc
     8821 gtatgccgtc tgaaaacgct gccgtttgcg gacaagctcg tcattcatga aggcgacgtg
     8881 ttgcagtttg atttcaacgg catcgcaggc aaaaagaaaa tcgtcggcaa cctgccgtac
     8941 aacatttcca cgccgctttt gttcaagctg gcggaggtgg cggacgatgt cgtcgatatg
     9001 cactttatgc tgcaaaaaga agtggtcgag cgtatggttg ccgcgccgaa aagcaacgac
     9061 tacggccgct tgggcgtgat gttgcaatat ttcttcgata tggaaatgct gattgacgtg
     9121 ccgcccgaat cgttcgaccc cgcgccgaaa gtcgattccg ccgtcgtccg catgattccg
     9181 gtgaaacacc gcatcggcag ggcggacgat ttcgagtatt tcgccaaact cgtgaaactc
     9241 gccttccacc aacgccgcaa aaccatacgc aacaatctga aagagcttgc aggcgacgat
     9301 gatttgcagg cagtcgacat caatccgcaa gaccgtgccg aacatatcgc gccggagaaa
     9361 tatgtggcgt tgagcaatta tctagcgggc aaggccgtct gaaaagggag taagccgatg
     9421 acgaaatacc tgcttttacc cctgatactg ccgcttgcag cctgcctgac caatccgaac
     9481 gaccgttttt ttgacggcag acgctacacg cttcatcata tggagctccc gtaacgacaa
     9541 cctgcaacgg caaatgccgt ctgaaagaaa agacatgatc aaattcaaaa acgtacacaa
     9601 acatttcaaa gacctgcacg tcatcaacgg cgtgaacttg gaaatcaaaa aaggcgaagt
     9661 ggtcgtcgtc tgcggacctt cgggcagcgg caaatccaca ctcatccgca ccgtcaacca
     9721 gcttgaaagc atcgaaagcg gcgagatttg ggtggacggt gtcaacgttg ccgacccaaa
     9781 aaccgatttg aacaaaatcc gcgaagaagt cggctttgtg tttcaaagtt tcaacctcta
     9841 cccgcacctg accgtgttgg aaaacattac cctcgcaccg atgaaggtta aaggtcaaaa
     9901 tgcggaacag gcagagaaaa aagcgatgga acttttggaa cgcgtcggac tggcacacaa
     9961 aaaagacgcc ttcccttccc aactttccgg cggccagcag caacgcgtgg cgattgcacg
    10021 cggtttggcg atggaaccgc gcgtaatgtt gtttgacgaa ccgacctccg cactcgaccc
    10081 cgaaatggtc ggcgaagtgt tgaaagtgat gaaagacttg gcggaaagcg gtatgacgat
    10141 gatgtgcgta acccacgaaa tgggttttgc ccgcgaagtt gccgaccgag tgctttttgt
    10201 cgataaaggg caaatcctcg aagacgaaac gcccgaagcg ttttttacca acccgaaaca
    10261 cgaacgcgcc aaacaattcc tgcaacaggt catgacccac tgatgctatg ccgtctgaaa
    10321 accgaacgtt cagacggcat agcccgacac cgcaagatga ttgagaaaga aaaccatgta
    10381 ttttgttgac cgcaccgccg tcgtcctcaa gccgaccgtc cgctttttgg aatggctcaa
    10441 aagcaccgac gaaaatatgc ccgacctgac catagaacag cttcgtgcca actgttccgt
    10501 cttcctcgtt ccgcagttcg acgaaccgga agccgtcgtt tcctatttcg acgaacgcta
    10561 ccgccagatt ttcgaggcgg agctggcagg ttgggacatc gataaggata aatggccgca
    10621 agatatgggg ctgaaggcgt tttgggaatt tttcgacatc gaaatccacg atatggtgtt
    10681 ggacatggaa gaagcggaat tgaacattac ccccgtgttc gacaacatga tgtaaggctg
    10741 tgcgcgcctt tcagacggca ttgaggccgt cccgcatcct gaacatcctg actgtatcgc
    10801 ttcacgccgc ctcccttgcc gtctgcctga cttggtttta cggctggatg atgtggttcg
    10861 gtttggcggc tttggtggca agttacgcat actcgctcag gataacgaat ctgaaacacc
    10921 gccatgccat aaccgccatt accatagacc gcgacggaca ggcggaaatc gtatccggca
    10981 aagacaaaac agcggcaaca cttgcgggca gcagtatggt tacgccttat gccttattct
    11041 tacaatggga cacaggcggc acaaccgtca gccaatgcat catacccgac atgacggaca
    11101 aagaatccta ccggcggctg aaagtctgga tactttggcg gcagccgaaa aaaaccgccg
    11161 aaaccgatac accaagctga tttcagacgg catttgaaca cggaacactc aatgaaaaca
    11221 ctgcaagact ggctctcgca tttggaaacc gcccacagcg gcggcttgat cgatatgggc
    11281 ttggaacgcg taggcgaagt gaaaaaacgg atgaagctca cgccgcaatg ccccgtcgtc
    11341 gttgtcgcgg gaacaaacgg caaaggttcg gtctgcgcct acctgacaca gatttacaaa
    11401 caggcgggct acaaaaccgg cacactgacc agcccgcatt tattgcgtta caacgaacgc
    11461 atcgccatca acgccgaacc cgtttcggac gatacgatta ttgcctcttt cgagcgcatc
    11521 gaagcggcgc gcagcgaaat atcgctgact tattttgaat tcaatacgtt ggcggccgtc
    11581 gacatcttca tgcgcgaaca ggttgacgtg atgatattgg aagtcggctt gggcggacgc
    11641 ttggacgcgg tcaacgcgtt tgacggcgat tgcgcggtgg ttaccagcgt ggatttggac
    11701 catcaggcat ttttgggcga tacggtcgag caggtcggct ttgaaaaagc aggcgtgttc
    11761 cgtagcggca aacccgccat ctgcggtcaa aaccccgcgc ccaaatcgtt gctttcacac
    11821 gccgaagcca taggcgcgaa actgctgatg gtgcagcgcg atttcgagtt tcacgcgctg
    11881 gaaaacatcc aatggaacta ccacttccga ccgcagcatt cagacagccc cgctcgcaac
    11941 cgtaattccc tgcccttccc cgcattgcgc ggcgcatacc aactttccaa tgccgcctgt
    12001 gcgctgaccg tgttggaatg tttgaacgac aaattgccgg tggacatcgg tgcaatcaaa
    12061 cgcggattgc tgctggttga aaatcccgga cgcttccaag tcctgcccgg ccggccgctg
    12121 accgttttgg acgtcggaca caatccccac gctgcccgcg ccctgcgccg cagcctgatt
    12181 aatttggcgt ttgcgcaaaa acgcaccgcc gtgttcagta tgctgtccga caaagacata
    12241 gacggcgtgt tggaaattgt caaagaccag tttgacgaat ggtatatcgc acctttggac
    12301 atgccgcgcg gcatgacgct cgagagcctg caaaacaaac tgcacgaaca cagcatcgaa
    12361 aacatacaga cattcgccgc cgtccgcgaa gcataccggg cggcagcctc aaaagcgggc
    12421 gagaacgaca gaatcgtcgt tttcggctca tttcataccg ttgccgatgt catgtcggta
    12481 ctttaaaagg aaacttctat gtccgaaaac aaacaaaacg aagtcctgag cggttacgaa
    12541 caactcaaac ggcgcaaccg ccgccgcctc gtaacggcaa gttgcttggt tgccgcctcc
    12601 tgcatcctgc tggcagccgc cctcagttcc ggccctgccg aacagactgc cggcgaaaca
    12661 agcggcgtag aaaacaaagc ggcaggtgcg gcacaaaccc ctgccttgaa atccgccgcc
    12721 gacaaaccgc aggacttggc aggcgaagac aagccttctg ccgccgacag cgaaatcagc
    12781 gagcctgaaa acgtaggcgc gccgctggtg ctgattaacg agcgcctcga agacagcaac
    12841 atcaaaggtt tggaagcatc cgagaaactg caacaggcag aaaccgccaa aaccgcaccg
    12901 aagcaggcaa aacaacgcgc tgccgaaaaa gtgccggcaa ctgccgacag tacggatacg
    12961 gtagcgtttg aaaaaccgaa acgcactgcc gaaacaaaac cgcaaaaagc ggaacgcact
    13021 gccaaagcca agcccaaagc caaagaaacc aaaaccgccg aaaaagttgc cgacaaaccg
    13081 aaaactgccg ccgaaaaaac caaaccggat acggcaaaat ccgacagcgc ggtaaaagaa
    13141 gcgaaaaaag ccgacaaggc tgaaagcaaa aaaacagccg aaaaagaccg ttcggacggc
    13201 aaaaaacacg aaacggcaca aaaaaccgac aaagcggaca agaccaaaac cgccgagaag
    13261 gaaaaatccg gtaaaaaagc cgccattcag gcaggttatg ccgaaaaaga acgcgcctta
    13321 agcctccagc gcaaaatgaa ggcggcgggt atcgattcga ccatcaccga aattatgacc
    13381 gacaacggca aagtttaccg cgtcaaatca agcaactata aaaacgcaag ggatgccgaa
    13441 cgcgatttga acaaattgcg cgtacacggt atcgccggtc aggtaacgaa tgaatagcct
    13501 ccccattgcc gacctcctcg tctccgccgt catcgccgcc tgcatcgtca tttccacgat
    13561 gcgcggcgtg attacggagg caggctcaat ggcggcatgg gtggtttcct tctttttcgc
    13621 caaactcttt gccgcaccct tcgccgacat cgcctttgca tcgttccaac cccgcctgtt
    13681 tgcattggct ctgtcgttca tttccctatt cgtcattgcc tgtctgatcc agaaaatact
    13741 ccgctcgctg ctgaccgggg cagtttcggc ggtcggtttg ggctttgcca accgcatttt
    13801 gggcggcgta ttcggtgcat tgaaaggcat tttgattatt accctgctgg tcatgctcgc
    13861 ttcaaaaacc gacctgcccg ataccgaaga atggcggcaa tcttacacac tgccgttttt
    13921 cgtatcgctt tccgaagccg tgttgaacca tagcggcggc acggcggaaa ctccggaaga
    13981 cgattgattg ccatacggat atttcagacg gcattctctt ttatgccgtc tgaaatgttt
    14041 tttcctttcc tcagccatat cacagattat agtggattaa atttaaacca gtacggcgtt
    14101 gcctcgcctt gccgtactat ttgtactgtc tgcggcttcg tcgccttgtc ctgatttttg
    14161 ttaatccact ataaatctta ttctccataa acccacctat ctgtccttcg ctcaaatatt
    14221 gtcaacaatt caggcaaaaa accaccgttt actttataat tccgttttac ccttaaacct
    14281 cgaatcggag aagacgatat gtgcggcgta ttaggtttgg tcagtcatga acccgtgaac
    14341 cagtttctgt acgacggctt gcagatgttg cagcacaggg ggcaggatgc ggcgggcatt
    14401 gcaacggcgg aaggcggtac cttccatatg cacaaaggca aaggcatggt gcgcgaagtg
    14461 ttccgcacac gcaatatgcg cgatttgacc ggcaacgccg gtatcgccca cgtccgttat
    14521 cctactgcgg gcaacgcagg cagcagcgcg gaggcgcagc ctttctacgt cagctcgccg
    14581 ttcggcatcg ttttggcgca caacggcaac ctcaccaaca ctgccgaact gtatgaaaac
    14641 gtgtgtaaca aacacctgcg ccacgtcaac accagctccg attccgaagt cttgctcaac
    14701 gtattcgcgc acgaattacg ccgcgaagtc tctaaaaacg ccgacccgca ccggctcaat
    14761 gccgacaata ttttcaacgc cgttgcccaa gtccaccgcc tggtgcgcgg cgcatacggt
    14821 gtgattgcca tgattgcggg ctacggtatg ctcgccttcc gcgaccctta cggcatccgc
    14881 ccgctggtat tgggttcgca aaccgacagc gaaggcagaa aatcctatgc cgtcgcctcc
    14941 gaatccgtcg ccttcaacgc gcttacctac gatttggaac gcgacatccg gccgggcgaa
    15001 gcggtatttg tcggctttga cggcacaatg attgcccgcc aatgcagcga ccgtgccaaa
    15061 ctcagcccct gcctttttga atatgtttat tttgcccgcc ccgactctgt gattgacggc
    15121 gtatccgttt accaatcgcg cttggatatg ggcgtgtcgc tggcggaaaa aatcaaacgc
    15181 gagctgcccg tggacggcat cgatgtcgtg atgcccattc ccgacaccag ccgccccagc
    15241 gcgatggagc ttgccgtcca tctcgacaaa ccctaccgcg agggtttgat taaaaaccgc
    15301 tatatcggcc gcacctttat tatgcccgga caggcgacgc gcaaaaaatc cgtgcgccaa
    15361 aaactcagcc cgatggaaac cgaatttgca ggcaaaagcg tgttgctggt ggacgactcc
    15421 atcgtgcgcg ggacgaccag ccgcgaaatc gtcgaaatgg tacgcgcggc gggcgcgcgc
    15481 aaagtctata tcgcctccgc cgcgcccgaa gtgcgctatc ccaatgtgta cggcattgat
    15541 atgcccacgc gcgaagagtt gattgccaac gggcgcagcg cggcggaaat cgccgccgaa
    15601 atcggcgcgg acggcatcgt atttcaagac ttgggcgatt tggaagccgt cgtcaaagca
    15661 ctcaatccga aaatcgaatc cttcgattcg tcctgtttca acggcattta tcagaccggc
    15721 gacatcgatg atgcctacct cgaccgcctg tctgccgaga aatccggctg cggcggtctg
    15781 aaaatccacc cgagcaggat ggaacacagc atcagcatca gcgatgcggg cgacgaagaa
    15841 taaggcttcc caaaccgcga tgccgtctga aatccgaacg ccgggttttc agacggcatt
    15901 tcccatatcg gcatcacatt tcccgtttca tccgcacaca atatgagtac cgaaaccaaa
    15961 aactacatta cgcccgccgg atggcaggca ttgaaagacg agctttatca actggtcaac
    16021 aaagaacgcc ccgaaatcgt ccaaatcgtc aactgggcgg caggcaacgg cgaccgcagc
    16081 gaaaacggcg actatcttta cggcaaacgc cgtatgcgcg aaatcgaccg ccgcatccgt
    16141 ttcctgacca agcgtttgga gtccgccgtc gtcgtcgatc ccgaattgcg cgaagcgacc
    16201 gaccaagtat ttttcggcgc gaccgtcggc ctgttgcgcg gcgacgggcg cgagcaaacc
    16261 gtcaaaatcg tcggcatcga tgaaatcgat accgcgcaaa acaaaatttc ttggatttcg
    16321 ccgttggcgc gttgcctgat taaagcgcgc gaaggcgacg aagtggtttt gaacacgccg
    16381 gaagggcgtg aggaaattga aatcctttct gtcgaataca tcaaaatcga ctgatcggga
    16441 atgccgtctg aaacggtgca agcgcgccgt ttcccaaata aaggaatacc gaatgaggaa
    16501 aatccgcacc aaaatctgcg gcatcaccac accggaagac gcatcggccg ccgtagcggc
    16561 aggtgcagat gccgtcgggc tggtcttttt ccaaggcagc agccgggccg tcgatattgc
    16621 ccgcgccaaa aaaatcaccg ccgcactgcc gccgtttgtc agcgttgtcg cccttttcgt
    16681 caacgaaagc gcgcaaaaca tccgccgcat ccttgccgaa gtgccgatac acatcatcca
    16741 attccacggc gacgaagacg acacattctg ccgtcagttc caccgcccct atatcaaggc
    16801 cattcgtgtt cagacgacat cagacatccg aaacgccgcc gaccgcttcc ccgacgctca
    16861 ggcactgctt ttcgatgcct accatccttc ggaatacggc ggcaccggac accgcttcga
    16921 ctggacgctg ctggcggaat attcgggcaa accgtgggta cttgccggcg ggctgacccc
    16981 tgaaaacgtc ggcgaagccg tccgcatcac cggagcggaa gcggtcgatg tatccggcgg
    17041 cgtggaagcg tctaaaggca aaaaagaccc agccaaagtc gccgccttta tcgcaaccac
    17101 caaccgccta tcccgttaaa gcaacaaaaa ttgccgccgg aatga
//
LOCUS       DBBZXU010000035        16987 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.035, whole genome shotgun sequence.
ACCESSION   DBBZXU010000035 DBBZXU010000000
VERSION     DBBZXU010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16987
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.035"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACJJDE_000996"
     CDS             complement(51..1220)
                     /gene="metK"
                     /locus_tag="ACJJDE_000996"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HGG7540939.1"
                     /translation="MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAET
                     LVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPD
                     IAQGVNEGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRL
                     PWLRPDAKAQLTVVYDSETGKVKRIDTVVLSTQHDPSIAYEELKNAVIEQIIKPVLPS
                     ELLTDETKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVD
                     RSAAYACRYVAKNIVAAGLATQCQIQVSYAIGVAEPTSISIDTFGTGKISEEKLITLV
                     REHFDLRPKGIVQMLDLLRPIYSKSAAYGHFGREEPEFTWERTDKAAALRAAAGL"
     regulatory      complement(1403..1513)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            1566..2462
                     /locus_tag="ACJJDE_000997"
     CDS             1566..2462
                     /locus_tag="ACJJDE_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7540940.1"
                     /translation="MFRLQFGLFPPLRTAMHILLTALLKCLSLLPLSCLHTLGNRLGH
                     LAFYLLKEDRARIVANMRQAGMNPDPKTVKAVFAETAKGGLELAPAFFRKPEDIETMF
                     KAVHGWEHVQQALDKHEGLLFITPHIGSYDLGGRYISQQLPFPLTAMYKPPKIKAIDK
                     IMQAGRVRGKGKTAPTSIQGVKQIIKALRSGEATIVLPDHVPSPQEGGEGVWVDFFGK
                     PAYTMTLAAKLAHVKGVKTLFFCCERLPGGQGFDLHIRPVQGELNGDKAHDAAVFNRN
                     AEYWIRRFPTQYLFMYNRYKMP"
     gene            complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACJJDE_000998"
     CDS             complement(2506..3570)
                     /gene="tsaD"
                     /locus_tag="ACJJDE_000998"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HGG7540941.1"
                     /translation="MLVLGIESSCDETGVALYDTERGLRAHCLHTQMAMHAEYGGVVP
                     ELASRDHIRRLVPLTEGCLAQAGASYGDIDAVAFTQGPGLGGALLAGSSYANALALAL
                     DKPVIPVHHLEGHLLSPLLAEEKPDFPFVALLVSGGHTQIMAVRGIGDYALLGESVDD
                     AAGEAFDKTAKLLGLPYPGGAKLSELAESGRPEAFVFPRPMIHSDDLQMSFSGLKTAV
                     LTAVEKVREANGSETIPEQTRNDICRAFQDAVVDVLAAKVKKALLQTGFRTVVVAGGV
                     GANRKLRETFGNMTVQIPTPKGKPKHPSEKVSVFFPPTAYCTDNGAMIAFAGAMHLGK
                     GREVGAFNVRPRWPLSEIVR"
     gene            3577..3702
                     /locus_tag="ACJJDE_000999"
     CDS             3577..3702
                     /locus_tag="ACJJDE_000999"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540942.1"
                     /translation="MPLKTEKRILADFGTTAVSQKRNMPSEDRSDGIVAPYQSVP"
     gene            complement(3687..4874)
                     /gene="ccsB"
                     /locus_tag="ACJJDE_001000"
     CDS             complement(3687..4874)
                     /gene="ccsB"
                     /locus_tag="ACJJDE_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcsB"
                     /protein_id="HGG7540943.1"
                     /translation="MTEHYKTLPEHELLIQKSLISNLNLWDWVFAVLVFAATVFVQTR
                     SGMHMDIYETVMLWASAGIAVFLGWFFKPMRWFVPLSVLLAYAAVGLYGGNIKSAEIF
                     LLRYFLSSQSAIMWQCAFVFFALFAYISGAVLASVKNVPTNTLLGMGTVFAWVSAVAG
                     FTGLLVRWHESYLLRPDAGHIPVSNLYEVFILFLVITALMYLYYEGKFAIQKLGGFVF
                     GFMAVVVGFVLWYSVSREAHTIQPLIPALQSWWMKIHVPANFIGYGAFCISAMLGIAE
                     LVSLRAEGKGGKLWLPPSALIDEVMYKAIAVGFLFFTIATILGALWAADAWGRYWSWD
                     PKETWAFIVWLNYAVWLHLRLVAGWRGKVLAWWAIIGLFVTAFAFIGVNMFLSGLHSY
                     GTL"
     gene            complement(4867..6819)
                     /locus_tag="ACJJDE_001001"
     CDS             complement(4867..6819)
                     /locus_tag="ACJJDE_001001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein ResB"
                     /protein_id="HGG7540944.1"
                     /translation="MRFAVALLSLLGIASVIGTVLQQNQPQTDYLVKFGSFWAQIFGF
                     LGLYDVYASAWFVVIMMFLVVSTSLCLIRNVPPFWREMKSFREKVKEKSLAAMRHSSL
                     LDVKIAPEVAKRYLEVQGFQGKTINREDGSVLIAAKKGTMNKWGYIFAHVALIVICLG
                     GLIDSNLLLKLGMLTGRIVPDNQAVYAKDFKPESILGASNLSFRGNVNISEGQSADVV
                     FLNADNGILVQDLPFEVKLKKFHIDFYNTGMPRDFASDIEVTDKATGEKLERTIRVNH
                     PLTLHGITIYQASFADGGSDLTFKAWNLGDASREPVVLKATSIHQFPLEIGKHKYRLE
                     FDQFTSMNVEDMSEGAEREKSLKSTLNDVRAVTQEGKKYTNIGPSIVYRIRDAAGQAV
                     EYKNYMLPVLQEQDYFWITGTRSGLQQQYRWLRIPLDKQLKADTFMALREFLKDGKGR
                     KRLVADATKDAPAEIREQFMLAAENTLNIFAQKGYLGLDEFITSNIPKEQQDKMQGYF
                     YEMLYGVMNAALDETIRRYGLPEWQQDEARNRFLLHSMDAYTGLTEYPAPMLLQLDGF
                     SEVRSSGLQMTRSPGALLVYLGSVLLVLGTVLMFYVREKRAWVLFSDGKIRFAMSSAR
                     SERDLQKEFPKHVESLQRLGKDLNHD"
     gene            complement(7096..7719)
                     /locus_tag="ACJJDE_001002"
     CDS             complement(7096..7719)
                     /locus_tag="ACJJDE_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7540945.1"
                     /translation="MKRLTLLAFVLAAGAVSASPKADVEKGKQVAATVCAACHAADGN
                     SGIAMYPRLAAQHTAYIYHQTIGIRDGKRTHGSAAVMKPVVMNLSDQDILNVSAFYAK
                     QQPKSGEANPKENPELGAKIYRGGLSDKKVPACMSCHGPSGAGMPGGGSEIQAYPRLG
                     GQHQAYIVEQMNAYKSGQRKNTIMEDIANRMSEEDLKAVANFIQGLR"
     gene            7925..8554
                     /gene="yihA"
                     /locus_tag="ACJJDE_001003"
     CDS             7925..8554
                     /gene="yihA"
                     /locus_tag="ACJJDE_001003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTP-binding protein
                     YihA/YsxC"
                     /protein_id="HGG7540946.1"
                     /translation="MNLFQNAKFFTTVNHLKDLPDTPLEIAFVGRSNAGKSSAINTLT
                     NHVRLAYVSKTPGRTQHINFFELQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQ
                     RKQLIGLVLIMDARHPLKELDIRMLDFFHTTGRPVHILLSKADKLSKNEQIKTLSQVK
                     KLLKPYSDRQNISVQLFSSLKKQGIDEANRTVGSWFDAADAAASSPEEN"
     gene            complement(8675..11071)
                     /locus_tag="ACJJDE_001004"
     CDS             complement(8675..11071)
                     /locus_tag="ACJJDE_001004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HGG7540947.1"
                     /translation="MIKKILTTCFGLVFGFCVFGVGLVAIAILVTYPKLPSLDSLQHY
                     QPKMPLTIYSADGEVIGMYGEQRREFTKIGDFPEVLRNAVIAAEDKRFYRHWGVDVWG
                     VARAAVGNVVSGSVQSGASTITQQVAKNFYLSSEKTFTRKFNEVLLAYKIEQSLSKDK
                     ILELYFNQIYLGQRAYGFASAAQIYFNKNVRDLTLAEAAMLAGLPKAPSAYNPIVNPE
                     RAKLRQKYILNNMLEEKMITVQQRDQALNEELHYERFVRKIDQSALYVAEMVRQELYE
                     KYGEDAYTQGFKVYTTVRADHQKVATEALRKALRNFDRGSSYRGAENYIDLSKSEDVE
                     ETVSQYLSGLYTVDKMVPAVVLDVTKKKNVVIQLPGGRRVTLDRRALGFAARAVNNEK
                     MGEDRIRRGAVIRVKNNGGRWAVVQEPLLQGALVSLDAKTGAVRALVGGYDFHSKTFN
                     RAVQAMRQPGSTFKPFVYSAALSKGMTASTVVNDAPISLPGKGPNGSVWTPKNSDGRY
                     SGYITLRQALTASKNMVSIRILMSIGVGYAQQYIRRFGFRSSELPASLSMALGTGETT
                     PLKVAEAYSVFANGGYRVSSHVIDKIYDRDGRLRAQMQPLVAGQNAPQAIDPRNAYIM
                     YKIMQDVVRVGTARGAAALGRTDIAGKTGTTNDNKDAWFVGFNPDVVTAVYIGFDKPK
                     SMGRVGYGGTIAVPVWVDYMRFALKGKQGKGMKMPEGVVSSNGEYYMKERMVTDPGLT
                     LDNSGIAPQPSRRAKEDDGGAAEGGRQAADDEVRQDMQETPVLPSNTGSKQQQLDSLF
                     "
     gene            11223..12338
                     /gene="pilM"
                     /locus_tag="ACJJDE_001005"
     CDS             11223..12338
                     /gene="pilM"
                     /locus_tag="ACJJDE_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0043683 - type IV pilus assembly [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus biogenesis protein PilM"
                     /protein_id="HGG7540948.1"
                     /translation="MRLFKSLKNPKKTDAKLPKKSSGLNNRAAIGIDIDQHSIKMVQL
                     SGRSLNQIQLEKYVIAKLPKNIIQGNKVQNYDQLVTYLQQAYAKLGTSCKNIIASVPQ
                     NLATIEQLTYTDKDAELDLQGFVESSISEVSSISLEEANYDYQVLSQSAAGEAVLAVA
                     SRKDEIEPLIDAFNAAGMKLSALDVDIFGQYNAYALWINHFAPELAAEKVAIFGVYAA
                     QTYALVIQDGKILYKQETSVSEEQLNQLIQRTYQVTEEKAEEIINSPQKPSDYQESVA
                     NYFNQQITQEIQRVLQFYYTTQTADDMTDIKHILLTGEAARQEGIAQTVASQTNADVQ
                     CVHPARYFADNLKTDKQQFELDAPTLTRAFGLAVRGL"
     gene            12341..12940
                     /locus_tag="ACJJDE_001006"
     CDS             12341..12940
                     /locus_tag="ACJJDE_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HGG7540949.1"
                     /translation="MNNLIKINLLPYREEMNKRKQQQFKTLMYGAVLTGVAAVAATYL
                     FIDNMINNQSERNTLLETSIAHLDTELSEIQKLKQEKDAFLIKKNKVEELQLKRLQAA
                     KILDSLNEAVPGSTYLTSLDAVTADSYRLSGRTSSDNRVAAMMRAMPNTGIFKQPELL
                     SIKKNNSHQEFTLQATLQPIVKAAESKENPASGNAQEAN"
     gene            12941..13588
                     /locus_tag="ACJJDE_001007"
     CDS             12941..13588
                     /locus_tag="ACJJDE_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4a pilus biogenesis protein PilO"
                     /protein_id="HGG7540950.1"
                     /translation="MASKSSKTNLDLNNLHLLNLPARLFIALLAVAAVLGLGYAGLFK
                     SQMESLEEYEAKETELKNTYKQKSIDAASLNNLRDELASIRSAFDIMLKQLPTDAEIP
                     NLVQELHQAGSSNGLRLDSVMPQPPVDDGPIKRLPYSISITGNYEQISQFTRDVGSLS
                     RIITLESLKIAQSPENGGNPDGKSSILNLSAIATTYQAKSVEELAAEAAQNAEQK"
     gene            13606..14151
                     /locus_tag="ACJJDE_001008"
     CDS             13606..14151
                     /locus_tag="ACJJDE_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein PilP"
                     /protein_id="HGG7540951.1"
                     /translation="MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAP
                     TLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDTKRIKETLEKFSLENMRYVGILK
                     SGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
                     LLLNSSDKNTEQAAAPAAEQN"
     gene            14170..16479
                     /gene="pilQ"
                     /locus_tag="ACJJDE_001009"
     CDS             14170..16479
                     /gene="pilQ"
                     /locus_tag="ACJJDE_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus secretin PilQ"
                     /protein_id="HGG7540952.1"
                     /translation="MNTKLTKIISGLFVATAAFQTASAGNITDIKVSSLPNKQKIVKV
                     SFDKEIVNPTGFVTSSPARIALDFEQTGISMDQQVLEYADPLLSKISAAQNSSRARLV
                     LNLNKPGQYNTEVRGNKVWIFINESDDTVSAPARPAVKAAPAAPAKQQAAAPSTKSAV
                     SVSKPFTPAKQQAAAPFTESVVSVSAPFSPAKQQAAASAKQQTAAPAKQQAAAPAKQQ
                     AAAPAKQTNIDFRKDGKNAGIIELAALGFAGQPDISQQHDHIIVTLKNHTLPTTLQRS
                     LDVADFKTPVQKVTLKRLNNDTQLIITTAGNWELVNKSAAPGYFTFQVLPKKQNLESG
                     GVNNAPKTFTGRKISLDFQDVEIRTILQILAKESGMNIVASDSVNGKMTLSLKDVPWD
                     QALDLVMQARNLDMRQQGNIVNIAPRDELLAKDKAFLQAEKDIADLGALYSQNFQLKY
                     KNVEEFRSILRLDNADTTGNRNTLVSGRGSVLIDPATNTLIVTDTRSVIEKFRKLIDE
                     LDVPAQQVMIEARIVEAADGFSRDLGVKFGATGKKKLKNDTSAFGWGVNSGFGGDDKW
                     GAETKINLPITAAANSISLVRAISSGALNLELSASESLSKTKTLANPRVLTQNRKEAK
                     IESGYEIPFTVTSIANGGSSTNTELKKAVLGLTVTPNITPDGQIIMTVKINKDSPAQC
                     ASGNQTILCISTKNLNTQAMVENGGTLIVGGIYEEDNGNTLTKVPLLGDIPVIGNLFK
                     TRGKKTDRRELLIFITPRIMGTAGNSLRY"
BASE COUNT         4580 a         4822 c         3882 g         3703 t
ORIGIN      
        1 aaaatgccgt ctgaactgtt cagacggcat ttttgatttt caaaccggaa ttacagcccc
       61 gctgccgccc tcaatgcagc agctttgtcg gtgcgctccc aagtgaactc aggttcttcg
      121 cggccgaaat gtccgtaagc ggcggattta ctgtaaatcg ggcgcaagag atcgagcatt
      181 tggacgatgc ctttggggcg caggtcgaaa tgttcgcgaa ctaaggtaat cagtttttcc
      241 tcgctgattt tgcctgtgcc gaaagtgtcg atggaaatcg aagtcggttc ggcaacgccg
      301 atggcgtagg aaacttggat ttggcattgg gttgccaatc ctgcggcgac gatgtttttc
      361 gccacatagc ggcaggcgta ggcggcggaa cggtcaacct tggacgggtc tttgccggaa
      421 aacgcgccgc cgccgtgcgg agccgcgccg ccgtaggtat cgacgatgat tttacggccg
      481 gtcaaaccgc agtcgccttg cgggccgccg atgacgaagc ggccggtcgg gttgatcagg
      541 tatttggttt cgtcggtcag cagttcagac ggcaggacgg gcttgataat ctgctcgatg
      601 acggcgtttt tcagttcttc gtaagcgatg gacggatcgt gctgggtaga gaggacgacg
      661 gtatcaatgc gttttacctt accggtttcg ctgtcgtaaa ccacggtcaa ctgcgctttt
      721 gcgtcgggac gcagccacgg caggcggccg tctttacgca attcgctttg gcgttgcatc
      781 aggcggtggc tgtaatagat ggcaaacggc atcagggtcg gggtttcgtc gcaggcataa
      841 ccgaacatca aaccttggtc gcctgcgcct tggttcaagt cgataccttc gccttcgttt
      901 acgccttggg cgatgtcggg ggattgttgg tcgtagtaca cgccgaccgc gcagccgttg
      961 gcatcaaagc ccagctcgga ggagttgtag ccgatgcgtt tgatggtttc gcgtgcgact
     1021 ttgatgtagt ccacttgggc ggtggtggtg atttcgcctg ccaatacgca caagcctgtg
     1081 ttgaccaaag tttctgcggc gacacgcgct ttggggtctt gcgccaagat ggcatccaaa
     1141 atcgcatcgg atacttggtc ggcaactttg tccggatggc cttcggatac cgattcggaa
     1201 gtaaacagat attcgctcat tgagattttc cttgaaaaac aaaccatctt cttcagacgg
     1261 catgttgtat gaacataatg tcgacagcgg gaaatatagc aaaatttccc tattcatacc
     1321 attcagttga gaaatattcc catttgaatg gcactttgga atctctgccc gtacgtttct
     1381 tacaggcaaa aaaattcccg catcaagcgg gtttggattg ctctggtgag ccacatcggc
     1441 ttttcaaccg tccaccttac ttttcctttt gaaaagcagg ttggcatgga attcccaact
     1501 cttaatgcag cgcggatggt agcagaaaag cctttccgcc gcaatacttc cctttttcag
     1561 acggcatgtt tcgtttacaa ttcgggctgt ttcccccttt gcgaaccgcc atgcacatcc
     1621 tgttgaccgc cctgctcaaa tgcctctccc tgctgccact ttcctgtctg cacacgctgg
     1681 gaaaccggct cggacatctg gcgttttacc ttttaaagga agaccgcgcg cgcatcgtcg
     1741 ccaatatgcg tcaggcaggc atgaatcccg accccaaaac agtcaaagcc gtttttgcgg
     1801 aaacggcaaa aggcggtttg gaacttgccc ccgcgttttt cagaaaaccg gaagacatag
     1861 aaacaatgtt caaagcggta cacggctggg aacatgtgca gcaggctttg gacaaacacg
     1921 aagggctgct attcatcacg ccgcacatcg gcagctacga tttgggcgga cgctacatca
     1981 gccagcagct tccgttcccg ctgaccgcca tgtacaaacc gccgaaaatc aaagcgatag
     2041 acaaaatcat gcaggcgggc agggttcgcg gcaaaggaaa aaccgcgcct accagcatac
     2101 aaggggtcaa acaaatcatc aaagccctgc gttcgggcga agcaaccatc gtcctgcccg
     2161 accacgtccc ctcccctcaa gaaggcgggg aaggcgtatg ggtggatttc ttcggcaaac
     2221 ctgcctatac catgacgctg gcggcaaaat tggcacacgt caaaggcgtg aaaaccctgt
     2281 ttttctgctg cgaacgcctg cctggcggac aaggtttcga tttgcacatc cgccccgtcc
     2341 aaggggaatt gaacggcgac aaagcccatg atgccgccgt gttcaaccgc aatgccgaat
     2401 attggatacg ccgttttccg acgcagtatc tgtttatgta caaccgctac aaaatgccgt
     2461 aacgaaaata aaaatgccgt ctgaacaatt tcagacggca ttttgtcatc tgacgatttc
     2521 cgacagcggc cagcgcggac ggacattgaa cgcaccgacc tccctgccct tgcccaggtg
     2581 catcgcaccg gcaaaggcaa tcatggcacc gttgtccgtg cagtatgccg tcggcgggaa
     2641 aaacacgctg actttttcgg acggatgttt cggcttgcct tttggggtcg ggatttgcac
     2701 cgtcatattg ccgaaagttt cacggagttt gcggtttgca ccgaccccgc cggcgaccac
     2761 tacggttctg aaccctgtct gcaacagggc ttttttcact ttcgccgcca acacatcgac
     2821 taccgcatct tgaaacgcac ggcaaatatc gttgcgggtt tgctcgggaa tggtttccga
     2881 accgtttgcc tcacgcactt tttcaacggc agtcaaaaca gcggttttca aacctgaaaa
     2941 actcatctgc aaatcgtcgg aatgaatcat cgggcgcgga aaaacaaacg cttcgggcct
     3001 gcccgattcc gcaagttccg acagtttcgc accgcccgga tacggcaagc ccagcagttt
     3061 cgccgttttg tcgaatgcct cgcccgccgc atcatcgacg ctctcgccca aaagcgcgta
     3121 gtcgcctatg cccctgaccg ccataatctg cgtatgcccg cccgaaacca gcagcgcgac
     3181 aaaaggaaag tcgggttttt cctccgccaa cagcggcgac agcagatgtc cttccaaatg
     3241 atggacggga ataacaggct tgtccaacgc taaagccagc gcgttggcgt agctcgaacc
     3301 cgccagcagc gcaccgccca aaccgggccc ctgcgtaaag gcaaccgcgt caatgtcgcc
     3361 atacgatgcg cccgcctgcg ccaaacagcc ttcagtcaac ggaacaaggc ggcggatatg
     3421 gtcgcggctt gccaattccg gcacaacccc gccgtattcg gcgtgcattg ccatttgagt
     3481 gtgcaggcag tgcgcccgca atccacgttc cgtatcgtaa agcgcaacac ctgtttcgtc
     3541 gcaagaagac tcgattccta ataccaacat ggtctgatgc cgttaaaaac tgaaaaacgt
     3601 attttagcgg atttcggcac gactgccgta tcccaaaaac ggaacatgcc gtctgaagac
     3661 cgttcagacg gcatcgtcgc accgtatcaa agcgttccgt aagaatgcag cccgctcaaa
     3721 aacatattca cgccgataaa ggcaaatgcg gttacgaaca aaccgataat cgcccaccac
     3781 gccagcactt tgccgcgcca accggcaacc agccgcaagt gcagccaaac ggcgtaattg
     3841 agccagacga tgaacgccca cgtctctttc ggatcccaac tccaatagcg tccccaagca
     3901 tctgccgccc acagcgcacc caaaatggtg gcaatagtaa agaacagaaa gccgacggca
     3961 atcgccttat acatcacctc gtcgatcaat gccgacggcg gcagccacag ttttccgcct
     4021 tttccttccg cacgcaggga aaccagttcg gcaataccga gcatcgcgga aatgcaaaac
     4081 gcgccgtaac cgataaagtt tgccggaacg tggattttca tccaccagga ctggagcgcg
     4141 ggaatcagcg gctggatggt atgcgcctcg cgggacacgc tgtaccacaa gacaaatcca
     4201 accacgaccg ccataaagcc gaacacgaag ccgcccaatt tctgtatggc gaacttacct
     4261 tcataataaa gatacatcag cgcggtaatc accaaaaaca ggatgaacac ttcatacagg
     4321 ttggaaaccg gaatatgccc cgcatcggga cggagcagat agctttcgtg ccaacgtacc
     4381 agcagaccgg taaagcctgc tacggcagac acccatgcaa acacggttcc catacccaac
     4441 agcgtgttgg tcggcacatt ttttacgctt gccaaaaccg cgcccgaaat ataagcgaac
     4501 agggcgaaaa agacaaaggc gcactgccac atgatcgccg attggctgct gaggaaatac
     4561 cgcaacagga aaatctctgc cgatttgatg ttgccgccat acagaccgac ggcggcatag
     4621 gcaagcaata cgcttaaagg aacaaaccag cgcatcggtt tgaaaaacca acccaaaaac
     4681 acggcaatac cggcactcgc ccacaacatg accgtttcgt aaatgtccat atgcataccg
     4741 gaacgggtct gtacgaaaac cgtagccgca aaaaccagca cggcaaatac ccaatcccaa
     4801 agattcagat tgctgatcaa agacttctga atcagcagct cgtgttccgg aagggtttta
     4861 tagtgttcag tcatgattca agtccttgcc gagccgttgc agactctcga cgtgttttgg
     4921 aaattccttc tgcaaatccc gttcactgcg ggccgaagac atggcaaaac ggattttgcc
     4981 gtctgaaaac aatacccacg cccgtttttc gcgcacataa aacatcaata ccgtacccaa
     5041 taccaacagc accgagccga gatagaccaa aagcgcaccc ggggaacggg tcatctgcaa
     5101 acccgacgaa cgcacctcgg aaaacccatc aagttgcagc agcataggcg cgggatattc
     5161 ggtcaaaccc gtgtacgcat ccatactgtg cagcaggaaa cggttccgcg cttcatcctg
     5221 ctgccattcg ggcaagccgt accggcgtat ggtttcatcc aaagcagcgt tcatcacgcc
     5281 gtaaagcatt tcgtagaaat agccctgcat cttatcctgc tgctctttcg ggatattgga
     5341 cgtaataaat tcgtccaatc ccaaatagcc tttttgtgca aagatgttca gcgtgttttc
     5401 cgcagccagc atgaattgtt cgcggatttc ggcaggtgcg tctttggttg cgtcggcaac
     5461 cagacgtttg cgccccttcc cgtctttcag aaactcgcgc aacgccataa aggtgtccgc
     5521 tttcaactgc ttgtccaagg ggatacgcag ccagcggtat tgctgctgca agccgctgcg
     5581 cgtgccggta atccaaaaat aatcctgttc ctgcaaaacc ggcagcatat agtttttata
     5641 ttcgaccgcc tgccctgccg catcacggat acggtaaaca atggaagggc cgatattggt
     5701 gtatttttta ccttcctgag taacggcgcg gacatcgttc agcgtggatt tcaggctttt
     5761 ttcccgttcc gcgccctcgc tcatgtcctc cacattcata gaagtgaact gatcgaactc
     5821 aagacgatat ttgtgtttgc caatttccaa cggaaactgg tgtatggatg ttgccttcaa
     5881 cacgacaggc tcgcgcgaag catcacccaa attccacgcc ttgaatgtca aatccgaacc
     5941 gccgtcggca aaactcgcct gataaatcgt gatgccgtgc aaggtcaaag gatggttcac
     6001 gcggatggtg cgctcgagtt tctcaccggt tgccttgtcc gtcacttcaa tatcactggc
     6061 aaaatcgcgc ggcataccgg tattgtaaaa gtcgatatga aattttttca gtttgacttc
     6121 aaaaggcaag tcctgaacca atatcccgtt gtcggcattc aggaaaacca catccgcact
     6181 ctgcccctcg gaaatattga cgttgcccct aaatgagaga ttggacgcac ccaaaatact
     6241 ttcgggcttg aaatccttgg cataaaccgc ctgattgtcc ggaacaatcc gaccggtcag
     6301 catacccagt ttcaacagca ggttactgtc tatcaacccg cccaggcaaa tgacaatcaa
     6361 agcaacatgg gcaaagatat agccccattt gttcattgtg ccttttttgg cggcaatcag
     6421 aaccgacccg tcttcacggt taatggtttt tccctgaaaa ccttgtactt ccagataacg
     6481 tttggcaacc tcgggcgcaa tttttacatc caacagcgaa gaatggcgca tcgccgccag
     6541 agatttttct ttaacctttt cccgaaaaga cttcatttcg cgccagaacg gcggcacatt
     6601 gcgaatcagg cacaaactgg tagaaaccac caaaaacatc atgataacga caaaccatgc
     6661 cgaagcatag acgtcataca gtcccagaaa accaaaaatc tgcgcccaaa acgatccgaa
     6721 tttgaccaaa taatccgtct gcggctggtt ttgctgcaac accgtaccga taaccgatgc
     6781 aatacccagc agactgagca aagcgactgc aaagcgcatg gagctgaaaa aagcgaacca
     6841 cggacgggaa agaagtgggg gagatctacg ggatttactc attgtgtgtt tattccgcca
     6901 tcaggaatat gggaaagcag aattgggcaa acagaaaaca acgtcccgat tctactgtct
     6961 tgatgctttt tatttcaaga caatgaagac agcctgcatc gattccaacg gttgcgattg
     7021 aaaaaactta tcgcagaatt gcctgaagcc gtctgaaaac ttttcagacg gcctctaaaa
     7081 cagactattg cggaattaac gcaaaccttg gataaagttg gcgaccgctt tcaaatcttc
     7141 ttcagacata cggtttgcaa tatcttccat gatggtattt ttacgctgac cggacttgta
     7201 ggcattcatc tgttcaacaa tatatgcctg atgctgaccg cccaaacgcg gataagcctg
     7261 aatttcgctt ccgcctcccg gcatacccgc accgctcgga ccgtggcagg acatacacgc
     7321 cggcactttt ttatcgctca aaccgccgcg atagattttc gcacccaatt cgggattttc
     7381 cttaggattg gcttcaccgg atttgggctg ctgtttggca tagaatgcgg atacgttcaa
     7441 aatatcctga tcgctcaaat tcattaccac cggtttcatc acagctgccg aaccgtgggt
     7501 gcgtttaccg tcgcggatgc cgatagtttg atgatagatg taagcagtat gctgtgccgc
     7561 caaacgcgga tacatcgcaa tgccgctgtt accgtctgct gcatggcaag ccgcacaaac
     7621 cgttgcggca acctgtttgc ctttttccac gtctgctttg ggagaggcgg aaaccgcacc
     7681 ggcagccaaa acaaaggcca ataaagtcaa tcgtttcatg gagtgctcct gattacagca
     7741 ttggataacg caacaatgct ctttttatat tcaaatacgg gatttttgac ccgattaaaa
     7801 ccgatgattc tgtaaacgtg ttattctata ctaaatttac attaaattac cactgtgttt
     7861 cacataaaac caaccgcata tttttgctgt cggacaaacg gcggcggaaa acaaggatat
     7921 gcccatgaac ctttttcaaa acgccaaatt cttcacgacg gtcaaccacc ttaaagacct
     7981 gcccgacacc cctctcgaaa ttgcctttgt cggcaggagc aatgccggaa aatccagtgc
     8041 catcaatacc ctgaccaacc atgtccgtct tgcctacgtt tcaaaaacac ccggacggac
     8101 gcagcatatc aacttcttcg agctgcagaa cggcaatttt atggtcgatt tgcccggcta
     8161 cggttatgcc caagtccccg aagcagtacg cgcacattgg gtcaatctgc tcggcgacta
     8221 tctgcaacag cgcaaacagc ttatcgggct ggttttgatt atggatgccc gccatccttt
     8281 aaaagaactc gacatccgta tgctggactt tttccacacg accggcagac cggttcacat
     8341 cctgctgtca aaagccgaca aattatccaa aaacgaacag ataaaaaccc tgtcccaagt
     8401 caaaaaactg ctcaaacctt attccgacag gcaaaacatc agcgtacagc tgttttccag
     8461 cctgaaaaaa caaggtattg acgaggccaa ccgaactgtc ggaagctggt ttgacgcagc
     8521 agatgccgcc gcttcctctc cagaggaaaa ctgaccccaa ttatacggaa accgtatttc
     8581 ccccacttga ccgaccgcaa acatttaaaa aattgccact gccaaatcta aaatgccgtc
     8641 tgaaagactt ttcagacggc attttgcgga gtctttaaaa cagagaatcc aactgctgct
     8701 gtttggaacc agtattactc ggaagcaccg gcgtttcctg catatcttgg cggacttcgt
     8761 catccgccgc ctgccgtccg ccttctgccg cgcccccgtc atcttctttt gcccgtcggg
     8821 aaggttgcgg cgcaataccg ctgttgtcca gcgtcaagcc cggatcggtt accatacgtt
     8881 ccttcatata gtattcgcca ttgctgctga ccacaccttc aggcattttc atccccttgc
     8941 cctgctttcc tttcaacgca aaacgcatat agtccaccca aaccggcacc gcaatcgtac
     9001 cgccgtagcc gacacgcccc atactcttag gtttgtcgaa gccgatatat acggcagtaa
     9061 ccacatcagg gttaaaaccg acaaaccacg catccttatt gtcattggtc gtacccgttt
     9121 taccggcaat atccgttctt cccaacgcag ctgcccccct tgccgtacca acacggacca
     9181 catcctgcat aatcttatac ataatatagg cattgcgcgg atcgattgcc tgaggcgcat
     9241 tttgcccggc caccaaaggt tgcatttggg cgcgcaacct gccgtctctg tcataaatct
     9301 tatcgattac gtgcgaagaa accctatatc cgccgttcgc aaatacgcta tatgcctccg
     9361 ccactttcaa cggcgttgtc tcgcccgtac ctaaagccat agacaggctt gccggcagct
     9421 cggacgacct gaagccgaaa cgccggatat actgttgcgc gtaaccgaca ccgatagaca
     9481 tcaaaatacg gatggaaacc atattcttgg aagccgtcag agcctgtctc aaagtaatgt
     9541 agccggaata tctgccgtct gaatttttag gtgtccaaac cgaaccgttc ggccctttcc
     9601 ccggcaggga aatcggcgca tcgttaacca ctgtggacgc ggtcatcccc ttagataatg
     9661 ccgccgaata gacaaacggc ttaaaggtcg aacccggctg ccgcattgcc tgaacggcac
     9721 gattgaatgt tttgctgtga aaatcataac cgccgaccag cgcgcgcaca gctccggttt
     9781 ttgcatccag cgaaaccaaa gccccctgca gcaacggctc ttgaaccacc gcccaacgcc
     9841 cgccgttgtt tttgacacgg atgaccgcgc ccctgcggat acggtcctcc cccatttttt
     9901 cattattgac cgcgcgggcc gcaaaaccca aggcgcgcct gtcaagcgta acccgcctgc
     9961 cgccgggcag ctgtatgacg acatttttct ttttagtcac atccaacaca acggcgggaa
    10021 ccattttatc gacggtatag agtcccgaca gatactggct gacagtctcc tcgacatctt
    10081 cactcttact caaatcgata tagttttccg caccgcggta gctgctgccg cgatcgaaat
    10141 tccgtagagc cttgcgcaat gcctcggttg ccaccttctg atgatcggcg cggaccgtgg
    10201 tataaacctt aaaaccctgc gtataggcat cttcaccgta tttctcatac agttcctgac
    10261 gcaccatttc cgccacatat aaagcactct gatcgatttt ccgaacaaac cgctcgtaat
    10321 gcagttcctc attcaacgcc tgatcgcgct gttgcacggt aatcatcttc tcctcgagca
    10381 tattgttcaa aatatacttc tggcgcaact tggcacgttc cggattaaca atcggattat
    10441 aggcagacgg agccttgggc agtcccgcaa gcatggcggc ttccgccaaa gtcaaatctc
    10501 ggacattctt attgaaatag atttgcgcgg cagatgcaaa accataggcg cgctgaccga
    10561 ggtaaatctg attgaaatac aactcgagga ttttgtcttt gcttaaagac tgctcgattt
    10621 tataggcaag caacacctca ttgaatttgc gtgtgaacgt tttttcactg ctcaaataaa
    10681 aatttttcgc cacctgctgc gtaatcgtac tcgcacccga ctgcacgctg ccggacacga
    10741 cattgccgac ggcagcgcgg gcaacacccc aaacatccac cccccaatgc cggtaaaagc
    10801 gtttatcctc ggcggcgata accgcattcc gcaacacctc tgggaaatcg ccgatttttg
    10861 taaattcgcg ccgctgctcc ccatacatac cgatgacttc cccatccgcc gaataaatag
    10921 tcaacggcat tttaggctgg taatgctgca aagaatccaa agacggtagt ttcggatacg
    10981 ttaccaaaat agcaatggca accaaaccca ctccaaatac acaaaaccca aaaaccaaac
    11041 caaaacaagt cgttaaaatc tttttaatca tagctgaata ataatttacc attattggta
    11101 ttaaataaag taaaatagca accgatttct acaaagcacg gtttcaatgt gcaaagaaca
    11161 aggaatccat tacggatacc gaaacggtta ctcactgtac aaataaagca ggaactttca
    11221 tcatgcgctt gtttaaaagc ttgaaaaacc ctaaaaaaac agatgccaag ctccctaaaa
    11281 aatcttcggg actcaataac cgcgcggcaa tcggcatcga tatcgaccag cattccatca
    11341 aaatggtcca attgtcagga cgtagtttaa accaaattca attggaaaaa tacgtcattg
    11401 ccaaattacc aaagaatatc attcaaggca ataaagtcca aaattacgat caacttgtta
    11461 catatttgca acaagcctat gccaaactgg gtacttcgtg caaaaacatc atcgcgtccg
    11521 tcccgcaaaa tctggcaacc atcgaacaat tgacctacac agacaaagat gcagaattag
    11581 acctgcaggg gttcgtggag tcctccatct ccgaagtcag ctcgatatcg ctcgaagaag
    11641 ccaattacga ctatcaggtc ttgtcccaat cggccgccgg cgaagctgtg ttggccgtcg
    11701 catcgagaaa ggatgaaatc gaacccctga ttgacgcatt caacgccgcc ggtatgaaat
    11761 tatccgcgct tgatgtggac attttcggac aatacaacgc ctacgcgcta tggataaacc
    11821 atttcgcccc cgagcttgca gccgaaaaag tcgccatttt cggcgtatat gccgcacaga
    11881 cctacgcctt ggtcatccaa gacggaaaaa tcctatacaa acaggaaacc tccgtcagcg
    11941 aagaacagct caaccaactc atccagcgca cctatcaggt aacagaagaa aaagcggaag
    12001 aaatcatcaa ctccccgcaa aaaccttccg attaccaaga aagcgtggca aactatttca
    12061 accagcagat tacccaagaa atacaaaggg tcttgcagtt ttattacacc acgcagaccg
    12121 cagacgatat gaccgacatc aagcatatcc tgctgaccgg ggaagcggcg cgccaggaag
    12181 gtatcgccca aaccgtcgcc tcacaaacca atgcagatgt acaatgcgtc catcccgcgc
    12241 gttattttgc ggacaacctc aaaacagaca aacaacaatt cgaacttgat gcgccgacac
    12301 tgaccagggc gttcggtttg gcggtacggg gattataatt atgaacaatt taatcaaaat
    12361 caacctcctc ccctacaggg aagagatgaa caagcgcaaa cagcagcagt ttaaaacgct
    12421 gatgtacggt gccgtgctga cgggcgttgc cgccgttgcg gcaacctacc tgtttatcga
    12481 caatatgatc aataaccagt cggaaagaaa cacgctgctg gaaacctcca tcgcacactt
    12541 ggataccgag ctgtcggaaa tacaaaagct caaacaggaa aaagatgcct tcctgattaa
    12601 gaaaaacaaa gtcgaggagc tccagctcaa acgcctccaa gccgcaaaaa tcctcgacag
    12661 cctgaatgag gccgtccccg gaagcaccta cctgacctcg ctggatgccg ttaccgccga
    12721 ctcttatcgg ctcagcggca ggacatccag cgacaaccgc gttgccgcca tgatgagggc
    12781 gatgcccaat accggcatat tcaagcaacc cgaattgtta agcatcaaga aaaacaattc
    12841 gcatcaagaa tttacccttc aggcaacatt acaacccatc gtaaaggcgg ccgaatccaa
    12901 agagaatccg gcttcgggaa acgcacagga ggcaaactga atggcttcta aatcatctaa
    12961 aaccaacttg gatctcaaca accttcacct gctcaacctt cctgccaggc tttttatcgc
    13021 cctgctggcc gttgccgccg tgctggggct cggttatgcc ggattgttca aaagccagat
    13081 ggaatccctt gaggaatacg aagcaaaaga aaccgaactg aaaaacacct acaaacagaa
    13141 aagtatcgac gcggccagcc tgaacaacct gagggacgaa cttgcctcaa tccgctctgc
    13201 cttcgatatc atgttgaaac agctgccgac agatgcagaa attcccaatc tggttcaaga
    13261 gcttcatcag gcaggttcga gcaacggcct gcgcttggac agcgttatgc cccaacctcc
    13321 cgtagatgac ggccccatca aaagattacc ctattccatt tccattaccg gaaattacga
    13381 acagatcagc caatttaccc gcgatgtcgg cagcctctcc cgaatcatta cccttgagtc
    13441 gctgaaaatc gcccaatctc cggaaaacgg cggcaatcct gacggcaaga gcagcatcct
    13501 gaacctcagt gccattgcca ccacctacca agcaaaatcc gtagaagagc ttgccgcaga
    13561 agcggcacaa aatgccgagc aaaaataact tacgttaggg aaaccatgaa acactatgcc
    13621 ttactcatca gctttctggc tctctccgcg tgttcccaag gttctgagga cctaaacgaa
    13681 tggatggcac aaacgcgacg cgaagccaaa gcagaaatca tacctttcca agcacctacc
    13741 ctgccggttg cgccggtata cagcccgccg cagcttacag ggccgaacgc attcgacttc
    13801 cgccgcatgg aaaccgacaa aaaaggggaa aatgcccccg acaccaagcg tattaaagaa
    13861 acgctggaaa aattcagttt ggaaaatatg cgttatgtcg gcattttgaa gtctggacag
    13921 aaagtctccg gcttcatcga ggctgaaggt tatgtctaca ctgtcggtgt cggcaactat
    13981 ttgggacaaa actacggtag aatcgaaagc attaccgacg acagcatcgt cctgaacgag
    14041 ctgatagaag acagcacggg caactgggtt tcccgtaaag cagaactgct gttgaattct
    14101 tccgacaaaa acaccgaaca agcggcagca cctgccgcag aacaaaatta agaagaggat
    14161 tactccatta tgaataccaa actgacaaaa atcatttccg gtctctttgt cgcaaccgcc
    14221 gcctttcaga cagcatcggc aggaaacatt acagacatca aagtttcctc cctgcccaac
    14281 aaacagaaaa tcgtcaaagt cagctttgac aaagagattg tcaacccgac cggcttcgta
    14341 acctcctcac cggcccgcat cgccttggac tttgaacaaa ccggcatttc catggatcaa
    14401 caggtactcg aatatgccga tcctctgttg agcaaaatca gtgccgcaca aaacagcagc
    14461 cgtgcgcgtc tggttctgaa tctgaacaaa ccgggccaat acaataccga agtacgcggg
    14521 aacaaagttt ggatattcat taacgaatcg gacgataccg tgtccgcccc cgcacgcccc
    14581 gccgtaaaag ccgcgcctgc cgcaccggca aaacaacagg ctgccgcacc gtctaccaag
    14641 tccgcagtat ccgtatccaa accctttacc ccggcaaaac aacaggctgc cgcaccgttt
    14701 accgagtccg tagtatccgt atccgcaccg ttcagcccgg caaaacaaca ggcggcggca
    14761 tcagcaaaac aacagacggc agcaccagca aaacaacagg cggcagcacc agcaaaacaa
    14821 caggcggcag caccagcaaa acaaaccaat atcgatttcc gcaaagacgg caaaaatgcc
    14881 ggcattatcg aattggctgc attgggcttt gccgggcagc ccgacatcag ccaacagcac
    14941 gaccacatca tcgttacgct gaaaaaccat accctgccga ccacgctcca acgcagtttg
    15001 gatgtggcag actttaaaac accggttcaa aaggttacgc tgaaacgcct caataacgac
    15061 acccagctga ttatcacaac agccggcaac tgggaactcg tcaacaaatc cgccgcgccc
    15121 ggatacttta ccttccaagt cctgccgaaa aaacaaaacc tcgagtcagg cggcgtgaac
    15181 aatgcgccca aaaccttcac aggccggaaa atctcccttg acttccaaga tgtcgaaatc
    15241 cgcaccatcc tgcagatttt ggcaaaagaa tccgggatga acattgttgc cagcgactcc
    15301 gtcaacggca aaatgaccct ctccctcaaa gacgtacctt gggatcaggc tttggatttg
    15361 gttatgcagg cacgcaacct cgatatgcgc caacaaggga acatcgtcaa catcgcgccc
    15421 cgcgacgagc tgcttgccaa agacaaagcc ttcttacagg cggaaaaaga cattgccgat
    15481 ctgggcgcgc tgtattcaca aaacttccaa ttgaaataca aaaatgtgga agaattccgc
    15541 agcatcctgc gtttggacaa tgccgacaca accggaaacc gcaatacgct tgtcagcggc
    15601 aggggcagcg tgctgatcga tcccgccacc aataccctga ttgttaccga tacccgcagc
    15661 gtcatcgaaa aattccgcaa actgattgac gaattggacg tacccgcgca acaagtgatg
    15721 attgaggcgc gtatcgtcga agcggcagac ggcttctcgc gcgatttggg cgttaaattc
    15781 ggcgcgacag gcaagaaaaa gctgaaaaat gatacaagcg cattcggctg gggggtaaac
    15841 tccggcttcg gcggcgacga taaatggggg gccgaaacca aaatcaacct gccgattacc
    15901 gctgccgcaa acagcatttc gctggtgcgc gcgatttcct ccggtgcctt gaatttggaa
    15961 ttgtccgcat ccgaatcgct ttcaaaaacc aaaacgcttg ccaatccgcg cgtgctgacc
    16021 caaaaccgca aagaggccaa aatcgaatcc ggttacgaaa ttcctttcac cgtaacctca
    16081 atcgcgaacg gcggcagcag cacgaacacg gaactcaaaa aagccgtctt ggggctgacc
    16141 gttacgccga acatcacgcc cgacggccaa atcattatga ccgtcaaaat caacaaggac
    16201 tcgcctgcgc aatgtgcctc cggtaatcag acgatcctgt gtatttcgac caaaaacctg
    16261 aatacgcagg ctatggttga aaacggcggc acattgattg tcggcggtat ttatgaagaa
    16321 gacaacggca atacgctgac caaagtcccc ctgttgggcg acatccccgt tatcggcaac
    16381 ctctttaaaa cacgcgggaa aaaaaccgac cgccgcgaac tgctgatttt cattaccccg
    16441 aggattatgg gtacggccgg caacagcctg cgctattgat gcgtcaaaat aagggcatat
    16501 gttttacggc atatgccctt tctttatgct ttttgccgcg accgaaatgc cgtcattccc
    16561 gcgcaggcgg gaatccagtc cgttcagttt cggtcatttc tgataaattc ctgttgcttt
    16621 tcatttctgg attcccactt ttgtgggaat gacggcggaa ggggtaaatc ctcgcaatcc
    16681 aaagcctcgt catttccaca aaaaacagca acccggaaca gcaacttaaa accccgtcat
    16741 tcccgcgcag gcaggaatcc aacttgtccg gttccggttg tttttcgtct cgtaactttt
    16801 gagccgtcat tcccgcgcag gcgggaatct aggtctgtcg gttcaggaac ttatcggata
    16861 aaacggtttc tccaaccctg cgttctagat tcccactttc gtgggaatga cgggatatgg
    16921 gtttccgtgc ggacgtgttc ggatttccgc ctgcgcggga atgacggcga cagatgccca
    16981 acggtct
//
LOCUS       DBBZXU010000036        16850 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.036, whole genome shotgun sequence.
ACCESSION   DBBZXU010000036 DBBZXU010000000
VERSION     DBBZXU010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16850)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16850)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16850
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.036"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="ACJJDE_001010"
     CDS             complement(68..1624)
                     /gene="dnaA"
                     /locus_tag="ACJJDE_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003688 - DNA replication origin binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA];
                     GO_process: GO:0006275 - regulation of DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HGG7540953.1"
                     /translation="MTLAEFWPLCLRRLHDMLPQGQFAQWIAPLTVGEEGGVWVVYGK
                     NQFACNMLKSQFAGKIEAVREELAAGRSAFVFKPGEGVRYEMAAVEGAVEPAEPSLHA
                     GSEEMPVQEVLLDELPSEEPVKPAASKTAADILAERMKNLPHEPRHTAEPASRPESEV
                     LAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAESPGQSYNPF
                     FLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQY
                     KQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKS
                     RFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNR
                     VGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKR
                     TRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQD
                     YEKLLILIQN"
     gene            1917..2051
                     /gene="rpmH"
                     /locus_tag="ACJJDE_001011"
     CDS             1917..2051
                     /gene="rpmH"
                     /locus_tag="ACJJDE_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003816025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HGG7540954.1"
                     /translation="MKRTYQPSVTKRKRTHGFLVRSKTRGGRAVLAARRAKGRKRLAV
                     "
     gene            2054..2419
                     /gene="rnpA"
                     /locus_tag="ACJJDE_001012"
     CDS             2054..2419
                     /gene="rnpA"
                     /locus_tag="ACJJDE_001012"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HGG7540955.1"
                     /translation="MDYRFGRQYRLLKTDDFSSVFAFRNRRSRDLLQVSRSNGNGLDH
                     PRIGLVVGKKTAKRANERNYMKRVIRDWFRLNKNRLPPQDFVVRVRRKFDRATAKQAR
                     AELAQLMFGNPATGCRKQA"
     gene            2485..2706
                     /gene="yidD"
                     /locus_tag="ACJJDE_001013"
     CDS             2485..2706
                     /gene="yidD"
                     /locus_tag="ACJJDE_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HGG7540956.1"
                     /translation="MNFLLSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKK
                     YGAFKGGRLAIKRIARCHPFGGHGHDPVP"
     gene            2878..4515
                     /gene="yidC"
                     /locus_tag="ACJJDE_001014"
     CDS             2878..4515
                     /gene="yidC"
                     /locus_tag="ACJJDE_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HGG7540957.1"
                     /translation="MDFKRLTAFFAIALVIMIGWEKMFPTPKPVPAPQQTAQQQAVTA
                     SAEAALAPATPITVTTDTVQAVIDEKSGDLRRLTLLKYKATGDENKPFILFGDGKEYT
                     YVAQSELLDAQGNNILKGIGFSAPKKQYSLEGDKVEVRLSAPETRGLKIDKVYTFTKG
                     SYLVNVRFDIANGSGQTANLSADYRIVRDHSEPEGQGYFTHSYVGPVVYTPEGNFQKV
                     SFSDLDDDAKSGKSEAEYIRKTPTGWLGMIEHHFMSTWILQPKGGQSVCAAGDCRIDI
                     KRRNDKLYSTSVSVPLAAIQNGAKSEASINLYAGPQTTSVIANIADNLQLAKDYGKVH
                     WFASPLFWLLNQLHNIIGNWGWAIIVLTIIVKAVLYPLTNASYRSMAKMRAAAPKLQA
                     IKEKYGDDRMAQQQAMMQLYTDEKINPLGGCLPMLLQIPVFIGLYWALFASVELRQAP
                     WLGWITDLSRADPYYILPIIMAATMFAQTYLNPPPTDPMQAKMMKIMPLVFSVMFFFF
                     PAGLVLYWVVNNLLTIAQQWHINRSIEKQRAQGEVVS"
     gene            complement(4596..5309)
                     /locus_tag="ACJJDE_001015"
     CDS             complement(4596..5309)
                     /locus_tag="ACJJDE_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HGG7540958.1"
                     /translation="MMSPVLYLIPTPLGTPDTPCLLPHEQQAIVGLTDFVVEAEKTAR
                     AHLKHLGVTMPIRELNLQTLNEHTDLKTLLELLKPLQEGRSMGIVSEAGCPAVADPGA
                     NLVALAHKHGFEVRPLVGPSSLLLALMASGANGQSFAFKGYLPSEKNERIQSLKALEQ
                     RSRQQNETQLFIETPYRNDVLLADAVENLHSETRLCTATDLTLPTQEIISQTVVQWRK
                     RKEMPNLKKRPTIFVMYAG"
     gene            complement(5368..5958)
                     /locus_tag="ACJJDE_001016"
     CDS             complement(5368..5958)
                     /locus_tag="ACJJDE_001016"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009117 - nucleotide metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase"
                     /protein_id="HGG7540959.1"
                     /translation="MGLELPLILGTSSVFRREQMERLGIAFQAASPDFDETPMLGESA
                     PQTALRLAEGKARSLTGRFPKALIVGADQVAWCDGRQWGKPMNLANAQKMLMHLSGRE
                     IEFYSAVVLLNTVTGRMQRHIDKTVVVMRQLDELHILRYLEREPDAVYCSCALKSEDL
                     GALLIERIESTDPNALIGLPVFRLVDFLKNEGVDVL"
     gene            6106..6609
                     /locus_tag="ACJJDE_001017"
     CDS             6106..6609
                     /locus_tag="ACJJDE_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003776445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HGG7540960.1"
                     /translation="MSDPNLIDPEIFAAEGQNLQGSFLLEELDERVSSHDYPADRQTK
                     ISFTLTGGRDRLQRLFLDLNVKADMPLICQRCIKPMPFMLDESSRIVLFSNEESLDES
                     MLADEELEGILIEKELDVRTLVEDQILMSLPFSPRHEDCGDNGTLEEVNRDKPNPFAV
                     LAGLKSN"
     gene            6643..6822
                     /gene="rpmF"
                     /locus_tag="ACJJDE_001018"
     CDS             6643..6822
                     /gene="rpmF"
                     /locus_tag="ACJJDE_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011765354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HGG7540961.1"
                     /translation="MAVQQNKKSPSKRGMHRSHDALTAPALSVDSTTGEVHRPHHISP
                     NGMYRGRKVVKAKGE"
     gene            6997..7524
                     /locus_tag="ACJJDE_001019"
     CDS             6997..7524
                     /locus_tag="ACJJDE_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HGG7540962.1"
                     /translation="MKQKIWYTYDDIHRVIKALAEKIRNADIKYDAMIAIGGGGFIPA
                     RMLRCFLEIPIYAVTTAYYDSDNEGQVTEEVKKVQWLDPVPEALRGKNVLVVDEVDDS
                     RVTMEFCLTELLKEDFGTIGVAVLHEKIKAKAGKIPEGIPYFSGITVEDWWINYPWDA
                     LDIDEHNRLAEAGRG"
     gene            7612..8667
                     /gene="plsX"
                     /locus_tag="ACJJDE_001020"
     CDS             7612..8667
                     /gene="plsX"
                     /locus_tag="ACJJDE_001020"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HGG7540963.1"
                     /translation="MITLAVDAMGGDQGLAVTVPGATAFLQAHPDVRLIMTGDETQLR
                     QALTAAGAPMERIDICHTTQVVGMDESPQSALKNKKDSSMRVAINQVKEGKAQAAVSA
                     GNTGALMATARFVLKTIPGIERPAIAKFLPSDTDHVTLALDLGANVDCTPEQLAQFAV
                     IGSELVHALHPQKGQPRVGLVNVGTEDIKGTDTVKQTYKLLQNSKLNFIGNIESNGIL
                     YGEADVVVADGFVGNVMLKTIEGAVKFMSGAIRREFQSNLFNKLAAVAALPALKGLKN
                     KLDPRKFNGAILLGLRGIVIKSHGGTDETGFRYALEEAYHEAKSAGLSKIEQGVAEQL
                     AALETAKAVQNENVGGL"
     gene            8803..9054
                     /locus_tag="ACJJDE_001021"
     CDS             8803..9054
                     /locus_tag="ACJJDE_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafI family immunity protein"
                     /protein_id="HGG7540964.1"
                     /translation="MKTLEKRMKALDKRMMKFGKSLEGRLDARLIESALDYIHYSERF
                     LAFEILCTYIEDFDVRLTEQESREISFINKEFEIESTSD"
     gene            9081..9497
                     /locus_tag="ACJJDE_001022"
     CDS             9081..9497
                     /locus_tag="ACJJDE_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540965.1"
                     /translation="MKTSTVVFGGFFMADNRERIQIPVLENPGIREINHFFSVSNFEK
                     KAGVLVFRIIPEPKFGNTELTIYFEEGCYLPMIQTILEDGDIEVKNLKTENYSGNTME
                     IWGDFYPIEHISKNISTIQNIISEFMIQKQTPAPII"
     gene            9517..9720
                     /locus_tag="ACJJDE_001023"
     CDS             9517..9720
                     /locus_tag="ACJJDE_001023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7540966.1"
                     /translation="MPSEACLVFRRHFLRLKQRIGNPALPIHGNLHLKTICIPNHTPI
                     PVSVICTLSVLGNHRFFAYNSRI"
     gene            9747..10709
                     /locus_tag="ACJJDE_001024"
     CDS             9747..10709
                     /locus_tag="ACJJDE_001024"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HGG7540967.1"
                     /translation="MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRH
                     IAAENEKTSDLAAEAARRALDAAGLDSGEIDLIIVATATPDMQFPSTATIVQQKLGIT
                     NGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFG
                     DGAGAVVLSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKF
                     AVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHG
                     NTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY"
     gene            10756..11163
                     /locus_tag="ACJJDE_001025"
     CDS             10756..11163
                     /locus_tag="ACJJDE_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HGG7540968.1"
                     /translation="MKRQAFFKLMACAAFLSAVSLRLPVLGACYAILSLYAFALYGID
                     KRRAVRGKRRIPEHRLLLPALFGGWAGAYLGSRIFRHKTAKKRFVVLFRLTVSGNVLA
                     TLILIYSGLNLNQYGVASPCRTICTVCGFVALS"
     gene            11257..12183
                     /gene="fabD"
                     /locus_tag="ACJJDE_001026"
     CDS             11257..12183
                     /gene="fabD"
                     /locus_tag="ACJJDE_001026"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HGG7540969.1"
                     /translation="MSFAFFFPGQGSQSLGMMNGFAEQAIVKATFDEASAILGQDLWA
                     MINGSDAEIIGQTVNTQPIMLAAGVAVYRAYLEAGGKTPAAVAGHSLGEYTALVAAGA
                     LNFADAVKLVRLRAELMQSAVPQGVGAMAAILGLEDEQVRQICTESAQDEVVEAVNFN
                     SPGQVVIAGNAAAVGRAMTAAKEAGAKRALPLPVSVPSHCSLMKPAADKLAEALKTVE
                     IKQPQIRVIHNADVAAYDDADKIKDALVRQLYSPVRWTETVNALVSDGIAESAECGPG
                     KVLAGLAKRINKTAACSALTDAGQVAAFIEAH"
     gene            12322..14187
                     /gene="msbA"
                     /locus_tag="ACJJDE_001027"
     CDS             12322..14187
                     /gene="msbA"
                     /locus_tag="ACJJDE_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005319 - lipid transporter activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006869 - lipid transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A export permease/ATP-binding protein
                     MsbA"
                     /protein_id="HGG7540970.1"
                     /translation="MIEKLTFGLFKKEDARSFMRLMAYVRPYKIRIIAALIAIFGVAA
                     TESYLAAFIAPLINHGFSAPAAPPELSAAAGIISTLQNWREQFTYMVWGTENKIWTVP
                     LFLIILVVIRGICRFTSTYLMTWVSVMTISKIRKDMFAKMLTLSSRYHQETPSGTVLM
                     NMLNLTEQSVSNASDIFTVLTRDTMIVTGLTIVLLYLNWQLSLIVVLMFPLLSLLSRY
                     YRDRLKHVISDSQKSIGTMNNVIAETHQGHRVVKLFNGQAQAANRFDAVNRTIVRLSK
                     KITQATAAHSPFSELIASIALAVVIFIALWQSQNGYTTIGEFMAFIVAMLQMYAPIKS
                     LANISIPMQTMFLAADGVCAFLDTPPEQDKGTLAPQRVEGRISFRNVDVEYRSDGIKA
                     LDGFNLDIRQGERVALVGRSGSGKSTVVNLLPRFVEPSAGNICIDSIDIADIKLDCLR
                     AQFALVSQDVFLFDDTLFENVRYSRPDAGEAEVLFALQTANLQSLIDSSPLGLHQPIG
                     SNGSNLSGGQRQRVAIARAILKDAPILLLDEATSALDNESERLVQQALERLMENRTGI
                     IVAHRLTTIEGADRIIVMDDGKIIEQGTHEQLMSQNGYYTMLRNISNKDAAVRTA"
     gene            14287..15852
                     /gene="guaA"
                     /locus_tag="ACJJDE_001028"
     CDS             14287..15852
                     /gene="guaA"
                     /locus_tag="ACJJDE_001028"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HGG7540971.1"
                     /translation="MTQDKILILDFGSQVTQLIARRVREAHVYCELHSFDMPLDEIKA
                     FNPKGIILSGGPNSVYESDYQADTGIFDLGIPVLGICYGMQFMAHHLGGEVQPGNQRE
                     FGYAQVKTIDSELTRGIQDGEPNTLDVWMSHGDKVSKLPDGFAVIGDTPSCPIAMMEN
                     AEKQFYGIQFHPEVTHTKQGRALLNRFVLDICGAQPSWTMPNYIEEAVAKIREQVGSD
                     EVILGLSGGVDSSVAAALIHRAIGDQLTCVFVDHGLLRLNEGKMVMDMFARNLGVKVI
                     HVDAEGQFMAKLAGVTDPEKKRKIIGAEFIEVFDAEEKKLTNAKWLAQGTIYPDVIES
                     AGAKTKKAHAIKSHHNVGGLPENMKLKLLEPLRDLFKDEVRELGVALGLPREMVYRHP
                     FPGPGLGVRILGEVKKEYADLLRQADDIFIQELRNTTDENGTSWYDLTSQAFAVFLPV
                     KSVGVMGDGRTYDYVVALRAVITSDFMTAHWAELPYSLLGRVSNRIINEVKGINRVVY
                     DVSGKPPATIEWE"
     gene            15914..16660
                     /gene="fabG"
                     /locus_tag="ACJJDE_001029"
     CDS             15914..16660
                     /gene="fabG"
                     /locus_tag="ACJJDE_001029"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HGG7540972.1"
                     /translation="MSTQDLSGKIALVTGASRGIGAAIADTLAAAGAKVIGTATSESG
                     AAAISERLAQWGGEGRVLNSAEPETVENLIADIEKTFGKLDILVNNAGITRDNLLMRM
                     KEEEWDDIMQVNLKSVFRASKAVLRGMMKQRSGRIINITSVVGVMGNAGQTNYAAAKA
                     GLIGFSKSMVREVGSRGITVNCVAPGFIDTDMTRALPEETRQTFTAQTALGRFGDAQD
                     IADAVLFLASDQAKYITGQTLHVNGGMLMP"
BASE COUNT         4264 a         5133 c         3955 g         3498 t
ORIGIN      
        1 ttaatccgct atatctttac ccttcggacg gcatgggcaa tatcatgtcg tctgaaaacg
       61 ttttccatca gttttgaatc agaatcagca gcttttcata atcctgagcc aattccggat
      121 cttcttcgcg cagtttcgcc actgccctga tgccgtgcat aacggtcgta tggtcgcgtc
      181 cgccgaacga atcgccgata gacggcaggc tcaaagtggt cagttctttg gtcaggctca
      241 tcgccacctg gcgcggacgg gcaatgtttc gtgtccgttt cttaccgagc acatcgctga
      301 ttttgatgcg gtaatatttc gcaacggcat caataataat atcggcggtg atgactttgt
      361 gcttctcggc aataatgtcc tgcaaagcag tacgcgccaa atcgatgtcg atgacgggac
      421 ggttcataaa gcggctgctc gctccgacgc ggttgaacgc gccttcaagc tcacgcacgt
      481 tggaacggat cagattggca atgaacagcg cggcttcgtc ttcaatactg atgcccgccg
      541 cttccgcctt tttctgcaaa atggcgatac gcatttccaa ttcgggcggc tcgagttcca
      601 aagtcagtcc ccatgaaaaa cgggatttga ggcggtcgtc cataccttcg attttggcgg
      661 gtaaaacatc gcaagtgagg atgagctgtt ttttctcgtt atggaaatga ttgtacagat
      721 agaagaattc ctccatcgta cggtctttgc ctttgatgaa ctggatgtcg tcgataatca
      781 gcaggtcgta ttgcttgtat tgctgcttga acacgtcgta ggtattgttg cgaaccgcct
      841 tcataaagct gcggatatag tcgtccgaat gcatatagcg cactttggca tcgggacggt
      901 ttttcaaaag ctcgttgccg accgcctgta ccaggtgggt tttgcccaaa cccgtgctgc
      961 cgtacaggaa aaacgggttg tagctctgcc ccgggctttc cgcaatcgcc tgcgccgcag
     1021 ccgccgcaag gcggttgccc ttgccttcga ccaatgtgtc gaacgtatag tccggcgaca
     1081 gattggtctg ctcgtaacgt gcctcttccg catcgcgctg cgcatccgtc cgcgctttcg
     1141 caagcacctc cgattccgga cgggaagcag gttcggcagt atggcgcggc tcatgcggga
     1201 ggtttttcat acgttccgcc agaatatccg ccgccgtttt cgacgcagcg ggtttgacag
     1261 gctcttcaga cggcagctcg tccaacagaa cctcctgcac aggcatctcc tccgaccccg
     1321 cgtgcaagga cggctcggca ggttcgacag caccttcaac cgccgccatc tcataacgca
     1381 cgccttctcc tggtttgaat acgaaggcgg aacggccagc agccaactct tccctcaccg
     1441 cttctatttt cccggcaaac tggctcttaa gcatattgca ggcaaactgg ttcttgccgt
     1501 acaccaccca tacgccaccc tcctcaccga cggtaagggg cgcaatccat tgcgcaaact
     1561 gcccttgagg caacatatcg tgaagacggc ggaggcacag cggccaaaac tctgctaatg
     1621 tcatggataa gctcgaatcg gtaaaaatga aatcgaaaac aaagaaaata taatattttc
     1681 aaaaagaaaa caaatctgtt gaacacacat cggttcaaaa tgcagcgaac cgaattatac
     1741 cgactcgccg atattttatc cacaacccgt gcaaaattta tccacagaaa ggcggcagaa
     1801 atccgcaggc aatcgggcaa tcctcctgca aagtttctat attgattgac aaaagcggca
     1861 aattggagtg taattcacgg tttaattatc tacccattct atttttagga aacatcatga
     1921 aacgcactta tcaaccttcc gttaccaaac gcaaacgcac ccacggcttc ctggtgcgct
     1981 ccaaaacacg cggcggccgc gcagtattgg ctgcacgccg cgccaaaggc cgcaaacgcc
     2041 tggcggtata attttggact accgcttcgg aaggcagtac cgcttgttga aaacggatga
     2101 tttttcatcc gtttttgcat tcagaaaccg ccgcagccgc gacctgctgc aagtttcgcg
     2161 ttcaaacggc aacgggctgg accatccccg catcggtctg gtggtcggca aaaaaaccgc
     2221 caaacgcgcc aacgaacgaa attatatgaa gcgcgtcatc cgcgactggt tcagattgaa
     2281 caaaaaccgg ctgccgccgc aggatttcgt cgtgcgcgtc cgccgtaaat tcgacagggc
     2341 taccgcaaaa caggcaaggg cggaactggc acaactcatg ttcggcaacc ccgcaaccgg
     2401 atgcaggaaa caggcatgat cagaacggta ctctgcaggc aaggttcaga cggcaacggg
     2461 tttcccatac taaggaacat cccgatgaac ttcctattgt ccaaactcct gctgggactg
     2521 atacggttct accaatattg catcagcccg ctgattccgc cgcgctgccg ttatacgccg
     2581 acctgttcgc aatacgcggt cgaagcggtc aaaaaatacg gcgcattcaa aggcggccgg
     2641 ctcgccatca agcgcattgc acgctgccac cctttcggcg gacacggaca cgaccccgtt
     2701 ccctgacccg acgcaatatt caaattgcac gctttccttt tatttcccat cggtttctat
     2761 ataatgccgt ctgaactttc gggctggcgg cacgaccgtc gggtatgaag cccgccctta
     2821 ttccccgtct atcggaacac gcaacctgcg gcatttccga ccattcagga aactcttatg
     2881 gattttaaaa gactcacggc gtttttcgcc atcgcactgg tgattatgat cggatgggaa
     2941 aagatgttcc ccactccgaa gcccgtcccc gcgccccaac agacggcaca acaacaggcc
     3001 gtaaccgctt ccgccgaagc cgcgctcgcg cccgcaacgc cgattaccgt aacgaccgac
     3061 acggttcaag ccgtcattga tgaaaaaagc ggcgacctgc gccggctgac cctgctcaaa
     3121 tacaaagcaa ccggcgacga aaataaaccg ttcatcctgt ttggcgacgg caaagaatac
     3181 acctacgtcg cccaatccga acttttggac gcgcagggca acaacattct aaaaggcatc
     3241 ggctttagcg caccgaaaaa acagtacagc ttggaaggcg acaaagttga agtccgcctg
     3301 agcgcacctg aaacacgcgg tctgaaaatc gacaaagttt atactttcac caaaggcagc
     3361 tatctggtca acgtccgctt cgacatcgcc aacggcagcg gtcaaaccgc caacctgagc
     3421 gcggactacc gcatcgtccg cgaccacagc gaacccgagg gtcaaggcta ctttacccac
     3481 tcttacgtcg gccctgttgt ttatacccct gaaggcaact tccaaaaagt cagcttctcc
     3541 gacttggacg acgatgccaa atccggcaaa tccgaggccg aatacatccg caaaaccccg
     3601 accggctggc tcggcatgat tgaacaccac ttcatgtcca cctggatcct ccaacccaaa
     3661 ggcggacaaa gcgtttgcgc cgctggcgac tgccgtatcg acatcaaacg ccgcaacgac
     3721 aagctgtaca gcaccagcgt cagcgtgcct ttagccgcta tccaaaacgg tgcgaaatcc
     3781 gaagcctcca tcaacctcta cgccggccca cagaccacat ccgttatcgc aaacatcgcc
     3841 gacaacctgc aactggccaa agactacggc aaagtacact ggttcgcctc ccccctcttt
     3901 tggcttttga accaactgca caacatcatc ggcaactggg gctgggcgat tatcgtttta
     3961 accatcatcg tcaaagccgt actgtatcca ttgaccaacg cctcttaccg ttcgatggcg
     4021 aaaatgcgtg ccgccgcgcc caaactgcaa gccatcaaag agaaatacgg cgacgaccgt
     4081 atggcgcagc aacaagccat gatgcagctt tacacagacg agaaaatcaa cccgctgggc
     4141 ggctgcctgc ctatgctgtt gcaaatcccc gtcttcatcg gattgtattg ggcattgttc
     4201 gcctccgtag aattgcgcca ggcaccttgg ctgggttgga ttaccgacct cagccgcgcc
     4261 gacccctact acatcctgcc catcattatg gcggcaacga tgttcgccca aacctatctg
     4321 aacccgccgc cgaccgaccc gatgcaggcg aaaatgatga aaatcatgcc tttggttttc
     4381 tccgtcatgt tcttcttctt ccctgccggt ctggtattgt actgggtggt caacaacctc
     4441 ctgaccatcg cccagcaatg gcacatcaac cgcagcatcg aaaaacaacg cgcccaaggc
     4501 gaagtcgttt cctaaatgcc gcagcatgaa aaatgccgtc tgaaacctgt tcagacggca
     4561 tttttattgt tcacccccta tcggggcgga aatcttcaac ctgcatacat cacaaaaatc
     4621 gtcgggcgtt ttttcagatt gggcatttct tttctttttc gccactgcac aaccgtctgg
     4681 ctgatgattt cctgagtcgg caacgtcaaa tccgtagccg tacacaaacg cgtttcagaa
     4741 tgcaggtttt ccaccgcatc cgccaacaac acatcgttgc gatacggcgt ttcgataaac
     4801 agctgcgttt cattctgctg gcgcgaacgt tgctccaaag ccttcaaact ctgaatccgc
     4861 tcgttttttt cagacggcag ataaccctta aacgcaaaac tctgcccgtt cgcacccgaa
     4921 gccatcaaag ccagcagcag gctggaaggc ccgaccagcg gacgcacttc aaaaccgtgt
     4981 ttatgcgcca aagccaccag attcgcaccc ggatcggcaa cagccgggca acccgcctcg
     5041 ctgacaatgc ccatactgcg cccttcttgc aaaggtttca gcaattccag caaagtcttc
     5101 aaatccgtgt gttcgttcag cgtttgcaaa ttcagttcgc ggataggcat tgtcacgccc
     5161 aaatgtttca aatgcgcgcg cgccgttttt tccgcttcca cgacaaaatc cgtcagcccg
     5221 acaatcgcct gttgttcatg cggcaacagg cacggcgtat cgggcgtacc caaaggcgta
     5281 ggaatcaaat acaaaacagg agacatcatt ccctcactca tcggttaaaa atgccgtctg
     5341 aacccttcag acggcataaa cgggcagtta caaaacatcc acgccctcat ttttcaaaaa
     5401 atcgaccaga cggaaaaccg gcaaaccgat taaagcattc ggatcggtac tctcaatcct
     5461 ttcaatcaac aatgcaccca aatcctcact cttcagcgca cacgaacaat aaaccgcatc
     5521 aggctcgcgc tccaaatagc ggaggatgtg caactcgtcc aactgcctca tcacgaccac
     5581 cgtcttatcg atatgccgct gcatcctgcc cgtaaccgta tttagcagaa cgaccgcgct
     5641 gtaaaactca atctccctgc cgctcaaatg catcaacatc ttttgcgcat tagcaaggtt
     5701 catcggcttg ccccactgcc tgccgtcgca ccacgccacc tggtccgcac cgacaatcaa
     5761 cgcctttggg aaacgcccgg tcaacgaccg cgccttaccc tcggcaaggc gcaatgccgt
     5821 ctgaggggcg gattccccca acatcggcgt ttcgtcaaaa tcgggggacg ccgcctgaaa
     5881 ggcaatgccg agcctttcca tctgttcgcg gcggaaaacc gaactcgtac ccaaaatcaa
     5941 aggcagttcc aaacccatcc catcctcctt accgttgaaa acacgcccga aggggcggta
     6001 aaatccagcc atgcgccgaa acacggatac ccgccttcgg cgtaccgcaa catttttctt
     6061 aaaaatattg acgttagaac atctaaatta tatcataccc cgtttatgtc agaccctaat
     6121 ttgattgacc cggaaatttt cgccgccgaa gggcagaatc tgcaaggcag ttttctgctg
     6181 gaagaattgg atgaacgcgt cagttcgcac gattatcccg ccgacaggca gaccaaaata
     6241 tcgtttacac tgaccggcgg tcgcgaccgg ctgcaacgcc tgttcctcga cctgaacgtc
     6301 aaagccgata tgcccctgat ttgccagaga tgtatcaaac ccatgccgtt catgcttgat
     6361 gaaagcagcc gtatcgtcct gttttccaac gaagagtcct tggacgaatc catgcttgcc
     6421 gacgaagaac tcgaaggcat actgattgaa aaagaactcg acgtgcgcac attggtagaa
     6481 gaccaaatcc tgatgtccct gcccttttcg ccgcgacacg aagactgcgg cgacaatggg
     6541 acactggaag aagtcaatcg ggacaaaccc aacccctttg ctgttttggc aggtttgaaa
     6601 agcaattgat taggacacag tttatttatc taggagcttg aaatggccgt tcaacaaaac
     6661 aaaaaatccc cttccaaacg cggtatgcac cgttcgcacg acgcgctgac cgcgcctgca
     6721 ctgtctgtcg acagcacaac cggcgaagta caccgcccgc accacatctc ccccaacggt
     6781 atgtaccgcg gccgcaaagt ggtcaaagcc aaaggcgaat aatccctatt cgactgactg
     6841 aaaaagccag aacattgcca tgcaattact ggcttttttt gcattggacg caccatccgt
     6901 ccaaactttc gccatacgtc aacacacagg ggcaaagcgt tccgtataat accccgtgaa
     6961 aatattccaa aagccccaac caccaaggaa attccgatga aacagaaaat ctggtacacc
     7021 tacgatgaca tccaccgcgt catcaaagca ttggcagaaa aaatccggaa cgccgacatc
     7081 aaatacgatg ccatgattgc catcggcggc ggcggcttta ttccggcacg tatgctgcgc
     7141 tgttttctgg aaattccgat ttatgccgta accaccgcct attacgacag cgacaacgaa
     7201 ggacaggtta cagaagaagt caaaaaagtc caatggctcg accccgttcc cgaagccctg
     7261 cggggcaaaa acgtccttgt tgtcgatgaa gtggacgaca gccgcgtaac catggaattt
     7321 tgcctgacag agctgctcaa agaagacttc ggtacgatcg gcgtcgccgt actgcacgaa
     7381 aaaatcaaag ccaaagcagg caaaatcccc gaaggcattc cctatttcag cggcatcacc
     7441 gtagaagact ggtggatcaa ctatccgtgg gacgcactcg acatcgacga acacaaccgc
     7501 cttgccgagg ccggccgagg ctgacccttt cagacggcat attttccgaa ccgatgccgt
     7561 ctgaagcccg cacgacccct gccgcagacc gaaaacctac cggagaaccc tatgattaca
     7621 cttgccgtag atgccatggg cggcgaccaa ggacttgccg ttaccgtacc cggcgcaacc
     7681 gcattcctcc aagcacaccc cgatgtccgc ctgattatga ccggcgacga aacgcaactg
     7741 cgccaagccc tgaccgcggc aggcgcaccg atggaacgca tcgacatctg ccataccacc
     7801 caagttgtcg gcatggatga atcccctcag tccgccctaa agaacaaaaa agactcctcc
     7861 atgcgcgttg ccatcaacca agttaaagaa ggcaaagccc aagccgccgt atccgcaggc
     7921 aacacgggcg cactcatggc aaccgcacgt ttcgtcctca agaccatacc cggtatcgaa
     7981 cgccccgcca tcgccaaatt cctcccgtcc gacaccgacc atgttaccct cgccctcgac
     8041 cttggcgcga acgtcgactg cacgcccgaa cagctcgccc aatttgccgt tatcggcagc
     8101 gaactcgtcc acgcactcca tcctcaaaaa ggacagccgc gcgtcgggct ggtcaacgtc
     8161 ggcacggaag acatcaaagg tacggacacc gtcaaacaaa cctacaaact gctgcaaaac
     8221 agcaaactca actttatcgg caacatcgaa agcaacggca tcctgtacgg cgaagcagat
     8281 gtcgtcgtcg ccgacggctt tgtcggcaac gtcatgctca aaaccatcga aggcgcggtc
     8341 aaattcatga gcggagccat ccgccgcgaa ttccaaagca acctgttcaa caaacttgcc
     8401 gccgttgccg ccctacccgc cctcaaaggg ctgaaaaaca aactcgatcc gcgcaaattc
     8461 aacggggcca tcctgctcgg gctgcgcggc atcgtcatca aaagccacgg cggcacagac
     8521 gaaaccggtt tccgctacgc actcgaagaa gcctaccacg aagccaagtc cgccggcctt
     8581 tccaaaatcg aacaaggcgt tgccgaacaa ctcgccgcac tcgaaactgc caaagccgtc
     8641 caaaacgaaa atgtcggcgg tctgtaacac acacgatgcc gtctgaacgc ccccgcccct
     8701 ttcagacggc atccgcccgc cccgaacctg cgggcgcgga cggcgatgca cctgtccggc
     8761 acttcccaaa tacttccctg taaaataagg aatatttgaa aaatgaagac attagaaaaa
     8821 cggatgaaag ctctagacaa acggatgatg aagttcggaa aatcccttga aggcaggctt
     8881 gatgcccgtc tgattgaatc cgcattggat tatattcatt attcggaacg ttttttggct
     8941 tttgaaatcc tgtgtactta tatcgaagat ttcgatgtcc ggctgacgga acaagaatcc
     9001 cgggaaattt cttttatcaa caaggaattt gagatagaaa gcacgtccga ttaaccaata
     9061 aagccaatga tttgataaga atgaaaacat cgacggtcgt ttttggcgga ttttttatgg
     9121 cagacaacag ggagcgaatc caaatccccg ttttggaaaa tcctggcatt agggaaatca
     9181 atcacttttt ttccgtatca aattttgaga aaaaagccgg cgtccttgtt ttcagaatta
     9241 ttcctgaacc caaatttggc aataccgaat taactatcta ttttgaagaa ggatgttatt
     9301 tgccaatgat tcaaacaatt ttagaagatg gggatattga agtcaaaaac cttaaaacag
     9361 aaaattatag tggaaataca atggaaattt ggggagactt ctaccctatt gagcatatct
     9421 ctaaaaatat ttctacaatt caaaatataa tttctgaatt tatgatacaa aaacaaacac
     9481 cggcaccaat aatttgatgg aaaaccaaca atcaaaatgc cgtctgaagc atgtttggtt
     9541 ttcagacggc atttccttcg cttaaaacag cgtatcggca accccgccct gcctatccac
     9601 ggcaatctgc atctgaaaac catctgtatc ccaaaccaca cccccatccc tgtttccgtc
     9661 atttgcaccc tgtccgtatt gggcaatcat cggtttttcg cttacaatag ccgaatctga
     9721 accaactctc taaaaaggcc gttcccatgc agtatgcaaa aatttccggc acgggcagct
     9781 atcttcctgc caaccgcgtc agcaatgacg accttgccca aaaggtagat acctctgacg
     9841 agtggattac cgcgcgcacg ggcatcaagt tccgccatat tgcagccgaa aatgagaaaa
     9901 ccagcgatct tgccgccgaa gcagcccgcc gcgcgctgga tgcagccgga ttagacagcg
     9961 gcgaaatcga tttgattatc gtggcgacgg caacgccgga tatgcagttt ccttctaccg
    10021 ccaccatcgt gcagcaaaaa ttgggcatca ccaacggctg tcccgcgttt gacgtacagg
    10081 cggtgtgcgc cggctttatg tacgcgctga ccacggcaaa cgcctacatt aaaagtggca
    10141 tggcgaaaaa cgcgctggtc atcggcgcgg aaaccttcag ccgcatcgtc gattggaacg
    10201 accgcacaac ctgcgtattg ttcggcgacg gcgcgggcgc ggtggtttta agcgcgtcgg
    10261 acacgccggg catcatccac agcaaactca aggccgacgg caattatctg aaactcttaa
    10321 acgtccccgg gcaaatcgcc tgcggcaaag tttccggttc gccgtacatt tcgatggacg
    10381 gtcccggcgt gttcaagttt gccgtcaaaa tgctgtccaa aatcgccgat gacgttatcg
    10441 aagaagccgg ttataccgcc gctcaaatcg actggatcgt gccgcatcag gcaaaccgcc
    10501 gcattatcga atcgaccgcg aaacatttag gtttgagtat ggacaaagtc gtcctgaccg
    10561 tccaagacca cggcaacaca tccgccgcat cgattccgct ggctttggat acgggcatcc
    10621 gcagcggaca aatcaaacgc ggtcaaaacc tgctgctcga aggcatcggc ggcggtttcg
    10681 cgtggggcgc ggtgctgttg caatattgaa cccgatgccg tctgaaacag gctttcagac
    10741 ggcatttccc atatcatgaa gcggcaggct ttcttcaaac tgatggcgtg tgcggcattt
    10801 ctgtctgccg tttcgctgcg cctccccgta ttgggcgcgt gttacgcaat attgtccctc
    10861 tatgcgtttg cactttacgg catcgacaaa cggcgtgccg tgcggggaaa acgccgcatt
    10921 cccgaacacc gcctgctgct gcctgccttg ttcggcggtt gggcgggcgc atacttgggc
    10981 agcaggatat tcaggcataa aacggcgaaa aagcgttttg ttgtgctgtt ccgtctgact
    11041 gtttcgggca atgtcctggc gaccctcatc ctgatttata gtggattaaa tttaaaccag
    11101 tacggcgttg cctcgccttg ccgtactatt tgtactgtct gcggcttcgt cgccttgtcc
    11161 tgatttttgt taatccacta tattattttg tcccgcctga atttttcgta aaactcgggc
    11221 agaatacctg attatccaac caaacaaagg aatactatgt cttttgcatt cttctttccc
    11281 ggacaaggct cacaaagcct aggcatgatg aacggctttg ccgagcaagc catcgttaaa
    11341 gccacatttg acgaagcttc cgccatattg gggcaggact tgtgggcgat gattaacggc
    11401 agcgatgccg aaatcatcgg tcaaaccgtc aacacccagc ccattatgct cgccgccggc
    11461 gttgccgttt accgcgccta tttggaagcg ggcggcaaaa cgcctgccgc cgttgccgga
    11521 cacagcctcg gcgaatacac cgcactcgtt gccgccggcg cattgaattt tgccgacgcg
    11581 gtcaaactcg tgcgcctacg cgccgaactg atgcagtccg ccgtaccgca aggcgtgggc
    11641 gcaatggcgg caattttggg tttggaagat gaacaggtaa ggcagatttg caccgaatcc
    11701 gcacaggatg aagtggttga agccgtcaac ttcaactcgc ccggacaagt cgtaattgca
    11761 ggcaatgccg ccgccgtcgg acgcgccatg accgccgcca aagaagccgg tgccaaacgc
    11821 gccctgccgc tgcccgtgtc cgtaccttcc cattgcagcc tcatgaaacc cgccgccgac
    11881 aaactcgccg aagccctcaa aaccgtcgaa atcaagcagc cgcaaatccg cgtcatccac
    11941 aacgccgacg ttgccgccta cgatgatgcc gacaaaatca aagacgcgct cgtccgccag
    12001 ctttacagcc ccgtacgctg gacggaaacc gtcaacgccc ttgtttcaga cggcattgcc
    12061 gaatccgccg aatgcggacc gggcaaagtg ttggcgggct tggcaaaacg catcaacaaa
    12121 accgccgcgt gcagcgcgct gaccgatgcc ggacaggttg ccgcctttat cgaagcgcac
    12181 tgacttcgtt ccgcaaaaag cagcctgccc tcttcaggct gcttttcacg tccgaacggc
    12241 aaacagccgc atatttacgc tataatccat cccgaccaaa ccaccgacag cggctgccgt
    12301 tgcagtttcc gccccaccga tatgatagaa aaactgactt tcggactgtt taaaaaagaa
    12361 gacgcgcgca gctttatgcg cctgatggca tacgtccgcc cctacaaaat ccgcatcatt
    12421 gccgccctga ttgccatttt cggcgttgcc gccaccgaaa gctaccttgc cgccttcatc
    12481 gcccccctga ttaaccacgg cttttccgca cctgccgcgc cgcccgagct gtctgccgcc
    12541 gccggcatca tttccaccct gcaaaactgg cgcgaacagt ttacctatat ggtttggggg
    12601 acggaaaaca aaatctggac cgtcccgctc ttcctcatca tcctcgtcgt catccgtggc
    12661 atctgccgct ttaccagcac ctatctgatg acttgggtct ccgtgatgac catcagcaaa
    12721 atccgcaaag atatgtttgc caaaatgctg accctttcct cccgctacca tcaggaaacg
    12781 ccgtccggca ccgtactgat gaatatgctc aacctgaccg aacagtcggt cagcaacgcc
    12841 agcgacatct tcaccgtcct cacgcgcgac acgatgatcg ttaccggcct gaccatcgtc
    12901 ctgctttacc tcaactggca gctcagcctc atcgtcgtcc tgatgttccc cctgctctcc
    12961 ctgctctcgc gctactaccg cgaccgtctg aaacacgtca tttccgactc gcaaaaaagc
    13021 ataggcacga tgaacaacgt gattgccgaa acccatcagg gacaccgcgt cgtcaagctg
    13081 ttcaacgggc aggcgcaggc ggcaaaccgg ttcgacgcgg tcaaccgcac catcgtccgc
    13141 ctcagcaaaa aaatcacgca ggcaacggcg gcacattccc cgttcagcga actgatcgcc
    13201 tcgatcgccc tcgccgtcgt catcttcatc gccctgtggc aaagccaaaa cggctacacc
    13261 accatcggcg aatttatggc attcatcgtc gcgatgctgc aaatgtacgc ccccatcaaa
    13321 agccttgcca acatcagcat ccctatgcag acgatgttcc tcgccgccga cggtgtatgt
    13381 gcatttctcg acaccccgcc cgaacaggac aaaggcacgc tcgcgccgca gcgtgtcgaa
    13441 gggcgcatca gcttccgcaa cgtcgatgtc gaataccgtt cagacggcat caaagccctc
    13501 gacggcttca acctcgacat cagacaaggc gaacgcgtcg ccctggtcgg acgttccggc
    13561 agcggcaaat ccaccgtcgt caacctgctg ccccgctttg tcgaaccgtc tgccggcaac
    13621 atctgcatag acagtatcga catcgccgac atcaaactcg actgcctgcg cgcccaattc
    13681 gccctcgtct cccaagacgt attcctgttt gacgataccc tttttgaaaa cgtccgatat
    13741 agccgtcccg acgcaggcga agccgaagtc ctgttcgccc tccaaaccgc caacctgcaa
    13801 agcctgattg acagctcccc gctcggactg caccagccca tcggatcgaa cggcagcaac
    13861 ttatccggcg gacagcggca acgcgtcgcc attgcccgcg ccattttgaa agacgcgccg
    13921 atattattat tggacgaagc caccagcgca ttagacaacg aatccgaacg cctcgtccaa
    13981 caagcgctcg aacgcctgat ggaaaaccgc accggcatca tcgtcgccca ccgcctgacc
    14041 accatcgaag gggccgaccg catcatcgtg atggacgacg gcaaaatcat cgaacaaggc
    14101 acacacgaac aactgatgtc ccaaaacggc tactacacaa tgttacgcaa tatctcaaac
    14161 aaagatgccg ccgtccggac ggcataaaca aaatgccgtc cgaaatggta caatcgcccc
    14221 gaccctttca gacggcatca tatccgccga cccatccgat tatcttcaat cactgtaaaa
    14281 cccattatga cccaagacaa aatcctcatc ctcgacttcg gttctcaagt tacccagctg
    14341 attgcccgcc gcgtgcgcga agcccacgtt tactgcgaac tgcattcctt cgatatgcct
    14401 ttggacgaaa tcaaagcctt caaccccaaa ggcatcatcc tctctggcgg ccccaattcc
    14461 gtttacgaat ccgactatca agccgatacc ggtatttttg atttgggcat tccggttttg
    14521 ggcatctgtt acggcatgca gtttatggcg caccacttgg gcggcgaagt gcagcccggc
    14581 aaccagcgcg aattcggtta tgcgcaagtt aaaaccatag acagcgagct gacacgcggc
    14641 attcaagatg gtgagccaaa cacactcgac gtatggatga gccacggcga caaagtgtcc
    14701 aaactgcccg acggtttcgc cgtcatcggc gacacgccgt cctgcccgat tgccatgatg
    14761 gaaaacgccg aaaaacaatt ctacggcatc caattccacc ccgaagttac ccacaccaaa
    14821 caaggccgcg ccctgttgaa ccgctttgtc ttggatattt gcggcgcgca acctagctgg
    14881 acgatgccga actacatcga agaagccgtt gccaaaatcc gcgaacaggt cggcagcgac
    14941 gaagtgattt tgggtttgtc cggcggcgtg gactcttccg tagccgccgc gctgattcac
    15001 cgcgccatcg gcgaccaact gacctgcgtg ttcgtcgatc acggtttgtt gcgcctgaac
    15061 gaaggcaaaa tggtgatgga tatgttcgcc cgcaacttgg gtgtgaaagt gattcacgtc
    15121 gatgccgaag ggcagtttat ggcgaaactc gccggcgtga ccgatccgga gaaaaaacgc
    15181 aaaataatcg gcgcggaatt tatcgaagta tttgatgccg aagagaaaaa actcaccaac
    15241 gccaaatggc tggcgcaagg cacgatttac cctgacgtaa tcgaatccgc aggcgcgaaa
    15301 accaaaaaag cccacgccat caaatcgcac cacaacgtcg gcggcctgcc tgaaaacatg
    15361 aagctcaagc tgcttgagcc gttgcgcgac ttattcaaag acgaagtgcg cgaactcggc
    15421 gtcgctttgg gcttgccgcg cgaaatggtg taccgccatc cgttccccgg tcccggtttg
    15481 ggcgtgcgca tcttgggcga agtgaaaaaa gaatacgccg acttattgcg tcaagcagac
    15541 gatattttca tccaagaatt acgcaatact accgacgaaa acggcacatc ttggtacgac
    15601 ctgaccagcc aagccttcgc cgtcttcctg cccgtaaaat ccgtcggcgt aatgggcgac
    15661 ggacgcactt acgactacgt cgtcgcactg cgcgcagtca tcaccagcga cttcatgacc
    15721 gcacactggg cagaactgcc ttactcactg ctcggacgcg tgtccaaccg catcatcaac
    15781 gaagtcaaag gcatcaaccg cgtggtgtac gatgtcagcg gcaaaccgcc tgccaccatc
    15841 gagtgggaat aaccagcaaa cagggctgca ccgtccggcg cagtctttcg attatcggaa
    15901 aaaaggaaaa aatatgagca cacaagattt aagcggcaaa atcgctttgg taaccggcgc
    15961 atcgcgcggt atcggtgcag caattgccga cacactggcg gcagccggtg ccaaagtcat
    16021 cggtacggcg accagtgaga gcggtgcggc ggcgattagc gagcggttgg cgcaatgggg
    16081 cggcgaaggc cgcgtattaa attccgccga acccgaaacc gtcgaaaacc tgattgccga
    16141 catcgaaaaa acgttcggca aactcgatat tctggtcaac aacgccggca tcacccgcga
    16201 caacctcctg atgcgcatga aagaagaaga gtgggacgac atcatgcagg tcaacctcaa
    16261 atccgtgttc cgcgcttcta aagccgtttt gcgcggtatg atgaaacaac gttccggccg
    16321 catcatcaac atcacatccg tcgtcggcgt gatgggcaat gccggtcaaa ccaactatgc
    16381 cgcggcaaaa gcaggcttaa tcggtttctc caaatccatg gtgcgcgaag tcggcagccg
    16441 gggcattacc gtcaactgcg tcgcccctgg ctttatcgat accgacatga cacgcgccct
    16501 gccggaagaa acccgccaaa cctttaccgc ccaaaccgcc ttgggcagat tcggcgacgc
    16561 gcaagacatc gccgatgcgg ttctgttcct cgcttccgac caagcaaaat acatcaccgg
    16621 ccaaacgctg cacgtcaacg gcggtatgct gatgccctga cgggcagccg taccgacaat
    16681 gccgtctgaa gccctttcag acggcatttg cattctcagg caaaatgaac acacgccaca
    16741 ccccgccctg cccctgcgga tcaggcacaa gctgagacct ttgcaaaact cctttccctc
    16801 ccgacagccg aaacccaaac acaggttttc ggctgttttc gccccaaata
//
LOCUS       DBBZXU010000037        16543 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.037, whole genome shotgun sequence.
ACCESSION   DBBZXU010000037 DBBZXU010000000
VERSION     DBBZXU010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16543
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.037"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            210..1274
                     /locus_tag="ACJJDE_001030"
     CDS             210..1274
                     /locus_tag="ACJJDE_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-butanediol dehydrogenase"
                     /protein_id="HGG7540973.1"
                     /translation="MKAARFYDKGDIRIEDIPEPTVAPGTVGINVAWCGICGTDLHEF
                     MEGPIFIPPCGHPHPISGESAPVTMGHEFSGVVYAVGEGVDDIKVGQHVVVEPYIIRD
                     DVPTGEGSNYHLSKDMNFIGLGGCGGGLSEKIAVKRRWVHPISDKIPLDQAALIEPLS
                     VGHHAYVRSGAKAGDVALVGGAGPIGLLLAAVLKAKGIKVIITELSKARKDKARESGV
                     ADYILDPSEVDVVEEVKKLTNGEGVDVAFECTSVNKVLDTLVEACKPAANLVIVSIWS
                     HPATVNVHSVVMKELDVRGTIAYCNDHAETIKLVEEGKINLEPFITQRIKLDELVSEG
                     FERLIHNNESAVKIIVSPNL"
     gene            1415..1738
                     /locus_tag="ACJJDE_001031"
     CDS             1415..1738
                     /locus_tag="ACJJDE_001031"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - L-histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HGG7540974.1"
                     /translation="MGDSVLSAIQQTITQRKSANPSESYVAQLLHKGEDKILKKVIEE
                     AGEVLMASKDKNPSHLVYEVADLWFHTMILLTHHDLKAEDVLDELARRQGLSGLAEKA
                     ARTES"
     gene            1810..2133
                     /locus_tag="ACJJDE_001032"
     CDS             1810..2133
                     /locus_tag="ACJJDE_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine triad nucleotide-binding protein"
                     /protein_id="HGG7540975.1"
                     /translation="MDNCIFCKIAAKDIPAQTVYEDGEMVCFKDINPAAPVHLLLIPK
                     VHFDSLAHAAPEHQPLLGKMMLKVPEIAKAAGLADGFKTLINTGKGGGQEVFHLHIHI
                     MGTPV"
     gene            2180..2383
                     /gene="tatA"
                     /locus_tag="ACJJDE_001033"
     CDS             2180..2383
                     /gene="tatA"
                     /locus_tag="ACJJDE_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0043953 - protein transport by the Tat
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HGG7540976.1"
                     /translation="MGSFSLTHWIIVLIIVVLIFGTKKLRNVGKDLGGAVHDFKQGLN
                     EGTDGKEAQKDDVIEHKKDEDKA"
     gene            2387..3073
                     /gene="tatB"
                     /locus_tag="ACJJDE_001034"
     CDS             2387..3073
                     /gene="tatB"
                     /locus_tag="ACJJDE_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008320 - protein transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase protein
                     TatB"
                     /protein_id="HGG7540977.1"
                     /translation="MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVG
                     SVKQEFDTQIELEELRKAKQEFEAAAAQVRDSLKETGTDMEGNLHDISDGLKPWEKLP
                     EQRTPADFGVDENGNPLPDAANTLSDGISDVMPSERSYASAETLGDSGQTGSTAEPAE
                     TDQDRAWREYLTASAAAPVVQTVEVSYIDTAVETPVPHTTSLRKQAISRKRDFRPKHR
                     AKPKLRVRKS"
     gene            3087..3857
                     /gene="tatC"
                     /locus_tag="ACJJDE_001035"
     CDS             3087..3857
                     /gene="tatC"
                     /locus_tag="ACJJDE_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HGG7540978.1"
                     /translation="MSETQNEQPVQPLVEHLIELRRRLMWTVVGILVCFFGLMPFAQQ
                     LYTFIADPLMANLPKDTSMIATDVIAPFFVPVKVTLMAAFLISLPHTLYQIWAFVAPA
                     LYQNEKRLITPLVLSSVSLFFIGMAFAYFLVFPVIFKFLAGVTPVGVNMATDIDKYLS
                     FILGMFVAFGTTFEVPIVVILLTKIGVVTTGQLKRARPYVIVGAFVIAAIITPPDVIS
                     QTLLAIPLILLYEAGIWFGRFFTPRSEQDGDIQPPATT"
     gene            3910..4515
                     /locus_tag="ACJJDE_001036"
     CDS             3910..4515
                     /locus_tag="ACJJDE_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030428 - cell septum [Evidence IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0000917 - division septum assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family nucleotide pyrophosphatase"
                     /protein_id="HGG7540979.1"
                     /translation="MNTLYLGSNSPRRMEILTQLGYRVIQLPAGIDESVKAGETPFAY
                     VQRMAEEKNRTALPLFCETNGTMPDFPLITADTCVVSDGIILGKPRSQAEAIEFLNRL
                     SGKQHTVLTAVCIHYRGKTSSRVQTNRVVFKPLSSEEISAYVQSGEPMDKAGAYAVQG
                     IGGIFIQSIEGSFSGIMGLPVYETVSMLQDLGYRTPPFIRA"
     gene            4531..4884
                     /locus_tag="ACJJDE_001037"
     CDS             4531..4884
                     /locus_tag="ACJJDE_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2069 domain-containing protein"
                     /protein_id="HGG7540980.1"
                     /translation="MNRQTAYLLTSFSLIALIILSLSWELWIAPLRPGGSWLALKALP
                     LCLPLSGILKKKIYTYQYSSMLVLIYFAEAVMRLFDAYPAEQICAALSAVFSIIFFIS
                     CLSFVKQYKETNNAR"
     gene            4874..6688
                     /locus_tag="ACJJDE_001038"
     CDS             4874..6688
                     /locus_tag="ACJJDE_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Wzy polymerase domain-containing protein"
                     /protein_id="HGG7540981.1"
                     /translation="MPAETTVSGAHPAAKLPIYILPCFLWIGIVPFTFALKLKPSPDF
                     YHDAAAAAGLIVLLFLTAGKKLFDVKIPAISFLLFAMAAFWYLQARLMNLIYPGMNDI
                     VSWIFILLAVSAWACRSLVAHFGQERIVTLFAWSLLIGSLLQSCIVVIQFAGWEDTPL
                     FQNIIVYSGQGVIGHIGQRNNLGHYLMWGILAAAYLNGQRKIPPALGAICLIMQTAVL
                     GLVNSRTILTYIAAIALILPFWYFRSDKSNRRTMLGIAAAVFLTALFQFSMNTILETF
                     TGIRYETAVERVANGGFTDLPRQIEWNKALAAFQSAPIFGHGWNSFAQQTFLINAEQH
                     NIYDNLLSNLFTHSHNIVLQLLAEMGISGTLLVAATLLTGIAGLLKRPLTPASLFLIC
                     TLAVSMCHSMLEYPLWYVYFLIPFGLMLFLSPAEASDGIAFKKAANLGILTASAAIFA
                     GLLHLDWTYTRLVNAFSPATDDSAKTLNRKINELRYISANSPMLSFYADFSLVNFALP
                     EYPETQTWAEEATLKSLKYRPHSATYRIALYLMRQGKVAEAKQWMRATQSYYPYLMPR
                     YADEIRKLPVWAPLLPELLKDCKAFAAAPGHPEAKPCK"
     gene            6878..7555
                     /gene="misR"
                     /locus_tag="ACJJDE_001039"
     CDS             6878..7555
                     /gene="misR"
                     /locus_tag="ACJJDE_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator MisR"
                     /protein_id="HGG7540982.1"
                     /translation="MSRVLLVDDDALLTELLTEYLSAEGLNVRSVPDGEAGVQEILSG
                     QYDVVVLDSMMPKMNGLDVLKNVRARSTVPIIMLTAKGDDIDRIIGLEMGADDYVPKP
                     CTPRELLARINAILRRAQHSGEQNNAPNSISVSDVVLYPAKRQASVKDMPLELTSTEF
                     NLLEVLMRHAGQVVSKETLSVEALDRKLAKFDRSIDVHISSIRHKLGDASLIQTVRGL
                     GYLFVKN"
     gene            7568..8974
                     /gene="misS"
                     /locus_tag="ACJJDE_001040"
     CDS             7568..8974
                     /gene="misS"
                     /locus_tag="ACJJDE_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     MisS"
                     /protein_id="HGG7540983.1"
                     /translation="MKLFQRIFATFCAVIVCAIFVASFSFWLVQNTLAENQFNQRRTI
                     ETTLMGSIISAFRARGDAGAREILTEWKDSPVSSGVYVIQGDEKKDILNRYIDSYTIE
                     RARLFAAGHPHSNLVHIEYDRFGEEYLFFTKDWDKLQARRLPSPLLIPGLPLAPIWHE
                     LIILSFIIIVGLLMAYILAGNIAKPIRILGNGMDRVANGELETRISQQVDDRDDELSH
                     LAIQFDKMVEKLEKLVAKERHLLHHVSHEMRSPLARMQAIVGLIQAQPQKQEQYLKRL
                     EGELTRMDTLVGELLTLSRLETSNMALEKESLKLLPFLGNLVEDNQSIAQKNGQTVTL
                     SADGKIPENTTILANESYLYRAFDNVIRNAINYSPEGSTILINIGQDHKHWIIDVTDN
                     GPGVDEMQLPHIFTAFYRADSSANKPGTGLGLALTQHIIEQHCGKIIAENIKPNGLRM
                     RFILPKKKTGSKTEKSAN"
     gene            9092..11518
                     /locus_tag="ACJJDE_001041"
     CDS             9092..11518
                     /locus_tag="ACJJDE_001041"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7540984.1"
                     /translation="MSAQTDPGYFFMPNHIILIGASERPYSLGERVLSNLLSTPFQGK
                     ITPVNPRHHTIAGLPAYTSLNKIPGNADLIIAVTLPDSYDTLFKTCRKKQLRHIILIQ
                     DWDNLSTAELHTAETAIRKHHGNGLNITACTTAGIQLPSLGLNISTQDGYAAGHTAIL
                     TGNAAVSRQIDNILNKLRQGTSRHISLHPGISPITSADWLNRFGHSLHTKTAVLHHNP
                     KEDQRKLFSAIRQFTRHTPLILHITCRTTETDRAVLHCLARHCNFLISFNADDLEAAL
                     RAQLSDLPPLSRLDILSDTPAEWLNAHAPKTLALHFPNLPHHIRNGHLTGTPTPSICH
                     DIASRQLARPDTQAVLTILSPSGHEDYKKTARALIRLSEQTAKPLLVSSPFSDGITHF
                     DTPTQAIRTLSYRNTAAALKQAQLDIAPPQPCRLKTPQPQNIKKALAAANPSLLAEAL
                     HLPPYRHTTHNAVQFQFDSHPLYGDILTARCNGQTTAVLPPFTTLDSRHLARFAELDG
                     TQTLDQFLHTLTVIPEYRQHILGITLNLNGGQYSSDFLLKTPETHDTPKRKNTGKAAQ
                     TLEHAAAKMQSAAAYLKHKNPTAAEFLRHTSEAAAELLGSKTETGAAVPNVLAPYPAA
                     HLKTLSLKNNTTVTITPLLPEDAEAKQQFVRSLSPEARYTRFMTHTNELPAATLARLC
                     NPDYHCEAAWTARDADSNIVAVVRHSRLNRNECEFGITLAEHMRGSGLAQKMMELIIQ
                     TAAQQGYRTMSADILKTNTPMIKLAEKSGFTLKESDTEKNLYRAYLNLAADKTTEKTN
                     KNLHTDHKIT"
     gene            11563..11808
                     /gene="rpsP"
                     /locus_tag="ACJJDE_001042"
     CDS             11563..11808
                     /gene="rpsP"
                     /locus_tag="ACJJDE_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HGG7540985.1"
                     /translation="MVVIRLARGGSKHRPFYNVIVTDSRSRRDGRFIERVGFYNPVAN
                     EKQERVRLNADRLNHWIAQGAQVSDSVAKLIKEQKAA"
     gene            11824..12333
                     /gene="rimM"
                     /locus_tag="ACJJDE_001043"
     CDS             11824..12333
                     /gene="rimM"
                     /locus_tag="ACJJDE_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748672.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HGG7540986.1"
                     /translation="MTDTQNRVAMGYIKGVFGIKGWLKIAANTEYSNSLLDYPEWHLV
                     KDGKTISVTLEAGKVVNSELQVKFEGINDRDLAFSLRGYTIEIPREAFAPTEEDEYYW
                     ADLVGMTVVNKDHTVLGKVSNLMETGANDVLMIDGEHGQILIPFVSQYIETVDTGSKT
                     ITADWGLDY"
     gene            12333..13082
                     /gene="trmD"
                     /locus_tag="ACJJDE_001044"
     CDS             12333..13082
                     /gene="trmD"
                     /locus_tag="ACJJDE_001044"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HGG7540987.1"
                     /translation="MLIQAVTIFPEMFDSITRYGVTGRANRQGIWQFEAVNPRKFADN
                     RLGYIDDRPFGGGPGMIMMAPPLHAAIEHAKAQSSQTAKVIYLSPQGKPLTHQKAVEL
                     AELPHLILLCGRYEGIDERLLQTSVDEEISIGDFVVSGGELPAMMLMDAVLRLVPGVL
                     GDMQSAEQDSFSSGILDCPHYTKPLEFQGMAVPEVLRSGNHGLIAEWRLEQSLRRTLE
                     RRPDLLEKRVLIPKESRLLETIRQEQREIQS"
     gene            13098..13463
                     /gene="rplS"
                     /locus_tag="ACJJDE_001045"
     CDS             13098..13463
                     /gene="rplS"
                     /locus_tag="ACJJDE_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HGG7540988.1"
                     /translation="MNLIQQLEQEEIARLNKEIPEFAPGDTVVVSVRVVEGTRSRLQA
                     YEGVVIARRNRGLNSNFIVRKISSGEGVERTFQLYSPTVEKIEVKRRGDVRRAKLYYL
                     RGLTGKAARIKEKLPARKG"
     gene            13784..14509
                     /locus_tag="ACJJDE_001046"
     CDS             13784..14509
                     /locus_tag="ACJJDE_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HGG7540989.1"
                     /translation="MSIIVENLTVSYRRRPAVHHVDITFEEHSMWAVFGPNGAGKSTF
                     LKSLMGLQPIDTGSIRLDGLTRQNIAYLPQQSDIDRSQPMTVFDLAAMGLWYEIGFFR
                     GINTVQKQRVHEALERVGMRQFARRQIAHLSNGQFQRVLFARMLVQNAKFLLLDEPFN
                     AVDARTTYELLDVLQKCHCNGHAIIAVLHDYEQVRAYFPNTLLLAREKIAAGATETIL
                     TEPYLAQANAKMQQQESPDWCAS"
     gene            14544..15419
                     /locus_tag="ACJJDE_001047"
     CDS             14544..15419
                     /locus_tag="ACJJDE_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HGG7540990.1"
                     /translation="MNLYDLLLAPFTEFDFMRYALASVFCLSLSAAPVGVFLVMRRMS
                     LIGDALSHAVLPGAAVGYMFAGLSLPAMGLGGVAAGMLMALLAGLVSRFTTLKEDANF
                     AAFYLSSLAIGVVLVSKNGSSVDLLHLLFGSVLAVDIPALQLIAAVSTLTLLTLAVIY
                     RPLVLESIDPLFLKSVGGKGGLWHVLFLVLVVMNLVSGFQALGTLMSVGLMMLPAITA
                     RLWAKHMGALILLSVLTALLCGLSGLLISYHIEIPSGPAIILCCSVLYLFSVILGKEG
                     GILTKWLKNHRHHTT"
     gene            15496..16410
                     /locus_tag="ACJJDE_001048"
     CDS             15496..16410
                     /locus_tag="ACJJDE_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HGG7540991.1"
                     /translation="MKHLKLTLIAALLTTAATAAPLPVVTSFSILGDVAKQIGGERVS
                     IQSLVGANQDTHAYHMTSGDIKKIRSAKLILLNGLGLEAADIQRAVKQSKVSYAEATK
                     GIQPLKAEEEGGHHHDHDHDHEGHHHDHGEFDPHVWNDPVLMSAYAQNVAEALIKADP
                     EGKVYYQQRLGNYQMQLKKLHSDAQAAFNAVPAAKRKVLTGHDAFSYMGKRYHIEFIA
                     PQGVSSEAEPSAKQVAAIIRQIKREGIKAVFTENIKDTRMVDRIAKETGVNVSGKLYS
                     DALGNAPADTYIGMYRHNIKALTNAMKQ"
BASE COUNT         4305 a         5311 c         3620 g         3307 t
ORIGIN      
        1 gccgtctgaa gccgattcgg ttttcagacg gcatcattat ttgacctgac gcaaacagaa
       61 agccttccgc gtgcttaaac acatctcttg tagtaaaata tctaaacaga ttcaactgga
      121 aacggtcagg cttcttcacg ccattcccat ttcaaccgcc gcctgccaga ttcagacggt
      181 attcctactt gaaaacaagg agcgttacaa tgaaagcagc acgtttttac gataaaggcg
      241 acatccgcat cgaagacatc cccgaaccga ccgtcgcccc cggcactgtc ggcatcaatg
      301 tcgcctggtg cggcatctgc ggtactgacc tgcacgaatt catggaaggc ccgattttca
      361 ttccgccttg cggtcatccg cacccgattt ccggcgagtc cgcacccgtc acgatgggac
      421 acgagttctc cggcgtggtc tatgccgtcg gcgaaggcgt ggacgacatc aaagtcggcc
      481 aacacgtcgt ggtcgaaccc tacatcatcc gcgatgacgt accgaccgga gaaggcagca
      541 actaccacct ctccaaagat atgaacttta tcggcttggg cggctgcggc ggcggtctgt
      601 ccgaaaaaat cgccgtcaaa cgtcgttggg tgcatccgat ttccgacaaa atcccgttgg
      661 atcaagccgc tttgatcgaa ccgctgtctg tcggacacca cgcctatgta cgcagcggcg
      721 cgaaagcagg cgacgtcgca ttggtcggcg gtgcaggtcc gatcggtttg ctgttggctg
      781 ccgtgttgaa agccaaaggc atcaaagtca tcatcaccga gttgagtaaa gcacgcaaag
      841 acaaagcgcg cgaatccggc gttgccgact acatcctcga cccgtccgaa gtcgatgttg
      901 tcgaagaggt gaaaaaactg accaacggcg aaggcgtgga cgtggcattc gaatgtacca
      961 gcgtgaacaa agtgttggat actttggtcg aagcctgcaa acctgccgcc aatttggtta
     1021 tcgtatccat ctggagccac cctgcaaccg tcaacgtcca cagcgtcgtg atgaaagagc
     1081 tggatgtgcg cggcacgatt gcctactgta acgaccacgc cgaaaccatc aaactggtcg
     1141 aagaaggcaa aatcaacctc gaacccttca tcacccagcg catcaagctg gacgaactgg
     1201 tttccgaagg cttcgagcgt ctgatccaca acaacgaatc cgccgttaaa attattgtga
     1261 gtccaaacct gtaagcaaat tacatttgca acagcacaaa tgccgtctga aacgctcaga
     1321 cggcattttc caacgaagcg caacaggcgt attgcccgag agcagccgtt tagcctatca
     1381 ttccgaacaa acagaaacaa acagaaggaa aatcatggga gattccgtac tatccgccat
     1441 ccaacaaacc atcacccagc gaaaatctgc caatccgtcc gaatcttacg tcgcacagct
     1501 cttgcataag ggcgaagaca aaatcctaaa aaaagtgatt gaagaggcgg gcgaagtgtt
     1561 gatggcatcc aaagacaaaa acccgtccca cctggtttac gaagttgccg acttatggtt
     1621 tcacaccatg attcttctga cacaccacga cctgaaggcg gaagacgtat tggacgaact
     1681 tgcgcgccgc caaggtttgt cgggcttggc cgaaaaagcc gctcgcacag aatcttgaat
     1741 ttatattaaa atccgcactt tcccacattc aatccgtctg accgcttttc agacggcatc
     1801 ggagccgtta tggacaactg tattttctgc aaaatcgccg ccaaagacat tccggcgcaa
     1861 accgtctatg aagacggcga aatggtttgt ttcaaagaca tcaaccccgc tgctccggtt
     1921 catctgctgc tgattcccaa agtccatttc gattcgttgg cacacgccgc gcccgaacat
     1981 cagccccttt tgggaaaaat gatgctgaaa gttcccgaaa tcgccaaagc ggcaggactg
     2041 gcagacggct tcaaaaccct gatcaacacc ggcaaaggcg gcggacaaga ggttttccac
     2101 ctgcatatac acatcatggg cacacccgta taaaccgtta tttcacaatc aacccctaat
     2161 acttacttaa ggatacatca tgggcagttt ttctctgacg cactggatta tcgtactgat
     2221 tatcgtcgtt ttgatattcg gcaccaaaaa actgcgcaac gtcggcaaag acctcggcgg
     2281 tgcggttcat gacttcaaac aggggctgaa cgaaggtaca gacggcaaag aagcccaaaa
     2341 agacgatgta atcgaacaca aaaaagacga agacaaagcg taatttatgt ttgatttcgg
     2401 tttgggcgag ctggtttttg tcggcattat cgccctgatt gtcctcggcc ccgaacgcct
     2461 gcccgaggcc gcccgcaccg ccggacggct catcggcagg ctgcaacgct ttgtcggcag
     2521 cgtcaaacag gaatttgaca ctcaaatcga actggaagaa ctgaggaagg caaagcagga
     2581 atttgaagct gccgccgctc aggttcgaga cagcctcaaa gaaaccggta cggatatgga
     2641 aggcaatctg cacgacattt ccgacggtct gaagccttgg gaaaaactgc ccgaacagcg
     2701 gacacctgcc gatttcggtg tcgatgaaaa cggcaatccg cttcccgatg cggcaaacac
     2761 cctatcagac ggcatttccg acgttatgcc gtccgaacgt tcctacgctt ccgccgaaac
     2821 ccttggggac agcgggcaaa ccggcagtac agccgaaccc gcggaaaccg accaagaccg
     2881 cgcatggcgg gaatacctga ctgcttctgc cgccgcaccc gtcgtacaga ccgtcgaagt
     2941 cagctatatc gataccgctg ttgaaacccc tgttccgcat accacttccc tgcgcaaaca
     3001 ggcaataagc cgcaaacgcg attttcgtcc gaaacaccgc gccaaaccta aattgcgcgt
     3061 ccgtaaatca taaagagagc aatccggtgt ccgaaacaca aaacgaacaa cccgtccaac
     3121 cgcttgtcga gcatctcatc gagctgcgcc gccgcctgat gtggacggtt gtcggcatct
     3181 tagtctgctt tttcggccta atgccgtttg cccaacaact ctatactttt atcgccgacc
     3241 cgctgatggc aaacctgccc aaagacacca gcatgattgc cacagatgtc atcgcaccgt
     3301 ttttcgttcc ggtcaaagtt accctgatgg cggcattttt aatttcgctg ccgcatacgc
     3361 tctaccaaat ctgggcattt gtcgcccccg cactctacca aaacgaaaaa cgcctgatta
     3421 cgccgctcgt cctctccagc gtcagcctgt ttttcatcgg tatggcattt gcctactttt
     3481 tggttttccc cgtcattttc aaattccttg ccggcgttac ccctgtcggg gtcaatatgg
     3541 cgacagacat cgacaaatac ctctccttca tcttggggat gtttgtcgca ttcggtacaa
     3601 cgtttgaagt ccccattgtc gttatcctgt taaccaaaat tggtgtggta acaaccggac
     3661 agctcaaacg cgcccgcccc tatgtgattg tcggcgcgtt tgtcattgcc gccatcatca
     3721 cgccgcccga tgtgatttca caaaccctgc ttgccattcc gctgattctc ttatacgaag
     3781 caggtatttg gttcggacgc tttttcacgc cacgttcaga acaggatggc gacatacagc
     3841 cgcctgcaac aacctgacac tatgccgtcc gaacctccgc ctcataccgc cacagattaa
     3901 ggaatacctt tgaataccct ctatttaggt tcaaacagcc cgcgccgaat ggaaatcctg
     3961 acgcagttgg gctaccgcgt catccaactg cccgccggca tcgacgaatc cgttaaagcc
     4021 ggcgaaacac ctttcgctta cgttcaaagg atggcagaag aaaaaaaccg aaccgccctg
     4081 cccctctttt gcgaaaccaa cggcacaatg cccgattttc ccctgattac cgccgacacc
     4141 tgcgtcgttt cagacggcat catattaggc aaaccccgct cccaagccga agcaatcgaa
     4201 tttttaaacc gattgtccgg caaacaacat accgtcctga ctgctgtctg cattcattat
     4261 cgcggcaaaa cgtcaagccg cgtccaaacc aaccgcgtcg ttttcaagcc cctgagttcg
     4321 gaagaaattt ccgcctatgt gcaaagcggc gaaccgatgg acaaagccgg cgcctacgcc
     4381 gtacaaggca taggcggcat ctttatccaa tctatcgaag gcagcttcag cggcattatg
     4441 gggctgcccg tttatgaaac cgtttcgatg ttgcaggatt tgggataccg taccccacct
     4501 ttcatccgag cctaacccgt aaagaccgcc gtgaacagac aaaccgctta cctccttacc
     4561 tctttcagcc tgatcgcact gataatcctg tccctttcct gggaactgtg gattgcaccg
     4621 ttgcgcccgg gcggctcgtg gctcgcgctc aaagccctcc ccctctgtct gccgctttca
     4681 ggcatcttga aaaagaaaat ctatacctac caatacagct ccatgctggt tctgatttac
     4741 tttgccgaag ccgtcatgcg cctgttcgac gcctatcccg cagaacagat ttgcgccgcg
     4801 ctttccgcag tattcagcat catcttcttc atatcctgcc tgtcgttcgt caaacaatac
     4861 aaggaaacaa acaatgcccg ctgaaacgac cgtatccggc gcgcaccccg ccgccaaact
     4921 gccgatttac atcctgccct gcttcctttg gataggcatc gtccccttta ccttcgcgct
     4981 caaactgaaa ccgtcgcccg acttttacca cgatgccgcc gccgcagccg gactgattgt
     5041 cctgttgttc ctcacggcag gaaaaaaact gtttgatgtc aaaatccccg ccatcagctt
     5101 ccttctgttt gcaatggcgg cgttttggta tcttcaggca cgcctgatga acctgattta
     5161 ccccggtatg aacgacatcg tctcttggat tttcatcttg ctcgccgtca gcgcgtgggc
     5221 ctgccggagc ttggtcgcac acttcggaca agaacgcatc gttaccctgt ttgcctggtc
     5281 gctgcttatc ggctccctgc ttcaatcctg catcgtcgtc atccagtttg ccggctggga
     5341 agacacccct ctgtttcaaa acatcattgt ttacagcggg caaggcgtaa tcggacacat
     5401 cggacagcgc aacaacctcg gacactacct catgtggggc atactcgccg ccgcctacct
     5461 caacggacaa cgaaaaatcc cgcccgcctt gggtgcaatc tgcctgatta tgcagaccgc
     5521 cgttttaggt ttggtcaatt cgcgcaccat cttgacctac atagccgcca tcgccctcat
     5581 ccttcccttc tggtatttcc gttcggacaa atccaacagg cggacgatgc tcggcatagc
     5641 cgcagccgta ttccttaccg cgctgttcca attttccatg aacaccattc tggaaacctt
     5701 taccggcatc cgctacgaaa ctgccgtcga acgcgttgcc aacggcggtt tcacagactt
     5761 gccgcgccaa atcgaatgga ataaagccct tgccgccttc cagtccgccc cgatattcgg
     5821 gcacggctgg aacagttttg cccaacaaac cttcctcatc aatgccgaac agcacaacat
     5881 atacgacaac ctcctcagca acttgttcac ccattcccac aacatcgtcc tccaactcct
     5941 tgcagagatg ggaatcagcg gcacgcttct ggttgccgca accctgctga cgggcattgc
     6001 cgggctgctt aaacgccccc tgacccccgc atcgcttttc ctaatctgca cgcttgccgt
     6061 cagtatgtgc cacagtatgc tcgaatatcc tttatggtat gtctatttcc tcatcccctt
     6121 cggactgatg ctcttcctgt cccccgcaga ggcttcagac ggcatcgcct tcaaaaaagc
     6181 cgccaatctc ggcatactga ccgcctccgc cgccatattc gcaggattgc tgcacttgga
     6241 ctggacatac acccggctgg ttaacgcctt ttcccccgcc actgacgaca gtgccaaaac
     6301 cctcaaccgg aaaatcaacg agttgcgcta tatttccgca aacagtccga tgctgtcctt
     6361 ttatgccgac ttctccctcg taaacttcgc cctaccggaa taccccgaaa cccagacttg
     6421 ggcggaagaa gcaaccctca aatcactaaa ataccgcccc cactccgcca cctaccgcat
     6481 cgccctctac ctgatgcggc aaggcaaagt tgcagaagca aaacaatgga tgcgggcgac
     6541 acagtcctat tacccctacc tgatgccccg atacgccgac gaaatccgca aactgcccgt
     6601 atgggcgccg ctgctacccg aactgctcaa agactgcaaa gccttcgccg ccgcgcccgg
     6661 tcatccggaa gcaaaaccct gcaaatgacc cgcgccggcg gatgcggata ccgcccgaaa
     6721 tgtaaagctc catgcaagac attgcaaaaa acagcaaacc ggtagggaaa tacgctatca
     6781 aaaaacattg cagccgtgtt aagataaacc gtcaaacaat cttttcacgc cccgcccgaa
     6841 acagggtcgg ggcataccct tacgaaaagg aaacaccatg agccgcgtat tactcgtaga
     6901 tgacgatgcc ctgctaaccg aactgctgac cgaatacctg agcgccgaag gtctgaacgt
     6961 ccgcagcgtt cccgacgggg aagcaggcgt acaggaaatc ctgagcgggc agtacgatgt
     7021 agtcgtattg gattccatga tgcccaaaat gaacggcttg gatgtcttga aaaacgtacg
     7081 cgcccgaagc accgtcccca tcatcatgct gaccgccaaa ggcgacgaca tcgaccgaat
     7141 catcggcttg gaaatgggcg cggacgacta tgtccccaaa ccctgcacac cacgcgaact
     7201 cttggcacgc atcaatgcca tcctgcgccg cgcacaacac agcggcgaac agaacaacgc
     7261 acccaacagc atctccgtca gcgatgtcgt cctgtacccc gccaaacgcc aggcatccgt
     7321 caaagacatg ccgctcgaac tgaccagcac cgaattcaac ctgctcgaag tcctgatgcg
     7381 ccatgccgga caggtagtca gcaaagaaac cctgtccgtc gaagcactcg accgcaagct
     7441 ggcaaaattc gaccgcagta tcgacgtaca catctccagc atccgccaca agttgggcga
     7501 tgcctctctg attcaaaccg tacgcggctt gggctacctg tttgtcaaaa actgaagcaa
     7561 cgggcaaatg aaactgttcc aacgcatctt cgccacattt tgcgcggtta tcgtctgtgc
     7621 aatctttgtg gcgagttttt ctttttggct ggtgcagaac acccttgccg aaaaccagtt
     7681 caaccaacgc cgcaccatcg aaaccacttt gatgggcagc atcatttccg cattccgggc
     7741 acgcggggac gcgggcgcgc gcgaaatcct gacggaatgg aaagacagcc ccgtctcatc
     7801 gggcgtgtac gttatacagg gcgacgagaa aaaagatatc ctgaaccggt atatcgacag
     7861 ctataccatc gaacgcgccc ggcttttcgc cgccggacac ccgcattcca acctcgtcca
     7921 tatcgaatac gaccgcttcg gcgaagaata cctgttcttc accaaagact gggacaaact
     7981 ccaagcccgc cgcctgccca gccccctgtt gatccccggc ctgccgctcg ccccgatttg
     8041 gcacgaactc atcatattgt ccttcatcat catcgtcgga ctgctgatgg catatatcct
     8101 cgccggcaac attgccaaac ccatcagaat cttaggcaac ggcatggaca gggtggcaaa
     8161 cggagaactt gaaacccgta tctcccaaca ggtcgacgac cgcgacgacg aattgtccca
     8221 tcttgccatc caattcgaca aaatggtgga aaaactcgaa aaactcgttg ccaaagaacg
     8281 ccacctgctc caccacgttt cccacgaaat gcgctccccg cttgcccgta tgcaggcgat
     8341 tgtcggactg attcaggcgc agccccaaaa acaggaacaa tatctcaaac ggctggaagg
     8401 cgaactgacc cgcatggata cgctggtcgg ggaactgtta accctgtccc gtctcgaaac
     8461 ttccaatatg gctttggaaa aagaaagcct gaaactcctg cccttcctgg gcaacctggt
     8521 agaagacaat caaagcattg cccagaaaaa cggacaaacg gttaccctgt ctgccgacgg
     8581 aaaaatcccc gaaaacacaa ccatccttgc caacgaaagc tacctgtacc gcgccttcga
     8641 caacgtcatc cgcaacgcca tcaactacag tcccgaaggc agcaccatcc tgatcaacat
     8701 cggacaagac cacaaacact ggataatcga cgttaccgac aacggccccg gcgtggacga
     8761 aatgcagctc ccgcacatct tcaccgcttt ctaccgtgca gactccagtg ccaacaaacc
     8821 cggaacagga ctggggcttg cattgaccca acatattatt gaacagcact gcggaaaaat
     8881 catcgccgaa aacatcaaac cgaacggtct gcggatgcgc ttcatcctac ccaagaaaaa
     8941 aaccggttcc aaaacagaaa aaagtgcgaa ctgaccataa tgccgtctga accggcttca
     9001 gacggcattg cacaaacagt tactccaaaa caaacacaca gcgggtgcat ctccaacaat
     9061 cacgcacata ccgtccgcaa aggaatatat catgtcggca caaaccgatc cgggctactt
     9121 tttcatgccc aaccacatta tcctgatagg cgcgagcgaa cgtccgtaca gcctgggcga
     9181 acgcgtactc agcaacctgc tgagtacgcc ctttcaagga aaaatcaccc ccgtaaaccc
     9241 gcgccaccac accatagccg ggcttcccgc ctacaccagc ctcaacaaaa tccccggcaa
     9301 tgcagacctg attattgccg ttaccctacc cgacagttac gacaccctct tcaaaacctg
     9361 ccgcaaaaag cagctccgac acatcatcct catacaggac tgggacaacc tgtctaccgc
     9421 agaactgcac accgccgaaa ctgccatccg caaacaccac ggcaacggac tcaacatcac
     9481 cgcctgcacc accgcaggca tccaactgcc ctcactcgga cttaacatca gtacccaaga
     9541 cggatacgcc gcaggccata ccgccatact gaccggcaat gccgccgtca gccgccaaat
     9601 cgacaacatc ctgaacaaac tccgtcaagg cacatcccgc cacatcagcc tgcatcccgg
     9661 catcagcccc atcacatccg ccgattggct caaccgcttc ggacacagcc tgcacaccaa
     9721 aaccgccgtc ctacaccaca accctaaaga ggatcagcgc aaactgttca gcgcaatccg
     9781 ccaatttacc cgccatacgc cgctgattct ccacatcacc tgccgcacga cagaaaccga
     9841 ccgtgccgta ctgcactgcc tcgcccgaca ctgcaacttc ctcatcagtt tcaacgccga
     9901 cgaccttgaa gccgcactgc gcgcccaact gtccgacctt ccacccctgt cccgactcga
     9961 catcctgtcc gacacgcctg ccgaatggct gaacgcgcac gcgccaaaaa ccctcgccct
    10021 ccactttccc aaccttcccc accacatccg caacggacac ctgaccggca cacccacacc
    10081 ctcaatctgc cacgacatcg cctcacgtca gcttgcccgc cccgacaccc aagccgtcct
    10141 gaccatcctc agcccctccg gacacgagga ttacaaaaaa acagcacgcg cccttatccg
    10201 cctgtccgaa cagaccgcca aacccctgct cgtcagcagc cccttttcag acggcataac
    10261 acatttcgac acccccactc aggcaatccg caccctttcc taccgcaaca ccgccgccgc
    10321 cctgaaacag gcacagctcg acattgcacc gccgcagcca tgccgtctga aaacaccgca
    10381 accccaaaac atcaaaaaag cccttgcagc ggcaaacccc tccctgctcg ccgaagccct
    10441 gcacctcccc ccctaccggc acaccaccca taacgccgta caattccaat tcgacagcca
    10501 ccccctctat ggcgacatcc tgaccgcacg ctgcaacgga caaaccactg ccgtactccc
    10561 gccgtttacc acgctcgaca gccgccacct tgcccgcttt gccgaactcg acggcacaca
    10621 aaccctcgac cagttcctgc acacactgac cgtcattccc gaataccgcc aacacattct
    10681 cggcatcacc ctcaacctca acggcggaca atacagcagc gatttcctct taaagacacc
    10741 cgaaacacac gacacgccca aacgcaagaa cacaggcaaa gccgcccaaa ccctcgaaca
    10801 tgccgccgca aaaatgcaga gtgccgccgc atacctgaaa cacaaaaacc cgacagccgc
    10861 cgaatttctc cgccacacaa gcgaagccgc cgcagaactg ctcggcagca aaaccgaaac
    10921 cggagcagcc gtacccaacg tacttgcccc ctatcccgca gcacacctca aaacactgtc
    10981 cctaaaaaac aacacgaccg ttaccattac cccccttttg cccgaagacg cagaagccaa
    11041 acagcagttc gtccgcagcc tcagccccga agcacggtac acacgtttca tgacccacac
    11101 caacgaactg cccgcagcca cgttggcacg cctgtgcaac cccgactacc actgtgaagc
    11161 cgcatggacg gcaagggatg ccgacagcaa catcgtcgcc gtcgtccgcc acagccgcct
    11221 gaaccgcaac gaatgcgaat tcggcatcac actggcggaa catatgcgcg gcagcggact
    11281 ggcacagaaa atgatggaac tcatcatcca aaccgccgca cagcaaggct accggactat
    11341 gagtgccgac attctcaaaa ccaatactcc catgatcaaa cttgctgaaa aatcaggatt
    11401 taccctcaag gaatcggaca ccgaaaaaaa cctgtaccgc gcatatctga accttgcggc
    11461 agacaaaaca acagaaaaaa caaataaaaa cttgcacacc gaccacaaaa taacctaaaa
    11521 tcggcagttt ccatatatcc gattttctca aaaggactca aaatggtagt tatccgtttg
    11581 gcacgcggcg gctcgaaaca ccgccctttc tacaacgtca tcgttactga ctcacgcagc
    11641 cgccgcgacg gccgcttcat cgaacgcgta ggcttctaca accccgtagc caacgaaaaa
    11701 caagagcgcg tccgcctcaa cgcagaccgc ctgaaccact ggattgcaca aggcgcgcaa
    11761 gtcagcgact ccgttgcaaa actgattaaa gaacaaaaag ccgcctaatc cacatttgcc
    11821 gccatgacag acactcaaaa ccgggtagcc atgggctaca tcaaaggcgt attcggcata
    11881 aaaggctggt tgaaaattgc cgccaacacc gaatattcca acagcctttt ggactacccc
    11941 gagtggcatt tggtcaagga cggcaaaacc atcagcgtta cccttgaagc cggaaaagtc
    12001 gtcaacagcg aactccaagt taaattcgaa ggcataaacg accgcgactt ggcattctca
    12061 ttgcgcggtt acaccatcga aataccccgt gaagcattcg ccccgacaga agaagacgaa
    12121 tactactggg cagacctggt cggcatgacc gtcgtcaaca aagaccatac cgttttaggc
    12181 aaggtaagca acctgatgga aaccggcgca aacgacgtat tgatgattga cggagaacac
    12241 gggcagattc tgattccgtt cgtttcccaa tatatcgaaa ccgtcgatac cggcagcaag
    12301 accattactg ccgactgggg tttggactac tgatgcttat ccaggcagtt accattttcc
    12361 ccgaaatgtt cgacagcatt acccgctacg gcgtaacggg acgcgcgaac agacagggaa
    12421 tttggcagtt tgaagcagtc aatccccgaa agtttgccga caacagattg ggctacatcg
    12481 acgaccgccc gttcggcggc ggtccgggaa tgattatgat ggctccgccg cttcatgcgg
    12541 caatagaaca cgccaaagca caatcttccc aaaccgcaaa agtcatctac ctcagccccc
    12601 aagggaaacc gctgacacac caaaaagcgg tagaactggc agaacttccg catctgattc
    12661 tgctgtgcgg acgctatgag ggaatagacg aaagactgct gcaaaccagc gtcgatgaag
    12721 aaatcagcat cggagacttc gttgtttccg gcggagagct tcccgccatg atgctgatgg
    12781 atgcagtatt gaggctcgta cccggcgtat tgggcgatat gcagtctgcc gaacaggatt
    12841 cgttctcaag cggcattttg gactgccccc actacaccaa acccttagaa tttcaaggca
    12901 tggctgttcc ggaagtattg cgttccggca atcatggctt gatagcggaa tggcggttgg
    12961 aacaatcgct gcgccgcacc ttggagcgca gacccgatct tttggaaaag cgcgttttaa
    13021 tcccaaagga atcccgcctc ttagaaacca tccggcaaga gcaacgggaa atccaatcat
    13081 aatttaggaa aaaaacaatg aacctgattc aacagctcga gcaagaagaa attgcccgcc
    13141 tgaataaaga aatccccgaa ttcgcaccgg gcgacaccgt agtcgtatcc gtacgcgtcg
    13201 tggaaggtac ccgcagccgt ctgcaagcct acgaaggcgt tgtcattgca cgccgcaacc
    13261 gtggtctgaa cagcaacttc atcgtccgca aaatctccag cggcgaaggt gttgaacgta
    13321 ctttccaact gtactctccg accgtcgaaa aaatcgaagt caaacgccgt ggcgacgtac
    13381 gccgtgccaa actgtactac ctgcgcggcc tgaccggtaa agctgcacgc atcaaagaaa
    13441 aactgcctgc acgcaaaggt tgattcaaac cgttttcccc caatgccgtc tgaaccttca
    13501 gacggcattt cttattgctg cgatgccggc aagtcaacga tatgcctgcc cctcatccac
    13561 cttgattaac aatcactccc gcctattcaa gcataattta cagaccaaac gttatacagt
    13621 atcatatcag ccatataacg ataaacgctt taccgctttc cctttcaaaa ccgcaaatca
    13681 tcatgacacc ttccctttta ctatcaggat tgaccttccg cctcatcctt gccctgattg
    13741 ccgtatccct tttatggggc gtttactttt gggcagtatc cgcatgagca tcattgtcga
    13801 aaacctgacc gtcagctacc gccgccgacc tgccgtgcac catgtggaca ttacttttga
    13861 agaacatagt atgtgggcgg ttttcggtcc caacggcgca gggaaatcca cctttctcaa
    13921 atccttgatg ggattgcagc ctatcgatac aggcagcatc cggctggacg gattgacccg
    13981 tcagaacatt gcctaccttc cccagcagtc cgacatcgac cgctcgcagc ctatgaccgt
    14041 tttcgacttg gcggcaatgg ggctatggta tgaaatcggt tttttcagag gaataaatac
    14101 cgttcaaaaa caacgcgttc acgaagcctt ggagcgtgta ggaatgcggc agtttgcccg
    14161 ccgccaaatc gcccacctct caaacggaca atttcagcgt gtcctttttg cccgaatgct
    14221 ggttcaaaac gccaaattcc tacttctgga cgaacccttc aatgccgttg atgcacggac
    14281 aacctacgag cttctcgacg tattgcaaaa atgtcattgc aacggacacg ctatcattgc
    14341 cgttttgcac gattacgaac aagtccgcgc ctactttccc aataccctgc tgctcgcccg
    14401 agaaaaaatt gcggcaggcg caaccgagac cattctgaca gaaccctacc tcgcccaagc
    14461 caacgccaaa atgcagcaac aggaaagccc cgactggtgc gcctcataaa tactgcccga
    14521 aaccacgccc cacaccagac accatgaatc tctacgacct gctccttgcc ccctttacag
    14581 aattcgactt tatgcgctac gccctcgcat ccgtcttctg cctgtccctc agtgccgcac
    14641 ccgtcggcgt attcctcgtc atgcgccgta tgagcctgat aggcgacgca ttgagccacg
    14701 ccgtcctgcc cggtgccgcc gtcggctaca tgtttgccgg cttgagcctg cccgccatgg
    14761 gtttgggcgg cgtagccgca ggcatgctga tggcactgct tgccggactc gtcagccgct
    14821 tcaccaccct gaaagaagat gccaactttg ccgcctttta tctcagcagc ctcgccatcg
    14881 gtgtagtcct cgtcagcaaa aacggcagca gcgtcgattt gctccacctc cttttcggct
    14941 ccgtacttgc cgtcgatatt cctgccctgc aactcatcgc cgccgtatcc accctcacac
    15001 tgcttaccct tgccgtcatc taccgcccgc tcgtactcga aagcatcgac cccctgttcc
    15061 tcaaatccgt cggcggcaaa ggcgggcttt ggcacgtcct ctttctcgtc ctggtcgtca
    15121 tgaacctcgt atccggcttt caagccctcg gcacactcat gtccgtcgga ctcatgatgc
    15181 tgccagccat taccgcccgc ctatgggcga agcacatggg cgcactcatc ctcctatccg
    15241 ttctgacagc cctgctgtgc ggcttgagcg gactgcttat ttcctaccac atcgaaattc
    15301 cctccggtcc cgccatcatc ctctgttgca gcgtccttta tctcttttcc gtcatactcg
    15361 gcaaagaagg cggcattctg accaaatggc tcaaaaacca ccgccaccac accacctgac
    15421 cccgcaagcc gcttgaacaa acaggcggct tgttttacca taacagatgt tacgttatat
    15481 cacaggagaa cagttatgaa acacctcaaa ctcaccctta ttgccgcatt gctgaccact
    15541 gccgcaactg ccgcccccct tccggttgta accagtttca gcattttagg cgacgttgcc
    15601 aaacaaatcg gcggagagcg cgtatccata caaagtttgg tcggagccaa ccaagatact
    15661 catgcctatc acatgaccag tggcgacatt aaaaaaatcc gcagtgcaaa actcatcctg
    15721 ctcaacggct taggacttga agccgccgac atccaacgtg ccgtcaaaca gagcaaagta
    15781 tcctatgccg aagcgaccaa aggcatccaa cccctcaaag ccgaagaaga aggcggacac
    15841 catcatgacc acgaccatga ccacgaagga caccaccatg accacggcga atttgacccg
    15901 cacgtctgga acgaccccgt cctcatgtcc gcctatgccc aaaacgtcgc cgaagccctg
    15961 ataaaggccg accccgaagg caaagtttat tatcaacaac gcttgggcaa ctaccaaatg
    16021 cagctcaaaa aactgcacag cgacgcacaa gccgcattta acgccgtccc tgccgccaaa
    16081 cgcaaagtcc tgaccgggca cgatgccttt tcctacatgg gcaaacgtta ccatatcgaa
    16141 ttcatcgccc cgcaaggtgt gagcagcgaa gccgagcctt cagccaaaca agtcgccgcc
    16201 atcatccgac aaatcaaacg cgaaggcatc aaagccgtat tcaccgaaaa tatcaaagac
    16261 acccgcatgg ttgaccgtat cgccaaagaa accggcgtca acgtcagcgg caaactgtat
    16321 tccgacgcac tcggcaacgc gcccgcagac acctacatcg gaatgtaccg ccacaacatc
    16381 aaagccttga ccaacgcgat gaagcaataa aaccgtttga ttggtttgaa tttgaaaagg
    16441 caaaaggccg tctgaaaatt atagtggatt aacaaaaatc aggacaaggc gacgaagccg
    16501 cagatagtac agtaaggcga ggcaacgctg tactggtttt tgt
//
LOCUS       DBBZXU010000038        16496 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.038, whole genome shotgun sequence.
ACCESSION   DBBZXU010000038 DBBZXU010000000
VERSION     DBBZXU010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16496
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.038"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..228
                     /locus_tag="ACJJDE_001049"
     CDS             <1..228
                     /locus_tag="ACJJDE_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HGG7540992.1"
                     /translation="HTPFFANYRPQFYFRTTDVTGAVTLEEGVEMVMPGENVTITVEL
                     IAPIAMEEGLRFAIREGGRTVGAGVVSSVIA"
     gene            235..310
                     /locus_tag="ACJJDE_001050"
     tRNA            235..310
                     /locus_tag="ACJJDE_001050"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:268..270,aa:Trp,seq:cca)
     gene            425..703
                     /gene="secE"
                     /locus_tag="ACJJDE_001051"
     CDS             425..703
                     /gene="secE"
                     /locus_tag="ACJJDE_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HGG7540993.1"
                     /translation="MTEHTPEKKNVKVDQLVVQDKESASNSGKEGFFAYFSNSWSEFK
                     KVVWPKREDAVRMTVFVIVFVAVLSIFIYAADTAISWLFFDVLLRREG"
     gene            705..1241
                     /gene="nusG"
                     /locus_tag="ACJJDE_001052"
     CDS             705..1241
                     /gene="nusG"
                     /locus_tag="ACJJDE_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HGG7540994.1"
                     /translation="MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEK
                     VVDIRNGRKTISERKSYPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRANRPTPISQK
                     EAEIILQQVQTGIEKPKPKVEFEVGQQVRVNEGPFADFNGVVEEVNYERNKLRVSVQI
                     FGRETPVELEFSQVEKIN"
     gene            1342..1776
                     /gene="rplK"
                     /locus_tag="ACJJDE_001053"
     CDS             1342..1776
                     /gene="rplK"
                     /locus_tag="ACJJDE_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HGG7540995.1"
                     /translation="MAKKIIGYIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNA
                     ATQGMEPGLPIPVVITAFADKSFTFVMKTPPASILLKKAAGLQKGSSNPLTNKVGKLT
                     RAQLEEIAKTKEPDLTAADLDAAVRTIAGSARSMGLDVEGVV"
     gene            1776..2471
                     /gene="rplA"
                     /locus_tag="ACJJDE_001054"
     CDS             1776..2471
                     /gene="rplA"
                     /locus_tag="ACJJDE_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HGG7540996.1"
                     /translation="MAKVSKRLKALRSSVEANKLYAIDEAIALVKKAATAKFDESVDV
                     SFNLGVDPRKSDQVIRGSVVLPKGTGKTTRVAVFTQGANAEAAKEAGADIVGFEDLAA
                     EIKAGNLNFDVVIASPDAMRIVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VQYRTDKAGIVHATIGRASFAEADLKENFDALLDAIVKAKPAAAKGQYLKKVAVSSTM
                     GLGIRVDTSSVNN"
     gene            2701..3201
                     /gene="rplJ"
                     /locus_tag="ACJJDE_001055"
     CDS             2701..3201
                     /gene="rplJ"
                     /locus_tag="ACJJDE_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HGG7540997.1"
                     /translation="MSLNIETKKVAVEEISAAIANAQTLVVAEYRGISVSSMTELRAN
                     ARKEGVYLRVLKNTLARRAVQGTSFAELADQMVGPLVYAASEDAVAAAKVLHQFAKKD
                     DKIVVKAGSYNGEVMNAAQVAELASIPSREELLSKLLFVMQAPVSGFARGLAALAEKK
                     AGEEAA"
     gene            3259..3630
                     /gene="rplL"
                     /locus_tag="ACJJDE_001056"
     CDS             3259..3630
                     /gene="rplL"
                     /locus_tag="ACJJDE_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HGG7540998.1"
                     /translation="MAITKEDILEAVGSLTVMELNDLVKAFEEKFGVSAAAVAVAGPA
                     GAGAADAEEKTEFDVVLASAGDQKVGVIKVVRAITGLGLKEAKDIVDGAPKTIKEGVS
                     KAEAEDIQKQLEEAGAKVEIK"
     gene            3821..7999
                     /gene="rpoB"
                     /locus_tag="ACJJDE_001057"
     CDS             3821..7999
                     /gene="rpoB"
                     /locus_tag="ACJJDE_001057"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HGG7540999.1"
                     /translation="MSYSFTEKKRIRKSFAKRENVLEVPFLLATQIDSYAKFLQLENA
                     FDKRTDDGLQAAFNSIFPIVSHNGYARLEFVHYTLGEPLFDIPECQLRGITYAAPLRA
                     RIRLVILDKEASKPTVKEVRENEVYMGEIPLMTPSGSFVINGTERVIVSQLHRSPGVF
                     FEHDKGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDLLYFRIDRRRKMPVTILLKALG
                     YNNEQILDIFYDKETFYLSSNGVQTDLVADRLKGETAKVDILDKEGNVLVAKGKRITA
                     KNIRDITNAGLTRLDVEPESLLGKALAADLIDSETGEVLASANDEITEELLAKFDING
                     VKEITTLYINELDQGAYISNTLRTDETAGRQAARVAIYRMMRPGEPPTEEAVEQLFNR
                     LFFSEDSYDLSRVGRMKFNTRTYEQKLSEAQQNSWYGRLLNETFASAADKGGYVLSVE
                     DIVASIATLVELRNGHGEVDDIDHLGNRRVRSVGELTENQFRSGLARVERAVKERLNQ
                     AESENLMPHDLINAKPVSAAIKEFFGSSQLSQFMDQTNPLSEVTHKRRVSALGPGGLT
                     RERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRRVIDG
                     KVTEEIDYLSAIEEGRYVIAQANADLDSDGNLIGDLVTCREKGETIMATPDRVQYMDV
                     ATGQVVSVAASLIPFLEHDDANRALMGANMQRQAVPCLRPEKPMVGTGIERSVAVDSA
                     TAIVARRGGVVEYVDANRVVIRVHDDEATAGEVGVDIYNLVKFTRSNQSTNINQRPAV
                     KAGDVLQRGDLVADGASTDLGELALGQNMTIAFMPWNGYNYEDSILISEKVAADDRYT
                     SIHIEELNVVARDTKLGAEDITRDIPNLSERMQNRLDESGIVYIGAEVEAGDVLVGKV
                     TPKGETQLTPEEKLLRAIFGEKASDVKDTSLRMPTGMSGTVIDVQVFTREGIQRDKRA
                     QSIIDSELKRYRLDLNDQLRIFDNDAFDRIERMIVGQKANGGPMKLAKGSEITTEYLA
                     GLPSRHDWFDIRLADEDLAKQLELIKLSLQQKREEADELYEIKKKKLTQGDELQPGVQ
                     KMVKVFIAIKRRLQAGDKMAGRHGNKGVVSRILPVEDMPYMADGRPVDIVLNPLGVPS
                     RMNIGQILEVHLGWAAKGIGERIDRMLKEQRKAGELREFLNKLYNGSGKKEDLDSLTD
                     EEIIELASNLRKGASFASPVFDGAKESEIREMLNLAYPSEDPEVEKLGFNDSKTQITL
                     YDGRSGEAFDRKVTVGVMHYLKLHHLVDEKMHARSTGPYSLVTQQPLGGKAQFGGQRF
                     GEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYENIVKGEHKIDAGMPESFNVLVK
                     EIRSLGLDIDLERY"
     gene            8155..12330
                     /gene="rpoC"
                     /locus_tag="ACJJDE_001058"
     CDS             8155..12330
                     /gene="rpoC"
                     /locus_tag="ACJJDE_001058"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HGG7541000.1"
                     /translation="MNLLNLFNPLQTAGMEEEFDAIKIGIASPETIRSWSYGEVKKPE
                     TINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRE
                     RMGHIELAAPVAHIWFLKSLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQ
                     LLTEDDYYNKLDEYGDDFDAKMGAEGIRELLRTLNVAGEIEILRQELESTGSDTKIKK
                     IAKRLKVLEAFHRSGMKLEWMIMDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVIN
                     RNNRLKRLLELHAPDIIVRNEKRMLQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIK
                     GKGGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIFHKLEKQGL
                     ASTVKAAKKLVEQEVPEVWDILEEVIREHPIMLNRAPTLHRLGIQAFEPILIEGKAIQ
                     LHPLVCAAFNADFDGDQMAVHVPLSLEAQMEARTLMLASNNVLSPANGEPIIVPSQDI
                     VLGLYYMTRDRINAKGEGSLFADVKEVHRAYHTKQVELGTKITVRLREWVKNEAGEFE
                     PVVNRYETTVGRALLSEILPKGLPFEYVNKALKKKEISKLINASFRLCGLRDTVIFAD
                     HLMYTGFGFAAKGGISIAVDDMEIPKEKAALLAEANAEVKEIEDQYRQGLVTNGERYN
                     KVVDIWGRAGDKIAKAMMDNLSKQKVIDRDGNEVDQESFNSIYMMADSGARGSAAQIK
                     QLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHGARKGLADTALKTANSGYL
                     TRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEALRDRILGRVTASDVVDPSSG
                     ETLVEAGTLLTEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAHCYGRDLARGKLVNAG
                     EAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTARFSSQMRYVANN
                     KGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGMAIKAGQTLATWDPHTRPM
                     ITEHAGMVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSSSASKLLRPTVKLLDEN
                     GVEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGGLPRVA
                     ELFEARVPKDAGMLAEITGTVSFGKETKGKQRLIVTDVDGVAYETLISKEKQILVHDG
                     QVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIRQ
                     MLRRVNIADAGETGFITGEQVERGDVMAANEKALEEGKEPARYENVLLGITKASLSTD
                     SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRHQQWQG
                     VEQETAETQVTDE"
     gene            12622..12879
                     /locus_tag="ACJJDE_001059"
     CDS             12622..12879
                     /locus_tag="ACJJDE_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541001.1"
                     /translation="MKPRNLFFAGCLLTSATFAEDIGVPVELINVGNRIAMPSEGESL
                     ALLPFAEDVPPVRDAMPSEVPKSAAGGDVRGDRMGMPINIG"
     gene            12876..13025
                     /locus_tag="ACJJDE_001060"
     CDS             12876..13025
                     /locus_tag="ACJJDE_001060"
                     /inference="COORDINATES: protein motif:HMM:NF016462.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7541002.1"
                     /translation="MSAALWHKKLSWKGFTPQINFRYNKINSNMPAFYSRSGKERFVS
                     IEKTY"
     gene            13204..13575
                     /gene="rpsL"
                     /locus_tag="ACJJDE_001061"
     CDS             13204..13575
                     /gene="rpsL"
                     /locus_tag="ACJJDE_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003093744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HGG7541003.1"
                     /translation="MPTINQLVRKGRQKPVYVNKVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSL
                     DTAGVKDRKQARSKYGAKRPK"
     gene            13693..14163
                     /gene="rpsG"
                     /locus_tag="ACJJDE_001062"
     CDS             13693..14163
                     /gene="rpsG"
                     /locus_tag="ACJJDE_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008955889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HGG7541004.1"
                     /translation="MPRRREVPKRDVLPDPKFGSVELTKFMNVLMIDGKKSVAERIVY
                     GALEQIEKKTGKVAIEVFNEAIANAKPIVEVKSRRVGGANYQVPVEVRPSRRLALAMR
                     WVRDAARKRGEKSMDLRLAGELIDASEGRGGALKKREEVHRMAEANKAFSHFRF"
     gene            14182..16287
                     /gene="fusA"
                     /locus_tag="ACJJDE_001063"
     CDS             14182..16287
                     /gene="fusA"
                     /locus_tag="ACJJDE_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HGG7541005.1"
                     /translation="MARKTPISLYRNIGISAHIDAGKTTTTERILFYTGLTHKLGEVH
                     DGAATTDYMEQEQERGITITSAAVTSYWSGMAKQFPEHRFNIIDTPGHVDFTVEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYQVPRLAFVNKMDRQGANFFRVVEQMKT
                     RLRANPVPIVIPVGAEDNFSGVVDLLKMKSIIWNEADKGTTFTYGDIPAELVETAEEW
                     RQNMIEAAAEASEELMDKYLGGDELTEEEIVGALRQRTLAGEIQPMLCGSAFKNKGVQ
                     RMLDAVVELLPAPTDIPPVQGVNPNTEEADSRQASDEEKFSALAFKMLNDKYVGQLTF
                     IRVYSGVVKSGDTVLNSVKGTRERIGRLVQMTAADRTEIEEVRAGDIAAAIGLKDVTT
                     GETLCAESAPIILERMEFPEPVIHIAVEPKTKADQEKMGIALNRLAKEDPSFRVRTDE
                     ESGQTIISGMGELHLEIIVDRMKREFGVEANIGAPQVAYRETIRKAVKAEYKHAKQSG
                     GKGQYGHVVIEMEPMEPGGEGYEFIDEIKGGVIPREFIPSVDKGIRDTLPNGIVAGYP
                     VVDVRIRLVFGSYHDVDSSQLAFELAASQAFKEGMRQASPALLEPIMAVEVETPEEYM
                     GDVMGDLNRRRGVVLGMDDDGIGGKKVRAEVPLAEMFGYSTDLRSATQGRATYSMEFK
                     KYSEAPAHIAAAVTEARKG"
     gene            16375..>16496
                     /locus_tag="ACJJDE_001064"
     CDS             16375..>16496
                     /locus_tag="ACJJDE_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7541006.1"
                     /translation="MAKEKFERSKPHVNVGTIGHVDHGKTTLTAALTTILAKKFG"
BASE COUNT         4394 a         3679 c         4266 g         4157 t
ORIGIN      
        1 cataccccgt tcttcgccaa ctaccgtccg caattctact tccgtaccac cgacgtaacc
       61 ggcgcggtta ctttggaaga aggtgtggaa atggtaatgc cgggtgaaaa cgtaaccatc
      121 accgtagaac tgattgcgcc tatcgctatg gaagaaggtt tgcgctttgc gattcgcgaa
      181 ggcggtcgta ccgtgggtgc cggcgtggtt tcttctgtta tcgcttaagt ttagaggcca
      241 atagctcaat tggtagagta tcggtctcca aaaccgaggg ttgggggttc gagaccctct
      301 tggcctgcca aataaaaaat taaccggcct tgtgtcggtt aatttttttg tatttgttat
      361 ttagtaaact ctcttgccat ttacatggat tgagaataga cagatgctat gatggataaa
      421 taatatgaca gaacatacgc ctgaaaaaaa gaacgttaaa gtggatcaac tggttgttca
      481 agataaagaa tctgcatcta attccggtaa ggaagggttt tttgcatatt tctcaaattc
      541 ttggtccgaa ttcaaaaagg tggtttggcc taagcgtgaa gatgctgtca gaatgactgt
      601 atttgttata gtgtttgttg ctgtgctttc tatatttatc tatgcggcag atacagcaat
      661 ttcgtggtta ttttttgatg tattgctgag aagggaaggt tgagatgtcg aaaaaatggt
      721 atgttgtaca ggcgtattcg gggtttgaga agaatgtcca acgaatattg gaagagcgca
      781 ttgcccgtga ggagatggga gattatttcg gacaaattct ggtgcctgta gagaaagttg
      841 ttgatatccg caatggtcgt aagactatta gtgaaagaaa gtcatatcct ggttatgtgc
      901 tagttgagat ggaaatgaca gatgactctt ggcatcttgt aaaaagcacc ccccgtgttt
      961 ccggttttat tggagggagg gctaatagac ctacgccgat tagtcagaaa gaggctgaaa
     1021 ttattttaca gcaggttcag accggcatag agaagccgaa accaaaagtt gaatttgagg
     1081 tcggtcaaca ggttcgtgta aatgaaggcc cgtttgcgga ttttaacggg gtggttgagg
     1141 aggtcaatta tgaacggaat aagttacgcg tgtctgttca gatatttggt agagaaacac
     1201 ccgttgagct ggagttcagc caggttgaaa agattaactg atttttatac ttgaaaaaaa
     1261 agcaataaga ggatagaatc aaaaattaac ttggggagcg gaaatggttc cgcgtcttac
     1321 ccgtttttag gagttcgtta agtggcaaag aaaattatcg gctatattaa actgcaaatt
     1381 cctgcaggta aagccaatcc atctcctccg gttggtcctg ctttgggtca gcgcggtttg
     1441 aatattatgg aattttgtaa ggcatttaat gctgcaaccc aaggtatgga gcctggctta
     1501 ccgattccgg ttgtgattac tgcatttgca gataaatcat tcacatttgt gatgaaaacc
     1561 ccgccagctt ctatcttgtt gaaaaaggct gccggtttgc aaaaaggtag ttctaatcct
     1621 ctgaccaaca aagtgggtaa attgacccgt gcccagttgg aagaaattgc taaaactaaa
     1681 gagcctgatt tgactgctgc tgacttggat gcggctgtcc gtactatagc aggttctgct
     1741 cgctcaatgg gcttggatgt ggagggtgtt gtataatggc taaagtatct aaacgcttga
     1801 aagctcttcg ctcttctgtg gaagccaata aattatatgc aattgatgaa gcaattgctt
     1861 tggtaaaaaa agcagcgact gctaaatttg acgagtctgt tgacgtatct ttcaacttgg
     1921 gcgttgatcc gcgtaaatct gaccaagtta tccgtggttc ggtcgttctg cctaaaggca
     1981 ccggtaagac aacccgtgtg gctgtattta ctcaaggtgc aaatgcagaa gctgctaaag
     2041 aagctggtgc agatatcgtc ggtttcgaag atttggctgc tgaaatcaaa gcaggcaatc
     2101 tgaactttga cgttgttatt gcttctcccg atgcaatgcg tattgttggt caattgggta
     2161 ccatcttggg ccctcgtggt ctgatgccaa accctaaagt aggtacggtt acccctaatg
     2221 ttgccgaagc agtaaaaaat gcaaaagcag gtcaagtgca gtaccgtacc gacaaggcag
     2281 gtattgttca tgcaacgatt ggtcgtgctt cattcgctga agctgatttg aaagagaact
     2341 ttgatgcgtt gctggatgct atcgttaaag ccaagcctgc tgccgctaaa ggtcagtatc
     2401 tgaaaaaagt tgctgtgtct agcaccatgg gtttgggtat tcgcgttgat acatcaagcg
     2461 taaataacta atcttaagga attttcaagc agtttggttt tctgggctgc ttgaatttgg
     2521 gctacttaaa attaagtaga tgtccaagac cgtagggatc gtaagattta atcgtaactg
     2581 ccctacgcag acggtagtcc tgaaacacat tgcaagattg cttgtaagat gtctttttag
     2641 gttaccgcgc tggtgggata tcgttttggt atcctgttta taaacagtgg gaggtagacc
     2701 ttgagtctca atattgaaac caagaaagtg gcggtcgagg aaattagcgc ggcaattgct
     2761 aatgctcaaa ccctcgtagt cgctgaatat cgcggtatca gtgtttccag tatgactgag
     2821 cttcgtgcga atgcacgtaa agaaggcgtt tatttgcgcg ttctgaaaaa tactttggct
     2881 cgtcgtgcag tgcaaggtac ttcatttgca gaattggccg atcaaatggt tggtccgttg
     2941 gtttacgctg cttctgaaga tgctgttgct gctgctaaag tgttgcacca attcgcgaaa
     3001 aaagatgaca aaattgtcgt taaagccggt tcttacaatg gcgaagtaat gaatgctgct
     3061 caggttgctg agttggcttc tattccgagc cgcgaagagc tgttgtccaa actgttgttc
     3121 gttatgcaag ctcctgtatc gggctttgcg cgcggtttgg ctgctttggc agagaaaaaa
     3181 gccggcgaag aagccgctta atcgattttg tttctgttaa tcaattattt tttaatacaa
     3241 tatttggagt aaaatagcat ggctattact aaagaagaca ttttggaagc agttggttct
     3301 ttgaccgtaa tggaattgaa cgacttggtt aaagcttttg aagaaaaatt cggtgtttct
     3361 gctgctgctg ttgcagttgc aggtcctgct ggtgccggtg ctgccgatgc tgaagaaaaa
     3421 accgaatttg atgtcgtttt ggcttctgcc ggcgatcaaa aagtcggcgt gattaaagtt
     3481 gtccgtgcaa ttaccggttt gggtctgaaa gaagctaaag acatcgttga cggtgcacct
     3541 aaaaccatta aagagggtgt ttctaaagct gaagccgaag acatccaaaa acaactggaa
     3601 gaagccggcg ctaaagtcga aatcaaataa tttgatgctt cttatgaagg ctggcagttt
     3661 tctgccagcc ttattttgct tcttaaaata agcattaagt attgtttaca tttatttgca
     3721 tagtttttat caaatcattg caaataaatg taaacatcag attgatgcgt gccgttgctt
     3781 tcagacggcc tattattgaa aattactttt cggagtgtat atgagctatt cgtttaccga
     3841 gaaaaaacgt atccgtaaga gttttgcaaa gcgggaaaat gttttggaag ttcctttcct
     3901 gctggcaacc caaattgatt cttatgcgaa gtttttgcag ctggaaaatg cttttgacaa
     3961 acgtaccgat gacggtctgc aggcggcatt taattctatt ttcccgattg tgagccataa
     4021 cggttatgcg cgattggagt ttgtgcatta cacattgggc gagcctttgt tcgatattcc
     4081 cgaatgtcag ttgcgcggaa tcacttatgc agcccccttg cgcgcgcgta tccgtttggt
     4141 gattttggat aaggaagcat ctaaaccgac ggtaaaagaa gttcgtgaaa acgaagtgta
     4201 tatgggcgaa attccgttga tgaccccgag cggttctttt gtgattaacg gcacagagcg
     4261 tgtgattgtc tcccagttgc accgttcgcc cggtgtattc ttcgagcatg acaaaggtaa
     4321 gacgcactct tccggcaaat tgttattctc cgcccgcatc attccctacc gtggttcatg
     4381 gttggatttt gaatttgatc cgaaagattt gctgtatttc cgtatcgacc gccgccgtaa
     4441 aatgccggta acgattttgt tgaaggcttt gggctacaac aatgagcaaa tcttggatat
     4501 tttctacgac aaagaaacgt tctatttgtc ttcaaacggt gttcaaaccg atttggtcgc
     4561 agaccgtctg aaaggcgaaa ctgccaaggt cgatatcttg gataaagaag gcaatgtatt
     4621 ggttgccaaa ggtaagcgca ttactgcgaa aaatatccgt gatattacca atgcaggcct
     4681 gacccgtttg gatgtagaac cggaaagcct gctgggcaaa gcattggctg ccgatctgat
     4741 tgattcggaa accggcgagg tattggcttc tgccaatgat gaaattacag aagagttgtt
     4801 ggccaaattt gatatcaacg gcgtaaaaga aattacgacc ctttatatca atgagctgga
     4861 tcagggtgct tatatctcca ataccttgcg tacggatgag actgccggcc ggcaggcggc
     4921 tcgtgttgcg atttaccgta tgatgcgtcc gggcgaaccg cccaccgaag aggcggtcga
     4981 gcaattgttt aaccgcttgt tcttcagtga agacagctac gatctgtccc gcgtaggccg
     5041 tatgaaattt aatacgcgca catacgaaca aaaactgtcc gaagcccaac aaaactcttg
     5101 gtacggccgc ctgctgaacg aaacgtttgc cagtgctgcc gacaaaggcg gttatgtcct
     5161 gagcgtcgaa gatattgtcg cctcgattgc gactttggtc gagttgcgta acggccatgg
     5221 cgaagtggac gatatcgatc acttgggcaa ccgccgagta cgttcggtag gcgagctgac
     5281 tgaaaaccaa ttccgtagcg gtttggcccg tgtggaacgt gccgtaaaag aacgtttgaa
     5341 tcaggcggaa tcagaaaact tgatgccgca cgatttgatt aatgcaaaac ctgtttctgc
     5401 cgctattaaa gaattcttcg gctccagcca attgagtcag tttatggatc agaccaaccc
     5461 cttgtctgaa gtaacccata aacgccgcgt atccgcattg ggtccgggcg gtttgacccg
     5521 cgaacgtgca ggatttgagg tgcgggacgt gcatccgacc cactacggcc gcgtatgtcc
     5581 gattgaaacg cctgaaggtc cgaacatcgg tttgatcaac tcattgtccg tttatgcgcg
     5641 caccaatgat tacggtttct tggaaacgcc ttaccgccgc gttatcgacg gcaaagtaac
     5701 cgaggaaatc gattacttgt ctgccatcga agaaggccgc tatgtgattg cacaggcgaa
     5761 tgccgatttg gattcagatg gcaatctgat tggcgatttg gttacctgtc gtgaaaaagg
     5821 cgaaaccatt atggcaacgc ccgaccgcgt ccaatatatg gacgtggcaa ctggtcaagt
     5881 ggtatccgtt gcagcatccc tgattccgtt cttggaacat gatgacgcga accgcgcatt
     5941 gatgggtgcc aacatgcaac gtcaggcagt gccttgcctg cgtcctgaaa aaccgatggt
     6001 cggtaccggt atcgagcgtt ccgttgccgt tgactctgct actgcaatcg ttgcccgccg
     6061 aggcggcgtg gtcgagtatg tcgatgccaa ccgtgttgtg attcgtgtcc atgacgacga
     6121 agcgactgcc ggcgaagtgg gtgtcgatat ttacaacttg gtcaaattca cccgttccaa
     6181 ccaatctacc aacatcaacc aacgtccggc cgtcaaagcc ggcgatgtgt tgcagcgcgg
     6241 cgatttggtg gccgacggcg cgtccaccga tttgggcgaa ttggctttgg gtcaaaatat
     6301 gaccatcgcc ttcatgccgt ggaacggtta caactacgaa gactcgattc tgatttccga
     6361 aaaagtggct gcggacgacc gctatacttc gattcacatt gaggaattga atgtcgttgc
     6421 ccgcgatacc aagctgggcg cggaagacat tacccgcgat attccgaact tgtccgaacg
     6481 tatgcaaaac cgtttggatg aatccggtat cgtatatatc ggtgcagaag tagaagccgg
     6541 cgatgtgctg gtaggtaaag taacgcccaa aggcgaaacc caactgactc ctgaagaaaa
     6601 actgctgcgc gccatcttcg gcgaaaaagc gtctgacgta aaagatactt cattgcgtat
     6661 gcctaccggt atgagcggta cggttatcga cgttcaagtc ttcactcgtg aaggcatcca
     6721 acgcgacaaa cgtgctcaat ccattatcga ttccgagttg aaacgctacc gtttggattt
     6781 gaacgaccaa ttgcgtattt tcgacaacga cgcattcgac cgtatcgagc gtatgattgt
     6841 cggtcagaaa gccaacggcg gcccgatgaa gctggccaaa ggcagtgaaa tcacgaccga
     6901 atatctggcg ggtctgccga gcaggcacga ttggttcgat atccgtctgg ctgatgaaga
     6961 tttggccaaa cagttggaac tgattaaatt gagcctgcaa caaaaacgcg aagaagcgga
     7021 tgagttgtat gagatcaaga agaaaaaact gacccaaggc gacgagctgc aaccgggcgt
     7081 acaaaaaatg gtgaaagtat ttatcgccat caaacgccgt ctgcaagccg gcgacaaaat
     7141 ggcgggccgc cacgggaaca aaggcgtggt atcgcgcatt ctgccggtgg aagatatgcc
     7201 ttacatggct gacggccgtc cggtagacat cgtactgaac ccgttgggcg taccttcccg
     7261 tatgaacatc ggtcagattt tggaagttca cttgggttgg gcggcaaaag gtatcggcga
     7321 acgcatcgac cgtatgctga aagagcaacg caaagcaggc gagctgcgcg aattcttgaa
     7381 caaactctac aacggcagcg gtaagaaaga agatttggac agcctgacag atgaagaaat
     7441 catcgaattg gcttccaacc tgcgcaaagg cgcatctttc gcctctcctg tattcgacgg
     7501 tgcgaaagag tctgaaatcc gcgaaatgtt gaacttggct tacccaagcg aagatcctga
     7561 ggttgagaaa ctgggcttca acgacagcaa aacccaaatc acgctgtatg acggccgttc
     7621 aggcgaagca tttgaccgca aggttacagt aggtgtgatg cactatctga aactgcacca
     7681 cttggttgac gaaaaaatgc acgcccgttc taccggtccg tacagtctgg ttacccaaca
     7741 gcctttaggc ggtaaagctc agttcggtgg ccaacgtttc ggcgagatgg aggtttgggc
     7801 attggaagca tacggcgcgg catacacgtt gcaagagatg ctgactgtga agtctgacga
     7861 cgtgaacggc cgtaccaaaa tgtacgaaaa tatcgtcaaa ggcgaacaca aaatcgatgc
     7921 cggtatgcct gaatccttca acgtattggt taaagagatt cgctcactgg gcttggatat
     7981 cgatttggaa cgttactaaa cagaagtttt cagacggcct ttcaaggtcg tctgaaaagc
     8041 ggtttcagaa taagaatgaa gcaatcggca tttaggccgt ctgaaatcga aagtaccgtt
     8101 tcccaatatc gaaaatccgc catgcggtaa aaatacttcc ttcaaggagc aaaaatgaat
     8161 ttgttgaact tatttaatcc gttgcaaact gccggcatgg aagaagagtt tgatgccatc
     8221 aaaatcggta ttgcctctcc cgaaaccatc cgctcatggt cttatggcga agttaaaaaa
     8281 cctgaaacca tcaactaccg tacgttcaaa cctgagcgtg acggtttgtt ctgtgccaaa
     8341 atctttggcc cggtcaaaga ctacgaatgc ttgtgcggaa aatacaaacg cttgaaattt
     8401 aaaggcgtaa cgtgtgaaaa atgcggcgtg gaagtaaccc tgtccaaagt gcgccgcgaa
     8461 cgcatgggcc atatcgaatt ggctgcgccc gtcgcacata tttggttctt aaaatccctg
     8521 ccttcccgct tgggtatggt gttagacatg actttgcgcg atatcgaacg cgtattgtac
     8581 tttgaagcat ttgtggtaac cgatcccggt atgactccgc tgcaacgccg ccaattgctg
     8641 actgaagacg attactacaa caagctggac gaatacggcg acgacttcga tgccaaaatg
     8701 ggtgcagaag gtatccgcga attgctgcgt accttgaatg tagcaggcga aatcgaaatc
     8761 ctgcgccaag agttggaatc gactggttcc gacaccaaaa tcaaaaaaat cgccaaacgc
     8821 ttgaaagtat tggaagcctt ccatcgttcc ggtatgaaac tggaatggat gattatggat
     8881 gtgctgccgg tattgccgcc tgatttgcgt ccgttggttc cattggatgg tggtcgtttt
     8941 gccacttccg atttgaacga tttgtaccgc cgcgttatta accgtaacaa ccgtctgaaa
     9001 cgtctgttgg aactgcacgc gcctgacatc atcgtccgca acgaaaaacg tatgttgcaa
     9061 gaagcagttg actcgctgtt ggataacggc cgtcgcggta aagccatgac cggcgccaac
     9121 aaacgcccgc tgaaatcatt ggcagacatg attaaaggta aaggcggtcg cttccgtcaa
     9181 aacctgttgg gcaaacgtgt ggactactcc ggccgttccg tgattaccgt aggcccatac
     9241 ctgcgtctgc accaatgcgg tctgccgaaa aaaatggctt tggaactgtt caaaccgttc
     9301 attttccaca aattggaaaa acaaggtttg gcctctaccg ttaaagcagc gaaaaaattg
     9361 gtagagcaag aagtaccgga agtatgggac atcttggaag aagtcatccg cgaacatccg
     9421 attatgctga accgtgcgcc gaccctgcac cgtttgggta ttcaagcgtt cgaacctatc
     9481 ttgattgaag gtaaagcgat tcagttgcac ccattggtgt gtgctgcgtt caacgccgac
     9541 tttgacggcg accaaatggc ggtacacgtt ccattgagct tggaagcaca aatggaagca
     9601 cgcacgctga tgctggcttc aaacaacgta ttgtctcctg ccaacggcga accgattatc
     9661 gtaccttccc aagacatcgt attgggcctg tactacatga cccgcgaccg tatcaatgcc
     9721 aaaggcgagg gcagcctgtt tgccgatgtg aaagaagtgc atcgcgcata ccataccaaa
     9781 caggttgaac tgggtacgaa aattaccgta cgtctgcgcg aatgggtgaa aaacgaagca
     9841 ggtgagtttg agcctgtcgt taaccgttac gaaacaaccg tcggccgtgc attgttgagc
     9901 gaaatcctgc cgaaaggcct gccgtttgaa tatgtcaaca aagcgttgaa gaaaaaagaa
     9961 atttctaaac tgattaacgc atcgttccgc ctgtgcggct tgcgcgatac ggttatcttt
    10021 gctgaccacc tgatgtacac cggtttcgga tttgcggcaa aaggcggtat ttccattgcc
    10081 gttgacgata tggaaattcc aaaagaaaaa gcggccttgc tggctgaagc caatgccgag
    10141 gttaaagaaa tcgaagacca ataccgtcaa ggtttggtta ccaacggcga acgctacaac
    10201 aaggtggtcg atatttgggg tcgtgccggc gataagattg ctaaagcgat gatggacaac
    10261 ttgtccaaac aaaaagttat cgaccgtgac ggcaacgaag tcgatcaaga gtcattcaac
    10321 tccatttata tgatggcgga ctccggtgcc cgtggttctg cagctcagat taaacagttg
    10381 tccggtatgc gtggcttgat ggctaaacct gacggctcga ttattgaaac gccgattacc
    10441 tcaaacttcc gtgaaggtct gaccgtattg caatacttta ttgcgaccca cggtgcgcgt
    10501 aagggtttgg cggataccgc attgaaaacc gcgaactccg gttacctgac tcgtcgtctg
    10561 gtagacgtaa ctcaagattt ggtcgttgtt gaagacgatt gcggtacttc agacggcttt
    10621 gtcatgaagg cagtggtaca aggcggtgat gtgattgaag cattgcgcga tcgtattttg
    10681 ggtcgtgtta ccgcgtctga cgttgtcgat ccgtcaagtg gcgaaacctt ggttgaagcc
    10741 ggtacgttgc tgactgaaaa actggtggat atgatcgacc aatccggtgt cgatgaagtc
    10801 aaagtccgta cgccgattac ttgtaaaacc cgtcacggcc tgtgtgcaca ctgttacggt
    10861 cgtgacttgg cacgcggcaa actggttaac gccggtgagg cagtcggtgt gattgctgca
    10921 caatccattg gcgaaccggg tacccagttg accatgcgta cgttccacat cggtggtgcg
    10981 gcatcccgtg cggcagcagc cagccaagtg gaagccaaat ccaacggtac ggcacgattc
    11041 agcagccaga tgcgctatgt tgccaacaac aaaggcgagt tggttgtcat cggccgttct
    11101 tgtgaagtcg tgattcacga cgatatcggc cgtgaacgcg aacgccacaa agtaccttac
    11161 ggtgccatcc tgctggtaca agacggtatg gccattaaag ccggtcaaac cttggcaacc
    11221 tgggatccgc atacccgtcc gatgattacc gaacacgcag gtatggtgaa attcgaaaac
    11281 gtggaagagg gtgtaaccgt tgccaaacaa actgacgatg taaccggttt gtccactttg
    11341 gtggtgattg acggtaaacg ccgttccagc agcgcgtcca aactgctgcg tccgactgta
    11401 aaattgttgg atgaaaacgg cgtggaaatc tgtattcccg gtacgtccac tccggtttcg
    11461 atggcattcc ccgttggtgc ggtgattacc gtacgcgaag gtcaggaaat cggtaaaggc
    11521 gacgtattgg cgcgtatccc gcaagcctct tccaaaaccc gcgacattac cggtggtctg
    11581 ccgcgcgttg ccgaattgtt tgaagcacgc gtgccgaaag atgccggtat gttggcggaa
    11641 attaccggta ccgtttcctt cggcaaagag accaaaggca agcaacgtct gattgttact
    11701 gacgtggacg gtgtagcata cgagaccttg atttccaaag agaaacaaat tctggtacac
    11761 gacggtcaag tggtaaaccg cggtgaaacc atcgtggacg gcgcggtcga tccgcacgat
    11821 attctgcgtt tgcaaggtat cgaagcactg gcacgctaca ttgtccaaga ggtgcaagag
    11881 gtttaccgtc tgcaaggtgt gaagatttct gataaacaca tcgaagtcat catccgtcaa
    11941 atgttgcgcc gtgtgaacat tgcggatgcc ggcgaaaccg ggttcattac cggagagcag
    12001 gtcgaacgcg gcgatgtgat ggcggccaat gaaaaagcgt tggaagaagg caaagaaccg
    12061 gcgcgttacg aaaacgtatt gctgggtatt accaaagctt ccctgtctac cgacagcttc
    12121 atttctgctg catcgttcca agaaacgacc cgtgttctga ccgaagccgc gattatgggc
    12181 aaacaagacg aactgcgcgg tttaaaagag aacgtcatcg tcggccgcct gattcctgcc
    12241 ggtaccggtt tgacttatca ccgcagccgt catcagcaat ggcaaggggt agagcaggag
    12301 actgctgaaa cccaagtaac ggatgaataa tcttcggcgc gtttattcaa tacaaaaccg
    12361 caagctttaa gcttgcggtt tttctttgtc cgattaaggc aaaaacaagc gttttcgtca
    12421 ttttgaggcg tgtggattat tccttaggta ttttcgggcc ggagaccaac gaggtggcgg
    12481 gtgtcgtcgg tacgtccgga gaccaaaata actttgccag ggatgttggt ttcggcggtc
    12541 aaaaaaagta gcgtcttaat gttttccatt taaacaaatg tcgtctgaaa cttcagacgg
    12601 catttccttt aaaaaataaa tatgaaaccc agaaatctct tttttgcagg ctgcctgctg
    12661 acttcggcga cgtttgccga ggatatcggc gtacctgtcg aactgattaa cgtcggtaat
    12721 cggattgcga tgccgtctga aggggaaagc ctcgccctcc tgccgtttgc cgaggatgta
    12781 ccgccggttc gcgatgcaat gccgtctgaa gttcctaaaa gcgcggcagg cggcgatgtt
    12841 cggggtgacc ggatgggaat gccgattaac atcggatgag cgcggcttta tggcataaaa
    12901 aactgtcgtg gaaaggattt acaccccaaa taaatttccg ttacaacaag atcaacagca
    12961 atatgcccgc cttttattcg cgcagcggca aggaacggtt tgtcagtata gaaaaaacgt
    13021 attgacagta ttttcttcag tcgtccgact gattgtgagg gatgtcggta aatatttatc
    13081 ggcaaacaag aaaatcatct ttcttcttgt cgttatgctt gactgtatac ttgcaataaa
    13141 aatataattc cactcttgcc gacatggtgt cggcaagtat ttaactcaac aggacgagaa
    13201 aatatgccaa ctatcaacca attggtacgc aaaggccgtc aaaagcccgt gtacgtaaac
    13261 aaagtgcccg cactggaagc ctgcccgcaa aaacgcggcg tgtgcacccg tgtatacacg
    13321 actaccccta aaaaacctaa ctctgcattg cgtaaagtat gtaaagtccg cctgaccaac
    13381 ggttttgaag tcatttcata catcggcggc gaaggccaca acctgcaaga gcacagtgtc
    13441 gtattgattc gcggcggtcg tgtaaaagac ttgccaggtg tgcgttacca cactgtacgc
    13501 ggttctttgg atactgcagg tgttaaagac cgtaaacaag cccgttccaa atatggtgct
    13561 aagcgtccta aataattact gggacttaaa taggcacgtc ggccgcctaa gcagaacaac
    13621 ggccgagtaa gtgaatactc aattgggtat tcatgggaat agacccgact gaatagatta
    13681 aaggaaatta aaatgccaag acgtagagaa gtccccaagc gcgacgtact gccagatcct
    13741 aaattcggca gcgtcgagtt gaccaaattc atgaacgtat tgatgattga cggtaaaaaa
    13801 tccgttgccg agcgtatcgt ttacggtgcg ttggaacaga ttgagaaaaa aaccggcaaa
    13861 gtagcaatcg aagtatttaa cgaagccatt gcaaacgcca aacctatcgt ggaagtgaaa
    13921 agccgccgtg taggtggtgc aaactaccaa gttcctgttg aagttcgtcc ttcacgccgt
    13981 ttggctttgg caatgcgctg ggttcgcgat gcggcccgca aacgtggtga gaaatccatg
    14041 gacctgcgtt tggcaggcga attgattgat gcgtccgaag gccgtggcgg tgcgttgaaa
    14101 aaacgtgaag aagtacaccg tatggctgaa gccaacaaag cattctctca cttccgtttc
    14161 taattttgaa aggctaataa aatggctcgt aagaccccga tcagcctgta ccgtaacatc
    14221 ggtatttccg cccatatcga tgcgggtaaa accacgacga cagaacgtat tttgttctat
    14281 accggtttga cccacaagct gggcgaagtg catgacggtg cggctactac cgactacatg
    14341 gaacaagagc aagagcgcgg tattaccatt acctccgctg ccgttacttc ctactggtcc
    14401 ggtatggcga aacaattccc cgagcaccgc ttcaacatca tcgacacccc gggacacgtt
    14461 gactttaccg tagaggtaga gcgttctatg cgtgtattgg acggcgcggt aatggtttac
    14521 tgcgcggtgg gcggtgttca accccaatct gaaaccgtat ggcggcaagc caacaaatac
    14581 caagtgccgc gcttggcgtt tgtcaataaa atggaccgtc agggtgccaa cttcttccgc
    14641 gttgtcgagc aaatgaaaac ccgtttgcgc gcaaaccctg tacctatcgt cattccggtt
    14701 ggtgcggaag acaacttcag cggtgtggtt gatttgttga aaatgaaatc catcatttgg
    14761 aatgaagccg ataaaggtac aacctttacc tatggcgata ttcctgccga attggtcgaa
    14821 actgccgaag aatggcgtca aaatatgatt gaagccgcag ccgaagccag cgaagaactg
    14881 atggacaaat acttaggcgg cgacgagctg accgaagaag aaatcgtagg cgcgttgcgt
    14941 caacgtactt tggcaggcga aattcagcct atgctgtgtg gttctgcatt taaaaacaaa
    15001 ggtgttcaac gtatgttgga cgcagttgta gaattgctgc cagctcctac cgatattcct
    15061 ccggttcaag gtgtcaaccc gaataccgag gaagccgaca gccgtcaagc cagcgatgaa
    15121 gagaaattct ctgcattggc gttcaaaatg ttgaacgaca aatacgtcgg tcagctgacc
    15181 tttatccgcg tttactcagg cgtagtaaaa tccggcgata ccgtattgaa ctccgtaaaa
    15241 ggcactcgcg aacgtatcgg tcgtttggta caaatgactg ccgcagaccg tactgaaatc
    15301 gaagaagtac gcgccggcga catcgcagcc gctattggtc tgaaagacgt tactaccggt
    15361 gaaaccctgt gtgcggaaag cgcgccgatt atcttggaac gtatggaatt ccccgagccg
    15421 gtaatccata ttgccgttga gccgaaaacc aaagccgacc aagagaaaat gggtatcgcc
    15481 ctgaaccgct tggctaaaga agacccttct ttccgtgtcc gtacagacga agaatccggt
    15541 caaaccatta tttccggtat gggtgagctg cacttggaaa ttattgttga ccgtatgaaa
    15601 cgcgaattcg gtgtggaagc aaatatcggt gcacctcaag tggcttaccg tgaaactatc
    15661 cgcaaagccg ttaaagctga atacaaacat gcaaaacaat ccggtggtaa aggtcaatac
    15721 ggtcacgttg tgattgaaat ggaacctatg gaaccgggtg gtgaaggtta cgagtttatc
    15781 gatgaaatta aaggtggtgt gattcctcgc gaatttattc cgtctgtcga taaaggtatc
    15841 cgcgatacgt tgcctaacgg tatcgttgcc ggctatcctg tagttgacgt acgtatccgt
    15901 ctggtattcg gttcttacca tgatgtcgac tcttcccaat tggcatttga attggctgct
    15961 tctcaagcgt ttaaagaagg tatgcgtcaa gcatctcctg ccctgcttga gccgattatg
    16021 gcagttgaag tggaaactcc ggaagaatac atgggcgacg taatgggcga cttgaaccgc
    16081 cgtcgcggtg ttgtattggg tatggatgat gacggtatcg gcggtaaaaa agtccgtgcc
    16141 gaagtacctc tggcagaaat gttcggttat tcgaccgacc tgcgttctgc aacccaaggc
    16201 cgcgctactt actctatgga gttcaagaaa tattctgaag ctcctgctca catagctgct
    16261 gctgtaactg aagcccgtaa aggctaatca ggcaaatagg ccgtccgaaa ggctgaaatg
    16321 atttttcaga cggcattgtt ctttaatcga tctttaatgt aaaggaatta gctcatggct
    16381 aaggaaaaat tcgaacgtag caaaccgcac gtaaacgttg gcaccatcgg tcacgttgac
    16441 catggtaaaa ccaccctgac tgccgctttg actactattt tggctaaaaa attcgg
//
LOCUS       DBBZXU010000039        16263 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.039, whole genome shotgun sequence.
ACCESSION   DBBZXU010000039 DBBZXU010000000
VERSION     DBBZXU010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 16263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.039"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            153..389
                     /locus_tag="ACJJDE_001065"
     CDS             153..389
                     /locus_tag="ACJJDE_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541007.1"
                     /translation="MRILDIFKNPATGNVSHSKLWANVACAAGTFKFVMLPDPSAEIW
                     AVYLGIVGGYAVARSFVSVKRQEVENESRETAGE"
     gene            361..780
                     /locus_tag="ACJJDE_001066"
     CDS             361..780
                     /locus_tag="ACJJDE_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541008.1"
                     /translation="MNLVKLLANNWQPIAIIALVGTGLAVSHHQGYKAAFAKQQAVID
                     KMEHDKAQALLLSAQNYARELELARAEAKKYEVKAHAVGMALAKKQAEVSRLKTENKK
                     EIENVLTQDRKNAGGGCIDGFGHHGLQLYKRALGYGN"
     gene            677..982
                     /locus_tag="ACJJDE_001067"
     CDS             677..982
                     /locus_tag="ACJJDE_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541009.1"
                     /translation="MSLLKTVKMQAAVVLTALAITACSSTSAPSATEIKVVEKAVMPT
                     PPAALMVAPVRPNPPKDGKTATLLEHAAEFGGYVAELENQNQAWRDWAGNHSRKVGN"
     gene            complement(1027..1197)
                     /locus_tag="ACJJDE_001068"
     CDS             complement(1027..1197)
                     /locus_tag="ACJJDE_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HGG7541010.1"
                     /translation="MYFEIYKDAKGEYRWRLKAANHEIIAQGEGYTSKQNCQHAVDLL
                     KSTTAATPVKEV"
     gene            1210..1428
                     /locus_tag="ACJJDE_001069"
     CDS             1210..1428
                     /locus_tag="ACJJDE_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541011.1"
                     /translation="MNEYTFSYRFNGKSWSLSIWADNPEEARAKFRAARENAHYDGEV
                     VAKVYTFVNISWVKKLYKRTKYLMGIKE"
     gene            1425..1763
                     /locus_tag="ACJJDE_001070"
     CDS             1425..1763
                     /locus_tag="ACJJDE_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541012.1"
                     /translation="MTYRELVERQLAVRHADLELGLSRAREQEPFVIHVSDLLDKAGI
                     EYAVRMDKDFQTTFHLEYPITNYDTFKRAVWQTLGAYYCVCNDGDGLEIASNRPDGYA
                     VRIVFGDVPV"
     gene            1775..2041
                     /locus_tag="ACJJDE_001071"
     CDS             1775..2041
                     /locus_tag="ACJJDE_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541013.1"
                     /translation="MDFEFGFRTLWPIATAAFWFWVNGISGRLKEADKRIDDLKEELH
                     AVKLSYHTKADAKADSTNIAAALERIENKLEKVNEKLDRKADKS"
     gene            2038..2235
                     /locus_tag="ACJJDE_001072"
     CDS             2038..2235
                     /locus_tag="ACJJDE_001072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541014.1"
                     /translation="MSDPILEALARIENKTDQTLKNQKEMQAEIAQIRQDTKRTAITF
                     GALGGGVITVGWELLKAKMGL"
     gene            2238..2744
                     /locus_tag="ACJJDE_001073"
     CDS             2238..2744
                     /locus_tag="ACJJDE_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1804 family protein"
                     /protein_id="HGG7541015.1"
                     /translation="MAHPQEIREKLRRLYVSGEQTLETAALMCEIPQTTARAWKRADK
                     EKGDDWDKMRAAYTLAGGGIEDLSRAMLAGFMVQYNSTMTMLQDSSTEDLPPSDRAKL
                     LASLADAFTKTVSANARVMPETSKLATALELIEFLMAFVQEKHPKHLPAFVEVLEPFG
                     AEVEKKFG"
     gene            complement(2741..3253)
                     /locus_tag="ACJJDE_001074"
     CDS             complement(2741..3253)
                     /locus_tag="ACJJDE_001074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541016.1"
                     /translation="MTGFISNAFIGLKEAGSLLKGFNQLKTEAEVAQKTIELNQIIAG
                     IQTDLFEAQSSYTAAISRIDELEKELVAVKNWSTEKQRYQLYELAPGSFVYRLKTEMA
                     NSEPIHDICPQCYEQGVKSILQFNGYEGAFHKYSCSRCQTIILGERLKSDVEVFSVGG
                     SRYGRLIDGY"
     gene            3265..4887
                     /gene="terL"
                     /locus_tag="ACJJDE_001075"
     CDS             3265..4887
                     /gene="terL"
                     /locus_tag="ACJJDE_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HGG7541017.1"
                     /translation="MKTKEFLKSLAELAASLRQVIEAEVDGFDASPKAVSARRAKVFD
                     PIGGYEYFVNTYFPHYIRSPEKSELHAFLFSRLPEIIRSPKGENEAVGAPRGEGKSTQ
                     VTQLFTLWCIVTGQKHYAVIVMDSIDQAYPMLEAIKAELEFNPRLKTDFPEVCGQGRV
                     WQAGTIVTANDVKVQVAGSGKKLRGLRHGPYRPDLTVLDDIENDEQVRNPEQRDKLNA
                     WLTKTVLPLGGVGQKYDVIYIGTILHYDSVLNRTLNNPFWRGVKFKAMKRWPDRMDLW
                     DRWEELFRNDGETVAEAFYQANKDEMERGAVTSWAARGVLALMKIRARDGHATFDSEY
                     QNDPVSGEDAPFAKSMKFWNDLPSDLVYFGALDPSLGKAGASRDPSAIVIGGYQRSMG
                     RLYVVEAQIKKRLPDLIIEDVICLHRQYRCKLWFVETVQFQEFLKDELVKRSAARGIP
                     VPARAVKPVSDKLLRIETLQPHMANGLILLNESQQTLIQQFRHFPKADHDDGPDAVHM
                     LWSGAVANCVPIEWQSPTDNDFGNEIKSKWSR"
     gene            4887..6455
                     /locus_tag="ACJJDE_001076"
     CDS             4887..6455
                     /locus_tag="ACJJDE_001076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF935 domain-containing protein"
                     /protein_id="HGG7541018.1"
                     /translation="MAKKDNKTKIQKPEAALQTDAAQITATGRVIAEHPSNFITPQKM
                     RALFEDAESGDIRAQHELFADIEERDSDIAANMGTRKRALLTLNWRVAPPRNATPEEE
                     KLSDQAYEMMDSLPTLEDLIMDLMDAVGHGFSALEVEWVFSDGLYLPRNFIHRPQSWF
                     KWDKDDGLLLRTRENPEGEALWPLGWVVHTQKSRSVRQARNGLFRSLSWLYMFKHYAV
                     HDFAEFLELYGMPIRIGKYGAGATKEEKNTLLRAVAEIGHNAAGIMPEGMEIELHNAA
                     SGTTATSNPFLQMADWCEKSAARLILGQTLTSGADGKSSTNALGNIHNEVRRDLLVSD
                     AKQVAQTITSQIIGPFLQINYPHADPNRVPKFEFDTREPKDIAVFADAIPKLVDVGVQ
                     IPESWVRDKLVIPDVQEGEAVLVRQVPDNPVNRTTLAALSAHTVPSKATGRHQEILDG
                     ALDDALVEPDFNSQLNPMVRQAVAALNACNSYEEADAALNALYPNLDNAKLRTYMQQA
                     LFISDILGQDHARA"
     gene            6442..7737
                     /locus_tag="ACJJDE_001077"
     CDS             6442..7737
                     /locus_tag="ACJJDE_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HGG7541019.1"
                     /translation="MPAPDLGFALSLPPKKAIEWLESKKVTAESYRNLTASEIAKVYT
                     IARMTDLDMLNDIKTSMVESAKSGQSFDDWRKGILNLLSNKGWLHPNGHNGKDIIDPA
                     TGEVFGSPRRLETIYRTNMQTAYNAGQYQGYMANIDARPYWMYDAVGDSRTRPAHSAI
                     DGLVYRYDDPFWATFYPPNGYNCRCSVIALSERDVERQGRIVGQSTADNLVETHKIYN
                     KKGDSYPTTAYKAPDGSLYTADKGFGYNAGRMNYRPDLDKYDRALAHQFAKAEMGGAD
                     FKTSFKQLEKEFYEVKQRLDIDGKPDKEQKIKIRNALSRQLKFAAGVLSKETQELAGM
                     TRATVWLSDDTLVKQVDSREGQNFDDSYYAFLPDMLQNPEHVIRDNRELIFTARYKGS
                     ALWAVLKYIKEVDEIYLQSYRISNDKEIAKFMAKKKVLK"
     gene            7847..8263
                     /locus_tag="ACJJDE_001078"
     CDS             7847..8263
                     /locus_tag="ACJJDE_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016032 - viral process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HGG7541020.1"
                     /translation="MIDVKIDNIFVVLNQIERLGNGIENRYLLMRRLSETMHTAVKLN
                     FRYAGRPKWLGLKYRDGKPLSDSGRLKDSFSTLSDNDTALVGTNIVYAAIHNFGGMAG
                     RNRKVRIPQREFLTLTDDDKQALMDDVQDYFSGLIP"
     gene            8494..9555
                     /locus_tag="ACJJDE_001079"
     CDS             8494..9555
                     /locus_tag="ACJJDE_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage protease"
                     /protein_id="HGG7541021.1"
                     /translation="MSKNAQKTLLAVCSFEVQPKDGRIQLLPYGEFRAVDGRPTDVPA
                     WYLTEENGHDVALLANSSRNQLVVDYEHQTLYKEKNGQPAPAAGWMRWLEFTPKGMFA
                     EVEWTDKAAAAIAAKEYRYISAVFSYDTKGYVSKIFHAALTNFPALDGMDEVLAAASA
                     QILKPETEQNPMKELLQQLFGLPDAGEEELKAALSALVEAKPEGAALSADVFAQLAEK
                     DSRIAALSAQNGTPDLTRYAPVSLVRDLQNQVAALTAEREADKGGELITAALSAGKLL
                     PAQKEWAEGVLKQPGGFAFLSGFIENAQPVAALAGSQTGGKAPDERVAALTAEEAAAA
                     KMLGMSGEEFVKIKESEGK"
     gene            9617..10126
                     /locus_tag="ACJJDE_001080"
                     /pseudo
     CDS             9617..10126
                     /locus_tag="ACJJDE_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217232.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            10116..11261
                     /locus_tag="ACJJDE_001081"
     CDS             10116..11261
                     /locus_tag="ACJJDE_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein"
                     /protein_id="HGG7541022.1"
                     /translation="MQNNSYGYAVSVRVGGKEHRHWERYDIDSDFLIPADSFDFVIGR
                     LGPEAAIPDLSGESCEVVIDGQIVMTGIIGSQRHGKSKGSRELSLSGRDLAGFLVDCS
                     APQLNVKGMTVLDAAKKLAAPWPQIKAVVLKAENNPALDKIDIEPGETVWQALTHIAN
                     SVGLHPWLEPDGTLVVGGADYSSPPVATLCWSRTDSRCNIERMDIEWDTDNRFSEVTF
                     LAQSHGRSGDSAKHDLKWVYKDPTMTLHRPKTVVVSDADNLAALQKQAKKQLADWRLE
                     GFTLTITVGGHKTRDGVLWQPGQRVHVIDDEHGIDAVFFLMGRRFMLSRMDGTQTELR
                     LKEDGIWTPDAYPKKAEAARKRKGKRKGVSHKGKKGGKKQAETAVFE"
     gene            11258..11926
                     /locus_tag="ACJJDE_001082"
     CDS             11258..11926
                     /locus_tag="ACJJDE_001082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0044423 - virion component [Evidence
                     IEA];
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0019068 - virion assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HGG7541023.1"
                     /translation="MSLSKLAKKTAQTAKNIGETLRTAFRGKITLVVSSEPIQRVQLS
                     GLADETLQDLEHLQEYGFASHPPDGSEAVVIPLGGNTSHGVIVCSQHGSYRIKNLKPG
                     ETAIFNHEGAKIVIKQGKIIEADCDVYRVNCKQYEVNAATDAKFNAPLVETSAVLTAQ
                     GQINGNGGMAVEGGDGATFSGDVNQTGGSFNTDGDVVAGNISLRQHPHTDSIGGKTLP
                     AEPA"
     gene            12027..12374
                     /locus_tag="ACJJDE_001083"
     CDS             12027..12374
                     /locus_tag="ACJJDE_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage GP46 family protein"
                     /protein_id="HGG7541024.1"
                     /translation="MDKELNPSIGDYTGRTVDTLQNAVYIRLMTPLGSWWADKTLGSL
                     LHLLQREKDLQRVSLLAEQYADEALQPIVKSGRADKITVRAEQPHDGRLILHIRVDTA
                     AGGFDYRHEVPVI"
     gene            12388..13443
                     /locus_tag="ACJJDE_001084"
     CDS             12388..13443
                     /locus_tag="ACJJDE_001084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004284601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HGG7541025.1"
                     /translation="MFETPTFEQIRERILRDTKSLWPDADISPDSDHYVHASRLASCA
                     EGQYAHQSWIVRQIFPDTADREYLERHASMRGLRRRNPTTASGTLTVSGIAQSMLSDG
                     LQVRIGQRFYRTTARAVIGSGGTAEIPAIADELGAAANVRDGEAQLMAAPAGVSTECR
                     LTVQGGTDRESDASLLARLLEIIRRPPAGGNRYDYKNWALSVDGVTSAYVYPLRRGLG
                     TVDIAITSADGVPSEETVRRVQAYIDEMRPVTAKNALVLKPTVTAVPVTVQVKLDGID
                     LDDAKRRIRTALKEYFDTLIPGDGLTVSQIEAAISNVDGVIDRRLTAPTANRAADTVN
                     RIEWFKAGAINVTEMPS"
     gene            13440..14000
                     /locus_tag="ACJJDE_001085"
     CDS             13440..14000
                     /locus_tag="ACJJDE_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmfQ family protein"
                     /protein_id="HGG7541026.1"
                     /translation="MSYQDILRGLLPPVSYARNAPRVRAQAEIDGAALDAVAESAQSV
                     ADAVDPSSAGQMLADWERVLGLDGTGKNRQRRVLAVMAKLNETGGLSIPYFVRLAEAA
                     GYQIQIDEPQPFRAGVNRAGDRLAPQEIMWVWHVNVRGGNNRITRFRAGISAAGDRLT
                     DYSDAVIESLFNRLKPAHTAIRFTYR"
     gene            14011..15984
                     /locus_tag="ACJJDE_001086"
     CDS             14011..15984
                     /locus_tag="ACJJDE_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyocin knob domain-containing protein"
                     /protein_id="HGG7541027.1"
                     /translation="MHPIETPDKTFHDGDGVSELGTILPAWWLNQVQSELLAVLTAAG
                     IQPDKSQPNQLLAALNRLAVVTTGDQTITGQKTFTAQTQFQSGIHLSANQTNWNGGHK
                     AYIGAAADNAHIVFGDNTLRLHGANNRISYNNHDIFHKANKPRFAEDIKGKPNTLSGY
                     GIGNFKVETFRGDLNTLKTDGIYSLPTAVGSSNLPVENTACHIQVIAGTQPGWCRQLG
                     YPAYTSDVYERHQTSSANDNWSAWKKLNSDGIPAGAIVSFPKAVQNPAGYLKANGTTF
                     AQNTFPDLYRALGNSNRLPDLSRTDIGITAWFPSDQIPTGWLAFDDIRTRVTETAYPE
                     LYRLLTGKYGSIQNVPQAEDRFIRNAGNSLAVGTKQEDEIKRHVHKVFSHWTNHTDTA
                     AVGYEDHNERQRSALVSTWTDGDLNDNGFLTPRSDSKMATGGDENRPKALVLKLCIKA
                     ADTLGEAVFWIKSHGETINAGALDAGTLAQGLQDKADRDHTHTAAQIQGLDEKISTAV
                     AAQFTRQTIGGVDIVRFPDGTMIQTGSYRFTRSGGPIENEVVFPVAFADGNVKCFVSE
                     RHSGRVTGDRRQHNWLFIRAKNHAAAIITNWYEGSCDWMAIGKAASGNAASSPIGPEI
                     PETNEEPQRESGRTSTGPRNRRRRDGLLEALQD"
BASE COUNT         4088 a         4326 c         4597 g         3252 t
ORIGIN      
        1 ttttacgaaa agatgattga gctgtggtcg agcaaaagcc gtgaggcaag cgaacgggct
       61 gatttggcgg cgtttgaatt tgcggagggc gaactggcca attatcggga aatgctgaaa
      121 cggcacctgc aaaccaaaag tgtggaatag caatgcgtat tttggatatt tttaaaaacc
      181 cggcgacagg caatgtgtcg cactcgaagc tgtgggcaaa cgtcgcctgc gcggcgggga
      241 cgtttaaatt tgtgatgttg cccgacccgt cggcggagat ttgggcggtg tatttgggca
      301 ttgtcggcgg ctatgccgtg gcgcgctcgt ttgtcagcgt caaacgtcag gaggtcgaga
      361 atgaatctcg tgaaactgct ggcgaataac tggcagccga ttgccatcat cgcgcttgtc
      421 ggcacgggtt tggcggtgtc acaccatcaa ggctacaagg cagcctttgc gaagcagcag
      481 gcggtcatcg acaagatgga gcacgataag gcgcaagccc tgctgttgtc ggctcaaaac
      541 tatgcgcgcg aactggaact ggcacgcgcg gaagcgaaaa aatatgaagt caaggcgcac
      601 gctgtcggca tggctttggc gaaaaaacag gcggaagtca gccgtctgaa aacggaaaat
      661 aaaaaggaaa tcgaaaatgt ccttactcaa gaccgtaaaa atgcaggcgg cggttgtatt
      721 gacggctttg gccatcacgg cttgcagctc tacaagcgcg ccctcggcta cggaaattaa
      781 ggttgtcgaa aaggcggtca tgccgacacc gcctgccgca ttgatggtcg cgccggtacg
      841 cccaaatccg ccgaaagacg gcaagacggc cacgctgttg gaacacgccg ccgagtttgg
      901 cggctatgtg gcggagttgg aaaatcaaaa tcaggcttgg cgcgactggg cgggcaatca
      961 ctcccgcaaa gtcggaaact gacaaaaaag cccgcgtagg gcgcgggctg agggtgaaag
     1021 cggattttat acctctttta caggggtagc ggcggtagtg cttttcagca aatcgactgc
     1081 gtgctgacag ttttgcttgc tggtgtagcc ttcgccctga gcgatgattt catggttggc
     1141 tgctttcaaa cgccaacggt attcgccttt tgcgtcttta tagatttcaa aatacataag
     1201 gtttctccta tgaatgagta cacgttttct taccgcttta acggcaagtc ctggtcattg
     1261 agcatttggg cggacaaccc tgaagaagcc agggcgaaat ttcgggctgc acgagaaaat
     1321 gcgcactatg acggcgaagt tgtagcaaag gtttatacat ttgtaaatat ttcgtgggtt
     1381 aagaaattgt acaagcggac aaaatattta atgggtatca aagaatgacc taccgtgaat
     1441 tagttgaacg tcagttggct gtgcgccatg ccgatttgga attgggctta agccgcgcac
     1501 gcgagcaaga gccgtttgtc attcatgttt ccgatctgtt ggataaggca ggcattgagt
     1561 acgcggtacg catggataag gattttcaga cgacgtttca ccttgaatat ccaattacga
     1621 actatgacac ctttaaacgt gcggtttggc aaactttggg ggcgtattac tgtgtttgta
     1681 atgatggtga tggactggag attgccagca atcgccctga cggttacgcc gtccgtatcg
     1741 tattcggcga tgtgccggtt taaaggggtt ttaaatggac tttgaatttg gtttcagaac
     1801 cctgtggccg attgcgacgg cggcattttg gttttgggtc aacggcattt caggccgcct
     1861 gaaagaggcg gacaagcgta tcgacgacct taaagaggag ttgcacgcgg tcaagctctc
     1921 ttatcacacc aaggcggacg ccaaggcaga cagcactaat attgcggcgg ccttggagcg
     1981 aattgaaaac aagttagaaa aagtaaacga aaaactggac aggaaagcag acaaatcatg
     2041 agcgacccga ttttggaagc cttggcgcgt attgaaaaca agactgatca aacgctgaaa
     2101 aatcagaaag aaatgcaggc ggaaattgcg caaatccgcc aagacacgaa acgcacggcc
     2161 attacattcg gcgcactggg cggcggcgtg attacggtcg gctgggaatt gcttaaagcg
     2221 aaaatgggac tgtaattatg gctcacccgc aagaaatccg tgaaaagtta cgtcggctct
     2281 atgtgagcgg cgagcaaact ttggaaacgg cggccttgat gtgcgaaatc ccgcagacca
     2341 ctgcgcgtgc gtggaaacgt gcggataagg aaaaaggcga cgactgggat aagatgcgcg
     2401 ccgcctacac tttggccggc ggcggtattg aggacttgag ccgtgcgatg ttggccggtt
     2461 ttatggtgca gtacaacagc acgatgacga tgctgcagga ttcgagtacc gaagatttgc
     2521 ccccgtccga ccgcgccaag ctgttggcca gcctggccga tgcgtttacg aaaaccgtat
     2581 cggccaatgc gcgtgtgatg ccggaaacgt caaaactggc gacggctttg gaattgattg
     2641 agttcttgat ggcgtttgtg caagaaaaac atcccaaaca tttgcctgcc tttgtggagg
     2701 tattggagcc gtttggggcg gaagtggaga agaagtttgg ttaatagccg tctatcaatc
     2761 tcccataacg tgatcctcct actgaaaata cttcaacatc tgactttaaa cgctctccca
     2821 atattatggt ttggcaacgg gaacaggaat atttatgaaa agcaccttca tacccattga
     2881 attgaagaat cgatttgaca ccctgctcgt aacattgggg acaaatatca tgaattggct
     2941 cgctgttcgc catctctgtt ttcaatcgat agacgaaaga accaggagca agttcataca
     3001 attggtagcg ttgcttctct gtagaccaat tttttactgc caccagttct ttttccaact
     3061 catctatacg gctaattgcc gccgtataag aagattgggc ttcaaataaa tcagtttgaa
     3121 taccagcaat gatttgatta agttcgatgg ttttttgcgc tacctctgcc tctgttttga
     3181 gctggttaaa cccttttaaa agtgatcctg cttcttttag gcctataaat gcgttagaaa
     3241 tgaatccagt cattataaat actcatgaaa acaaaagaat tcctcaaatc ccttgccgaa
     3301 ctggccgcca gtttgcgcca agtcatcgaa gcggaagtgg acggcttcga tgcgtcgccc
     3361 aaggctgttt ctgcacgccg tgccaaggtg tttgacccga taggcggtta cgaatatttc
     3421 gtcaacacct acttccccca ttatatccgc tcgcctgaga aatccgaact gcatgcgttt
     3481 ttattcagcc gtctgccgga gattatccgc tcccccaaag gggaaaatga ggcggtgggc
     3541 gcaccgcgtg gcgagggtaa atcgacgcag gttacccagt tgtttacgct gtggtgtatt
     3601 gtgaccggcc aaaaacatta tgccgttatt gtgatggaca gcatagacca ggcatacccg
     3661 atgctcgaag ccatcaaggc ggaattggaa tttaatccgc gcctgaaaac cgactttcct
     3721 gaagtctgcg ggcaaggccg tgtatggcag gccggtacga ttgtgacggc caatgacgtt
     3781 aaggtgcaag tggccggtag cggtaaaaag ctgcgcggtt tgcgtcacgg cccttaccgt
     3841 cctgacttaa ctgttttgga cgatattgag aatgacgaac aagtccgcaa ccccgaacag
     3901 cgcgacaagc tcaatgcgtg gctgactaaa acggtattgc ctttgggcgg ggtcggtcag
     3961 aaatacgatg tgatttatat cggcacgatt ttgcattacg acagcgtact taaccgcact
     4021 ttgaataacc cgttttggcg gggtgttaag tttaaggcga tgaaacgctg gcccgaccgc
     4081 atggatttgt gggacaggtg ggaggaactt ttccgaaacg acggcgagac ggtggccgag
     4141 gcgttttatc aggcaaacaa agacgagatg gagcgcggcg cagtcacttc ttgggcggcg
     4201 cgtggcgtac tcgcgctgat gaaaatccgt gcgcgtgacg gccatgcgac gtttgattcg
     4261 gaatatcaga atgatccggt cagtggcgaa gatgcgccgt ttgccaagtc gatgaagttt
     4321 tggaacgacc tgccgtccga tttggtgtat ttcggtgcgc tcgacccgtc gctgggtaaa
     4381 gcgggggcga gccgtgaccc gtcggcaatc gtcatcggcg gctatcagcg gtcaatgggc
     4441 aggctttatg tcgtggaggc gcaaatcaaa aaacgtctgc ccgacctgat tatcgaagac
     4501 gttatctgcc tgcaccgtca atatcgttgc aaactgtggt ttgttgagac ggtgcagttt
     4561 caggagtttt taaaagacga gctggtcaag cgcagcgcgg cgcgtggaat acctgtcccg
     4621 gcgcgggcgg tcaagccggt atcggacaaa ctcttgcgga ttgagacttt gcagcctcac
     4681 atggcaaacg gtttgattct gttgaatgag agccaacaga cgctgataca gcagttccgc
     4741 cattttccaa aggctgatca tgatgatggt cctgatgccg tgcatatgct ctggtcgggg
     4801 gcggtggcca attgtgtgcc gatagaatgg caaagcccta ccgataacga ttttggtaac
     4861 gagataaaaa gtaaatggag ccgataatgg caaaaaagga caataaaact aaaatccaaa
     4921 agcccgaggc tgcattgcag acggatgcgg ctcaaattac ggcgaccggt cgggttatcg
     4981 ccgagcatcc gtccaatttt attacgccgc aaaagatgcg cgccctcttc gaggacgcag
     5041 aaagcggcga catccgcgcc caacacgagc ttttcgcgga cattgaggag cgcgacagcg
     5101 acatcgcggc aaatatgggg acgcgcaaac gcgcgctgct gacgctcaac tggcgcgtcg
     5161 ccccgccgcg aaatgcgacg cccgaagaag aaaagctgtc cgaccaagcc tacgaaatga
     5221 tggacagcct gcctaccctc gaagacctga ttatggattt gatggacgcg gtagggcacg
     5281 gattttctgc gttggaggtc gagtgggtat tttcagacgg cctttacctg ccccgaaact
     5341 ttatccaccg cccgcaaagc tggttcaaat gggacaaaga cgacgggctg ctgctgcgta
     5401 cccgcgaaaa tccggaaggc gaagcgttgt ggccgctggg ctgggtcgtt catacccaaa
     5461 aatcgcgcag cgtccggcag gcgcgcaacg ggcttttccg ctcgctttcc tggctgtata
     5521 tgttcaaaca ctacgccgtc cacgattttg ccgagttttt ggagctgtac ggcatgccca
     5581 tccgtatcgg caaatacggc gcgggcgcaa ccaaagagga aaaaaacacc ctgcttcgag
     5641 cggtggcgga aatcggtcac aacgcggcag gcatcatgcc agaaggtatg gaaatcgagc
     5701 tgcacaacgc tgcaagcggt acgacggcaa ccagcaatcc gtttttgcag atggccgatt
     5761 ggtgcgaaaa atcggcggcg cggctgattt tggggcaaac gctgaccagc ggtgcggacg
     5821 gaaaatccag caccaacgcg ctgggcaata tccacaacga ggtacgccgc gatttgctgg
     5881 tgtcggacgc aaaacaggtg gcgcaaacca tcacaagcca aatcatcgga ccgttcctgc
     5941 aaatcaacta tccccatgcc gacccaaacc gcgtgccgaa atttgaattt gacacgcgcg
     6001 agccgaaaga catcgcggtc tttgccgacg ctatcccgaa actggtggat gtcggcgtac
     6061 aaatccccga aagctgggtg cgcgacaaac tggtcattcc agatgtgcag gagggtgagg
     6121 ctgtgttggt gcggcaggta ccggacaatc cggtaaacag aactacattg gcggctttat
     6181 ccgcccacac cgtaccatct aaggctacgg gcaggcatca ggaaatattg gacggcgcgt
     6241 tggatgacgc gctggttgag cccgatttca attctcagct caacccgatg gtgcgtcagg
     6301 cggttgccgc acttaatgct tgcaacagct acgaggaggc agatgccgca ctgaatgcgc
     6361 tttatccgaa tttggacaac gcgaaactgc gtacctatat gcagcaggcc ttgtttatca
     6421 gcgatatttt gggacaagac catgcccgcg cctgatttgg gatttgcctt aagtctgccg
     6481 ccaaaaaagg caatcgagtg gctggaaagt aaaaaggtta cggcggagag ctaccgcaat
     6541 ctgacagcct ccgaaattgc caaagtctat acgattgccc gcatgaccga cttggatatg
     6601 ctcaacgaca tcaaaacttc gatggttgaa tcggcaaaaa gtggacagtc gtttgacgat
     6661 tggcgaaaag gtatcttgaa tctgctcagc aacaagggct ggctgcatcc gaacgggcat
     6721 aacggtaagg atatcatcga cccagccacc ggcgaggtat tcggttcgcc gcggaggttg
     6781 gagacgattt accgtaccaa catgcaaact gcctacaacg ccggtcaata tcaaggatat
     6841 atggcaaata ttgatgcacg accttattgg atgtatgacg cggtaggcga cagccgcacc
     6901 cgtccggcgc attcggcaat agacgggctg gtgtaccgct acgacgaccc gttttgggca
     6961 acgttttacc cgcccaacgg ctacaactgc cgctgctcgg tcatcgcgct gtcggagcgg
     7021 gatgtggaac gccaggggcg gattgtcggg caaagcacgg cggataatct ggtcgagacc
     7081 cataaaatct ataacaaaaa aggcgacagc tacccgacga ctgcctacaa ggccccggac
     7141 ggcagcctct acacggctga caaaggcttc ggctacaacg ccgggcgaat gaactaccgc
     7201 cccgatttag acaagtacga ccgcgcgctg gcgcatcaat ttgccaaagc ggaaatgggt
     7261 ggtgcagatt ttaaaaccag ctttaaacag cttgaaaaag agttttatga agtcaagcaa
     7321 cgtttggata ttgatggcaa gcccgataaa gagcagaaaa tcaaaatccg aaatgcgcta
     7381 tcaagacagc ttaaatttgc tgcgggtgta ttgagcaagg aaacgcaaga attggcaggt
     7441 atgacacgag cgacggtgtg gctgtctgat gatacgttgg ttaaacaggt agacagccgt
     7501 gaggggcaga atttcgatga ctcctactat gcttttttgc cggatatgct gcaaaaccct
     7561 gaacatgtca tccgcgacaa tcgtgaattg attttcacag ctcgctataa aggctcggca
     7621 ttgtgggcag ttttaaaata tattaaggag gtggatgaga tttatctaca gtcgtaccga
     7681 atcagcaacg acaaagagat tgccaaattt atggcgaaga agaaagtatt gaaatagacg
     7741 ttgggcaagg ctcgaattca cttgcacacg ctctcgtaca ccctaaaggg caggctgcgg
     7801 tatcgagatt atcaccgctt ttccaacgcc tataaggaat cataccatga ttgatgtcaa
     7861 aatagacaat atctttgtcg tcctaaacca aatcgagcgg cttggcaacg ggatcgaaaa
     7921 ccgctacctg ctgatgcgcc gactgtccga aaccatgcac acggcggtca agctcaattt
     7981 ccgctacgca ggccgtccga aatggttggg gctaaaatac cgcgacggca agccgctttc
     8041 ggattcgggt cgtctgaaag acagtttttc cacactgtca gacaacgata cagcccttgt
     8101 cggtacgaat atcgtctatg ccgccatcca caacttcggc ggtatggcgg ggcgcaaccg
     8161 caaagttcgg attccgcaac gggaattttt gacgctgacg gacgacgaca aacaggcttt
     8221 gatggacgat gtgcaggatt atttttcggg tctgataccg tgaatttata aaaccctcaa
     8281 aaacgcgctt tttagcgcgt ttttttatgc gggtaataca aacccctgcc caagatataa
     8341 aaatcaatcc tagacgcttc taaaaagccc ctgaaaacga ttaattgtgt atcgcgcgga
     8401 caggttttaa aaaaatggcg ggagggtttg aagcacgcct actctttgtt gttttttcaa
     8461 ataggcaaaa tgaccgtatt gagagaggta cacatgtcca aaaatgcaca aaaaacccta
     8521 cttgccgtgt gcagtttcga ggtgcagcca aaagacgggc gaatccaact gctgccatat
     8581 ggcgaatttc gcgcagtaga cggtcgtccg actgatgtcc ctgcgtggta tctgaccgaa
     8641 gaaaacggtc atgatgtcgc gttgttggcc aacagctcgc gcaatcagtt ggttgtcgat
     8701 tatgaacacc agacgctcta caaagagaaa aacggacaac ctgcacctgc cgccggttgg
     8761 atgcgttggc tggagttcac gcctaaaggc atgtttgccg aagtggagtg gacggacaag
     8821 gcggctgcgg caattgccgc aaaagagtat cgctacatct ctgctgtgtt ttcctatgac
     8881 acaaagggat atgtaagcaa aatttttcac gcagcgctga caaatttccc cgcgttggac
     8941 ggtatggacg aggtgctggc ggcagcgtcg gcgcaaattt taaaaccgga aacggagcaa
     9001 aaccctatga aagagttgtt acagcaactg ttcggtctgc ctgatgcggg cgaagaagaa
     9061 ctgaaggcgg cattgtccgc gctcgtggaa gccaagccgg aaggtgcggc tttgtccgcc
     9121 gatgtattcg cgcagctggc ggaaaaagac agccgcattg cggctttgtc ggcgcaaaac
     9181 ggcacgcccg acctgacgcg atacgcgccg gtgtcgctgg tgcgcgacct gcaaaaccaa
     9241 gttgccgccc tgaccgccga gcgcgaagcc gacaaaggcg gcgaactgat taccgccgca
     9301 ctgtctgctg gcaagctgct gcccgcacaa aaagaatggg cggaaggcgt gctgaaacag
     9361 ccgggtggct ttgccttttt gagcggcttt atcgaaaacg cccagccggt cgctgcactg
     9421 gcaggctcgc aaacgggcgg caaagcaccc gacgaacgcg tcgccgcact gactgcggaa
     9481 gaggcagccg cagcaaaaat gctgggcatg tccggcgaag aatttgtaaa aatcaaagaa
     9541 agcgaaggta agtaatggac aaatcagcga ttttgaccgc aatcacggca gcattccgca
     9601 aagaatttca aacgggggcc tgcaaaaccg cctgaaccgt ttaaccgcca aataggtgca
     9661 gccggtagcg caggcagtgc gcctgttatc cacgtcatcg ctgttgtcgg tggcaacggc
     9721 attaatcgag gcgcatggcg aagagatgac cgcgcccgat ttgattgagg ttaaccgcgc
     9781 catgcgccgc cgtatgcagg ccgagattgc cgccttgcgg gcggtgcaga cggctgctgc
     9841 cgagtctggt gggctgacgg ccaacgccgt gtataccgag gcttaccaaa cggcagaatc
     9901 cctgcgcgcg gcggcaggca gtctgaatgc gttggttgcg gcggccatca accaaaagcc
     9961 gccgctgatt gtgcgccaag ccccaatcga cggtacgata caccaaatcg cccacgagtt
    10021 ttacggcgat atagcccgcg cagcagagct ggtgcgactc aatccccata tccaccaccc
    10081 cgcgtttatc aagcgcggca ctttggtcaa cagctatgca aaataattca tacggctatg
    10141 ccgtgtcggt gcgcgtgggc ggtaaagagc accgccactg ggagcgctac gacatcgaca
    10201 gcgacttttt aatccctgcc gacagcttcg attttgtcat cggcaggttg gggccggagg
    10261 cggccatacc cgatttaagc ggagagagct gcgaggtagt gatagacggg caaatcgtga
    10321 tgacgggcat catcggcagc cagcgccacg gcaaaagcaa gggcagccgc gagttgagct
    10381 tgagcgggcg tgatttggcc ggttttttgg tggattgctc cgcgccgcag ctcaatgtaa
    10441 agggcatgac ggtattggat gcagccaaaa agctggccgc gccgtggccg cagattaaag
    10501 cggtggtgct taaggccgaa aacaaccccg ctttggacaa aatcgacatc gagccgggcg
    10561 aaactgtatg gcaggcatta acccatattg ccaactcggt cgggctgcat ccgtggctgg
    10621 agccggacgg cacgttggtg gtgggcggtg cggattacag cagcccgccg gtggcgacat
    10681 tgtgttggag ccgcaccgac agccgctgca atatcgagcg catggacatt gagtgggata
    10741 ccgacaaccg cttttccgag gttacttttt tggcgcaatc gcacggccgc agcggcgaca
    10801 gcgccaaaca cgatttaaag tgggtgtaca aagacccgac gatgacgctg caccgcccta
    10861 aaacggtggt ggtgtccgat gccgacaatt tggccgcatt gcaaaagcag gctaaaaagc
    10921 agctggccga ctggcggctg gagggattta cactcacgat aaccgtgggc ggccataaaa
    10981 cccgcgacgg cgtattgtgg caacctggcc agcgtgtgca tgtgatcgac gacgagcacg
    11041 gtatcgatgc ggtgtttttt ctgatggggc ggcggtttat gctatcccgc atggatggca
    11101 cgcaaaccga gctgcggctc aaagaggacg gtatttggac acccgacgct taccccaaaa
    11161 aggccgaggc ggcgcgcaag cgcaaaggca aacgcaaagg cgtgagccat aagggcaaaa
    11221 aaggcggcaa aaaacaagca gaaacggcgg tgtttgaatg agtttgagta aattggcgaa
    11281 aaaaacggca caaactgcta aaaatatcgg cgaaaccctg cgcacggcct ttcggggaaa
    11341 aatcacgctg gtggtgtcgt ccgagccgat acagcgcgtg cagttgagcg gcttggccga
    11401 cgaaaccctg caagaccttg aacatttgca ggaatacggc tttgccagcc atccgcccga
    11461 cggcagcgaa gcggtagtga taccgctggg cggcaatact tcgcacggtg tgattgtgtg
    11521 cagccagcac ggcagctacc gcatcaaaaa ccttaagccc ggcgagacgg cgatttttaa
    11581 tcatgagggt gcaaaaatcg tgattaagca aggcaaaatc attgaggccg attgcgacgt
    11641 gtaccgggtt aactgcaaac aatacgaggt taatgcggcc acggatgcca aatttaacgc
    11701 tccgttggtg gagaccagtg cagtgttgac ggcgcaaggc caaatcaacg gcaacggcgg
    11761 catggccgtc gagggcggcg acggagccac ctttagcggc gatgttaacc aaacgggcgg
    11821 cagctttaac accgacggcg acgtggtggc cggcaatata tcgttgcgcc agcacccgca
    11881 taccgacagc atcggcggca aaaccttacc ggcggaaccg gcatagacaa gcagaccttt
    11941 ggcagccttc gggctgcttt ttttgtgcgt gtgggattga agcccgtgta ctccgtgagg
    12001 ccgtctgaaa acggcaaaat gccaacatgg acaaagagct aaaccccagc atcggcgact
    12061 ataccggccg caccgtcgat acgctgcaaa atgccgtgta tatccgcttg atgacaccgt
    12121 tgggcagctg gtgggcggat aaaacgctcg gctcgctgct gcatttgttg cagcgcgaaa
    12181 aagacctgca acgggtcagc ctgttggccg agcaatatgc cgatgaggca ctgcaaccga
    12241 ttgttaagag cgggcgtgcc gacaagatta ccgtgcgcgc agagcagccg cacgacggcc
    12301 gcctgatcct gcatatccgg gtggatacgg cggcgggcgg gtttgattac cgccacgaag
    12361 tgcccgtgat ttaaagaggt tttaaacgtg tttgaaacgc cgacatttga gcaaatccgc
    12421 gagcgtatcc tgcgcgatac caaaagcctg tggccggatg ccgatatcag ccccgacagc
    12481 gaccattatg tgcacgccag ccgtttggcc agctgcgccg aagggcaata tgcgcatcaa
    12541 agctggattg tgcggcagat tttccctgat accgccgacc gcgagtattt ggagcggcat
    12601 gcctccatgc gcggcttgcg ccgccgcaat cctaccacgg ccagcggcac gctgaccgta
    12661 agcggtattg cgcaatccat gctttcagac ggcctgcaag tgcgtatcgg ccagcgtttt
    12721 taccgcacta ccgcccgcgc cgttatcggc agcggcggca cggcggaaat accggcaatc
    12781 gccgacgagc tgggcgcggc cgccaatgtg cgcgacggcg aggcgcaact gatggccgcc
    12841 cccgccggtg tgtccaccga atgccgcctt accgtacaag gcggcaccga ccgagaaagc
    12901 gatgcctcac tgctggcgcg tctgttggaa atcatccgcc gaccgcccgc aggcggcaac
    12961 cgttacgact ataaaaactg ggcgttgagt gttgacggcg taaccagcgc atatgtttat
    13021 ccgctgcgcc gcggcttggg tacggtggat attgccatta cctccgccga cggtgtgccg
    13081 tcggaagaaa ctgtgcgccg cgtacaggct tatatcgacg agatgcgccc ggtaacggca
    13141 aaaaatgcgc tggtactcaa gccaaccgta acggcggtgc ctgttaccgt gcaagtcaag
    13201 ctcgacggca tcgacttgga cgatgccaag cgccgcatac ggacggctct aaaagaatat
    13261 ttcgacaccc tgatccccgg cgacggtctg actgtgtcgc aaatcgaggc ggctatcagc
    13321 aatgtggatg gtgtgatcga ccgccgtctg actgcgccga cggccaaccg tgccgccgat
    13381 acggttaacc gcatcgagtg gtttaaagcg ggcgcgatta atgtaacgga gatgccgtca
    13441 tgagctatca agacatcttg cggggtctgt tgccccccgt gtcgtatgcc cgcaatgccc
    13501 cgcgtgtgcg ggcgcaggca gaaatagacg gcgcagcgct ggatgcggtg gcggaatcgg
    13561 ctcaaagcgt tgccgatgcc gtcgacccga gcagcgccgg ccaaatgctg gccgattggg
    13621 agcgcgtatt aggtttggac ggtacgggca aaaaccgcca gcgccgtgtg ttggccgtca
    13681 tggccaagct aaacgaaaca ggcggcttga gtattcctta ttttgtgcgt ttggccgagg
    13741 cggcgggcta tcaaatccaa atcgacgaac cgcagccgtt ccgcgccggt gtaaaccgcg
    13801 ccggcgaccg tcttgcgccg caggaaatca tgtgggtgtg gcacgttaac gtgcgcggcg
    13861 gcaacaaccg cattacccga ttccgcgccg gtatctcggc ggcgggcgac aggctgaccg
    13921 attacagcga tgccgtgatc gagagcctgt tcaaccgcct caagcccgcc cacaccgcta
    13981 tccgatttac ctaccgataa ggactaaacc atgcacccca tcgaaacccc cgacaagacc
    14041 ttccacgacg gcgacggcgt gtccgaattg ggcaccatcc tgcccgcgtg gtggctcaac
    14101 caagtgcaat ccgagctgct ggccgtgctg actgcggccg gtatccagcc ggataagtcg
    14161 cagcctaatc aattactggc agcactaaat aggctggctg tagttaccac cggcgaccaa
    14221 accatcaccg gccaaaaaac ctttactgcc caaacccaat tccaaagcgg catccattta
    14281 tccgccaacc agacgaactg gaacggcggc cacaaagcct acatcggcgc ggctgccgac
    14341 aacgcccaca tcgtcttcgg cgacaacacc ctccgcctgc acggcgcaaa caaccgcatt
    14401 tcctacaaca accacgacat cttccacaaa gccaacaaac cgcgttttgc cgaagacatc
    14461 aaaggcaaac cgaacacact gtccggatac ggcatcggca atttcaaagt cgaaacattc
    14521 cggggcgatt tgaacaccct caaaacagac ggcatctatt ccctgccgac ggcggtcggc
    14581 agctccaacc tgcccgttga aaacaccgcc tgccatatcc aagtcatcgc cggaacgcaa
    14641 cccggctggt gcaggcagtt gggttatccc gcctacacgt ccgacgtgta cgaacgccac
    14701 caaacgagca gcgcaaacga caactggtcc gcatggaaaa aactcaattc ggacggcatc
    14761 cccgccggcg cgatcgtatc ctttcccaaa gccgtacaaa accccgcagg ctatctcaaa
    14821 gccaacggca cgacctttgc gcaaaacacc ttccccgacc tctaccgcgc cttgggcaac
    14881 agcaaccgcc tgcccgattt gagccgtacc gacatcggca tcaccgcgtg gtttccgtcc
    14941 gaccaaatcc cgaccggctg gctggcgttt gacgacatcc gcacgcgcgt aaccgaaacc
    15001 gcttatcccg agctgtaccg tctgctgacc ggaaaatacg gcagcatcca aaacgtcccg
    15061 caggcggaag accgctttat ccgcaacgca ggcaacagct tggcagtcgg aacgaagcag
    15121 gaagacgaaa tcaaacggca cgtccacaaa gtattttcac actggacaaa ccacacagac
    15181 acggcagccg tcggttacga agaccacaac gaaaggcaga gaagcgcgct cgtatcgact
    15241 tggacggacg gcgatttaaa cgacaacggc tttttaaccc cgcgctcgga cagcaaaatg
    15301 gcaacgggcg gcgacgaaaa ccgccccaaa gccctggttt taaaactgtg catcaaagcc
    15361 gccgacacct tgggcgaagc cgtgttttgg ataaagtccc acggcgaaac catcaacgca
    15421 ggcgcgctgg acgcgggcac gctggcgcaa ggtttgcaag acaaagccga ccgcgaccac
    15481 acccacaccg ccgcccaaat ccaagggctg gacgaaaaaa tcagcaccgc cgttgccgcg
    15541 caattcacac gccaaaccat cggcggcgtg gatattgtca gattccccga cggcacaatg
    15601 atacagaccg gcagttacag gtttacaaga agcggcggcc ccatcgaaaa cgaagtcgtc
    15661 ttccccgtcg cctttgccga cggcaacgtc aaatgcttcg tatccgaacg ccattcggga
    15721 cgcgttaccg gcgatcgaag gcaacacaac tggctgttta tccgcgcaaa aaaccacgcc
    15781 gccgccatta ttaccaactg gtacgaaggc agttgcgact ggatggccat cggcaaagcc
    15841 gcctcgggaa acgccgccag ctccccgata ggccccgaaa tacctgaaac caacgaagaa
    15901 ccgcaaagag agagtggaag aacatcaacc ggaccccgaa accgccgccg ccgagacggc
    15961 ttgctcgagg cactgcaaga ctagcgggct gtagagatgg ctgtagagac gggctgtaga
    16021 gatgggctgt agagatgggc ttcagcccgc cgatccaagc aatccgaccg aaaccggccg
    16081 cgccgccaat cccccgaaac ctatgccccg ccaatcctgc cactcttcgt cattcccgcc
    16141 gctttcgtca ttcccgcgaa agcgggaatc cagcccctaa acgcggcagg aatctatcgg
    16201 aaaaaacaga aacccccgcc accgtcattc ccgcgaaagc gggaatctag accccaaacg
    16261 cgg
//
LOCUS       DBBZXU010000040        15406 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.040, whole genome shotgun sequence.
ACCESSION   DBBZXU010000040 DBBZXU010000000
VERSION     DBBZXU010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15406
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.040"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(241..858)
                     /gene="thiE"
                     /locus_tag="ACJJDE_001087"
     CDS             complement(241..858)
                     /gene="thiE"
                     /locus_tag="ACJJDE_001087"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HGG7541028.1"
                     /translation="MTFPPLKSPLKFYAVVPTADWVGRMVKAGADTVQLRCKALHGDE
                     LKREIARCVAACQGSHTQLFINDHWREAIEAGAYGVHLGQEDMDTADLAAIAAAGLRL
                     GLSTHSVAELDRALSVHPSYVASGAIFPTTTKQMPTAPQGLDKLCEYVKQAGGTPVVA
                     IGGIDLNNARAVLATGVSSLAAVRAVTEAANPEAVVKAFQALWDG"
     gene            complement(879..1979)
                     /locus_tag="ACJJDE_001088"
     CDS             complement(879..1979)
                     /locus_tag="ACJJDE_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HGG7541029.1"
                     /translation="MTRIAILGGGLSGRLTALQLAEQGYQIALFDKGCRRGEHAAAYV
                     AAAMLAPAAEAVEATPEVIKLGRQSIPLWRNIRGHLKTPAMMQENGSLIVWHGQDKPL
                     SSEFVRHLKRGGVADDEIVRWRADEIAEREPQLGGRFSDGIYLPTEGQLDGRQILSAL
                     ADALDELNVPCHWEHECVPEGLQAQYDWLIDCRGYGAKTAWNQSPEHTSTLRGIRGEV
                     ARVYTPEITLNRPVRLLHPRYPLYIAPKENHVFVIGATQIESESQAPASVRSGLELLS
                     ALYAVHPAFGEADILEIATGLRPTLNHHNPEIRYNRARRLIEINGLFRHGFMISPAVT
                     AAAVRLAVALFDGKDAPERDEESGLAYIRRQD"
     gene            complement(1976..3199)
                     /gene="cytX"
                     /locus_tag="ACJJDE_001089"
     CDS             complement(1976..3199)
                     /gene="cytX"
                     /locus_tag="ACJJDE_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003519479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative hydroxymethylpyrimidine transporter
                     CytX"
                     /protein_id="HGG7541030.1"
                     /translation="MSGNASSPSSSAAIGLIWFGAAVSIAEISTGTLLAPLGWQRGLA
                     ALLLGHAVGGALFFAAAYIGALTGRSSMESVRLSFGKRGSVLFSVANMLQLAGWTAVM
                     IYAGATVSSALGKVLWDGESFVWWALANGALIVLWLVFGARKTGGLKTVSMLLMLLAV
                     LWLSAEVFSTAGSTAAQVSDGMSFGTAVELSAVMPLSWLPLAADYTRHARRPFAATLT
                     ATLAYTLTGCWMYALGLAAALFTGETDVAKILLGAGLGAAGILAVVLSTVTTTFLDAY
                     SAGASANNISARFAETPVAVGVTLIGTVLAVMLPVTEYENFLLLIGSVFAPMAAVLIA
                     DFFVLKRREEIEGFDFAGLVLWLAGFILYRFLLSSGWESSIGLTAPVMSAVAIATVLV
                     RLFFKKTQSLQRNPS"
     regulatory      complement(3266..3369)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            3547..5031
                     /gene="tldD"
                     /locus_tag="ACJJDE_001090"
     CDS             3547..5031
                     /gene="tldD"
                     /locus_tag="ACJJDE_001090"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HGG7541031.1"
                     /translation="MPYNQAPDFLCADTMHPTYSAVQARLLEANRLSPELLAKSLCII
                     GAHHVDYADIYCQRTAYESWHLEEGIVKSGSFQINQGVGVRAVSGDKTAFAYADSLCI
                     DSINRSARAVRAIGAAGGKVSAKMPSETRGKPVCSASDPIAGLDSAAKVALLNKVEAI
                     AKAADPRIVQVMAGLTCEYDMVYLARLDGKHAADIRPMVRMNVTVIAKQGERREQGSA
                     GGGGRYDLAYFDENLVHRFVDSAVKQALTNLESRPAPAGEMTVVLGNGWPGVLLHEAV
                     GHGLEGDFNRKGTSVFSGRIGERVAAKGVTVVDQGDIAGRRGSLNIDDEGNETRRTVL
                     IEDGILVGYMQDETNARLMGTQSTGNGRRESYASVPMPRMTNTFMENGGYEPDEIIAS
                     IDKGIYAVNFGGGQVDITSGKFVFSASEAWWVEGGRLQYPVKGATIIGNGPEVLKHVS
                     MIGNDTALDSGVGVCGKEGQSVPVGVGQPTLRIDAGLTVGGSAI"
     gene            5096..5557
                     /locus_tag="ACJJDE_001091"
     CDS             5096..5557
                     /locus_tag="ACJJDE_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541032.1"
                     /translation="MQEQNRKSSFPIVMLLVSVALWIASLSNVAFYLGNHGSMEGLTV
                     LILGSIFASLDIRYCAVYANYVWLAAIVLLALRKKVVPVHAALWGLALVAFSVKAVYV
                     DEAGNTSDIVRYGAGFYLWYAAFAVATIGTFAGKNKERKAASAADGIKNDV"
     gene            5547..6368
                     /gene="prmC"
                     /locus_tag="ACJJDE_001092"
     CDS             5547..6368
                     /gene="prmC"
                     /locus_tag="ACJJDE_001092"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HGG7541033.1"
                     /translation="MTFDEWLGLSKLPKIEARMLLQYVSEYTRVQLLTRGGEEMPDEV
                     RQRADRLAQRRLNGEPVAYILGVREFYGRRFTVNPSVLIPRPETEHLVEAVLARLPEN
                     GRVWDLGTGSGAVAVTVALERPDAFVRASDISTPALETARKNAADLGARVEFAHGSWF
                     DTDMPSEGKWDIIVSNPPYIENGDKHLLQGDLRFEPQIALTDFSDGLSCIRTLAQGAP
                     DRLAEGGFLLLEHGFDQGAAVRGVLAENGFSGVETLPDLAGLDRVTLGKYMKHLK"
     gene            6454..7842
                     /locus_tag="ACJJDE_001093"
     CDS             6454..7842
                     /locus_tag="ACJJDE_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter family protein"
                     /protein_id="HGG7541034.1"
                     /translation="MNAVVVAVIVMLVLSLSRVHVVLSLTVGAFVGGAVAGMPLQNIA
                     DAAGQVSQAGIIPVFNKGLEGGAKIALSYAMLGAFAMAITHSGLPQQLAGAVVRKLNR
                     GGMPDSVRSGEGAVKWLLLSIILVMGIMSQNIIPIHIAFIPMIVPPLLLVFNRLKIDR
                     RLIACVITFGLVTTYMFLPYGFGAIFLNEILLGNIHSAAPQLDVKNINVMAAMAIPAL
                     GMLAGLLLVFVHYRKPRLYQSNNADTAGNADAANRPQPSAYRSLAAAAAIAVCFAIQL
                     MYEDSLVLGAMLGFAVFMMLGVINRDKANDVFGEGIKMMAMVGFIMIAAQGFAAVMNA
                     TGHIQPLVESSMAIFGNSKGMAALAMLVVGLLVTMGIGSSFSTLPIIAAIYVPLCVGL
                     GFSPLATVAIVGTAGALGDAGSPASDSTLGPTMGLNADGQHDHIRDSVIPTFIHYNIP
                     LLIAGWIAAMVL"
     gene            7843..8067
                     /locus_tag="ACJJDE_001094"
     CDS             7843..8067
                     /locus_tag="ACJJDE_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SlyX family protein"
                     /protein_id="HGG7541035.1"
                     /translation="MDAVQELERRIVELEIQSALQEDVIAGLNAMVAELRQTLDLQQA
                     QLRLLYQKMQDRNPDAQEPYSLRDEIPPHY"
     gene            complement(8465..9358)
                     /locus_tag="ACJJDE_001095"
     CDS             complement(8465..9358)
                     /locus_tag="ACJJDE_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7541036.1"
                     /translation="MPHPCQTVHTLTARVPKCRLKLNAARRQRYNRPQLFFPNIIMTT
                     TEHDNDDAFLLRYSRHILLDEIGIEGQQKLSAAHILVVGCGGLGAAALPYLAASGIGT
                     LTIADSDTVELHNLQRQVAFDEGDVGKPKAEALADRLKRINHNVDVRTVNEKLDGCRL
                     TGLVQTADIVLDCCDNYATRQAVNRVCVQTKTPLVSGAAVRFEGQLAVYRPDLPDSPC
                     YACLFDGGSASDGICSLFGVFSPLVGIIGSTQAAEALKILLDAGEPSHGRLAVYRALE
                     GGWQYFDLPRNPECPICGAER"
     gene            9401..12103
                     /gene="ppc"
                     /locus_tag="ACJJDE_001096"
     CDS             9401..12103
                     /gene="ppc"
                     /locus_tag="ACJJDE_001096"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008964 - phosphoenolpyruvate carboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0015977 - carbon fixation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HGG7541037.1"
                     /translation="MQLHILNNPKDAALAADAEFLKQSLFNLLHEEASPLVVETVKLL
                     STSDDSAALIEKVLPQLDEQQTHDLTLACGLFAQILNIAEDVHHERRRQIHEEAGRGG
                     AEGSLTETVRRLKAGKADGKSVQRQLDNTSVTAVLTAHPTEVQRQTVLSFNRRIRALL
                     PQRERCTNADALARLRREIDTILLGLWQTSETRRHKLSVNDEINNGVSIFPMSFFEAL
                     PKLYRNMEHDFQMVYPDVCVPNILKIGGWIGGDRDGNPFVSAETLRFAFRRHADAVFR
                     FYRGELDKLYRELPLSIRRVKVNDDVMALAALSPDEELARTEEPYRRAIAYIMARAMG
                     KARALGLGMGCKFGFLEPYASAQEFLDDLKKLQRSLIDNGSRLLAEGRLADLIRSVSV
                     FGFHMMPLDLRQHAGKHADVVAELFQHAGLEDYNSLNEEQKQAALLRELSHQRPLYSP
                     FITYSDHTRHELAIFNEARKIKDEFGEDAVTQSIISNCEQPSDLLALALLLKESGLLA
                     VENGKPQSRINIVPLFETIEALENACPVMETMFRLDWYDALLESRGNIQEIMLGYSDS
                     NKDGGYVTSSWCLYQAELGLVELFKKYDVRMRLFHGRGGSVGRGGGPSYQAILAQPAG
                     SVAGQIRITEQGEVITAKYADPGNAQRNLETLVAATLEASILPDKKDPDAKLMQALSD
                     VSFKYYRELITHPDFIDYFLQTSPIQEIATLNLGSRPASRKTLARIQDLRAIPWVFSW
                     MQNRLMLPAWYGFGSAVETLCEDKPETLAALREHAQSNPFFQAMLSNMEQVMAKTDIT
                     LAENYAGLSESPEKAAVIFGMIKEEYQRSRKALLDLLQTEELLRDNRSLARSLALRIP
                     YLNALNGLQVAMLKRLRKEPDNPHALLMVHLTINGVAQGLRNTG"
     gene            12226..13215
                     /locus_tag="ACJJDE_001097"
     CDS             12226..13215
                     /locus_tag="ACJJDE_001097"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase (FAD) complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HGG7541038.1"
                     /translation="MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARE
                     NKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLA
                     ACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
                     ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLA
                     EITRLASAMGAQPKTMMGLAGIGDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGH
                     VSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVERLMERSARFE"
     gene            13270..13599
                     /locus_tag="ACJJDE_001098"
     CDS             13270..13599
                     /locus_tag="ACJJDE_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541039.1"
                     /translation="MKQNIEKLESSVYTLVQKFETLVSENRRLKETVAELKRAHERQK
                     LEHETAVDELSEALLVQVGKLKEDLQNKIDSLTEENTRYRSLLEQSREKISALAARLP
                     QWQETQQ"
     gene            13610..13915
                     /locus_tag="ACJJDE_001099"
     CDS             13610..13915
                     /locus_tag="ACJJDE_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HGG7541040.1"
                     /translation="MNIEQVHIEVMHARLTVNTPAEEKDTLLQAVGMLNGKAEAIREG
                     GRVADSEKIVIMAALNVVHDLLKTSLNGGDLAIGDFARKIADMDNACQKALSRLAQE"
     gene            13921..14100
                     /gene="ssrS"
                     /locus_tag="ACJJDE_001100"
     ncRNA           13921..14100
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="ACJJDE_001100"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            14278..14709
                     /gene="rplM"
                     /locus_tag="ACJJDE_001101"
     CDS             14278..14709
                     /gene="rplM"
                     /locus_tag="ACJJDE_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HGG7541041.1"
                     /translation="MKTFSAKPHEVKREWFVIDAQDKVLGRVAAEVASRLRGKHKPEY
                     TPHVDTGDYIIVINADKLRVTGAKFEDKKYFRHSGFPGGIYERTFREMQEQFPGRALE
                     QAVKGMLPKGPLGYAMIKKLKVYAGAEHAHAAQQPKVLELK"
     gene            14719..15111
                     /gene="rpsI"
                     /locus_tag="ACJJDE_001102"
     CDS             14719..15111
                     /gene="rpsI"
                     /locus_tag="ACJJDE_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HGG7541042.1"
                     /translation="MNGKYYYGTGRRKSSVARVFLIKGTGQIIVNGRPVDEFFARETS
                     RMVVRQPLVLTENAESFDIKVNVVGGGETGQSGAIRHGITRALIDFDAALKPALSQAG
                     FVTRDAREVERKKPGLRKARRAKQFSKR"
     gene            15262..>15406
                     /locus_tag="ACJJDE_001103"
     CDS             15262..>15406
                     /locus_tag="ACJJDE_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541043.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRD"
BASE COUNT         3542 a         4298 c         4362 g         3204 t
ORIGIN      
        1 gccgaattac tttatttttt gatacgcaac tgaccggttg ccgtcattcc cgcacgggcg
       61 ggaatccatt tttgaaattc ggaaactgtt tttcaaatga tggtttctca agttttaagg
      121 cggattcccg cttacgcggg aatgacggaa tttgatgata tgccacattt aaagttaagt
      181 atgtttgcga taacgggcta agttttgccg acacggcaat tgaattttct tctttcggtt
      241 ttatccatcc cacaaagcct gaaacgcttt aaccaccgct tcgggatttg ccgcttcggt
      301 tacggcgcgg acggcggcga gtgaggaaac gccggtggcg agtacggctc gggcgttgtt
      361 caagtcgata ccgccgatgg cgacgacggg cgtgccgcct gcctgtttca catactcgca
      421 cagtttgtcc aagccttgcg gggcggtggg catttgcttg gtcgtggtcg ggaaaatcgc
      481 gccgctggcg acatagctgg ggtgtacgga cagggcgcgg tcgagttcgg cgacggagtg
      541 cgtactcaaa cccaagcgca aaccggcggc ggcaatggcg gcgaggtcgg cggtgtccat
      601 atcttcctgc ccgagatgca cgccgtatgc gcctgcttcg attgcctcgc gccagtggtc
      661 gttgatgaaa agctgcgtat ggctgccctg acaggcggcg acacagcggg cgatttcgcg
      721 tttcaattca tcgccgtgca gggccttgca gcgcagttgc accgtgtcgg cacctgcttt
      781 gaccatgcgc cccacccaat cggcggtggg gacgacggcg tagaatttga gcggggattt
      841 gagtggcggg aaggtcatgg ggttcctttc agacggcttt aatcttgtct tcggatatac
      901 gccaaaccgc tttcttcatc acgttcgggc gcgtcttttc cgtcaaacag tgccactgcc
      961 aatctgacgg cggcggcggt tacggcgggg gagatcatga aaccgtggcg gaaaaggccg
     1021 ttgatttcaa tcaggcgtcg ggcgcggttg taacggattt cggggttgtg gtggttgagc
     1081 gtggggcgca ggccggtggc gatttcgagg atgtcggctt cgccgaaggc ggggtggacg
     1141 gcatagagtg cggacaagag ttccaaccct gaacgcacgc tggcgggggc ttggctttcg
     1201 ctttcgattt gggtcgcgcc gatgacgaag acgtggtttt ctttcggggc gatgtagagc
     1261 ggataacgcg gatggagcag acgcacgggg cggttgagcg tgatttcggg tgtgtaaacc
     1321 cgcgccactt cgccgcgtat gccgcgcagg gtgctggtgt gctcggggga ttggttccac
     1381 gcggtttttg cgccgtagcc gcggcagtcg atcagccagt cgtattgggc ttgcaggcct
     1441 tcggggacgc attcgtgttc ccaatggcag gggacgttca gttcgtccaa agcgtcggca
     1501 agtgcagaca atatttgccg cccgtcgagc tggccttcgg tcggcaggta gatgccgtct
     1561 gaaaaacgtc cgccgagttg cggttcgcgt tcggcgattt catctgcgcg ccaacggacg
     1621 atttcgtcat ccgccacgcc gccgcgtttg agatggcgga cgaactcgct ggataatggc
     1681 ttgtcctgcc cgtgccacac aatcaggctg ccgttttcct gcatcatggc aggcgttttc
     1741 agatggcctc tgatgttgcg ccaaagcggg atgctctgcc tgcccagttt gatgacttca
     1801 ggcgtggctt cgaccgcttc cgccgcaggc gcgagcatgg cggcggcaac ataggcggcg
     1861 gcgtgttcgc cccggcggca gcctttatcg aaaagtgcaa tctgataacc ttgttctgca
     1921 agctgcagtg cggtcagcct tcccgagagg ccgccgccga ggatggcgat acgggtcatg
     1981 acgggttcct ttgtaaagat tgggtttttt taaagaaaag gcgcaccagt acggtggcaa
     2041 tggcaacggc agacattacg ggggcggtca gaccgatgct gctttcccag ccggacgaga
     2101 gcaggaagcg gtagaggatg aagcccgcca gccacagaac cagtccggca aagtcaaagc
     2161 cttcaatctc ctcacgccgt ttcaagacga aaaagtcggc aatcaaaacc gccgccatcg
     2221 gcgcaaatac cgagccgata agcagcagga agttttcata ttcggtaacg ggcagcatga
     2281 cggcaagcac cgtgccgatc agggtaacgc cgacagcgac gggtgtttcc gcaaaacgcg
     2341 cggaaatatt gtttgcactc gcgccggcgg agtacgcatc gagaaacgtt gtggtaacgg
     2401 tggagaggac gaccgccaaa atgcctgccg cacccaaacc tgcgcccagc aggatttttg
     2461 ccacgtcggt ttctccggtg aacaacgccg ctgccaaacc caaggcatac atccagcagc
     2521 cggtcagcgt gtaggcgagc gttgccgtca gggttgccgc aaacgggcgg cgcgcgtggc
     2581 gcgtgtagtc ggcggcaagc ggcagccagg aaagcggcat gacggcggac aattcgactg
     2641 ccgttccgaa gctcatgccg tctgaaacct gtgcggcggt gctgcctgcc gtggaaaaga
     2701 cttcggcact cagccacaga accgccaaca gcatcagcag catcgaaacg gttttcagcc
     2761 cgcctgtttt gcgtgcgccg aaaaccagcc acagcacaat cagcgcgccg tttgccaatg
     2821 cccaccagac aaaagattcg ccgtcccaca acactttgcc caaagcggag ctgaccgttg
     2881 cgccggcgta aatcatcacc gccgtccagc cggccagttg cagcatattc gccacggaaa
     2941 acagcactga accgcgtttg ccgaacgaca ggcgcacgct ttccatcgag ctgcgtccgg
     3001 tcagtgcgcc gatatacgcc gccgcaaaaa acagcgcgcc gccgacggca tgacccaaaa
     3061 gtagagccgc cagaccgcgt tgccagccca aaggcgcaag cagcgtaccc gtgctgattt
     3121 cggcaatcga gaccgccgcg ccgaaccaaa tcagcccgat ggcggcggaa gatgaaggag
     3181 aggaggcatt gcccgacata tgacgtcctt taaaaagaag gaaggtgggc ggggaagtgc
     3241 ggaaaaggga acggaagcct gataaggcat ttgacggttt gtttcctacg caggcattac
     3301 cccgacaggt tctacggatt ctgctttcgc aatctcagcc gcccggcggc ggcactccga
     3361 caaggagctt taagtgtaca caaaagcagg gggcgttggc aaaaatctta catttcaggc
     3421 ggcacggcgc atttctatag tggattaaca aaaatcagga caaggcgacg aagccgcaga
     3481 cagtacaaat agtacggcaa ggcgaggcaa caccgtactg ttttttgtta atccactata
     3541 taacaaatgc cgtataatca agcccctgat tttttatgcg ccgacactat gcatccgacc
     3601 tattccgccg tacaggcgcg gctgctcgaa gccaaccgcc tttcccccga actgctcgcc
     3661 aaaagcctgt gcatcatcgg cgcgcaccac gtcgattacg ccgacatcta ctgccagcgc
     3721 accgcttatg aaagctggca tttggaagag ggcatcgtca aatcgggcag cttccaaatc
     3781 aatcagggcg tgggcgtgcg cgccgtttcg ggcgataaaa ccgcctttgc ctacgccgac
     3841 agcctgtgca tcgattcgat aaaccgttcc gcccgcgccg tccgcgcgat tggggcggca
     3901 ggcggcaagg tgtccgccaa aatgccgtct gaaacgcgcg gcaagccggt ttgttccgcg
     3961 tccgacccca ttgccggcct cgattccgcc gccaaagtcg cgctgttgaa caaagtggaa
     4021 gcaatcgcca aagccgccga tccgcgcatc gtgcaagtga tggccggttt gacctgcgaa
     4081 tacgacatgg tttacctcgc ccgtctggac ggtaaacacg ctgccgatat ccgcccgatg
     4141 gtgcgcatga acgttaccgt tatcgccaaa cagggcgaac gccgcgaaca gggcagcgcg
     4201 ggcggcggcg gacgctacga cttggcttat ttcgatgaaa acttggtgca tcggtttgtc
     4261 gattccgccg tcaaacaagc cctgaccaat cttgaatccc gtcctgcgcc tgccggcgaa
     4321 atgaccgtcg ttttgggcaa cggctggccg ggcgtgttgc tgcacgaagc ggtcggacac
     4381 ggtttggaag gcgatttcaa ccgcaaggga accagcgtct tttccggccg aatcggcgag
     4441 cgcgtcgccg ccaaaggcgt taccgttgtg gatcaaggcg atattgccgg ccggcgcggt
     4501 tcgctcaaca tcgacgacga aggcaacgaa acccgccgca ccgtattgat tgaagacggc
     4561 atcttggtcg gttatatgca ggacgaaacc aatgcccgcc tgatgggcac gcaatcgacc
     4621 ggcaacggcc gccgcgaaag ctacgcctcc gtccctatgc cgcgcatgac caataccttt
     4681 atggaaaacg gcggctacga acccgacgaa atcatcgcgt ccatcgacaa aggcatttac
     4741 gccgtcaact tcggcggcgg acaggtggac attaccagcg gcaaattcgt gttcagcgcg
     4801 tccgaagcgt ggtgggtgga gggcggcagg ctgcaatacc ccgtcaaagg cgcgaccatt
     4861 atcggcaacg gccccgaagt gctgaaacac gtttccatga taggcaacga tactgcgctc
     4921 gacagcggtg tcggcgtgtg cggcaaagaa gggcagagcg tccccgtcgg cgtggggcaa
     4981 ccgactttgc ggattgatgc cggactgacc gtcggcggca gcgcaatctg acgcggaatc
     5041 cggcacgatg ccgtctgaaa ggttttcagg cggcctttta cattaggata aaaccatgca
     5101 ggaacagaat cggaaatcaa gttttcccat agtgatgttg ctggtgtcgg ttgccctgtg
     5161 gatagcgtct ttatccaatg ttgcatttta tttgggcaat catggaagca tggagggttt
     5221 gaccgttttg attttggggt cgatatttgc ttctttggat atcaggtatt gtgcggtcta
     5281 tgcgaattat gtttggttgg cggccattgt tttgctggcg ttgcggaaga aggtcgtgcc
     5341 tgtccatgcg gcactttggg gcttggcgtt ggtggctttc agtgtgaaag ccgtatacgt
     5401 cgatgaagca gggaatacat cggatattgt gcgctacggt gcaggatttt atttgtggta
     5461 tgccgcattt gcggttgcca ccatcggtac gtttgccgga aagaataagg aaagaaaagc
     5521 cgcatcggcg gcagacggga taaaaaatga cgtttgacga atggttgggc ttgtcaaaac
     5581 tgcctaaaat tgaagcaaga atgctgctgc aatatgtttc ggaatatacg cgcgtgcagt
     5641 tgttgacgcg gggcggggaa gaaatgccgg acgaagtccg acagcgggcg gacaggctgg
     5701 cgcaacgccg tctgaacggc gagccggttg cctatatttt aggtgtgcgc gaattttatg
     5761 gcagacgctt tacagtcaat ccgagcgtgc tgattccgcg ccccgaaacc gaacacttgg
     5821 tcgaagccgt attggcgcgc ctgcccgaaa acgggcgcgt gtgggatttg gggacgggca
     5881 gcggcgcggt tgccgtaacc gtcgcactcg aacgccccga tgcgtttgtg cgcgcatccg
     5941 acatcagcac gcccgccctt gaaacggcgc ggaaaaatgc ggcagatttg ggcgcgcggg
     6001 tcgaatttgc acacggttcg tggttcgaca ccgatatgcc gtctgaaggg aaatgggaca
     6061 tcatcgtgtc caacccgccc tatatcgaaa acggcgataa acatttgttg caaggcgatt
     6121 tgcggtttga gccgcaaatc gcgctgaccg acttttcaga cggcctaagc tgcatccgca
     6181 ccttggcgca aggcgcgccc gaccgtttgg cggaaggcgg ttttttgttg ttggaacacg
     6241 gtttcgatca gggcgcggcg gtgcgcggcg tgttggcgga gaatggtttt tcaggagtgg
     6301 aaaccctgcc ggacttggcg ggtttggaca gggttacgct ggggaagtat atgaagcatt
     6361 tgaaataatt gtttgcaaaa ttggcgggtt ttccattatt gggttatgat gtgtttcgat
     6421 atgtaaacat ttataggttt ggagcgataa acaatgaatg cagtcgtagt tgccgtaatc
     6481 gttatgctgg tgctgtcgct gtcgcgcgtg cacgtggtat tgagcctgac ggtcggcgcg
     6541 tttgtcggcg gcgcggtggc gggtatgccg ctgcaaaaca ttgccgatgc ggcgggacag
     6601 gtcagtcagg cggggattat ccccgtgttc aacaaaggtt tggaaggcgg tgcgaagatt
     6661 gcgctttctt atgcgatgct cggcgcgttt gcaatggcga ttacccattc cggcctgccg
     6721 caacagcttg ccggcgcggt cgtccgcaag ctgaaccggg gcggtatgcc cgacagcgtg
     6781 cgttcgggcg agggcgcggt caaatggctg ctgctttcca tcatccttgt gatgggcatt
     6841 atgagtcaga acatcatccc catccacatc gcctttatcc cgatgattgt tccgccgctg
     6901 cttttggtgt tcaaccgcct gaaaatcgac cgccgcctga ttgcgtgcgt catcactttc
     6961 gggctggtta cgacttatat gttcctgcct tacggcttcg gcgcgatttt tttgaatgaa
     7021 atcctgttgg gcaacatcca ttccgccgcg ccgcagcttg atgtgaaaaa catcaacgta
     7081 atggcggcaa tggcgattcc cgcgttggga atgctggccg gactcctgct ggtgtttgtc
     7141 cattaccgca aaccgcgcct gtaccaaagc aacaatgccg atacggcggg caacgccgat
     7201 gcggcaaacc gtccgcagcc gtccgcctac cgcagcctgg ccgccgccgc cgccattgcc
     7261 gtatgctttg ccatccagtt gatgtatgaa gactcgctgg tgttgggcgc gatgctcggt
     7321 ttcgccgtat ttatgatgtt gggcgtcatc aaccgcgaca aggcaaacga cgtattcggc
     7381 gaaggcatca agatgatggc gatggtcggc ttcattatga ttgccgcgca gggttttgcc
     7441 gccgtgatga atgcgaccgg gcatattcag ccgctggtgg aaagcagtat ggcgatattc
     7501 ggcaacagca aaggtatggc ggcgttggcg atgctggtgg tggggctttt ggtaacgatg
     7561 ggcatcggtt cgtccttttc cactttgccg attattgccg cgatttatgt gcctttgtgt
     7621 gtcggtttgg gtttttcgcc gcttgccacc gtcgccattg tcggcacggc gggggcgttg
     7681 ggcgatgccg gttcgcctgc gtccgattcc acgctgggcc cgacgatggg gctgaacgcc
     7741 gacgggcagc acgaccacat ccgcgattcc gttatcccga ccttcatcca ctacaacatc
     7801 ccgctgctga ttgccggctg gattgccgcg atggtgctgt aaatggacgc ggttcaagag
     7861 ttggaacgcc gtattgtcga actggaaatc caatccgcgc ttcaggagga cgtaatcgcc
     7921 ggcctgaacg cgatggtggc ggaattgcgg cagacgctgg atttgcagca ggctcagttg
     7981 aggctgctgt atcaaaaaat gcaggacagg aatcccgacg cgcaagagcc gtattccctg
     8041 cgcgacgaga ttccgccgca ttattgatgc gccgccgtat ccggatttcc ttaaaaaagg
     8101 ctgtgtttga atattttgcc gatgcaaacc taagatgtaa ctttaatcag tcggacaaaa
     8161 tgccttttat ccgatggaac cgttttccgc ccgaacggaa ataagcggtt ttcccctgta
     8221 aacagataaa accaaccggg tattcataca cagccaaaaa aaagccgtcc gaacccaaag
     8281 gggacagacg gccaaacaca ttacggggaa aacgtcttac tcaatgagtc tgcgaaacag
     8341 acattgctaa aacaactgca attataaggt aagtttattt ttttgcaaag aaatgtaaat
     8401 ttttaaattt ttaaaaccgt tccgccgcat ccgtttggat accgtctgaa acggcggcag
     8461 ggttttaccg ttccgcgccg caaatcgggc attcggggtt gcgcggcagg tcgaaatatt
     8521 gccagccccc ttccaaggca cggtaaaccg ccagcctgcc gtgcgacggt tcgcccgcat
     8581 ccagcaggat tttcagagcc tccgccgctt gggtactgcc gatgatgccg accagcggcg
     8641 agaacacgcc gaagagggaa cagatgccgt ctgaagccga tccgccgtca aacaggcagg
     8701 cgtaacacgg cgagtcgggc aagtcgggac ggtacacggc aagttgccct tcaaagcgca
     8761 ccgctgctcc tgaaaccagc ggtgttttcg tttgtacgca gacacggttg acggcttggc
     8821 gcgtggcgta gttgtcgcag cagtctaaaa cgatgtcggc ggtttgaacc aaaccggtca
     8881 ggcggcagcc gtcgagtttt tcgttgacgg tgcggacatc gacgttatgg ttgatgcgtt
     8941 tcaggcggtc tgccaaggct tcggctttgg gcttgccgac atcgccctcg tcaaatgcga
     9001 cttggcgttg caggttgtgc agctcgaccg tgtcggaatc ggctatggtc agcgtgccga
     9061 tgccggaagc ggcgagatag ggcagggcgg cggcacccaa accgccgcag ccgacgacca
     9121 aaatatgcgc ggcggaaagt ttctgctgcc cttcgatgcc gatttcgtcc aagaggatgt
     9181 ggcggctgta ccgcagcagg aatgcatcgt cgttgtcgtg ttcggtcgtg gtcatgatga
     9241 tgttcggaaa aaacagttgt gggcgattgt aacgctgccg tcgggcggcg ttcaacttca
     9301 gacggcattt cgggacacgg gcggttaaag tgtgaacggt ttggcacgga tgcggcattt
     9361 gaggtacatt tacagtattt acggcaatga gagaaaaatc atgcaactgc atattctgaa
     9421 caatccaaag gacgcggctt tggcggcgga cgcggaattt ctgaaacaat ccctgttcaa
     9481 cctcctgcac gaagaagcct cgccattggt tgtcgaaacg gtcaaactct tgtccacttc
     9541 cgacgacagc gcggcattga ttgaaaaagt attgccgcaa ttggacgaac aacaaaccca
     9601 cgatttaacc ttggcctgcg gcctgttcgc ccagattttg aatatcgccg aagacgtgca
     9661 ccacgaacgc cgccgccaaa tccacgaaga agccggacgc ggcggcgcgg aaggcagcct
     9721 gacggaaacc gtccgcaggc tcaaagcggg gaaagccgac ggcaaatcgg tgcagcggca
     9781 gttggacaat acgtccgtta ccgccgtttt gaccgcgcac ccgaccgaag tgcaacgcca
     9841 aaccgtctta agcttcaacc gccgcatccg cgcactgttg ccgcaacgcg aacgctgcac
     9901 caatgccgac gcgctggcac ggctgcgccg cgaaatcgac actatcctgc tgggcttgtg
     9961 gcagaccagc gaaacgcgcc gccacaaact cagcgtcaac gacgaaatca acaacggcgt
    10021 gtccatcttc ccgatgagct ttttcgaagc cctgcccaag ctctaccgca atatggaaca
    10081 cgactttcag atggtctatc ccgatgtctg cgttccgaac atcctcaaaa tcggcggctg
    10141 gatcggtggc gaccgcgacg gcaatccgtt cgtttctgcc gaaaccttgc gttttgcctt
    10201 ccgccgccac gccgatgccg tgttccgttt ttaccgtggc gaactcgaca aactttaccg
    10261 cgaactgccg ctctccatcc gccgcgtcaa agtcaacgac gacgtaatgg cactggcagc
    10321 cctctcgcct gacgaagaac ttgcccgcac ggaagaaccc taccgccgcg ccattgctta
    10381 catcatggcg cgcgctatgg gcaaagcgcg cgcgctcggt ttgggcatgg gctgcaaatt
    10441 cggctttctc gagccttatg cttcggcaca agaatttctc gatgatttga aaaaattgca
    10501 acgttccctt atcgacaacg gcagccgcct gcttgccgaa ggccgtctgg cagacctcat
    10561 ccgttccgtg tccgtgttcg gcttccacat gatgccgctc gacctgcgcc aacacgcagg
    10621 caaacacgcc gatgtggttg ccgagctttt ccaacacgca ggcttggaag actacaacag
    10681 cctgaatgaa gagcaaaaac aagccgccct gttgcgcgaa ttgagccatc aacgtccact
    10741 gtacagtccg ttcatcacat acagcgacca tactcgccac gaactggcga ttttcaatga
    10801 agcgcgcaaa atcaaagacg aattcggcga agatgccgtt acgcaaagca ttatttccaa
    10861 ctgcgaacaa cccagcgacc tgctcgcctt ggcattgctg ctgaaagaaa gcggcctgtt
    10921 ggcggtagaa aacggcaaac cgcaaagccg catcaatatc gtgccgctgt ttgaaaccat
    10981 cgaagcgttg gaaaacgcct gtccggtcat ggaaaccatg ttccgcctcg actggtacga
    11041 tgccctgctc gaaagccgcg gcaatatcca agaaatcatg ctgggctact ccgactccaa
    11101 caaggacggc ggctacgtta ccagctcatg gtgcctctat caggcggaat tgggcttggt
    11161 cgaactcttc aaaaaatacg atgtccgcat gcgcctgttc cacggacgcg gcggcagcgt
    11221 cggacgcggc ggcggccctt cttaccaagc cattttggcg caaccggccg gcagcgtggc
    11281 gggacaaatc cgcattaccg aacaaggcga agtcattacc gccaaatacg ccgaccccgg
    11341 caatgcccaa cgcaacttgg aaaccttggt tgccgcgact ttggaagcca gcatcctgcc
    11401 ggataaaaaa gaccctgatg ccaaactgat gcaggcattg tcggacgtat cgttcaaata
    11461 ctaccgcgaa ctgattaccc accccgactt catcgactac ttcctgcaaa ccagcccgat
    11521 tcaggaaatc gccaccctca acctcggcag ccgtcctgcc agccgcaaga ccttagcgcg
    11581 gattcaagac ttgcgcgcga ttccgtgggt attttcctgg atgcaaaacc gcctcatgct
    11641 gcctgcttgg tacggtttcg gcagcgcggt ggaaaccttg tgcgaagaca aacccgaaac
    11701 gctcgccgcc ctgcgcgaac acgcccaaag caacccgttc ttccaagcca tgctttccaa
    11761 tatggagcaa gtgatggcga aaaccgacat caccctcgcg gaaaactatg ccggcttgag
    11821 cgaatcgccg gaaaaagccg ccgtcatctt cggcatgatt aaggaagaat accaacgcag
    11881 ccgcaaagcc ctgctcgacc tgctgcaaac cgaagaactt ttacgcgaca accgcagcct
    11941 cgcccgttcg cttgccttga ggattcccta cctgaacgcg ctcaacggcc tgcaggtcgc
    12001 catgctcaaa cgcctgcgta aagaacccga caatccgcac gcgctgctga tggttcacct
    12061 gaccatcaac ggcgtggcgc aaggtttgcg caatacaggc tgattgtgcc gcatcggggc
    12121 aaaatgccgt ctgaacacct ttcagacggc atttccctga ccgcacttgc agagaaacac
    12181 cgattgtttt aaagtgaacg gcagtgatat gttgaaagac gaccaatgaa aattaccgtt
    12241 atcggcgcag gttcgtgggg tacggcgctc gccctgcact tttcccaaca cggcaaccgc
    12301 gtatccctgt ggacgcgcaa cgcagaccaa gtccgccaaa tgcaggaagc gcgtgaaaac
    12361 aaacgcggac tgcccggctt ttcctttccc gaaaccttgg aagtgtgtgc ggatttggca
    12421 gacgcgctca aagacagcgg acttgtcctt atcgtaacct ccgttgccgg attgagaagc
    12481 agcgcagagc tgctcaaaca gtacggcgcg ggacacctcc ccgtcctcgc cgcctgcaaa
    12541 ggattcgagc aggatacagg gctgctgacc tttcaagtat tgaaagaagt attgcccgac
    12601 aataagaaaa tcggcgtact ctccggcccg agttttgcac aggaactcgc caaacaactg
    12661 ccctgtgccg tcgtcctcgc ctccgaaaac caagagtgga ttgaagaact cgtaccgcag
    12721 ctcaacacga ctgtcatgag gctttacggc agtaccgacg ttatcggcgt ggcggttggc
    12781 ggcgcggtaa aaaatgttat ggcgattgcc accggattgt ccgatggcct agagtacggg
    12841 cttaacgccc gtgccgcact ggttacgcgc ggattagctg aaattacccg ccttgcctcc
    12901 gcaatgggcg cacagcccaa aaccatgatg gggctggcag gcatcggcga cctcatcttg
    12961 acctgcactg gcgcactctc acgcaaccgc cgcgtcggct tgggtttggc agaaggcaag
    13021 gaactgcatc aggtgctggt cgaaatcgga cacgtttccg aaggggtcag cacgatagaa
    13081 gaagtcttca atactgcctg taagtaccaa atcgatatgc cgattaccca aaccctgctg
    13141 caactcatcc gtaaggaaat gacccctcag caggtcgtcg aaagactgat ggaacgcagc
    13201 gcgcgtttcg aataaacaac agacagatgc cgtctgaggc cttcagacgg catacggaca
    13261 ggtaaggtta tgaaacaaaa tatcgaaaaa ctcgaaagca gcgtttatac gctggtacaa
    13321 aaattcgaaa ccctcgtcag cgaaaaccgc cgcctcaaag aaaccgtcgc cgaactcaaa
    13381 cgggcgcacg agcggcaaaa actcgaacac gaaaccgccg tcgacgaact cagcgaagcc
    13441 ctgctcgtcc aagtcggcaa actcaaagaa gacctgcaaa acaaaattga cagcctgaca
    13501 gaagaaaata cacgataccg cagcctgctc gaacagagca gggaaaaaat cagcgcactg
    13561 gcagcgcgcc tcccccaatg gcaggaaacg cagcaataag gattaaagga tgaacatcga
    13621 acaagtccac atcgaagtca tgcacgcccg gctgaccgtc aacacgccgg cagaagaaaa
    13681 agacacactg ttgcaggcag tcggaatgct caacggcaaa gccgaagcca tccgcgaagg
    13741 cggacgcgtc gcggacagcg aaaaaatcgt cattatggcc gcgctcaacg tcgtccacga
    13801 cctgttgaaa acctccctga acggcggcga tttggcaatc ggcgattttg cgcgtaaaat
    13861 agccgatatg gacaacgcct gccaaaaagc actatcccgc ttggcgcagg aataacccct
    13921 ttttccctgc ggtgtccgcg aaggcatata ttcctttgaa ccaataagtt cgcttaaggt
    13981 tgccgggagc agtagtgggc gcgagcgtcc ttttgcggac gcacccgaaa ctacccgagg
    14041 cagccgcctt gtcagcaagg ttcaagcgga ttcggccgaa acggctctcg cggggattcc
    14101 cattcaaaac cgcatcgcaa cgatgcggtt tttcacattg gccgccgccc cgcccgaaaa
    14161 agcagtatgc agtctgccga aatccggaaa atccttccgt aacgcggtaa tgcgattgac
    14221 aaaatcgaat cctgtcttta aaatttacaa ctttctatat ctatttggat ttccactatg
    14281 aaaacctttt cagcgaaacc ccacgaggtg aagcgcgaat ggttcgtcat cgatgcccaa
    14341 gacaaagtct tgggtcgcgt tgcggccgaa gtcgccagcc gtctgcgtgg caaacacaaa
    14401 cctgaataca ccccccacgt cgataccggc gattacatca ttgttatcaa tgcggacaaa
    14461 ctgcgtgtaa ccggtgccaa attcgaagat aaaaaatact tccgccattc cggttttcca
    14521 ggcggtatct acgaacgcac tttccgcgaa atgcaagagc aattcccggg ccgcgctttg
    14581 gaacaagctg taaaaggtat gctgcccaaa ggtcctttgg gttacgccat gattaaaaaa
    14641 ctgaaagtgt atgcgggtgc ggaacacgcc catgctgcgc aacaacccaa agttttggaa
    14701 ctgaaataag gacgcgacat gaacggtaaa tactactacg gcacaggccg ccgcaaaagt
    14761 tcagtggctc gtgtattcct gattaaaggt acaggtcaaa tcatcgtaaa cggccgtccc
    14821 gttgacgaat tcttcgcacg cgaaaccagc cgaatggttg ttcgccaacc cttggttctg
    14881 actgaaaacg ccgaatcttt cgacatcaaa gtcaatgttg ttggcggcgg cgaaaccggc
    14941 cagtccggcg caatccgcca cggcattacc cgtgccctga tcgacttcga tgccgcgttg
    15001 aaacccgcct tgtctcaagc tggttttgtt acccgcgatg cccgcgaagt cgaacgtaaa
    15061 aaaccgggtc tgcgcaaagc acgccgtgca aaacaattct ccaaacgtta atgttggaaa
    15121 ttcaaaaaac cctgcttatc gcagggtttt ttatttgtag tagacggttt cccattggca
    15181 atctaaagat tacagattga gacctttgca aaattcccca aaatccccta aattcccacc
    15241 aagacattta ggggatttct catgagcacc ttcttccagc aaaccgccca agccatgatt
    15301 gccaaacaca tcgaccgttt cccgctattg aagttggatc aggtgattga ttggcaaccg
    15361 atcgaacagt acctgaatcg tcaaagaacc cgttaccttc gagacc
//
LOCUS       DBBZXU010000041        15261 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.041, whole genome shotgun sequence.
ACCESSION   DBBZXU010000041 DBBZXU010000000
VERSION     DBBZXU010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15261
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.041"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(51..536)
                     /locus_tag="ACJJDE_001104"
     CDS             complement(51..536)
                     /locus_tag="ACJJDE_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HGG7541044.1"
                     /translation="MRFFGIGFLVLLFLEIMSIVWVADWLGGGWTLFLMAATFAAGVL
                     MLRHTGLSGLLLAGAAMRSGGRVSVYQMLWPIRYTVAAVCLMSPGFVSSVLAVLLLLP
                     FKGGAVLQAGGAENFFNMNQSGRKEGFSRDDDIIEGEYTVEEPYGGNRSRNAIEHKKD
                     E"
     gene            complement(866..1174)
                     /locus_tag="ACJJDE_001105"
     CDS             complement(866..1174)
                     /locus_tag="ACJJDE_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541045.1"
                     /translation="MTNNVDLKVPAKRYFTLDELCGLLQISPYGFAQWQHDHGVVVGY
                     GGERYTRLDVVKLLKLQSTFAPYAEGAESGSDGNRPVTLQEIGDGLKELLADLDKELC
                     "
     gene            complement(1158..1460)
                     /locus_tag="ACJJDE_001106"
     CDS             complement(1158..1460)
                     /locus_tag="ACJJDE_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002641098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HGG7541046.1"
                     /translation="MTLTKAELADILVDKVSNVTKNDAKEIVELFFEEIRSTLASGEE
                     IKISGFGNFQLRDKPQRPGRNPKTGEEVPITARRVVTFHASQKLKSMVEHYYDKQR"
     gene            complement(1534..3897)
                     /gene="pheT"
                     /locus_tag="ACJJDE_001107"
     CDS             complement(1534..3897)
                     /gene="pheT"
                     /locus_tag="ACJJDE_001107"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HGG7541047.1"
                     /translation="MQFSYSWLKTQADTELSSDKLEHLLTMSGLEVEEAETAAPAFAG
                     VVIAEVKSVEKHPDADRLNVTRVDAGTGGLVQIVCGAPNVKAGIKVPCSLPGAVLPGN
                     FKIKPTKMRGVPSNGMLCSTNELGLPDDGVDGLHILPEDAPVGTNIREYLDLDDTLFT
                     LKITPNRADCLSIKGIAREVSALTGCAFRQPEIHTAPITGSRKQPVQINAPADCGRFI
                     SRVIENVNAKAATPDWMKQRLERSGIRSISALVDIGNYVMLEIGQPMHVFDADKLSGS
                     LHIRRAREGETLECLNEKTVSLSENTLVVADEKGVLSLAGLMGGAASAVSDGTQNIVL
                     EAAWFAPEIIAGKSRQYGFGSDSSFRFERGVDYRLQADAMERATELVLQICGGAAGEM
                     VEAQGKLPEAKQVGLRLDRLKTVLGVDIPAEQVETILQHLGLQPEKTAEGFRVTAPSF
                     RFDIEIEADLIEEIGRVYGYENIPDDYTSGRLKMLELPETRRPRFAVYNEMAAHGYRE
                     VVSYAFVDEQWEQDFAANADPIRLQNPLAAQYAVMRSTLIGGLVEILQNNLNRKQNRV
                     RVFEIARVFGKGSDGRFVQNERIGGLWYGAAMPEQWGGKTRNADFYDIKADVENLLKN
                     KAVEFVKTGHPALHPGRAANIVSDGKVIGFVGELHPKWLQKYDLPQAPLVFEIDMAAV
                     LECGKTRYRAVSKFQPVRRDLAFVMPEAMSHDDLLLVLKGAANKLVQEISVFDVYRGT
                     GLPEGMKSVAVKVILQDMENTLTDEAVEPLIGKLIGAATAAGARLRS"
     gene            complement(3922..4572)
                     /locus_tag="ACJJDE_001108"
     CDS             complement(3922..4572)
                     /locus_tag="ACJJDE_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG7541048.1"
                     /translation="MITISNEDNMILMSRYPDKYFDLAIVDPPYGILNKTKRGGDYKF
                     NMNEYSQWDIKPDQTYFNELFRVSKNQIIWGGNYFGELWLRSEYNKGFIIWDKNQPET
                     LNNFSMAEMAWSSFDRPSKIFRFSVRKNRNKTHPTQKPVELYQWLLKMYAKQGDKILD
                     THLGSGTLAIACCIAQFDLTACEINSDYYQQSIEKIKNNLPEARISFGHPGYCIIE"
     gene            complement(4569..6038)
                     /locus_tag="ACJJDE_001109"
     CDS             complement(4569..6038)
                     /locus_tag="ACJJDE_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease"
                     /protein_id="HGG7541049.1"
                     /translation="MTTARWVIDKHLQNFHILCKFAGILKTNSFISVEDKAKLSEKLE
                     KLDLYHRRNTGKSLDATTHKIKELSFYMFGYRDVCGQVTQKFLFSPLGNLFLKHLDNN
                     EYIQKIFLTMLWAIPFPHPYIKTDESIQLYPMRLIFKLLSDERLDCKLFSYEYIYLIS
                     FVKSADQNSYEKLVQDILVLRTCAEVKIKHQLTAENSRSHAYVNAAHEWESYFSKTLT
                     DAGVLQKTDGKIICRLKHGKTETYRKVTSSEFSIPKQLQEFVKKLQSAYSFSEMPLNL
                     NDSDRLKIDVIKEIYSFYPKELLEEIGELKDEAAYELLHLPRLIEQYADNNNGTEAYL
                     FEDVLEMGFNMFYNVEAKKIGGPGNTDLECLYITQKRKFAVEAKSTKNKLSGINSGRL
                     EDHKNKIKAIYTIVVTPRYVPAVLSDIRNCPIVIIRANTFAEFLYNCLINRSSIPEID
                     YRYFDEIIIKNLGKDISSEISNLTMQQFASNTTMEAYST"
     gene            complement(6041..7099)
                     /locus_tag="ACJJDE_001110"
     CDS             complement(6041..7099)
                     /locus_tag="ACJJDE_001110"
                     /EC_number="2.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003886 - DNA
                     (cytosine-5-)-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006304 - DNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HGG7541050.1"
                     /translation="MMIGASLFSSAGIAETYLHNAGIKIIAANELVPERANLYKALYP
                     ESKMIIGDILHEEVFQNLIQSVPNRLDFLIASPPCQGMSVAGKNRNIQEMANDKRNHL
                     IFRVIEFILLKRPTFVLIENVPFFLKIKLPYKGTLQTVEVILQDLFGCEYYIQTHIFD
                     SADYGVAQHRKRAIIRMNKHSTIWGMPEKVTKTISVRDAISFLPSIESGQKSNVKWHF
                     ARTHAPEHIIWLKNTPTGRSAFDNIEHYPKKKNGEKIKSYNTTYRRMEWDAPAPTITI
                     RNDAISSQLNVHPGRSMPDGTYSDARVLTPLELMLLTSLPIDWNIPDDTSELLIRQCI
                     GESIPPLLIKKIVERIGK"
     gene            complement(7282..8274)
                     /gene="pheS"
                     /locus_tag="ACJJDE_001111"
     CDS             complement(7282..8274)
                     /gene="pheS"
                     /locus_tag="ACJJDE_001111"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HGG7541051.1"
                     /translation="MENVNRIVAEGIAAVEAAQDFNALEQIKARYLGKTGELTGLLKT
                     LGQMSPEERKTIGAHINECKNRFQTAFNAKRDALNEAKLQARLAAEALDITLPGRAQE
                     GGSLHPVTLTLQRVVELFHGMGFEVADGPEIEDDFHNFQALNIPANHPARAMQDTFYV
                     ENGDVLRTHTSPIQIRYMLDKKEPPIRIIAPGRVYRVDSDATHSPMFHQAEGLWVEEG
                     VTFADLKAVFTDFIRRFFERDDLQVRFRPSFFPFTEPSAEIDIMGENGKWLEVGGCGM
                     VHPNVLKNVNIDSEKYTGFAFGIGLDRFAMLRYNVNDLRLFFDNDLNFLKQFVK"
     gene            complement(8620..8979)
                     /gene="rplT"
                     /locus_tag="ACJJDE_001112"
     CDS             complement(8620..8979)
                     /gene="rplT"
                     /locus_tag="ACJJDE_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000124858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HGG7541052.1"
                     /translation="MPRVKRGVTARARHQKIFALAKGYRGRRKNVYRVAKQAVMKAGQ
                     YAYRDRRQRKRQFRQLWIVRINAGARENGLSYSKFMNGLKRASIEIDRKVLADLAVFD
                     KAAFAQLVEKAKAALAA"
     gene            complement(8992..9189)
                     /gene="rpmI"
                     /locus_tag="ACJJDE_001113"
     CDS             complement(8992..9189)
                     /gene="rpmI"
                     /locus_tag="ACJJDE_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HGG7541053.1"
                     /translation="MPKMKTKSSAKKRFKVLGNGGVKRAHAFKRHILTKKTTKNKRQL
                     RGTSMVNDRDLASVAKMLPYA"
     gene            complement(9336..9857)
                     /gene="infC"
                     /locus_tag="ACJJDE_001114"
     CDS             complement(9336..9857)
                     /gene="infC"
                     /locus_tag="ACJJDE_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HGG7541054.1"
                     /translation="MIAQEREARINGEITAKEVRLISESGEQLGVVSVREALAMAEGQ
                     DVDLVEISPTAKPPVCKLMDYGKYKYQQAKKRDEAKKNQKQVQIKEIKFRPGTDEGDY
                     QIKMRNINRFLADGDKVKVTLRFRGREMAHQQLGAQLLERVKEDLAEVAQIESFPKME
                     GRQMVMMIAPKKK"
     gene            complement(9875..11788)
                     /gene="thrS"
                     /locus_tag="ACJJDE_001115"
     CDS             complement(9875..11788)
                     /gene="thrS"
                     /locus_tag="ACJJDE_001115"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HGG7541055.1"
                     /translation="MLNITLPDGSVRQYESPVTVAQIAASIGAGLAKAAVAGRVNGKL
                     VDACDPIVEDSAVQIITPKDQEGIEIIRHSCAHLVGHAVKQLYPNAKMVIGPVIEEGF
                     YYDIATEKPFTPEDVAAIEARMKELIAQDYDVVKIMTPRAEAIKIFQERGEEYKLRLI
                     DDMPEVEAMGMYHHQEYVDMCRGPHVPNTRFLKNFKLTKLAGAYWRGDSNNEMLQRIY
                     GTAWATKDELKAYIQRIEEAEKRDHRKLGKQLDLFHLQDEAPGMVFWHPKGWALWQVI
                     EQHMRKELNAAGYKEVKTPQIMDKTFWEKSGHWDNYKDNMFVTSSEKREYAVKPMNCP
                     GHVQIFNNGLRSYRDLPMRLAEFGSCHRNEPSGALHGLMRVRGFVQDDAHIFCTEDQI
                     VSEARAFNELLVRIYKQFGFHDVSVKLSLRPEKRAGSDDVWDKAEQGLREALTACGVE
                     WGELPGEGAFYGPKIEYHVRDALGRSWQCGTLQLDFVLPERLNAEYVTENNDRARPVM
                     LHRAILGSLERFIGILIENHAGSFPLWLAPVQMVIMNITENQADYCREVAAKLQAAGF
                     RAELDLRNEKIGYKIRDNSQYRFPYQIVVGDKEKQENKVAVRRKAEDLGSLDLDDFIA
                     QLQQEITDALVNH"
     gene            complement(11842..11918)
                     /locus_tag="ACJJDE_001116"
     tRNA            complement(11842..11918)
                     /locus_tag="ACJJDE_001116"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11882..11884),aa:Val,seq:gac)
     gene            12097..13212
                     /gene="tgt"
                     /locus_tag="ACJJDE_001117"
     CDS             12097..13212
                     /gene="tgt"
                     /locus_tag="ACJJDE_001117"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HGG7541056.1"
                     /translation="MLKFTLHKKDGYARRGTLELNHGKIETPVFMPVGTYGSVKAMNP
                     QNLHDIKAQIILGNTYHLWLRPGLEVVEQFGGLHGFIGWDKPILTDSGGFQVFSLSDM
                     RKLTEEGCTFKSPINGDKLFLSPEISMKIQTVLNSDIAMQLDECTPGEATREQARKSL
                     QMSLRWAERSKKAFEDLKNPNALFGIVQGAMYEDLREESLKGLEELDFPGLAIGGLSV
                     GEPKPEMYRMLRAVGPILPEHKPHYLMGVGTPEDLVYGVAHGVDMFDCVMPTRNARNG
                     WLFTRFGDLKIKNAKHKLDKRPIDESCTCYACQNFSRAYLHHLHRAGEILGAQLNTIH
                     NLHFYQVIMAEMRDAIEQGKFADWQARFHENRARGTD"
     gene            13222..14304
                     /gene="hemH"
                     /locus_tag="ACJJDE_001118"
     CDS             13222..14304
                     /gene="hemH"
                     /locus_tag="ACJJDE_001118"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HGG7541057.1"
                     /translation="MPSEAASDGILPLYPTRTIFQKPIMLPFLPEPSLSYTQQNRTAV
                     LLLNLGTPDAPTAQAVRPYLKSFLTDRRVVELPKWLWYPILHGLVLTLRPKKSAHAYE
                     KIWFKEGSPLEVYTARQAAALAERMPDLIVRHAMTYGNPSVADVLSELKAQGAGRLLV
                     IPMYPQYAASSSGAAVDKVCEQLLLQRNQMSVRTVSRFYDDTGYIDAMKNHILRYWAE
                     HGRGKKLMLSFHGVPQKHYDLGDPYPDECRHTAKLLAEALELTEDQYVVSFQSQFGRA
                     KWVTPSTQDLFGKLPKQGVTELDVFCPGFLADCLETMEEIALMGREQFYEAGGKSYRY
                     IPCLNDNPDWIDALVALAEENLGGWR"
     gene            14496..14897
                     /locus_tag="ACJJDE_001119"
     CDS             14496..14897
                     /locus_tag="ACJJDE_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7541058.1"
                     /translation="MNTTRLPTALVLGCLCAAASAADNSIMTKGQKVYESNCVACHGK
                     KGEGRGTMFPPLYRSDFIMKKPQVLLHSMVKGINGTIKVNGKTYNGFMPATAISDADI
                     AAVATYIMNAFDNGGGSVTEKDVKQAKGKKN"
     gene            complement(14960..15250)
                     /locus_tag="ACJJDE_001120"
     CDS             complement(14960..15250)
                     /locus_tag="ACJJDE_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541059.1"
                     /translation="MAKYFTETGIGVREHFDFFGEFVVSPAARSGDLALAYGLRLEAG
                     EEGLSLAELFDKRSDSQEPVECGRIDIGGFMLTAKEVDGGGNIGSMGLKVPR"
BASE COUNT         4050 a         3899 c         3240 g         4072 t
ORIGIN      
        1 tcaaaccgga aaaatgccgt ctgaaccttc agacggcatt ccattcacat ttattcgtct
       61 tttttgtgtt cgatggcgtt tcgggaacga ttgccgccgt aaggctcttc aaccgtatat
      121 tccccctcga taatatcgtc atcgcgggaa aagccctctt ttctgcccga ttggttcatg
      181 ttgaaaaaat tttccgcacc tcctgcctgc aacactgcac ctcccttaaa cggcagcagc
      241 agcaataccg ccaacaccga ggatacgaat cccggactca tcagacacac cgccgccacc
      301 gtataacgga taggccacaa catctgataa acggataccc tcccgccgct tctcattgcc
      361 gcacccgcca ataaaagacc ggacagcccc gtatgcctga gcatcagcac accggcggca
      421 aaggttgccg ccatcagaaa cagcgtccaa ccgccgccca gccaatcggc aacccacaca
      481 atcgacataa tctccaaaaa cagcagcacc aaaaaaccga taccgaaaaa tctcattgac
      541 cgtcatcctt atatttaagt aaacagcaaa ccgcccgaac aagactccaa gcgacctgcc
      601 tgtaaatgat tacaaaacca tgtgcttcaa gccgaaacaa tgtgaaatca cgcaatatag
      661 tggattaaca aaaaccagta cagcgttgcc tcgccttagc tcaaagagaa cgattctcta
      721 aggtgctgaa gcaccaagtg aatcggttcc gtactatttg tactgtctgc ggcttcgtcg
      781 ccttgtcctg atttttgtta atccactata attatttttt agcgtgtaaa acaaaaccgg
      841 ctgcatacct gcaaccggcc tcaaatcagc acaattcctt atccaaatcc gccaacagct
      901 ctttcagacc gtctccgatt tcctgaagcg taaccggacg gttgccgtcc gaacccgatt
      961 ccgcaccttc tgcatacggt gcaaacgtgc tctgcaattt caacagtttc accacatcca
     1021 aacgggtgta gcgttcgccg ccgtaaccga caaccacacc gtgatcatgc tgccattgcg
     1081 caaaaccata ggggctgatt tgcaacagtc cgcacaactc gtccagcgtg aaatagcgtt
     1141 ttgcgggaac cttcaaatca acgttgtttg tcatagtagt gttccaccat gcttttgagt
     1201 ttctggctgg catggaaagt taccacgcgg cgggcggtaa tcggcacttc ctcgccggtt
     1261 ttagggttac gacccgggcg ttgcggcttg tcgcgcaact ggaaatttcc gaaaccggaa
     1321 attttgattt cttcgccgct tgccaaagtg ctgcggattt cttcaaaaaa gagttcgacg
     1381 atttctttgg catcgttttt ggtgacgttg ctgactttgt ctaccaaaat atcggccagt
     1441 tctgctttag tgagagtcat atgattacct tctgttgtaa cagttgtgga ttattaccaa
     1501 tttttattta aaattcaagc gaatatttat tttttaactg cgaagccgcg cccctgccgc
     1561 cgttgccgcg ccaatcagtt ttccgataag cggctcgacc gcctcatccg tcagcgtgtt
     1621 ttccatatcc tgcaaaatca ctttgaccgc cacgctcttc atcccttcgg gcagtcccgt
     1681 gccgcgatac acgtcaaaca cgctgatttc ctgtaccaac ttgtttgccg cgcctttcaa
     1741 gacaagcagc aaatcatcat ggctcatagc ttccggcatc acaaacgcca aatcgcggcg
     1801 caccggctgg aatttcgata cggcccgata gcgcgttttc ccgcattcca acacggccgc
     1861 catatcgatt tcaaatacca gcggcgcttg cggcaggtcg tatttttgca gccatttcgg
     1921 atgcagttcg ccgacaaagc cgatgacttt gccgtctgaa acgatattgg cggcacgtcc
     1981 gggatgcagg gcgggatgtc cggttttaac gaactcgact gctttgtttt tcaacagatt
     2041 ttccacatct gccttaatgt cgtaaaaatc cgcattgcgc gttttcccac cccattgttc
     2101 gggcattgcc gcgccgtacc acagaccgcc gatgcgttcg ttttggacaa accggccgtc
     2161 tgaacctttg ccgaacacgc gggcgatttc aaacacgcgc acgcggtttt gtttgcggtt
     2221 caggttgttt tgcaaaattt ccaccaagcc gccgatgagt gtggaacgca tcacggcata
     2281 ttgcgccgcc agcgggtttt gcaggcggat ggggtcggcg ttggcggcaa aatcttgttc
     2341 ccactgctcg tcaacgaagg catagctgac cacttcgcgg tagccgtgcg ccgccatttc
     2401 gttgtaaacg gcaaaacgcg ggcggcgtgt ttcgggcagt tccagcattt tcagacggcc
     2461 tgacgtgtaa tcgtcgggga tgttttcata gccgtaaacg cgtccgattt cttcaatcaa
     2521 atcggcctca atttcgatgt caaaacggaa gctcggcgcg gtaacgcgga agccttccgc
     2581 cgttttctcg ggctgcaggc ccaagtgttg caaaatggtt tccacctgtt cggcaggaat
     2641 gtccacgccc aacacggttt tcagacggtc caaacgcagt ccgacctgct tggcttcggg
     2701 caatttacct tgtgcttcaa ccatctcgcc tgccgcaccg ccgcaaatct gcaacaccaa
     2761 ttcggtagca cgttccatgg catccgcctg caaacggtaa tccacgccgc gctcgaagcg
     2821 gaacgacgaa tccgaaccga aaccgtattg gcgcgatttg ccggcgatga tttcgggcgc
     2881 aaaccaagcc gcttccagca cgatattttg cgtgccgtct gaaaccgcgc tcgccgcgcc
     2941 gcccattaag cccgccaaac tcaacacgcc tttttcgtcc gccacgacca gcgtgttttc
     3001 agacagggaa acggttttct cgttcaggca ttccagcgtt tccccttcgc gcgcgcggcg
     3061 gatgtgcagg ctgccggaaa gtttgtcggc atcaaaaacg tgcatcggct gaccgatttc
     3121 cagcatcaca taattgccga tgtccaccag cgcggaaata ctgcggatgc cgctgcgctc
     3181 caaacgttgt ttcatccaat cgggagtagc cgctttcgca ttgacatttt caataacgcg
     3241 gctgataaaa cggccgcaat cggcaggcgc gttaatctgc acgggctgtt ttcgactgcc
     3301 cgtgatcggc gcggtatgga tttcgggctg cctgaacgcg caccccgtca atgcggacac
     3361 ttcgcgcgca atgcctttga tgctcaagca gtcggcgcgg ttaggcgtaa ttttcaacgt
     3421 aaacagcgta tcgtccaaat ccaagtattc gcggatattg gtaccgacgg gcgcatcttc
     3481 aggcagaatg tgcaggccgt ctacaccatc atcaggcaaa cctagttcat tggtcgaaca
     3541 cagcataccg tttgatggca caccgcgcat tttggtcggc ttgattttga aattacccgg
     3601 caaaacggca cccggcagcg aacacggcac tttgatgccc gctttcacat tcggcgcacc
     3661 gcacacaatc tgcaccaacc cgcccgtacc cgcatcaact cgggtaacgt tcaaacggtc
     3721 tgcatccgga tgtttttcaa cggatttcac ttcggcaatc accacgcccg caaacgcagg
     3781 cgcggcagtt tcagcctctt ccacttccaa gccggacatc gttaacagat gttccagctt
     3841 atcggaggaa agttcggtat cggcttgggt tttcagccat gagtaggaga attgcatggt
     3901 taatttctct atatttttaa gttattcaat aatacaataa cctggatgcc caaaactgat
     3961 tctagcttca ggtaaattat tttttatttt ctcaatcgat tgttggtaat aatcggaatt
     4021 gatttcacaa gctgtcaaat caaactgtgc aatgcagcat gcaatagcaa gagttccact
     4081 tcctaaatgt gtatctaaaa tcttatcacc ctgctttgca tacattttta acaaccactg
     4141 atataattcg actggttttt gtgttgggtg agttttatta cgatttttcc gcacactaaa
     4201 ccggaaaatt ttagatggcc tatcgaatga cgaccaagcc atttccgcca tagaaaaatt
     4261 atttaatgtc tctggttgat tcttatccca aataataaat cctttattat attcacttct
     4321 caaccataac tcgccaaaat aattcccacc ccaaataatt tgattttttg acacgcgaaa
     4381 taattcatta aagtaagttt ggtctggctt aatatcccat tgtgagtatt cattcatatt
     4441 gaatttataa tcaccaccac gtttagtttt attcaaaatc ccataaggag gatctacaat
     4501 tgccaaatca aaatacttgt caggataccg agacattaag atcatgttat cttcatttga
     4561 aatagttatc atgtactata cgcttccatt gtggtgttac ttgcaaactg ttgcatagtc
     4621 aaattggaaa tttctgaact aatatctttt ccaagatttt taataataat ttcatcaaaa
     4681 taccgataat caatctctgg aatactggag cgattaatca aacaattata taaaaattca
     4741 gcaaatgtat tggcacgaat aattacaatt gggcaattac gaatatcgga taatacggca
     4801 gggacataac gtggtgtgac aacaattgtg taaatggcct taattttatt tttatgatct
     4861 tccaatcttc ctgaattaat acctgataac ttatttttag ttgattttgc ctccactgca
     4921 aattttctct tttgcgtaat atataagcac tctaaatccg tattacctgg tccaccaatt
     4981 tttttagctt ctacgttata aaacatattg aaccccattt ctagaacatc ttcaaataga
     5041 tatgcctctg ttccattatt attatctgca tattgttcaa tcaacctagg taagtgcaat
     5101 aattcatatg ctgcttcatc cttaagctca ccaatttcct ccaataactc ttttggatag
     5161 aagctataaa tttccttaat gacatcaatt ttcaaacgat cactatcgtt cagatttaat
     5221 ggcatttctg aaaacgaata agcactttgc aattttttca caaattcctg aagttgctta
     5281 ggaatcgaaa actcacttga tgttacttta cgatatgttt cggtcttacc atgctttaga
     5341 cggcaaataa ttttaccatc tgttttttgc aaaacacctg catcagtcaa tgtttttgaa
     5401 aaataagatt cccactcatg tgctgcattt acataagcat gactacgact attttccgca
     5461 gttaattgat gtttaatttt tacttcagca catgttcgta acaccaaaat gtcttgtact
     5521 aatttttcat agctattctg atcagcagat ttcacaaatg aaattaaata gatatattca
     5581 taagaaaata gtttacaatc caatctttca tcagataaca acttaaatat tagtctcatg
     5641 ggatataatt gaatactttc atcagtctta atgtacggat gaggaaatgg tatcgcccac
     5701 aacatagtaa gaaaaatttt ttgaatatat tcattattat ccaagtgttt caaaaataaa
     5761 ttacccaatg gactgaacag gaatttctgt gtaacttgcc cacacacatc acgataacca
     5821 aacatataga atgataattc ttttatttta tgagtagtag catccaatga tttacctgta
     5881 tttcgtctat ggtataaatc tagtttttcc aatttttcag ataacttagc tttatcctct
     5941 acagatataa aagaatttgt tttcaaaata cctgcaaatt tacataaaat atgaaaattc
     6001 tgtaaatgtt tatctattac ccagcgcgca gttgtcatat ctattttcct attctctcta
     6061 caattttttt aattaacaat ggaggaatag attcaccaat acattgccga attaataatt
     6121 ctgatgtatc gtcgggaata ttccaatcaa taggtaatga tgttaaaagc attaactcta
     6181 atggtgttaa aactcttgca tctgaatatg ttccatcagg catagaccgt ccaggatgaa
     6241 catttaattg tgaactgata gcgtcattac gaatagtaat agttggggca ggagcatccc
     6301 actccatacg gcgataagtt gtattataac ttttaatttt ttcaccattt tttttctttg
     6361 gataatgttc tatattatca aaagcagatc gtcctgttgg cgtatttttt agccatataa
     6421 tgtgctccgg agcatgtgta cgtgcaaaat gccatttcac attagacttt tgtccagact
     6481 caatactagg caaaaaacta atagcatcac gaacagaaat ggtttttgta actttttccg
     6541 gcattcccca aatagttgaa tgtttattca tacgaataat agctcgttta cgatgttgtg
     6601 caacaccata atcggcagaa tcaaaaatat gagtttgaat ataatattcg caaccaaata
     6661 aatcttgcaa aattacttct actgtttgta atgtcccctt ataaggtaac ttaattttta
     6721 aaaaaaatgg aacattttca atcaaaacaa aagttgggcg ttttaataaa ataaattcga
     6781 ttactctgaa tattaaatga ttacgtttat cattagccat ctcttgaatg ttacgatttt
     6841 tccctgcaac actcatgcct tgacaaggag gagaagcaat taaaaaatct aatcgattcg
     6901 gcacgctctg tattaaattt tgaaacactt cctcatgaag tatatcacct ataatcattt
     6961 tactttcggg atatagagct ttatataaat tagcacgttc tggcaccaat tcatttgcag
     7021 ctataatctt aatacccgca ttatgcaagt aggtttctgc aatccctgca ctcgaaaaca
     7081 aagaagcccc tatcatcata gaaccaaacc caaattaact atataatctc tacaaagcaa
     7141 taaattatgc ctctttaaac aaaattagga atgtaatttc acaacaaaat atcaaatgtt
     7201 ttatatctta catttgaatt ttcctaagca gcctgaaaac caagagtagg ctgcttttcc
     7261 atattcaggc agcctacaca atcattttac aaactgcttc aaaaaattca aatcgttatc
     7321 aaaaaacaag cgcaaatcgt tcacgttgta acgcagcatc gcgaaacggt cgagaccgat
     7381 accgaaagcg aaaccggtgt atttttcaga atcgatattc acatttttca acacgttggg
     7441 atgcaccatg ccgcagccgc cgacttccag ccatttgccg ttttcgccca taatgtcgat
     7501 ttcggcagac ggttcggtga acgggaagaa agacgggcgg aaacgtactt gcaaatcatc
     7561 gcgttcaaag aagcgacgga taaaatccgt gaacactgct ttcaaatcgg caaaagttac
     7621 gccctcttct acccacaaac cttccgcctg atggaacata ggcgagtgcg tggcatcgct
     7681 gtccacacgg taaacgcggc cgggggcgat aatgcggatg ggcggctctt ttttatcgag
     7741 catatagcgg atttgaatcg gggaagtgtg cgtacgcaaa acatcaccgt tttcaacgta
     7801 aaacgtatcc tgcatcgcac gggcaggatg gtttgcaggg atgttcaggg cttggaaatt
     7861 gtgaaaatcg tcttcgattt caggcccgtc cgccacttcg aaacccattc cgtgaaagag
     7921 ttcgaccaca cgttgcaagg tcagggttac gggatgcagg ctgccgcctt cctgagcgcg
     7981 tccgggcagg gtaatgtcga gggcttcggc ggcaagtcgg gcttgcagct tggcttcgtt
     8041 gagggcatcg cgtttggcat taaaagccgt ctgaaaccgg tttttgcatt cattgatatg
     8101 cgcacctatg gttttgcgct cttcaggcga catttgcccc aaagttttca gaagtccggt
     8161 caactcgccg gttttgccaa gataacgggc tttgatttgt tctagagcgt tgaagtcttg
     8221 cgcagcttct actgcggcaa tgccttctgc aacgatgcgg tttacatttt ccataatatc
     8281 aagtctgtca attaatgata tgccacctga aacaacgagg ccgcctgtat agcctgacat
     8341 atcagactct tcagacgacc ttattttctt cacggtcaat ccattggata aattttctgt
     8401 atagtggatt aaatttaaac cagtacggcg ttgcctcgcc ttgccgtact atctgtactg
     8461 tctgcggctt cgtcgccttg tcctgattta aatttaatcc actatatttt aacgcaaatt
     8521 tatttaaaaa aatagacttt aaagaaagaa aatcaatcac atagaatttc tgcaaacaaa
     8581 gaaaaaagga agccgcagct tccttttcaa ttttttggat taagcagcca aagcagcttt
     8641 ggctttttca accaattgtg caaaagcggc tttatcgaac acggccaaat cagccaatac
     8701 tttgcggtcg atttcgatag aggcgcgttt cagaccattc ataaatttgc tgtaagacaa
     8761 cccgttttca cgcgcacctg cattgatacg gacaatccac aattgacgga attggcgttt
     8821 gcgttggcgg cggtcgcggt atgcgtattg gccggctttc attaccgcct gcttggcaac
     8881 gcggtaaacg tttttacgac ggccgcgata gcctttggct aacgcgaaga ttttttggtg
     8941 acgggcacga gcggtaacac cgcgttttac gcgtggcata ttctaaactc cttaagcgta
     9001 gggtaacatt ttagcaacag aagccaaatc gcgatcattt accatagagg taccgcgcag
     9061 ttggcgtttg tttttggtgg tctttttagt caagatgtgg cgtttgaacg catgagcgcg
     9121 tttcacaccg ccgttaccca gtactttaaa gcgttttttc gcgctagact tggttttcat
     9181 tttaggcatg ggaaaactcc attcgttatc ggataaggca ttagggggtt ttaaaacatc
     9241 ggtttcaaac acttgaaccc acaatgccac ggttttttgc cgcaattgaa aacttactcc
     9301 gaagcggcaa tcggagtaag cggagaatta tagctttatt ttttcttcgg cgcaatcatc
     9361 atcaccattt ggcgaccttc cattttggga aaggactcga tttgcgccac ttcagccaaa
     9421 tcttctttta cacgttccaa aagttgcgcg ccgagttgct ggtgagccat ttcacggccg
     9481 cgaaaacgca atgtcacttt gactttatcg ccgtcggcaa ggaagcggtt aatgttgcgc
     9541 atcttgattt gataatcgcc ctcatccgta cccggacgga atttgatttc cttgatttgc
     9601 acctgctttt ggtttttctt ggcttcgtcg cgcttcttgg cttgttggta tttgtattta
     9661 ccgtaatcca tcagtttgca cacaggcggt ttagcagttg gggaaatctc taccaaatcg
     9721 acatcctgcc cttcggccat agccaaagct tcacgaactg aaacgacacc aagctgttcg
     9781 cctgactcac tgattaaacg cacttctttg gcggtaattt cgccgttgat tcgtgcttcg
     9841 cgttcttgag cgatgatgaa tactcctata aaaattaatg attgacgagg gcatcagtga
     9901 tttcttgctg caattgcgca atgaaatcat ccaaatccaa agaacccaaa tcttctgctt
     9961 tgcggcgtac cgccactttg ttttcctgct tctccttatc gccgacaacg atttgataag
    10021 ggaaacggta ttggctgttg tcgcggattt tgtaaccgat tttttcgtta cgcaaatcca
    10081 actcggcgcg gaatcctgcc gcctgcaatt tggcagccac ttcacggcag taatccgctt
    10141 gattttcggt gatattcata atcaccattt gaaccggcgc caaccataac gggaatgagc
    10201 ctgcatggtt ctcaatcaga atgccgataa accgctccaa agaacccaaa atggcgcgat
    10261 gcaacataac aggacgcgca cggtcgttgt tttcagttac atattcggca ttcaaacgct
    10321 ccggcaatac gaaatccagt tgtaatgtac cgcattgcca agaacgaccc aaggcatctc
    10381 tgacatgata ttcgatttta ggcccgtaaa acgcaccctc gcccggcaat tcgccccatt
    10441 ccacgccgca ggcagtcaat gcctcgcgca aaccctgctc tgccttatcc cacacgtcat
    10501 ctgaacctgc gcgtttttca gggcgaagag aaagcttgac ggatacatca tggaaaccga
    10561 actgtttgta gatgcgaacc aacaattcat tgaacgcacg ggcctcgctg acgatttggt
    10621 cttcggtaca gaaaatatgc gcatcatcct gcacaaatcc acggacccgc atcagaccat
    10681 gcaatgcacc gcttggttca ttgcggtggc aagaaccgaa ctcggccaaa cgcatcggca
    10741 aatcgcgata tgagcgcaaa ccgttattaa aaatttgcac atgacccgga cagttcatcg
    10801 gtttcaccgc gtattcgcgt ttttctgaac tggtcacgaa catattgtct ttgtagttgt
    10861 cccaatggcc ggatttttcc caaaaggttt tatccataat ttgaggcgtt ttgacctctt
    10921 tataaccggc ggcgttcagc tctttacgca tatgctgttc aatcacttgc cacaaagccc
    10981 agcctttagg atgccaaaac accatgcccg gcgcttcgtc ttgcagatgg aacagatcca
    11041 attgcttgcc aagtttgcgg tggtcgcgct tttcggcttc ttcgatacgt tgaatatagg
    11101 cttttaattc gtcttttgtc gcccaagccg taccgtatat gcgttgcagc atttcattat
    11161 tgctgtcgcc gcgccagtat gcgcccgcca acttggtcag tttgaagttt ttcaggaaac
    11221 gggtattcgg aacgtgcggg ccgcggcaca tatcgacata ttcctgatga tgatacatcc
    11281 ccatcgcttc cacttcgggc atatcgtcaa tcaggcgcag tttgtattct tcgccgcgct
    11341 cttgaaaaat tttaatcgcc tccgcacgcg gagtcatgat tttgaccaca tcatagtctt
    11401 gggcaatcaa ttctttcata cgcgcttcaa tggcggcaac atcttccggt gtaaacggtt
    11461 tttccgtggc aatgtcgtaa taaaagccct cttcaatgac ggggccgata accatttttg
    11521 cattaggata gagttgcttg acggcatgcc cgacaagatg ggcgcaggaa tggcggatga
    11581 tttcgatgcc ttcctgatct ttcggagtaa tgatttgaac agcagaatct tcaacaatcg
    11641 ggtcgcacgc atcgaccaat ttgccgttta ccctgcctgc caccgccgcc ttcgccaaac
    11701 cggcaccgat agacgcagca atttgagcca cggtaacggg ggattcgtat tgtcggactg
    11761 agccgtccgg caaggtaatg ttcaacatca aaaagctcca aaacattaaa aaataacggc
    11821 ataaatgccg ttatgggaat ttggtaggca cgattggatt cgaaccaacg acccccacca
    11881 tgtcaaggtg gtgctctaac caactgagct acgtgccttc aaagaatttt tgcattttat
    11941 cgggtcgttt taatttttgc aagaggtatg tgcgtttctt tatgcaacat tgcggcaaga
    12001 tttggggatg tcgtctgaaa aaccgtggga aatcatttat aatgccgtct tttaaaacat
    12061 atttcgcccc ctgtcgccca actgacattc aatcttatgc ttaaatttac cttacacaaa
    12121 aaagacggat acgcccgacg cggcacgctg gagttgaacc acggcaaaat cgaaacgccg
    12181 gtatttatgc ctgtcggtac ttacggttcg gttaaggcga tgaacccgca aaacctgcac
    12241 gacatcaagg cgcaaattat tttgggcaac acttatcatt tgtggctgcg tccgggcttg
    12301 gaggtcgtcg aacagtttgg agggcttcac ggctttatcg gctgggacaa accgattttg
    12361 accgactcgg gcggttttca ggttttttct ttgtcggata tgcgcaagct gacggaagaa
    12421 ggctgtacgt ttaaaagccc gattaacggc gacaagctgt ttttatcgcc tgaaatttct
    12481 atgaaaatcc aaacggtttt gaactcggac atcgcgatgc agttggacga atgcacgccg
    12541 ggcgaggcga cgcgcgaaca ggcgcgaaaa tcgttgcaaa tgagcctgcg ctgggcggaa
    12601 cggagcaaaa aagcctttga agatttgaaa aacccgaacg cactgttcgg catcgtgcaa
    12661 ggcgcgatgt atgaagattt gcgcgaagag tcgctgaaag gcttggaaga gctcgatttc
    12721 cccggcttgg ccatcggcgg cttgtccgtt ggcgaaccta agcccgaaat gtaccgcatg
    12781 ttgcgcgccg tcggccctat cctgccggaa cacaaacctc attatttaat gggcgtcggt
    12841 acgcctgaag acttagtgta cggcgtggca cacggcgtgg atatgttcga ctgcgtcatg
    12901 cctactcgca atgcgcgtaa cggctggctg tttacccgtt ttggcgattt gaagatcaaa
    12961 aacgccaaac acaagctcga caagcgtccg atagacgaaa gctgcacctg ctacgcctgc
    13021 caaaacttca gccgcgccta cctgcaccat ctgcaccgcg ccggcgaaat cttgggcgca
    13081 cagctcaaca ccatccacaa cctgcatttc taccaagtca ttatggcgga aatgcgcgat
    13141 gccatagaac aaggcaaatt tgccgactgg caggcgcgat tccacgaaaa ccgtgctcgc
    13201 ggcacagact gactcccggc aatgccgtct gaagccgctt cagacggcat tttgccgctt
    13261 taccctaccc gcactatttt tcagaaaccg atcatgcttc cattccttcc agaaccctcc
    13321 ctttcctata cgcaacaaaa ccgtaccgcc gttttgctgt tgaacctcgg cacgcccgac
    13381 gcgccgaccg cgcaggcggt acgaccttat ctgaagtcct ttctgaccga ccggcgcgtc
    13441 gtcgaactgc ccaaatggct gtggtatccc attctgcatg gtctggtact gacgttgcgc
    13501 cccaaaaaaa gcgcgcacgc ctatgaaaaa atctggttta aggaaggttc gcccctagaa
    13561 gtttacacag cacgccaagc tgccgcgctt gccgaacgta tgcccgacct catcgtccgc
    13621 cacgccatga cctacggcaa tccttcggtg gcagacgtat tgtcggaact gaaggcgcaa
    13681 ggcgcgggca gactgctggt catcccgatg tacccgcaat atgccgcttc cagcagcgga
    13741 gcggcagtag ataaggtgtg cgaacaatta ctgctgcaac ggaaccaaat gagcgtccgc
    13801 accgtttcgc gcttttatga cgataccggc tacattgatg cgatgaaaaa ccacatcctc
    13861 cgatattggg cggaacacgg acgtgggaaa aaactgatgt tgagttttca cggcgtaccg
    13921 cagaagcact acgacctcgg cgacccctat cccgacgagt gccgccacac cgccaaactg
    13981 cttgccgaag cactggaact gaccgaagac caatatgtcg tatcgttcca aagccaattc
    14041 ggcagggcaa aatgggttac accgagcacg caggatttgt tcggcaaact gcccaaacag
    14101 ggggtaaccg agctggacgt attctgcccg ggctttttgg cagactgttt ggaaaccatg
    14161 gaagaaatcg ccctgatggg gcgggaacag ttttacgaag caggcggcaa aagctaccgc
    14221 tacatcccct gcctcaacga caaccccgac tggatagacg cactcgtcgc acttgccgaa
    14281 gaaaaccttg gcggctggcg ttgaaactgt ttgacccatg tctaaaatgc cgtctgaacg
    14341 ccgtgttcag acggcatttt cccgctactt tagcgtatga tggcatctat gccggacaac
    14401 aacatcaagt gcaaccttac taccgattcg gcaaaaaaat ctttcacccg ctacgcaaaa
    14461 tcaacaacaa ggtttcaaac attaaggaaa caccaatgaa cacaacccga ctgccgaccg
    14521 ccctcgtctt gggctgcctc tgcgccgccg cttctgccgc cgacaacagc atcatgacaa
    14581 aagggcaaaa agtgtacgaa tccaactgcg tcgcctgcca cggcaaaaag ggcgaaggcc
    14641 gcggaaccat gtttccgccg ctctaccgct ccgacttcat catgaaaaaa ccgcaggtgc
    14701 tgctgcacag catggtcaaa ggcatcaacg gtacaatcaa agtcaacggc aaaacctaca
    14761 acggattcat gcccgcaacc gccatcagcg atgcggacat tgccgccgtc gccacttata
    14821 tcatgaacgc ctttgacaac ggcggcggaa gcgttaccga aaaagacgta aaacaggcaa
    14881 aaggcaaaaa aaactaaaca gacaaaatgc cgtctgaaac cggcaatccg gcttcagacg
    14941 gcattcaaat caaacctttc taacgcggta ctttcagccc catagacccg atattgccgc
    15001 caccgtcaac ctccttcgcg gtcagcataa agccgccgat gtcaatacgg ccgcactcga
    15061 ccggctcctg actgtcggaa cgcttatcga aaagctcggc aaggctcaaa ccctcttcgc
    15121 ccgcttccag cctcaaaccg taagcaagtg ccaaatcacc cgaacgtgct gccggcgaaa
    15181 cgacaaactc gccgaaaaaa tcaaaatgct cacggacacc gatacccgtc tcggtaaagt
    15241 atttcgccat tttatagtga a
//
LOCUS       DBBZXU010000042        15060 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.042, whole genome shotgun sequence.
ACCESSION   DBBZXU010000042 DBBZXU010000000
VERSION     DBBZXU010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 15060)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15060)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15060
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.042"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(122..1447)
                     /locus_tag="ACJJDE_001121"
     CDS             complement(122..1447)
                     /locus_tag="ACJJDE_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HGG7541060.1"
                     /translation="MKKYLFRAALYGIAAAILAACQSKSIQTFPQPDTSVINGPDRPV
                     GIPDPAGTTVGGGGAVYTVVPHLSLPHWAAQDFAKSLQSFRLGCANLKNRQGWQDVCA
                     QAFQTPVHSFQAKQFFERYFTPWQVAGNGSLAGTVTGYYEPVLKGDDRRTAQARFPIY
                     GIPDDFISVPLPAGLRSGKALVRIRQTGKNSGTIDNTGGTHTADLSRFPITARTTAIK
                     GRFEGSRFLPYHTRNQINGGALDGKAPILGYAEDPVELFFMHIQGSGRLKTPSGKYIR
                     IGYADKNEHPYVSIGRYMADKGYLKLGQTSMQGIKSYMRQNPQRLAEVLGQNPSYIFF
                     RELAGSSNDGPVGALGTPLMGEYAGAVDRHYITLGAPLFVATAHPVTRKALNRLIMAQ
                     DTGSAIKGAVRVDYFWGYGDEAGELAGKQKTTGYVWQLLPNGMKPEYRP"
     gene            1658..2497
                     /gene="efeU"
                     /locus_tag="ACJJDE_001122"
     CDS             1658..2497
                     /gene="efeU"
                     /locus_tag="ACJJDE_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter permease EfeU"
                     /protein_id="HGG7541061.1"
                     /translation="MLVAFLIMLREGIEAALIVGIVAGFLKQSGHSKLMPKVWFGVVL
                     ASLMCLGLGYGIHSATGEIPQKQQEFVVGIIGLVAVAMLTYMILWMKKAARSMKRQLQ
                     DSVQAALNRGSGQGWALVGMAFLAVAREGLESVFFLLAVFKQSPTWQMPAGAVAGVLA
                     AAVIGALIYQGGMRLNLAKFFRWTGAFLIAVAAGLLAGSLRALHEAGIWNALQDIVFD
                     SSKYLHEDSPLGVLLGGFFGYTDHPTQGEALVWLLYLIPVITWFLCGSRPSETLTRKE
                     ELK"
     gene            2494..3660
                     /gene="efeO"
                     /locus_tag="ACJJDE_001123"
     CDS             2494..3660
                     /gene="efeO"
                     /locus_tag="ACJJDE_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HGG7541062.1"
                     /translation="MRKFNLTALSVMLALGLTACQPPEAEKAAPAASGETQSANEGGS
                     VSIAVNDNACEPMELTVPSGQVVFNIKNNSGRKLEWEILKGVMVVDERENIAPGLSDK
                     MTVTLLPGEYEMTCGLLTNPRGKLVVTDSGFKDTANEADLEKLSQPLADYKAYVQGEV
                     KELVAKTKTFTEAVKAGDIEKAKSLFADTRVHYERIEPIAELFSELDPVIDAREDDFK
                     DGAKDAGFTGFHRIEYALWVEKDVSGVKEIAAKLMTDVEALQKEIDALAFPPGKVVGG
                     ASELIEEVAGSKISGEEDRYSHTDLSDFQANVDGSKKIVDLFRPLIETKNKALLEKTD
                     TNFKQVNEILAKYRTKDGFETYDKLGEADRKALQASINALAEDLAQLRGILGLK"
     gene            3929..5194
                     /gene="efeB"
                     /locus_tag="ACJJDE_001124"
     CDS             3929..5194
                     /gene="efeB"
                     /locus_tag="ACJJDE_001124"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0033212 - iron import into cell [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake transporter
                     deferrochelatase/peroxidase subunit"
                     /protein_id="HGG7541063.1"
                     /translation="MSKNQPAQPTRRTLFKTAIAAGAVGAIGGYLGGKKQGETAERTA
                     ESQHSPQAYPCYGEHQAGIVTPQQAFSIMCAFDVTAQSAKQLENLFRTLTARIEFLTQ
                     GGEYQDGDDKLPPAGSGILGKAFNPDGLTVTVGVGSSLFDGRFGLKDKKPIHLQEMRD
                     FSNDKLQKSWCDGDLSLQICAFTPETCQAALRDIIKHTVQTAVIRWSIDGWQPKSEPG
                     AMAARNLLGFRDGTGNPKVSDPKTADEVLWTGVAANSLDEPEWAKNGSYQAVRLIRHF
                     VEFWDRTPLQEQTDIFGRRKYSGAPMDGKKEADQPDFAKDPEGDITPKDSHIRLANPR
                     DPEFLKKHRLFRRAYSYSRGLASSGQLDVGLVFVCYQANLADGFIFVQNLLNGEPLEE
                     YISPFGGGYFFVLPGVEKGGFLGQGLLGV"
     gene            complement(5263..5595)
                     /locus_tag="ACJJDE_001125"
     CDS             complement(5263..5595)
                     /locus_tag="ACJJDE_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein YjdM"
                     /protein_id="HGG7541064.1"
                     /translation="MSLPPCPQCASEYTYEDGGQYICPECAHEWNKTESAAAEAAEEV
                     RDANGAVLQNGDTIILIKDLKVKGSSMTIKQGTKVKGIRLQEGDHNIACKIDGSAMNL
                     KSEFVKKA"
     gene            complement(5670..7040)
                     /gene="glmU"
                     /locus_tag="ACJJDE_001126"
     CDS             complement(5670..7040)
                     /gene="glmU"
                     /locus_tag="ACJJDE_001126"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HGG7541065.1"
                     /translation="MPQNTLNIVILAAGKGTRMYSKMPKVLHEIGGETMLGRVIGTAA
                     ALNPQNICVVVGHGKEQVLDTVKRDVVWVEQTEQLGTGHAVKTALPHLAAEGRTLVLY
                     GDVPLIDVETLETLLEAAGNEVGLLTDVPADPSGLGRIIRDGSGSVTAIVEEKDADTA
                     QKAVKETNTGILVLPNAKLENWLNSLSSNNAQGEYYLTDLIAKAVADGIKVHPVQVRA
                     SHLAAGVNNKRQLAELERIFQTGQAQELLKAGVTLHDPARFDLRGRLKHGQDVVIDVN
                     CIFEGEVEIGDNVEIGANCVIKNAKIGANSKIAPFSHLEDCEVGENNRIGPYARLRPQ
                     ARLADDVHVGNFVEIKNAAIGKGTKANHLTYIGDAEVGSKTNFGAGTIIANYDGVHKH
                     KTVIGDEVRIGSNCVLVAPVTLGNKVTTGAGSTITRNVEDNKLALARARQTVIEGWVR
                     PEKDKQ"
     gene            complement(7095..7367)
                     /locus_tag="ACJJDE_001127"
     CDS             complement(7095..7367)
                     /locus_tag="ACJJDE_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spore cortex protein"
                     /protein_id="HGG7541066.1"
                     /translation="MRKTFLILMTTAALLSGCAWETYQDGNGKTAVRQKYPAGTPVYY
                     QDGSYSKNMNYNQYRPERHAVLPNQTGNNADEEHRQHWQKPKFQNR"
     gene            complement(7393..8073)
                     /locus_tag="ACJJDE_001128"
     CDS             complement(7393..8073)
                     /locus_tag="ACJJDE_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HGG7541067.1"
                     /translation="MQENPTVWLFDLDNTLHDADAGIFTLINRAMTRYMARRLKLSES
                     AASDLRQEYWHRYGATLAGLQIHHPEIDIAEFLRESHPIDAILTKLHGMADTEHTLCR
                     LNGRKAVFSNGPSFYVRAVVGALGLENRFDALFGTDDFGLLYKPNPQAYLNVCRLLDV
                     PPECCIMVDDSADNLHQAKALGMKTVWFGAKSHALSFIDACARDMAQLARYAETLSEH
                     RQTHYNTL"
     gene            8132..9133
                     /locus_tag="ACJJDE_001129"
     CDS             8132..9133
                     /locus_tag="ACJJDE_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7541068.1"
                     /translation="MKRKIWLLPLLAVSAYLQAQTEVRLAVHKSFSLPKGLIARFERA
                     NDAKVSIIQAGGANEMLNKLILSRANPIADAVYGLDNANIGKAREMGILAAAQPGSAP
                     VAVGLPSALAVDYGYVSINYDKKWFEGKKLPLPQTLQDLTRPEYKNLLVVPSPATSSP
                     GLGFLMANISGLGEEGAFKWWAQMRQNGVKVAKGWSEAYYTDFSHNGGAYPLVVGYAA
                     SPAAEVYFSKGKYSEPPTGNLFLKGGVFRQVEGAAVLKGAKQPELAAKLVQWLQSREV
                     QQAVPSEMWVYPAVKNTRLPDVFRFAQAPTHTTAPAQRDIDANQRGWVSRWIRTVLK"
     gene            9227..10075
                     /locus_tag="ACJJDE_001130"
     CDS             9227..10075
                     /locus_tag="ACJJDE_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HGG7541069.1"
                     /translation="MDFKQFDFLHLISVSGWEHLAEKAWAFGLNLAAALLIFLVGKWA
                     AKRIVAVMRAAMTRAQVDATLISFLCNVANIGLLILVIIAALGRLGVSTTSVTALIGG
                     AGLAVALSLKDQLSNFAAGALIILFRPFKVGDFIRVGGFEGYVREIKMVQTSLRTTDN
                     EEVVLPNSVVMGNSIVNRSTLPLCRAQVIVGVDYNCDLKVAKEAVLKAAVEHPLSVQN
                     EERQAAAYITALGDNAIEITLWAWANEADRWTLQCDLNEQVVENLRKVNINIPFPQRD
                     IHIINS"
     gene            10101..10586
                     /locus_tag="ACJJDE_001131"
     CDS             10101..10586
                     /locus_tag="ACJJDE_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
                     /protein_id="HGG7541070.1"
                     /translation="MDALHTIARNLTKKRQTVSCAESCTGGLLAAVFTSVAGSSQWFD
                     QSFVTYSNKAKEDRLGVLPETLLEHGAVSRQTVYEMARGAKAVAQADYAVGISGIAGP
                     GGGSESKPVGTVWFGFAFPGGSCEAMRRFDGNRESVRAQAVAFALERLAGLIENGGDA
                     V"
     gene            complement(10688..12256)
                     /gene="msrAB"
                     /locus_tag="ACJJDE_001132"
     CDS             complement(10688..12256)
                     /gene="msrAB"
                     /locus_tag="ACJJDE_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional peptide-methionine (S)-S-oxide
                     reductase MsrA/peptide-methionine (R)-S-oxide reductase
                     MsrB"
                     /protein_id="HGG7541071.1"
                     /translation="MKHRTFFSLCAKFGCLLALGACSPKIVDAGAATVPHTLSTLKTA
                     DNRPASVYLKKDKPTLIKFWASWCPLCLSELGQTEKWAQDAKFSSANLITVASPGFLH
                     EKKDGDFQKWYAGLNYPKLPVVTDNGGTIAQSLNISVYPSWALIGKDGDVQRIVKGSI
                     NEAQALALIRDPNADLGSLKHSFYKPDTQKKDSKIMNTRTIYLAGGCFWGLEAYFQRI
                     DGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFFRVVDP
                     TSLNKQGNDTGTQYRSGVYYTDPAEKAVIAAALKREQQKYQLPLVVENEPLKNFYDAE
                     EYHQDYLIKNPNGYCHIDIRKADEPLPGKTKTAPQGKGFDAATYKKPSDAELKRTLTE
                     EQYQVTQNSATEYAFSHEYDHLFKPGIYVDVVSGEPLFSSADKYDSGCGWPSFTRPID
                     AKSVTEHDDFSYNMRRTEVRSHAADSHLGHVFPDGPRDKGGLRYCINGASLKFIPLEQ
                     MDAAGYGALKSKVK"
     gene            12402..13667
                     /gene="ftsY"
                     /locus_tag="ACJJDE_001133"
     CDS             12402..13667
                     /gene="ftsY"
                     /locus_tag="ACJJDE_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0006614 - SRP-dependent cotranslational
                     protein targeting to membrane [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HGG7541072.1"
                     /translation="MFSFFRRKKKQETPAPEEAQVQETAAKAESEVTQIVENIKEEVE
                     SLTESVKGQVESAVETVSGAVEQVKETVAEMLSEAEEAAEKAAEQVEAAKEAVAETVG
                     EAVGQVQEAVATTEEHKLGWAARLKQGLTKSRDKMAKSLAGVFGGGQIDEDLYEELET
                     VLITSDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPET
                     KEPFVIMLAGINGAGKTTSIGKLAKYFQAQGKSVLLAAGDTFRAAAREQLQAWGERNN
                     VTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEIKKVKRVLQKA
                     MPDAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRP
                     VPVRYIGVGEGIDDLRPFDARAFVDALLD"
     gene            13912..>15060
                     /gene="pilC"
                     /locus_tag="ACJJDE_001134"
     CDS             13912..>15060
                     /gene="pilC"
                     /locus_tag="ACJJDE_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7541073.1"
                     /translation="MNKTWKRQVFRHTALYTAILMFSHTGGGGAQAQTQTQTHKYAIV
                     MNGQKLPEVKWGTGYRNLAQKSNERQFTHTSGFGIKKNVTLSFNNTDEVVAQKNGTVV
                     FGAATYLPPYGKVSGFDTAKLTERGKAVDWIRTTHPGLIGYSYENVTCSNNYYNASSG
                     CPELSYKTQFTFGNQGLKRKTNGRLDIDEDKSRDGSPIYKLQNYPWLGVSFNLSSESL
                     VKSIKYNKIISSFSEDVTQSNGTNSQYKDKNLVYTTGDYQYKNKYSSRYVGQDEHSAV
                     AFYLNAKLHLLDKKQIQNIAQVSELNFGTLRTLIEPTEEWKKKRTNFFQGGNWTFEDK
                     GEVSVKLKLPEVKAGRCVNKNNPNPNAKAPSPALTAPALWFGPVQNGKV"
BASE COUNT         3325 a         3839 c         4455 g         3441 t
ORIGIN      
        1 aatttgatcc actataattc cgtcaaataa gaaaggaatt ttgtgcctgc ggtatcgcaa
       61 aacttcgcct taatgcgccc gattgcctag ggatgggctt cagatggcat tgttttccgg
      121 tttacgggcg gtattcgggc ttcataccgt tgggtaggag ctgccagaca tatcccgtgg
      181 ttttctgttt gccggcaagt tcgccggctt cgtcgccgta tccccaaaaa taatccacgc
      241 gcaccgcgcc tttaatcgcg ctgccggtat cctgcgccat aatcaggcgg ttgagggctt
      301 tgcgggtaac cggatgggcg gtggcgacaa ataagggcgc acccaaggta atgtagtgcc
      361 ggtcgactgc gccggcatat tcccccatca gcggcgtgcc cagtgcgccg acagggccgt
      421 cattgctgct tccggcaagc tcgcggaaaa agatatagct ggggttttga cccaaaactt
      481 cggcgaggcg ttgcggattt tgccgcatat aagacttaat gccctgcatg gaggtttgtc
      541 cgagtttgag gtagccctta tccgccatat agcgtccgat ggaaacgtag ggatgttcgt
      601 ttttgtcggc atagccgatg cggatgtatt tgccggacgg ggttttcaga cggcccgagc
      661 cttggatgtg cataaaaaaa agttcgacag ggtcttcggc gtaaccgagt atcggggctt
      721 tgccgtcaag cgcgccgccg ttgatttggt tgcgcgtgtg gtaggggagg aagcggcttc
      781 cttcaaacct gcctttgatt gctgttgtgc gcgcggtgat ggggaatcgg gagaggtcgg
      841 cggtatgtgt gccgccggta ttgtcgattg tgccgctgtt ttttcccgtc tgcctgatgc
      901 ggacaagggc ttttccgctc cgcaaaccgg caggcagggg gacggagata aaatcgtcgg
      961 gaataccgta aatcgggaag cgggcttgtg ccgtccgcct gtcgtcgccc ttcagcaccg
     1021 gttcgtaata gccggtaacc gtaccggcaa ggcttccgtt gcctgcaacc tgccacggcg
     1081 tgaaatagcg ttcaaaaaac tgttttgcct gaaaggaatg gacgggggtt tgaaaggctt
     1141 gggcgcacac atcctgccag ccttggcggt ttttcaaatt ggcgcagccg aggcggaagg
     1201 attgcaggct tttggcgaaa tcctgcgccg cccagtgggg cagggacagg tgcggtacaa
     1261 cggtatagac ggccccgccg ccgccgaccg tcgttccggc ggggtcgggg atgccgaccg
     1321 gccggtccgg gccgttgatg acggatgtgt cgggttgcgg aaaggtttgg atgctcttgc
     1381 tttggcaggc ggcgaggatg gcggcggcga tgccgtacag ggcggcgcgg aataggtatt
     1441 ttttcataat ggacaatgtt gccggcagta ataagaaaga tggtttcggg cggcgttgcg
     1501 gcagccgtgg agaggggatt ttaacacagg gcgcagctgc agcctgcgga actttccgcc
     1561 gcgcggtact gcagataaaa ataacttgca tttgtattta caagcaatga aaatattccg
     1621 ataatatatt attcatcatc cttgttcgtt cgcgtttatg ctggtcgctt ttttaattat
     1681 gttgcgcgag ggtattgaag ccgcgctcat tgtcggcatc gttgccggtt ttctgaaaca
     1741 gtccggacat tccaaactga tgcctaaggt ctggttcggg gtcgtccttg cttctttgat
     1801 gtgtttgggg ctggggtacg gcatccattc ggcaacgggc gagattcccc agaagcagca
     1861 ggagttcgtc gtcggcatta tcggtttggt tgccgttgcc atgctgactt atatgatttt
     1921 atggatgaaa aaggcggcgc gttcgatgaa gcggcagctt caggattctg tgcaggcggc
     1981 tttgaaccgt ggcagcggtc aaggatgggc cttggtcggt atggcgtttc ttgccgtggc
     2041 gcgcgaaggt ctggagagtg tttttttcct gcttgccgta ttcaaacaga gcccgacgtg
     2101 gcagatgccg gccggcgcgg tagcgggggt tttggctgcc gccgtgattg gcgcgttgat
     2161 ttatcagggc gggatgcgcc tgaatctggc gaagtttttt cgttggacgg gggcgttttt
     2221 gattgccgtt gccgccggcc tgcttgccgg ctcgctgcgc gcgctgcatg aggcaggtat
     2281 ttggaacgcg cttcaggata ttgtgttcga ctcatcaaaa tatttgcacg aagacagccc
     2341 gttgggcgtg ctgctcggcg gatttttcgg ctataccgac catccgacgc agggcgaggc
     2401 cttggtttgg ctgctgtacc ttattcccgt cataacttgg tttttgtgcg gcagcaggcc
     2461 gtctgaaact ttaacccgta aagaggagct gaaatgagaa aattcaattt gaccgcattg
     2521 tccgtgatgc ttgccttagg tttgaccgcg tgccagccgc cggaggcgga gaaagctgcg
     2581 ccggccgcgt ccggtgagac ccaatccgcc aacgagggcg gttcggtcag tatcgccgtc
     2641 aacgacaatg cctgcgaacc gatggaactg accgtgccga gcggacaggt tgtgttcaat
     2701 attaaaaaca acagcggccg caagctcgaa tgggaaatcc tgaaaggcgt gatggtggtg
     2761 gacgagcgcg aaaacatcgc ccccggactt tccgataaaa tgaccgtcac cctgttgccg
     2821 ggcgaatacg aaatgacttg cggtcttttg accaatccgc gcggcaagct ggtggtaacc
     2881 gacagcggct ttaaagacac cgccaacgaa gcggatttgg aaaaactgtc ccaaccgctc
     2941 gccgactata aagcctacgt tcaaggcgag gttaaagagc tggtggcgaa aaccaaaact
     3001 tttaccgaag ccgtcaaagc aggcgacatt gaaaaggcga aatccctgtt tgccgacacc
     3061 cgcgtccatt acgaacgcat cgaaccgatt gccgagcttt tcagcgaact cgaccccgtc
     3121 atcgatgcgc gtgaagacga cttcaaagac ggcgcgaaag atgccggatt taccggcttt
     3181 caccgtatcg aatacgccct ttgggtggaa aaagacgtgt ccggcgtgaa ggaaattgca
     3241 gcgaaactga tgaccgatgt cgaagccctg caaaaagaaa tcgacgcatt ggcgtttcct
     3301 ccgggcaagg tggtcggcgg cgcgtccgaa ctgattgaag aagtggcggg cagtaaaatc
     3361 agcggcgaag aagaccggta cagccacacc gatttgagcg acttccaagc caatgtggac
     3421 ggatctaaaa aaatcgtcga tttgttccgt ccgttgatcg agaccaaaaa caaagccttg
     3481 ttggaaaaaa ccgataccaa cttcaaacag gtcaacgaaa ttctggcgaa ataccggact
     3541 aaagacggtt ttgaaaccta cgacaagctg ggcgaagccg accgcaaagc gttacaggcc
     3601 tctattaacg cgcttgccga agaccttgcc caacttcgcg gcatactcgg cttgaaataa
     3661 gccgcaagcg ttcagacggt atttggcggc agataccgtc tgaagtttta tagtggatta
     3721 acaaaaacca gtacggcatt gcctcgcctt gccttgcctt gccgtactat ttatactgtc
     3781 tgcggcttcg tcgccttgtc ctgatttttg ttaatccact atatccgcca tatattgcag
     3841 ggcgggattt caacctgccg ctatcggtta atggaaaaac ggcgtgcagg gatacccatc
     3901 ctgctgcacg gatattgaag gaaacaccat gagcaaaaac caacccgcac aaccgaccag
     3961 gcgcactctt tttaaaaccg cgatcgcagc cggagcagtc ggcgcaatcg gaggttatct
     4021 cggcggcaaa aaacagggcg aaaccgccga acgcaccgcc gaaagccaac actcgcccca
     4081 agcctatccc tgctacggcg aacatcaggc aggcatcgtt acgccgcagc aggcgttttc
     4141 gattatgtgc gccttcgacg taaccgcgca aagtgccaag cagctggaaa acctgttccg
     4201 cacgctgacc gcccgcatcg agtttctcac ccaaggcggc gaataccaag acggcgacga
     4261 caaacttccg ccagccggca gcggcatttt gggcaaagcc ttcaaccccg acgggttgac
     4321 cgttaccgta ggggtgggca gcagcctgtt tgacggtcgg ttcggactca aagacaaaaa
     4381 accgattcat ttgcaggaaa tgcgcgactt ctccaacgat aagctgcaaa aaagctggtg
     4441 cgacggcgat ttgagcctgc aaatctgtgc cttcaccccc gaaacctgcc aagccgccct
     4501 gcgcgacatc atcaaacaca ccgtccaaac cgccgttatc cgttggagta tcgacgggtg
     4561 gcagcccaaa tccgaacccg gcgcgatggc ggcgcgcaac ctgttgggct tcagggacgg
     4621 cacgggcaac cccaaagttt ccgaccccaa aactgccgac gaggttttgt ggacgggggt
     4681 ggccgccaac agcctcgacg aaccggagtg ggcgaaaaac ggcagctatc aggcagtccg
     4741 ccttatccgc cactttgtcg agttttggga caggacgccg cttcaagagc aaaccgacat
     4801 tttcgggcgg cgcaaataca gcggtgcgcc gatggacggc aaaaaagaag ccgaccaacc
     4861 ggattttgcc aaagaccccg agggtgatat cacgcccaaa gacagccata tacgcctggc
     4921 gaatccgcgc gatcccgaat tcctcaaaaa acaccgcctc ttccgccgcg cctacagcta
     4981 ttcgcgcgga ctcgcctcaa gcggacagct tgatgtcggg ctggtgttcg tctgctatca
     5041 ggcaaacctt gccgacggat tcatcttcgt gcaaaacctc ctcaacggcg aaccgctgga
     5101 agaatacatc agccccttcg gcggcggcta tttcttcgtc ttgcccggcg tggaaaaagg
     5161 cggctttttg gggcaagggc tgctgggcgt ataaatccgc catataaaaa acgccgtctg
     5221 aatccgataa ggggttcaga cggcatttta ctgtttgggc ggtcaggctt ttttgacgaa
     5281 ttcagatttt aaattcatcg cgctgccgtc gattttgcag gcgatgttgt gatcgccttc
     5341 ctgcaggcgt atgcctttga ctttcgtacc ttgtttgatc gtcatcgagc tgccttttac
     5401 cttgaggtct ttgatgagga tgatggtgtc gccgttttgc agcaccgcgc cgttggcatc
     5461 gcgcacttct tcggcggctt cggctgcggc ggattcggtt ttattccatt cgtgggcgca
     5521 ttcggggcag atgtattgtc cgccgtcttc gtaggtgtat tcggaggcgc attgcgggca
     5581 agggggtaat gacatggttt gccgtcctta tcggatgttt gttttggggt gccgtctgaa
     5641 acctgaaacc ggcttcagac ggcatagctt tattgtttgt ctttttcagg acgcacccag
     5701 ccttcgatga cggtttggcg ggcgcgggcg agggcgagtt tgttgtcttc gacattgcgg
     5761 gtaatcgtgc tgcccgcgcc tgtggttact ttgttgccga gggtaacggg ggcgactagg
     5821 acgcagtttg aaccgatgcg cacttcgtcg ccgatgacgg ttttgtgttt gtgcacgccg
     5881 tcgtagttgg caataatcgt accggcgccg aagttggttt tgctgccgac ttcggcatcg
     5941 ccgatgtagg taaggtggtt ggctttggtg cctttgccga tggcggcgtt tttgatttcg
     6001 acgaagttgc cgacgtgtac gtcgtctgca aggcgggctt gcggacgcag gcgggcgtac
     6061 gggccgattc ggttgttttc gccgacttcg cagtcttcga ggtgggagaa gggggcgatt
     6121 ttgctgtttg caccgatttt ggcgtttttg atgacgcagt ttgcgccgat ttcgacgttg
     6181 tcgccgattt cgacttcgcc ttcaaagata cagttcacat caattacgac atcctgtccg
     6241 tgtttcagac ggcctcgtaa atcgaaacgt gccgggtcgt gcagggtaac gcctgctttg
     6301 agcaattctt gcgcctgtcc ggtttggaag atgcgttcga gttcggcgag ctggcgtttg
     6361 ttgttcacgc cggcggcgag gtgggaggcg cggacttgga cgggatgaac tttaataccg
     6421 tcggcaacgg ctttggcgat gaggtcggtc aggtagtatt cgccttgggc attgttgctg
     6481 gaaaggctgt tcagccagtt ttccagtttg gcgttgggca ggacgaggat gccggtgttg
     6541 gtttctttca cggctttttg ggcggtatcg gcgtcttttt cttcgacaat ggcggttacg
     6601 ctgccgctgc cgtcgcggat gatgcgcccc aaacctgacg ggtcggcggg cacgtcggtc
     6661 aacagcccga cttcgttgcc tgcggcttcg agcagggttt cgagggtttc aacgtcaatt
     6721 aaaggaacgt cgccgtacaa caccagcgtg cggccttcgg cggcaaggtg gggcagggcg
     6781 gttttgacgg cgtggccggt gccgagctgt tcggtttgtt caacccagac gacatcgcgt
     6841 ttgacggtgt ctaaaacttg ctctttgccg tggccgacga cgacgcagat gttttgcgga
     6901 ttcagcgcgg cggcggtgcc gataacgcgc ccgagcattg tttcgccgcc gatttcgtgc
     6961 aaaaccttgg gcattttgga atacatgcgc gtgcctttgc cggcggcgag gatgacgatg
     7021 tttaaagtgt tttgcggcat agcgttttcc tgtgcaatgc cgtctgaaag ggcttcagac
     7081 ggcatagggt gggtttatcg gttttgaaat ttgggctttt gccagtgttg gcgatgctct
     7141 tcgtcggcgt tgttgccggt ttggttgggt aacacggcat ggcgttcggg acggtattgg
     7201 ttgtagttca tatttttcga gtagctgccg tcttggtaat aaacgggcgt gccggcggga
     7261 tatttttgac ggacggcggt cttgccgttg ccgtcttgat aagtttccca cgcgcagccc
     7321 gacaaaaggg cggcggtggt catcaggata aggaaggttt tacgcatggc ttttctttcg
     7381 tattttcagg atttagaggg tattgtaatg agtttggcgg tgttctgaca aagtttctgc
     7441 ataccgagcc agttgcgcca tatcgcgtgc gcaggcgtcg ataaaggaca gcgcgtggga
     7501 ttttgcaccg aaccagacgg ttttcatgcc caatgctttt gcctgatgca ggttgtccgc
     7561 gctgtcgtcc accataatgc agcattcggg cggtacgtcc aaaaggcggc agacattgag
     7621 atacgcttgc ggattgggtt tgtacagcag tccgaaatca tccgtgccga acagtgcgtc
     7681 gaaacggttt tccaaaccga gtgcgccgac aacggcacgg acgtaaaacg acggaccgtt
     7741 ggaaaaaacc gccttgcgcc cgttcagacg gcatagggtg tgttccgtat ccgccatgcc
     7801 gtgcagcttg gtcaggattg catcgatcgg atggctttcg cgtaaaaatt cggcgatgtc
     7861 gatttcggga tggtggattt gcagtccggc gagcgttgcg ccgtagcggt gccaatattc
     7921 ctgacgcagg tcggacgcgg cggattcgga gagtttgagg cggcgtgcca tatagcgtgt
     7981 catagcgcgg ttgatgagtg tgaagatgcc tgcgtcggca tcgtgcagcg tgttgtcgag
     8041 gtcgaacagc cacacggtcg ggttttcttg cattttgaac cgtgaaaatt tgttagaatg
     8101 ttattttaca gcgaatagag gaggactcgg aatgaaacgg aaaatttggc tgctgccgct
     8161 gctggcggtt tcggcatacc tgcaggcgca gacggaagtc aggctggcgg tgcataagtc
     8221 gttcagcctg cccaaagggc tgattgcgcg cttcgagcgg gcaaacgatg cgaaggtgtc
     8281 gattattcag gcgggcggcg cgaacgaaat gctcaacaaa ctgattttga gccgcgccaa
     8341 cccgatcgcc gacgcggtgt acggcttgga caacgccaat atcggcaagg cgcgggaaat
     8401 gggcattttg gcggcggcgc aacccggatc cgcccccgtc gcggtcgggc tgccttcggc
     8461 tttggcggtc gattacggct atgtgtccat caattacgac aaaaaatggt ttgaaggcaa
     8521 aaagcttcct ctgccgcaaa ccctgcagga tttgacccgc cccgaatata aaaacctatt
     8581 ggtcgtgccg tctcccgcca cgtcgtcccc ggggctgggc ttcctgatgg cgaacatcag
     8641 cggtctgggc gaagaaggcg cgttcaaatg gtgggcacag atgcggcaga acggcgtgaa
     8701 ggtcgccaaa ggctggagcg aggcgtatta caccgacttt tcgcacaacg gcggcgcgta
     8761 tccgctggtg gtcggttatg ccgccagccc ggcggcggaa gtgtattttt ccaaaggcaa
     8821 atacagcgag ccgccgacgg gcaacctgtt tttaaaaggc ggcgtattcc gccaggtcga
     8881 aggcgcggcg gtcttgaagg gcgcgaaaca gccggaattg gcggcaaaac tggtgcaatg
     8941 gctgcaaagt cgggaagtgc agcaggcggt tccgtccgaa atgtgggttt accccgccgt
     9001 caaaaacacg cgcctgcccg acgtgttccg cttcgcccaa gccccgacgc acaccaccgc
     9061 ccccgcgcag cgcgatattg atgcgaacca gcgcggatgg gtttcccgtt ggattagaac
     9121 ggttttgaaa taaaacaaac ataccgcccc gcagggcttc atacggcatt tttacacctg
     9181 tgccgattac gccgcacggg gcggatgttc gatcaagagg aaaacaatgg acttcaaaca
     9241 atttgatttt ttacacctga tcagtgtttc cggttgggag catctggctg aaaaggcgtg
     9301 ggcgttcggg ctgaaccttg ccgccgcgct gcttattttt ttggtcggaa aatgggcggc
     9361 gaaacgcatt gtcgccgtga tgagggcggc gatgacgcgc gcgcaggtcg atgccacgct
     9421 gattagtttt ttgtgtaatg ttgccaatat cggcttattg attttggtga ttattgccgc
     9481 attgggcaga ttgggcgttt ccacaacatc cgtaaccgcc ttaatcggcg gcgcgggttt
     9541 ggcggtggcg ttgtccttga aagaccagct gtccaatttt gccgccggcg cgctgattat
     9601 cctgttccgc ccgttcaaag tcggcgattt tatccgcgtc ggcggttttg aaggatatgt
     9661 ccgagagatt aaaatggtgc agacttcttt gcggacgacc gacaacgaag aagtcgtgct
     9721 gcccaacagc gtggtgatgg gcaacagcat cgtcaaccgt tccacactgc cgctgtgccg
     9781 cgcccaagtg atagtcggcg tcgattacaa ctgcgatttg aaagtggcga aagaggcggt
     9841 gttgaaagcc gccgtcgaac accccttgag cgttcaaaac gaagagcggc aggccgccgc
     9901 ctacatcacc gccttgggcg acaatgccat cgaaatcaca ttatgggctt gggcaaacga
     9961 agcagaccgc tggacgctgc aatgcgactt gaacgaacaa gtggtcgaaa acctccgcaa
    10021 agtcaatatc aacatcccgt tcccgcaacg cgacatacac atcatcaatt cttaaacgcc
    10081 gtctgaaaga ggagtgggaa atggacgcgc tgcacaccat cgcccgaaac ctgacgaaaa
    10141 aacgtcaaac cgtaagctgt gccgaatcct gcacgggtgg gctgcttgcc gccgtattca
    10201 caagcgttgc aggcagttcg caatggttcg atcaaagttt tgtaacatac agcaacaaag
    10261 ccaaagaaga ccgcttgggc gtgttgcccg aaaccctgct cgaacacggc gcggtcagcc
    10321 gccaaaccgt ctatgagatg gcgcgcggcg cgaaagccgt ggcgcaggcg gattacgccg
    10381 tcggtatttc cggcatcgcc ggtccgggcg gcggcagcga aagcaaaccc gtcggcacgg
    10441 tttggttcgg gtttgccttt ccgggcggaa gttgcgaagc aatgcgccgt tttgacggca
    10501 accgcgaatc cgtccgcgcg caggcggtcg ccttcgcgtt ggaacggttg gcggggctga
    10561 ttgaaaacgg cggcgatgcc gtctaaacaa aatctccgtc tggacaaaat ccccgccgga
    10621 taaaaaatac cgtctgaaac gttgcaggtt tcagacggta ttttgtcggg ttaggcggcg
    10681 gtgcggctta tttcacttta ctcttcaacg cgccgtagcc tgccgcgtcc atttgttcca
    10741 gcgggatgaa tttcaagctc gcgccgttga tgcagtagcg cagtccgcct ttgtcgcgcg
    10801 ggccgtcggg gaagacgtgc cccaagtgtg agtcggcggc gtggctgcgc acttcggtgc
    10861 ggcgcatgtt gtagctgaaa tcatcgtgtt cggtaacgga ttttgcatca atcgggcgcg
    10921 tgaagctcgg ccagccgcag ccggaatcat atttgtcggc ggagctgaac aaaggttcgc
    10981 cgctgacaac gtccacataa atgccgggtt tgaacaaatg gtcgtattcg tggctgaagg
    11041 catattcggt cgcgctgttt tgggtaactt ggtattgctc ttcggtcagg gtgcgtttga
    11101 gttcggcgtc actcggtttt ttatacgttg ccgcgtcgaa gcctttgcct tgcggtgcgg
    11161 tcttggtttt gcccggcagc ggttcgtcgg ctttgcggat atcgatgtgg cagtagccgt
    11221 tggggttttt aatcaagtag tcctgatggt attcctcggc atcgtagaag tttttcagcg
    11281 gctcgttttc aacaacgagg ggcagttggt atttttgctg ctcgcgtttg agggcggcgg
    11341 cgatgacggc tttttcggcg gggtcggtgt agtacacgcc gctgcggtat tgcgtaccgg
    11401 tgtcgttgcc ctgtttgttg aggctggtcg gatcaacgac gcggaagaaa tattgcagga
    11461 tgtcgtctag gctgagtttg tcggcatcgt aggtcacttt gacggtttcg gcgtggcccg
    11521 tatggcggta ggacacgtct tcatagctcg gatttttcgt gttgccgttg gcgtagccgg
    11581 ataccgcgtc aaccacgccg tcgatgcgtt ggaaataggc ttccaagccc cagaagcagc
    11641 cgccggcgag gtaaatggtg cgtgtgttca tgatttttga atcctttttc tgagtgtcgg
    11701 gtttgtagaa cgaatgtttc aagctgccca aatcggcatt cgggtcgcgg attaacgcca
    11761 acgcctgcgc ttcgttgatg ctgcctttga cgatgcgctg cacgtcgccg tctttaccga
    11821 ttaacgccca cgaggggtaa acgctgatat tcaggctttg ggcgatggtg ccgccgttgt
    11881 cggttacgac gggcagcttg ggataattca aaccggcata ccatttttgg aagtcgccgt
    11941 cttttttctc gtgcaaaaag cccggagacg cgacggtaat caggttggcg gagctgaatt
    12001 ttgcatcttg cgcccatttt tcggtctgtc ccaattcgga cagacacaaa ggacaccagc
    12061 ttgcccaaaa tttaatcagc gtcggtttgt cttttttcaa gtaaacactg gcggggcggt
    12121 tgtctgcggt tttcaaagtg gataaagtgt gcggcacggt cgcggctccg gcatcgacga
    12181 ttttgggcga acaagcaccc agcgcaagca ggcagccgaa cttggcgcaa agggaaaaga
    12241 aagtacggtg tttcatttta atgtttcctg tgtggacggt ttgcatgatt agacgtttga
    12301 gatgccgaaa ccttacagcc cggattttca gacaaccttg ccgcgcaaaa tacgctacaa
    12361 tacaccctat ttcaagtttc taaaattaaa aggaaaattc aatgttcagc ttcttccgtc
    12421 gcaagaaaaa acaggaaacg ccggctcccg aggaggctca agttcaggaa actgcagcaa
    12481 aagcagaatc cgaagttact caaatagttg aaaatattaa agaagaagtc gaatctttaa
    12541 cggaaagcgt caaagggcag gtcgaatcgg ctgttgaaac cgtcagcggt gcggttgaac
    12601 aggtaaagga aaccgttgcc gagatgctgt ctgaagcaga ggaagcggcg gaaaaagcag
    12661 cggaacaagt cgaagcggca aaagaagccg ttgccgaaac cgtcggcgag gctgtcgggc
    12721 aagttcaaga agccgttgcg acaactgaag aacacaagct cggttgggcg gcgcgtttga
    12781 aacaaggttt gaccaaatcg cgcgacaaaa tggcgaaatc gctggcgggc gtgttcggcg
    12841 gcggacaaat cgacgaagat ttgtacgaag agctggaaac cgtgctgatt accagcgata
    12901 tgggcatgga agccaccgaa tacctgatga aagacgtgcg cgaccgcgtc agcctcaaag
    12961 ggctgaaaga cggcaacgaa ttgcgcggcg cgctgaaaga agccttgtac gacctgatta
    13021 agcctctaga gaaaccgctg gttttgcccg aaaccaaaga gccgtttgtc atcatgcttg
    13081 ctggcatcaa cggcgcgggc aaaaccacat ccatcggcaa actcgccaaa tatttccaag
    13141 cgcagggcaa atctgtgctg cttgccgccg gcgatacttt ccgcgccgcc gcgcgtgagc
    13201 agcttcaagc ttggggcgaa cgcaacaacg taaccgtgat ttcgcaaacc acgggcgatt
    13261 ccgccgccgt gtgcttcgat gccgtccaag ccgccaaagc gcgcggcatc gacattgtgc
    13321 tggccgacac cgccggccgc ctgcccacgc agcttcactt gatggaagaa atcaaaaaag
    13381 tgaaacgcgt gctgcaaaaa gccatgcccg acgcgccaca cgaaatcatc gtcgtgcttg
    13441 atgccaatat cggtcaaaac gccgtcaacc aagtcaaagc ctttgacgac gcattggggc
    13501 tgaccggttt aattgttacc aagctagacg gcacggcaaa aggcggcatc ctcgccgcgc
    13561 ttgcctccga ccgccccgtc cccgtccgct atatcggcgt gggcgaaggc atagacgatt
    13621 tgcgcccgtt tgacgcgcgc gcgtttgtgg acgcactgct ggattgagcc gaaatgccgt
    13681 ccgaaaacag cagaccgatg ccgtcattcc cgcgcaggcg ggaatccaga ctgtcgggca
    13741 tctgcagcgg tttgctaaaa aacgctttac cgtgatcagt gtgcaaagtt aaaatgggga
    13801 ggtaagcttt tcaaccagca attcggcggg cgcggaatcg ggcggtttac cgaacctcgg
    13861 cgttcgcggc gcgccgcccc gtcccgtgaa ggcaaactca aggaataaaa gatgaataaa
    13921 acttggaaac ggcaggtttt ccgccatacc gcgctttata ccgccatatt gatgttttcc
    13981 cataccggcg gggggggggc gcaggcgcaa acgcaaacgc aaacgcataa atacgctatt
    14041 gtaatgaacg gacaaaagct gcccgaggta aagtggggga ctggctatag aaatttggcg
    14101 caaaaaagca atgaacgcca atttacccat acgagtggtt tcggcatcaa aaaaaacgta
    14161 actttatcat tcaataatac cgatgaagtt gttgctcaaa aaaacggtac tgtcgttttc
    14221 ggcgcggcga cctacctgcc gccctacggc aaggtttccg gttttgatac cgctaagctg
    14281 accgagcgcg gcaaagccgt tgattggatt cgtacgaccc acccggggtt gataggctac
    14341 agctacgaaa atgtcacatg cagcaataac tactacaacg ccagcagcgg ctgtcctgaa
    14401 cttagctata aaacccaatt tacctttggt aatcaagggt tgaaaagaaa gacaaacggc
    14461 aggctggata tagacgaaga caaaagccgc gacggttcgc ccatttacaa attgcagaat
    14521 tatccctggt tgggcgtgtc tttcaatttg agcagcgaga gcctcgtcaa atcaataaaa
    14581 tacaataaaa ttatatcttc ttttagcgag gacgtgacgc agagcaatgg tacgaacagc
    14641 caatacaaag acaaaaacct cgtttatacg acaggcgatt accagtataa gaataaatat
    14701 tcttcccgtt atgtcgggca ggacgaacac tccgccgtcg ccttttatct gaacgccaaa
    14761 ctgcacctgc tggataaaaa acaaatccaa aatatcgcgc aagtcagtga acttaatttt
    14821 ggtacgttga gaacgctcat cgagccgacg gaagagtgga aaaaaaagag gacgaacttt
    14881 tttcaaggtg gtaattggac gtttgaagat aaaggagaag tcagcgtcaa actcaaattg
    14941 ccggaagtca aagcaggccg ctgcgtcaac aaaaataacc ccaatcccaa tgccaaagcc
    15001 ccctcccccg cactgaccgc ccccgcgctg tggttcggac ctgtgcaaaa tggtaaggtg
//
LOCUS       DBBZXU010000043        14892 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.043, whole genome shotgun sequence.
ACCESSION   DBBZXU010000043 DBBZXU010000000
VERSION     DBBZXU010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14892)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14892)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14892
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.043"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..217
                     /locus_tag="ACJJDE_001135"
     CDS             <1..217
                     /locus_tag="ACJJDE_001135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541074.1"
                     /translation="SLHIENAAQANFQFASLVLALSHGERGLGCRLPLRFRQILTSLI
                     PRFSFAEAALSDDLLEHHRYTHLRNAV"
     gene            complement(228..551)
                     /locus_tag="ACJJDE_001136"
     CDS             complement(228..551)
                     /locus_tag="ACJJDE_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HGG7541075.1"
                     /translation="MDIVQLGPAELKAWMDEGRMFCLLDVRTDEETAVCSLPNALHIP
                     MNLIPLRQNELPDDVPLVVYCHHGIRSLHTAMYLADAGFENLYNLQGGIDAWAAEIDG
                     NMMRY"
     gene            complement(631..1287)
                     /locus_tag="ACJJDE_001137"
     CDS             complement(631..1287)
                     /locus_tag="ACJJDE_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HGG7541076.1"
                     /translation="MDFEKARFNMVEQQIRPWDVLDFDVLDALAEIPRELFVDEDLQG
                     LAYADMALPLANGHKMLEPKVVARLAQGLKLTKNDTVLEIGTGSGYATALLAKLAGRV
                     VSDDIDAEQQNRAKAVLDGLGLDNIDYVQNNGLTELSAGAPFDAVYVGGAVNLVPEVL
                     KEQLKDGGRMVVIVGRKPVQRALLITRRGDVFEEKVLFDTLVAHLDDKDADPFGGFDF
                     "
     gene            complement(1389..1916)
                     /locus_tag="ACJJDE_001138"
     CDS             complement(1389..1916)
                     /locus_tag="ACJJDE_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033745 - L-methionine-(R)-S-oxide
                     reductase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HGG7541077.1"
                     /translation="MYATIGDVMHALHFSASDKAALYREVLPQIESVVADEADWVANL
                     ANTAAVLKEAFGWFWVGFYLVDTRTDELVLAPFQGPLACTRIPFGRGVCGQAWAKGKT
                     MVVKDVNAHPDHIACSSLSRSEIVVPLFSDGRCIGVLDADSEHLAQFDETDALYLGEL
                     AKILEKRFEASRQAV"
     gene            2076..2849
                     /gene="tpiA"
                     /locus_tag="ACJJDE_001139"
     CDS             2076..2849
                     /gene="tpiA"
                     /locus_tag="ACJJDE_001139"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HGG7541078.1"
                     /translation="MYRQIGMWDQKWVIGNWKMNGRLQNNNALMHRFRILPTAERVLI
                     GLAAPTVYLLQLHNAMQIVLNNRILTCAQDVSRFPDNGAYTGEVSAEMLADTGTDIVL
                     IGHSERSLYFGEKNEIQRRKMENVLNVGLIPLLCVGESLEEREAGKEHEVIAHQLSIL
                     QGLDTKNIAVAYEPVWAIGTGKVATVEQIADMHAFIYKEILSLCGSDVKIRVLYGGSV
                     KADNAADIFAVPYVDGALVGGASLSYDSFTAIISAAQNA"
     gene            2856..3206
                     /gene="secG"
                     /locus_tag="ACJJDE_001140"
     CDS             2856..3206
                     /gene="secG"
                     /locus_tag="ACJJDE_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015136 - sialic acid transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015739 - sialic acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HGG7541079.1"
                     /translation="MEAFKTLIWIVNIISALAVIVLVLLQHGKGADAGATFGSGSGSA
                     QGVFGSAGNANFLSRSTAVAATFFFATCMAMVYIHTHTTKHGLDFSNVQQTQQAPKPV
                     SNTEPSAPVPQQQK"
     gene            3220..3305
                     /locus_tag="ACJJDE_001141"
     tRNA            3220..3305
                     /locus_tag="ACJJDE_001141"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3254..3256,aa:Leu,seq:gag)
     gene            4115..4483
                     /locus_tag="ACJJDE_001142"
     CDS             4115..4483
                     /locus_tag="ACJJDE_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HGG7541080.1"
                     /translation="MRIFKNQWIVKFAKKHKINDSELLEAVERADNGLIDADLGGGVI
                     KQRIARQGQGRSGGYRSLILFKQADRAFFVYAFAKNDRENISDKELDVYRKAAAYYLK
                     YTRAELAALKEDGIITEIES"
     gene            4480..4791
                     /locus_tag="ACJJDE_001143"
     CDS             4480..4791
                     /locus_tag="ACJJDE_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7541081.1"
                     /translation="MKYKSEALAAIHEMMEGAYNIGAIDKKTMRGFDKSCLTEIKPLS
                     GGDIKAIREKEALSQAAFAIYLNVGKNHVSAWERGVKKPSGAALKLLTIVKNKGIEAI
                     A"
     gene            complement(5174..5908)
                     /locus_tag="ACJJDE_001144"
     CDS             complement(5174..5908)
                     /locus_tag="ACJJDE_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HGG7541082.1"
                     /translation="MNAAAAKDYMKTVELNKSAGNVDTTSRTARRVQAVFRRMLPYAD
                     AANNTGHRFDWKMTVFKNDELNAWAMPGGKMAFYTGIVDKLKLTDDEIAAIMGHEMTH
                     ALHEHGKNKVGQQILTNTAAQIGTQIILDKKPDTNPELVGLGMDILGTYGLTLPYSRS
                     LEEEADEGGMMLMAQAGYHPAAAVRVWEKMNQENDQNGFIYAITSTHPTNNARIENLK
                     RLLPTVMPVYEQSVRNKGRVNKKRRR"
     gene            complement(6131..6262)
                     /locus_tag="ACJJDE_001145"
     CDS             complement(6131..6262)
                     /locus_tag="ACJJDE_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl-tRNA synthetase"
                     /protein_id="HGG7541083.1"
                     /translation="MRDFDKLAEEAAEHAAEGAVKFIDGKPAKKIIAVPGRLANIVV"
     gene            complement(6392..7183)
                     /locus_tag="ACJJDE_001146"
     CDS             complement(6392..7183)
                     /locus_tag="ACJJDE_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DpnI domain-containing protein"
                     /protein_id="HGG7541084.1"
                     /translation="MNLFFDTKLGKQQNKATHKIRVMSEAWLEKNGYCPCCGSKPMQR
                     FANNKPVADLFCSNCHEQYELKSKNQKTIGNSVPDGAYRTMLERIRSDTNPNFFFLAY
                     KKADYSIRQLVLVPKHFITPDMIIPRNKGIKNRPHHIMCSINLAPLPESGKIFLIDDS
                     RIIEPETVLKKWQSNLFLRNQNAERKGWLLAVMKCIDQLPEEFTLSQIYEFENKLSIQ
                     FPQNNHIRDKIRQQLQILRDQNTIEFIGRGLYKKIDKLPPTSKAF"
     gene            complement(7413..10043)
                     /gene="leuS"
                     /locus_tag="ACJJDE_001147"
     CDS             complement(7413..10043)
                     /gene="leuS"
                     /locus_tag="ACJJDE_001147"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HGG7541085.1"
                     /translation="MQEQYQPAAIEPAAQKKWDDARIFNVSEDASKPKYYCLSMFPYP
                     SGKLHMGHVRNYTIGDVLSRFKLLNGFNVMQPMGWDAFGMPAENAAMKNNVAPAAWTY
                     DNIEYMKTQLKSLGFAIDWARETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWDP
                     VDQTVLANEQVIDGRGWRSGALIEKREIPMYYFKITDYAEELLNDLDKLEHWPEQVKT
                     MQRNWIGKSRGMTVRFAVSDDSKQGLEGDYAKFLQVYTTRPDTLMGATYVAVAAEHPL
                     ATAAAADKPELQEFIAECKAGSVAEADMATMEKKGVPTGRYVVNPLNGDKLEVWIANY
                     VLWGYGDGAVMAVPAHDERDFEFATKYNLPKKQVIAVGDNAFDENQWQEWYGDKENGV
                     LVNSGDLDGLDFQTAFDAVAAKLQSQGAGEPKTQYRLRDWGISRQRYWGCPIPIVHCE
                     QCGDVPVPADQLPVVLPENVVPDGMGSPLAKMPEFYETACPCCGGAAKRETDTMDTFM
                     ESSWYFFRYMSPKFSDGMVDPAAAKYWGAVDQYIGGIEHAILHLLYARFFTKLMRDEG
                     LVNVDEPFERLLTQGMVVCETYYRENDKGGKDWINPADVELTFDDKGRPISAVLKADG
                     LPVVISGTEKMSKSKNNGVDPQELINAYGADTARLFMMFAAPPEQSLEWSDSGVEGAH
                     RFLRRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQF
                     NTAIAAVMELLNQYDKTDTGGEQGRAVAQEVLETAVRLLWPIVPHICETLWSELNGAK
                     LWEAGWPTVDEAALVKSEIEVMVQVNGKLRGKITVAADASKADLEAAALATEGAVKFM
                     EGKPAKKIIVVPGRLVNIVV"
     gene            10313..10828
                     /locus_tag="ACJJDE_001148"
     CDS             10313..10828
                     /locus_tag="ACJJDE_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7541086.1"
                     /translation="MKIKQIVKPGLAVLAAGVLSACATKSNVKADGTTDNPVFPKPYS
                     VTLDNKRGTFPTYDELDQMRPGLTKDDIYKILGRPHYDEGMYGVREWDYLFHFHTPGV
                     GIDPENTSGVEDVTTCQYKVIFDKDKFARSFYWNPVFPKDAACPPPAPKAEPQVIIRE
                     IVPAKPKRIRQ"
     gene            10835..11278
                     /locus_tag="ACJJDE_001149"
     CDS             10835..11278
                     /locus_tag="ACJJDE_001149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HGG7541087.1"
                     /translation="MPFRLFLGILCGLSMVAPVYAQGQPDAINAYIQKKKVIVDTSKA
                     ELCFADDRQCHPVLIGVATPKGTFGLTLNSTDKPGYGGEVIGFKQEGDFLFALHRVWN
                     QIPSERRNERIASPSVSDRIMTNGCINVSDAVYEKLRHYFVLEVI"
     gene            11447..13504
                     /gene="ppk1"
                     /locus_tag="ACJJDE_001150"
     CDS             11447..13504
                     /gene="ppk1"
                     /locus_tag="ACJJDE_001150"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HGG7541088.1"
                     /translation="MPEQNRILCRELSLLAFNRRVLAQAEDKNVPLLERLRFLCIVSS
                     NLDEFFEVRMAWLKRENKLHPRRRLDNGKMPSETIADVTEAARSLIRHQYDLFNNVLQ
                     PELARESIHFYRRRNWTGAQKKWIEDYFDRELLPILTPIGLDPSHPFPRPLNKSLNFA
                     VELDGTDAFGRPSGMAIVQAPRILPRVVPLPSELCGGGHGFVFLSSILHAHVGKLFPG
                     MNVKGCHQFRLTRDSDLNVDEEDVQNLRAAVQNELHDREYGDGVRLEVADTCPARIRD
                     FLLSQFRLTADELYQVKGPVNLVRLNAVPDLVNRPDLKFPPHTPGRLKALGKTASIFD
                     LVRQSPILLHHPYQSFDPVVEMMREAAADPAVLAVKMTIYRTGTRSELVRALMKAALA
                     GKQVTVVVELMARFDEANNVNWAKQLEEAGAHVVYGVFGYKIHAKMALVIRREDGVLK
                     RYAHLGTGNYHQGTSRIYTDFGIITADEQITADVNTLFMEITGLGKPGRLNKLYQSPF
                     TLHKMVIGRIRQETEHAKAGKPARITAKMNSLIEPTVIEALYRASAAGVQIDLIVRGM
                     CTLRPGVKGLSENIRVRSIVGRQLEHARVYCFHNNGADDTFISSADWMGRNFFRRIET
                     AAPITAPELKKRVIREGLEMALADNTHAWLMQPDGGYIRAAPAEGESEADLQNDLWTL
                     LGG"
     gene            13529..13798
                     /locus_tag="ACJJDE_001151"
     CDS             13529..13798
                     /locus_tag="ACJJDE_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541089.1"
                     /translation="MPSETFPFQTAWFYSNLNRADWNQKHTFAIPAQALPLYAPNPNP
                     PHSRRHCLSDSRTKPRIRLHGSGHISNTGIVLRKTVKSASASQYI"
     gene            complement(13767..14870)
                     /gene="dnaN"
                     /locus_tag="ACJJDE_001152"
     CDS             complement(13767..14870)
                     /gene="dnaN"
                     /locus_tag="ACJJDE_001152"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HGG7541090.1"
                     /translation="MLILQAERDSLLKPLQAVTGIVERRHTLPILSNVLIEGKGGQTK
                     LLATDLEIQIDTAGPEGGADDFRITTNAKKFQDILRALPAGALVSLDWDDSRLTLKAG
                     KSRFALQTLPAADFPMMNVGEDISATFSLEQERFKTMLSQVQYSMAVQDIRYYLNGLL
                     MQVEGSQLRLVATDGHRLAYAACAIDADLPRAEVILPRKTVLELFKLLNNPDDPIQIE
                     LLDKQVRFQCNGTTIVSKVIDGKFPDFNRVIPLDNDKIFVLSRAELLGALERVSILAN
                     EKFRGARLFLQSGLLSVVCSNNEQEEAREEIEIAYQGGELEVGFNIGYLMDVLRNIHS
                     DDMQLAFGDANRSTLFTVPNNPNFKYIVMPMRI"
BASE COUNT         3606 a         4215 c         3724 g         3347 t
ORIGIN      
        1 cagcctgcac attgaaaatg ccgcccaagc aaactttcag tttgccagcc tcgtcctagc
       61 cctctcccac ggggagaggg gattggggtg caggctgcct ttaaggttca ggcaaatttt
      121 aacttcgttg ataccgcgct ttagcttcgc agaagctgca ctttcagacg accttttgga
      181 acaccacagg tacacgcatt taaggaatgc cgtctgaaat gcctgcctca ataacgcatc
      241 atgttgccgt caatctcggc cgcccatgca tcgatgccgc cctgaaggtt gtacaggttt
      301 tcaaaacccg cgtccgccaa atacatcgcc gtatgcagac tgcggatacc gtgatggcaa
      361 tacaccacaa gcggcacatc atccggcagc tcgttctgcc gcagcggaat cagattcatc
      421 gggatatgca gcgcatttgg cagcgaacaa accgccgttt cttcatccgt acgcacgtcc
      481 aacaaacaaa acatccgccc ttcgtccatc cacgctttca attccgcggg cccaagttgc
      541 acaatatcca tcgcaccccc caaaaaaaac caagcaaaat gccgtctgaa gccccaaacc
      601 cgctttcaga cggcatgacc tgtcaacatc ttaaaaatcg aaaccgccaa acggatcggc
      661 atccttatca tccaaatgcg ccaccaaggt atcgaacagc accttctctt caaacacatc
      721 gcccctgcgc gtaatcaaaa gcgcgcgttg aacaggcttg cgacctacga taaccaccat
      781 gcgtccgcca tctttcaact gttctttcaa cacttcaggc acaaggttta ccgcaccgcc
      841 gacataaacc gcatcaaacg gcgcacctgc ggaaagttcg gtcaacccgt tgttttgcac
      901 ataatcgata ttgtccaaac ccaagccgtc caacaccgct ttggcgcggt tttgctgttc
      961 ggcatcgatg tcgtccgaca ccacacgacc agccaatttt gccaacagcg cggtcgcata
     1021 gcccgaaccc gtgccgattt ccaaaaccgt atcgtttttc gtcagcttca agccctgcgc
     1081 cagccgcgcc acgactttcg gctcgagcat cttatgaccg ttggcaagcg gcagcgccat
     1141 atccgcatac gccaaaccct gcaagtcctc atcgacaaaa agctcgcgcg gaatctccgc
     1201 caaagcgtcc aaaacgtcaa aatccaatac atcccaagga cggatttgct gttcgaccat
     1261 attgaaccgc gctttttcaa aatccattta gtgctccgtc aaataattgt tccaacaata
     1321 gcaggcatta taaaaccaca ctcccgccgc gccaacttcg gcacgcgccg cccgcccctt
     1381 tccctcactc aaaccgcctg acgcgaagcc tcaaaccgct tctccaaaat cttcgccagc
     1441 tcgcccaaat acaaagcatc tgtctcatca aactgcgcca aatgttcgct gtccgcgtcc
     1501 aacacgccga tacagcggcc gtctgaaaac agcggcacga caatctccga acgcgacaaa
     1561 gacgaacagg caatatggtc gggatgcgcg ttcacatcct tgaccaccat cgtcttgccc
     1621 ttcgcccaag cctgaccgca caccccgcgt ccgaacggaa tccgcgtaca cgccaaaggc
     1681 ccctgaaacg gtgccaaaac caattcgtcc gtgcgcgtat cgaccaaata aaaacccacc
     1741 caaaaccaac cgaacgcctc cttcaaaacc gccgccgtgt tcgccaaatt cgccacccaa
     1801 tccgcctcgt cagccaccac agactcaatc tgcggcaaca cctcccgata aagcgcggcc
     1861 ttgtccgaag ccgaaaaatg aagcgcgtgc atcacatctc ctatagttgc atacatatca
     1921 ggcggccatt ataaaacaac ctgcccgaaa caacattccg aaccgccccc gcagccgccc
     1981 gccccaagtt gcgaacccgc cgcatatcca ctaaacttca cattgcaacg cgccacacgc
     2041 ggcagacaga aaaaacacga cacggagcaa aaaagatgta tcgccaaatc ggaatgtggg
     2101 atcaaaaatg ggtcatcggc aactggaaaa tgaacggccg gctccaaaac aacaacgcac
     2161 tgatgcaccg cttccgcatc ctccccaccg ccgaacgcgt cctcatcgga ctcgccgccc
     2221 cgaccgttta cctgctgcaa ctgcacaacg ccatgcaaat cgtcttaaac aaccgcatcc
     2281 tcacctgcgc ccaagacgtg agccgcttcc ccgacaacgg cgcgtacacc ggcgaagtgt
     2341 ccgccgaaat gctcgccgac accggcacag acatcgtcct catcggacac tccgaacgca
     2401 gcctttattt cggcgaaaaa aacgaaatcc aacgccgcaa aatggaaaac gtcctcaacg
     2461 tcggactcat cccgttattg tgcgtcggcg aaagcctcga agagcgcgaa gccggcaaag
     2521 aacacgaagt catcgcccat cagctttcca tcctccaagg actggacacc aaaaacatcg
     2581 ccgtcgccta cgaacccgtc tgggcaatcg gcaccggcaa agtcgccacc gtcgaacaga
     2641 ttgccgatat gcacgcattc atctacaaag aaatcttgtc tttgtgcgga agcgatgtta
     2701 aaatccgtgt cctttacggc ggaagtgtga aagcggacaa cgcggccgac atcttcgcag
     2761 taccttatgt ggacggcgca ctcgtcggcg gcgcgtcatt gtcgtacgac tcctttaccg
     2821 ccatcatcag tgccgcacaa aatgcgtaga aaaatatgga agccttcaaa accctaattt
     2881 ggattgttaa tataatttcc gctttggccg tcatcgtgtt agtattgctc caacacggca
     2941 aaggcgcgga tgccggcgcg actttcggat cgggaagcgg cagcgcgcaa ggcgtattcg
     3001 gctctgccgg caacgctaac ttcctcagcc gctcgaccgc cgttgcagca acatttttct
     3061 ttgcaacctg catggctatg gtgtatattc acacccacac aacaaaacac ggtttggact
     3121 tcagcaacgt acaacaaact cagcaagcac ccaaacccgt aagcaatacc gaaccttctg
     3181 cccctgttcc tcagcagcag aaataacagt ttttcaaatg ccgacatggt gaaattggta
     3241 gacacgctat cttgaggggg tagtggccgt aggctgtgcg agttcaaatc tcgctgtcgg
     3301 caccaacaca caaaacgctt agaaattcta agcgtttttt tcgtttaatc ctgtctaatg
     3361 ccgtcaacca atcccaatca atacaaggct ttcagactgg ttgctatcct attgtcttct
     3421 tcctgattgt ataattccgt ttaattcagc ctaattgaag taacctaaaa tttacggtat
     3481 cttttgcggt atctgaaaaa tacctcgaaa aaataccgca aaaataaagc tgaacgacca
     3541 ccaaatcagg aatgccaagc gggaaatagc ttgcggggaa tactgacgca ccgtagggaa
     3601 tgagggggaa accgtccaag atgcagagcg gttttttttg ggtttttgga aaaaacctat
     3661 actatagtgg attaaattta aaccggtacg gcgttgcctc gccttgccgt accggtttaa
     3721 atttaatcca ctataaaata agaaaaagat aaaaaattgg taacaaatgc ggtaacaaat
     3781 ggtaacgaat cggtaacaac ttttggggtt ttccggtttt tcaccgtctt ggcagtggga
     3841 gcgtagcgga atgaaaagcc aaaacgcacg gaaccgcgcc tattttgagc aggaatggcg
     3901 gttaaaccgc ttggttatat actggcatag gaagacagcg aaacgcgcta aaaacgcaat
     3961 ttgagccatt aaaagcgatt gattaaaaaa taatcaggtt agccgccggt gtttcaggcg
     4021 gcataaacgg agaaattgca gggtataaaa aggcgacttg ccgccttgcc tgtctctggt
     4081 ataattccaa gtatcactaa tcaacggcta cacaatgcgg atattcaaaa accaatggat
     4141 agtgaaattt gccaagaagc acaaaatcaa cgattccgag ctgctggaag cggtagagcg
     4201 ggcggataac gggctgatag acgcagattt aggcggcggt gtgattaagc agcgcatagc
     4261 aaggcaagga caaggcagaa gcggcggcta tcgcagcctg atattgttca aacaggcaga
     4321 tagggcattt ttcgtttacg cctttgccaa gaacgacagg gaaaacattt cggataaaga
     4381 actggacgtt taccgaaaag ccgccgcata ttatctgaaa tacacgcggg cagagctggc
     4441 ggctttgaaa gaagacggca ttatcacgga gatagaatca tgaaatacaa aagcgaggca
     4501 ttagccgcca ttcatgaaat gatggaaggg gcttacaaca tcggcgcaat cgacaaaaag
     4561 actatgcgcg gctttgacaa gtcctgcctg accgaaatca aaccgttgag cggcggggac
     4621 atcaaggcaa tcagggagaa ggaggcacta tcgcaagccg ctttcgccat ctatctcaac
     4681 gtgggaaaaa atcacgtttc ggcttgggag cggggcgtta aaaagccgag cggcgcggcg
     4741 ttgaagctgc tgaccatcgt caaaaacaag ggcatcgaag ccattgcgta gccgacttgg
     4801 caaacggcaa aatcagcaag ttcacaatag acgcgctgct gaatatgcct gccaagacag
     4861 gcaagaccgc cgaactgaat atcagggcgt agccgcataa atgcccgacc gcatcaaacc
     4921 aagccgaaac ggcggcggtg cagacgacat agcccgacag caaggcacgg cgcagacggg
     4981 cgcgaaaccc gaaacatcac cgaccgcgag gtacggggat tttttgcgcc cgttgcaggg
     5041 ggggattgga tttaagcggc gcgggcttga aggcaaaacg ggtggggcac agaactgttt
     5101 aaatgcagtc tgaatctcaa acgatttcag acggcatttt gaaacaatgg ctcaaattct
     5161 cgatcccctt cccttaacgc cgacgttttt tattaacgcg ccccttattt ctgacacttt
     5221 gctcataaac cggcataacg gtcggcaaca accgttttag attttctata cgggcattgt
     5281 ttgtcggatg agtagaggta atagcataaa taaagccgtt ttggtcgttt tcctgattca
     5341 ttttttccca aaccctgaca gcggccgccg gatgatagcc tgcctgcgcc atcaacatca
     5401 ttcccccctc atcggcttct tcttccaagc tgcggctata aggcaaggta agaccgtacg
     5461 tccccaaaat atccataccc aatccgacca attccggatt agtatccggt tttttgtcta
     5521 atataatctg cgtgcctatc tgcgccgccg tattggtcaa gatttgctgc ccgaccttat
     5581 ttttaccgtg ttcatgcagg gcgtgcgtca tttcatgccc cataatggcg gcaatttcgt
     5641 catcggtcag cttgagtttg tcgactatcc ccgtataaaa cgccattttt ccaccgggca
     5701 tcgcccacgc gttcagctca tcgtttttga aaaccgtcat tttccagtca aacctatggc
     5761 cggtattatt tgccgcatcg gcataaggca gcatacgtcg aaatactgcc tgcaccctgc
     5821 gggctgttct ggatgtggta tcgacattgc cggcagactt gttcaactca accgttttca
     5881 tataatcttt ggcagccgca gcgttcattg tggcggaatc ctgaccgtaa acatcagcaa
     5941 cgaccgtaca agcccccaat accgagatta ctgccgacag gcagagtatc cgtttaaagg
     6001 aaggaaggaa ggaaggaagg aaatttcata ttaggcttac cccttaaaaa attaaattta
     6061 aaaaatgccg tctgaatcta aaacggattt cggacggcat cttaacattg tttgatgttt
     6121 ttaaaaagat ttacaccacg atgttcgcca gtctgcccgg tacggcgatg attttcttgg
     6181 caggcttgcc gtctatgaat ttcaccgcgc cttcagcggc gtgttcggca gcttcttcag
     6241 ccaatttgtc gaaatcacgc ataaattgcc aataattccc cgaccttctt acggctgctg
     6301 ccttttgcgg caatattgtg ctgtacttca actgttttca gaataacaga agaataaata
     6361 tcccttgtga attcagtatc atgatttgaa attaaaacgc cttggaagtc gggggcaatt
     6421 tgtcgatttt tttgtaaagt ccgcgaccaa tgaattcgat cgtattttgg tcgcgcaaaa
     6481 tttgcaactg ttggcggatt ttgtctctga tatggttgtt ttggggaaat tggatggata
     6541 gtttgttttc aaattcatat atttgcgaca atgtgaattc ttcgggaagt tggtcgatac
     6601 atttcataac agccaaaagc cagcctttgc gctccgcatt ttggttgcgt aaaaacagat
     6661 tggattgcca ttttttcaga acggtttcgg gttcgataat gcgggaatcg tctattaaga
     6721 atattttgcc gctttcgggc aaaggggcga gattgatgga acacataatg tggtgcggcc
     6781 ggtttttaat gcctttattt ctgggaataa tcatgtccgg cgtgatgaaa tgtttgggta
     6841 caagcaccaa ttgccgtata gagtaatccg cttttttata tgcaagaaag aaaaagttgg
     6901 ggttggtatc tgaccggatg cgctccaaca tagtgcgata tgcaccgtca ggcacactgt
     6961 tacctatggt tttttgattt ttactcttta attcatattg ctcgtggcaa tttgagcaaa
     7021 agaggtctgc aacaggtttg ttattggcaa atctctgcat cggcttgctt ccgcaacagg
     7081 ggcagtagcc gtttttttcc agccaagcct cactcattac acggatttta tgggttgctt
     7141 tattttgttg ctttcccaat ttggtatcga aaaataaatt catgttttgg attttgagat
     7201 ttcagtttta gtggattaac aaaaatcagg acaaggcgac gaagccgcag acagcagggc
     7261 aaggcggggc aacgtcgtac cggtttaaag ttaatccact atatttgagg tctgtaatgc
     7321 agacaaccca atctgcctta aaaaggccgt ctgaaaccct gtttccaagt ttcagacggc
     7381 ctttatccgt gtggctaaac cttaagagcg gtttagacga cgatgttcac cagtctgccc
     7441 ggtacgacga tgattttctt cgcgggcttg ccttccatga atttcaccgc gccttcagtg
     7501 gcaagggcgg cggcttcgag gtcggctttg gaggcgtcgg cggcgacggt gattttgccg
     7561 cgcagtttgc cgttgacttg aaccatcact tcgatttcgg atttgaccaa ggcggcttcg
     7621 tcgactgtcg gccagcctgc ttcccacagt ttcgcgccgt tcaattcgct ccacagggtt
     7681 tcgcagatgt gcggcacgat gggccacaac aggcgtacgg cggtttccaa tacttcttgg
     7741 gcgacggcgc gtccttgttc gccgccggtg tcggttttgt cgtattggtt gagcaattcc
     7801 atcacggcgg cgatggcggt gttgaactgc tggcggcggc cgtagtcgtc gctgactttg
     7861 gcagtggtcg cgtgcagttt gtggcgcagg tctttgagtt ctttagacaa accgtcttgg
     7921 ctgcctgcga acgctttgac cgcttcgcct tgcttcaagt attcgtaaac ggtacgccac
     7981 aggcggcgca ggaagcggtg tgcgccttcg acgccgctgt cgctccattc gagggactgt
     8041 tcgggcggtg cggcgaacat cataaacagg cgggcggtgt ccgcgccgta ggcgttaatc
     8101 agttcttgcg gatcgacgcc gttgtttttg gacttggaca ttttttccgt gccgctgatg
     8161 acgacgggca gcccgtcggc tttgaggacg gcggaaatgg ggcggccttt gtcgtcgaac
     8221 gtcagctcga catcggcggg gttgatccaa tctttgccgc ctttgtcgtt ttcgcggtag
     8281 taggtttcgc aaacgaccat gccttgcgtc agcaggcgtt caaacggttc gtcaacattg
     8341 actagacctt cgtcgcgcat cagtttggtg aagaaacgcg cgtacaagag gtgcaaaatc
     8401 gcgtgttcga tgccgccgat gtattggtcg accgcgcccc agtatttcgc ggcggcagga
     8461 tcgaccatgc cgtctgaaaa ttttggcgac atgtagcgga agaaatacca gctcgattcc
     8521 atgaaggtgt ccatggtgtc ggtttcgcgt ttcgccgcgc cgccgcagca tgggcaggca
     8581 gtttcgtaaa actcgggcat ttttgccagc ggcgaaccca tgccgtcggg tacgacgttt
     8641 tcaggcaaaa cgaccggcaa ttggtcggca gggacgggta cgtcgccgca ttgttcgcaa
     8701 tggacgatgg gaatcgggca gccccagtag cgttggcgcg aaatgcccca gtcgcgcagg
     8761 cggtattggg ttttcggttc gcccgcgcct tggctttgca gcttggcggc gacggcgtcg
     8821 aatgccgtct gaaaatccaa gccgtccaag tcgccgctgt tgaccaatac gccgttttct
     8881 ttgtcgccgt accattcttg ccattggttt tcgtcaaatg cgttgtcgcc gacggcaatg
     8941 acttgttttt tcggcagatt gtatttggtg gcgaactcaa aatcgcgttc gtcgtgcgcc
     9001 ggaaccgcca tcaccgcgcc gtcgccgtag ccccacaata catagttggc aatccacact
     9061 tccagcttgt cgccgttgag cgggttgacg acgtagcggc cggtcggcac gccttttttc
     9121 tccatcgtcg ccatatcggc ttcggcgacc gagccggctt tgcattcggc gataaactct
     9181 tgcaattcag gtttgtcggc ggctgcggcg gttgccagcg gatgctcggc ggcaacggcg
     9241 acataagtcg cgcccatcag cgtgtcgggg cgggtggtgt aaacttgcag gaatttcgcg
     9301 taatcgcctt ccaaaccttg tttgctgtcg tctgaaacgg cgaagcgcac ggtcatgccg
     9361 cgagatttac cgatccagtt gcgctgcatg gttttgactt gttccggcca gtgttccagc
     9421 ttgtccaagt cgttgagcag ctcttcggcg taatccgtga ttttgaagta atacatcggg
     9481 atttcgcgtt tttcgatcaa tgcgccggaa cgccagccgc gtccgtcgat gacttgctcg
     9541 ttggcaagga cggtttggtc gaccggatcc cagtttaccg tgccgttttt gcgatagacg
     9601 atgccttttt caaacagctt ggtaaacagc cattgttccc agcggtagta ttcgggtttg
     9661 caggttgcgg tttcgcgcgc ccagtcaatc gcaaaaccca ggcttttgag ctgggttttc
     9721 atgtattcga tgttatcgta cgtccaagcg gcaggggcga cgttgttttt catcgccgcg
     9781 ttttccgccg gcatgccgaa cgcgtcccaa cccataggct gcatgacgtt gaagccgttt
     9841 aaaagtttga agcggctcaa tacatcgccg atggtgtagt tgcgcacatg ccccatatgc
     9901 agcttgccgc tgggataggg gaacatggag aggcaataat atttgggttt ggaagcgtct
     9961 tcggagacgt tgaaaatacg ggcgtcgtcc cattttttct gcgccgcagg ctcgatggcg
    10021 gcgggttgat attgttcttg catagtcatt ctgttttcgc ttaaaaacgt tggaaaaata
    10081 aagtcggcat caattataac aggttgccgg aagcggcgaa tcggcagatt gccggcagga
    10141 tgcgtaaatt cgcacgcgca ttattccgta tgccgtacaa atacaccgcg tttattgata
    10201 cgcacgtttt ttatgctaat attacaaacc aaaatcaaat gtttaaaact ctcctgatgc
    10261 ggctcttccg aacaaaaggc agacgggcat cgggtaaaag aggattctgc atatgaaaat
    10321 caaacaaatc gtcaaaccgg gcttggcagt attggcggcg ggcgttctgt ctgcctgcgc
    10381 aaccaaaagc aacgtcaaag ccgacggcac gaccgacaat ccggttttcc cgaaacccta
    10441 ttccgtaacg ctcgacaaca agcgcggcac attcccgact tatgacgaac tggatcagat
    10501 gcgccccggc ctgaccaaag acgacatcta caaaatcctg ggccgcccgc attacgacga
    10561 aggtatgtac ggcgtgcgcg aatgggatta cctgttccac ttccataccc cgggcgtagg
    10621 tatcgaccct gaaaacactt ccggcgtaga agatgttact acctgccaat acaaagtgat
    10681 tttcgataaa gacaaatttg cccgcagctt ctactggaac cccgtcttcc cgaaagatgc
    10741 cgcctgtccg ccgcccgcac ccaaagccga gccgcaagtc atcatccgcg aaatcgtgcc
    10801 ggcaaaaccg aaacgtatcc gccaataatc cgacatgccg ttccgcctgt ttttagggat
    10861 attatgcggc ctgtcaatgg ttgcccccgt atatgcacag gggcaaccgg atgcgatcaa
    10921 tgcctatatc caaaagaaaa aagtcatcgt cgatacatcc aaagcggaac tctgtttcgc
    10981 tgacgaccgt cagtgccacc ccgtcctcat cggtgttgcc acgcccaagg ggacgttcgg
    11041 gctgacgctg aacagtaccg acaagcctgg atacggcggc gaagtcatcg gtttcaagca
    11101 ggagggtgat tttcttttcg ccctgcaccg cgtttggaat cagataccgt cggaaaggcg
    11161 gaacgaacgc atcgcctccc cgtccgtgtc cgacaggatt atgaccaacg gctgcatcaa
    11221 cgtcagcgat gcggtgtacg aaaaactgcg tcattatttt gtgttggaag tgatttgaaa
    11281 cagacggata ccgcacgcgc cggtatctgt tttcacattg ccccgatgcc tgaaacaggc
    11341 tgtccgccac gtcatgccgt ctgaaaccgg cgcagatgcc gccaagcctt cagacggcat
    11401 tgcctgcccg ctccgaccga acaacaacca tctttgggag aaccttatgc ccgaacaaaa
    11461 ccgcatcctc tgccgcgaac taagcctgct ggcattcaac cgccgcgtgt tggcacaggc
    11521 ggaagacaaa aacgtccccc ttttggaacg cctgcgcttc ctgtgcatcg tgtcgtccaa
    11581 tcttgacgag tttttcgaag tccgcatggc gtggctcaag cgtgaaaaca agctgcaccc
    11641 ccggcgcagg ctggacaacg gcaaaatgcc gtctgaaacc atcgccgacg ttaccgaagc
    11701 ggcgcgctcc ctgatacggc accagtacga cctgttcaac aacgtccttc agcccgagtt
    11761 ggcgcgggaa agcatccatt tttaccgccg ccgcaactgg acgggcgcgc agaaaaaatg
    11821 gatcgaagac tatttcgacc gcgaactgct gccgatcctg acccccatcg gactcgaccc
    11881 gtcccacccc ttcccgcgac cgctgaacaa atcgctcaac ttcgccgtcg aactcgacgg
    11941 cacggacgcg ttcggcaggc cttcggggat ggcgattgtg caggcaccgc gcatcctgcc
    12001 gcgcgttgtt cccctgccgt ccgaactgtg tggcggcgga cacggcttcg tcttcctctc
    12061 ctccatcctg cacgcccacg tcggcaaact cttcccgggc atgaacgtca aaggctgcca
    12121 ccagttccgc ctgacgcgcg acagcgactt gaacgtcgat gaagaagacg tgcaaaacct
    12181 ccgcgccgcc gttcaaaacg agttgcacga ccgcgaatac ggcgacggcg tgcgcctcga
    12241 agtcgccgac acctgtcccg cccgcatccg cgacttcctg ctgtcgcaat tcaggctgac
    12301 cgccgacgaa ctttaccaag tcaaaggccc cgtgaacctc gtgcgcctca acgccgtccc
    12361 cgatttggtc aaccgccccg atttgaaatt cccgccgcac acgccgggca ggctgaaagc
    12421 cttgggcaaa accgcgtcca tattcgattt ggtgcgccaa tcgcccatcc tgctgcacca
    12481 cccctaccaa tccttcgacc ccgttgtcga aatgatgcgc gaagccgccg ccgaccccgc
    12541 cgtgcttgcc gtcaaaatga cgatttaccg caccggcacg cgctccgaac tcgtccgcgc
    12601 cctgatgaag gcggcactcg ccggcaaaca agtaaccgtc gtcgtcgaac tgatggcgcg
    12661 ttttgacgaa gccaacaacg tcaactgggc gaagcagctc gaagaggcgg gcgcgcacgt
    12721 cgtgtacggc gtgttcggct acaaaatcca cgccaagatg gcactggtca tccgccgcga
    12781 agacggcgtg ctcaagcgtt acgcccacct cggcacgggc aactaccacc aaggcacatc
    12841 gcgcatctac accgacttcg gcatcattac cgccgacgaa caaatcaccg ccgatgtgaa
    12901 cacattgttt atggaaatca caggtttggg caaacccggc cgtctgaaca agctctatca
    12961 aagcccgttt accctgcaca aaatggttat cggacgcatc aggcaggaaa ccgaacacgc
    13021 caaagcaggc aagccggcac ggattactgc caagatgaat tcgctcatcg aaccgaccgt
    13081 catcgaagcc ctgtatcggg caagcgcggc aggcgtgcaa atcgatttga ttgtgcgcgg
    13141 tatgtgcact ctgcgccccg gcgtgaaagg cttgtccgaa aacatccgcg tccgctccat
    13201 cgtcggcagg cagctcgaac acgcgcgcgt gtattgcttc cacaacaacg gcgcggacga
    13261 tacctttatt tccagcgcgg attggatggg gcgcaacttc ttccgccgca tcgaaaccgc
    13321 cgcgccgatt accgcgcccg aactcaaaaa acgcgtgatc cgcgaaggtt tggaaatggc
    13381 attggcagac aacacccacg cctggctgat gcagcccgac ggcggctata tccgcgccgc
    13441 gcctgccgag ggcgaaagcg aagccgacct gcaaaacgat ttgtggacac tgctcggagg
    13501 ctgacccgca ccgccccaat caaaaaccat gccgtctgaa acctttccgt ttcagacggc
    13561 atggttttac agcaatctaa acagggcgga ctggaatcaa aaacacacct tcgccattcc
    13621 cgcacaagca cttcccctat acgctcccaa ccccaatccg ccgcattcca gacggcattg
    13681 cctttccgac agccgaacaa aaccccgaat ccgtctgcac ggttcggggc atatctccaa
    13741 tacgggcatc gtgctccgga aaaccgtcaa atccgcatcg gcatcacaat atatttgaaa
    13801 ttcggattgt tcggcacggt aaacagcgtc gagcggttgg catcgccgaa ggcaagctgc
    13861 atatcgtcgg aatggatgtt gcgcaacacg tccatcagat agccgatatt gaaaccgact
    13921 tcgagttcgc cgccctgata ggcaatctcg atttcttcgc gcgcttcttc ctgctcgttg
    13981 ttgctgcaca cgacgctcaa caggccggat tgcaggaaca ggcgcgcgcc acggaatttt
    14041 tcgttggcaa gaatggacac acgttccagc gcgcccaaaa gttcggcacg ggacaaaacg
    14101 aaaatcttgt cgttgtccaa agggatgacg cggttgaaat cggggaattt gccgtcgata
    14161 accttgctga cgatggtcgt gccgttgcat tggaaacgca cctgcttgtc cagcagctcg
    14221 atttgaatcg gatcgtcggg gttgttcaac agtttgaaca gttccagcac cgttttgcgc
    14281 ggcaaaatca cttcggcgcg cggcaaatcc gcatcaatcg cgcaggctgc ataggcaagg
    14341 cggtgtccgt cggtcgccac aaggcgcaac tggctgccct caacctgcat cagcagaccg
    14401 ttgagataat agcggatgtc ctgcaccgcc atgctgtact gcacttgcga cagcatggtt
    14461 ttgaaacgct cctgctccag cgagaaagtc gcgctgatgt cctcgccgac attcatcatc
    14521 ggaaaatcgg cggcaggcag ggtctgcagg gcaaaacgcg atttgcccgc cttcagcgtc
    14581 agacggctgt cgtcccaatc cagcgacacc agcgcaccgg caggcagcgc gcgcaaaatg
    14641 tcctgaaatt tcttggcatt ggtggtgatg cggaagtcgt ccgcgccgcc ctcgggaccc
    14701 gcagtgtcga tttggatttc caaatcggtt gccaagagtt tggtctgacc gccttttccc
    14761 tcaatcagga cgttggacag gatgggcagg gtgtggcggc gttcgacgat gccggtaacg
    14821 gcttgcagcg gcttgagcag gctgtcgcgt tcggcttgta aaatcaacat gttcgctcct
    14881 ttaaatcggt tt
//
LOCUS       DBBZXU010000044        14881 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.044, whole genome shotgun sequence.
ACCESSION   DBBZXU010000044 DBBZXU010000000
VERSION     DBBZXU010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.044"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..219)
                     /locus_tag="ACJJDE_001153"
     CDS             complement(<1..219)
                     /locus_tag="ACJJDE_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium:proton antiporter"
                     /protein_id="HGG7541091.1"
                     /translation="MDWMGSLFLPGGALLFLSVVSTTLSACLGMPLLLVSPAGVLDGA
                     AEALAIAAFLMLVARPPAVFGGLWKFNYS"
     gene            413..1139
                     /locus_tag="ACJJDE_001154"
                     /pseudo
     CDS             413..1139
                     /locus_tag="ACJJDE_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 family protein"
     gene            1208..2746
                     /gene="lnt"
                     /locus_tag="ACJJDE_001155"
     CDS             1208..2746
                     /gene="lnt"
                     /locus_tag="ACJJDE_001155"
                     /EC_number="2.3.1.269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042158 - lipoprotein biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HGG7541092.1"
                     /translation="MVSKLDKYWQHPALYWPLLILFAAATPFTFAPYYHFWLMPLIFG
                     AFVRLIELRPRFAVSSAYLFGLTAYTTQFYWIHTALHDVSGLPDLYAVPLTFLLPAYL
                     ALYPALCFWLWKKFTLPRGIKIGLVLPILWTLTEFARERFLTGFGWGAIGYSQITPDS
                     PLAGFAPLGGIHMVTLATAFLGVWLVLASDNTARSGKRLLPIILIAALLAAGYTARQT
                     DFTRPDGSRSTVALLQGNIDQTLKWREDQVIPTIQKYYEQVGKTTADIVILPETAIPV
                     MRQNLPENILAKFAEQAQNNGSALAVGISQYTSDGNGYENAVINLTGYQENNQDGIPY
                     YAKNHLVPFGEYKPLPFLTTPLYKMMNMPLSDFRKGGGKQSALLMKNQKIAFNICYED
                     GFGDELIAAAKDATLLANASNMAWYGKSNAMYQHLQQSQARAMELGRYMVRATNTGAT
                     AIISPKGNIIAQAQPDTETVLEGHIKGYVGETPYMKTGSSWWLMGILTLAALILFIFR
                     NKEH"
     gene            3010..3873
                     /gene="rpoH"
                     /locus_tag="ACJJDE_001156"
     CDS             3010..3873
                     /gene="rpoH"
                     /locus_tag="ACJJDE_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HGG7541093.1"
                     /translation="MNNAFALPAIQSGNGSLEQYIHTVNSIPMLSQEEETRLAERRIK
                     GDLNAAKQLILSHLRVVVSIARGYDGYGLNQADLIQEGNIGLMKAVKRYKPGRGARLF
                     SFAVHWIKAEIHEFILRNWRLVRVATTKPQRKLFFNLRSMRKNLNALSPKEAQDIADD
                     LGVKLSEVLEMEQRMTGHDIAIMADNSDDEDSFAPIDWLADHDSEPSRQLSKQAHYAL
                     QTEGLQNALAQLDDRSRRIVESRWLQDDGGLTLHQLAAEYGVSAERIRQIEAKAMQKL
                     RGFLTEEAEAV"
     gene            4357..5241
                     /locus_tag="ACJJDE_001157"
     CDS             4357..5241
                     /locus_tag="ACJJDE_001157"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HGG7541094.1"
                     /translation="MSSGNIHIHSMTGFANAAAECGSKRINLDLRAVNHRFLDIQIRM
                     PDDLRYLESGIREKISSHIARGKVECKIQIQDAENGNQSLELNRDLVGQLAEINKDLR
                     KHYDLAKLGVADILRFPGVLASQRENADALAKVIADLTDSALKDFTAARRREGKKLGE
                     HLLQRLESMEEIIDALSELFPTLLETHKEKIRARLAEAVGSIDNDRLQQEFALFIQKS
                     DIDEEFSRLRTHIAEVRRIVTEHKGSSGKRLDFLMQELNREANTLGSKSIATECTQAS
                     VELKVLIEQMREQVQNIE"
     gene            complement(5325..5840)
                     /locus_tag="ACJJDE_001158"
     CDS             complement(5325..5840)
                     /locus_tag="ACJJDE_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7541095.1"
                     /translation="MMILKTAPLKRRFAAMLYEMLLVGAATCLAALFAGIAAIFLNPV
                     SIAVSALVTSILIMGSWWLYFRANWHGQGQTLAMRTWKIGLCDLNGIQPSLHLLRLRF
                     IWACIFIVFIPMLAYAGLRHFLGIPPKGAAGAALIWLILPWGFALLNPDRQFLYDFLA
                     GTRLVAVKGKP"
     gene            complement(5915..6334)
                     /locus_tag="ACJJDE_001159"
     CDS             complement(5915..6334)
                     /locus_tag="ACJJDE_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541096.1"
                     /translation="MDNKTKLRLGGLILLTTAVLSLIIVLIVDSWPLAILLAAVIVAA
                     AAGGFVWTSRRQQRQFIERLKKFDIDPEKGRINEANLRRMYHSGGQHQKDAITLICLS
                     QKCSVDEAHAMFKKRPTRQEINQMAAKQSRGQKRPHR"
     gene            complement(6455..7453)
                     /gene="holA"
                     /locus_tag="ACJJDE_001160"
     CDS             complement(6455..7453)
                     /gene="holA"
                     /locus_tag="ACJJDE_001160"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HGG7541097.1"
                     /translation="MAAHIGRIDTDAPLKPLYVIHGEEELLRIEALDALRAAAKKQGY
                     LNREVYTADNAFDWNELLQTAGSAGLFADLKLLELHIPNGKPGKTGGEALQDFAARLP
                     EDTVTLVLLPKLEKTQLQSKWFAALAAKGEVWEAKPVGAAALPQWIRGRLDKIGLGIG
                     ADALALFAERVEGNLLAARQEINKLGLLYPKGHTVNIDEAQTAVANVARFDAFQLAGA
                     WMKGDVPRVCRLLDGLREEGEEPVLLLWAVAEDVRTLIRLAAALKQGQSIQSVRNSLR
                     LWGEKQTLAPLAVKRISVVRLLDALKTCAQIDRIIKGAEDGDAWTVFKRLVVSLAE"
     gene            complement(7455..7934)
                     /gene="lptE"
                     /locus_tag="ACJJDE_001161"
     CDS             complement(7455..7934)
                     /gene="lptE"
                     /locus_tag="ACJJDE_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA];
                     GO_process: GO:0043165 - Gram-negative-bacterium-type cell
                     outer membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HGG7541098.1"
                     /translation="MNKLFLTAAVLMLGACGFHLKGADGISPPLTYRSWHIEGGQALQ
                     FPLETALYQASGRVDDAAGAQMTLRIDSVSQNKETYTVTRAAVINEYLLILTVEAQVL
                     KRGEPVGKPMTVSVRRVLAYADNEILGKQEEEAALWAEMRQDAAEQIVRRLTFLKAE"
     gene            complement(7986..8765)
                     /gene="pgeF"
                     /locus_tag="ACJJDE_001162"
     CDS             complement(7986..8765)
                     /gene="pgeF"
                     /locus_tag="ACJJDE_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HGG7541099.1"
                     /translation="MKTITETLNLAPKGKNFLTADWPAPANVKTLITTRNGGVSQGAY
                     QSLNLGTHVGDNPEAVRRNREIVQQQVGLPVAYLNQIHSTVVVNAAESLGGTPNADAS
                     VDDTGKAVCAVMTADCLPVLFCDRAGTAVAAAHAGWRGLAGGVLQNTIAAMKVPPVEM
                     MAYLGPAISADAFEVGQDVFDAFCTPMPEAAAAFEGIGGGKFLADLYALARLILKREG
                     VGGVYGGTHCTVLERDTFFSYRRDGATGRMASLIWLDGNAV"
     gene            8932..9045
                     /locus_tag="ACJJDE_001163"
                     /pseudo
     CDS             8932..9045
                     /locus_tag="ACJJDE_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            9324..10271
                     /locus_tag="ACJJDE_001164"
     CDS             9324..10271
                     /locus_tag="ACJJDE_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter family protein"
                     /protein_id="HGG7541100.1"
                     /translation="MNILSKISSFIGKTFSLWVALFAAAAFFAPDTFKWAGPYIPWLL
                     GIIMFGMGLTLKPSDFDILFKHPKAVIIGVIAQFAIMPATAWLLSKLLNLPAEIAVGV
                     ILVGCCPGGTASNVMTYLARGNVALSVAVTSVSTLISPLLTPAIFLMLAGEMLEIQAA
                     GMLMSIVKMVLLPIVLGLIVHKVLGSKTEKLTDALPLVSVAAIVLIIGAVVGASKGKI
                     MESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKTLAIEVGMQNSGLAAALAAAH
                     FAAAPVVAVPGALFSVWHNISGSLLATYWAAKAGKHKKP"
     gene            complement(10424..11548)
                     /gene="rluD"
                     /locus_tag="ACJJDE_001165"
     CDS             complement(10424..11548)
                     /gene="rluD"
                     /locus_tag="ACJJDE_001165"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HGG7541101.1"
                     /translation="MQNTSFDNESDYSDDSDFASASETENRIGLTVPLELAGGRLDAV
                     LAKLLPDYSRSRLTSWIKEGAVIVNDKPSQPKDKMIGGEQICVTVRPSEENLAFVPEP
                     MALDIVYEDDTVIVVNKPAGLVVHPAAGNWTGTLLNGLLAHCPELSQIPRAGIVHRLD
                     KETSGLMVVAKTLSAQNSLVRQLQERTVKRIYRAVANGIVPFDGKIETQIGRDPHNRL
                     KMAVVKFGGKPAVTHVKVLERYLAHSYIECSLETGRTHQIRVHMREANHPLAGDPVYG
                     NPRHPCGDTVKEAVKSLGARQALHAYRLSFTHPESGETVSFEAPIPDDIYHLLSVLRL
                     EAGLDSSLSNEEEWQDKFGADDDDDWNEDDYDVEVVYVRE"
     gene            11547..12350
                     /locus_tag="ACJJDE_001166"
     CDS             11547..12350
                     /locus_tag="ACJJDE_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HGG7541102.1"
                     /translation="MKKILLTVSLGLALSACATQGTVDKDAQITQDWSVEKLYAEAQD
                     ELNSSNYTRAVKLYEILESRFPTSRHARQSQLDTAYAYYKDDEKDKALAAIERFRRLH
                     PQHPNMDYALYLRGLVLFNEDQSFLNKLASQDWSDRDPKANREAYQAFAELVQRFPNS
                     KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAQKIIGSYQNTRYVEESL
                     AILELAYQKLGKPQLAADTRRVLETNFPKSPFLTHAWQPDDMPWWRYWH"
     gene            complement(12408..14627)
                     /locus_tag="ACJJDE_001167"
     CDS             complement(12408..14627)
                     /locus_tag="ACJJDE_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010357148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0009290 - DNA import into cell involved in
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HGG7541103.1"
                     /translation="MFRRWFLPCWVVGAAASFALPVVPHWLFWLAAFAVFAVFARRFA
                     FAGLMLCVLAGAAYGVFRTEAALSSQWWAEAVSGVPLTVEVADMPRSDGRRVQFAAKA
                     VDSGGRTFDLLLSDYKRREWAVGSRWRITARVHPVVGELNLRGLNREAWALSNGIGGA
                     GTVGADRVLLHGGSGWGIAVWRSRISRNWQQADADGGLSDGIGLMRALSVGEQSALRP
                     ELWQAFRPLGLTHLVSISGLHVTMVAVMFAWLAKRLLACSPRLPARPRAWVLAAGCAG
                     ALFYALLAGFSVPTQRSVLMLAAFAWAWRRGRLSAWATWWQALAAVLLFDPSAVLGVG
                     TWLSFGLVAALIWACSGRLHEGKRQTALRGQWAASVLSLVLLGYLFASLPLVSPLVNA
                     VAIPWFSWVLTPLALLGSVVPFAPLQQLGAFLAEYTLRFLVWLADVSPEFAVASAPLP
                     LLVLAVCAALLLLLPRGLGLRPWAVLLLAGFVFYRSPGVPENEVAVTVWDAGQGLSVS
                     VQTANHHLLFDTGTAAAAQMGIVPSLNASGIRYLDYLVLSHHDSDHDGGFQAVGKIPN
                     GGIYAGQPEFYEGARHCAEQRWQWDGVDFEFLMPSERKNIDDNGKSCVLRVVAGGAAL
                     LVTGDLDTKGEESLVGKYGGNLYSQVLVLGHHGSNTSSSGVFLNAVSPEYAVASSGYA
                     NAYKHPTEAVQNRVRAHGIKLLRTDLSGALQFGLGRGGVKAQRLRGYKFYWQKKPFE"
BASE COUNT         3573 a         4470 c         3662 g         3176 t
ORIGIN      
        1 gctgtaattg aatttccaca aaccgccgaa cactgccggc ggacgcgcga ccagcatcag
       61 gaacgccgca atcgccaagg cttccgccgc cccgtccaac acgccggcgg gagaaaccag
      121 cagcaaaggc attcccaaac atgcggacaa agtggtcgaa accacgctca ggaacaacag
      181 tgcgccaccc ggcaggaaca gactgcccat ccaatccacg ctaacgattc tcccttaaaa
      241 ttcattaaat taaaatcgaa agactgtaac acggcatttt tttcacgaaa ctttacttca
      301 cgtccgccac cgccttcaga cggcattttc ctgtttcatg ccgcctgaaa ccgcccaaat
      361 ccgcgttctc ctatataatg tcggactttg cgccgcattt caggattctt taatggcatt
      421 tgcctcacta tttaccctgc cggacgacat caccgccgtt ttggacgatg ttgccctgat
      481 gaccaaagcc gccgcaaaga aaaccgccgg catggtcggc gacgatttgg cacccaatgc
      541 caaccgggtt acgggcgtat cggcagaacg cgagttgccg attgtttggt cgatggcgaa
      601 aggttctttt tccaacaagc cggttttggt gcctgcggcc ctgctgcttt ccgccttcct
      661 gccgcaactc attacgccgc ttttgacggc aggcggcatt tatctgtgct ttgaaggcgt
      721 agaaaagctg ctgcacaagt ttctgcaccg acatgacgcg catgctcgta atggcggcaa
      781 tcggcatcgg catgactgtt ttggtgtacg gaatcgttgc cgtcatcgtc aaactcgacg
      841 acttaggcat gctgctgatg cgccgcccac aaaccttttc gcgcagtttg gggcaaatgc
      901 tgactgcctt tatgccttgc tttatgcgcg gtttgagcgt ggtcggcacg cttgccatgt
      961 ttcttatcgg cggcgtactg gtcgcccaca acctcggcct tctgcacgat ttcctgcacg
     1021 cgcaacactg ggacgctggc tgggcggagt acttcgccaa cctcgttgtc gggctgcttt
     1081 ccggttcgat tgcctgcgcc cccgccttgc cgctgatgaa tcgtttcggc aggcattgat
     1141 ttctttttca aataccgatg ccgtttgaaa gatgttcaga cggtatcttc cgaacagaca
     1201 gatgaatatg gtttccaaac tggacaaata ctggcagcac cccgccctct actggccttt
     1261 gctcatcctt tttgccgccg ccaccccctt taccttcgca ccctactacc acttttggct
     1321 gatgcccttg attttcggtg ccttcgtccg cctcatcgaa ctgcgtccgc gttttgctgt
     1381 ctcttccgcc tacctgttcg gcctgaccgc atacacgaca cagttctact ggatacacac
     1441 cgccctgcac gacgtttccg gcctgcccga cctctatgcc gtaccgctga ccttcctact
     1501 ccccgcctac cttgcccttt atccggcact gtgtttctgg ctgtggaaaa aatttaccct
     1561 gcctcggggc ataaaaatcg gtttggtact gcccatcctg tggacgctga ccgagtttgc
     1621 ccgcgagcgt ttcctgaccg gattcggctg gggcgcaatc ggctactccc aaatcacccc
     1681 ggacagcccg ctcgccggct ttgccccatt gggcggcatc cacatggtta cactggcaac
     1741 cgcctttctc ggtgtctggc tggttttggc gagtgataac accgcacgtt cgggcaaacg
     1801 cctgcttccg attatcctga ttgccgccct gcttgccgca ggctacaccg cccgacaaac
     1861 cgacttcacc cgccccgacg gcagccgcag caccgtcgcc ctgcttcaag gcaacatcga
     1921 ccaaaccctc aaatggcgtg aagaccaagt catcccgacc atacagaaat attacgaaca
     1981 ggtcggcaaa accactgccg acatcgtcat cctgcccgaa accgccatcc ccgttatgcg
     2041 ccaaaacctg ccggaaaaca tactggcaaa atttgccgaa caggcgcaaa acaacggcag
     2101 cgcgctcgcc gtcggcatca gccaatacac ttcggacggc aacggttacg aaaacgccgt
     2161 catcaacctg accggttatc aggaaaacaa tcaggacggc atcccctact acgccaaaaa
     2221 ccacctcgtc cccttcggcg aatacaaacc gctgcccttc ctgaccacgc cgctttacaa
     2281 aatgatgaat atgccccttt ccgacttccg caaaggcggc ggtaagcaat ccgccctgct
     2341 gatgaaaaac caaaaaatcg ccttcaacat ctgttacgaa gacggattcg gcgacgaact
     2401 gattgccgcc gccaaagatg ccaccctgct tgccaatgcc agcaatatgg cgtggtacgg
     2461 aaaatccaac gccatgtacc agcacctcca acaatcgcag gcacgggcta tggaactcgg
     2521 acgctatatg gtccgtgcca ccaacaccgg cgcaaccgcc atcatctccc ccaaaggcaa
     2581 catcatcgcc caagcccaac ccgatacgga aaccgtattg gaaggacaca tcaaaggcta
     2641 tgtcggcgaa acgccctata tgaaaaccgg cagttcatgg tggttgatgg gcatattgac
     2701 cctagccgca ctgattcttt tcatcttccg aaacaaagaa cactgatacc tgcacagccc
     2761 gtccggacgg gctgtctttt ttcaaaccgg ccgtttacat acaactacgt atgtaatata
     2821 attctgaaat cgaattgagt catcaggttt acaaaatcaa tcaaacctgc cttacaaaat
     2881 tttcctgtct ttcaaacctt agcgcatatc tcctgccaaa catacaaaat acaagccaag
     2941 cagtgatata ctgcatccca acacagcaaa ccgccgatac gcagtttcag ccgaaaggaa
     3001 atgccccaaa tgaataacgc tttcgcatta cccgccatcc aaagcggcaa cggcagcctc
     3061 gaacaataca tccacaccgt caacagcatc ccgatgctgt cccaggaaga agaaacccgc
     3121 ctcgccgaac gccggataaa gggcgacctc aacgccgcca aacaactcat cctgtcccac
     3181 ctgcgcgtcg tcgtttccat cgcgcgcggc tatgacggct acgggctgaa tcaggcagac
     3241 ctgattcagg aaggcaatat cggactgatg aaggcggtca aacgctacaa gcccggtaga
     3301 ggcgcgcgtc tgttttcatt tgccgtacac tggattaaag ccgaaatcca cgagtttatt
     3361 ttgagaaact ggcgtttggt tcgcgttgcc accaccaaac cgcaacgcaa gctgtttttc
     3421 aatttacgca gtatgcgtaa aaacctcaac gccctgtctc ccaaagaggc acaagacatc
     3481 gccgacgatt tgggtgtcaa actttccgaa gttctggaaa tggaacagcg catgacggga
     3541 cacgacatcg ccatcatggc agacaacagc gacgacgagg acagtttcgc ccccatcgac
     3601 tggcttgccg accacgattc cgaaccgagc cggcaactat cgaaacaggc gcattacgcc
     3661 ctgcaaacag aaggtttaca aaacgctttg gcgcaactgg atgacaggag ccgccgtatt
     3721 gtggaaagcc gctggcttca agacgacggc gggctgacgc tgcaccagct tgctgcagaa
     3781 tacggcgtct ctgccgagcg catccgccag attgaagcaa aagccatgca gaaactgcgt
     3841 ggtttcctga ccgaagaagc cgaagcggtt tgaaatatac gcaataaaat acccgacaaa
     3901 ttgttttgtc gggtatttta tttggtaaac atcaatgcgg tttgtgcgtc gtgctgtaca
     3961 cgattttatc cgtccacgcc gttgcaattg ccgaaatcaa aaagcagaca tgcaccagac
     4021 actgccgcat cagctgcttt tccgacagat tggcggaatt gatatagtgg attaacaaaa
     4081 atcaggacaa ggcggcgaag ccgcagacag tacaaatcgt acggaaccga ttcacttggt
     4141 gcttcagcac cttagagaat cgttctcttt gagctaaggc gaggcaacgc cgtactggtc
     4201 ttggttaatc cactatacat ttcccttcct tgcagcaaca aaagcgcgtg attccaatct
     4261 gccgctgcaa aatcttcaat ttttcacacc cgaaaacgct tgccgccata cagatgtgat
     4321 atattgattc cattttaacg ggcttcggag aacgacatga gcagcggaaa tatccacatc
     4381 cacagcatga ccggatttgc caacgcagcg gcagagtgcg gcagcaaacg catcaatctc
     4441 gacctgcgtg cggtcaacca ccgttttcta gatattcaaa tcaggatgcc cgacgatttg
     4501 cgctatttgg aaagcggtat ccgcgagaaa atttcatccc atatcgcacg cggcaaagtc
     4561 gaatgcaaaa tccaaattca agatgcggaa aacggcaatc agtctttgga actgaatcgc
     4621 gatctggtcg gacagcttgc cgaaatcaac aaagacctcc gcaagcatta tgatttggca
     4681 aaactgggcg ttgccgatat tttgcgcttt ccgggcgtat tggcaagtca aagggaaaat
     4741 gcggacgcat tggcaaaggt tattgccgat ttgaccgatt cggcactgaa ggactttacc
     4801 gccgcacgcc ggcgcgaagg gaaaaaattg ggcgagcacc tgttacaacg cctcgaaagc
     4861 atggaagaaa tcatagatgc attaagcgaa ctctttccta ccctgttgga aacacataaa
     4921 gaaaaaatcc gcgcccgcct tgccgaagcg gtcggcagca tcgacaacga ccgcctgcaa
     4981 caggaatttg ccctctttat ccaaaaatcc gacatcgacg aagagttcag ccgcctacgc
     5041 acccacattg ccgaagtgcg ccgtatcgtt accgaacaca aaggcagcag cggcaaacgg
     5101 ctggacttcc tgatgcagga attaaaccgc gaagccaaca ctttgggcag caaatccatc
     5161 gctaccgaat gcacccaagc ctcggtcgag ctgaaagtcc tgatcgaaca gatgcgcgaa
     5221 caggtgcaga atatcgaata atcggtttcc ccgataagca aatgccgtct gaaagccctt
     5281 tcagacggca ttttttcagt ttgaaacctt tgcggtataa aggcttaagg ctttcctttg
     5341 accgccacca atcttgttcc tgcaagaaaa tcatacagaa actgccgatc gggattcagc
     5401 agggcgaacc cccacggtaa aatcagccaa atcaatgccg cgccggccgc gcccttgggc
     5461 ggaatgccga ggaagtggcg caatccggca taagcaagca taggaatgaa gacgatgaat
     5521 atgcacgccc aaataaagcg caggcggagt aagtgtagag acggctgtat gccgttaagg
     5581 tcgcacaaac cgattttcca cgtcctcatc gccaaggtct gtccctgccc gtgccagttg
     5641 gcacggaaat aaagccacca tgatcccatt atcaggatac tcgttaccaa tgcagaaacc
     5701 gcaatagaaa cgggattcag aaaaatggcg gcaataccgg caaacaatgc tgccaaacag
     5761 gttgccgcac cgaccagcag catttcgtac agcatggcgg caaagcggcg tttgagcggg
     5821 gcggttttca gtatcatcat cttttcaatc ggaatatgcc gtctgaaacg ccaacaggct
     5881 tcagacggca ttcatgcaga tatgtctcat gtggttaacg gtgcggacgt ttctgaccgc
     5941 gcgactgttt tgccgccatt tgattgattt cctgacgtgt cgggcgtttt ttgaacatag
     6001 cgtgcgcctc gtccaccgaa catttttgcg acaggcagat cagggtaatc gcatctttct
     6061 ggtgttgtcc gccgctgtgg tacatacggc gcaggtttgc ctcgttgatt ctgccttttt
     6121 cgggatcgat gtcgaatttt ttcaggcgtt cgataaactg gcgttgctgt cggcgggatg
     6181 tccaaacaaa gccgcccgca gcggcggcga cgatgacggc ggcaagcagg atggcaagcg
     6241 gccaggaatc gacaatcaat acgataatga ggcttaaaac ggcggtggtc agtaaaatca
     6301 ggccgcccaa gcgcagtttg gtcttattgt ccatagggtt gatgttcctt tattgaggtg
     6361 gtcgtgccgt ctgaaatgtt ttcggacgga ttggtgaata cttttcagga ttaacggtat
     6421 tttacagtat tttcggattt tagggattac cgctttattc cgccagcgac acgacaagcc
     6481 gtttgaatac cgtccatgcg tcgccgtctt ccgcaccttt gatgattcgg tcgatttggg
     6541 cgcaggtttt gagcgcgtca agcaggcgga cgacggaaat ccgcttgacc gcaagcggcg
     6601 cgagcgtctg cttttcaccc caaagtctga gactgttgcg gacggattgg atgctctgcc
     6661 cctgcttcag ggcggcggca agccggatca gcgtccgcac gtcttcggca accgcccaca
     6721 gaagcagtac cggttcttcg ccttcttccc gcaatccgtc caagagcctg catacgcgcg
     6781 ggacatcgcc cttcatccac gcgcctgcca gttggaacgc gtcgaagcgg gcgacgttgg
     6841 caacggcggt ttgcgcctca tcgatattga cggtatgccc tttcggatac agcagcccga
     6901 gcttgttgat ttcctgacgt gccgccaaca gattgccttc cacgcgctca gcaaacagtg
     6961 ccaatgcgtc tgccccgata cccaaaccga ttttgtccag ccgtccgcgt atccattggg
     7021 gcaaagccgc cgcgccgacc ggtttggctt cccacacttc cccctttgcc gccaatgcgg
     7081 caaaccattt ggactggagc tgggttttct ccagtttggg cagtaaaacc agcgttaccg
     7141 tatcttccgg caggcgggcg gcaaaatcct gcaacgcctc gccgccggtt ttgccgggct
     7201 tgccgttagg gatatgcagt tccaacagct tcaaatcggc aaacagaccc gcactgcctg
     7261 cggtttgcag cagctcgttc caatcgaaag cattgtctgc cgtataaact tcccgattaa
     7321 ggtaaccttg tttcttcgcc gccgccctca atgcgtccaa tgcctcgata cgcaacagtt
     7381 cttcctcgcc gtggatgacg tacaggggtt tcaaaggcgc gtccgtatca atgcgtccga
     7441 tatgtgccgc cacgtcattc cgccttcaga aaggtcaggc ggcggacaat ctgttcggcg
     7501 gcatcctgcc gcatttccgc ccacaatgcc gcttcctctt cctgtttgcc caagatctcg
     7561 ttgtcggcat aagcaaggac gcggcggacg gacacggtca tcggtttgcc gaccggctcg
     7621 ccgcgtttca atacctgcgc ttcaaccgtc aatatcaaaa gatattcgtt gatgactgcc
     7681 gcacgggtaa cggtgtaggt ttccttgttt tgggaaacgc tgtctatacg cagggtcatc
     7741 tgcgcgccgg cagcatcgtc caccctgccc gaagcctgat acagcgcggt ttccaaagga
     7801 aactgcaatg cctgtccgcc ttcgatgtgc cagctccggt aggtcagcgg cggagaaatg
     7861 ccgtctgcac ctttcaggtg gaaaccgcac gcgcccagca tcagcactgc ggcagtaaga
     7921 aacagtttgt tcatggcttg cctttctcaa aagcacaaag tcggtagatt atatcagcgg
     7981 cgtgttcaga cggcattgcc gtccagccaa atcaggctcg ccatacgccc tgtcgctccg
     8041 tcgcggcggt aggaaaagaa agtgtcccgt tccaaaaccg tacaatgcgt gccgccatat
     8101 acgccgccca cgccttcacg cttcagaatc aggcgggcga gcgcgtaaag gtcggcaagg
     8161 aatttgccgc cgcctatgcc ttcaaatgcg gcggcggctt cgggcatggg cgtgcagaac
     8221 gcatcaaaca cgtcctgtcc gacttcaaac gcatccgcac tgatggcagg gccgagatac
     8281 gccatcattt cgacaggcgg aaccttcatc gcagcaatgg tgttttgcaa tacgccgccc
     8341 gccaaaccgc gccagcccgc gtgtgcggcg gcaaccgccg tacctgccct gtcgcaaaac
     8401 aaaacaggca gacagtctgc ggtcatcaca gcacagacgg ctttacccgt gtcgtccacg
     8461 gaagcgtccg cattgggtgt accgcctaac gattctgcag cgttgacgac gacggtgctg
     8521 tggatttgat tgaggtaggc aacgggcaat ccgacctgct gttgcacgat ttcgcggttg
     8581 cggcgcacgg cttcgggatt gtcgccgacg tgcgtaccga ggttcaaact ctgatacgca
     8641 ccttggctca cgccgccgtt gcgcgtggta atcagggttt tcacattggc gggcgcgggc
     8701 caatcggcgg tcaggaagtt tttgcctttc ggggcgagat ttagggtttc tgtgatggtt
     8761 ttcattggat attggaatag gtgtgtggcg gaaagggttg attaactgcc ttcggggcaa
     8821 atggatgttt gttttttcgt cattcccgca caggcgggaa ttcggagatt cgggattgtt
     8881 ttcaaacgtt cgggttcgga ttcttgccgg tgcgggaatg atgcccttat atatagtgga
     8941 ttaaatttaa atcaggacaa ggcgacgaag ccgcagacag tacaaatagt acggcaaggc
     9001 gaggcaacgc cgtactggtt taaatttaat ccactatact ttctccgagc tttatatgtt
     9061 tcaacagagg acggcacatc aagcaccgca ctgcgtgttg cccgaacgag actaccctac
     9121 gattagattc tatcgctata aacagacggg tttcaaccga aaaggaatgg ggataaagtc
     9181 catttccgac atctctcggg cgatgccgtc tgaaaaccaa tctccacttt cagacggcat
     9241 tgtttaggca cggtcatttt gcaaattaag gttaaggcgt gtatgcttgc cttcccttaa
     9301 aaacaaacac gcaacgcatt attatgaata tcctcagtaa aatcagcagc tttatcggaa
     9361 aaacattttc cctctgggtc gcgctctttg ccgccgccgc ttttttcgcg cccgacacct
     9421 tcaaatgggc ggggccttat attccttggc tgttgggcat tattatgttc ggtatgggtt
     9481 tgacgctcaa accttccgac ttcgatattt tgttcaaaca tcccaaagcc gtcatcatcg
     9541 gcgtaatcgc acaattcgcc attatgccgg caaccgcctg gctgctgtcc aaactgttga
     9601 acctgcctgc cgaaatcgcg gtcggcgtga ttttggtcgg ctgctgcccg ggcggtacgg
     9661 cttccaatgt gatgacctat ctggcgcgcg gcaatgtggc tttgtcggtt gccgttacgt
     9721 ctgtttccac cctgatttcc ccattgctga ctcccgccat cttcctgatg cttgccggtg
     9781 aaatgctgga aatccaagcg gccggtatgt tgatgtccat cgtcaaaatg gttttgctcc
     9841 ccattgtttt gggtttgatt gtccataagg ttttgggcag taaaaccgaa aagctgaccg
     9901 atgcgctgcc gctggtttcc gttgccgcca tcgtgctgat tatcggcgcg gttgttgggg
     9961 caagcaaagg caagattatg gaaagcggcc tgctgatttt tgcggttgtc gtactccaca
    10021 acggcatcgg ctacctgctc ggcttctttg ccgccaaatg gaccggcctg ccttatgatg
    10081 cacaaaaaac gctggccatc gaagtcggta tgcaaaactc gggtctggcc gccgcgctgg
    10141 ccgccgcaca ctttgccgct gcgccggtcg ttgccgttcc gggcgcattg ttcagcgtgt
    10201 ggcacaatat ctccggctcg ctgctggcaa cttattgggc ggccaaagcc ggtaaacata
    10261 aaaaacccta aacgcctttc atcataatgc cgtctgaacg gggcaaacaa aactggcggt
    10321 ttctgcccgg ccccttcaga cggcctttgt ttgaaatcgg cggggacgat tgcccggctg
    10381 ctccggttcg gctgcctgcg ttcgccccgc ctttcaagcc acctcactcc cttacataaa
    10441 ccacttcgac atcgtagtcg tcttcgttcc aatcgtcatc gtcgtccgcg ccgaatttgt
    10501 cctgccattc ctcttcattg ctcaaagacg aatccaaacc ggcttcaaga cggaggacag
    10561 acaataaatg atatatgtcg tccggaatcg gtgcctcaaa cgaaacggtt tcgccgcttt
    10621 ccggatgggt aaaactcaag cggtaggcgt gcaatgcctg acgcgcaccc aaacttttaa
    10681 cggcttcttt caccgtgtcg ccgcacggat ggcgcgggtt gccgtaaacc gggtcgccgg
    10741 caagcggatg gttggcctca cgcatatgga cgcggatttg gtgcgtcctg cctgtttcga
    10801 gcgagcattc gatatagctg tgggcaagat agcgttccaa cactttgacg tgggtaacgg
    10861 ctggtttgcc gccgaatttg acgactgcca ttttcaggcg gttgtgcgga tcgcgtccga
    10921 tttgggtttc gattttaccg tcaaagggga cgatgccgtt ggcgacggcg cggtagatgc
    10981 gtttgaccgt gcgttcttga agctgcctca cgagggaatt ttgcgccgac agggttttgg
    11041 caaccaccat cagcccgctg gtttctttgt ccaaacggtg tacgatgccc gcgcgcggaa
    11101 tttgggacag ctcggggcaa tgcgccaaca ggccgttgag cagcgtcccc gtccagttgc
    11161 ccgccgccgg atgcaccacc agtccggccg gtttgttgac gacgatgacg gtatcgtctt
    11221 cgtaaacaat atccaaagcc ataggctctg gaacaaacgc cagattttcc tcactcggac
    11281 ggacggttac acaaatttgc tcgccgccta tcattttgtc tttgggttgc gaaggtttat
    11341 cgtttacaat aaccgcgcct tctttaatcc atgatgtcag gcggctgcgc gagtagtcgg
    11401 gcagaagttt cgccaacacc gcatccaacc gcccgccggc aagctcgagc ggaacggtca
    11461 gaccgatacg gttttcagtt tcggaagctg acgcaaagtc tgaatcgtcg ctataatcgg
    11521 attcattatc aaaggaagta ttctgcatga aaaaaattct tttaacggtt tcattaggtt
    11581 tggcactgag tgcctgtgcc actcaaggta cggtcgataa agatgctcag attacccaag
    11641 attggagtgt ggagaagctc tatgccgaag cccaggacga attgaacagc agcaattata
    11701 cgcgggctgt caagttatac gaaatcttgg aatcgcgctt ccccaccagc cgccatgccc
    11761 ggcaatccca actggatacc gcatacgcct attataaaga cgatgaaaaa gacaaggctc
    11821 tggcggcaat cgaacgcttc cgccgcctcc atccgcagca tccgaatatg gattacgcgc
    11881 tgtatctgcg cggcttggtg ctgttcaacg aagaccagtc cttcttgaac aaactggcct
    11941 cgcaagactg gtccgaccgc gacccgaaag ccaaccgcga agcgtatcag gcctttgcgg
    12001 aactcgtcca acgcttcccg aacagcaaat acgccgccga tgcaaccgca cgcatggtca
    12061 aactggtcga tgcactgggc ggcaatgaaa tgtcggtggc gcgttactac atgaaacgcg
    12121 gcgcatatat cgccgccgcc aaccgcgccc aaaaaattat cggcagctat caaaatacac
    12181 gctatgtcga agaatcgctc gccatattgg aacttgccta ccaaaaactc ggcaaaccgc
    12241 agcttgccgc cgatacgcgc cgcgtgttgg aaaccaactt cccgaaaagc ccgtttttga
    12301 cgcacgcctg gcagcccgac gatatgccct ggtggcgtta ctggcattaa gcccatcttc
    12361 gtaatgccgt ctgaagccgt ttcagacggc attttatgtt tcaaacctca ttcaaacggt
    12421 tttttctgcc aatagaattt ataccctctc aaacgttgag ccttcacgcc gccgcgtccc
    12481 aagccgaatt gcagtgcgcc cgacaaatcg gtacgcagca gtttgatgcc gtgtgcgcgg
    12541 acacggttct gcaccgcttc ggtcggatgt ttgtaggcgt tggcataacc gcttgaagca
    12601 acggcatatt cgggcgagac ggcattgagg aacacgcccg acgaggacgt attgctgccg
    12661 tgatgtccca aaaccaaaac ctggctgtac aggttgcctc catacttgcc gaccaggctt
    12721 tcctcgccct tcgtatccaa atcgcccgtt accagcagtg ccgcaccgcc cgccacaaca
    12781 cgcaaaacac aacttttccc attatcatcg atgtttttgc gttcagacgg catcaaaaac
    12841 tcaaaatcca cgccgtccca ttgccaacgc tgttccgcac aatgccgcgc cccctcataa
    12901 aattccggct gcccggcata aatcccgccg ttcggtatct tgccgactgc ctgaaaaccg
    12961 ccgtcgtggt cgctgtcgtg atgcgacaaa accaaataat ccaaatacct gattcccgac
    13021 gcattcaagc tcggcacaat ccccatctgc gccgccgctg ccgttccggt gtcaaacaaa
    13081 agatgatgat ttgccgtctg aaccgacacc gacaaaccct gccccgcatc ccaaaccgta
    13141 accgcaacct cattttccgg cacgccgggt gaacggtaaa acacaaaccc tgccaacagc
    13201 aacaccgccc acggacgcaa acccaagccg cgcggcagca gcaacagcaa agcggcacac
    13261 accgccaaca ccaacagcgg caaaggtgcg gaggcaacgg caaactcggg cgacacatcg
    13321 gcaagccaca ccaaaaaccg caaagtatat tccgccaaaa atgcccccaa ctgttgcaaa
    13381 ggcgcaaacg gcacgaccga acccagcaac gccagcggcg tcaataccca agaaaaccac
    13441 ggaattgcca ccgcattgac caaagggctg accaaaggca gcgaagcaaa cagataaccg
    13501 agcaaaacca gcgacaacac cgaagccgcc cactgcccgc gcaaagcagt ttgccgtttt
    13561 ccctcgtgca aacgccccga gcacgcccat atcagggccg ccaccaaacc gaaagacagc
    13621 caagtcccca cacccaagac cgccgacggg tcgaacagca gcaccgccgc caacgcctgc
    13681 caccacgtcg cccacgccga caatcttccc ctgcgccaag cccacgcaaa cgccgccaac
    13741 atcaaaacgc tgcgctgcgt cggcacggaa aaaccggcaa gcagcgcgta aaacagcgcg
    13801 cctgcacacc ccgccgccaa aacccacgcg cgcggccggg caggaaggcg cggggaacag
    13861 gcaagcagcc gcttcgccag ccacgcaaac attaccgcca ccatcgtaac gtgcaaaccc
    13921 gaaatactga ccaaatgcgt cagccccaac ggccggaacg cctgccacaa ttcggggcgc
    13981 aatgccgact gttcgcccac gctcaacgcg cgcatcagcc cgatgccgtc tgaaagcccg
    14041 ccgtccgcat ccgcctgctg ccaattacgg ctgatgcggc tgcgccaaac cgcaatcccc
    14101 caaccgcttc cgccatgcag caaaaccctg tccgcaccga ccgtccccgc gccgcctatt
    14161 ccgttggata atgcccacgc ctcacggttc aaaccgcgca ggttcaactc cccgacgaca
    14221 gggtgcacac gtgccgttat ccgccatctg ctcccgaccg cccattcgcg ccgtttgtag
    14281 tccgacagca gcaaatcaaa cgtccgacca ccgctgtcca cagcctttgc cgcaaactgc
    14341 acacgccgcc cgtccgacct cggcatatcc gccacttcca ccgtcaaagg cacgcctgaa
    14401 acggcttctg cccaccattg ggaagacaat gccgcctccg tcctgaatac gccgtaagcc
    14461 gcgcccgcca acacgcacag catcagaccg gcaaacgcaa aacgccttgc aaacacagca
    14521 aaaaccgcaa aagccgccag ccaaaacagc caatgcggca cgaccggcag cgcgaacgaa
    14581 gccgccgcac cgacaaccca acacggcaaa aaccaacgac ggaacacgtc tccccacccc
    14641 agatatttca aaaataaacg gataataaag caaatccgaa aaaccgtcat aacaagattt
    14701 gaaaatgata tagtggttta aatttaaatc aggacaaggc gacgaagccg cagacagtac
    14761 aagcagtacg acaaggcgag gcaacgctgt actggttttt gttaaaccac tataagaatg
    14821 caaacgaaaa gcctcagtat tatccgagac aacggcaaac tttccatcgt cattcccgca
    14881 c
//
LOCUS       DBBZXU010000045        14823 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.045, whole genome shotgun sequence.
ACCESSION   DBBZXU010000045 DBBZXU010000000
VERSION     DBBZXU010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14823)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14823)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14823
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.045"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..311
                     /locus_tag="ACJJDE_001168"
     CDS             <1..311
                     /locus_tag="ACJJDE_001168"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541104.1"
                     /translation="DTTLVLVSVISSFFSSREYIDSRRQVLDTAFSYKSDGRMVLFKS
                     IKQESISFLSEDLKKDWMFHKVKTGEKDGYGSDEMLSVPRVYLEMMSRKTGVPYSSIL
                     "
     gene            complement(758..1120)
                     /locus_tag="ACJJDE_001169"
     CDS             complement(758..1120)
                     /locus_tag="ACJJDE_001169"
                     /inference="COORDINATES: protein motif:HMM:NF018933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HGG7541105.1"
                     /translation="MKAARRQLYYTFANRIAEQSRIICIKKLNLLNLQCIQIEVNKLH
                     QKIVAPSPLLHTLKEGVAKNGVHIEEIKANATSQSCYSCGRLNKRIGVAATRTNMVCE
                     GFGRHYDTDENASSNIRK"
     gene            1493..2920
                     /locus_tag="ACJJDE_001170"
     CDS             1493..2920
                     /locus_tag="ACJJDE_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7541106.1"
                     /translation="MKISRPLEFTLLQQEYMQHLTERMTQIAKLLNSSANNPDIDIPD
                     FLTEIKDYSEFSVTDENGTYLHWDKFRQIHTEDTRMKWRAVKESRKKIQKPIDFPFEH
                     QFWFCIPDSLQARLHLIDKSCGSSIGTSSLGGFGRSEQNRFLLKSLIMEEAITSAQLE
                     GAATTRKVAKDMLKSQRKPKTKDEIMIVNNYHLMKKAVELKNTPLSVEMILDLHRIAT
                     SNAIENKADPGQFRRDDEIFIADNDGNSLYQPPPHGQVHTLMEAVCTFANNTYDGVEN
                     PFIHPVVQAIILHFLIGYIHPFGDGNGRIARALFYWFMLKNSYWLFEYISISRLLKNA
                     PAQYAKSYLYAETDDSDLTYFIYYQCDIIKRAVADLEHYISDKQKHQQEFKAAIAQYT
                     EKIGKLNQRQIGILQKAVEESGKIFTALEIANQYGISLNTARSDLSKLGEYRFLVPFK
                     SGNALEYVAPQDLLERLEKKNSLLA"
     gene            3309..3773
                     /locus_tag="ACJJDE_001171"
     CDS             3309..3773
                     /locus_tag="ACJJDE_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541107.1"
                     /translation="MLHIPPTEPDRYVSSIVALNVHSSNGTGDWHSAAALNDDAYPQD
                     FYIYGKDQTRSTLHLLGNVGVIDGTNRFNEMGYYPENIPVWLADHPRACVDYLYTAVL
                     QTGSIGRVILDDWFPSDEDKQSVYDLLNQIEPHLNTQEWENLQLWKRKNPIM"
     gene            3900..5189
                     /locus_tag="ACJJDE_001172"
     CDS             3900..5189
                     /locus_tag="ACJJDE_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HipA family
                     toxin"
                     /protein_id="HGG7541108.1"
                     /translation="MMKSILTVSGNRMRKPRITHLDVWANDERIGTLEKGAMYRFTYD
                     NPGSPLLGLHYQDRGKVYISNNMPHIFAQYFPEGFLDAHITSKYAFHDAPFEDNEMLR
                     LAILGRETLGRIHVRCNDPLFNEWIDGLEMKNPRILTERDLLGINARQVFQQYMAEIF
                     HHGRFVSVSGIQQKMSLDAISRNTKQTASYIAKGFDASEYPCLAANEFLCMQTIKQAG
                     IPVAQTSLSEDSSVLLVRRFDVSEQEYFLGMEDFTSLRQYSAEDKYKGSYAAIAQIIR
                     QISGRPDEDLIHFFNQLAASCILKNGDAHLKNFSVLYHDEYDVRLAPTYDVLDTSIYR
                     VGTQGIFDAYDDTLALNLTNHGKKTYPSKNTLLDFAEKYCDLGREDASFMIDTIVQAK
                     EQVLVKYSDVLRENEWLAQKWHFIPDENEEGLPFTFR"
     gene            complement(5526..7313)
                     /locus_tag="ACJJDE_001173"
     CDS             complement(5526..7313)
                     /locus_tag="ACJJDE_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0046930 - pore complex [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006811 - monoatomic ion transport
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ShlB/FhaC/HecB family hemolysin
                     secretion/activation protein"
                     /protein_id="HGG7541109.1"
                     /translation="MKLPLSYLPNIRFLSWCCLLAGIIAPATLLASPNPAEIRMQQDI
                     QQRQREEQLRQTMQPESDVRLHQKNTGETVNQLMGDDSSQPCFAINEVVLEGEHHDRF
                     QFALKRALRETGFQAGKCLHAGNINQIMSLAQNALIGRGYTTTRILAAPQDLNSGKLQ
                     LTLIPSYLRSIRIDRSNDDQTHAGRIAAFQNKFPTRSNDLLNLRDLEQGLENLKRLPT
                     AEADLQIVPVEGEPNQSDVVVQWRQRLLPYRVSVGMDNSGSEATGKYQGNITFSADNP
                     FGLSDMFYVNYGRSIGGTPDEESFDGHRKEGGSNNYAVHYSAPFGKWTWAFNHNGYRY
                     HQAVSGLSEVYDYNGKSYNTDFGFNRLLYRDAKRKTYLGVKLWTRETKSYIDDAELTV
                     QRRKTAGWLAELSHKEYIGRSTADFKLKYKRGTGMKDALRAPEEAFGEGTSRMKIWTA
                     SADVNTPFQIGKQLFAYDTSVHAQWNKTPLTSQDKLAIGGHHTVRGFDGEMSLSAERG
                     WYWRNDLSWQFKPGHQLYLGADVGHVSGQSAKWLLGQTLAGTAIGIRGQIKLGGNLHY
                     DIFTGRALKKPEFFQSRKWASGFQVGYTF"
     gene            complement(7368..7826)
                     /locus_tag="ACJJDE_001174"
     CDS             complement(7368..7826)
                     /locus_tag="ACJJDE_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009404 - toxin metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-activating lysine-acyltransferase"
                     /protein_id="HGG7541110.1"
                     /translation="MPIISTLNILSPKLYPSEPYNESEALGAITWLWYQSPTHRQVPI
                     VEMMTYILPVLKNGQFALFCKGTQPIGYISWAYFDEVAQAHYLESDRHLRDNSDWNCG
                     DNIWLIQWFAPLGHSHQMRSAVRQLFPSTTVRALYHKGSDKGLRILTFKT"
     gene            complement(7992..8327)
                     /locus_tag="ACJJDE_001175"
     CDS             complement(7992..8327)
                     /locus_tag="ACJJDE_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003680143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541111.1"
                     /translation="MKQILFKYFMLITCVFGLSSCGYLLSFGQLMFDGSCADWNCSKP
                     TPRWRKAVDDCENRNLEIIKQRFGYKDYAEVIFSEVGQQIQIPYQCRQSNGGYDIRKD
                     KQYGHLFVQ"
     gene            complement(8308..>14823)
                     /locus_tag="ACJJDE_001176"
     CDS             complement(8308..>14823)
                     /locus_tag="ACJJDE_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7541112.1"
                     /translation="IDANGRLVNSGTMAAANAKDTDNTAEHKVNIRSQGVENSGTAVS
                     QQGTQIHSQSIQNTGTLLSSGEILIHNSGSLKNETSGTIEAARLAIDTDTLNNQGKLS
                     QTGSQKLHIDAQGKMDNRGRMGLQDTAPTASNGSSNQTGNSYNASFHSSTTTPTTATG
                     TGTATVSISNITAPTFADGTIRTHGALDNSGSIIANGQTDVSAQQGLNNAGQIDIHQL
                     NAKGSAFDNHNGTIISDAVHIQAGSLNNQNGNITTRQQLEIETDQLDNAHGKLLSAEI
                     ADLAVSGSLNNQNGEIATNQQLIIHDGQQSTAVIDNTNGTIQSGRDVAIQAKSLSNNG
                     TLAADNKLDIALQDDFYVERNIVAGNELSLSTRGSLKNSHTLQAGKRIRIKANNLDNA
                     AQGNIQSGGATDIGTQHNLTNRGLIDGQQTKIQAGQMNNIGTGRIYGDNIAIAATRLD
                     NQDENGTGAAIAARENLNLGIGQLNNRENSLIYSGNDMAVGGALDTNGQATGKAQRIH
                     NAGATIEAAGKMRLGVEKLHNTNEHLKTQLVETGREHIVDYEAFGRHELLREGTQHEL
                     GWSVYNDESDHLRTPDGAAHENWHKYDYEKVTQKTQVTQTAPAKIISGNDLTIDGKEV
                     FNTDSQIIAGGNLLVQTEKDGLHNEQTFGEKKVFSENGKLHSYWREKHKGRDSTGHSE
                     QNYTLPEEITRNISLGSFAYESHRKALSHHAPSQGTELPQSNGISLPYTSNSFTPLPS
                     SSLYIINPVNKGYLVETDPRFANYRQWLGSDYMLDSLKLDPNNLHKRLGDGYYEQRLI
                     NEQIAELTGHRRLDGYQNDEEQFKALMDNGATAARSMNLSVGIALSAEQVAQLTSDIV
                     WLVQKEVKLPDGGTQTVLVPQVYVRVKNGDIDGKGALLSGSNTQINVSGSLKNSGTIA
                     GRNALIINTDTLDNIGGRIHAQKSAVTATQDINNIGGILSVEQTLLLNAGNNINSQST
                     AASSQNTQGSSTYLDRMAGIYITGKEKGVLAAQAGKDINIIAGQISNQSEQGQTRLQA
                     GRDINLDTVQTGKHQATHFDADNHVIRGSTNEVGSSIQTKGDVTLLSGNNLNAKAAEV
                     SSANGTLAVSAKNDINISAGINTTHVDDASKHTGRSGGGNKLIITDKAQSHNETAQSS
                     TFDGRQVVLQAGNDANILGSNVISDNGTRIQAGNHVRIGTTQTQSQSETYHQTQKSGL
                     MSAGIGFTIGSKTNTQENQSQSNEHTGSTVGSLKGDTTIVAGKHYEQIGSTVSSPEGN
                     NIIHAQSIDIQAAHNKLNSNTTQTYEQKGLTVAFSSPVTDLAQQAIAVAQSSKQVGQS
                     KNGRVNAMAAANAGWQAYQTGKSAQNLANGTTNAKQVSISITYGEQQNRQTTQVQASQ
                     AQASQIQAGGKTTLIATGAAEQSNINIAGSDIAGKAGTILIADNDITLQSAEQSNTER
                     SQNKSTGWNAGAAVSFGQGGWSLGVTAGGNVGKGYGNGDSVTHRHSHIGDKGSQTLIQ
                     SGGDTTIKGAQVRGKGVQVNAKNLSIQSVQDRETYQSKQQNASAQVTVGYGFSASGDY
                     SQSKIRADHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSSQSAEDKGKNRFQTAT
                     LTTSDIQNYSQYQGKSFGLGASVAVSGKTLGQGAQNKPQNKHLTSVADKNGASSSVGY
                     GSDSDSQSSITKSGINTRNIHITDEAGQIRLTGKTAAQTKADIDTNVTTDTAERHSGS
                     LKNTFNKEAVQSELDLQREVTQEFDKTRQGVKQELYAVVDSKREQATKERLKNGGYDN
                     DKSRALNKEANELDEKIRWLDAGLGLVWGAGSSDMAWSMFATTQADRAVRSATAPKEM
                     WFHKKIIDEKTGKVSFDTRQIWSLNDLSKEELASIQDTNGKVITVSNPGIFNNREDSL
                     SNAAKQNRNSTNGSGVIAVMNPPTGKYKSDSNNKIKDSLWLSSSLVSELMYVGYDQLN
                     NKVFQGYLPKTNSEKLNQDIYREVQKMDNGWSVDTSNHSRGGITASVSLKDWVNNKEQ
                     NGIAPIRKARFYGTATNVKNDYADVLQKNGYTYTGADGKTYNSGAYSIVHDKDFVGNK
                     WIPFLLGNNETTKGACKGFCYSHSSYFAEVPEQYQRDENGNIKMENGKPVETENWEDY
                     TKKWGIPKTGADGKYINHAIPKLVNPNNPNGEKYETNPF"
BASE COUNT         3750 a         3174 c         3230 g         4669 t
ORIGIN      
        1 cggatacgac cttagttttg gtatccgtaa tatcatcatt tttttcgtca agggagtata
       61 tcgactctag aagacaggta ttagatactg ccttttctta caagagtgat ggtaggatgg
      121 ttctcttcaa gtcaatcaaa caggaaagta tttcttttct gtctgaagat ttgaaaaagg
      181 actggatgtt tcacaaggtt aaaactgggg aaaaagatgg atatggttca gatgaaatgc
      241 tgagcgtacc ccgtgtctat ttggaaatga tgtcgcggaa aacgggagtc ccctactcca
      301 gtattcttta aagtctaagt agaagacttc ttcgtcggtc tttttttgtt gtttggtttg
      361 catggagtaa aactgtacaa ctgttgaagc ataaaaccag caagaaggta aaaaagaaag
      421 aagcagttct ttggatttta gatgttaccg caattagttt cctttcctaa aatttgttta
      481 aattatttgc aatattaata taaacgagat attaatgatg agaaatcaaa aaggcatact
      541 aaatacaatt tgtacaaaat aattgcagta tttaaaaatg ttgattcgta tatgaaaagt
      601 taaaaatgcc aaaatgtaca gttgctaaac tgtaaaactg ctaaagcaac aaaacataaa
      661 aaggaatgca gggatgcaat cactacatct ttttattccg taagcattta tgactttacg
      721 gtcaactgct actctatgtg cctagctttt cagctcccta ttttcgaata ttggacgagg
      781 cattttcatc agtgtcgtaa tgccggccga aaccctcaca aaccatattg gttcttgtgg
      841 cagcaacacc tatccgtttg ttcaagcgac cacaagagta acatgattgg ctggtggcat
      901 tggctttaat ctcttcgata tgaactccat ttttagctac accttctttc agcgtatgca
      961 acagtgggga tggggcaact atcttctggt ggagtttgtt gacttcaatc tgtatgcact
     1021 gtaggttgag cagattcagt tttttgatac agattatccg gctttgttcg gcaattctgt
     1081 tggcgaacgt atagtagagc tgtcgtcttg ccgctttcaa tttgcggtag gtattttacc
     1141 attccatacg tagccgctcg gtacgtttga gccaaatggt atcttcgcca tttgtaccaa
     1201 ttggttttta cattaggctg tgttttagta atttattaat ttcaattatt tgcaagggaa
     1261 aagacaatta ttttccggtt aggaataaac ctatcctgtt gaatacctta aagccaaata
     1321 cgcctatcaa caccatatta aaacacagcc ttttttaata tagtagacac aatctttccc
     1381 tatttatgaa ggtgatcgct tctttctgat tcgtatttta atgcttccta tttttataaa
     1441 aattgactag aatagctcaa ttattaaaaa ttgcgcgatt ttggtattta tcatgaaaat
     1501 ttccagacct ctggaattta ccctgttgca acaggaatat atgcagcatc tgactgaaag
     1561 aatgactcaa attgccaagc tgctgaattc ttccgcaaac aatcctgata tagacattcc
     1621 cgattttctt actgaaatca aagattattc agaattttcc gtgacagatg aaaatggaac
     1681 ctacctgcat tgggacaaat tccgccagat tcacacggaa gatacgcgga tgaaatggcg
     1741 cgccgttaag gaaagccgca aaaaaatcca aaaaccaatt gatttcccgt ttgaacatca
     1801 gttttggttc tgcattcccg actctttgca ggcacggctt catttgattg acaaaagctg
     1861 cggcagttct atcggcacgt ctagcttggg tggcttcggc agaagcgagc aaaacagatt
     1921 cttgctcaag tctctgatta tggaagaagc gattacatcc gcccaactgg aaggtgcggc
     1981 taccacgcgt aaagtggcca aggatatgct caaatcgcag cgtaaaccca aaacaaaaga
     2041 cgaaatcatg atagtgaaca actatcactt gatgaaaaaa gcggtagaat tgaaaaatac
     2101 gccgttaagt gttgaaatga ttttggattt gcaccgcatt gctaccagca acgctattga
     2161 aaacaaggcc gaccccgggc aattcaggcg ggacgacgaa atctttatcg ccgataacga
     2221 cggcaacagc ctgtaccaac caccgccaca cgggcaggtt catacgctga tggaagcggt
     2281 atgcacgttt gccaacaaca cttatgacgg cgtggaaaat ccgtttatcc atccggttgt
     2341 ccaagctatc atcctgcatt tcctgattgg ctacatccat ccgttcggag atggcaacgg
     2401 gcggatagcg cgggctttgt tctattggtt tatgctcaaa aacagctact ggctgtttga
     2461 atacatatca atcagccgtc ttctgaaaaa cgctccggcc caatacgcca aatcctattt
     2521 gtatgcggaa actgacgatt cagatttaac ctatttcatc tattaccaat gcgatattat
     2581 caagcgggcg gttgccgatt tggagcacta catttccgac aaacaaaaac accaacagga
     2641 attcaaagca gcgattgccc aatatactga aaagatagga aagttgaacc aacggcaaat
     2701 tggtatcctg caaaaagcag tggaagaaag cggaaaaatc tttactgcac tagaaattgc
     2761 caaccaatac ggcatctccc tgaatactgc ccgtagcgat ttgagcaaac tgggagaata
     2821 tagattccta gtaccgttca aatcaggaaa tgctttagag tatgttgctc ctcaggattt
     2881 attggaaagg ttagaaaaaa aaaatagttt gctagcctaa aatgcagctt taaccgagtc
     2941 aaaatcaatg cagtccgcac ctttaaaaag aagctgcgga ctgcttgctt tttgctctac
     3001 aaatgatctt tgtagctgat ttaaccaaga ttgtagcaat tttgctttcc aagcaagcag
     3061 ggttagaaaa ttcgatactt ttaattattg gctgtgtttt aatatgatgt tgataggcgt
     3121 gtttggcttt aaggtattca acaggatagg tttattccta accggaaaat aattgtcttt
     3181 tcccttgcaa gtaattgaaa tcaacagatt actaaaacac agccttacat tattggggtg
     3241 actatcctgt aaaatatgtc ctaaaacgtg gaaaccactt ttgctctgct aaattttaag
     3301 gaatctttat gttacatata cccccaacgg aacctgatcg atatgttagc agtattgtag
     3361 ccttaaacgt gcatagttct aacggtacag gcgattggca cagtgcagca gcccttaatg
     3421 atgatgctta cccccaagat ttctatattt atggcaaaga tcaaacacgt agcacgttac
     3481 atttgcttgg taacgttggt gtgattgatg gaacaaaccg cttcaatgag atgggctatt
     3541 atcctgaaaa catcccagtt tggctcgcag atcacccccg tgcttgcgtg gattatcttt
     3601 acacagcagt gttacaaact ggctcaatcg gtcgggtgat tttagatgat tggtttccaa
     3661 gcgatgaaga caagcaatca gtttatgact tacttaacca aatcgaaccg cacttgaata
     3721 ctcaagaatg ggagaattta cagctatgga aacgcaaaaa cccaataatg taatgctaac
     3781 cgaacgagat aaaaggcacg agaagcggta ttactgaatt tcatccgcaa tacgccatgt
     3841 acaattaaat cagcagatgt gtctaaacgt accgctgttc ccgtttgaaa gaaattttca
     3901 tgatgaagtc tatcctcacc gtatccggaa atcgtatgcg taaacccaga atcacccatt
     3961 tggatgtttg ggcaaacgat gaaagaatcg gtactttgga aaagggggca atgtaccgtt
     4021 tcacatatga caaccccggt tctccattgt tgggtttgca ctatcaggat aggggtaaag
     4081 tatatatcag caacaacatg ccgcatatct ttgcacagta ttttccggaa ggctttttgg
     4141 atgcacacat cacaagcaaa tatgcttttc atgatgcgcc ttttgaagac aatgagatgc
     4201 tgcgcttggc aattctgggc agagagactt tgggtcggat acatgtgcgc tgtaatgacc
     4261 cgctttttaa tgaatggatt gacgggttgg agatgaaaaa tccaagaata ttgactgaac
     4321 gggatttgct gggcataaat gcccgacagg tttttcagca atatatggca gaaatcttcc
     4381 atcacggtcg tttcgtcagt gtatccggga tacagcagaa gatgtcctta gatgccatca
     4441 gcagaaatac caagcaaact gcctcatata ttgccaaagg ttttgatgca tccgaatatc
     4501 cttgcttggc tgccaatgaa tttttatgca tgcagaccat caaacaagca ggtattccgg
     4561 ttgcacaaac cagcctgtcg gaagattcat cagtcttatt ggtacgtcgg tttgatgtca
     4621 gtgaacagga gtatttctta ggcatggaag actttaccag tctgcgtcag tattcagcag
     4681 aagataaata taaaggcagt tatgcggcta ttgcacagat tatccgacag atatccggca
     4741 ggcccgatga agatttaatc cattttttta accagcttgc cgccagttgc atattgaaaa
     4801 acggggatgc acaccttaaa aatttttcag tactctatca tgacgaatac gatgtacgtc
     4861 ttgcacctac ctatgatgta ttggatacat caatatacag ggttggaaca caaggaattt
     4921 ttgatgctta tgacgatacg ctggcattaa acctgactaa ccacggtaag aaaacatatc
     4981 cttccaagaa tacattgttg gattttgctg agaaatattg cgatttggga agagaagatg
     5041 catcctttat gatagataca atcgttcaag ctaaagaaca ggttcttgtt aaatactcgg
     5101 atgtattgcg tgagaatgaa tggttggcgc agaagtggca ttttatcccg gatgaaaatg
     5161 aagaaggtct accgtttaca ttccggtagc tgccgggttt gaaccggctg tcagagatgg
     5221 ccggtcgact ttcaccctga aaatcacttc atcttatggt gtttgaaacc gagaaattag
     5281 aagaatcgta ttcggtagga gatatactag gaagattgga aaactggtaa atcattctat
     5341 tgattgagtt ggcggcctat atgtttaatg taggcaaacg agaaggaatc atgtatttca
     5401 tgattccttc ttaaattcct gtgtcaatct aagatcaaaa cacagccatc tcttaccata
     5461 atcatgatag gtgttttatt atgaaaagct atatctataa ttaccgttga tttgactatg
     5521 ccgttttaaa acgtatagcc tacctgaaaa ccgcttgccc atttccttga ttggaaaaat
     5581 tcgggctttt tcaatgcgcg gccggtaaat atatcgtaat gcaggttgcc gccaagcttt
     5641 atctgcccgc gtatcccaat tgctgtgccg gctagagttt ggcccaataa ccatttggcg
     5701 gattgtcctg aaacatgtcc tacatcagcc ccaagataaa gctgatggcc tggtttaaat
     5761 tgccagctca aatcgttgcg ccaataccat ccccgctcgg cagacaaact catttcaccg
     5821 tcgaagccac gtacggtgtg gtgtccgccg atagccagtt tgtcttgcga tgttagcggg
     5881 gttttgttcc attgtgcatg aacggatgtg tcataggcaa atagctgttt accgatttga
     5941 aaaggagtat ttacatcagc cgatgccgtc caaattttca tacgtgacgt gccttctcca
     6001 aaggcttctt caggcgcgcg cagagcatct ttcatgccgg tgccgcgttt atatttcaac
     6061 ttaaaatctg ccgtactgcg gccgatatat tctttgtggg aaagttctgc caaccaaccc
     6121 gcagttttac gccgttgtac agtcagttcg gcatcatcaa tgtaactttt tgtttccctc
     6181 gtccacagtt ttacaccaag ataggttttg cgtttggcat cacgatacaa caggcggttg
     6241 aagccgaaat cagtattgta actttttcca ttatagtcat agacttccga taatccggaa
     6301 accgcctgat ggtaacggta gccattgtga ttgaatgccc atgtccattt accgaaaggg
     6361 gctgaataat gtacggcgta attgtttgat ccgccttctt tgcgatggcc gtcaaaactt
     6421 tcctcgtcgg gcgtaccgcc aattgaacgt ccataattta catagaacat atcactcagt
     6481 ccaaaaggat tgtcggcaga gaaagtgata tttccttggt attttcctgt cgcctcacta
     6541 cccgaattat ccatccccac actcacacgg tagggcagca gacgttgccg ccattgcacc
     6601 acgacatcac tttggtttgg ttctccctct acgggaacga tttggagatc ggcttccgca
     6661 gtcgggagac gtttgagatt ttccagtcct tgttccaaat cacgcagatt caacagatcg
     6721 ttcgagcggg tgggaaattt gttctggaat gctgcaatac gtcctgcatg ggtttgatca
     6781 tcgttagacc gatcgattcg tatggagcgc agatagctcg gtatcagggt taattgaagc
     6841 ttgccactat tcaaatcctg tggcgcagcc aagatacggg tcgtggtata tcccctgccg
     6901 atcaaagcat tttgtgctaa ggacatgatt tgattaatgt tgcccgcatg cagacacttg
     6961 ccagcctgaa aacccgtttc gcgcaaggca cgttttaggg caaactgaaa ccgatcatgg
     7021 tgttcacctt ccaacaccac ttcgttaatg gcaaaacacg gttggctgct gtcatcgccc
     7081 atcaactgat taaccgtttc ccccgtgttt ttttgatgca aacgcacatc gctttcaggc
     7141 tgcatggttt ggcgcaactg ctcttcgcgt tggcgttgct gaatatcttg ctgcatacgg
     7201 atttcggcag ggttggggga agccaacaaa gtagcaggag cgatgatacc tgccaataag
     7261 cagcaccaag acaaaaagcg aatattaggc aaataggata aaggaagttt catggcatgg
     7321 tcgcaaaatc aataaaatca tcaatgggca ttcaatacac gattgcatca agttttaaaa
     7381 gttaaaattc tcaaaccctt atcgctccct ttatgataca aggcgcgtac tgtcgtacta
     7441 ggaaataact ggcgcacagc tgagcgcatt tgatgactgt gtcccaatgg cgcaaaccat
     7501 tgaatcagcc aaatattgtc gccacagttc caatcgctgt tgtcgcgcaa atggcggtca
     7561 gattctaaat aatgcgcctg cgccacttca tcaaaataag cccatgagat ataaccgatt
     7621 ggttgggtac ccttgcaaaa caaagcgaac tgcccgtttt ttaacacagg caatatatac
     7681 gtcatcatct ccacaatagg tacttggcga tgcgtaggcg actgatacca tagccaagtg
     7741 atggcaccga gtgcttcgct ttcgttatat ggctcactgg gatagagctt gggtgagagg
     7801 atgtttaggg ttgagatgat gggcatattt taagttaggg ttggtgttgg ttaaaacaaa
     7861 aaatggtttc agcctgaaat gaaacatttc acgttaaaac atagctttag catacgagac
     7921 tgaattgtag ggggcaataa gcaacgaccc taccattcaa caattctcgt taattgcaca
     7981 ggttacgctg gttattgcac aaacaaatgc ccatactgtt tatctttacg aatatcataa
     8041 ccaccattac tttgcctaca ttgataaggt atttgaattt gttgtccaac ttcactaaaa
     8101 atcacctctg cgtaatcttt atacccaaat ctctgtttaa taatctccaa gtttctattc
     8161 tcacagtcat caactgcctt tctccatctt ggcgtaggtt tagaacaatt ccaatctgca
     8221 caactgccat caaacattaa ctgcccaaat gataataaat aaccacaact gcttaatcca
     8281 aaaacacaag taattagcat aaaatattta aaaaggattt gtttcatatt tttctccatt
     8341 cggattattg ggattgacta attttggaat agcatgattt atatatttac catcagcacc
     8401 tgttttaggg attccccatt tttttgtgta atcttcccag ttttctgttt caacaggttt
     8461 cccattttcc attttaatat tcccattttc atctctttga tactgctcag gcacttccgc
     8521 aaaataactg ctatgcgaat agcaaaatcc cttacaagct ccttttgttg tctcattatt
     8581 tcctagcaag aaaggtatcc atttgttccc cacaaaatct ttatcatgca cgattgagta
     8641 ggctccgctg ttataagttt taccgtctgc acccgtatag gtatagccgt ttttctgtaa
     8701 aacatcggcg taatcattct tcacatttgt ggctgtacca tagaaacgtg cttttctgat
     8761 tggggcaatg ccattttgct ctttattgtt tacccaatct tttagggaaa cgcttgctgt
     8821 aattccccca cgactgtggt tactggtatc aacagaccag ccattatcca ttttttgaac
     8881 ctctcgataa atatcttgat tcagtttttc tgaattggtt ttgggtaaat agccttggaa
     8941 cactttatta tttaattggt cgtaaccgac atacatcagt tcagaaacaa gacttgaact
     9001 gagccataaa gaatctttta ttttgttatt agaatcagat ttatatttcc ctgttggagg
     9061 attcataact gcaataacac cactaccgtt tgtactatta cgattttgtt ttgctgcatt
     9121 gcttaatgaa tcttctcgat tattgaaaat accaggatta gacacagtaa taactttgcc
     9181 atttgtgtct tgaatgcttg ccagttcttc cttgcttaaa tcattcaatg accaaatttg
     9241 tctggtatca aaggatactt tacctgtttt ttcatctatt atcttcttat ggaaccacat
     9301 ttctttaggt gcagttgcag accttaccgc tctatcggct tgggttgtgg caaacatact
     9361 ccaagccata tcagaactcc ctgctcccca aacgagtcct aatcccgcat caagccaacg
     9421 aattttttca tctaattcat tagcttcctt atttaatgct ctagatttat cattgtcata
     9481 tccaccattt ttgagtctct cttttgtggc ttgctctcgt ttgctatcta ctactgcata
     9541 aagttcttgt ttcactcctt gtctagtttt atcaaactct tgggttactt ccctttgtaa
     9601 atccagttca ctttgcaccg cttctttgtt gaaggtgttc ttcaagctgc ccgaatgtcg
     9661 ttcggcggtg tctgtggtta cgtttgtatc aatatcggct ttggtttgtg ccgctgtttt
     9721 gcctgtcagc ctgatttgtc ccgcttcgtc ggtgatgtgt atgttgcggg tgttgatgcc
     9781 gcttttcgtg atgctgcttt gactgtcgct gtcgctgcca taacccactg atgaacttgc
     9841 gccgttttta tcggctacgc ttgtcaggtg tttgttttga ggtttatttt gtgcgccctg
     9901 tcccagtgtt ttgccgctta cggcaacgct ggcacccaat ccaaaacttt ttccttggta
     9961 ttggctgtaa ttttgaatgt cgctggtagt aagggtggcc gtctgaaagc ggtttttacc
    10021 cttgtcttct gcgctttggc tgctggtgat gatgccgcct ttgaggtctg tatggtttcc
    10081 gaccttgatt tgatagccgt cttctccggc ataaataccg ctttgctcgg ttactgaagc
    10141 atggtcggct cggattttgc tttgactgta atcgccactg gcactgaagc cataacctac
    10201 ggtcacttgt gcactggcgt tttgttgttt gctttgataa gtttctctat cttgtacgct
    10261 ttgaatactt aggtttttgg cattgacttg tacgcctttg ccgcgtactt gcgcgccttt
    10321 gatggtagtg tcgccaccgc tttggataag ggtttggctg cctttgtcgc caatatggct
    10381 atggcggtgg gttacgctat cgccattgcc gtagcctttg ccgacattgc cgcctgcggt
    10441 aacgcctaat gaccagcctc cttgtccgaa tgatacggca gcacctgcgt tccaacctgt
    10501 cgatttgttt tggctgcgtt cggtattgct ttgctcggct gattggagtg tgatgtcgtt
    10561 atcggcaatc aggattgtgc ctgctttgcc ggcaatatct gagcctgcga tgttgatatt
    10621 ggattgttct gctgcgcctg tggcgattaa tgtggtttta ccgcctgctt gaatttgact
    10681 cgcttgggct tggcttgctt gaacttgggt ggtttgtcgg ttttgctgtt cgccgtaggt
    10741 tatggagatg ctgacttgtt tggcattggt tgtaccattg gctaagtttt gtgcactctt
    10801 acctgtttga taggcttgcc agcctgcatt ggcagctgcc atggcattga cacgaccatt
    10861 tttgctttgt ccgacttgtt tgctgctttg tgcgacggca atcgcttgtt gtgccaaatc
    10921 ggtaacgggc gaactgaatg ccaccgttaa gcctttttgt tcataggttt gggtggtatt
    10981 actgtttaat ttgttgtgtg ccgcttgaat gtctatgctt tgggcatgga tgatattgtt
    11041 gccttctggg ctggaaacgg tactgccgat ttgttcgtag tgtttgcctg caacaatggt
    11101 ggtatcgcct ttcaagctgc ctacggtact gcctgtatgt tcgttgcttt gggattggtt
    11161 ttcttgtgtg tttgtcttgc tgccaatagt gaagccgata cctgcactca tcaatcctga
    11221 tttctgggtt tgatgatagg tttcgctttg gctttgagtt tgggttgtac caatgcgaac
    11281 atgattgcct gcttgaatcc gggtgccatt atcggaaata acattgctgc caaggatgtt
    11341 ggcatcgttt cctgcctgca atacaacttg cctgccgtca aaggtgctgc tttgagcggt
    11401 ttcgttgtgg ctctgggctt tgtcggtaat aatcaattta ttgccaccac cgcttctgcc
    11461 tgtgtgtttg gacgcatcat caacatgggt cgtgttgatg cctgcgctga tgttgatgtc
    11521 atttttggca gacacagcga gtgtaccgtt tgcgctgctg acttcggcag ctttggcatt
    11581 gaggttattc cctgacaata gggtaacatc gccttttgtt tgaatgctgc tgccgacttc
    11641 gttcgttgaa ccgcgaataa catggttatc ggcatcaaaa tgggttgctt gatgtttgcc
    11701 ggtttgtacc gtatctaggt taatgtcgcg ccctgcttgc agccgggttt gcccttgctc
    11761 tgattgattg ctgatttgac cggcaatgat gttgatgtct ttgcctgcct gcgctgctaa
    11821 aacacctttt tctttgcctg tgatataaat acctgccatt cggtctaggt aggtgctgct
    11881 gccttgtgta ttttgactgc tggcggcggt gctttggctg ttgatgttgt tgcctgcgtt
    11941 gagcaataat gtctgttcga cagaaagaat gccgccaata ttattgatgt cttgtgtggc
    12001 cgtaaccgct gatttttgcg catgaatacg cccaccgata ttgtctagcg tatcggtatt
    12061 gataataagc gcattgcgcc ctgcaatcgt gcctgagttt ttcaggctgc ctgaaacatt
    12121 gatttgtgta ttgctgcctg acaacaatgc acctttaccg tctatgtcgc cattcttaac
    12181 gcgtacataa acctgtggca ccaatacggt ttgtgtgccg ccatcaggaa gtttaacttc
    12241 tttttgtacc aaccaaacaa tatcgctggt cagttgcgct acttgctcgg cacttaatgc
    12301 aatgccaacg ctgagattca tggagcgtgc cgcagtcgcg ccattatcca ttaaggcttt
    12361 aaattgttct tcgtcgtttt gataaccgtc taaacgacga tgccctgtca gctctgcgat
    12421 ctgttcattg attaaacgtt gctcgtaata accatcaccc aaacgtttat gtaaattgtt
    12481 tgggtctagt ttgaggctgt ccagcatata gtcactaccc aaccattgac ggtagttggc
    12541 aaagcgtgga tcggtttcaa caagatagcc tttattgaca ggattgataa tatataagct
    12601 gctgctgggt aatggggtaa aagaattgga cgtatagggt agcgaaatac cgttgctttg
    12661 cggcaactca gtgccttggc tgggcgcatg atggcttaat gctttgcgat gcgattcata
    12721 ggcaaatgaa cccagtgaaa tgttgcgtgt gatttcctcc ggcaaagtgt aattttgttc
    12781 gctatgtccc gttgagtctc gtcctttatg tttctcacgc caatagctgt gtaatttgcc
    12841 attttcactg aatactttct tttcgccaaa ggtttgctcg ttatgcaaac cgtctttttc
    12901 tgtttgcaca agcaaattgc cgccggcgat gatttggcta tcggtattaa atacttcttt
    12961 accatcaatg gttaaatcat tacctgaaat gattttggct ggcgcagttt gggtaacttg
    13021 ggttttttgg gtgacttttt cataatcgta tttatgccaa ttttcatgcg ccgctccatc
    13081 aggggtgcgt aagtggtctg attcatcgtt atagacagac cagcctaatt catgttgtgt
    13141 gccttcccgc aataattcgt gtcgtccaaa tgcttcgtaa tcaacaatat gctcgcgccc
    13201 tgtttctacc aactgcgttt tcaaatgctc attggtattg tgcagctttt ctacgcctaa
    13261 acgcattttg ccggcggctt caatggttgc gccggcattg tgtatccttt gggctttgcc
    13321 tgtggcttgg ccattggtat ctaatgcgcc gccaaccgcc atatcgttac cgctgtaaat
    13381 cagactgttt tcacggttgt ttaattgtcc gatgcctaaa ttcaggtttt cacgtgccgc
    13441 aatggcggca cctgtaccgt tttcatcttg attgtctaag cgggtagccg caatagcgat
    13501 attgtcgcca taaatccgac ctgtaccgat attattcatt tgcccggctt ggattttggt
    13561 ttgttgtccg tcaatcaagc ctctattggt taaattgtgc tgcgtgccaa tgtctgttgc
    13621 accgccggat tgaatgttgc cttgtgctgc attatcaagg ttatttgctt taatccgaat
    13681 gcgttttcct gcttgcaaag tatgtgaatt tttcaggctg cctcgtgtac tgagcgacaa
    13741 ttcattgccc gccacgatat tgcgttctac ataaaaatca tcttgtaacg caatatccag
    13801 tttattatca gcggcaagtg tgccgttgtt ggataacgat tttgcctgaa tagcaacatc
    13861 acggcctgat tgtatcgtgc cattcgtatt atcaatgaca gcggtagatt gctgaccatc
    13921 gtgaataatc agttgttgat tggtcgctat ttcgccattt tgattgttca ggctgcctga
    13981 aacggctaaa tccgctattt ctgctgataa taacttgcca tgagcgttat ccagttgatc
    14041 ggtttcaatc tctaactgtt ggcgtgttgt gatgttgcca ttttgattat tcaggctgcc
    14101 ggcttgaatg tggaccgcat cactgataat tgttccattg tgattgtcaa acgccgaacc
    14161 ttttgcattt aactgatgaa tgtctatttg tcctgcatta tttaaacctt gttgcgcact
    14221 aacatctgtt tgaccattgg caataatact gcctgaatta tccagtgcac catgagtgcg
    14281 aattgtccca tcagcaaagg taggcgcagt tatgtttgat atagaaacgg ttgcagtacc
    14341 cgtacctgtt gccgttgttg gtgtggtagt ggatgaatgg aaagatgcat tgtaactatt
    14401 gccggtttga ttgcttgaac catttgacgc ggttggtgcg gtatcttgta aacccatgcg
    14461 gccacggtta tccattttgc cttgtgcatc aatatggagt ttttgtgaac ctgtttgaga
    14521 gagtttgcct tgattattaa gtgtgtcggt atcaatagcc aaacgagcgg cttcaatggt
    14581 gcctgatgtt tcatttttca ggctgcccga attgtgaatc aatatttcgc ctgaggacaa
    14641 taatgtgcca gtgttttgaa tcgactgact gtgaatttga gtgccttgtt gcgataccgc
    14701 cgtaccgctg ttttcaacgc cctgactgcg gatattgact ttgtgttccg ctgtattatc
    14761 cgtatctttc gcattggcgg cagccatcgt gccactattg actaaacggc catttgcatc
    14821 aat
//
LOCUS       DBBZXU010000046        14774 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.046, whole genome shotgun sequence.
ACCESSION   DBBZXU010000046 DBBZXU010000000
VERSION     DBBZXU010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14774
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.046"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            43..675
                     /locus_tag="ACJJDE_001177"
     CDS             43..675
                     /locus_tag="ACJJDE_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0009691 - cytokinin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HGG7541113.1"
                     /translation="MENTNRVPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHA
                     DYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPY
                     QDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVG
                     KAFWSGLAEWINAQLLARGLISEGAVSLFAISDDEDEIVAYLSEHGLQTA"
     gene            747..2117
                     /gene="purB"
                     /locus_tag="ACJJDE_001178"
     CDS             747..2117
                     /gene="purB"
                     /locus_tag="ACJJDE_001178"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0006188 - IMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HGG7541114.1"
                     /translation="MINPIASLSPLDGRYAQSVEALRPIFSEYGLMKARVKVELNWLK
                     ALAAEPKIAEVPPFSAETLAEIDTVIENFSLEDAAAVKAIEATTNHDVKAIEYWLKKR
                     FAEVPEVAAVSEFIHFACTSEDINNLSHALMLQEAREAVLLPKLAEIIEKLTAMAHDL
                     AAVPMMSRTHGQPATPTTLGKETANVVYRLQRQFKNLQVQEFLGKINGAVGNYNAHMV
                     AYPDVDWETHCRNFVEISLGLTFNPYTIQIEPHDYMAEFFQTLSRINTILIDFNRDVW
                     GYISLGYFKQKVKAGEVGSSTMPHKVNPIDFENSEGNLGMANAVLGFLSEKLPISRWQ
                     RDLTDSTVLRNMGVGVGYAVLGFAAHLRGLNKLEPNPAALAADLDATWELLAEPIQTV
                     MRRYGVANPYEKLKDLTRGKGGITPEVLKGFIGSLEIPVEAKAKLLELTPALYVGKAE
                     ALAKRI"
     gene            2197..4065
                     /locus_tag="ACJJDE_001179"
     CDS             2197..4065
                     /locus_tag="ACJJDE_001179"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HGG7541115.1"
                     /translation="MQAVRYRPEIDGLRAVAVLSVIIFHLNNRWLPGGFLGVDIFFVI
                     SGFLITGIILSEIQNGSFSFRDFYTRRIKRIYPAFIAAVSLASVIASQIFLYEDFNQM
                     RKTVEFSAVFLSNIYLGFQQGYFDLSADENPVLHIWSLAVEEQYYLLYPLLLIFCCKK
                     TKSLRVLRNISIILFLILTATSFLPSGFYTDILNQPNTYYLSTLRFPELLAGSLLAVY
                     GQTQNGRRQTANGKRQLLSSLCFGALLACLFVIDKHNPFIPGMTLLLPCLLTALLIRS
                     MQYGTLPTRILSASPIVFVGKISYSLYLYHWIFIAFAHYITGDKQLGLPAVSAVAALT
                     AGFSLLSYYLIEQPLRKRKMTFKKAFFCLYLAPSLILVGYNLYARGILKQEHLRPLPG
                     APLAAENHFPETVLTLGDSHAGHLRGFLDYVGSREGWKAKILSLDSECLVWVDEKLAD
                     NPLCRKYRDEVEKAEAVFIAQFYDLRMGGQPVPRFEAQSFLIPGFQARFRETVKRIAA
                     VKPVYVFANNTSISRSPLREEKLKRFAANQYLRPIQAMGDIGKSNQAVFDLIKDIPNV
                     HWVDAQKYLPKNTVEIYGRYLYGDQDHLTYFGSYYMGREFHKHERLLKSSRDGALQ"
     gene            complement(4160..4773)
                     /locus_tag="ACJJDE_001180"
                     /pseudo
     CDS             complement(4160..4773)
                     /locus_tag="ACJJDE_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272072.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
     gene            complement(4810..6960)
                     /gene="dinG"
                     /locus_tag="ACJJDE_001181"
     CDS             complement(4810..6960)
                     /gene="dinG"
                     /locus_tag="ACJJDE_001181"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HGG7541116.1"
                     /translation="MLTDLEKNAIRDHYQNIGKNLPGFRPRASQREMIAAVANAFSRT
                     LAREEGGEPPKREGESIAVIEGPTGVGKSLAYLLAGGIMAQTRGKRLIVSSATVALQE
                     QLVDRDLPFLVEKSGLELSFALAKGRGRYLCPYKLYQLTQSNAQQNLLGFEAPAVLWD
                     SKPKPEELKLLRDIADEFSARRFNGDRDTWPEKIDDAIWLKVTNDRHGCLKTACPNRP
                     ECPFYLARDVLETVDVVVANHDLLLADISMGGGVILPAPENSFYCIDEAHHLPKKALS
                     RFAAEHSWNIAVWTLEKLPQLTGKIAALTDKAELANLADEAAASLLDSLHEWQFHLAE
                     EPSLSMGPSENDRRTNSEPTWLWEDGKIPEGLETTVSNTAIAARSLLKHVVGLNDALS
                     AARREKEQDGALLDRLTGEFGIFIVRIEQISAVWDLLSTVPLEGEEPLAKWITRRADD
                     KNDYIFNASPISSASHLANSLWRRAAGAVLTSATLQSLGNFNLMLRQTGLQWLPETTT
                     LALKSPFDFEKQGELYIPPIYASPKDPEAHTAAVIEWLPKLISPTEAIGTLVLFSSRK
                     QMQDVALRLPGDYLPLLLVQGELPKAVLLQKHHRAIEEGKASIIFGLDSFAEGLDLPG
                     TACVQVIIAKLPFAMPDNPIEKTQNRWIEQRGGNPFIEITVPEAGIKLIQAVGRLIRT
                     EQDYGRVTILDNRIKTQRYGQQLLAGLPPFKRIG"
     gene            7117..7287
                     /locus_tag="ACJJDE_001182"
     CDS             7117..7287
                     /locus_tag="ACJJDE_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541117.1"
                     /translation="MLLYRLLGGAEIECGRCPVPPMTDWQHFLPAMGTVSAWVAVIWA
                     YLIIESEKNGRY"
     gene            complement(7355..8656)
                     /locus_tag="ACJJDE_001183"
     CDS             complement(7355..8656)
                     /locus_tag="ACJJDE_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding domain-containing protein"
                     /protein_id="HGG7541118.1"
                     /translation="MPSETARPLYADTCAAHTLVWFRQNLRIRDNAALCTAVAEGLPV
                     IGIWIDDAETDNPRRAAFYRQSAAELAQGLAGRGIPLYTAASPAELVRLAVRLNIRAV
                     IADESHTFADKLADNALWHELDKHGIALTFVNDRAVFGKTDLIPDGGTAHTDFDRYRE
                     VWLDRFSKQPPAGPDLFAAYRQPFPENLSAPPPAALSDGIFLPQNSGETAAWRQWRRF
                     LEQADSYSVLKDFPSRKHTSLMGAYLSAGCISPRLLARESLERRLNAWADNIIRRDFF
                     LQLALQHTDDDPSDGNPEHTLRLTLWQQGQTGIPIIDAAMRCLHKTGSLHPALRRLSA
                     DFFCHVLNLPRREGEIWFARQLTDFDAAINQGNWWLAASRHTCPDIAAASYRTDPDGT
                     FIKRHIPELAHLSADTVHTPWRFACSVDTHGYPAYPVAGIP"
     gene            complement(8646..9557)
                     /locus_tag="ACJJDE_001184"
     CDS             complement(8646..9557)
                     /locus_tag="ACJJDE_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7541119.1"
                     /translation="MDTLFSLKVFRQVVQSGGFTRAADALGISTAMASKHVSHLENTV
                     QAKLLHRNSRNLSLTEAGEEYYRQCSYALDTLDDAAQKAAGGTEKPQGLLRVTMPLWF
                     AGSQICNWLAEYRERYPEVTLELILDNRHVDLIAEGVDLALRVSQTLSPSLIARPLAE
                     IEFALLASPDFLRRNGVPETPEEVAGLPAVLPTYTNQQKLDLTRKSDGKKYRLELTPV
                     IRTDNTLMMREMIKAGACIGYQPLWAAEHDLRCGTLVRLLPGYAVPTDRLNAVYADRA
                     FLSAKVRSFIDFLNEKIASRKGCRNAV"
     gene            9665..10063
                     /locus_tag="ACJJDE_001185"
     CDS             9665..10063
                     /locus_tag="ACJJDE_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7541120.1"
                     /translation="MSDCCNRIQPVLLSVLRIVTAYLFLLHGTSKIFAFPIEMGSGSP
                     GGLLLLAGILEIVGGILLVLGLFARPAAFVLSGQMAVAYFMAHASGNALFPIANGGES
                     AVLFCFVFLYIAAAGGGAWSLDRLFFKRKA"
     gene            10112..10717
                     /locus_tag="ACJJDE_001186"
     CDS             10112..10717
                     /locus_tag="ACJJDE_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HGG7541121.1"
                     /translation="MTRQSLQQAAESRRSIYSLNKNLPVGKDEVVQIVEHAVLHTPSS
                     FNSQSARVVVLFGEEHDKVWQFVEDALRAVVPADSFEPTAQKLNLFKAGAATILFYED
                     QNVVKGLQEQFPAYAANFPVWADQANAMVQYAVWTTLAAVGVGANLQHYNPLPDAAIA
                     KAWNIPENWLLRAQMVIGGIEGAAGEKTFEPVAERLKVFGA"
     gene            10903..13014
                     /locus_tag="ACJJDE_001187"
                     /pseudo
     CDS             10903..13014
                     /locus_tag="ACJJDE_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
     gene            13212..13871
                     /locus_tag="ACJJDE_001188"
     CDS             13212..13871
                     /locus_tag="ACJJDE_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HGG7541122.1"
                     /translation="MKTAILIDGAFFIKRVRSLGLSQNPHDAKRIADLAFRYSMLHLK
                     DKINGTDQMDDLYRIFFYDCVPFEKKMHNPVSHRAIDFSKTPEAIFRCNLHTELKKKR
                     KLALRLGKLSDNTAWILKPQVMKNLLKNPSTQITENDVVLDVKQKGVDMRIGLDISSI
                     TLKKQADKIILFSGDSDFVPAAKLARREGIDFILDPMWNHVPPDLMEHIDGLKTKCPK
                     P"
     gene            14042..14737
                     /locus_tag="ACJJDE_001189"
     CDS             14042..14737
                     /locus_tag="ACJJDE_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7541123.1"
                     /translation="MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAP
                     LTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSEHIKTFKDDTYMRRE
                     HVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
                     DGKKVLAAFEASESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQ
                     LVDKVREEQKKPQ"
BASE COUNT         3336 a         3810 c         4099 g         3529 t
ORIGIN      
        1 tttttgacgg tgtacaatcg ctgtttttga acggaggatg gaatggagaa tacaaaccgt
       61 gtgccggagc aggcacgtta tgatgccgaa cgcaggcagg cagacgaagc attggcgggc
      121 gtgtttccgg cagtcagtat cttcggcagc gcgcgcacgc cgcagaatca tgcggattat
      181 gcgttcgcct gccgtctggc gcggcggctg tcggattcgg gcattgccgt catttcgggc
      241 ggcgggccgg ggattatgga ggcggcaaac aagggcgcgt ttgcagggaa gtcggtttcg
      301 gtggggctga acatcgtttt gccgcacgag cagaaaccga atccgtatca ggacatcgcc
      361 ttgcggtttt cccgttttgc cgaacgcaag gcggtgtttt tccgctattc ccaagcatat
      421 gtcgtgatgc cgggcggctt cgggacgctg gacgaattgt ttgaaatcct gaccttggtg
      481 cagacgggca aagtgccgcc gcgtccgatt gttttggtcg gaaaggcgtt ttggtcgggc
      541 ttggcggagt ggataaacgc gcagcttttg gcgcgcggtc tgatttccga aggggcggtc
      601 tctttgtttg ccatatcgga cgatgaagac gaaatcgttg cgtatctgtc ggaacacggg
      661 cttcagacgg catagcgtcc tgagagtgat gtataattgc aaacaattta acaatttttg
      721 atgtctttcc cgaacaggat gccgaaatga tcaaccccat cgcctcgctt tcccctttag
      781 atggccgtta tgcccaatcc gttgaagcat tgcgcccgat tttttccgaa tacggcctga
      841 tgaaagcgcg cgtcaaagtc gaattaaact ggctcaaagc cctcgccgcc gagccgaaga
      901 ttgccgaagt gccgcccttc agtgccgaaa cgcttgccga aatcgacacg gtgattgaaa
      961 acttttcatt ggaagacgcg gccgccgtca aagccatcga agccacgacc aatcatgatg
     1021 tcaaagccat tgaatattgg ctgaaaaaac gttttgccga agtgccggaa gtcgccgccg
     1081 tgagtgagtt catccacttc gcctgcacca gcgaagacat caacaacctg tcccacgctt
     1141 taatgctgca agaagcgcgt gaggctgttt tgctgccgaa gctggccgaa atcatcgaaa
     1201 aactgaccgc tatggcgcac gaccttgccg ccgtcccgat gatgagccgc acccacggcc
     1261 agcccgccac gccgaccact ttgggcaaag aaaccgccaa cgtcgtttac cgcctgcaac
     1321 gccagtttaa aaacctgcaa gtgcaagagt tcctcggcaa aatcaacggc gcggtcggca
     1381 actacaacgc ccatatggtt gcttatcccg atgtggattg ggaaacccac tgccgcaact
     1441 ttgtcgaaat cagcctcggt ctgaccttca acccctacac catccaaatc gaaccgcacg
     1501 actatatggc ggaattcttc caaaccctca gccgcatcaa cacgattctc atcgacttta
     1561 accgcgacgt ttggggttat atttcattgg gttacttcaa acaaaaagtc aaagcgggcg
     1621 aagtcggttc ttccaccatg ccgcacaaag tcaaccccat cgactttgaa aactccgaag
     1681 gaaacctcgg tatggcaaac gccgtattgg gctttttgtc cgaaaaactg ccgatttccc
     1741 gttggcagcg cgacctgacc gacagcaccg tcttacgcaa tatgggcgtg ggcgtgggct
     1801 atgccgtgtt gggtttcgcc gcacacctgc gcggtctgaa caagctcgaa cccaaccctg
     1861 ccgcgcttgc cgccgatttg gatgccactt gggaactgct cgccgagccg attcaaaccg
     1921 tgatgcgccg ttacggtgtc gccaatcctt acgaaaaact gaaagacctg acgcgcggca
     1981 aaggcggcat tacgcccgaa gtgctgaaag gctttatcgg atcgctggaa atccccgtcg
     2041 aagccaaagc aaaattgctt gagctgaccc ccgcactgta tgtgggcaag gctgaagcgt
     2101 tggcgaaacg gatttgagcg tttactgaaa ccgatgccgt ctgaacgcgc gttcagacgg
     2161 catttttaag ataacgggac atacggggcg atatttatgc aagctgtccg atacaggcct
     2221 gaaattgacg gattgcgggc cgttgccgtg ctatccgtca ttattttcca cctgaataac
     2281 cgctggctgc ccggagggtt tttgggggtg gacattttct ttgtcatctc gggattcctc
     2341 attaccggca tcattctttc tgaaatacag aacggttctt tttctttccg ggatttttat
     2401 acccgcagga ttaagcggat ttaccctgcc tttattgcgg ccgtgtcgct ggcttcggtg
     2461 attgcctctc aaatcttcct ttacgaagat ttcaaccaaa tgcggaaaac cgtggagttt
     2521 tctgcggttt tcttgtccaa tatttatctg gggtttcagc aggggtattt cgatttgagt
     2581 gccgacgaga accccgtact gcatatctgg tctttggcag tagaggaaca gtattacctc
     2641 ctgtatcctc ttttgctgat attttgctgc aaaaaaacaa aatcgctacg ggtgctgcgt
     2701 aacatcagca tcatcctatt tctgattttg actgccacat cgtttttgcc aagcgggttt
     2761 tataccgata ttctcaacca acccaatact tattaccttt cgacactgag gtttcccgag
     2821 ctgttggcag gttcgctgct ggcggtttac gggcaaacgc aaaacggcag acggcaaaca
     2881 gcaaatggaa aacggcagtt gctttcatca ctctgcttcg gcgcattgct tgcctgcctg
     2941 ttcgtgattg acaaacacaa tccgtttatc ccgggaatga ccctgctcct tccctgcctg
     3001 ctgacggcgc tgcttatccg gagtatgcaa tacgggacac ttccgacccg catcctgtcg
     3061 gcaagcccca tcgtatttgt cggcaaaatc tcttattccc tatacctgta ccattggatt
     3121 tttattgctt tcgcccatta cattacaggc gacaaacagc tcggactgcc tgccgtatcg
     3181 gcggttgccg cgttgacggc cggattttcc ctgttgagtt attatttgat tgaacagccg
     3241 cttagaaaac ggaagatgac cttcaaaaag gcatttttct gcctctatct cgccccgtcc
     3301 ctgatacttg tcggttacaa cctgtacgca agggggatat tgaaacagga acacctccgc
     3361 ccgttgcccg gcgcgcccct tgctgcggaa aatcattttc cggaaaccgt cctgaccctc
     3421 ggcgactcgc acgccggaca cctgcggggg tttctggatt atgtcggcag ccgggaaggg
     3481 tggaaagcca aaatcctgtc cctcgattcg gagtgtttgg tttgggtaga tgagaagctg
     3541 gcagacaacc cgttatgtcg aaaataccgg gatgaagttg aaaaagccga agccgttttc
     3601 attgcccaat tctatgattt gaggatgggc ggccagcccg tgccgagatt tgaagcgcaa
     3661 tccttcctaa tacccgggtt ccaagcccga ttcagggaaa ccgtcaaaag gatagccgcc
     3721 gtcaaacccg tctatgtttt tgcaaacaac acatcaatca gccgttcgcc cctgagggag
     3781 gaaaaattga aaagatttgc cgcaaaccaa tatctccgcc ccattcaggc tatgggcgac
     3841 atcggcaaga gcaatcaggc ggtctttgat ttgattaaag atattcccaa tgtgcattgg
     3901 gtggacgcac aaaaatacct gcccaaaaac acggtcgaaa tatacggccg ctatctttac
     3961 ggcgaccaag accacctgac ctatttcggt tcttattata tggggcggga atttcacaaa
     4021 cacgaacgcc tgcttaaatc ttctcgcgac ggcgcattgc agtagcctgc cttgccgtcc
     4081 gatatcgttt gtgccgccgt ttgcctttcg gggcggcggc ggtttttatt ttccttcccc
     4141 tgcgggaggg aattttgaat caaaacccca attgcctttc caagttttcc accagattgt
     4201 catccagttc caaagcctgc gacaggcggg cgaggaagac ggtttctttc cgcgacaaat
     4261 cggcacatac cagtcttgcc gccagatagg cctccgccgc caacgcctca tcgttgccga
     4321 cggcggcggc gatgtcttcg atgcttgcgg gcaggcggta ttcggcggcg agccatgcag
     4381 cagtttcggg gtctgtgccg ctttcctgtt cgatagtccg gcgttcggct tcgtctatca
     4441 tgccgtctga agcggcggtg gctatcatgg tgcgcaatac ggtgcggctg tatgtttctt
     4501 cggtttctcc ggcaggttgg aaatcgcttt gtgttacggt tgcccgccct ttgttttgct
     4561 gccacatctg atagccccgg taggcgaggt agcccaaagc ggcggtcgaa ccgattttgg
     4621 tgatggtttt gcggttttta ccgttcagca gcatggaggc gacaccggca accagcgcgc
     4681 ctccgccgaa tgaattgagc gggctgtcgg agaatgtgtt gccttttttt gaaccgtgct
     4741 taagacttgg ttgagcagtc gggtaaagtt catgaatttt tcctttctgt tgcgggaagg
     4801 gcggtatgtt taccctatcc ttttaaacgg cggcaggccg gccaataatt gttggccgta
     4861 ccgctgtgtt ttgatgcggt tgtcgaggat ggttacgcgg ccgtagtctt gttcggtgcg
     4921 gatgaggcgg ccgacggcct ggatgagttt gatgccggct tcggggacgg tgatttcaat
     4981 aaaaggattg ccgccgcgct gttctatcca gcggttttgg gttttttcga tggggttgtc
     5041 aggcatcgca aacggcagct tggcgatgat gacttgcacg caggcggtgc cgggcaggtc
     5101 gagtccttcg gcgaaactgt cgagtccgaa gatgatgctg gctttgcctt cttctatggc
     5161 ccggtggtgt ttttgcagga ggacggcttt gggtaattcg ccttgtacga gcaagagcgg
     5221 caggtagtct ccgggcaggc gcagggcgac atcctgcatt tgtttgcgcg aggaaaacaa
     5281 gacgagcgtg ccgatggctt cggtgggcga aataagcttg ggcagccatt cgatgacggc
     5341 ggcggtgtgg gcttcggggt ctttggggct ggcgtatatg ggggggatgt agagttcgcc
     5401 ctgtttttca aagtcaaagg ggcttttgag ggcgagggtg gtggtttcgg gcagccattg
     5461 cagcccggtt tggcgcagca tcaggttgaa gttgcccaag gattgcaggg tggcggaagt
     5521 caataccgcg cctgctgcac gccgccacag gctgttggca aggtgggatg cgctgctgat
     5581 ggggctggcg ttgaaaatgt agtcgttttt gtcgtcggca cggcgggtta tccattttgc
     5641 cagcggctct tcgccttcga gggggacggt ggagagcaaa tcccaaaccg cgctgatttg
     5701 ttcgatacgg acgatgaaga tgccgaactc gccggtcagg cggtcgagga gcgcgccgtc
     5761 ctgttctttt tcgcggcgcg cggcggaaag cgcatcgttc agcccgacaa cgtgtttgag
     5821 caggctgcgc gcagcaatgg ccgtattgga aacggtggtt tcgaggcctt cggggatttt
     5881 gccgtcttcc cacagccaag tcggttcgct gttggttcgt ctgtcgtttt cagacggccc
     5941 catacttaaa gacggctctt ccgccaaatg gaactgccat tcgtgcaggc tgtcgagcaa
     6001 ggatgcggcg gcttcgtcgg ccaggttggc aagttcggct ttatcggtaa gcgcggcaat
     6061 tttgccggtc agctgcggca gtttttccag cgtccaaacg gcaatattcc atgaatgttc
     6121 ggcggcaaaa cggctgaggg cttttttggg caggtggtgc gcttcgtcta tgcaatagaa
     6181 actgttttcg ggcgcaggca gaatcacgcc gccgcccata ctgatgtcgg caagcagaag
     6241 atcgtggttg gcaacgacga catcgacggt ttccaagaca tcgcgtgcta ggtaaaacgg
     6301 acattccgga cggttgggac aggcggtttt caggcagccg tggcggtcgt tggtcacttt
     6361 gagccaaatc gcgtcatcga ttttttccgg ccaagtgtcg cggtcgccgt tgaaccgtcg
     6421 ggcggaaaat tcgtcggcga tgtcgcgcag cagcttcaat tcttcgggct tgggtttgct
     6481 gtcccacaag acggcggggg cttcaaagcc gagcaggttt tgctgggcat tgctttgcgt
     6541 cagttgatag agtttgtagg ggcagagata gcggccgcgc cctttggcaa gcgcgaagct
     6601 cagttccaaa ccgctttttt cgaccaaaaa cggcaggtcg cggtctacca actgctcctg
     6661 caaggcaacc gttgcgctgc tcacaatcag ccgcttgccg cgcgtctgcg ccatgatgcc
     6721 gcccgccagc aggtaggcaa gcgatttgcc cacgccggtc ggcccttcga ttacggcgat
     6781 gctctcgccc tcgcgcttgg gcggctcgcc gccttcttcg cgcgccaacg tccgcgaaaa
     6841 agcgttggca accgccgcaa tcatttcccg ctgcgaagcg cgcggacgga aaccgggcag
     6901 gtttttgccg atgttttggt aatggtcgcg gatggcgttt ttttctaaat cggtgagcat
     6961 ggcgttttgt acggcggtag aagtgggctt attttaacat tgcacggaag cggtacaata
     7021 tcgttgtcgg aatggggggt gaggtgaatc gtgcggacgt ggttggtttt ttggttgcag
     7081 cgtttgaaat acccgttgtt gctttggatt gcggatatgt tgctgtaccg gttgttgggc
     7141 ggcgcggaaa tcgaatgcgg ccgttgccct gtgccgccga tgacggattg gcagcatttt
     7201 ttgccggcga tgggaacggt gtcggcttgg gtggcggtga tttgggcata tctgattatt
     7261 gaaagtgaaa aaaacggaag atattgagtc atccggacgc aatgccgtct gaaacggaag
     7321 ttcagacggc atttgtttta ggttgccgta ccgcttaggg aataccggcg acaggatagg
     7381 cgggatagcc gtgggtatcg accgaacagg caaaccgcca aggcgtgtgg acggtgtcgg
     7441 cggacaggtg ggcgagttcg ggaatgtgcc gtttgataaa agtaccgtcc gggtcggtac
     7501 ggtatgaggc ggcggcaatg tcggggcagg tgtgccgtga ggcggcaagc caccagttgc
     7561 cttggttgat tgccgcatcg aaatcggtca gctgtcgggc aaaccatatc tcgccttcgc
     7621 ggcgggggag gtttaaaacg tggcagaaaa aatccgcgct caagcgtctc agggcggggt
     7681 ggaggctgcc ggttttgtgc aaacagcgca tcgcggcatc gataatcgga atgccggtct
     7741 ggccctgctg ccaaagcgtc aggcgcaggg tgtgttcagg attgccgtct gaagggtcgt
     7801 catccgtgtg ctgcaaggca agttgaagga aaaaatcgcg gcggatgatg ttgtccgccc
     7861 acgcgttcag acggcgttcg aggctttccc gcgcgagcag gcgcggcgag atgcagccgg
     7921 cactcaaata cgcgcccatc agcgaagtgt gtttgcgcga ggggaaatcc tttaaaacgg
     7981 agtaggaatc cgcctgttcg agaaaccgcc gccactgccg ccaagccgcc gtttcgccgc
     8041 tgttttgcgg caggaagatg ccgtctgaaa gggcggcagg cggcggggcg gaaaggtttt
     8101 cggggaaggg ttggcggtat gccgcgaata ggtccggacc ggcggggggc tgcttggaaa
     8161 agcggtcgag ccatacttcg cggtagcggt cgaaatcggt gtgtgccgtg ccgccgtcgg
     8221 gtatcaggtc ggttttgccg aaaacggcgc ggtcattgac gaaggttaac gcgatgccgt
     8281 gtttgtccaa ttcatgccaa agggcgttgt cggcgagttt gtcggcaaaa gtatgggatt
     8341 cgtcggcgat gacggcgcgg atattgaggc ggacggcgag ccggacgagc tcggcaggcg
     8401 atgccgccgt gtagagcggg atgccgcgcc ctgcaagccc ttgggcgagt tcggcggcgg
     8461 attggcggta gaacgcggcg cggcgagggt tgtctgtttc ggcatcgtca atccaaatac
     8521 cgataacggg caaaccttcg gcaacggcgg tgcataaggc ggcgttgtcg cggatgcgga
     8581 ggttttggcg gaaccagacg agcgtgtgtg cggcgcacgt gtccgcataa agggggcggg
     8641 cggtttcaga cggcatttcg gcagcctttc ctgctggcga ttttttcgtt cagaaaatcg
     8701 atgaagctgc ggactttcgc gcttaagaat gccctgtctg cataaacggc attcagccgg
     8761 tcggtcggga cggcgtatcc gggcagcagc ctcaccagcg tgccgcagcg caaatcgtgt
     8821 tccgccgccc aaagcggctg ataaccgatg cacgcgcccg ccttaatcat ttcgcgcatc
     8881 atcagcgtgt tgtcggtacg gatgacgggg gtcagttcaa gccggtattt tttgccgtcc
     8941 gatttgcggg tgaggtcgag tttctgctgg ttggtgtagg tcggcaggac ggcgggcagc
     9001 cccgccactt cttccggcgt ttccggcacg ccgttgcgcc tcaggaagtc gggcgaggca
     9061 agcagggcaa attcgatttc cgccagtggg cgcgcaatca gtgacgggga cagggtttgg
     9121 gaaacgcgca acgccaaatc cacgccttcg gcaatcaaat cgacgtggcg gttgtccaaa
     9181 atcagttcta atgtcacttc gggataacgt tcgcggtatt ccgccagcca gttgcatatc
     9241 tggctgccgg caaaccacag tggcatcgtt acgcgcagca gcccctgcgg tttttccgtc
     9301 cccccggcgg ctttttgcgc ggcatcgtcg agcgtgtcga gcgcgtaact gcattgccgg
     9361 tagtattctt ccccggcttc ggtcaggctg aggttgcggc tgttgcggtg caggagtttg
     9421 gcttggacgg tgttttccaa gtggctgacg tgtttgcttg ccattgcggt ggagatgccg
     9481 agcgcgtcgg cggcgcgggt gaagccgccg ctttggacga cttggcggaa aaccttgagg
     9541 ctgaacaggg tgtccatatt ttcttgtgtg gaaaagttgt atcaataaaa gcagtatata
     9601 tttgaaaagg ggaaacatct atactctacc gcctgaaatg aagacaaata tcaaaggagc
     9661 ttttatgtcc gattgctgca accgtatcca accggttttg ctttctgttt tgcgtatcgt
     9721 aaccgcctac ctgtttttgt tgcacggtac gtcgaaaatc ttcgccttcc ccattgaaat
     9781 gggcagcggt tcgcccggcg ggctgttgct gcttgccggt attttagaaa ttgtcggcgg
     9841 cattttgctg gtgttgggcc tgtttgcgcg ccctgccgcg tttgttttgt ccggccagat
     9901 ggcggttgcc tattttatgg cgcacgcttc cggaaatgct ttgttcccga ttgccaacgg
     9961 cggcgagtcc gcagtgctgt tctgcttcgt attcctctat atcgcggcgg cgggcggcgg
    10021 agcatggtcg ctggacaggc tgtttttcaa gcgtaaagcc tgaatcggac tgcctaaagt
    10081 gtattttgtt gaatgttttt gaggaaaaga aatgacccgt caatctctgc aacaggctgc
    10141 cgaaagccgc cgttccattt attcgttaaa taaaaatctg cccgtcggca aagatgaagt
    10201 tgtccaaatc gtcgaacacg ccgttttgca cacaccttct tcgttcaatt cccaatctgc
    10261 ccgcgtggtc gtgctgtttg gcgaagagca tgataaggtg tggcaatttg tcgaagacgc
    10321 gctgcgtgcc gtcgtgcctg ccgacagttt tgaaccgacc gcgcaaaaat tgaacctgtt
    10381 taaggcgggt gcggcaacta ttttgtttta tgaagatcaa aatgttgtca aaggtttgca
    10441 ggagcagttc cctgcttatg ccgccaactt tcccgtttgg gcggaccagg cgaacgctat
    10501 ggtgcagtat gccgtttgga cgacacttgc cgcggtcggc gtaggtgcaa acctgcaaca
    10561 ttacaatccc ttgcccgatg cggcgattgc caaagcgtgg aatatccccg aaaactggtt
    10621 gttgcgcgca caaatggtta tcggcggtat tgaaggggcg gcaggtgaaa agacctttga
    10681 acccgttgca gaacgtttga aagtgttcgg cgcataattt cgcggtcaaa aaaatgccgt
    10741 ctgaaccctg ttcagacggc atttttcagt atcaggcggc gagttttccg cattctgaga
    10801 cctttgttta caaatatcat gttcaatata gttaaaagaa attattctca tttcctccgt
    10861 gaggcaatat aattcggttg ttttgttaaa ttgagtataa aaatgaaaat atcatttcat
    10921 ttagctttat tacccacgct gattattgct tccttccctg ttgctgccgc cgatacgcag
    10981 gacaatggtg aacattacac cgccactctg cccaccgttt ccgtggtcgg acagtccgac
    11041 accagcgtac tcaaaggcta catcaactac gacgaagccg ccgttacccg caacggacag
    11101 ctcatcaaag aaacgccgca aaccatcgat acgctcaata tccagaaaaa caaaaattac
    11161 ggtacgaacg atttgagttc catcctcgaa ggcaatgccg gcatcgacgc tgcctacgat
    11221 atgcgcggcg aaagcatttt cctgcgcggt tttcaagccg acgcatccga tatttaccgc
    11281 gacggcgtgc gcgaaagcgg acaagtgcgc cgcagtactg ccaacatcga gcgcgtggaa
    11341 atcctgaaag gcccgtcttc cgtgctttac ggccgcacca acggcggcgg cgtcatcaac
    11401 atggtcagca aatacgccaa cttcaaacaa agccgcaaca tcggtgcggt ttacggttag
    11461 tgggcaaacc gcagcctgaa tatggacatt aacgaagtgc tgaacaaaaa cgtcgccatc
    11521 cgtctcaccg gcgaagtcgg gcgcgccaat tcgttccgca gcggcataga cagcaaaaat
    11581 gtcatggttt cgcccagcat taccgtcaaa ctcgacaacg gcttgaagtg gacggggcaa
    11641 tacacctacg acaatgtgga gcgcacgccc gaccgcagtc cgaccaagtc cgtgtacgac
    11701 cgcttcggac tgccttaccg catggggttc gcccaccgga acgattttgt caaagacaag
    11761 ctgcaagttt ggcgttccga ccttgaatac gccttcaacg acaaatggcg tgcccaatgg
    11821 cagctcgccc accgcacggc ggcgcaggat tttgatcatt tctatgcagg cagcgaaaat
    11881 ggcaacttaa tcaaacgtaa ctacgcctgg cagcagactg acaacaaaac cctgtcgtcc
    11941 aatttcacgc taaacggcga ctacaccatc ggccgttttg aaaaccactt gaccgtaggc
    12001 atggattaca gccgcgaaca ccgcaacccg accttaggtt acaaccgcgc cttttccgcc
    12061 tccatcaacc cctacgaccg cgcaagctgg ccggcttcgg gcagattgca gcctattctg
    12121 acccaaaacc gccacaaagc cgactcctac ggcatctttg tgcaaaacat cttctccgcc
    12181 acgcccgatt tgaaattcgt cctcggcggc cgttacgaca aatacacctt taattccgaa
    12241 aacaaactca ccggcagcag ccgccaatac agcggacact cgttcagccc caacatcggc
    12301 gcagtgtgga acatcaatcc cgtccacaca ctttacgcct cgtataacaa aggcttcgcg
    12361 ccttatggcg gacgcggcgg ctatttgagc atcgatacgt tgtcttccgc cgtgttcaac
    12421 gccgaccccg agtacacccg ccaatacgaa accggcgtga aaagcagttg gctggacgac
    12481 cgcctcagca ctacgttgtc tgcctaccaa atcgaacgct tcaatatccg ctaccgcccc
    12541 gatccaaaaa acaaccctta tatttatgcg gttagcggca aacaccgttc gcgcggcgtg
    12601 gaattgtccg ccatcgggca aatcatccct aaaaaactct atctgcgcgg ttcgttgggc
    12661 gtgatgcagg cgaaagtcgt tgaagacaaa gaaaatcccg accgagtggg catccatttg
    12721 aataacacca gcaacgttac cggcaacctg tttttccgtt ataccccgac cgaaaacctc
    12781 tacggcgaaa tcggcgtaac cggtacaggc aaacgctacg gttacgactc aagaaataaa
    12841 gaagtgacta cgcttccagg ctttgcccga gttgatgcca tgcttggctg gaaccataaa
    12901 aatgttaacg ttacctttgc cgcagccaat ctgttcaatc aaaaatattg gcgttcggac
    12961 tctatgccgg gtaatccgcg cggctatact gcccgggtaa attaccgttt ctgatgaaat
    13021 caggcaaagg ccgtctgaaa atcctgataa tccgtaaatt cagcatacga actttttgac
    13081 aggctttatc tacatcagta taatccaaaa agaaatagtg cccttggcag tacgcattac
    13141 ccattaaatc atagcgggta tgccgatccc aagggctttt ttatatcttt gacaaatata
    13201 ggggaagcaa tatgaaaacc gccattttga ttgacggtgc attttttatt aagcgggtac
    13261 ggtcattagg cctgtctcaa aatccacacg atgcaaaaag aattgctgat ttggctttcc
    13321 gatattcgat gctgcatctg aaagataaaa tcaacggcac agatcaaatg gatgatttat
    13381 atagaatttt cttttacgac tgcgtgccgt ttgaaaagaa aatgcacaat cccgtatctc
    13441 atcgtgccat agatttttca aagactccgg aagccatatt tcgttgcaat ctgcataccg
    13501 aattgaagaa gaagcgtaaa ttagcgttac gtttaggcaa gctgtcggac aatacagcat
    13561 ggatattaaa accccaagtc atgaaaaatc ttctgaaaaa cccgtcaact caaattacgg
    13621 aaaacgatgt cgtgctcgat gttaaacaaa aaggtgtaga tatgcgtata ggcttggata
    13681 tttcatctat taccttaaaa aaacaagccg ataaaatcat cttgttttct ggtgattccg
    13741 attttgtccc agcagccaaa ttagccagac gggaaggtat cgattttatt cttgatccta
    13801 tgtggaatca tgtcccacct gacttaatgg aacacatcga cggattgaag acaaaatgtc
    13861 cgaaaccgta aattactaga acaaaggccg tctgaaaata aggctaatta tctaagccat
    13921 atttcagacg gcctttataa aggctgaaat aaaactaaac acattttttc actcaaatcg
    13981 aacacgcctt caataaaatg tcataaaatc cgcacattaa tctgacacac aagagatacc
    14041 tatgaaactg aaaaccttag ctttgacttc attgaccctg ttggcattgg ccgcttgtag
    14101 caaacaggct gaaaccagcg ttccggcaga cagcgtccaa agcagctcat ctgctccggc
    14161 agccccagcc ccattgaccg aaggcgtgaa ctacactgta ttgtccacgc ctatcccgca
    14221 acagcaggcc ggcaaagtcg aagtcttgga atttttcggc tacttctgcc cgcattgcgc
    14281 ccatcttgag ccggtcttga gcgagcacat caaaacgttt aaagacgata cctatatgcg
    14341 ccgggagcat gtcgtgtggg gtgatgaaat gaaacctttg gcacgtttgg cggccgcagt
    14401 ggaaatggcc ggtgaatcag ataaagccaa cagccatatt ttcgatgcga tggttaatca
    14461 aaaaatcaat ctggccgata ccgataccct gaaaaaatgg ctgtccgagc aaacagcgtt
    14521 tgacggcaaa aaagtattgg ctgcatttga ggcttctgaa agccaagcgc gtgcggctca
    14581 aatggaagag ttgaccaata aattccaaat cagcggcaca ccgactgtga tcgtcggcgg
    14641 caaataccaa gttgaattta aagactggca gtccggtatg accacgattg accagttggt
    14701 ggataaagta cgcgaagagc agaaaaagcc gcaataagtt gaggattgaa tgagtaaagg
    14761 ccgtttgaaa atag
//
LOCUS       DBBZXU010000047        14361 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.047, whole genome shotgun sequence.
ACCESSION   DBBZXU010000047 DBBZXU010000000
VERSION     DBBZXU010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14361
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.047"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..191
                     /locus_tag="ACJJDE_001190"
     CDS             <1..191
                     /locus_tag="ACJJDE_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541124.1"
                     /translation="PRVRHAPRSAMIGAVSFESAHRDECPRAVSIPIYRLFRIGCRRE
                     MTDGCRNDGRREAEEMID"
     gene            296..1609
                     /locus_tag="ACJJDE_001191"
     CDS             296..1609
                     /locus_tag="ACJJDE_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CitMHS family transporter"
                     /protein_id="HGG7541125.1"
                     /translation="MLTFIGLLIIGVIVWLLLTEKVSPIIALILVPLFGALLAGFDVS
                     QLKEFYSGGTKSVMQIVIMFMFSILFFGIMNDVGLFRPMIGGLIKLTRGNIVAVSVGT
                     VLVSVVAQLDGAGATTFLLVVPALLPLYKRLHMNPYLLFLLLTSSAGLINLLPWGGPT
                     GRVASVLGADVGELYKPLLTVQIIGVVFILALSLLLGVREKRRIVRELGALPAVADLI
                     KPVPLSEEEQKLARPKLFWWNVLLFLAAMSLLFSGIFPPGYVFMLAATAALLLNYRSP
                     QEQMERIYAHAGGAVMMASIILAAGTFLGILKGAGMLDAISKDIVHILPDALLPYLHI
                     AIGVLGIPLELVLSTDAYYFGLFPIVEQITSQAGVAPEAAGYAMLIGSIVGTFVTPLS
                     PALWMGLGLAKLSMGKHIRYSFFWAWGLSLAILASSIAAGIVPLP"
     gene            1832..1989
                     /locus_tag="ACJJDE_001192"
                     /pseudo
     CDS             1832..1989
                     /locus_tag="ACJJDE_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003824008.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2002..3252
                     /locus_tag="ACJJDE_001193"
     CDS             2002..3252
                     /locus_tag="ACJJDE_001193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7541126.1"
                     /translation="MFVPLAMLAGMFSYYETFHETEALQDDLLRQAALYVAPDSKPET
                     LPEGDGDTRILVQMPQQEDPVVSLPAHLADGLHTLQADGDDDYYRVYIRTTERGRIAV
                     MQESEYREDLAADAARQSVLPLLAALPLMILLTVWITHKAMRPVRKLSQSLEQRRIND
                     LSALSVDNIPSEIRGFVTAINLLLKRADEDIRHRQRFVADAAHELRTPMTALSLQAER
                     LNNMSLPPDAARQSAVLQQSIRRNKHLLEQLLALARSQSDETPLAKTTFGLQSRFRQV
                     LQELMPLALEKRQDIGVAVGGDVEIFADETEIYTLVKTFVDNAIRYTPSEGRIDLGFT
                     DEGKYLAVWVEDNGNGIPESERVRVLDPFYRILGTEQQGTGLGLSIADTLAKKYGGYL
                     ELTDSRRFGHGLLIRALLDKETLK"
     gene            complement(3287..4780)
                     /gene="rng"
                     /locus_tag="ACJJDE_001194"
     CDS             complement(3287..4780)
                     /gene="rng"
                     /locus_tag="ACJJDE_001194"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HGG7541127.1"
                     /translation="MLSGLPIPKDIARPPETILVNITPQETRVAVLEENNICELHIER
                     NSEHSLVGNIYLGVVRRVLPGMQSAFIDIGLERAAFLHIVDVLEQRRNPEETQRIEHM
                     LFEGQSVLVQVIKDPINTKGARLSTQISLAGRFLVHLPQEDHIGVSQRIEDDAERSSL
                     RERLDKLLPENACRGYIIRTNAENATDEQLQSDIDYLTKVWEHIQEQAKIRPPETLLY
                     QDLPLSLRVLRDMVGCDTQKILVDSTVNHGRMTRFAEQYVHGALGRIELFKGERPLFE
                     THNVEQEISRALQPRVNLNFGSYLIIESTEAMTTIDVNTGGFVGARNFDETIFRTNLE
                     ACHTIARELRLRNLGGIIIIDFIDMAQESHREAVLQELAKALAFDRTRVTLHGFTSLG
                     LVELTRKRSRENLNQVLCEPCPSCQGRGRLKTPQTVCYEIQREIVREARRYDAESFRI
                     LAAPNVIDLFLDEESQSLAMLIDFIGKPISLAVETAYTQEQYDIVLM"
     gene            4994..5251
                     /gene="grxC"
                     /locus_tag="ACJJDE_001195"
     CDS             4994..5251
                     /gene="grxC"
                     /locus_tag="ACJJDE_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HGG7541128.1"
                     /translation="MQTVTMYTGPFCPYCAMAKRLLHTAGVGHIDEIRVDASPEAFAE
                     MQQLSGQRSVPQIFIGETHVGGFTDLYRLQQEGGLDGLLNP"
     gene            5272..5715
                     /gene="secB"
                     /locus_tag="ACJJDE_001196"
     CDS             5272..5715
                     /gene="secB"
                     /locus_tag="ACJJDE_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HGG7541129.1"
                     /translation="MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVST
                     GSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACP
                     NILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA"
     gene            5801..7843
                     /gene="recG"
                     /locus_tag="ACJJDE_001197"
     CDS             5801..7843
                     /gene="recG"
                     /locus_tag="ACJJDE_001197"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HGG7541130.1"
                     /translation="MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETH
                     IMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQIADGSGSVLFLRFIHFYASHQKQ
                     TAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
                     QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHSPPPSFTIHQLSDGTLPAWQRLKF
                     DELLAQQLSMRLARQKRIGGTAAALGGDGTLTQALRQALPFALTDAQEKVVSEICRDM
                     AQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEILAEQHFIKFKQWLE
                     PLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAIGTHALFSDGVTFHNLGLTIVDEQH
                     RFGVAQRLALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDKLPPGRTPIKTRL
                     VNNVRRAEVEGFVLNTCRKGRQAYWVCPLIEESETLQLQTAAETLARLQTALPELNIG
                     LVHGRMKAAEKAEVMARFSSGELNVLVATTVIEVGVDVPNAALMVIEHAERMGLAQLH
                     QLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLG
                     ARQSGVPMLRFAKLEEDLHLLEQAREIAPILIEQNPEIVEAHLARWLSGREGYLGV"
     gene            8353..8478
                     /locus_tag="ACJJDE_001198"
                     /pseudo
     CDS             8353..8478
                     /locus_tag="ACJJDE_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8628..9671)
                     /gene="argC"
                     /locus_tag="ACJJDE_001199"
     CDS             complement(8628..9671)
                     /gene="argC"
                     /locus_tag="ACJJDE_001199"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0070401 - NADP+ binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HGG7541131.1"
                     /translation="MSKKIKVGIVGATGYTGVELLRLLAAHPDVEVAAVTSRSEAGTA
                     VADYFPSLRGVYGLAFQTPDEAGLEQCDIVFFATPNGIAMKDAPRLIEQGVRVIDLSA
                     DFRIRDIPTWEHWYGMTHAAPDLVSQAVYGLSELNREAVAQARLVANPGCYPTCVSLP
                     LVPLLRQCRLKPGMPLIADCKSGVSGAGRKGNVGSLLCEVGDNFKAYGIAGHRHLPEI
                     RQTIAGLQDGIAEGFVFTPHLAPMIRGMHATVYLHLSDGICPETILRDYYRDSLFVDI
                     LPAGSTPETRSVRGANLCRISIQQAAQSDVWVVLSVIDNLVKGAAGQAVQNMNIMFGL
                     KETHGLDAIPLLP"
     gene            complement(9668..9949)
                     /locus_tag="ACJJDE_001200"
     CDS             complement(9668..9949)
                     /locus_tag="ACJJDE_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541132.1"
                     /translation="MKTLVLLLLSFSTTTAFAAYGLGLGQAPKYPADFRAYGYVYSGR
                     QGWVLKTEADAIKLDTLFKRFVYRPSTANQNPVGQRSDGIPANHTKEKP"
     gene            10317..11471
                     /locus_tag="ACJJDE_001201"
     CDS             10317..11471
                     /locus_tag="ACJJDE_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HGG7541133.1"
                     /translation="MSIHLDFGISPKTFRQTYLYQKPKLFKGAARNLEAASWKDINEI
                     YQRADPTAPLFYLRKKGAIVPKEEYVESFDALGKTRYRFIKSVIYEHMKNGASLVYNH
                     INNEPFSDHISRQVARFAGAHTIVSGYLAFGSDESYKNHWDTRDVYAIQLFGKKRWQL
                     TAPDFPMPLYMQQTKDTDISIPEHIDMDIILEAGDVLYIPRGWWHRPIPLGCETFHLA
                     VGTFPPNGYNYLEWLMKKFPTIESLRHSFSDWEQDRTRINDTAAQIAAMIADPVNYEA
                     FSEDFLGKERTDTAFHLEQFANPNATPLSDDVRLRLNANNLDTLEKGYLIGNGMKISV
                     DELGKKVLEHIGKNEPLLLKNLLVNFNQGKHEEVRKLIYQLIELDFLELL"
     gene            11480..11686
                     /locus_tag="ACJJDE_001202"
     CDS             11480..11686
                     /locus_tag="ACJJDE_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541134.1"
                     /translation="MKNWKQFTFFVILVIACYQVLYFLSDMFLLDYINKYSWNLNFIQ
                     GTLNFFSIYLPYVFVSRIFRNTNQ"
     gene            11891..12151
                     /locus_tag="ACJJDE_001203"
     CDS             11891..12151
                     /locus_tag="ACJJDE_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HGG7541135.1"
                     /translation="MERKNNIIELSIENLELIYGGGLGERILEGGANGAQIGGSIGAG
                     IGLGVGIVSGGIPAGPAIILGGTVGAAVGAVTGMGVAAYEYY"
     gene            12311..12937
                     /locus_tag="ACJJDE_001204"
     CDS             12311..12937
                     /locus_tag="ACJJDE_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein"
                     /protein_id="HGG7541136.1"
                     /translation="MNRPKQPFFRPEVTVARQTSLTGKVILTRPLSFSLWTTFASISA
                     LLIILFLIFGNYTRKTTVEGQILPASGVIRVYAPDTGTITTKFVEDGEKVKAGDKLFA
                     LSTSRFGAGGSVQQQLKTEAVLKKTLAEQELGRLKLIHENETRSLKATVERLENQKLH
                     ILQQIDGQKRRIRLAEDQWQKRHWADRNCRDWAWYPPIWRRAANLFIL"
     gene            12841..13089
                     /locus_tag="ACJJDE_001205"
                     /pseudo
     CDS             12841..13089
                     /locus_tag="ACJJDE_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237325.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFP transporter"
     gene            13402..13704
                     /locus_tag="ACJJDE_001206"
     CDS             13402..13704
                     /locus_tag="ACJJDE_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541137.1"
                     /translation="MTWVGGSGNAQQSSYYCEICESAGLNDTGNPDKSLGLPNNTFSN
                     PPGWGATIGALAGSRIGMPEFGTFASHAIENFDWSWYRRYREIAETIEREYSGGLP"
     gene            13988..14140
                     /locus_tag="ACJJDE_001207"
                     /pseudo
     CDS             13988..14140
                     /locus_tag="ACJJDE_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009117473.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine peptidase family C39 domain-containing
                     protein"
BASE COUNT         3415 a         3422 c         3924 g         3600 t
ORIGIN      
        1 tcccgcgtgt acggcacgcc ccgcgctccg caatgatagg ggcggtttcg tttgaatcgg
       61 cgcaccggga tgaatgcccc cgcgccgtct cgataccgat ttaccggttg ttccgtatcg
      121 gttgccgccg tgaaatgacg gacggatgca ggaatgacgg cagacgggag gcggaggaaa
      181 tgattgattg acttatttta aaataaaaaa gtagaatgca gggcttattc cgcgtctgtg
      241 gacggttttg cctgcacggt cggttttctg tttaaaataa aataaaggag aaatgatgct
      301 gacgtttatc ggactgctga ttatcggggt catcgtatgg ttgctgctga cggaaaaagt
      361 gtcgcccatc atcgcattaa tcttggtgcc gctgtttggg gcgttgctgg cggggtttga
      421 tgtatcccaa ttaaaagaat tttattcggg cggcaccaaa tcggtgatgc agattgtgat
      481 tatgtttatg ttttccattt tgttttttgg aatcatgaac gatgtggggc tgttccgtcc
      541 gatgataggc ggtttgatta agctgactcg gggtaatatc gtggcagtga gtgtggggac
      601 ggtcttggtg tcggtggtgg cgcagttgga cggggcgggt gcgacgacgt ttttattggt
      661 cgtccccgcc cttttgccgc tttacaagcg tctgcatatg aatccttacc tgctgttttt
      721 gctgctgact tccagtgcgg gattgattaa ccttctgccg tggggcgggc cgactgggcg
      781 ggttgcaagc gtgttgggcg cagatgtggg cgaattgtat aaacctttgt tgacggtgca
      841 aattatcggt gtagtgttta tccttgcgct gtccctgctt ttgggtgtgc gtgaaaaaag
      901 gcggattgtc cgggagttgg gcgcgttgcc cgccgtggcg gatttgataa agccggtgcc
      961 tttgtcggaa gaagaacaaa aattggcgcg tccgaaactg ttttggtgga atgtcctgct
     1021 gtttttggcg gcgatgagcc tgcttttttc gggcatcttc ccgccgggtt atgtatttat
     1081 gctggctgca acggcggcgt tgcttttgaa ttaccgcagc ccgcaggaac agatggagcg
     1141 gatttatgcc cacgccggcg gcgcggtgat gatggcgtcc attattttgg cggcaggtac
     1201 gtttttgggg attttgaagg gtgcggggat gttggacgcg atttccaaag acattgtgca
     1261 tatcctgcca gacgcgctgc tgccttatct gcatattgcc atcggtgtgt tgggcattcc
     1321 gcttgagttg gttttgagta cggacgctta ttatttcgga ctgtttccga ttgtggagca
     1381 gattacctcg caggcgggcg tggcgcccga agcagcaggt tatgcgatgt tgatcggcag
     1441 tatcgtcggc acttttgtta cgccgctttc gccggctttg tggatgggct tgggtttggc
     1501 gaaattgtcg atgggcaaac acatccgtta ttcgtttttt tgggcgtggg gtttgtcgct
     1561 ggcgatattg gccagttcga tagcggcagg aatcgtgcct ctgccgtaaa cggcgaagcc
     1621 gtctgaagcc cgaatcgttc ctgtggtctg tcgcaggctc tgcctgcctg cccgtgtgtt
     1681 gcaatcgcgc cccaatgccg tctgaaggca gttgccggcg cggttttttt gtgctgcagt
     1741 tttgaaaaat accggcaagc gtaaaggccg ctaaattgcg gctaattttg gggtgttaga
     1801 ataggcacgg tttgtctgaa agggaaagtt gatgcgtgtt ttgctggtgg aagacgatgc
     1861 gatgattgcg gaggcggtgt cggcaagttt gaaagacggc ggctatgcgg tggattgggt
     1921 caaaaacggc gcgcggctgc cgctgcccag ccttatgact tgatgctgct ggatttgggt
     1981 ttgccggggc ggacggtttg gatgtttgtt ccgctggcaa tgcttgcagg tatgttttcc
     2041 tactacgaaa ccttccacga aacggaagcg ttgcaggacg acctgctccg tcaggcggca
     2101 ttgtacgtcg cccccgattc caaacccgaa actttgcccg agggcgacgg cgatacgcgt
     2161 attttggtac agatgccgca gcaggaagac cctgttgtca gcctgcctgc gcatctggcg
     2221 gacggtctgc acacgcttca ggcggacggg gacgacgatt attaccgcgt ctatatccgc
     2281 acgacggagc gggggcggat tgccgtgatg caggaaagcg aataccggga agatttggcg
     2341 gcggatgcgg cacggcaaag cgtgttgccc ctgctggcgg cactgccgct gatgatactg
     2401 ctgaccgtgt ggattacgca caaagccatg cgccccgtcc gcaaattgtc gcaaagtctc
     2461 gaacaacgcc gaatcaatga cctgtctgcc ttgagtgtgg acaatattcc cagtgaaatc
     2521 agagggttcg taaccgccat caacttgctt ttgaaacgtg cggatgaaga catccgccac
     2581 cgtcagcggt ttgtcgccga cgcggcacac gaattgcgta cgccgatgac agccctttcc
     2641 cttcaggcgg aacggctcaa caatatgtct ctgccacccg atgcggcgcg gcagtctgcc
     2701 gttttgcagc aaagcatacg gcgcaacaaa cacctgctcg agcagctttt ggcactggcg
     2761 cgttcgcagt cggacgaaac ccctttggcg aaaacgacat tcggtctgca aagccgtttc
     2821 cgccaagtgt tgcaggaact gatgccgctt gccttggaaa aacgtcagga cattggtgtg
     2881 gcggtcggag gtgatgtcga aatatttgcc gatgaaactg aaatctatac cttggttaaa
     2941 acgtttgttg ataacgcaat acgttatacc ccgtccgaag gcaggataga tttgggtttc
     3001 acagacgaag ggaaatatct tgccgtgtgg gtggaagata acgggaacgg cattccggaa
     3061 tccgaacgcg tccgcgtcct cgatccgttt taccgtattt tgggaacgga gcagcagggg
     3121 acggggctgg ggctgtcgat tgccgacacg ctagccaaaa aatacggcgg atatttggaa
     3181 ctgaccgaca gccgcaggtt cggacacggt ctgctgatac gcgccttgtt ggacaaggaa
     3241 accctgaaat agacagatgc cgtctgaagg cttcagacgg cattttttac atcagcacaa
     3301 tatcgtattg ttcctgcgtg taagcggttt cgaccgccag agaaatcggt ttgccgatga
     3361 aatctatcag cattgccaag gattgcgatt cttcgtccaa aaacaaatcg atgacgttgg
     3421 gggcggcgag gatgcggaaa ctttcggcat cgtaacggcg cgcttcgcgg acgatttcgc
     3481 gctggatttc gtagcacacg gtttgcggcg ttttcagacg gcctctgcct tggcaggaag
     3541 ggcagggttc gcagaggact tggtttaagt tttcgcgcga gcgtttgcgc gtcagctcga
     3601 ccagccccag gctggtaaaa ccgtgcaggg taacgcgggt acggtcgaag gcgagggctt
     3661 tggcaagctc ctgcaacacg gcttcgcggt ggctttcctg cgccatatcg atgaagtcga
     3721 tgatgatgat gccgccgagg ttgcgtagcc tcaattcgcg ggcgatggtg tggcaggctt
     3781 cgaggttggt gcggaagatg gtttcgtcga agttgcgtgc gccgacgaag ccgccggtgt
     3841 tcacgtctat cgtggtcatg gcttcggtgg attcgataat caggtagctg ccgaagttga
     3901 ggttgacgcg cggttgcagg gcgcggctga tttcctgttc gacgttgtgg gtttcaaaca
     3961 gcgggcgttc gcctttgaac aattctatcc tgcccaatgc gccgtggacg tattgttcgg
     4021 caaaacgcgt catgcgcccg tggtttacgg tggaatcgac gaggattttt tgcgtgtcgc
     4081 agccgaccat atcgcgcaat acgcgcaaac tcaagggcaa atcctgataa agcagggttt
     4141 ccggcggccg gattttcgcc tgttcttgga tgtgttccca cactttggtc aggtagtcga
     4201 tgtcggactg gagctgttcg tcggtggcgt tttcggcgtt ggtgcggatg atgtagcccc
     4261 ggcaggcatt ttccggcagg agcttgtcga ggcgttcgcg caggctgctg cgttcggcat
     4321 cgtcttcgat gcgttgggac acgccgatgt ggtcttcttg cggaagatgg acgaggaaac
     4381 gccccgccag cgagatttgg gtggaaagcc gcgcgccttt ggtgttgatc gggtctttga
     4441 tgacctgcac caaaacagac tgcccttcaa acagcatatg ttcgatgcgc tgggtttctt
     4501 cggggttgcg gcgttgttcg aggacatcga cgatgtgtaa aaacgccgcg cgttccaagc
     4561 cgatgtcgat aaacgcgctc tgcatcccgg gcagcacgcg gcgcaccacg cccagataga
     4621 tattgccgac caggctgtgt tcgctgttgc gctcgatgtg cagctcgcag atattgtttt
     4681 cctccaacac cgctacgcgc gtttcctgcg gcgtgatgtt gaccaatatc gtttcgggcg
     4741 ggcgcgcgat gtctttgggg atggggagtc ctgacaacat ggtttttcct gaaaatgtaa
     4801 taaaaatatt tttgcacccg ttccgccgcg cagcgcgggt gcaaaaatat ttttcacaat
     4861 gcctatcata ctttaaaaaa gaaactttga cacattccgc acatgccgtt tgaacgtgca
     4921 tctgttccgc acttgccaaa caggggaaat gcccctatat tgattatcat tgcaaaactt
     4981 tcggaaaccc aatatgcaga ccgttaccat gtacacaggt ccgttttgtc cctactgcgc
     5041 gatggcgaaa aggctgctgc acacggcagg tgtcggacat atcgacgaaa tccgtgtcga
     5101 tgcaagcccc gaagcctttg ccgaaatgca gcagctttcg ggacagcgca gcgtgccgca
     5161 gattttcatc ggcgaaacgc acgtcggcgg atttaccgac ctctaccgcc tccagcagga
     5221 aggcgggctg gacggactgc tgaaccctta acccccaact aggaaaacaa aatgagcgaa
     5281 gaactgcaac ccgtattcag catcgagcga ctgtatgtca aagacttgtc tttggaagtg
     5341 ccgcacgcgc cgcaaatctt tttggaacag ggcgagcctg aagtggatat gcgcgtttcc
     5401 accggcagcc aaaagctgga agacggctac tacaacgtgg acgttaccgt aaccgttacc
     5461 gccaagctgg ataacgagcg cacgatgttt ttgaacgaag taacccaaag tggcatcttc
     5521 cgtttggaaa acatccccga agaagatgtg cagctgctgc tgggcgtggc gtgtccgaac
     5581 atcctcttcc cttacgcgcg cgaagccgtt tccggtacgg taacacgtgc cggcttcccg
     5641 cccgtcctgc tcgcgccgat taattttgag gcgatttacc aacaacagca ggaagccgaa
     5701 gccgccgggg cttgattcct gcctgccgat gccgtctgaa tccgtttcag acggtatttt
     5761 tgttttcgga taaaataggt gcgttcaaag gaatctgcct atgatgtcgc ccgaaaccca
     5821 gaaacagctc aaaatcaccg atgtttccgc caagaagctc gacaaactca acctccatac
     5881 cgcgtgggat ttggtgttgc acctgccgct gcgttacgag gacgagacgc acattatgcc
     5941 gattaaggac gcgccgattg gcgtgccgtg ccaggtcgag ggcgaggtta tccatcagga
     6001 agtaacgttc aaaccgcgca agcagttgat tgtccaaatc gccgacggtt ccggcagcgt
     6061 cctttttctg cgcttcatcc acttttacgc cagccatcag aaacagacgg cggtcggcaa
     6121 acgcatccgc gccgtgggcg aaatcaaaca cggcttttac ggcgacgaga tgattcatcc
     6181 caaaatccgc gatgccgagg gcggcggttt ggcggaaagc ctcacgccgg tttacccgac
     6241 cgtaaacggt ttgaaccagc ccactttgcg ccgtattatt cagacggcgt tggacgttac
     6301 gccgctgcac gacacgctgc ccgatgccct gctgtgccgt ctgaagctgc cacacctcgc
     6361 cgaaagcctg cgtcttttgc attcgccgcc gccgagtttc acgattcatc agctttcaga
     6421 cggcacgctg cctgcatggc aacggctcaa attcgatgaa cttttggcgc aacagctttc
     6481 gatgcgcttg gcgcgacaga agcgtatcgg cggcacggcg gcggcattgg gcggcgacgg
     6541 cacattgacc caagccctgc gccaagccct gccgtttgcc ctgaccgatg cgcaagaaaa
     6601 agttgtttcc gaaatctgcc gcgatatggc gcaaacctac ccgatgcacc gcctgctgca
     6661 gggcgatgtc ggcagcggca aaaccattgt cgccgccttg tccgcgctga ccgccatcga
     6721 atccggtgcg caggtggctg taatggcgcc cactgaaatc cttgccgaac aacattttat
     6781 taaatttaaa caatggctcg aacctttggg cattgaagtt gtccgccttt ttggcagttt
     6841 gcgtaaaaaa gccaaagacg aagccaaagc caaactcgcc gacggcagcg tcaaaatcgc
     6901 catcggcacg cacgccctgt tttcagacgg cgtgacgttt cacaatttgg gcctgaccat
     6961 cgtggacgaa cagcaccgtt tcggcgttgc ccaacgcctc gcccttaaaa acaaagggcg
     7021 cgaagtccat cagttgatga tgtccgccac gcccatcccg cgcacgcttg cgatgagttt
     7081 tttcgccgat ttggacgtgt ccgtcatcga caaactgccg cccgggcgca ccccgattaa
     7141 aacgcgcctc gtcaacaacg tccgccgcgc cgaagtcgaa ggcttcgtcc tcaatacttg
     7201 ccgaaaaggg cggcaggcgt attgggtctg cccattgatt gaagaaagcg aaaccctgca
     7261 actgcaaacc gccgccgaaa ccctcgcccg gcttcagacg gcattgcccg agctgaatat
     7321 cggactggta cacgggcgca tgaaggccgc cgaaaaggcc gaagtgatgg cacggttttc
     7381 ttcgggggag ctgaacgtct tggtcgccac caccgttatc gaagtcggcg tagatgtgcc
     7441 caatgccgcc ctgatggtca tcgaacacgc cgagcgcatg ggcttggcgc agctgcacca
     7501 attacgcggt cgggtcgggc gcggcgcggc agaaagcgtg tgcgtcctcc tgtttgccga
     7561 acccttgggc gaactcgcca aagcgcggct gaaagtcatc tacgaacaca ccgacggctt
     7621 tgaaatcgcc cgccaagacc tcaacatccg cggccccggc gaatttctcg gcgcgcgtca
     7681 aagcggcgtg cctatgctgc gtttcgccaa gctcgaagaa gacttacacc ttttggaaca
     7741 agcgcgcgaa atcgccccga tactgattga acaaaacccc gaaatcgtcg aagcgcattt
     7801 ggcacgatgg ctttccggca gggaaggtta tttgggcgtg tgagcgaaat gtcgccggaa
     7861 atattggaaa aaagtgcaac ggaatctgat tttgcattat ttttgacaca ttttcatgat
     7921 tttaaatctc gttattccca agtgggcgga aatccggcaa tgggaagccg cagagactta
     7981 tcgggaaaac ggcaagccct ccgccgtcat tcccgcgcag gcgggaatct agaaatgaaa
     8041 aaccacggtg ttatcggaaa tgattgaaac cggagaaatg acggaatcga agcgtgtgga
     8101 aatgtgtcgg aaatcgctga agccggataa actagattcc cgcttttgcg ggaatgacgg
     8161 gattttaggt ttttggtttg ttttcacggc aatgatggga ttttaaattg caggtattta
     8221 ccgggaaaaa cggcaagccc tccgccgtca ttcccgcgca ggcgggaatc tagaaatgaa
     8281 aaaccacggt gttatcggca atgactgaaa ccggagaaat gacgaaattg aagcgtgtgg
     8341 aaatgtgtcg gaaatcgctg aagccggata aactatagtg gattaaattt aaatcaggac
     8401 aaggcgacga agccgcagac agtacagata gtacggcaag gcgaggcaac gctgtactgg
     8461 tttaaattta atccactata gattcccgct tttgcgggaa tgacgggatt ttagattttt
     8521 gttttcgcgg aataatgagc caaaagccgt ctgaacctaa aaaaccgcca ctttcagatg
     8581 gcatcaaaaa accgcaggca cgatacctgc ggtttgccgt ttgcgtttca ggggagcagg
     8641 gggattgcgt ccaagccgtg tgtttccttc agtccgaaca tgatgttcat attttgcacc
     8701 gcctgacccg ccgcgccttt gacgaggttg tcgatgacgg aaaggacgac ccacacatcg
     8761 gattgcgccg cctgttggat gctgatgcgg cagaggtttg cgccgcgcac gctgcgggtt
     8821 tcgggtgtcg aaccggcggg caggatgtcc acgaacaggc tgtcgcggta atagtcgcgc
     8881 aggatggttt cggggcagat gccgtctgaa aggtggaggt aaacggtggc gtgcataccg
     8941 cgtatcatcg gcgcgaggtg cggcgtgaac acgaatcctt cggcgatgcc gtcctgaagc
     9001 ccggcgatgg tctgcctgat ttcgggcagg tggcggtgtc cagctatgcc gtaggctttg
     9061 aagttgtcgc cgacttcgca caacagcgaa ccgacattgc ctttcctgcc cgcgccggac
     9121 acgccggatt tgcagtcggc aatcagcggc ataccgggct tcagacggca ttgccgcaac
     9181 agcggcacga gcggcaggga tacgcaggtc gggtagcagc cggggttggc gacgaggcgt
     9241 gcctgtgcga cggcttcgcg gttgagttcg ctcaatccgt acacggcttg ggaaacgagg
     9301 tcgggggcgg cgtgggtcat gccgtaccag tgttcccagg tcggaatgtc ccgtatgcgg
     9361 aagtcggcgg aaaggtcgat gacgcgcacg ccctgttcaa tcaggcgcgg cgcgtctttc
     9421 atggcgatgc cgttgggcgt ggcgaagaag acgatgtcgc attgttccaa acctgcctcg
     9481 tcgggcgttt ggaaggcgag gccgtacacg ccgcgcaaac tcggaaagta atcggcaact
     9541 gcagttcccg cttcgctgcg gctggttacg gcggcgactt cgacatcggg atgggcggca
     9601 agcaggcgca gcagttccac gcccgtgtag cccgtcgcgc cgacaatgcc gactttgatt
     9661 tttttactca tggtttttcc tttgtgtggt tggcgggtat gccgtccgaa cgctgtccga
     9721 cggggttttg attggcggtg gaaggacggt acacaaagcg tttgaaaagc gtgtctaatt
     9781 taatggcatc cgcctctgtt tttaaaaccc agccctgccg tccggaataa acataaccgt
     9841 aggcgcgaaa gtcggcagga tatttcggtg cctgccccaa acccaaaccg tatgcggcga
     9901 aagcggtggt cgtggagaag gaaagcagga ggaggacgag ggttttcata aggttccaaa
     9961 ccggacgggg cgatgaagcc cgattatagc aaaaggtcgt ctgaaaaccg ttttcagacg
    10021 accttttatt taattacaat aaaaatgtta acaacaaaaa acaaaccgct ttttttcgtt
    10081 tggaaacaaa acaaattttt atagtggatt aaatttaaac cagtacagcg ttgcctcgcc
    10141 ttgccttgcc gtactatctg tactgtctgc ggtttcgtcg ccttttcctg atttttgtta
    10201 atccactata actaaaattg tcaacaattc cttgacgcac acacaaaaaa aactttaata
    10261 tttgtaaata tatgtaacat tataaatttt aaatattttc tgagtaaggg gaagtaatga
    10321 gcatccatct cgacttcggc attagtccta aaacgttccg acagacttat ctgtatcaaa
    10381 agcccaagct ctttaaagga gcggctcgga atctcgaagc cgcatcttgg aaagatatca
    10441 acgagatata ccaacgagca gacccaaccg caccgctgtt ttatctgcgt aaaaaaggtg
    10501 caattgttcc taaagaagaa tacgtcgaaa gtttcgacgc tttgggcaaa actcgctacc
    10561 gttttattaa atccgttatc tacgaacata tgaagaatgg tgcgtcgtta gtctataacc
    10621 atattaacaa cgagccgttt tcagatcata tttcccgtca agtcgcccgc tttgctggcg
    10681 cacatactat tgtcagtgga tatcttgctt ttggcagcga cgaatcttat aaaaaccatt
    10741 gggacacccg cgatgtgtat gccatccagc ttttcggcaa gaaacgttgg caacttactg
    10801 cccctgattt ccctatgcca ttgtatatgc aacagactaa agatactgat atttccattc
    10861 ctgaacatat cgatatggat attatccttg aagcaggtga tgtcctctac atcccgcgcg
    10921 gttggtggca cagacctatc ccgctcggct gtgaaacctt ccacctcgct gtcggtacct
    10981 ttccgcccaa cggctataat tacctcgagt ggctaatgaa gaaattcccc acgatagaaa
    11041 gtctgcgcca cagtttctca gactgggagc aagataggac gcgtatcaac gatactgccg
    11101 cacaaattgc tgccatgatt gccgaccccg tcaattacga agccttcagt gaagacttcc
    11161 tcggcaaaga acgcaccgat accgcttttc atctcgaaca gttcgcgaat cccaacgcta
    11221 ctccgctttc agacgacgtc aggttgagac taaatgccaa taatttggat acgttggaaa
    11281 aggggtattt gattgggaat gggatgaaga taagcgtaga tgaattgggg aaaaaagttt
    11341 tagaacacat cggtaagaat gaaccgttat tgttgaaaaa tctactggtt aacttcaatc
    11401 agggaaaaca tgaagaagtt aggaagttga tttatcagtt gatagagtta gattttctgg
    11461 aacttttgtg agggattcta tgaaaaactg gaagcaattt acatttttcg taatattagt
    11521 aatagcttgt tatcaagtgc tatatttttt atcagatatg tttcttctcg actacattaa
    11581 caaatatagt tggaatttga attttattca gggtactttg aatttttttt caatatatct
    11641 gccatatgtt tttgttagcc gaatttttag gaatactaac caatgaaaga ctaggctatg
    11701 aaatcaaaat ttatgtataa gttactggta cttgcaaagt acctgtatat tttaatttgt
    11761 atatcaatac caatcgtttt tatttatgaa agctaccaag gagatgatgt tgattttatg
    11821 atttatattc atgcttttat tattttttcc atattgggtg tattgactca atattctacg
    11881 tctaattttt ttggaaagga aaaataacat cattgaacta tccattgaga atctggagct
    11941 aatttatggc ggaggcttag gggagagaat ccttgaagga ggagcaaatg gtgcacaaat
    12001 aggaggatca attggtgcag gtattggtct gggtgtcggt atagtttctg gtggtattcc
    12061 tgccggaccg gctattattc tcggtggcac agttggtgct gctgttggtg ctgtaactgg
    12121 tatgggtgtt gcagcatatg agtattacta agaaactcag cccaaaggga cagtaacggt
    12181 cggtccgatt tctgcttttg ctgtggacaa atcaggaaac ggctacactg acggtacaga
    12241 ttactgctga tatttctcat ctttcagacg atctctaggg gtcgtctgaa actttcttaa
    12301 cttcaatttt atgaatagac ccaagcaacc tttcttccgc cctgaagtca cagttgcccg
    12361 gcaaaccagc ctgacgggta aagtgattct gacacgaccg ttgtcatttt ccctatggac
    12421 gacatttgca tcgatatctg cgttactgat tatcctgttt ttgatatttg gtaactatac
    12481 gcgaaagaca acagtggagg gacaaatttt acctgcatcg ggcgtaatca gggtgtatgc
    12541 accggatacg gggacaatta caacgaaatt cgtggaagat ggagaaaagg tcaaggctgg
    12601 cgacaagcta tttgcgcttt cgacctcacg tttcggcgca ggaggtagcg tgcagcagca
    12661 gttgaaaacg gaggcagttt tgaagaaaac gttggcagaa caggaactgg gtcgtctgaa
    12721 gctgatacac gagaatgaaa cgcgcagcct taaagcaact gtcgaacgtt tggaaaacca
    12781 gaaactccat attttgcaac agatagacgg tcagaaaagg cgcattagac ttgcggaaga
    12841 tcagtggcaa aaacggcact gggcagacag gaattgtcgg gattgggcat ggtatcctcc
    12901 gatttggcga agagcagcga acctgtttat cttgtgaaaa taaaacccga caaatcaacc
    12961 atcactgcat acggtgagga aaaaccgctg caaatcggca tgacgttgga agcagacatc
    13021 ctgcacgaga aacggcgatt gtacgaatgg gtattggagc tgatttatag tatatcgggc
    13081 aaactgtaag acttgaggct gaaagataaa gaagttgtct gaaacctttt cagacgacca
    13141 gaagacaata tataaaaaca caaacttcaa aactgcctga aaccatcctc ttttacaggc
    13201 actccgtctg taaaagcaag gatagggcat ctgccctttt gattgtttga ttaacgatac
    13261 aaggagtttc aaaatgagag ttttatagtg gattaacaaa aaccagtaca gcgttgcctc
    13321 gccttgccgt accatttgta ctgtctgcgg cttcgtcgcc ttgtcctgat ttaaatttaa
    13381 tccactatat gtgttcatga aatgacttgg gtcggaggct caggtaatgc gcaacaaagt
    13441 tcatattatt gcgaaatttg cgaatctgca gggcttaacg atacgggaaa tcctgataaa
    13501 tctttaggat tgccaaacaa tacgttcagt aatccgcctg gttggggagc tacaatcgga
    13561 gctttagcag gtagccgcat agggatgcct gaatttggta cgtttgcgag ccatgccatt
    13621 gaaaatttcg actggtcatg gtatcgacgt tatagggaaa ttgccgaaac gattgaacga
    13681 gaatattcag gcggtttgcc ttaatagttg aggaggtcat gatgtttgcc aaacattatc
    13741 aattcatcgc actcggcatc atgctgcttc tttatatgtt gattctctat acgaccgatt
    13801 tttccaatct gacgtattgg atgctgtttt ttatctgttt tattacagga aaaatattag
    13861 ctcgtttgtt agagaaaagc tttaaataaa atagcagcta gtcgcaaaag gtcgtctgaa
    13921 accttttcag gcggcctttc taaaatacat ccaacttcct aatccctatt tttcaaaaag
    13981 gaaatctatg ccccatctgc aaaacctgtc tttgggctta aagaaaaagc tgcctgttat
    14041 cctgcaaaca gaaatatcag aatgcggctt ggcatgtctg gcggctgtgg cgggatttca
    14101 tggtttccat acgaatttac gcgcactgcg ttcaaaatac tgtccgagac ctttgcaaaa
    14161 ttccccaaaa tcccctaaat gtcttggtgg gaattttggg gaattttgca aaggtctcat
    14221 tctataactg taaatacttt taaatttatg acaaaatagt aaatattgct aaaataatat
    14281 tgatgtcatg aaattttttc ctgctccatg tctgttggtt atcctggctg tcatacccct
    14341 taaaacctta gctgccgatg a
//
LOCUS       DBBZXU010000048        14070 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.048, whole genome shotgun sequence.
ACCESSION   DBBZXU010000048 DBBZXU010000000
VERSION     DBBZXU010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 14070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14070
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.048"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1707
                     /locus_tag="ACJJDE_001208"
     CDS             <1..1707
                     /locus_tag="ACJJDE_001208"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006306 - obsolete DNA methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7541138.1"
                     /translation="LYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRYTADGKQ
                     AVGEIKRHSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDPPYYFVKKKQQDSF
                     GYNTNFKLSTWLTFMKNRLSIAKELLTDDGIIVISIDDDGNAYLKILLDEIFGFENFI
                     GNLPTIMNLKGNNDEYAFAGTHEYTLVFAKNKDKSTFYEFPIDEDNFLEKWEEDEIGF
                     YKKGAPMRATGTEDKREDRPEMFYPFLVKNNTVSTITDEEFSQIYNKDLEVFNDDFIQ
                     KLKEKYENLGYNFILPIADKQWGRWRWGYSIKNKARLQTDIIVSQSKNGISLYKKQRP
                     ELDDLPTKKPKTIFYKPEYSSGNGTEQMKNLFGEKAFKNPKPEELIQDFITITTNESD
                     IVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGEQGGISKAVNWQ
                     GGGEFVYAELAPFNETAKQQILACEDSDGIKTLFEGLCERYFLKYNVSVNEFSQIIQE
                     PEFQSLPLDEQKQMVLEMLDLNQMYVSLSEMDDEQFADCLNDDDKAVSRAFYQAEKKN
                     GE"
     gene            1697..4483
                     /locus_tag="ACJJDE_001209"
     CDS             1697..4483
                     /locus_tag="ACJJDE_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HGG7541139.1"
                     /translation="MANNKTLFEVIENRKAVYLEDGDDEKYRLPKFVSNNLKYPFFEW
                     QKSALENFVIFDRTSKLKDFPDIKNRPTHLLFNMATGAGKTMMMAALILYYFEKGYRH
                     FLFFVNQNNIVDKTENNFIDPTHAKFLFTEKILQGDTVIPIRKVETFSPHSDGIEIKF
                     TSIQKLYNDIHTERENQTTLADLHELNLVMLGDEAHHLNAQTKGKKQGELDLEVELKA
                     NAGNAEIERKGWEHMVLELLLNKNGNPSQNVLLEFTATLPENADVQQKYADKIITKFG
                     LKEFLQKGYTKEINLVSSTLGKKERVLHALLFAWYRHQIALKYGIANFKPVMLFRSKT
                     IDESKADYLAFLNWAENVQAVDFSFLTTFSTSLNDSDSDNANEQGKTRTEQALKFMQE
                     KGVEFAHLADWVKQNYQKHNVIITNSETNKTKTEKTDSETEKLLNNLEAADNPIRAIF
                     TVDRLTEGWDVLNLFDIVRLYEGQNGGGSNKKSGKTAAATVSEKQLIGRGVRYFPFAF
                     EGKQPNKRKFDNDMQHELRILEELFYYAHDEQSRYISELKNELRKDGYLPEKDDDKVL
                     ATFKLKSEFAANKDFRELLIWANKKIPNPNAKSNNADSLKANPQTLSFQVHGNQLLQE
                     TQFTADENDETARQIGTQNNFTQTIKMSEMERHIFNKALHIKGKNSQSLFHFNRLQSK
                     LDIQNRNELQNNLLKDWQIEFLGLGQDKQVRLDDKLAGCLKILEMVEKHLNESDMPFI
                     GTKEFTPKKLWEIFGTPKQKWVKKDDVKTTIATQNDWYVMNNFAGTGLEEALIQFISA
                     RLGDLKSKYDVHLIRNEEVFKLNNFADGEGFMPDFILLLKDKQKSSSNGVNDFLHYQI
                     FIEPKGEHLVETDGWKEEFLEAITVEYGMDKILQKDTPHYRLIGLPFFTDHQKNGQFT
                     ESFPLGAASLEKMK"
     gene            complement(4627..5799)
                     /locus_tag="ACJJDE_001210"
     CDS             complement(4627..5799)
                     /locus_tag="ACJJDE_001210"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HGG7541140.1"
                     /translation="MKRDLSKMTCIEDLRRVAKRKMPRMFYDYIDSGSWTETTYRENT
                     SDFKDIRFRQKVLVNMEGRSLETKMIGQDVKMPVAIAPTGFTGMAHADGEILAARAAE
                     KFGIPFTLSTMSICSIEDVAENTSAPFWFQLYVMRDREFMENLIKRAKDAKCSALVLT
                     ADLQVLGQRHKDIKNGLSAPPKPTIANLINLATKPEWCMKMLNTERRTFRNIVGHAKN
                     VGDLSSLSSWTSEQFDPRLSWDDVARIKDLWGGKLIIKGIMEPEDAEKAAKSGADALI
                     VSNHGGRQLDDTVSAIKALPDIVSAVGSDIEVWMDSGIRSGQDILKAWALGAKGTMIG
                     RAFLYGLGAYGEEGVTRALEILYKEMDISMAFTGHRDIQDVDASILRGKDWGRETV"
     gene            6149..6595
                     /gene="iscR"
                     /locus_tag="ACJJDE_001211"
     CDS             6149..6595
                     /gene="iscR"
                     /locus_tag="ACJJDE_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004519894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HGG7541141.1"
                     /translation="MRLTTKGRFAVTAMLDLAMNAQTGAVKLSAISERQNISLSYLEQ
                     LFGKLRRAGLVESLRGPGGGYILAAPAARINIAQIIAAAEDRLDATQCGSKANCHHGA
                     PCLTHDLWENLNKTINDYLGSVTLQSIIEQKNNSDGSRVVQFTHIH"
     gene            6624..7838
                     /locus_tag="ACJJDE_001212"
     CDS             6624..7838
                     /locus_tag="ACJJDE_001212"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IscS subfamily cysteine desulfurase"
                     /protein_id="HGG7541142.1"
                     /translation="MTVKTPVYLDYAATTTVDKRVAEKMIPYLTETFGNPASNSHAFG
                     WEAEEAVEKARADIAALINADPKEIVFTSGATESDNLAIKGAANFYKTKGKHLITVKT
                     EHKAVLDTMRELERQGFEVTYLGVQENGLIDLEELKAAIRDDTILVSVMWANNEIGVV
                     QDIPAIGEICRERKIVFHVDAAQACGKVPVDVEAAKIDLLSMSAHKVYGPKGIGALYV
                     RRKPRVRLEAQMHGGGHERGFRSGTLPTHQIVGMGEAFRIAKEELAQDTAHYLKLRDI
                     FLKGIEGIEEVYINGDLGHRAPNNLNVSFNFVEGESLIMAVKELAVSSGSACTSASLE
                     PSYVLRALGRNDELAHSSLRITFGRMTTEEEVQFAAELIKSKIGKLRELSPLWEMFKD
                     GIDLNSIEWAAH"
     gene            7984..8829
                     /locus_tag="ACJJDE_001213"
     CDS             7984..8829
                     /locus_tag="ACJJDE_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HGG7541143.1"
                     /translation="MKIANALIHNTVRIECLSADGQSISTGTAFLFLFDFDKTGVIPV
                     LVTNKHVVFVESAKKIAITLTKDENGSPNHKENITFTIEDFIQNCLPHPDENIDLCIA
                     PVGHFFNQLINHNFSPFIKGIRESDIMQTEEMDQLSAFEEVFMIGYPNGLWDSKNNLP
                     IFRTGITATHPAIDFEGKKEFMIDVACFPGSSGSPVFKYIPAGLRKIENDGFAITADE
                     TFKLMGILYAGPQQTISGEIYITTVNKPISVSSIPINLGFVIKAEKLLDFKPILKNFL
                     EKNRE"
     gene            8976..9104
                     /locus_tag="ACJJDE_001214"
     CDS             8976..9104
                     /locus_tag="ACJJDE_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541144.1"
                     /translation="MNEQELDLDNLDNLLDDFDGVTVEGGVDSENDEGCEGGACKI"
     gene            9172..9558
                     /gene="iscU"
                     /locus_tag="ACJJDE_001215"
     CDS             9172..9558
                     /gene="iscU"
                     /locus_tag="ACJJDE_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HGG7541145.1"
                     /translation="MAYSDKVIDHYENPRNVGTFDKNDESVGTGMVGAPACGDVMRLQ
                     IKVNDEGIIEDAKFKTYGCGSAIASSSLITEWVKGKSLDDALAIKNSEIAEELELPPV
                     KIHCSILAEDAVKAAVADYRKRQENR"
     gene            9645..9965
                     /gene="iscA"
                     /locus_tag="ACJJDE_001216"
     CDS             9645..9965
                     /gene="iscA"
                     /locus_tag="ACJJDE_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HGG7541146.1"
                     /translation="MITLTENAAKHINDYLAKRGKGLGVRLGVKTSGCSGMAYNLEFV
                     DEADGDDLIFEGHGARIYIDPKSLVYLDGTQVDYTKEGLQEGFKFENPNVKDSCGCGE
                     SFHV"
     gene            complement(9925..10146)
                     /locus_tag="ACJJDE_001217"
     CDS             complement(9925..10146)
                     /locus_tag="ACJJDE_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome-rescue factor A"
                     /protein_id="HGG7541147.1"
                     /translation="MGGKVQHNKGKIRDNALKALVKSDLFRHKVERKRKGKGSYNRQE
                     AKKWRDGFDTVPPFLCLKRGSFRRSRRSL"
     gene            10228..10728
                     /gene="hscB"
                     /locus_tag="ACJJDE_001218"
     CDS             10228..10728
                     /gene="hscB"
                     /locus_tag="ACJJDE_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001671 - ATPase activator activity
                     [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0044571 - [2Fe-2S] cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly co-chaperone HscB"
                     /protein_id="HGG7541148.1"
                     /translation="MSQYFTLFRIEPAFDIDTENLEQTYRALAARFHPDKFASASAFE
                     QKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTAFAPEFLMQQMEWRET
                     LMEARAGNDLESLKNLDNEIRDEQEKLFCGLKQSFARQDYDTAAQQVRQGRFLDKLRN
                     EISSAL"
     gene            10826..13576
                     /gene="gyrA"
                     /locus_tag="ACJJDE_001219"
     CDS             10826..13576
                     /gene="gyrA"
                     /locus_tag="ACJJDE_001219"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HGG7541149.1"
                     /translation="MTDATIRHDHKFALETLPVSLEDEMRKSYLDYAMSVIVGRALPD
                     VRDGLKPVHRRVLYAMHELKNNWNAAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQ
                     NFAMRYVLIDGQGNFGSVDGLAAAAMRYTEIRMAKISHEMLADIEEETVNFGPNYDGS
                     EHEPLVLPTRFPTLLVNGSSGIAVGMATNIPPHNLSDTVNACLRLLDAPDTEIDELID
                     IIQAPDFPTGATIYGLSGVREGYKTGRGRVVMRGKTHIEPIGRNGEREAIVIDEIPYQ
                     VNKAKLVEKIGDLVREKTLEGISELRDESDKSGMRVVIELKRNENAEVVLNQLYKLTP
                     LQDSFGINMVVLVDGQPRLLNLKQILSEFLRHRREVVTRRTLFRLKKARHEGHIAEGK
                     AVALSNIDEIIRLIKESPNAVEAKDKLLAHPWRSSLVEEMLTRSGLDLEMMRPEGLAA
                     NIGLKEQGYYLSEIQADAILRMSLRNLTGLDQEEIVESYKNLMGKIIDFVDILSKPER
                     ITQIIRDELEEIKTNYGDERRSEINPFGGDIADEDLIPQREMVVTLTHGGYIKTQPTT
                     DYQAQRRGGRGKQAAATKDEDFIETLFVANTHDYLMCFTNLGKCHWIKVYKLPEGGRN
                     SRGRPINNVIQLEEGEKVSAILAVREFPEDQYVFFATAQGMVKKVQLSAFKNVRAQGI
                     KAIALKEGDYLVGAAQTGGADDIMLFSNLGKAIRFNEYWEKSGNDEAEDADIETEISD
                     GIEDETADSENALPSGKHGVRPSGRGSGGLRGMRLPADGKIVSLITFAPETEESGLQV
                     LTATANGYGKRTPIADYSRKNKGGQGNIAINTGERNGDLVAATLVGETDDLMLITSGG
                     VLIRTKVEQIRETGRAAAGVKLINLDEGETLVSLERVAEDESELSDASVISNVTEPEV
                     EN"
     gene            13733..14070
                     /locus_tag="ACJJDE_001220"
                     /pseudo
     CDS             13733..14070
                     /locus_tag="ACJJDE_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         4336 a         3383 c         3029 g         3322 t
ORIGIN      
        1 ttatacacta aattaacccg aaaaagacaa gaaatctttt ttaatcaaac gcttgctttt
       61 gatgaaatcg atcggctttt tgacgcaaaa gcattctcaa aattctctcg ctataccgca
      121 gacggcaaac aagcggttgg cgaaatcaaa cgtcattcag acggcacacc cgccgaaaat
      181 ctcattatca aaggcaataa tctgatagcc ctacattcgc ttgccaaaca gtttaaaggc
      241 aaagtgaagt tgatttatat tgatccgcct tattattttg ttaaaaagaa acaacaagat
      301 agttttggtt ataacactaa ctttaaatta tctacttggc ttacatttat gaaaaatcgt
      361 ttatcaattg ccaaagaatt attaactgat gatgggatta ttgttatttc cattgatgat
      421 gacggaaatg cttatttaaa gattttgtta gatgaaattt ttggatttga aaattttatc
      481 ggaaatttac ccactattat gaatttaaaa ggtaataatg atgaatatgc ttttgcaggc
      541 actcacgaat acacactagt ctttgctaaa aataaagata aatctacttt ttatgaattt
      601 ccaatagatg aagataattt tttagagaaa tgggaagaag atgaaattgg gttttataaa
      661 aaaggagctc caatgcgagc aacaggaacc gaagataaaa gagaagatag acctgaaatg
      721 ttctatcctt ttttggtaaa aaataacaca gttagtacaa ttacagatga agaattttct
      781 caaatctata ataaagattt agaagtattc aatgatgatt ttattcaaaa actaaaagag
      841 aaatacgaaa atcttggata caattttatt ttacctattg ctgataaaca atgggggcgt
      901 tggcgttggg ggtattcaat aaagaataag gcaaggctgc agacggatat tattgttagc
      961 caatctaaaa atggaatttc cttgtataaa aaacaaagac ctgaattaga tgatttacct
     1021 acaaaaaaac ctaaaactat tttttataaa cctgaataca gtagtggtaa tggaactgaa
     1081 cagatgaaaa atctttttgg tgaaaaggca tttaaaaatc ctaaaccaga agaacttatc
     1141 caagatttta ttaccatcac aaccaacgaa tccgacatcg tcttagacta ccatcttggt
     1201 agtggcacaa ccgccgccgt tgcccacaaa atgaaccgac aatatatcgg tattgaacaa
     1261 atggattata ttgaaacgct tgccgttgaa cgcttgaaaa aagtgattga tggcgagcaa
     1321 ggcggtattt ccaaagccgt gaattggcaa ggtggtggcg agtttgttta tgccgaactt
     1381 gccccattta acgaaaccgc aaaacaacaa attttggctt gcgaagattc agacggcatc
     1441 aaaacgctgt ttgaaggttt atgcgaacgc tatttcttga aatacaacgt cagcgtaaat
     1501 gaatttagtc aaatcattca agagcctgaa tttcaatctt tgccattaga cgaacaaaaa
     1561 caaatggtgc ttgaaatgtt agatttaaat caaatgtatg tttcattatc cgaaatggac
     1621 gacgagcaat ttgcagattg cctgaacgat gacgataaag cggtaagccg tgcgttctat
     1681 caagcggaga aaaaaaatgg cgaataataa aactttgttt gaagtaattg aaaaccgcaa
     1741 agctgtgtat ttggaagacg gagatgatga aaaatacagg ctgcctaaat ttgtttcaaa
     1801 taatttgaaa tatccgtttt ttgaatggca aaaatcggct ttagaaaact ttgtgatttt
     1861 tgaccgcact tcaaaattaa aggattttcc cgatatcaaa aaccgcccta ctcatttgct
     1921 atttaatatg gcaacaggtg caggcaaaac gatgatgatg gcggcattga ttttgtatta
     1981 ttttgaaaaa gggtatcggc attttctgtt ttttgtgaat caaaacaata tcgtggataa
     2041 aacggaaaat aattttattg acccgacaca cgcaaaattt ttatttaccg agaagatttt
     2101 gcagggcgat acggtaattc ccattcgcaa agtggaaacg ttcagcccac attcagacgg
     2161 cattgaaatt aaatttacca gcattcaaaa gctgtataac gatattcaca ccgaacggga
     2221 aaaccaaacc acattggcgg atttgcacga attgaatctt gtgatgctgg gcgatgaagc
     2281 acaccattta aacgcgcaaa ccaaaggcaa aaaacaaggc gagttggatt tggaagtgga
     2341 attaaaagcc aatgcaggca atgccgaaat tgaacgcaaa ggctgggagc atatggtttt
     2401 ggaattgtta ctcaataaaa atggcaatcc cagccaaaat gtgctgttgg aatttaccgc
     2461 cacgctgcct gaaaatgctg acgtgcaaca aaaatacgcg gataaaatca tcacaaaatt
     2521 tggcttaaaa gaatttttgc aaaaaggtta taccaaagaa atcaatttgg tatccagtac
     2581 gctgggcaag aaagagcggg tgttgcacgc tttattattt gcttggtatc gccatcaaat
     2641 cgctttgaaa tatggcattg ccaatttcaa gcctgtgatg ttgtttagaa gtaagacgat
     2701 tgatgaatca aaagcggatt atctggcatt tttaaattgg gcagaaaatg tgcaggcggt
     2761 tgatttttcg tttttaacta cattttcaac aagcttgaac gatagcgata gcgataacgc
     2821 caacgaacaa ggcaaaaccc gcactgaaca agccctaaaa tttatgcagg aaaaaggcgt
     2881 tgagtttgca catttggcag attgggtaaa acaaaattat caaaaacaca atgtgattat
     2941 taccaactcc gaaaccaaca aaaccaaaac cgaaaaaacc gacagcgaaa cagaaaaatt
     3001 gctgaataat ttggaagcgg ctgataatcc gattcgtgcc atttttacgg tggacagatt
     3061 aaccgaaggt tgggacgttc tgaatttgtt tgatattgtg cgtttgtatg aagggcaaaa
     3121 cggcggcggt tcaaataaaa aatcaggcaa aacggctgcc gccaccgtat cggaaaagca
     3181 gttgattggt cgtggcgtgc gttattttcc atttgcgttt gaaggtaaac agccgaataa
     3241 acgcaaattt gacaacgata tgcaacacga attgcgtatc ttggaagaat tgttttatta
     3301 cgcgcacgat gagcaatccc gctatatttc agaactgaaa aatgagttgc gaaaagacgg
     3361 ttatttgcct gaaaaagacg atgataaggt attggcaaca tttaaactca aatctgaatt
     3421 tgccgctaat aaggatttta gagaattgtt aatttgggcg aataaaaaaa tccccaaccc
     3481 aaacgccaaa agcaataatg cagacagcct aaaagccaat ccacaaacgc tttcattcca
     3541 agttcacggt aatcaactgt tgcaggaaac gcaatttaca gccgatgaaa atgatgaaac
     3601 agcccgacaa atcggcacac aaaataattt tactcaaacc ataaaaatga gtgaaatgga
     3661 gcggcacatt ttcaataaag cattacatat caaagggaaa aatagtcaat ctttattcca
     3721 tttcaaccgt ttgcaaagca agctcgacat tcaaaatcgc aatgaattgc aaaataactt
     3781 gttgaaagac tggcaaattg aatttttagg attagggcaa gacaaacagg ttcgcctgga
     3841 cgataaactt gcaggctgcc tgaaaatctt ggaaatggtt gaaaaacatc tgaatgaaag
     3901 tgatatgccg tttatcggta caaaagaatt tacacctaaa aaattatggg aaattttcgg
     3961 cacgccaaaa caaaaatggg tcaaaaaaga tgatgtaaaa acgactattg ccacgcaaaa
     4021 tgattggtat gtgatgaata attttgccgg aacgggtttg gaagaagcgt taattcaatt
     4081 tatttcagcg cgtttgggcg atttgaaatc taaatatgac gttcatttaa tccgtaatga
     4141 agaagtgttt aaattgaata actttgccga tggtgaagga tttatgccgg actttatttt
     4201 attgctgaaa gataaacaaa aatcttcttc caatggtgtg aacgactttt tgcattacca
     4261 aattttcatt gagcccaaag gtgagcattt agtggaaact gatggatgga aagaagaatt
     4321 tttagaagcc atcactgtgg aatatgggat ggataagatc ctgcaaaaag atacaccgca
     4381 ttatcgtttg atcggtttac cgttttttac tgatcatcag aaaaatggac aatttacgga
     4441 gtcattccct ttaggtgcgg catcgcttga aaaaatgaag tagtgcattg caggcaaccc
     4501 cgtttgacaa aacttccttt acaaaagggc gttttgtcag atatttaatc aacacattat
     4561 taaaatacag ccaaatttta atgccgtccg aaccctgtgt tcagacggca tcgtattttt
     4621 cagtatctaa accgtttccc tgccccaatc tttgcctctc aaaatcgaag catcgacatc
     4681 ttgaatatcg cggtgtcccg taaacgccat agatatatcc atttctttat acaggatttc
     4741 cagcgcacgg gttacgcctt cttcaccata cgcacccaaa ccatacagaa acgcccggcc
     4801 tatcatcgta cctttcgcgc ccaaagccca cgccttcaaa atatcctgac cgctgcggat
     4861 accgctgtcc atccaaactt cgatgtcgct gcccactgcg ctgacgatgt cgggcaaggc
     4921 tttgatggca gacacggtat cgtcgagctg tcggccgccg tggttggaaa caatcaatgc
     4981 gtccgcgccg cttttcgctg ctttttccgc gtcttcgggt tccataatgc ctttgataat
     5041 cagcttgccg ccccacaaat ctttaatacg cgccacatcg tcccagctca ggcgcgggtc
     5101 gaattgttcg gaagtccatg aagacagcga agacaaatcg ccgacgttct tcgcgtgtcc
     5161 gacgatattg cggaacgtgc ggcgttccgt gttcagcatt ttcatgcacc attccggttt
     5221 ggtcgccaga ttgattaaat tggcgatggt cggtttcggc ggcgcggaca ggccgttttt
     5281 gatgtctttg tggcgttgcc ccaaaacctg caaatcggcg gtcaaaacca atgccgaaca
     5341 tttggcatcc ttcgcgcgct taatcaggtt ttccataaat tcgcggtcgc gcatcacata
     5401 aagctgaaac caaaacggcg cgctggtgtt ctcggcaacg tcttcaatcg agcagatgga
     5461 catggtggac aacgtaaacg gaataccgaa cttctccgcc gcccgcgccg ccaaaatttc
     5521 gccgtctgcg tgtgccatgc cggtaaaacc cgtcggcgca atcgccaccg gcattttcac
     5581 atcctgcccg atcattttag tctcaaggct gcgtccctcc atattgacca atactttttg
     5641 acggaagcgg atgtctttga aatccgaagt attttcccga taagtcgttt ccgtccacga
     5701 acccgaatcg atgtaatcgt aaaacatacg cggcattttg cgcttggcaa cgcggcgcaa
     5761 gtcttcgatg caggtcattt tgctcaaatc acgtttcatc ttgtttttcc ctgtttgaca
     5821 gcctgatgga atatgccgtc cgaaaccgct tgagccttca aacggcattt caggcaatac
     5881 ccaaataaat cactaagatt tagataatct atatcagtat caaaaataaa tcaaatcgtt
     5941 ttgaaaccgc ttgccggcaa aataccccga ccgccgctcc tcaaaaaaca taaccaactg
     6001 atttaaaaaa ccaaacaaat aaagtaaaat cagactatac cgccatttaa acaaacaatc
     6061 ggcaacagct cccccttact tgactgaaac actcagatat tggacaattc tccccactat
     6121 aaaaaagccg acacgggcaa ccaccaccat gagactgacc accaaagggc gttttgccgt
     6181 taccgctatg ctggatttgg cgatgaacgc gcaaaccggc gccgtcaaac tcagtgccat
     6241 cagcgaacgc caaaacatat ccctctccta tctcgagcaa ttgttcggca aactccgccg
     6301 cgccggactg gttgaaagcc tgcgcgggcc cggcggcggc tacatcctcg ccgcaccggc
     6361 ggcacgcatc aacatcgccc aaatcatcgc cgccgccgaa gaccggctgg acgcgaccca
     6421 atgcggcagc aaagccaact gccaccacgg tgcgccctgc ctgacgcacg acctttggga
     6481 gaatttaaac aaaaccatca acgactacct cggcagcgtt accctgcaaa gcatcatcga
     6541 acagaaaaac aacagcgacg gcagccgcgt cgtccaattt acacacatcc attaaataac
     6601 acccgaaaaa gaaagagcaa accatgaccg tcaaaacccc cgtttacctc gactacgccg
     6661 ccaccaccac cgttgacaaa cgcgttgccg aaaaaatgat tccctatctg accgaaacct
     6721 tcggcaaccc cgcctccaac agccacgcat tcggctggga agcagaagag gccgtcgaaa
     6781 aagcccgcgc cgacatcgct gccctgatta atgccgaccc caaagaaatc gtcttcacca
     6841 gcggcgcgac cgagtccgac aacctcgcca tcaaaggcgc ggcaaacttc tacaaaacca
     6901 aaggcaaaca cctcattacc gtcaaaaccg aacataaagc cgttttagat acaatgcgcg
     6961 aactcgaacg ccaaggtttt gaagtaacct acctcggcgt tcaagaaaac ggtttgattg
     7021 atttggaaga actcaaagcc gccatccgcg acgacaccat cctcgtttcc gtaatgtggg
     7081 caaacaacga aatcggcgtg gtgcaagaca ttcccgccat cggcgaaatc tgccgcgaac
     7141 gcaaaatcgt cttccacgtc gatgccgccc aagcctgcgg caaagtgcct gtcgatgtcg
     7201 aagccgccaa aatcgacctg ctctcgatgt ccgcgcacaa agtgtacggc cccaaaggca
     7261 tcggcgcgct gtacgtccgc cgcaaacccc gcgtccgcct cgaagcccaa atgcacggcg
     7321 gcggccacga acgcggcttc cgcagcggca cattgccgac ccaccaaatc gtcggtatgg
     7381 gcgaagcctt ccgcattgcc aaagaagaat tggcacaaga cactgcgcac tacctgaaac
     7441 tgcgcgatat cttcctcaaa ggcatcgaag gcatcgaaga agtctacatc aacggcgacc
     7501 tcggacaccg cgccccgaac aacctgaacg tcagcttcaa cttcgtcgaa ggcgaaagcc
     7561 tgattatggc ggtgaaagaa ctcgccgtat ccagcggctc cgcctgcacc tccgcctcgc
     7621 tcgaacccag ctacgtcctg cgcgcgctcg gccgcaacga cgaactggcg cactcatccc
     7681 tgcgtatcac cttcggtcgc atgaccaccg aagaagaagt gcaattcgcc gccgaactga
     7741 ttaaatccaa aatcggcaaa ctgcgcgaac tgtcgccgct gtgggaaatg ttcaaagacg
     7801 ggattgattt gaactcgatt gaatgggcgg cgcattaatt tatgaattag tacgatgata
     7861 tgagtatagt agataagatt ttcaaatatt ctcgccacct cgattattga gatatagtga
     7921 acttcttatc tacggataaa atttttatag atagtttaat atttaaatag aacttaaaaa
     7981 attatgaaaa tagccaatgc attaattcac aatacagtcc gtattgaatg cctttcagca
     8041 gacggccaat ctatatcaac gggaacggca ttcttattcc ttttcgattt cgacaaaaca
     8101 ggggtaattc cagttcttgt aacaaataaa catgttgttt ttgtagagtc cgcaaaaaaa
     8161 atagctatta ctttgacaaa agatgaaaat ggctctccaa atcataaaga aaatataact
     8221 tttacaattg aagattttat acaaaattgt ttacctcatc ctgatgaaaa tattgatcta
     8281 tgcattgctc ctgttggaca tttttttaat cagctgatta atcataattt ctcgcctttt
     8341 ataaaaggaa taagagaatc tgatattatg caaactgaag aaatggatca attatcagct
     8401 ttcgaagaag tttttatgat aggctatcct aatggcttat gggactcaaa aaacaactta
     8461 ccaatattta gaacaggaat tactgctacc catccagcta ttgattttga agggaaaaaa
     8521 gaatttatga ttgatgttgc ctgtttccct ggttcaagcg gttctccggt gttcaaatat
     8581 atacctgctg ggttaagaaa aatagaaaac gatgggtttg caattacagc agatgaaaca
     8641 tttaaattaa tgggaatcct atatgctgga cctcagcaaa caatatcagg ggaaatttat
     8701 ataacaactg ttaataaacc aatttctgta tcttctattc ctattaattt aggttttgtc
     8761 ataaaggcag aaaaactttt agactttaaa ccaattttaa agaatttttt ggaaaaaaat
     8821 agagaatgaa attatattaa aagattaata aatattagag actggcaatc caccttacct
     8881 aatctacatt aaaaataaaa aagaccgttt gaaacatcaa aaagattttt tcaaacgacc
     8941 taaaagccac cacatgaaat caaggataca aaaccatgaa cgaacaagaa cttgacctcg
     9001 acaatctcga caacctgctt gacgattttg acggcgttac cgtcgaaggc ggcgtcgatt
     9061 cggaaaacga cgaaggctgc gaaggcggcg cgtgcaaaat ctgactcagg ccgtctgaaa
     9121 accggcaaac aaaccacttt aaactatcaa aaacattaag gaaaccacat catggcatac
     9181 agcgataaag taatcgacca ctacgaaaat ccccgcaacg tcggtacttt cgacaaaaac
     9241 gacgaatctg tcggcaccgg catggtcggc gcgcccgcct gcggcgacgt catgcgcctg
     9301 caaatcaaag tgaacgacga gggcatcatc gaagatgcga aatttaaaac ttacggctgc
     9361 ggctcggcca tcgcttcgtc cagcctgatt accgagtggg ttaaaggcaa aagcctggat
     9421 gacgcgctgg caatcaaaaa cagcgaaatc gccgaggagt tggaattgcc gccggtaaaa
     9481 atccactgct ccatcttggc tgaagatgcg gtaaaagcgg ccgttgccga ctaccgcaaa
     9541 cgtcaggaaa acagataaag cccttcagac ggcatcatcc cgcaatgccg tccgaaccac
     9601 ccgccgcttc aggtccgtcc ggggcggtac aacaaggaag aaatatgatt acccttaccg
     9661 agaatgccgc aaaacacatc aatgactatc tcgccaaacg cggcaaaggc ttgggcgtac
     9721 gcttgggtgt gaaaaccagc ggctgctcgg ggatggcgta caaccttgaa tttgtcgacg
     9781 aagccgatgg cgacgacctg attttcgaag gacacggcgc gcgcatttat atcgatccga
     9841 aaagcctggt ttatctggat ggcacgcaag tcgattacac caaagaaggt ttgcaggaag
     9901 gtttcaaatt tgaaaacccc aatgtcaaag actcctgcgg ctgcggcgaa agcttccacg
     9961 tttaaggcat aaaaacggcg ggaccgtatc aaaaccgtcc cgccattttt tcgcttcctg
    10021 cctgttgtag ctgcctttgc ctttcctttt ccgttccacc ttgtgccgga acaaatcgga
    10081 tttcactaag gcttttaaag cattgtcgcg tattttgcct ttattgtgct gcactttgcc
    10141 gcccatattc agtcctttcg tttaagaagc ggcagattat aaggcaaaaa cagttttctg
    10201 ccaaaatctt acatttatca tcctactatg tcccaatatt tcaccctctt ccggattgaa
    10261 cccgctttcg atatcgacac cgaaaacttg gaacaaacct accgcgcctt ggccgcccgt
    10321 ttccatcccg ataaattcgc ttcagcttcc gcctttgagc aaaagcaggc agtgatgatg
    10381 tcttccacca tcaacgatgc ctaccgcacc ttgaaaaacc ccatcgaccg cgccgcctac
    10441 ctgctgaaaa catcgggcat cgatgccgac gcgccggagc ataccgcttt cgcccccgaa
    10501 ttccttatgc agcaaatgga atggcgcgaa acgctgatgg aggcacgggc aggcaacgac
    10561 cttgaatcct tgaaaaatct cgacaacgaa atccgcgacg agcaagaaaa actgttctgc
    10621 ggtctgaaac agtcgtttgc ccgacaagat tacgacacag ccgcacaaca agtccgccaa
    10681 ggcaggtttc tcgacaaact ccgcaacgaa atttcctcgg cattataatc cgcaccgtgt
    10741 ttcagacggc gtaaccgccg caccgttccg cgtcaaaata tgctaaaata agcaacaatt
    10801 ttttgccata cgaaacattg aaaccatgac cgacgcaacc atccgccacg accacaaatt
    10861 cgccctcgaa accctgccgg taagccttga agacgaaatg cgcaaaagct atctcgacta
    10921 cgccatgagc gtcattgtcg ggcgcgcgct gccggacgtt cgcgacggtc tcaagccggt
    10981 acaccgccgc gtactgtacg cgatgcacga attgaaaaac aactggaatg ccgcctacaa
    11041 aaaatcggcg cgcattgtcg gcgacgtcat cggtaaatac cacccccacg gcgataccgc
    11101 cgtatacgac accatcgtcc gtatggcgca aaatttcgct atgcgttatg tgctgataga
    11161 cggacagggc aacttcggat cggtggacgg gcttgccgcc gcagccatgc gctacaccga
    11221 aatccgcatg gcgaaaattt cccacgaaat gctggcagac attgaggaag aaaccgtcaa
    11281 tttcggcccg aactacgacg gtagcgaaca cgagccgctt gtactgccga cccgtttccc
    11341 cacactgctc gtcaacggct cgtccggcat cgccgtcggc atggcgacca atatcccgcc
    11401 gcacaacctt tccgataccg tcaatgcctg cctgcgcctg ctcgatgcac ccgacaccga
    11461 aatcgacgaa ctgatcgaca ttatccaagc ccccgacttc ccgaccgggg caaccatcta
    11521 cggcttgagc ggcgtgcgcg aaggctataa aacaggccgc ggccgcgtcg ttatgcgcgg
    11581 taagacccat atcgaaccca taggcagaaa cggcgaacgc gaagccatcg ttatcgacga
    11641 aatcccctat caggtcaaca aagccaagct ggtcgagaaa atcggcgatt tggttcggga
    11701 aaaaacactg gaaggcattt ccgagctccg cgacgaatcc gacaaatccg gtatgcgcgt
    11761 cgttatcgag ctgaaacgca acgaaaatgc cgaagtcgtc ttaaaccaac tctacaaact
    11821 gactccgctg caagacagtt tcggcatcaa tatggtggtt ttggtcgacg gacaaccgcg
    11881 cctgttgaac ctgaaacaga ttctctccga attcctgcgc caccgccgcg aagtcgttac
    11941 ccgacgtacg cttttccggc tgaagaaggc acgccatgaa gggcatatcg ccgaaggcaa
    12001 agcggtcgca ctgtccaata tcgatgaaat catccggctt atcaaagaat cgcccaacgc
    12061 ggtcgaggcc aaagacaaac tgcttgcgca cccttggcgc agtagcctcg ttgaagaaat
    12121 gctgacgcgt tccggtctgg atttggaaat gatgcgtccg gaaggattgg ctgcaaacat
    12181 cggcttgaaa gagcaaggtt attacctgag cgagattcag gcagatgcta ttttacgcat
    12241 gagcctgcga aacctgaccg gcctcgatca agaagaaatt gtcgaaagct acaaaaacct
    12301 gatgggtaaa atcatcgact ttgtggatat cctctccaaa cccgaacgca ttacccaaat
    12361 catccgcgac gaactggaag aaatcaaaac caactatggc gacgaacgcc gcagcgaaat
    12421 caacccgttc ggtggcgaca ttgccgatga agacctgatt ccgcaacgcg aaatggtcgt
    12481 taccctgaca catggcggct atatcaaaac ccagccgacc accgactatc aggcgcagcg
    12541 tcgcggcggg cgcggcaaac aggcggctgc caccaaagac gaagacttta tcgaaaccct
    12601 gtttgttgcc aacacgcatg attatttgat gtgctttacc aatttgggca agtgtcattg
    12661 gattaaggtt tacaaactgc ccgaaggcgg acgcaacagc cgcggccgtc cgattaacaa
    12721 cgtcatccag ttggaagaag gcgaaaaagt cagcgcgatt ctggcagtac gcgagttccc
    12781 cgaagaccaa tacgtcttct tcgccaccgc gcagggaatg gtgaaaaaag tccaactttc
    12841 cgcctttaaa aacgtccgcg cccaaggcat taaagccatc gcgctcaaag aaggcgacta
    12901 cctcgtcggc gctgcgcaaa caggcggtgc ggacgacatc atgctgttct ccaacttagg
    12961 taaagccatc cgcttcaacg aatactggga aaaatccggc aacgacgaag cggaagatgc
    13021 cgacatcgaa accgaaattt cagacggcat cgaagatgaa accgccgaca gcgaaaacgc
    13081 actgccgagc ggcaaacacg gtgttcgccc gtccggtcgc ggcagcggcg gtttgcgcgg
    13141 tatgcgcctg cctgccgacg gcaaaatcgt cagcctgatt accttcgccc ctgaaaccga
    13201 agaaagcggt ttgcaagttt taaccgccac cgccaacgga tacggaaaac gcaccccgat
    13261 tgccgattac agccgcaaaa acaaaggcgg gcaaggcaat attgccatta acaccggcga
    13321 gcgaaacggc gatttggtcg ccgcaacctt ggtcggcgaa accgacgatt tgatgctgat
    13381 taccagcggc ggcgtactta tccgcaccaa agtcgaacaa atccgcgaaa ccggccgcgc
    13441 cgcagcaggc gtgaaactga ttaacttgga cgaaggcgaa accttggtat cgctggaacg
    13501 tgttgccgaa gacgaatccg aactctccga cgcttctgta atttccaatg taaccgaacc
    13561 ggaagtcgag aactgaaaat catctcccga tgccgtctga agattcagac ggcatttatt
    13621 ttatccctca tccgtcatcc ggcttctcac aatatagcgg attatagtca attaaaaaca
    13681 aggggctgtc ctagataact agggaaattc aaattaagtt agagttgccc ctatgagaaa
    13741 aagtcgtcta agccggtata aacaaataaa ctcattgaac tgtttgtcgc aggtgtaact
    13801 gcaagaacga cagcagagtt agtaggcgtt aataaaagta ccgcagccta ttattttcat
    13861 cgtttacgat tacttattta tcaaaacagt ccgcatttgg aaatgtttga tggcgaagta
    13921 gaagcagatg aaagttattt tgctgaacga caaaaccata ttaatggaat tgagaacttt
    13981 tggaaccggg caaaacatca tttacgcaag tttgacggca ttcccaaagc gcattttgag
    14041 ctgtatttaa aggggtacga acggcgtttt
//
LOCUS       DBBZXU010000049        13574 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.049, whole genome shotgun sequence.
ACCESSION   DBBZXU010000049 DBBZXU010000000
VERSION     DBBZXU010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13574)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13574)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13574
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.049"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(468..1280)
                     /gene="murI"
                     /locus_tag="ACJJDE_001221"
     CDS             complement(468..1280)
                     /gene="murI"
                     /locus_tag="ACJJDE_001221"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HGG7541150.1"
                     /translation="MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARV
                     PYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVIS
                     AGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGW
                     LEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAGNVALVDSAITTAEE
                     TARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG"
     gene            1482..1943
                     /gene="tsaE"
                     /locus_tag="ACJJDE_001222"
     CDS             1482..1943
                     /gene="tsaE"
                     /locus_tag="ACJJDE_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002949 - tRNA threonylcarbamoyladenosine
                     modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HGG7541151.1"
                     /translation="MSDLPSISRFLADEAATLDLGAAWSSRLNAPLVIYLEGDLGAGK
                     TTLTRGILRGLGHQGAVKSPTYAIVESYPLERFTLHHFDLYRFSFPEEWEDAGLDELF
                     AANSVCLIEWPQQGGEFTPPADITATLTHDGDGRKCLLTAHTERGRESLPL"
     gene            1940..3190
                     /locus_tag="ACJJDE_001223"
     CDS             1940..3190
                     /locus_tag="ACJJDE_001223"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0009253 - peptidoglycan catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7541152.1"
                     /translation="MTKLTRRQIIRRTAGTLFALSPIASAVAKTVRAPQFTAARIWPS
                     HTYTRLTLESTAALKYQHFALDNPSRLVVDIQNANINTVLHGLSQKVMADDPFIRSIR
                     AGQNTPTTVRLVIDLKQPTHAQVFSLSPVSGFKNRLVVDLYPQGMDPDDPMMALLNGS
                     LNKTRRGSPEADLAQNTPAQTERGKNGRRPVIMIDPGHGGEDPGAVSPGGLQEKHVVL
                     SIARETKKQLEALGYNVFMTRNEDVFIPLGVRVAKGRARRADVFVSIHADAFTSPSAR
                     GTGVYMLNTKGATSSAAKFLEQTQNNADAVGGVPTSGNRNVDTALLDMTQTATLRDSR
                     KLGKLVLEELGRLNHLHKGRVDEANFAVLRAPDMPSILVETAFLSNPAEEKLLGSESF
                     RRQCAQSIASGVQRYLNTSVLKRG"
     gene            complement(3248..4390)
                     /locus_tag="ACJJDE_001224"
     CDS             complement(3248..4390)
                     /locus_tag="ACJJDE_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HGG7541153.1"
                     /translation="MNTLYTLFATCPRGLETVLSQELESLGCTDVQVFDGGVSCRGGL
                     EQVYAANLHSRTASRILLRLTKGTYRNERNIYKLAKNINWFNWFTLQQTFKVKVEAKR
                     ANVKSIQFVGLTVKDAVCDAFRDIYDARPSVDKAAPDVRIHAFLDERNVEIFIDTSGE
                     ALFKRGYRLDTGEAPLRENLAAGLLLSAGYDGTQPFQDPFCGSGTIAIEAAWIAARRA
                     PGMMRRFGFEKLQNFDKTLWSDLRRRAEAQVKPAFAPISGSDSDRRIIQTALANARSA
                     GVDDIVSFSVADAQSVRPNGVGGIMVSNPPYGVRLEEVRALQALYPQLGTWLKKYYAG
                     WLAAMFTGDREMPKFMRLSPKRKIPLYNGNLDCRLFLIDMVEGSNR"
     gene            complement(4439..4861)
                     /locus_tag="ACJJDE_001225"
     CDS             complement(4439..4861)
                     /locus_tag="ACJJDE_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541154.1"
                     /translation="MNKNRKLLLAALLLIAFAAVKLVLLQWWQAQQPQAVAAQCDLTE
                     GCTLPDGSRVRAAAVSTKKPFDIYIEHAPAGTEQVSISFSMKNMDMGFNRYMFERQPS
                     GTWQAVRIRLPICVEGRRDFTADITIGSRTFQTAFTAE"
     gene            complement(4854..5663)
                     /locus_tag="ACJJDE_001226"
     CDS             complement(4854..5663)
                     /locus_tag="ACJJDE_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7541155.1"
                     /translation="MIQDTRPLIRVVAGILLDSDGNYLLSSRPEGKPYAGYWEFAGGK
                     VEAGETDFQALQREFEEELGIRILAATPWLTKIHSYEHARVCLKFLWVNPDQWTGEPQ
                     SREGQEWSWQKAGDFTVAPMLPANGALLRSLSVPRRLYGSLKTGLHGENSMGAYRVLP
                     LGSAEGSGANVLMEAAQWQDRPEYAGSVWMMVQTREQWRQAQEKGADVVVWRVGNAAQ
                     AAAVDEVLKHGVSVPLVLAANGQTVARYGKLWLGLGAHVVVRDETIGKNHE"
     gene            complement(5745..6122)
                     /gene="acpS"
                     /locus_tag="ACJJDE_001227"
     CDS             complement(5745..6122)
                     /gene="acpS"
                     /locus_tag="ACJJDE_001227"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HGG7541156.1"
                     /translation="MIYGIGTDIVSLKRIIRLNKKFGQAFAGRILTPEELLEFPQAGK
                     PVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYGPALSKWLEEQG
                     ISRVSLSMSDEEDTVLAFVVAEK"
     gene            complement(6322..7089)
                     /locus_tag="ACJJDE_001228"
     CDS             complement(6322..7089)
                     /locus_tag="ACJJDE_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013107841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HGG7541157.1"
                     /translation="MQEIMQSIVFVAAAILHGITGMGFPMLGTTALAFIMPLSKVVAL
                     VALPSLLMSLLVLCSNNKKGFWQEIVYYLKTYKLLAIGSVVGSILGVKLLLILPVSWL
                     LLLMAIITLYYSVNGILNVCAKAKNIQVVANNKNMVLFGFLAGIIGGSTNAMSPILLI
                     FLLSETENKNRIVKSSNLCYLLAKIVQIYMLRDQYWLLNKSEYGLIFLLSVLSVIGLY
                     VGIRLRTKISPNFFKMLIFIVLLVLALKIGHSGLIKL"
     gene            complement(7099..7638)
                     /locus_tag="ACJJDE_001229"
                     /pseudo
     CDS             complement(7099..7638)
                     /locus_tag="ACJJDE_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
     gene            complement(7810..8031)
                     /locus_tag="ACJJDE_001230"
                     /pseudo
     CDS             complement(7810..8031)
                     /locus_tag="ACJJDE_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261815.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="taurine catabolism dioxygenase TauD"
     gene            complement(8030..8137)
                     /locus_tag="ACJJDE_001231"
                     /pseudo
     CDS             complement(8030..8137)
                     /locus_tag="ACJJDE_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(8183..8911)
                     /gene="pdxJ"
                     /locus_tag="ACJJDE_001232"
     CDS             complement(8183..8911)
                     /gene="pdxJ"
                     /locus_tag="ACJJDE_001232"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HGG7541158.1"
                     /translation="MLLGVNIDHIATVRNARGTTYPSPVEAALVAETHGADLITMHLR
                     EDRRHIKDADVFAVKNAIRTRLNLEMALTEEMLENALKVMPEDVCIVPEKRQEITTEG
                     GLDVLAQQEKIAGFTKILTDAGIRVSLFIDADDRQIQAAYDVGAPVVELHTGAYADAR
                     SHAEQLKQFERLQNGAHFAGDLGLVVNAGHGLTIHNVTPIAQILAIRELNIGHSLIAQ
                     ALFLGLPEAVRQMKEAMFRARLLP"
     gene            complement(8935..9726)
                     /gene="recO"
                     /locus_tag="ACJJDE_001233"
     CDS             complement(8935..9726)
                     /gene="recO"
                     /locus_tag="ACJJDE_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HGG7541159.1"
                     /translation="MSEHRVNHEPVFLLASSPWRESSLRVEAFSRRYGRVALLARSAR
                     KRQSELRGVLVSFVPVSASWYGSQELKTLHRAEWVGGWRQPQGRALFSGLYVNELVLK
                     LTAREDPMPELYDALAKVMEAVCREANHIADLRRFEWKLLNALGVAPDLHADGTGGDI
                     LADKTYRLMPEEAVMPVCRDTDALSHEAGAIVEGQSLIDLREGSFRTAESLQQALKIT
                     RLFIRHLLPEGLKSRQVLEQIRQFDRKETARETVPTSDGTASNAV"
     gene            complement(9760..10887)
                     /gene="pheA"
                     /locus_tag="ACJJDE_001234"
     CDS             complement(9760..10887)
                     /gene="pheA"
                     /locus_tag="ACJJDE_001234"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HGG7541160.1"
                     /translation="MLECTANHRSGEIMSQTIDELLLPHRNAIDTIDAEILRLLNERA
                     QHAHAIGELKGTGAVYRPEREVAVLRRIQDLNKGPLPDESVARLFREVMSECLAVERP
                     LTIAYLGPQGTFTQQAAIKHFGHAAHTMACPTIDNCFKQVETRQADYLVAPVENSTEG
                     SVGRTLDLLAVTALQACGEVVLRIHHNLLRKNNGSTEGIAKVFSHAQALAQCNDWLGR
                     HLPNAERIAVSSNAEAARLVAESDDGTVAAIAGRTAAEIYGLDMVAECIEDEPNNTTR
                     FLVMGHHETGASGSDKTSLAVSAPNRAGAVASLLQPLTESGISMTKFESRPSKSVLWE
                     YLFFIDIEGHRRDAQIQTALERLGERASFVKVIGSYPTAVL"
     gene            complement(10926..12158)
                     /locus_tag="ACJJDE_001235"
     CDS             complement(10926..12158)
                     /locus_tag="ACJJDE_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HGG7541161.1"
                     /translation="MPSAHYPEMSEKLMAVLMAMLVTLMPFSIDAYLPAIPEMAQSLN
                     ADVHRIEQSLSLFMFGTAFGQVVGGSVSDIKGRKPVALTGLAVYCLAVAAIVFASSAE
                     QLLNLRVVQAFGAGMTVVIVGAMVRDYYSGRKAAQMFALIGIILMVVPLVAPMVGALL
                     QGLGGWQAIFVFLAAYSLVLLGLVQYFLPKPAVGGKIGRDVFGLVAGRFKRVLKTRAA
                     MGYLFFQAFSFGSMFAFLTESSFVYQQLYRVTPHQYAWAFALNIITMMFFNRVTAWRL
                     KTGVHPQSILLWGIVVQFAANLSQLAAVLFFGLPPFWLLVACVMFSVGTQGLVGANTQ
                     ACFMSYFKEEGGSANAVLGVFQSLIGAGVGMAATFLHDGSATVMAATMTASTSCGIAL
                     LWLCSHRAWKENEQSEYL"
     gene            complement(12677..13531)
                     /locus_tag="ACJJDE_001236"
     CDS             complement(12677..13531)
                     /locus_tag="ACJJDE_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7541162.1"
                     /translation="MFYQILALIIWSSSFIAAKYVYGGIDPALMVGVRLLIAALPALP
                     ACRRHVGKIPREEWKPLLIVSFVNYVLTLLLQFVGLKYTSAASASVIVGLEPLLMVFV
                     GHFFFNDKARAYHWICGAAAFAGVALLMAGGAEEGGEVGWFGCLLVLLAGAGFCAAMR
                     PTQRLIARIGAPAFTSVSIAAASLMCLPFSLALAQSYTVDWNVGMVLSLLYLGLGCGW
                     YAYWLWNKGMSRVPANVSGLLISLEPVVGVLLAVLILGEHLSPVSALGVFVVIAATLV
                     AGRLSHQK"
BASE COUNT         3226 a         3798 c         3460 g         3090 t
ORIGIN      
        1 tcccacgaaa gtgggaatcc agttttttga gtttcagtca ttcccgataa attgcctcag
       61 cattgaatgt ctagattccc gcctgcgcgg gaatgacgaa tccatccata cggaaacctg
      121 caccacgtca ttcccacgaa cctgcaccac gtcattccca cgaacctaca ttccgtcatt
      181 cccacgaaag tgggaatcca gttcgttcgg tttcgcttgt tttaagtttc gggtaacttc
      241 cacttcgtca ttcccgcgca ggcgggaatc cagttttttg agtttcagct atttagaata
      301 aattttgaaa ctctaatcgc gtcattccca caaaagtggg aatccagttt tttgagtttc
      361 agtcattccc gataaattgc cttagcattg aatgtctgga ttcccgcctg cgcgggaatg
      421 acgggatttt aggtttctgt aatctcgggc agctttccgt catcgtttta acccaaagac
      481 accatttcaa tctgctccat cgtcctgccc agaaaacgct cgccgatggt tctgaatttc
      541 aaaggaatat cgctgacgta aaaacggtag tcgggattgt tgttgtcggt attgagcaat
      601 ccttcctgag caaggacgcg tgcggtttct tcggccgttg taattgcaga atcaaccaac
      661 gcgacattgc ccgcctccct gccgattaag ggcttgagca agggaaagtg cgtgcagccc
      721 aacaccagcg tatcgatgcc gtctgcaagc aatggtttga ggtattcgca tacggtcagg
      781 cgggtaactt cgtgttccaa ccagccctct tccaccaaag ggacgagcag cggcgcggcc
      841 tgcgtgcgga cgagcgtatc ggggttgttc ctgtggatgg cgcgcgcata agcattgctg
      901 ttaactgtgg tattggtggc gataatgccg attttattgt tgcgcgtcgt tgccagcgcg
      961 gctttcgcgc cggcggaaat cacgtccaac acaggcatat tgcccgtctt ttgacggatt
     1021 ttctgccccg ccaccgccgc aatcgtattg cacgcgataa ccatcgcctt aacatcgtgt
     1081 tccaataaaa aatcgacaat ctgcatcgag aaattttcga tggtagcctt agatttcgtc
     1141 ccgtaaggca cgcgcgccgt gtcgccgaaa taaatgatgt tctccatcgg cagccgctcc
     1201 atcagcgcgc gtacattggt caaaccgccg attcccgagt caaaaacgcc gatgggtcgc
     1261 tgcctgccga tattttccat cctttttcca atccgtccta aacatacaat ccgcgtattg
     1321 tacacgcgcc gctttttctt gacagccgtt gccgtctgaa agcagaacgc ggatttggct
     1381 gttataatgc tcggacaaga agcatccgcc cctcgggtgc aaagtttgca aaacctgcaa
     1441 aactgcccat aataccctag accttacaac aaaccgtttc catgtctgat ttaccctcta
     1501 tctcccgatt ccttgccgac gaagccgcca cactcgattt gggcgcggcg tggtcttccc
     1561 gtttaaacgc accgctggtc atttatctcg aaggggattt gggtgcgggc aaaaccacgc
     1621 tgacacgcgg catcctgcgc ggattgggtc atcagggcgc agtcaaaagc ccgacctacg
     1681 ccatcgtcga atcttatccg ctggaacgct tcaccttgca ccatttcgac ctctaccgct
     1741 tctcgttccc cgaagaatgg gaagatgccg gattggacga actgtttgcc gcaaacagcg
     1801 tctgcctgat cgaatggccg caacagggcg gggaatttac gccgcctgcc gacatcaccg
     1861 caacattgac acacgacggc gacggcagaa aatgcctgct gaccgcccat accgaacgag
     1921 gacgcgaaag cctgccgcta tgaccaaact gacacgaaga caaatcatcc gccgcaccgc
     1981 cggcacactg ttcgccctaa gccccatcgc atccgccgtt gccaaaacgg tacgcgcacc
     2041 acaattcact gccgcacgga tatggccatc gcacacctac acccgcctga cgctggaaag
     2101 caccgccgcg ctcaaatacc agcacttcgc gctcgacaac ccaagcaggc tggtcgtcga
     2161 tatacaaaac gcgaacatca ataccgtatt gcacggactg tctcagaagg ttatggcgga
     2221 cgaccccttt atccgcagca tacgcgcggg tcagaacaca ccgaccaccg tccgcctcgt
     2281 catcgacctg aaacagccca cccacgcaca agtcttttcc ctctctcctg tcagcggctt
     2341 taagaaccgc ctcgtcgtcg atctctatcc gcaagggatg gatcccgacg atccgatgat
     2401 ggcgctgctt aacggcagcc tgaacaaaac ccgtcgcggc tcccctgaag ccgacctcgc
     2461 tcaaaacact cccgcacaaa ccgaacgcgg caaaaacggg cgcagacccg tcattatgat
     2521 cgaccccgga cacggcggcg aagaccccgg cgccgtcagc ccgggcggtt tgcaggaaaa
     2581 acacgtcgtc ctctccatcg cccgcgaaac caaaaaacaa ttggaagcct tgggttacaa
     2641 cgtctttatg acgcgcaacg aagacgtgtt catcccattg ggcgtgcgtg tcgccaaagg
     2701 gcgcgcacgg cgggcggacg tattcgtctc catccacgcc gacgctttca ccagcccctc
     2761 cgcgcgcgga acgggggttt atatgctgaa caccaaaggc gcgaccagct ctgccgccaa
     2821 attcttggaa caaacccaaa ataatgccga cgcggtcggc ggcgtaccga ccagcggcaa
     2881 ccgcaatgtc gataccgccc tgctcgacat gacccaaacc gccacgctgc gcgacagccg
     2941 caaactcggc aaactggtgc ttgaagaatt gggcaggctc aaccatctgc acaaaggcag
     3001 ggtggacgaa gccaatttcg ccgttttgcg cgcacccgat atgccgtcta tcctggtcga
     3061 aaccgccttc ctgtccaatc ctgccgaaga gaagctgctg ggcagcgaat ccttccgccg
     3121 gcagtgcgcc caatccatcg cctcgggtgt ccaacgctac ctcaatacat ccgtattgaa
     3181 gcggggttga ttccgaaaaa taaatgccgt ctgaacattt ttcagacggc atttttgtac
     3241 actttcctca acggttcgat ccttccacca tatcaatcag gaacaggcgg caatcgaggt
     3301 tgccgttata aagcggaatt ttgcgttttg gcgacaggcg catgaatttg ggcatttccc
     3361 gatctccggt aaacattgcc gccaaccagc ctgcgtaata tttcttcaac cacgtcccca
     3421 actgcggata aagcgcctgc aaggcgcgga cttcctcaag gcgcacgccg tagggcggat
     3481 tggacaccat aatgccgccc acgccgttcg gacggacgga ttgcgcgtcg gcaacgctga
     3541 aggaaacgat gtcgtccacc ccggcactgc gtgcgttggc caatgccgtc tgaatgatgc
     3601 ggcggtcgct gtcgctgccc gaaatcggtg caaaagccgg tttaacctgc gcttcggcac
     3661 ggcggcgcaa atccgaccac agcgttttat cgaaattttg cagtttttca aaaccgaaac
     3721 ggcgcatcat acccggcgcg cggcgggcgg caatccaagc ggcttcgata gcaatcgtgc
     3781 cgctgccgca aaacgggtct tgaaacggct gcgtgccgtc gtagcctgcc gagagcagca
     3841 atccggcggc aaggttttcg cgcagcgggg cttcgccggt atcgagacgg tagccgcgtt
     3901 tgaacagggc ttcgcccgaa gtgtcgatga agatttcgac attgcgttcg tccaaaaagg
     3961 cgtggatgcg aacatcgggc gcggctttgt ccacgctcgg acgtgcgtcg taaatgtcgc
     4021 ggaaagcgtc gcagacggca tctttgacgg tcagtccgac aaattggatg ctcttaacgt
     4081 tggcacgctt tgcctcgact ttgactttga acgtctgctg taaagtaaac caattaaacc
     4141 agttgatatt tttggcgagt ttgtagatgt tgcgctcatt gcggtatgtc cctttggtca
     4201 ggcgcagcag gatacggctg gcagtacgcg aatgcaggtt ggcggcgtaa acctgttcca
     4261 atccgccccg gcaggaaacg ccgccgtcaa acacttgtac atcggtacag ccgaggcttt
     4321 cgagttcttg agataaaacg gtctccaagc cgcgcgggca ggtggcgaaa agtgtatata
     4381 aagtattcat aacgtgtcct ttccggacgg atgttccggc aatggcggat tgaaaggttt
     4441 attcggcggt aaatgccgtc tgaaatgtcc gactgccgat tgtaatgtct gccgtaaaat
     4501 cgcgcctgcc ttcgacacag atgggcaggc ggatgcgtac tgcctgccaa gtccccgacg
     4561 gttgccgctc gaacatatag cggttgaaac ccatatccat atttttcata ctgaagctga
     4621 tgctgacctg ttccgtgccg gcgggcgcgt gttcgatata aatatcaaac ggttttttgg
     4681 ttgaaacggc ggcggcgcgg acgcggcttc cgtccggcag cgtgcaaccc tcggtcaaat
     4741 cgcattgcgc cgccacagct tgcggctgct gcgcctgcca ccattgcaac aaaacgagct
     4801 tgacggcggc aaaggcaatc agcagcagtg cggcaagcag taatttacgg tttttattca
     4861 tgattcttcc ctattgtttc atcccttacc accacgtgcg cccccaatcc gagccatagt
     4921 tttccataac gtgcaaccgt ctgtccgttt gctgcaagta cgagcggcac ggatacgccg
     4981 tgcttcaaca cttcgtctac cgctgcggct tgtgcggcat taccgactcg ccagacgacc
     5041 acatccgcgc ccttttcctg cgcctgccgc cattgttcgc gggtctgcac catcatccac
     5101 acgctgccgg cgtattcggg tctgtcctgc cattgcgccg cctccatcaa aacgttcgca
     5161 ccgcttccct ctgccgaacc caaaggcagg acgcggtacg cgcccatact gttttctccg
     5221 tgcaaacccg ttttcaggct gccgtacaaa cggcgcggga cggacagcga acgcaaaagc
     5281 gcgccgttgg cgggcagcat gggggcaacg gtaaaatcac ccgccttctg ccaagaccat
     5341 tcctgccctt cgcgggattg cggttcgccc gtccattggt cggggttgac ccataggaat
     5401 ttcaggcaga cgcgggcgtg ttcgtaggaa tggattttgg tcaaccaagg cgtggcggcg
     5461 aggatgcgga tgccgagttc ttcttcaaac tcgcgttgca gggcttggaa gtcggtttcg
     5521 cccgcttcga ccttgccgcc ggcaaattcc caatatccgg catagggttt gccttcgggg
     5581 cgcgagctga gcaggtagtt gccgtctgaa tcgagcagga tgccggcaac gacgcggata
     5641 agggggcggg tgtcttgaat catggcgggt acgcggttgg tcggtcggag tgcaaatgag
     5701 ggatgggcaa tgccgtcaac gggttttccg catttcagac ggcattattt ttcggcaacg
     5761 acaaacgcca atacggtgtc ttcttcgtcg ctcatgctga ggctgacgcg gctgatgcct
     5821 tgttcctcca gccatttgga cagggcgggg ccgtagaaaa attcgggctt gcccaatgcg
     5881 tcatgcccga tgccgatgtt gcggaaggaa accgcgccgc gtatgcccgt gccgacggct
     5941 ttggcgaagg cttctttggc ggcaaagcgt ttggcgaggt agttgacggg tttgcccgct
     6001 tgcggaaatt caagcagctc ttccggagtg aggatgcgcc cggcaaacgc ctgtccgaat
     6061 tttttgttta agcggatgat gcgcttgagg gaaacaatgt ctgtgccgat gccgtaaatc
     6121 atatttgcgc tccttcgccc ttggttgcgg gtagtgatga atgtgatgat gaatgccgtc
     6181 aatttcttgg ggcgttaaaa tggcgtgaat atccactttt ggggttttgt cggtaacaat
     6241 tttcactgta accttttgca tttgaaattc taaaacatcg tgccaattat ttaataagga
     6301 gttaaggcat ttaataatga attaaagttt gattaaaccc gaatgcccga ttttcagagc
     6361 caataccaat aaaacaataa aaattaacat tttaaaaaaa tttgggctaa tcttagtcct
     6421 taaccgaatt ccaacataca atccaataac agacaatacg gacagtaaaa atattaaacc
     6481 gtattcactc ttatttaata accaatactg gtctcttagc atatatattt gaacaatttt
     6541 cgccaaaaga tagcatagat tgcttgattt tacgatacga tttttatttt ctgtttcgct
     6601 aagcaaaaat attaacaata tgggagacat ggcattggtt gaaccgccga tgatgcctgc
     6661 caaaaaccca aaaagaacca tattcttatt attggcaact acttgaatat tttttgcttt
     6721 tgcacataca tttaaaatac cattgacaga ataatacaat gtaatgattg ccatcagtaa
     6781 aagcagccaa gacactggaa gtatcaaaag caacttcacc cccaaaatgc tgccaacgac
     6841 gctgccgata gcaagcaatt tataggtttt taaataataa acaatctctt gccaaaaacc
     6901 ctttttgtta ttgctgcata gaaccaacaa gctcattaac aggcttggta atgccaccaa
     6961 ggcaacaacc ttagacaatg gcatgataaa agccaatgcg gttgtaccga gcatcggaaa
     7021 tcccatgcct gtaattccgt gcagtattgc ggcagcaaca aaaacgatag attgcattat
     7081 ttcttgcata accgtccttt atacagtaat tcttgctcta atataatgcc tgtttttatc
     7141 cgtataatca gttctggcat gcaagccatt gacattgtca ataataatca aaccatcatc
     7201 ttgtgcagaa aattcttgaa tatcactcgc attttttata acatttacaa gataatcaag
     7261 tgcaagtacc atttcctttg atactttatt tctattttct tcaatacctt tatagataca
     7321 atcacttcta aatctaatca tttgagtatt gaccgataag atattacccc atctcacacc
     7381 ttgtttttta tcaaatgatg ctggtgtttt aaatggatat aaattgcccg ttaatgtttt
     7441 taagtgtttt ttaccggttt ctgttttaga taactgattg acaatatctg atgaacttaa
     7501 aaatagggaa ttacctccat cattggctga ttttactaca tacataacca aataactttc
     7561 cgggttttca ctaaaagatg aatcactatg aagtggacat tctccaacat cttccgagaa
     7621 agttatatca ttatttatag tggattaaca aaaaccagta cggcgttgcc tcgccttagc
     7681 tcaaagagaa cgattctcta aggtgctgaa gcaccaagtg aatcggttcc gtactatctg
     7741 tactgtctgc agcttcgtcg ccttgtcctg atttttgtta atccactata ttacataatc
     7801 atcgcctcaa tatttaatat cccaaaatat agatttaaaa ccatcgcctt tgtggtttgt
     7861 cagcattcct aattgagata gaaagtcaaa taatttcttg tttctccggc tgccatcaag
     7921 atggtttaga ttaagaccgc gaacaataca ataaccaata cgctgtactg tattgtgaat
     7981 ttcttctatc aaactattat tgtttgcaga taaaatatac ttttgattca tatagtgaat
     8041 taaatttaaa ccagtacggc gttggcttgc cttgccgtac tatttgtact gtctgcggct
     8101 tcgccgcctt gtcctgattt aaatttaatc cactataaca tatccctgtc gtgaaatgct
     8161 gtctgaaagg gtttgcctgc ccttacggca gcagccttgc cctgaacatc gcctccttca
     8221 tctggcgcac ggcttcgggc agtccgagga agagggcttg ggcaatcagc gaatgcccga
     8281 tgttcagttc gcggatggcg aggatttggg cgatgggggt aacgttgtgt atggtcagtc
     8341 cgtgtccggc gttgacgacc aagcccaaat cgccggcaaa atgcgcgccg ttttgcagac
     8401 gctcgaattg cttgagttgt tcggcgtggc tgcgcgcgtc ggcatacgcg ccggtgtgca
     8461 gctcgacaac gggcgcgccg acatcatagg cggcttggat ttgcctgtcg tcggcatcga
     8521 taaagagaga gactcggatg cctgcgtcgg tcaggatttt ggtgaacccg gcgatttttt
     8581 cctgttgcgc caatacgtcc aagccgcctt cggtcgtgat ttcctgacgt ttttcaggca
     8641 cgatgcacac gtcttccggc atcactttaa gcgcgttttc gagcatttct tccgtcaacg
     8701 ccatttcaag gttcaggcgc gtgcggatgg cgtttttgac ggcaaacaca tccgcgtctt
     8761 tgatgtggcg gcggtcttcg cgcaggtgca tggtaatcaa atccgcaccg tgcgtttcgg
     8821 caaccagtgc cgcctccacg gggctgggat aagtcgtgcc gcgcgcattg cggacggtag
     8881 cgatgtggtc gatgttgaca cctaaaagca taatctttcc ttttatttct gccttcagac
     8941 ggcatttgaa gccgtgccgt ccgaagtcgg gacggtttcc cgggcggttt ctttgcggtc
     9001 aaactgccgt atctgttcca acacctgccg cgatttcagc ccctcgggca acaggtggcg
     9061 gataaaaagc cgtgtgattt tcaatgcctg ttgcaggctt tcggcggtgc ggaaactgcc
     9121 ttcgcgcaaa tcgatcaggc tttgcccttc gacaattgcg ccggcctcgt gcgaaagcgc
     9181 gtccgtgtcc cggcatacgg gcatgaccgc ctcttcgggc atcagccggt aggttttatc
     9241 cgccaaaata tcgccgcccg tgccgtcggc gtgcaaatcg ggggcaacgc ccaaggcatt
     9301 gagcagcttc cactcgaagc ggcgcaaatc ggcaatgtgg ttggcttcac gacacaccgc
     9361 ctccatcact tttgccaacg cgtcgtacag ttcgggcatc gggtcttcgc gcgcggtcag
     9421 tttcaacacc agttcgttca catacagacc gctgaacaac gccctgccct gcggctgccg
     9481 ccatccgccg acccattcgg cacggtgcag ggttttgagt tcctgactgc cgtaccacga
     9541 cgcactgacg ggcacgaagg aaaccagcac gccgcgcaat tcgctctgcc gcttgcgcgc
     9601 gcttcttgcc aaaagtgcca cacgcccgta acggcggctg aacgcttcga cccgcaggct
     9661 gctttcgcgc catggcgagg aagccaacag gaagacaggt tcgtggttga ctcggtgttc
     9721 ggacatcatg cctgaaatgc cgtctgaacg ctgctgccgc tacaaaacgg cggtcgggta
     9781 cgaaccgatg actttgacga acgaagcgcg ttcgcccaag cgttccaatg ccgtctgaat
     9841 ctgcgcgtcc cggcggtgtc cttcgatgtc gatgaagaac aggtattccc acaaaacgga
     9901 tttactcgga cggctctcaa acttggtcat ggaaataccc gactcagtca gcggttgcag
     9961 cagcgaggca accgcgcctg cccggttggg cgcggaaacg gccagcgaag tcttgtcgct
    10021 gccgcttgca ccggtttcgt gatgtcccat caccaagaag cgcgtggtgt tgttcggttc
    10081 gtcttcgatg cactcggcaa ccatatcgag tccgtagatt tccgccgccg tgcgtccggc
    10141 gatggcggca accgtaccgt cgtccgattc ggcaaccagc cttgcggctt cggcattgct
    10201 ggacacggca atccgttcgg cgttgggcag gtgtctgccc aaccagtcgt tgcactgcgc
    10261 caacgcctgc gcgtgggaaa agactttggc aatgccttcg gtgctgccgt tgtttttacg
    10321 caaaaggttg tggtggatgc gcaaaacgac ttcgccgcac gcctgcaacg cggtaacggc
    10381 aagcaaatcc aacgtgcgcc cgaccgagcc ttcggtcgag ttttccacgg gcgcgaccag
    10441 ataatccgcc tgacgggttt caacctgctt gaagcagttg tctatggtcg gacacgccat
    10501 ggtgtgcgcg gcgtgtccga aatgcttgat cgccgcctgc tgggtaaacg tgccctgcgg
    10561 ccccagatag gcgatggtca gcgggcgttc gacggcgagg cactcgctca tcacttcccg
    10621 aaacaggcgt gctaccgatt cgtcgggcag cgggcctttg ttcaaatcct gaatgcggcg
    10681 caacacggcg acttcgcgtt cgggacggta cactgcgccc gtgcctttca gctcgccgat
    10741 ggcgtgggcg tgttgcgcac gttcgttgag caggcgcagg atttcggcat cgatggtgtc
    10801 gatggcgttg cggtggggaa ggaggagttc gtcgatagtt tgggacataa tttcgcctga
    10861 acggtggttt gccgtgcatt ctaacatcaa atgccgtctg aaacggtttc agacggcatt
    10921 tgatgttaaa ggtattcgct ctgttcgttt tctttccacg cacgatgtga gcagagccac
    10981 agaagcgcaa tgccgcaaga ggtggacgcg gtcatcgttg ccgccatcac ggttgccgaa
    11041 ccgtcgtgca agaaggtcgc cgccataccc acccccgcgc cgattaaaga ttggaataca
    11101 cccaatacgg cgtttgcgct gccgccctct tctttgaaat aagacataaa gcatgcctgc
    11161 gtgttcgcac cgaccaagcc ctgcgtaccg acggaaaaca tcacgcacgc gaccagcagc
    11221 caaaacgggg gcaacccgaa aaacagcacg gcggcgagtt gggacaggtt ggcggcaaac
    11281 tggacgacaa tcccccacag caggatgctt tgcggatgca cgccggtttt gagccgccac
    11341 gcggtaacgc ggttgaaaaa catcatcgtg atgatgttga gtgcaaacgc ccaagcgtat
    11401 tgatgaggcg taacacggta gagctgctgg tacacgaagg aagattcggt cagaaaggcg
    11461 aacatcgaac cgaagctgaa tgcctgaaaa aacagataac ccatcgcggc acgggttttc
    11521 aatacgcgtt tgaaccgccc agccaccagc ccgaacacat cccgtccgat tttgccgccg
    11581 acggcaggct tgggcaggaa atactgtacc aaaccgagca gcaccagcga atacgccgcc
    11641 agaaaaacaa aaatcgcctg ccagccaccc aagccctgca acaatgcgcc gaccatgggt
    11701 gcgaccagcg gcacaaccat caaaatgatg ccgataaggg caaacatctg ggcggctttg
    11761 cgtccggaat aataatcgcg caccattgcg ccgacgatga ccacagtcat gcccgcaccg
    11821 aatgcctgca cgacgcgcag gttgaggagc tgttcggcac tcgaagcaaa tacgatggcg
    11881 gcaacggcaa ggcagtagac ggccagtccg gtcagcgcga cgggtttgcg ccctttgatg
    11941 tcggacaccg aaccgccgac cacctgtccg aacgccgtgc cgaacataaa caaactcagg
    12001 ctctgttcga tgcggtggac atccgcgttc agcgactgcg ccatttcggg aatcgcgggc
    12061 aggtaggcat cgatggaaaa cggcatcagc gtaaccagca tcgccatcaa aaccgccatc
    12121 agtttttcgc tcatttcagg ataatgggca gaaggcataa attctcgtcc gattcgcaaa
    12181 caaaccgccc ggcggcggaa aacacaatac gcggaaacgg aaaattttaa cacaccggca
    12241 caaacaggcg gcaacaaaag ccccggcaaa accggacgaa ccggaacgat atagtggatt
    12301 aacaaaaacc agtacagcgt tgccttgcct tagctcaaag agaacgattc tctaaggtgc
    12361 ttaagcacca agtgaatcgg ttccgtacta tctgtactgt ctgcggctcg ccgccttgtc
    12421 ctgatttttg ttaatccact ataaaatccc gtcattcccg cgcaggcggg aatctggaca
    12481 tccaacgctg cagcaatttg tcggaaataa ccgaaactca aaaaaccgga tgcccgcctg
    12541 cgcgggaatg acgatgcaaa gatggtcgtt atttcggata aatatccgtc ttttcgttcc
    12601 ggatacccgc tttcgcagga atggagatgg aaagatttca gcctattcgg caatcatcaa
    12661 ataccgcttc ccaactttat ttttgatgcg acagccggcc ggcaaccaag gtggcggcga
    12721 tgacgacaaa cacgcccaag gcggacacgg gcgacaggtg ttcgcccaaa atcaaaaccg
    12781 ccagcagcac gccgacgacg ggttcgagcg aaatcaacag tcccgaaacg ttggcaggaa
    12841 cacggctcat ccccttgttc cacagccaat aggcgtacca gccgcacccc aagcccaaat
    12901 acagcagcga caataccatc ccgacgttcc agtccacggt ataactttgc gccaaagcaa
    12961 gcgaaaacgg caggcacatc aacgatgcgg cggcaatgga aacagatgtg aatgccggtg
    13021 cgccgatgcg tgcaatcagc ctttgcgtcg gacgcatagc ggcacaaaag cccgcgcccg
    13081 ccaacaacac cagcaggcag ccgaaccagc cgacttcgcc gccctcttcc gcaccgcccg
    13141 ccatcagcag cgcgacaccg gcaaatgccg ccgcgccgca tatccagtgg taggcacgcg
    13201 ctttgtcgtt gaagaaaaag tgtccgacaa acaccatcag cagtggctcg agtccgacaa
    13261 tgaccgatgc gctggcggcg gaagtgtatt tcaacccgac aaactgaagc agcagggtca
    13321 gcacatagtt gacgaacgac acaatcagca acggcttcca ttcctcacgc ggaatcttgc
    13381 cgacatgacg gcggcaggcg ggcagtgcag gcagcgcagc aatcagcagg cgcacgccga
    13441 ccatcaatgc gggatcgatg ccgccataga catatttggc ggcaataaac gagctgctcc
    13501 agataatcag ggcaaggatt tggtaaaaca tagtgagtga taaagtcaga tggtcataca
    13561 aaagtatagc ggat
//
LOCUS       DBBZXU010000050        13055 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.050, whole genome shotgun sequence.
ACCESSION   DBBZXU010000050 DBBZXU010000000
VERSION     DBBZXU010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 13055)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13055)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13055
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.050"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..524
                     /locus_tag="ACJJDE_001237"
     CDS             <1..524
                     /locus_tag="ACJJDE_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_164729270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FimV/HubP family polar landmark protein"
                     /protein_id="HGG7541163.1"
                     /translation="EVPAVEENAAETVADDLSALLQPAEAPAVEENVTETVAETPDFN
                     ATADDLSALLQPAEVPAVEENAAEITLETPDSNTSEADALPDFLKDGEEETVDWSIYL
                     SEENIPNNADTSFPSESVGSDAPSEAKYDLAEMYLEIGDRDAAAETVQKLLEEAEGDV
                     LKRAQALAQELGI"
     gene            complement(697..1113)
                     /gene="gloA"
                     /locus_tag="ACJJDE_001238"
     CDS             complement(697..1113)
                     /gene="gloA"
                     /locus_tag="ACJJDE_001238"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004462 - lactoylglutathione lyase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0051596 - methylglyoxal catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HGG7541164.1"
                     /translation="MRLLHTMLRVGNLEKSLDFYQNVLGMKLLRRKDYPEGRFTLAFV
                     GYGDETDSTVLELTHNWDTERYDLGNAYGHIAVEVDDAYEACERVKRQGGNVVREAGP
                     MKHGTTVIAFVEDPDGYKIEFIQKKSGDDSVAYQTA"
     gene            complement(1138..2307)
                     /gene="lapB"
                     /locus_tag="ACJJDE_001239"
     CDS             complement(1138..2307)
                     /gene="lapB"
                     /locus_tag="ACJJDE_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0008653 - lipopolysaccharide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HGG7541165.1"
                     /translation="MDNELWIILLPIILLPVFFAMGWFAARVDMKTVLKQAKSIPSGF
                     YKSLDALVDRNSGRAARELAEVIDQQPQSYDLNLTLGKLYRQRGENDKAINMHQTLLD
                     SPDTTGAKRARVLFELAQNYQSAGLVDRAEQIFLGLQDGEMAREARQHLLNIYQQDRD
                     WEKAVETARLLSHDEQTYQFEIAQFYCELAQAALFKSNFDAARFNVGKALEANKKCTR
                     ANMILGDIEHRQGNFPAAVEAYAAIEQQNHAYLSMVGEKLYEAYAAQGKPEEGLNRLT
                     GYMQTFPELDLINVVYEKSLLLKGEKEAAQTAVELVRRKPDLNGVYRLLGLKLSDMNP
                     AWKADADMMRSVIGRQLQRSVMYRCRNCHFKSQVFFWHCPACNKWQTFTPNKIEV"
     gene            complement(2318..2632)
                     /locus_tag="ACJJDE_001240"
     CDS             complement(2318..2632)
                     /locus_tag="ACJJDE_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly LapA
                     domain-containing protein"
                     /protein_id="HGG7541166.1"
                     /translation="MKLIYTVIKIIILLLFLLLAVINTDAVTFSYLPGQKFDLPLIVV
                     LFGAFVVGIVFGMFALFGRLLSLRGENGRLRAEVKKNARLTGKELTAPPAQNAPESAK
                     QP"
     gene            2942..3940
                     /gene="ilvE"
                     /locus_tag="ACJJDE_001241"
     CDS             2942..3940
                     /gene="ilvE"
                     /locus_tag="ACJJDE_001241"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HGG7541167.1"
                     /translation="MSRPVPAVFGSVFHSQMPVLAYREGKWQPTEWQSSQDLSLAPGA
                     HALHYSSECFEGLKAFRQADGKIVLFRPTANIARMRQSADILHLPRPETQAYLDALIE
                     LVKRAADEIPDAPAALYLRPTLIGTDPVIGKAGSPSETALLYILASPVGDYFKVGSPV
                     KILVETEHIRCAPHMGRVKCGGNYASAMHWVLKAKAEYGANQVLFCPNGDVQETGASN
                     FILINGDEIITKPLTDEFLHGVTRDSVLTVAKDLGYTVSERNFTVDELKAAVENGAEA
                     ILTGTAAVISPVTSFVIGGKEIEVKSQERGYAIRKAITDIQYGLAEDKYGWLVEVC"
     gene            complement(4124..4909)
                     /gene="fabI"
                     /locus_tag="ACJJDE_001242"
     CDS             complement(4124..4909)
                     /gene="fabI"
                     /locus_tag="ACJJDE_001242"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HGG7541168.1"
                     /translation="MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKL
                     EERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSG
                     DFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVM
                     GMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLR
                     RNVTIEEVGNAAAFLLSDLSSGITGEITYVDGGYSINALSTEG"
     gene            complement(5064..5885)
                     /gene="dapD"
                     /locus_tag="ACJJDE_001243"
     CDS             complement(5064..5885)
                     /gene="dapD"
                     /locus_tag="ACJJDE_001243"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008666 -
                     2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HGG7541169.1"
                     /translation="MSLQNIIETAFENRADITPSTVAPEVKEAVLETIRQLDSGKLRV
                     AECLGVGEWKVNEWAKKAVLLSFRIQDNEVLNDGVNKYFDKVPTKFADWSEDEFKNAG
                     FRAVPGAVARRGSFVAKNVVLMPSYVNIGAYVDEGAMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQAAPTIIEDNCFIGARSEIVEGVIVEEGSVISMGVFIGQSTKIFDRT
                     TGEIYQGRVPAGSVVVSGSMPSKDGSHSLYCAVIVKRVDAQTRAKTSVNELLRGI"
     gene            complement(5895..6125)
                     /locus_tag="ACJJDE_001244"
     CDS             complement(5895..6125)
                     /locus_tag="ACJJDE_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541170.1"
                     /translation="MPSERRRRGIKVPPPFCIDSGAEKAIPAARPIPKRQCSATARVL
                     LTNMRLRGTIAHSFQMNILLENTGKRPTKHLT"
     gene            complement(6095..7738)
                     /gene="pgi"
                     /locus_tag="ACJJDE_001245"
     CDS             complement(6095..7738)
                     /gene="pgi"
                     /locus_tag="ACJJDE_001245"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7541171.1"
                     /translation="MNAFTRAWYALERHYQDTRHVLLRDRFACEPDRFERMHERLDGM
                     LFDYSKNRLGEDTLQLLCRLAETADLEGKMRALRTGAKVNGSEGRAALHTALRLPDGA
                     DAVYVDGRDVLPEIRRELNRALEFAHSLDDGSYQGITGKRITDFVHIGIGGSDLGPAM
                     CVQALEPFRRHIAVHFAANADPACLDAVLCRLNPETTVFCVASKSFKTPETLLNAQAV
                     KAWYRGAGFSESETACHFCAVSADTAAAAAFGIAAERVFAMYDWVGGRYSVWSSVGLP
                     VMVAVGGARFRELLAGAHAMDSHFFHTPPRRNIPVLMALIAVWYNNFQHADGQTAVPY
                     SHNLRLLPVWLNQLDMESLGKSRASDGSPAVCKTGGIVFGGEGVNCQHAYFQLLHQGT
                     RLIPCDFIVPMTAQGVEDGRSRFTVANAFAQAEALMKGKTLDEARAELADLPEAERER
                     LAPHKEFPGNRPSNSILLDRLTPYNLGMLMAAYEHKTFVQGVIWDINPFDQWGVEYGK
                     QLAKTIIGELEGGTSVHDASTEGLMAFYRECRLKGVGAA"
     gene            8248..9480
                     /gene="pilG"
                     /locus_tag="ACJJDE_001246"
     CDS             8248..9480
                     /gene="pilG"
                     /locus_tag="ACJJDE_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 4 pilus assembly protein PilG"
                     /protein_id="HGG7541172.1"
                     /translation="MAKNGGFSLFAKKEKRFIFEGRHSASDKLVNGEVSAFTEEEARK
                     KLAKRGIRPLQITRVKTSSKRKITQEDITVFTRQLSTMIKAGLPLMQAFEIVARGHGN
                     PSMTEMLMEIRGEVEQGSSLSRAFSNHPKYFDRFYCNLVAAGETGGVLESLLDKLAIY
                     KEKTQAIRKKVKTALTYPVSVIAVAIGLVFVMMIFVLPAFKEVYANMGAELPALTQTV
                     MDMSDFFVSYGWMVLIALGFAIYGFLKLKARSIKIQRRMDAILLRMPIFGDIVRKGTI
                     ARWGRTTATLIAAGVPLVDVLDSTAGAAGNLIYEEATREIRTRVIQGLSMTSGMRATE
                     LFPNMMLQMSSIGEESGSLDDMLNKAAEFYEDEVDNAVGRLSAMMEPIIIVILGLVIG
                     TLLVAMYLPLFNLGNVVA"
     gene            9554..10414
                     /locus_tag="ACJJDE_001247"
     CDS             9554..10414
                     /locus_tag="ACJJDE_001247"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A24 family peptidase"
                     /protein_id="HGG7541173.1"
                     /translation="MSDLSVLSPFAVPLAAVFGLLVGSFLNVVIYRVPVMMERGWTVF
                     AKKHLNLPLTEKESRTFNLMKPDSCCPKCRVPIRAWQNIPIVSYLLLRGKCASCQTKI
                     SIRYPLIELLTGVLFGLVAWQYGWSWITLGGLILTAFLISLTFIDADTQYLPDSMTLP
                     LIWLGLIFNLDGGFVPLQSAVLGAVAGYGSIWLLCAVYKLIKGEIGMGNGDFKLIAAL
                     GAWLGISALPVLIFVSSLIGLVAAIVMRVAKGQHFAFGPALTVSGWIIFTANDSVWRA
                     VNWWLTHPVL"
     gene            10416..11048
                     /gene="coaE"
                     /locus_tag="ACJJDE_001248"
     CDS             10416..11048
                     /gene="coaE"
                     /locus_tag="ACJJDE_001248"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258461.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HGG7541174.1"
                     /translation="MTVWVGLTGGIGSGKSAAAQCFADLGVPRIDADAAAHSLTASDG
                     IALPEIRRLFGDTVFDTQGLLRRDILRKEVFASPSRKALLESVMLPLIFSEIKKQQET
                     FTDAVYGIVEIPLLTEKRQFVSLIRRVLTISAPLEKRIGRVMARSGLTRGEVADIISH
                     QASESERLLLADDVLLNDGSLKSLCEKTMRLHAFYSGIFASKPTQGKHND"
     gene            11041..11250
                     /locus_tag="ACJJDE_001249"
     CDS             11041..11250
                     /locus_tag="ACJJDE_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HGG7541175.1"
                     /translation="MTESRQTRLQVKCPTCQTAVVWKPENAFRPFCSQRCKLIDLGGW
                     ADGKYTVSSQTESLPEISEPDMAYR"
     gene            complement(11335..13011)
                     /gene="pilB"
                     /locus_tag="ACJJDE_001250"
     CDS             complement(11335..13011)
                     /gene="pilB"
                     /locus_tag="ACJJDE_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0009297 - pilus assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type IV-A pilus assembly ATPase PilB"
                     /protein_id="HGG7541176.1"
                     /translation="MSVGLLRILVQNQVVTVEQAEHYYNESQAGKEVLPMLFSDGVIS
                     PKSLAALIARVFSYSILDLRHYPRHRVLMGVLTEEQMVEFHCVPVFRRGDKVFFAVSD
                     PTQMPQIQKTVSAAGIEVELVIVEDDQLAGLLDWVGSRSTSLLQELGEGQEEEESHTL
                     YIDNEEAEDGPVPRFIHKTLSDALRSGASDIHFEFYEHNARIRFRVDGQLREVVQPPI
                     AVRGQLASRIKVMSRLDISEKRIPQDGRMQLTFQKGGKPVDFRVSTLPTLFGEKVVMR
                     ILNSDAASLNIDQLGFEPFQKKLLLEAIHRPYGMVLVTGPTGSGKTVSLYTCLNILNT
                     ESVNIATAEDPAEINLPGINQVNVNDKQGLTFAAALKSFLRQDPDIIMVGEIRDLETA
                     DIAIKAAQTGHMVFSTLHTNNAPATLSRMLNMGVAPFNIASSVSLIMAQRLLRRLCSS
                     CKQEVERPSASALKEVGFTDEDLAKDWKLYRAVGCDRCRGQGYKGRAGVYEVMPISEE
                     MQRVIMNNGTEVDILDVAYKEGMVDLRRAGILKVMQGITSLEEVTANTND"
BASE COUNT         3015 a         3627 c         3407 g         3006 t
ORIGIN      
        1 ctgaagtacc tgccgttgag gaaaatgcag cggaaaccgt tgccgatgat ttgtccgcac
       61 tgttgcaacc tgctgaagca ccggccgttg aggaaaatgt aacggaaacc gttgccgaaa
      121 cacccgattt caacgccacc gcagacgatt tgtccgcatt acttcaacct gctgaagtac
      181 ctgccgttga ggaaaatgca gcggaaatca ctttggaaac gcctgattcc aacacctctg
      241 aggcagacgc tttgcccgac ttcctgaaag acggcgagga ggaaacggta gattggagca
      301 tctacctctc ggaagaaaat atcccaaata atgcagatac cagtttccct tcggaatctg
      361 taggttctga cgcgccttcc gaagcgaaat acgaccttgc cgaaatgtat ctcgaaatcg
      421 gcgaccgcga tgccgctgcc gagacagtgc agaaattgct ggaagaagcg gaaggcgacg
      481 tactcaaacg tgcccaagca ttggcgcagg aattgggtat ttgattccca actgcccttt
      541 cgcagatcaa ggatgccgtt tcagacggca tctttttttg ccttatcggt gtaacggata
      601 aagtttgaac cggcacaggc tcaaacagca ggtcgacggc aacaaaatgc cgtctgaaac
      661 ccctaaaggc ttcagacggc attggcggcg gcggtatcag gcagtttgat aggcaaccga
      721 atcgtcaccg cttttctttt gaatgaattc gattttgtat ccgtcggggt cttcgacgaa
      781 ggctatcacg gttgtgccgt gtttcatcgg gccggcttcg cggacgacgt ttccgccctg
      841 ccgcttcaca cgttcgcagg cttcgtaggc atcatccact tcaaccgcga tgtgtccgta
      901 ggcgttgccc aagtcgtatc gttccgtatc ccagttgtgc gtcagttcca aaaccgtgct
      961 gtcggtttca tcgccgtaac cgacgaaggc aagggtaaat ctgccttcgg gataatcttt
     1021 tcggcggagc agtttcatac ccaaaacgtt ttggtagaaa tcgagggatt tttcgagatt
     1081 gcccacgcgg agcatagtat ggagtaagcg cattttttgt gttcctttcg gtggtggtta
     1141 aacttcgatt ttattcgggg taaacgtctg ccatttgttg caggcggggc agtgccagaa
     1201 aaagacttgg gatttgaagt ggcagttgcg gcaacggtac atcacgctgc gctgtagctg
     1261 ccgtccgata accgaacgca tcatgtcggc atcggctttc caagccggat tcatatcgct
     1321 gagtttcaaa ccgagcaggc ggtacacgcc gttaaggtcg ggcttgcggc ggacaagctc
     1381 gacggcggtt tgcgcggctt ctttctcgcc cttaagcagc agggatttct cgtacacgac
     1441 attgatcagg tcaagttcgg gaaacgtctg catatatcct gtcagacggt tcaagccttc
     1501 ttcaggtttt ccctgcgcgg cataggcttc gtaaagcttc tcgccgacca tgctcaagta
     1561 tgcatggttt tgctgctcga tggcggcata ggcttcgacg gcggcaggga aattgccttg
     1621 tcggtgttcg atgtcgccca aaatcatgtt ggcgcgggtg cattttttgt tggcttcgag
     1681 tgccttgccg acattgaaac gcgcggcatc gaaattggac ttgaacagcg cggcttgggc
     1741 aagttcgcaa tagaactgtg caatctcaaa ctgataggtc tgctcgtcat ggctgagcag
     1801 ccgggcggtt tcaaccgctt tttcccaatc cctgtcctgt tggtagatat tgagcaggtg
     1861 ctgtctggct tcacgcgcca tttcaccgtc ttgcagcccc aaaaaaatct gttcggcacg
     1921 gtcaaccaac cccgcacttt gatagttttg cgccaattca aataatacgc gcgcacgctt
     1981 ggctccggtt gtatcgggag agtcaagcaa tgtttggtgc atattgatgg ctttgtcgtt
     2041 ttcgccacgc tgacggtaaa gcttgcctag ggtgaggttc aggtcgtatg actgaggctg
     2101 ctgatcgatg acctctgcca attccctggc ggcacgtccg ctgttgcggt caaccaaggc
     2161 atccagactt ttataaaatc ccgacggtat gctttttgcc tgctttaata cagtcttcat
     2221 atccacgcgg gcggcaaacc agcccatcgc gaagaaaacg ggcaaaagga taatcggcag
     2281 caggataatc cacaattcat tgtccatatc ggctttctca aggctgtttg gcagattcgg
     2341 gcgcattttg cgccggtggt gcggtcagct ccttccccgt caaacgcgca tttttcttta
     2401 cttcggcacg caacctgccg ttctcgccac gtaacgacaa caaccgtccg aacaaggcaa
     2461 acattccaaa aacaataccg actacaaatg cgccgaacaa tacgacaatc agcggcaaat
     2521 cgaatttttg ccccggcagg taggaaaagg taacggcatc cgtattaatg acagcaagca
     2581 gcaggaagag cagcaggata atgattttga tgacggtata gataagtttc atgtttgctc
     2641 cgtaaataaa aacgccgccc ggacagcttc gcactctgaa ccaagattgc gctagtttaa
     2701 acgatttgca cggtttcgga taggatgcgg cagcgtgttc ggacgacata cggagtatgc
     2761 gattgccgac aattttacca aatacaccgt tcctttccat ttgaaaaata acggattgga
     2821 caccgcatcg acagaaaaac ccgccgcgca cttgtcaaaa ccctgtttgc aggcgtatct
     2881 ttacaatctt caaattcaaa ccgttcattg aaacatatca gaataagaaa ggcttttcat
     2941 catgagcaga cccgtacccg ccgtattcgg cagcgttttt cacagtcaaa tgcccgtcct
     3001 cgcctaccgc gaaggcaaat ggcagccgac cgaatggcaa tcttcccaag acctctccct
     3061 cgcaccgggt gcgcacgccc tgcactacag cagcgaatgt ttcgagggac tgaaagcctt
     3121 ccgtcaggca gacggcaaaa tcgtactgtt ccgtccgact gccaacatcg cgcgtatgcg
     3181 gcaaagtgcg gacattttgc acctgccgcg ccccgaaacc caagcctatc tcgacgcgct
     3241 aatcgaattg gtcaaacgcg ccgccgatga aattcccgat gcgcctgccg ccctgtacct
     3301 gcgtccgacc ttaatcggta ccgatcccgt tatcggcaag gccggttctc cttccgaaac
     3361 cgccctgctg tatattttgg cttcccccgt cggcgactat ttcaaagtcg gctcgcccgt
     3421 caaaatttta gtggaaaccg aacacatccg ctgcgccccg catatgggcc gcgtcaaatg
     3481 cggcggcaac tacgcttccg ccatgcactg ggtgctgaag gcgaaagccg aatacggcgc
     3541 aaaccaagtc ctcttctgcc cgaacggcga cgtgcaggaa accggcgcgt ccaactttat
     3601 cctgattaac ggcgatgaaa tcattaccaa accgctgacc gacgagtttt tgcacggcgt
     3661 aacccgcgat tccgtactga cggttgccaa agatttgggc tataccgtca gcgaacgtaa
     3721 tttcacggtt gacgaactga aagctgctgt ggaaaacggt gcggaggcga ttctgaccgg
     3781 tacggcagcc gtcatctcgc ccgttacttc cttcgtcatc ggcggcaaag aaatcgaagt
     3841 gaaaagccaa gaacgcggct atgccatccg taaggcgatt accgacatcc agtatggttt
     3901 ggcggaagac aaatacggct ggctggtcga agtgtgctga tgctttaaat aaaaaatgcc
     3961 gtctgaaacc cgtttggcgt ttcagacggc attttcgcgt tcggaccatt tccgctgcac
     4021 ctgcagcaag tcgggcattt ccctagaaat acgcttcaga cggcaaaccg ccgcccgaaa
     4081 ccgatacgcg gcacggacgg cgcacggatt tgaaaacggc ggattatccc tcggtgctca
     4141 aggcattgat gctgtaaccg ccgtcaacgt aagtgatttc gccggtaatg ccggacgaca
     4201 ggtcggacag caggaaggcg gcggcattgc cgacttcttc gatggtaacg ttgcggcgca
     4261 gcggattgtg ggcggcgacg tgtcccaaga gtttgccgaa atcggcgatg ccggaggcgg
     4321 cgagtgtttt gatcggaccg gcggaaatac cgttgcagcg gatgccttct ttgcccaaac
     4381 aggcggcggt aaagcggatg cctgcctcaa ggctggcttt tgccataccc atcacgttgt
     4441 agttcggaat cgcgcgcacc gcgcccaagt agctcagggc gacgatggcg gagtttctgc
     4501 cgcgcatcat cggacgggcg gcttttgcca gcgcaggtag gctgtatgcg gaaatttcgt
     4561 gtgcggtgtt gaacgcttcg cggctgatgc tgtcgaggaa gtcgccgctc aaggcttctt
     4621 tcggcgcaaa accgatggaa tgcaccaaac cgtccaagcc gtcccaatgt ttgcccaaat
     4681 cggcgaacac ttggttgatt tcgtcgtcgc tggcgacatc gcagcggaac acgagttcgg
     4741 aatccaattc cgccgccatt ttgcggacgc gctcttccag tttgtccaca acgtaggtaa
     4801 acgccagttc cgcgccttgt tcgcggcagg ctttggcgat gccgtaagcg atggaacgct
     4861 cggaaatcat gccggtaatc agaatttttt tgccttgcag aaaacccatt ttgtatcctt
     4921 caaatagtgt tcggttcgtt ctaaaccgtt gattatagca aattgtccct gtttctgtgt
     4981 tttcacgttg cagcatgcaa acggcaatgc cgtccgaagc ggatttcaga cggcatcgga
     5041 cgtttcaaat acggtttaag gcatcagatg ccgcgcaaca attcgttcac actggttttc
     5101 gcacgggttt gcgcgtccac gcgtttgacg atgacggcgc agtaaaggct gtggctgccg
     5161 tctttggaag gcatactgcc ggacacgacg accgaacctg ccggtacgcg gccttggtag
     5221 atttcgccgg tggtgcggtc gaagattttg gtggattgac cgatgaacac gcccatcgaa
     5281 atcacgctgc cttcttcgac aatcacgccc tcaacgattt cagaacgcgc accgatgaag
     5341 cagttgtctt caatgatggt gggggcggcc tgcaggggtt cgagtacgcc gccgataccg
     5401 acgccgccac tcaagtgcac gtttttgccg atttgcgcgc aagagccgac agtcgcccaa
     5461 gtatcgacca tcgcgccttc gtcgacgtat gcgccgatgt tgacgtaaga cggcatcagc
     5521 acgacatttt tcgccacaaa gctgccgcgt cgggcaaccg cacccggaac ggcgcggaag
     5581 cctgcgtttt tgaactcgtc ttcagaccag tcggcaaact tggtcggcac tttgtcgaag
     5641 tatttgttca cgccgtcgtt gaggacttcg ttgtcttgga tgcggaagga cagcaacacg
     5701 gcttttttcg cccattcgtt gactttccac tcgcccacgc ccaagcattc ggcaacgcgc
     5761 agtttgcctg aatcgagttg gcggatggtt tccaacacgg cttctttaac ttcgggagca
     5821 acagtggacg gggtgatgtc cgcgcggttt tcaaaggcgg tttcgataat gttttgcaaa
     5881 gacataatgt ttccttatgt gagatgtttc gtgggacgct tgccggtatt ttcaagcagt
     5941 atgttcattt gaaatgaatg cgctattgtg ccacgcaaac gcatattcgt cagcaatacg
     6001 cgggcggttg ccgaacattg gcgtttcgga atcgggcggg cggcaggtat tgccttttcc
     6061 gcacccgaat caatacagaa cggcggcggt acttttatgc cgcgccgacg cctttcagac
     6121 ggcattcacg gtaaaacgcc atcagccctt cggtcgaggc atcgtgtacg gacgtgccgc
     6181 cttccagttc gccgatgatg gttttcgcca actgtttgcc gtactcaacc ccccactgat
     6241 cgaagggatt gatgtcccaa attacaccct gcacaaaggt tttgtgttcg taagccgcca
     6301 tcagcatacc cagattgtag ggcgtgaggc ggtcgagcag gatgctgtta ctggggcggt
     6361 tgccggggaa ctctttgtgc ggcgcgaggc gttcgcgttc cgcttcgggc aaatctgcca
     6421 attcggcgcg tgcttcgtcc aaggttttgc ccttcatcag ggcttccgct tgggcaaagg
     6481 cgttggcaac ggtaaaacgg ctgcgtccgt cctccacgcc ctgcgccgtc atcgggacga
     6541 taaagtcgca gggaatcagg cgcgtgcctt gatgaagcag ttggaaatag gcgtgctggc
     6601 agttgacccc ttcaccgccg aacacgatgc cgcccgtttt gcacacggcg ggactgccgt
     6661 ctgaagcgcg gcttttgccc aaactctcca tatcgagctg gttcagccac accggcagca
     6721 ggcgcaggtt gtggctgtac ggaacggcgg tctgcccgtc cgcgtgttgg aaattgttat
     6781 accacacggc aatcagtgcc atcagaacgg gaatgttgcg gcgcggcggc gtgtggaaaa
     6841 aatggctgtc catcgcgtgc gcccccgcca acaactcgcg gaaacgcgcc ccgccgaccg
     6901 caaccatcac gggcaaaccg acggacgacc agacggaata gcgtccgccc acccagtcgt
     6961 acatcgcaaa cacgcgttcc gccgcgatac cgaaagccgc agctgccgca gtgtcggcag
     7021 acaccgcgca aaaatggcac gccgtttcgg attccgagaa ccccgcaccg cgataccacg
     7081 ccttgactgc ctgtgcattg agcagggttt ccggtgtttt gaaggacttg ctggcaacgc
     7141 aaaacactgt cgtttcgggg ttcagacggc ataaaaccgc atccaggcag gcaggatcgg
     7201 cgttggcggc aaaatggacg gcgatatgcc gtctgaacgg ctcgagtgcc tgaacgcaca
     7261 ttgccggccc gaggtcggat ccgcctatgc cgatgtggac aaaatccgta atccgtttcc
     7321 cagttatccc ctgatacgaa ccgtcgtcca aactgtgtgc aaactccaac gcacgattta
     7381 actcgcggcg gatttcgggc aacacgtccc tgccgtccac ataaacggca tccgcaccgt
     7441 cgggcaggcg caaagccgta tgcagcgcgg cacgcccctc gctgccgttg actttcgcac
     7501 ccgtccgcaa agcacgcatt ttcccttcca aatccgccgt ctccgcaaga cggcagagca
     7561 gttgcagcgt atcttcgccc aaacggtttt tgctgtaatc gaacaacatc ccgtccaaac
     7621 gctcatgcat acgctcaaaa cggtcgggtt cgcaggcaaa gcggtcgcgc aaaaggacat
     7681 gacgcgtatc ctgataatgg cgttcgagcg cataccatgc acgggtaaaa gcattcatct
     7741 gttttccttg atttttcaga accggattaa aatgtagcag aatgtagttt aacaaacggc
     7801 agcggctttg gcgaatctcc ggaacaccgc ccgccgcgtc caatagcacc ttatttccat
     7861 atggcgaaaa tatagtgaat taacaaaaat caggacaagg cggcgagccg cagacagtac
     7921 aaatagtatg gaaccgattc acttggtgct tcagcacctt agagaatcgt tctctcttga
     7981 gctaaggcga gccaacgctg taccggtttt tgttaattca ctataccctc cggccgacat
     8041 ttgacccgca acaatatcct gcaagattta ttgtgtacgc ataaatgccg gacagccgcc
     8101 taaataaggt ataatcgcat ccgattctgt cccgtttgcc gcccgcaggc gggatgtcgg
     8161 cggttttcat cttaccggga acacgccggt actgtttttt aacgatgttt cttacatttt
     8221 attccaatta ctttacgggg ctagaatatg gctaaaaacg gaggattttc tttgttcgca
     8281 aagaaagaaa aacgctttat ctttgaaggc aggcattccg cctccgacaa actggtcaac
     8341 ggcgaagtat ccgcgtttac cgaagaagag gcgcgcaaaa aactggcaaa acgcggcatc
     8401 cgcccgttgc agattacccg tgtgaaaaca agctccaagc gcaaaatcac acaagaagac
     8461 atcaccgttt tcacccgcca gctgtccacg atgattaaag cgggcctgcc gctgatgcag
     8521 gcatttgaaa tcgtggcgcg cggacacggc aacccgtcta tgacggaaat gctgatggaa
     8581 atccgaggcg aagtggaaca gggcagctcg ttgagccgcg cattctcaaa ccacccgaaa
     8641 tatttcgacc gcttctactg caacctggtt gcggcaggcg aaacgggcgg cgtattggaa
     8701 agcctgctgg acaaattggc aatttacaaa gaaaaaaccc aggccatccg caaaaaggta
     8761 aaaaccgcac tgacctatcc ggtatccgtc atcgccgtcg ccatcggttt ggtattcgtg
     8821 atgatgattt tcgtactgcc cgcctttaaa gaagtttacg ccaatatggg cgcggagctt
     8881 cccgcactga cccaaacagt gatggatatg tccgactttt tcgtctcata cggctggatg
     8941 gtgctgatcg cactgggctt tgccatatac ggcttcctta aattgaaggc gcgttcgatt
     9001 aaaatccaac ggcgtatgga tgccatactg ctgcgtatgc cgattttcgg agacattgtc
     9061 cgcaaaggga cgattgcccg ctggggcagg acgacagcga cgctgattgc ggcaggcgtg
     9121 cctttggtcg atgtattgga ctccactgcc ggcgcggcgg gcaatttaat ctatgaagaa
     9181 gccacccggg aaatccgtac gcgcgtcatc caaggtttgt ctatgacttc ggggatgcgt
     9241 gcgacggaac tgttccccaa tatgatgttg cagatgtctt ccatcggcga ggaatcgggt
     9301 tctttggacg atatgctcaa caaagccgcc gaattttacg aagacgaggt ggacaatgcg
     9361 gtcggcaggc tgtccgctat gatggagccg atcattatcg tgattttagg cttggtcatc
     9421 ggcacgcttc tggtcgccat gtatctgccg ctgtttaatt tgggcaacgt ggtcgcctga
     9481 tttgccgcac agatccggcg cggattcgct ctgcgccggt ttgtttttgt tttgaataca
     9541 ttgagaacaa aatatgtctg atttgtctgt attgtcgccg tttgccgtgc ctttggcagc
     9601 ggtgttcggg ctgctggtcg gcagtttctt aaacgtcgtc atttaccgcg tgccggtcat
     9661 gatggaacgc ggctggacgg tatttgccaa aaaacattta aacctgccgc tgaccgaaaa
     9721 ggaaagccgt accttcaacc tgatgaaacc ggattcctgc tgtcccaaat gccgcgtgcc
     9781 gatacgcgcg tggcagaaca tcccgattgt cagctacctg ctcctgcgcg gcaaatgcgc
     9841 ttcctgccaa accaaaatca gcatacgtta tcccttaatc gagctgctga ccggcgtatt
     9901 attcgggctg gtcgcctggc aatacggctg gtcttggatt acattgggcg gtttgatact
     9961 gaccgcgttt ctgatttccc tgacctttat cgatgcggac acccaatacc tgcccgactc
    10021 gatgacactg cccttgattt ggctggggct gatatttaat ttggacggcg gcttcgtgcc
    10081 tttgcagtct gccgttttag gtgcggttgc cggctatggt tcgatatggc ttttatgcgc
    10141 ggtatataaa ctgattaaag gcgaaatcgg tatgggcaac ggagatttca aactgattgc
    10201 cgcattgggc gcgtggctcg gcatatccgc attgcccgtg ctgatttttg tttcctcgct
    10261 gatcggtttg gtcgcggcaa tcgttatgcg cgtcgccaag gggcagcatt ttgccttcgg
    10321 ccccgcactg acagtttcgg gctggataat ttttacggca aacgattccg tatggcgggc
    10381 ggtcaactgg tggctgaccc atccggtgct gtaagatgac ggtatgggtc gggctgaccg
    10441 gcggaatcgg cagcggcaaa tcggcagccg cgcaatgttt tgccgatttg ggcgtgccgc
    10501 gcatcgatgc ggacgcggcg gcgcactcgc tgacggcttc agacggcatc gccctgccgg
    10561 aaatcaggcg gctgttcggc gacaccgttt ttgacacaca gggtttgttg cggcgcgaca
    10621 tattgcgtaa agaagtcttt gcctccccat cgcgaaaagc cttgctcgaa tccgtgatgt
    10681 tgccgctgat tttctcagaa atcaaaaaac agcaagaaac ctttaccgat gcggtttacg
    10741 gcattgtcga aattccgctg ctgacggaaa agcgtcaatt tgtcagcctg atacggcgtg
    10801 tcctgaccat aagcgcacct ttggaaaaac gtatcggcag ggtgatggcc cgcagcgggc
    10861 tgacgcgcgg cgaggtggcg gacatcatca gccatcaggc atccgaatcc gaacgcctgc
    10921 tgcttgcaga cgatgtgctg ctcaatgacg gcagcctcaa aagcctgtgt gagaaaacaa
    10981 tgcgcctgca cgcgttttat tcagggattt tcgcctcaaa accaacacaa ggaaaacaca
    11041 atgactgaat cgcggcaaac acgccttcaa gtcaaatgtc cgacctgtca aacggcagta
    11101 gtatggaaac cggaaaacgc attccgcccc ttctgttcgc aacgctgcaa actgatcgac
    11161 ttgggcggat gggcagacgg gaaatatacg gtttccagcc aaacggaaag tttgccggaa
    11221 atatccgaac ccgacatggc ataccgctga ccgccccgcc ttcccggcaa acaccctgaa
    11281 agtcaaatgc cgtctgaaac aaacacgctt cagacggcat tttcattctc aaacctaatc
    11341 gttggtattt gccgttacct cttccaatga agtaatgccc tgcataactt tcaaaatacc
    11401 ggcccggcgc aaatccacca taccctcctt ataggcaacg tccaaaatat ccacttccgt
    11461 accgttgttc ataatcacac gctgcatttc ttcgctgatg ggcataacct catacacgcc
    11521 cgcacgcccc ttataaccct gcccccggca acggtcgcaa ccgacggcgc ggtaaagttt
    11581 ccaatctttt gcaaggtcct catcggtgaa gccgacttcc ttcaaagcag aggcagacgg
    11641 gcgttccact tcctgtttgc agctcgaaca cagcctgcgt aaaagacgct gcgccataat
    11701 caggctgacc gaactggcaa tattaaacgg cgcgacaccc atattcagca tacgcgacaa
    11761 cgtcgccggc gcattattgg tgtgcagggt ggaaaacacc atatgccctg tttgtgccgc
    11821 cttaatcgca atatcggcag tttccaaatc acgaatctca ccgaccataa tgatgtccgg
    11881 gtcctgacgc aggaaagact tcaaagcagc ggcaaaagtc aggccctgct tatcattgac
    11941 gttaacctga ttgatgcccg gcaggttaat ctcggcaggg tcttccgccg ttgcaatatt
    12001 taccgactcc gtattcaaaa tattcaaaca ggtatagagc gacaccgtct tacccgaacc
    12061 cgtcggaccg gttaccagca ccatcccgta gggacggtga atcgcttcca acaacaattt
    12121 tttctgaaac ggctcaaaac cgagctggtc gatgttcaaa gacgcggcat cggaattcaa
    12181 aatccgcatc acgacctttt cgccaaacag cgtcggcaat gtgctgacac ggaaatcgac
    12241 aggcttgccg cccttttgaa aggtcagctg catcctgccg tcctgcggta tccgtttttc
    12301 ggaaatgtcc aaacgcgaca ttaccttaat ccgggaagca agctgccccc ttaccgcaat
    12361 gggcggctga accacctcgc ggagctgccc gtccacacgg aaacggatac gggcattgtg
    12421 ttcgtaaaac tcgaaatgga tgtccgatgc cccgctgcgc aaggcatccg acaaagtctt
    12481 atggataaac ctcggaacag ggccatcttc tgcctcctcg ttgtcgatat acagggtgtg
    12541 gctttcctct tcctcctgcc cctccccaag ctcctgaagc agcgatgtcg aacgcgaacc
    12601 cacccaatcg agcaaacccg ccaactggtc atcctcgaca atgaccaact caacctcaat
    12661 ccctgcggca gaaacggttt tctgaatttg cggcatctgt gtcggatcgg aaaccgcaaa
    12721 aaatactttg tcgccccgac ggaaaaccgg cacacagtgg aactccacca tctgctcctc
    12781 cgtcaacacc cccatcagca ccctgtggcg cggataatga cgcaaatcaa gaatcgaata
    12841 actgaacacc ctcgcaatca atgccgcaag cgacttgggc gaaatgacac cgtctgaaaa
    12901 cagcatcggc aacacttcct tacccgcctg cgactcattg tagtaatgct cggcctgctc
    12961 aacagtaacc acctggtttt gaaccagaat cctcagcaaa cctacgctca tacgacctta
    13021 tccccaaatt tattcattgt tatacctgta cagct
//
LOCUS       DBBZXU010000051        12731 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.051, whole genome shotgun sequence.
ACCESSION   DBBZXU010000051 DBBZXU010000000
VERSION     DBBZXU010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12731
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.051"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..226
                     /locus_tag="ACJJDE_001251"
     CDS             <1..226
                     /locus_tag="ACJJDE_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7541177.1"
                     /translation="CRNRPLTETQTKHNRYLSKIRYVVEQSFGTLHRKFRYARAAYFG
                     LIKVSAQSHLKAMCLNLLKAANRLSAPAAA"
     gene            complement(547..1476)
                     /locus_tag="ACJJDE_001252"
     CDS             complement(547..1476)
                     /locus_tag="ACJJDE_001252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HGG7541178.1"
                     /translation="MDSIIELRHLKTLLALEETGSVSLAAKRVFLTQSALSHQIRMLE
                     NHYGAPLFERKSTPLRFTPVGERLLRLAHDLLPQVTDAERDLARIIEGEAGELRIAVE
                     CHTCFDWLMPAMGEFRPMWPQVELDIVSGFQADPVGLLLQHRADLAIVSEAEKQNDIS
                     FQPLFAYEMVGICAPDHPLAAKNVWTAEDFIGETLITYPVPDEMLDLPKKILIPKNIN
                     PPRRHSELTIAIIQLVASRRGIAALPYWTVMPYLEKGYVVHRQITADGLQSKLYAAIR
                     TEDTDKSYLNNFCQIIRERGFADLPGLSELEPV"
     gene            1607..2356
                     /locus_tag="ACJJDE_001253"
     CDS             1607..2356
                     /locus_tag="ACJJDE_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0051540 - metal cluster binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HGG7541179.1"
                     /translation="MVLRRDFLTWCNETLQTALFKDYAPNGLQVEGREYIGKIVTSVT
                     ASRAAIDFAVEQKADLLLVHHGMFWKNELPTVTGWKKERIAALLRHDINMAGYHLPLD
                     AHPTLGNNAQLADRLGFATEKRFGEQNLLNSGSLKQAKTLGALAAHIETVLQRKPVVI
                     GKPEREIRRVAWCSGGAQGFFQTAIDEGVDLYLTGEISEAQYHLANETGTAFISAGHH
                     ATERYGVRALAESAAEVFGLEVCHFDENNPA"
     gene            2479..3060
                     /gene="petA"
                     /locus_tag="ACJJDE_001254"
     CDS             2479..3060
                     /gene="petA"
                     /locus_tag="ACJJDE_001254"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HGG7541180.1"
                     /translation="MDNQEINNGRRRFLTLATCGAGGVAALGVATPFVASFFPSEKAK
                     AAGAAVEVDVSKIEAGQLLTAEWQGKPIWVLNRTDQQLKDLKGLNGELTDPNSDAEQQ
                     PEYAKNETRSIKPNILVAIGICTHLGCSPTFRPDIAPADLGADWKGGFFCPCHGSKFD
                     LAGRVYKGVPAPTNLVVPPYKYLSDTTILVGED"
     gene            3079..4428
                     /locus_tag="ACJJDE_001255"
     CDS             3079..4428
                     /locus_tag="ACJJDE_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bc complex cytochrome b subunit"
                     /protein_id="HGG7541181.1"
                     /translation="MANQTNSKAKALLGWMDARFPLSKMWNEHLAQYYAPKNFNFWYY
                     FGSLALLVLVIQIVSGIFLTMNYKPDGNLNAYHLPAAFTAVEYIMRDVSGGWIIRYMH
                     STGASFFFIVVYLHMFRGLIYGSYKKPRELVWIFGSLIFLALMAEAFMGYLLPWGQMS
                     FWGAQVIINLFSAIPVIGPDLSTWIRGDFNVSDVTLNRFFALHVIAVPLVLLGLVVAH
                     IIALHEVGSNNPDGVEIKKNKDENGIPRDGIPFHPYYTVKDILGVVVFLIVFCAVLFF
                     APEGGGYFLEAPNFDAANALKTPPHIAPVWYFTPFYAILRAIPSFLGTQVWGVIGMGA
                     AVVLIALLPWLDRGEVKSVRYRGPIFKTALVLFIISFIGLGILGAMVATDTRTLVARI
                     LSFVYFAFFLGMPFYTKLDKNKPVPERVTMSTAKQKIMFFVYVGITAVGAYLFATNI"
     gene            4443..5231
                     /locus_tag="ACJJDE_001256"
     CDS             4443..5231
                     /locus_tag="ACJJDE_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002255404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
                     /protein_id="HGG7541182.1"
                     /translation="MKQAMKNWFAALLLAVPMGAAFASGGHAHYEKVDIDLRDQVSLQ
                     RGAQIFTNYCLSCHSASGMRFNRLKDIGLTDEEIKKNLMFTTDNVGDVMHSAMNPKDA
                     AKWFGAAPPDLTLIARSKGADYLYAYMRGFYKDPTRPSGWNNTVFDKVGMPHPLWEQQ
                     GVQAVELDAKGQPVMVKDEHGEMKPKLYWESTGLHSRRLPNGKVIQKEYDAYVRDLVN
                     YLVYMGEPAQLQRKRIGYVVMIFLFAVMLPLAYFLKKEYWKDVH"
     gene            5570..7354
                     /gene="rmuC"
                     /locus_tag="ACJJDE_001257"
     CDS             5570..7354
                     /gene="rmuC"
                     /locus_tag="ACJJDE_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HGG7541183.1"
                     /translation="MELMTVLLPLAALVSGVLFTWLLMKGRFQGEFADLNAQLAEKAA
                     RCDFVEQAHAEIASELAVLDGKYRHLQDENYALGNRFSAAEKQIAHLQEKEAESVRLK
                     QSYIELQEKAQGLAVENERLATQLGQEQKAFADQYALERQIRQRIETDLEESRQTVRD
                     VQNDLSDVGNRFAAAEKQIAHLQEKEAEAERLRQSHIDLQEKAQGLAVENERLTTQIE
                     QERLASEEKLSLLGEARKSLSDQFQNLANTILEEKSRRFTEQNREQLHQVLNPLNERI
                     HGFGELVRQTYDKESRERLTLENELKRLQGLNAQLHSEAKALTNALTGTQNKVQGNWG
                     EMILETVLENSGLQKGREYVVQAAAVRKEEDGGTRRLQPDVLVNLPDNKQIVIDSKVS
                     LTAYVRYTQAADADTAARELAAHVASIRAHMKGLSLKDYTDLEGVNTLDFVFMFIPVE
                     PAYLLALQNDAGLFQECFDKRIMLVGPSTLLATLRTVANIWRNEQQNQNALAIADEGG
                     KLYDKFVGFVQTLESVGKGIDQAQNSFQTAFKQLAEGRGNLVGRAEKLRLLGVKANKQ
                     LARDLTERANETTALSESLEYAAEDEAV"
     gene            complement(7561..8193)
                     /locus_tag="ACJJDE_001258"
     CDS             complement(7561..8193)
                     /locus_tag="ACJJDE_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HGG7541184.1"
                     /translation="MTLRYEILSVTPFRQNCTLIWDDESGEAVLTDVGGDVPFLLQAL
                     ANRKLTLTAIWLTHGHLDHAGGVVEMLKTHKVPVLGPHPDDEFLLQSLPQTTAQYGFP
                     VSPAFAPNHWLEEGETLKVGRYAFQVLHIPGHTPGHVVFYCAEAELLIAGDVLFYETI
                     GRTDFPRGNHADLINNIRNKLFALPETVQVVAGHGRMTSIGHEKRHNPFF"
     gene            8284..9108
                     /locus_tag="ACJJDE_001259"
     CDS             8284..9108
                     /locus_tag="ACJJDE_001259"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase"
                     /protein_id="HGG7541185.1"
                     /translation="MIKKTIGGIIPIFTAVFIPASAGAADLMLAQEYKDQEIAGWAMS
                     EKLDGVRAYWDGKHLISRQGYAFTPPKGFTAQFPPYPLDGELYSGRGQFEQISATVRS
                     VSSDWRGIRLHVFDVPKAQGNLYQRLAVATQWLKTHPNAPITIIPQTKVRDRQHAMDF
                     LKQIEAQGGEGVMLRQPESRYSGGRSSQLLKLKSQYDDECTVTRHYEGKGRNAGRLGA
                     VGCKNRHGEFRIGSGFKDKDRDNPPKIGTLITYRYRGFTRKGTPKFATFVRVRTDR"
     gene            9177..9740
                     /locus_tag="ACJJDE_001260"
     CDS             9177..9740
                     /locus_tag="ACJJDE_001260"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine-guanine phosphoribosyltransferase"
                     /protein_id="HGG7541186.1"
                     /translation="MTDLETKRLETQAMLENADLLFDQGQCRAALQKVADEITRDLGG
                     KYPLLLPVMGGAVVFTGQLLPLLRFPLDFDYVHVSRYGDKLEGGAFNWKRMPDAEQIR
                     GRHVVVLDDILDEGHTMSAIQAKLLEMGAASCRAAVFANKLIDKPKPIRADYVGLDVP
                     NRYVFGYGMDAAGCWRNLGEIYALDGK"
     gene            9822..10259
                     /locus_tag="ACJJDE_001261"
     CDS             9822..10259
                     /locus_tag="ACJJDE_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HGG7541187.1"
                     /translation="MIGLLIITHETIGEAYRKLAHHFFPGGLPENVRILGVQPTEDQD
                     DIINNAIAALQEFPDNDGVLIMTDIFGATPCNAARRLVRENKSAILTGLNAPMMVKAV
                     QYSPAAEDLAAFTECVREAAVKGIFAITSAPEDLVCRRSGDAV"
     gene            10328..10597
                     /locus_tag="ACJJDE_001262"
     CDS             10328..10597
                     /locus_tag="ACJJDE_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HGG7541188.1"
                     /translation="MLKQSIEIINKLGLHARASNKFTQTASQFKSEVWVTKNDSRVNG
                     KSIMGLMMLAAAKGTVIELETDGADEAEAMRALTDLINGYFGEGE"
     gene            10597..12372
                     /gene="ptsP"
                     /locus_tag="ACJJDE_001263"
     CDS             10597..12372
                     /gene="ptsP"
                     /locus_tag="ACJJDE_001263"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HGG7541189.1"
                     /translation="MSIVLHGVAAGKGIAVGCAHLIARGTEEVPQYDVAEADTDAEAE
                     RFDAAVKATRKELEQLRSAIPENAPTELGAFISLHLMLLTDVTLSREPVDILREQKIN
                     AEWALKQQSDKLAAQFDNMDDAYLRERKQDMLQVVRRIHNNLIGQGNELEVADNLFDE
                     TVLIANDLSPADTVLFKEQRIAAFVTDAGGPTGHTAILGRSLDIPSVVGLHNARKLIT
                     EGETVIVDGINGVLIIAPDESVLNEYRRRAREYRSHKRDLNKLKKTAAATADGVCIEL
                     VGNIESAEDVKPLHNLGADGIGLFRSEFLYLNRDTMPSEDEQYEVYSAIVKKMKGKSV
                     TIRTVDLGVDKNPRWFGKNSTPNGSLNPALGMTGIRLCLAEPVMFRTQMRAILRAAVH
                     GPVRMMWPMITSVSEVRQCLIHLDTAQRQLAERGDAFGKVGIGCMIEIPSAALTVGSI
                     LKLVDFISVGTNDLIQYILSVDRGDDSVSHLYQPGHPAVLKMLQHVIRTANRMDKDVS
                     VCGEMAGDTAFTRVLLGMGLRRFSMNPNNILPVKNIILHSNVGQLESDIAKVIRCEDE
                     EKSEKLIKQMNSVSVEEEADFKGRK"
BASE COUNT         3126 a         3179 c         3564 g         2862 t
ORIGIN      
        1 ctgccgcaac cgtccgctga cggaaacgca aaccaaacat aaccgatatt tgtcgaagat
       61 ccgttatgtg gtcgaacaaa gcttcggtac gctgcaccgc aaattccgct atgcgcgggc
      121 agcctatttc gggctgatta aagtgagtgc gcaaagccac ctgaaggcga tgtgtttgaa
      181 cctgttgaaa gccgccaaca ggctaagtgc gcccgctgcc gcctaaaagg cagcccggat
      241 gcctgattat cgggtatccg gggaggatta agggggtatt ggggtaaaat taggaggtat
      301 ttggtacgaa aacagccgaa atcctgtgtt tgggtttcgg ctgtcgggag ggaaaggaat
      361 tttgcaaagg tctcagattg ggcaaaaatc aaaaacagta tagtggatta acaaaaatca
      421 ggacaaggcg acgaagccgc agacagtaca aatagtacgg caaggcgagg caacgctgta
      481 ctggtttttg ttaatccact atacatgaaa aaatagaaaa actgccgggt atggttgaat
      541 aaggggtcag accggttcca attcgctcag tccgggcaaa tctgcaaaac cgcgttcgcg
      601 tatgatttgg caaaaattgt tcagatagct cttgtccgta tcttcggtac ggatggcggc
      661 atacagtttg ctttgcaatc cgtcggcagt aatttggcgg tggacgacat agcctttttc
      721 aaggtagggc atgactgtcc aatagggaag ggcggcaatg ccacgtctgc tggcaaccag
      781 ttggataatg gcgatggtca gttcgctgtg tcggcgcggc gggttgatgt ttttcggaat
      841 caggattttt ttgggcaaat ccagcatctc gtcgggaacg ggataagtaa tcagggtttc
      901 cccgataaag tcttccgccg tccaaacgtt tttggcggca agcggatggt ctggtgcgca
      961 aatgccgacc atttcgtagg caaacagcgg ttggaaagaa atatcgtttt gtttttccgc
     1021 ttcggaaaca atggcaaggt cggcacggtg ttgcagcagc agtccgacgg gatccgcttg
     1081 gaatcccgat acgatatcca attcgacttg gggccacatc gggcggaatt cgcccatggc
     1141 gggcatcagc cagtcgaaac aggtatggca ttcgacggca atccgcaatt ctcctgcctc
     1201 tccttctata atgcgtgcca aatcacgttc tgcatcggta acttgaggca acaggtcgtg
     1261 agcgaggcgt aacagccttt ctccaaccgg ggtaaagcgc aagggcgtgg attttcgttc
     1321 gaacaacggt gcgccgtagt ggttttcaag catacggatt tggtgggaaa gtgcagattg
     1381 ggtaaggaaa acccgtttgg cggcaaggga gacgctgccg gtttcttcaa gtgccagcag
     1441 ggtcttgagg tggcgcagtt cgatgatgga atccatgagg tttcagacgg catattgaac
     1501 cggcgcatat taaaataatt catatgcggg tgcaaatcgg aaaaatgtga attccagaca
     1561 ttttgcgatt agaatgcccg cttgtttaaa gcgattagga aaaaagatgg tattgcgcag
     1621 ggattttctg acttggtgta atgaaacatt gcagacagcg ttgtttaaag attacgcccc
     1681 taacggtttg caggttgaag ggagggaata tatcgggaaa atcgttacgt cggtaacggc
     1741 aagcagggca gcgattgatt ttgctgtgga gcagaaggca gatttgcttt tggtacatca
     1801 cggtatgttc tggaaaaacg agttgccgac cgttactggt tggaaaaaag aacggattgc
     1861 cgcactgtta cggcacgaca tcaatatggc aggctaccat ctgcccctgg atgcacatcc
     1921 cacactgggc aacaatgccc aactcgccga cagattgggt tttgcgacag aaaaacggtt
     1981 cggcgaacaa aacctgctca actcgggcag cctgaaacaa gccaagacac tcggcgcatt
     2041 ggcggcgcat attgaaacag ttttgcaacg taagcctgtc gtcatcggca aacccgaacg
     2101 cgaaatccga cgggttgcat ggtgcagcgg cggggcgcag gggttttttc agacggcaat
     2161 agacgaaggt gtcgatctgt atttgacggg ggaaatctct gaagctcaat accaccttgc
     2221 caatgaaacg ggtacggctt tcatttcggc agggcatcac gcgacggaac gttacggcgt
     2281 acgcgcgctg gcagaatcgg cggcagaggt tttcgggttg gaagtgtgcc attttgacga
     2341 aaacaatccg gcttgagtct tgagaaatat cataaaactt taccttattt taaataatgc
     2401 tttgagtatc actgcaaact gggtaaaatt gcaacgttta atggctcggt attcccaaaa
     2461 tattaggacg actgaataat ggataatcaa gaaatcaaca acggccgccg ccgtttcctg
     2521 acactcgcga cctgcggcgc gggcggagtg gcagcattgg gtgtggcaac gccgtttgtg
     2581 gccagttttt tcccttcgga aaaagccaag gccgccggtg ctgccgtcga ggtggatgtc
     2641 agtaaaatcg aagcgggtca gctgctgacc gccgagtggc aaggcaaacc gatttgggtg
     2701 ctcaaccgta cagatcagca gcttaaagac ctgaaaggcc tgaacggcga acttaccgat
     2761 cccaattccg atgcggaaca gcagccggag tatgctaaaa acgagacccg ttcgattaag
     2821 ccgaacatcc ttgtcgccat cggtatctgc acccatttgg gctgctcgcc caccttccgt
     2881 cccgacattg cccccgccga tttgggtgca gactggaaag gcggcttctt ctgcccctgc
     2941 cacggttcga aattcgactt ggccggccgc gtatataaag gtgttcctgc cccgaccaac
     3001 ctggttgtcc cgccatataa atacttgagc gacacaacta tcttggtggg cgaagactaa
     3061 gaataaggaa cgataattat ggcaaaccaa accaatagca aagcaaaagc attgttaggc
     3121 tggatggacg ctcgtttccc cctgtctaaa atgtggaatg agcatttggc tcaatactac
     3181 gcaccgaaaa actttaattt ttggtactac ttcggctctt tggccctgct tgtcctcgtg
     3241 attcaaatcg tcagcggcat tttcctgacc atgaactaca aacccgacgg caacctgaac
     3301 gcctaccatc tgcctgctgc ctttactgca gtcgagtaca tcatgcgcga cgtgtccggc
     3361 ggttggatta tccgctacat gcattccacc ggcgcatctt tcttcttcat tgttgtttat
     3421 ctgcacatgt tccgtggttt gatttacggt tcgtacaaaa aaccccgtga gttggtgtgg
     3481 attttcggtt ctctgatttt cttggcattg atggcggaag cctttatggg ctacctgctg
     3541 ccttggggtc agatgtcctt ttggggggcg caggtaatta ttaacctgtt ctccgccatc
     3601 cctgttatcg gtccggattt gtccacttgg attcgcggcg acttcaacgt ttccgacgtt
     3661 accctgaacc gtttctttgc cctgcacgtt atcgcggtac ctctggtatt gctcggcttg
     3721 gttgtggcgc acatcatcgc cctgcacgaa gtgggttcta acaaccctga cggcgttgaa
     3781 atcaagaaaa acaaagacga aaacggtatc ccgcgcgacg gtatcccatt ccatccttac
     3841 tataccgtta aagacatctt gggtgtggtt gtattcctga ttgtcttctg tgccgtattg
     3901 ttcttcgcac cggaaggcgg cggctacttc ctcgaagcgc cgaacttcga tgcggcaaat
     3961 gcgctgaaaa cacccccgca cattgcgccg gtatggtatt tcacaccgtt ctacgccatt
     4021 ttgcgtgcga ttccctcgtt cttgggaacg caggtttggg gtgtaatcgg tatgggcgcg
     4081 gcggtcgtgt tgattgccct gctgccttgg ctggataggg gcgaggtgaa atccgtccgt
     4141 taccgcggcc cgattttcaa aaccgcattg gtcttgttca tcatttcctt tatcggtttg
     4201 ggtattttgg gcgcgatggt ggcaaccgat acgcgtactt tggtcgcgcg catcctgtcc
     4261 ttcgtctatt tcgcattctt cctgggtatg ccgttctata ccaagctgga taaaaacaaa
     4321 ccggttcccg aacgcgtaac catgagcacc gccaaacaaa aaatcatgtt ctttgtttac
     4381 gtcggcatta ccgccgtggg tgcttacctg tttgcaacca acatctgatg agggcagtca
     4441 aaatgaaaca agctatgaaa aattggtttg ctgccttgct gttggcagta cccatgggtg
     4501 cggcatttgc ttcgggcggt catgcacact atgagaaagt cgatatcgat ttgcgcgacc
     4561 aagtcagcct gcagcgcggc gcacaaatct ttaccaacta ttgcctgtcc tgccactcgg
     4621 caagcggtat gcgtttcaac cgtttgaaag acatcggttt gactgacgaa gaaatcaaga
     4681 aaaacctgat gtttaccacc gataatgtcg gcgatgtcat gcattcggcg atgaacccga
     4741 aagatgcggc aaaatggttt ggtgctgctc cgcccgattt gacattgatt gcgcgttcca
     4801 aaggtgcaga ctacctttac gcttatatgc gcggcttcta taaagatccg acccgtccga
     4861 gcggctggaa caatactgta ttcgataaag tcggtatgcc ccacccgttg tgggaacagc
     4921 aaggcgttca agccgttgag ttggatgcca aaggtcagcc ggttatggta aaagacgaac
     4981 acggcgagat gaagcctaag ctgtattggg aatctaccgg tttgcacagc cgccgtctgc
     5041 ctaacggcaa agtgatccaa aaagagtacg acgcatatgt acgcgatttg gtcaattacc
     5101 ttgtgtacat gggcgaacct gcacaactgc aacgcaaacg tataggctat gtcgtgatga
     5161 ttttcctatt tgcggttatg ctgcctttgg cgtatttcct gaaaaaagaa tattggaaag
     5221 acgtacacta agcgtttgga acaaaagggc aaatccttta gggtttgccc ttttttcatt
     5281 ttgcctgccg tttgaaaagc ctgaatccgt atgccgtctg aacatagctg caacatttca
     5341 gacggcatca ttctaaaaat gtcagacatc gggaacttaa tcagggtttg tggcagattg
     5401 atattgaatt aggaaaaggt ctgaaaccgc aagcagcatg gtaaggcgat gtcgaacagg
     5461 tttaaagcca atccgctata ttttttggag ctatgtcgaa caaacaggta gaatcggaat
     5521 aagcggcggt tttgtccggt gtgaaaatgt ttgaatatta ggatgattga tggaactgat
     5581 gactgttttg ctgcctttgg cggcgttggt gtcgggcgtg ttgtttacat ggttgctgat
     5641 gaagggcagg tttcagggcg agtttgccga tttgaacgcg caactggcgg aaaaggcggc
     5701 aagatgtgat tttgtcgaac aggcacacgc agaaattgca tcggaattgg ccgttttgga
     5761 cgggaaatac cgacatttgc aggacgaaaa ttatgctttg ggcaaccgtt tttccgcagc
     5821 cgaaaagcag attgcccatt tgcaggaaaa agaggcggaa tcggttcggc tgaagcagtc
     5881 gtatatcgag ttgcaggaaa aggcgcaggg tttggcggtt gaaaacgaac gtttggcaac
     5941 ccagctcgga caggagcaga aggcgtttgc cgatcaatat gccttggaac gccaaatccg
     6001 ccaaagaatc gaaaccgatt tggaagaaag ccgccaaact gtccgcgacg tgcaaaacga
     6061 cctttccgat gtcggcaacc gttttgccgc agccgaaaaa cagattgccc atttgcagga
     6121 aaaagaggcg gaagcggagc gtttgaggca gtcgcatatc gatttgcagg aaaaggcaca
     6181 gggtttggcg gttgaaaacg aacgtttgac aacgcaaatc gaacaggaac gccttgcttc
     6241 tgaagagaaa ctgtccttac tgggcgaggc gcgcaagagt ttgagcgatc agtttcaaaa
     6301 tcttgccaac acgattttgg aagaaaaaag ccgccgtttt accgagcaga accgcgagca
     6361 gcttcatcag gttttgaacc cgttaaacga acgcatccac ggtttcggcg agttggtcag
     6421 gcaaacctat gataaagaat cgcgcgagcg gctgactttg gaaaacgaat tgaaacggct
     6481 tcaagggttg aacgcgcagc ttcacagcga ggcaaaggct ttaaccaacg cgctgaccgg
     6541 tacgcagaat aaggttcagg gaaattgggg cgagatgatt ctggaaacgg ttttggaaaa
     6601 ttccggcctt cagaaagggc gcgaatatgt ggtgcaggcg gcggctgtcc gcaaagaaga
     6661 agacggcggc acgcgccgcc ttcagcccga cgttttggtt aacctgcccg acaacaagca
     6721 gattgtgatt gattccaagg tttcgctgac ggcttatgtg cgctatacgc aagcggcgga
     6781 tgcggatacg gcggcgcgcg aactggcggc acacgttgcc agcatacgcg cgcatatgaa
     6841 aggcttgtcg ctgaaggatt acaccgattt ggaaggtgtg aacacattgg atttcgtctt
     6901 tatgtttatc cctgtcgaac cggcctacct gctggcgttg cagaatgacg cgggattgtt
     6961 ccaagagtgt ttcgacaaac ggattatgct ggtcggcccg agtaccttgt tggcaacctt
     7021 gcggacggtg gcgaatattt ggcgcaacga acagcaaaat caaaacgcgc tggcgattgc
     7081 ggacgaaggc ggcaagctgt atgacaagtt tgtcggtttc gtacagacgc tcgaaagcgt
     7141 cggcaaaggc atcgatcagg cgcaaaacag ctttcagacg gcattcaagc aacttgccga
     7201 agggcgcggg aatctggtcg gccgcgccga gaaactgcgt ctgttgggtg tgaaggcaaa
     7261 caagcagctt gcacgcgatt tgaccgaacg tgccaatgaa acaacggcgt tgtcggaatc
     7321 tttggaatat gcggcagaag atgaagcagt ctgacttgtg cggaaaaata ttgtttcagc
     7381 aggggcggga atgccgaaag cgcggcgtaa ctgtaccggt tctgatttgg ggtttgtttg
     7441 aagtacttac caaagccttg tccggcgagg tacaccggca aggcggcggt tgtctgagcc
     7501 ttttgcgttt cagacggcat cagtgcagat gacgccgtct gaagaccgta gtgaagtcgg
     7561 ttagaaaaac ggattgtgcc gtttttcgtg tccgatggaa gtcatacgcc cgtgtccggc
     7621 gacaacttgc acggtttcgg ggagggcgaa taatttgttg cggatattat tgattaagtc
     7681 ggcgtggttg ccgcgcggaa aatcggttct gcctatggtt tcgtaaaaca gcacgtcgcc
     7741 cgcaatcagc agctccgctt cggcacaata gaaaaccacg tgtcccggcg tgtgccccgg
     7801 aatatgcagc acttggaagg cgtagcgtcc gactttgagc gtttcgcctt cttcgagcca
     7861 atggttcggc gcaaaggcgg gcgagacggg gaatccgtat tgcgcggtgg tttgcggcag
     7921 cgattggagc aggaattcat cgtccggatg cggcccgagg acagggactt tatgcgtttt
     7981 caacatttcg accacgccgc ccgcgtgatc gagatggccg tgcgtcagcc agattgccgt
     8041 gagcgtaagt ttgcggtttg ccaacgcttg cagcaggaac ggcacgtcgc cgccgacatc
     8101 ggtcaggacg gcttcgccgc tttcgtcgtc ccaaatcagg gtgcagtttt ggcggaaggg
     8161 ggtaacggag aggatttcgt aacgtagggt catggcgtgt tcctaaacgg tttttcagac
     8221 ggcatcgggt ttgccgtttg ttttatggcg gtttgccgcc tgtttggata ttgggggaat
     8281 cagatgatta agaagacaat cggcggcatc ataccgattt ttacggcggt tttcatccct
     8341 gcatcagcag gcgcggcgga tttgatgctg gcgcaggaat acaaagacca agagattgca
     8401 ggctgggcaa tgagcgagaa actcgacggc gtgcgcgcct attgggacgg aaagcacctg
     8461 ataagccgtc agggctacgc gtttacgccc cccaaaggct ttaccgcgca gtttccgcct
     8521 tatcctttgg acggcgaatt gtatagcgga cgcggtcagt tcgagcagat ttccgctacc
     8581 gtgcgttctg tttcttcaga ctggcgcggc atccgcctgc acgttttcga tgtacccaag
     8641 gcgcagggca atctctacca acgtttggca gtcgcaacgc agtggctgaa aacgcatccg
     8701 aacgcgccga ttaccatcat cccgcaaacc aaagtgcgcg accggcagca cgcgatggac
     8761 tttttaaaac aaatcgaagc gcagggcggc gaaggcgtga tgctgcgtca gcccgaatcc
     8821 cgttatagcg gcggcaggag cagccaatta ttgaagctga aaagccaata cgacgacgaa
     8881 tgcacggtaa cacggcacta tgagggcaaa gggcgaaacg ccggacggct gggcgcggtc
     8941 ggctgcaaaa accgacacgg cgaattccgc atcggcagcg gtttcaaaga caaagaccgc
     9001 gacaacccgc ccaaaatcgg cacactgatt acctaccgct accgtggttt tacgcggaaa
     9061 ggcacgccga aatttgccac atttgtgcgc gtgcgtaccg accgctgagc aggacggttc
     9121 agacggcagc cgatactttg gtttataatt ttccttttac cgaccgattc cgacatatga
     9181 ccgatttaga aaccaaacgc cttgaaacac aggcgatgct tgaaaacgcc gatcttttgt
     9241 tcgaccaagg ccaatgccgt gccgcactgc aaaaagtggc ggacgagatt acgcgcgatt
     9301 tgggcggcaa atatccgctg ctgctgcccg tgatgggcgg cgcggtggtg tttacggggc
     9361 agttgctgcc gctgttgcgt tttcccttag attttgatta tgttcacgtt tcccgttacg
     9421 gcgacaagct ggagggcggc gcgttcaact ggaagcgtat gcccgatgcg gaacaaatcc
     9481 ggggcaggca cgtcgtcgtg ctggacgata ttttggacga agggcatacg atgtccgcca
     9541 ttcaagccaa acttttggaa atgggtgcgg caagctgccg tgcggcggtg ttcgccaaca
     9601 agctgatcga caaacccaag cctatccgag ccgattatgt cggactggat gtgccgaacc
     9661 gttatgtttt cggttacggc atggatgcgg cgggctgctg gcgcaatctg ggcgagattt
     9721 acgcattgga cggaaaataa ggaagcgatg ccgtctgaag gcctttcaga cggcatcgcg
     9781 cccatacgcc ggtaggataa tgaagaacag gacgcatcaa tatgataggg cttttaatca
     9841 tcacacacga aaccataggc gaagcctacc gcaagctggc acatcatttt ttcccgggcg
     9901 ggctgcctga aaacgtccgc atactcggcg tgcagccgac ggaagaccaa gacgacatca
     9961 tcaacaacgc cattgccgcg cttcaggagt ttcccgacaa cgacggcgtg ctgattatga
    10021 ccgatatttt cggcgcgacc ccctgcaatg ccgcccgccg cctcgtgcgc gaaaacaaat
    10081 cggcgatttt gaccgggctg aacgcgccga tgatggttaa ggccgtccaa tattcgccgg
    10141 cggcggaaga ccttgccgcc tttaccgaat gcgtcaggga ggcggcggta aaaggcattt
    10201 tcgccatcac gtccgcgccc gaagatttgg tgtgccggcg cagcggcgat gccgtctgaa
    10261 gaagcggcag ggcaggaaaa cattttaaac ggcgtctgct gccgatatac ataacacggg
    10321 aatcgaaatg ctcaaacaat ccatcgaaat catcaacaaa ctcggactcc acgcccgcgc
    10381 gtccaacaag ttcacccaaa ccgcgtccca attcaaaagc gaagtctggg ttacgaaaaa
    10441 cgacagccgc gtcaacggca aaagcattat ggggctgatg atgctcgccg ccgccaaggg
    10501 tacggtcatc gaactggaga cggacggcgc ggacgaggcg gaagcgatgc gcgccctgac
    10561 cgacttaatc aacggctact tcggcgaggg cgaataatga gtatcgtgct gcacggcgtg
    10621 gcggcgggca aaggcattgc cgtcggttgc gcccacctga ttgcgcgcgg tacggaggaa
    10681 gtgccgcagt atgatgttgc ggaggcggac accgatgccg aagccgaacg tttcgatgcc
    10741 gccgtcaaag ccacgcgcaa agagttggaa cagctccgca gcgcaattcc cgaaaacgcc
    10801 ccgaccgagt tgggcgcgtt catctcgctg cacctgatgc tcttgaccga tgttaccttg
    10861 tcgcgcgaac ccgtcgatat tttaagggaa caaaaaatca acgccgagtg ggcattgaag
    10921 cagcagagcg acaaactcgc cgcccaattc gacaatatgg acgatgccta tttgcgcgaa
    10981 cgcaagcagg atatgctgca agtcgtccgc cgcatccaca acaacctgat cgggcagggc
    11041 aacgagttgg aagttgccga caacctgttt gacgaaaccg ttctgattgc aaacgacctt
    11101 tcgcccgccg acacggtttt gtttaaagag cagcgcattg ccgccttcgt taccgatgcc
    11161 ggcggcccca ccgggcatac ggcgattttg ggcaggagct tggacatccc gtccgtcgtc
    11221 gggctgcaca acgcgcgcaa actgattacc gaaggcgaaa cggtcattgt ggacggtatc
    11281 aacggcgtgt tgattatcgc gccggatgag tcggtgttga acgaataccg ccgccgtgcc
    11341 cgcgaatacc gcagccacaa acgcgatttg aacaagctca aaaaaaccgc cgccgccacc
    11401 gccgacgggg tctgcatcga gcttgtgggc aatatagaat ccgccgaaga cgtgaaaccg
    11461 ctgcacaacc tcggcgcaga cggcatcggg ctgttccgca gcgagtttct ttacctgaac
    11521 cgcgatacga tgccgtctga agacgagcag tacgaagtgt acagcgcgat tgtcaaaaaa
    11581 atgaaaggca aaagcgtaac gatacggaca gtcgatttgg gtgtggacaa aaacccgcgc
    11641 tggttcggga aaaacagcac gcccaacggc agcctcaacc ccgcgctggg catgaccggc
    11701 atccgcctgt gccttgccga accggtcatg ttccgcaccc agatgcgcgc catcctccgt
    11761 gcggcggtac acggccccgt gcggatgatg tggccgatga ttacctccgt atccgaagtg
    11821 cgccagtgcc tcatccacct cgacaccgcg caacgccagc ttgccgaacg cggcgatgcc
    11881 ttcggtaaag tcggcatcgg ctgtatgatt gaaattccgt ctgccgcgct gaccgtcggc
    11941 agtattttga aactggtcga tttcatctcc gtcggtacca acgacctgat tcaatacatc
    12001 ttgtccgtcg atcgcggcga cgacagcgtc agccacctct accagcccgg ccatcccgcc
    12061 gtgctgaaaa tgctgcaaca cgtcatccgt accgccaacc gcatggacaa agacgtatcc
    12121 gtatgcggcg agatggcggg cgataccgcg tttacccgcg ttttattggg tatggggctg
    12181 cgccgttttt ccatgaaccc caacaacatc ctgcccgtca aaaacatcat tctgcacagc
    12241 aatgtcggac agctcgaaag cgatattgcg aaagtcatcc gctgcgaaga cgaagagaag
    12301 tcggaaaagc tgatcaaaca gatgaacagc gtgtctgtcg aggaagaagc cgacttcaag
    12361 gggcggaaat aaatacggca ggtaaaaaat agaaatactt aacaatgccc gcaatctgaa
    12421 attttgccat tcttgcaaaa tagaaaaccg aaacagaaac ccaaaatcgg tcattccctc
    12481 aaaatcagaa acctaaaatc cgtcattccc gcgcaggcgg gaatctaggt ttgtcggcac
    12541 agaaacttgt cgggaaaaac ggtttcttta gattttacgt tctagattcc cgcttttgcg
    12601 ggaatgacgg cagggtggtt tctgttgctc ccgataaatg ccgccatctc aagtctcgtc
    12661 attcccttaa aacagaaaac cgaaatcaga aacctaaaat ccgtcattcc cgcgcaggcg
    12721 ggaatctagg t
//
LOCUS       DBBZXU010000052        12413 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.052, whole genome shotgun sequence.
ACCESSION   DBBZXU010000052 DBBZXU010000000
VERSION     DBBZXU010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.052"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..1186)
                     /gene="pilC"
                     /locus_tag="ACJJDE_001264"
     CDS             complement(<1..1186)
                     /gene="pilC"
                     /locus_tag="ACJJDE_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7541190.1"
                     /translation="MNKTLKRRVFRHTALYAAILMFSHTGGGGAQAQTRQYAIIMNEG
                     NQPEVQWNGSYSIKDKDRKREYTHHNHSRGGSSVSFNNSDELVSQQSGTAVFGTATYL
                     PPYGKVSGFDADGLNKRGNAAGWIRTTRIALAGYSYEGVVCRSGTGCPKLVYKTRFSF
                     DNPDLVKNAGRLDRHTDPSRENSPIYKLKDYPWLGVSFNLGAEGTTKDGKTINKLVSS
                     FDEKNSSNNNLVYTTEGRDISLGDWQREKTAMAYYLNAKLHLLDKKGIKDITNKTVQL
                     GVLRPSIDVRLQRNTGLAGLLNFWASWDIKDNGQIPVKLGLPEVKAGRCINKANPNPK
                     AQALSPALTAPALWFGAGQDGKAEMYSASVSTYPDSSSSRIFLQNLKRKNDPNKPGRY
                     SLA"
     gene            complement(2443..3522)
                     /gene="apbC"
                     /locus_tag="ACJJDE_001265"
     CDS             complement(2443..3522)
                     /gene="apbC"
                     /locus_tag="ACJJDE_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HGG7541191.1"
                     /translation="MNIQNIRTLLDTVAVPNTARTLGGEKAVRSVEQRSDGIHIALHF
                     GFPVAHIAAAVADSVQEILMPETGGAHIHLSIDTEIGTHKVQPGVTTIKGVKNIIAVA
                     SGKGGVGKSTTTANLAAAMARMGARVGVLDADLYGPSQPTMLGVDDRKPDQKNQKLIP
                     VESSDGIQVMSIGFLVDTDQAVVWRGPMVSQALQQLMFQSEWDEVDYLFIDLPPGTGD
                     IQLTLSQRIPVTGSVIVTTPQDIALIDARKAVDMFRKVNIPILGVLENMSVHICSNCG
                     HSEALFGTDGGKDLAARLNVPLLGQLPLSLPVREAMDGGTPAQLFDEHPAIARIYTDA
                     AFQIALGIADKGKDFSSRFPKIVVE"
     gene            3733..3808
                     /locus_tag="ACJJDE_001266"
     tRNA            3733..3808
                     /locus_tag="ACJJDE_001266"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3766..3768,aa:Lys,seq:ttt)
     gene            3887..4396
                     /locus_tag="ACJJDE_001267"
     CDS             3887..4396
                     /locus_tag="ACJJDE_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein disulfide oxidoreductase"
                     /protein_id="HGG7541192.1"
                     /translation="MKKKLLSGIKFAVQTALVFLLVSLFLDWVRKPEEPAGAAGRPLT
                     LLSGQRLTLGQFSRDKAVLVYFWGSWCGVCRYQSPIIDDLAADGVPVVGVAVRSGSAS
                     EVAAYMAKRGLGFPTVNDEDGGLARSWRIVATPAVVLVKNGKMVHYTTGISSYWGLRA
                     RIFQADVFG"
     gene            4740..5180
                     /gene="nadR"
                     /locus_tag="ACJJDE_001268"
     CDS             4740..5180
                     /gene="nadR"
                     /locus_tag="ACJJDE_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family adhesin repressor NadR"
                     /protein_id="HGG7541193.1"
                     /translation="MPTQSKHASINISLIQAREALMTQFRPILNQANITDQQWRIIRL
                     LAENGTLDFQDLANQACILRPSLTGILTRLEKAGLVVRLKPSNDQRRVFLKLTAEGEK
                     LYEEIGEEVDERYDAIEEVLGREKMLLLKDLLAELAKIEDALNS"
     gene            5295..5795
                     /gene="hpaC"
                     /locus_tag="ACJJDE_001269"
     CDS             5295..5795
                     /gene="hpaC"
                     /locus_tag="ACJJDE_001269"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042537 - benzene-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     reductase component"
                     /protein_id="HGG7541194.1"
                     /translation="MADLQKTFQTSFRDAMASCAAGVHVITTDGAAGRYGITMTAVAP
                     VTDEPPTVMLCINRSARIIPILSENGSLCINMLADEHQDVAEHFAGLTGLSPEERFAY
                     HIWHRGKTGQLEIEGALAHLHGHIVGKHEIGTHFVFYVRLDEIKNCGCKRPALLYFRR
                     QFRFLD"
     gene            5811..6506
                     /gene="murU"
                     /locus_tag="ACJJDE_001270"
     CDS             5811..6506
                     /gene="murU"
                     /locus_tag="ACJJDE_001270"
                     /EC_number="2.7.7.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate alpha-1-phosphate
                     uridylyltransferase MurU"
                     /protein_id="HGG7541195.1"
                     /translation="MKAMILAAGRGERMRPLTDTTPKPLLDVAGKPLIGWHLCRLKQA
                     GFTEIVINHAWLGRQIEEALGDGSAYGVNIAYSPEPAGGLETAGGIAQALPLLGDAPF
                     LVVNGDVLTDIDFTAAFQAASSLPEHISAHLWLADNPPHNPDGDFSLLPDGSVRPEVN
                     GGNGLTFSGVGIYRPEMFDGIEAGSVAKLAPVLRGEMRQNRVSGQKHTGLWLDVGTVC
                     RLKEAQALAGAWK"
     gene            complement(6752..7183)
                     /locus_tag="ACJJDE_001271"
     CDS             complement(6752..7183)
                     /locus_tag="ACJJDE_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter"
                     /protein_id="HGG7541196.1"
                     /translation="MGSNAWLFWALASAGFASLTAIFAKMGLQGIDSDFATFIRTLVI
                     LAALLLFLTYTGKWQGVNGFTGHNWTFLILSGLATGASWLAYFKALQLGNASQVAPVD
                     KFSLVLVALMAVVFLNERPSTQEWIGLGLVTAGVLVLALKR"
     gene            7358..9034
                     /locus_tag="ACJJDE_001272"
     CDS             7358..9034
                     /locus_tag="ACJJDE_001272"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HGG7541197.1"
                     /translation="MSFKTDAEIAQSSTMRPIGEIAAKLGLNADNIEPYGHYKAKINP
                     AEAFKLPQKQGRLILVTAINPTPAGEGKTTVTIGLADALRHIGKDAVIALREPSLGPV
                     FGVKGGAAGGGYAQVLPMEDINLHFTGDFHAIGAANNLLAAMLDNHIYQGNELNIDPK
                     RVLWRRVVDMNDRQLRNIIDGMGKPVDGVMRPDGFDITVASEVMAVFCLAKDISDLKE
                     RLGNILVAYAKDGSPVYAKDLKAHGAMAALLKDAIKPNLVQTIEGTPAFVHGGPFANI
                     AHGCNSVTATRLAKHLADYAVTEAGFGADLGAEKFCDIKCRLADLKPDAAVVVATVRA
                     LKYNGGVERANLGEENLDALAKGLPNLLKHISNLKNVFGLPIVVALNRFVSDSDAELA
                     MIEKACAEHGVEVSLTEVWGKGGAGGADLAHKVVNAIENQPNNFNFAYDVELGIKDKI
                     RAIAQKVYGAEDVDFSAEASAEIASLEKLGLDKMPICMAKTQYSLSDNAKLLGCPEGF
                     RIAVRGITVSAGAGFIVALCGNMMKMPGLPKVPAAEKIDVDEHGVIHGLF"
     gene            9148..10239
                     /gene="ychF"
                     /locus_tag="ACJJDE_001273"
     CDS             9148..10239
                     /gene="ychF"
                     /locus_tag="ACJJDE_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002642527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HGG7541198.1"
                     /translation="MSLKCGIVGLPNVGKSTLFNALTQSGIEAANYPFCTIEPNVGIV
                     EVPDPRMAELAKIVNPQKMQPAIVEFVDIAGLVAGASKGEGLGNQFLANIRETDAIVN
                     VVRCFDDDNIVHVAGRVDPIADIETIGTELALADLASVEKAIVREEKRARSGDKDAQK
                     LVDLCKKLLPHLDEGKPVRSFGLDAEERAMLKPLFLLTAKPAMYVGNVAEDGFENNPH
                     LERLKELAAKENAPVVAVCAAMESEIAELEDDEKAEFLAEMGLEEPGLNRLIRAGYDL
                     LGLQTYFTAGVKEVRAWTIHKGDTAPQAAGVIHTDFERGFIRAQVISYEDFIALGGEA
                     KAKEAGKMRVEGKEYVVQDGDVMHFLFNV"
     gene            10277..10606
                     /locus_tag="ACJJDE_001274"
     CDS             10277..10606
                     /locus_tag="ACJJDE_001274"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541199.1"
                     /translation="MPSEAGFGGFRRFHTAGMRLHQNKIPSAFPICPPRFLQNKPPAP
                     LLQKAVRHSEYPEPRYKMTFQTAFAPPRFEYSGLTLNQDKATKPQTVQIVRQGEATPY
                     WFKFNPL"
     gene            10614..11960
                     /locus_tag="ACJJDE_001275"
                     /pseudo
     CDS             10614..11960
                     /locus_tag="ACJJDE_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
     gene            12025..>12413
                     /locus_tag="ACJJDE_001276"
     CDS             12025..>12413
                     /locus_tag="ACJJDE_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7541200.1"
                     /translation="MSTFFQQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYRNWLAQDDTLSELLKLINRQLT"
BASE COUNT         2726 a         3298 c         3440 g         2949 t
ORIGIN      
        1 ctgcgaggga atagcggccg ggtttgttgg ggtcgttttt tcttttcaga ttttgaagga
       61 agatgcggct gctcgaactg tcggggtagg tggaaaccga agcggaatac atctccgcct
      121 taccatcttg cccagctccg aaccacagcg cgggggcggt caaggcgggg gaaagggctt
      181 gggctttggg attggggttc gctttgttga tgcagcggcc tgctttgact tccggcaggc
      241 cgagcttgac cggaatctgc ccgttatctt taatgtccca actagcccaa aaatttagca
      301 agccggcaag ccccgtattt ctttgcagcc gcacatcgat gctcggcctc aagacaccca
      361 actgcactgt tttgttggtg atatctttaa tccctttttt gtccagcagg tgcagtttgg
      421 cgttcagata ataggccatg gcggtctttt cgcgctgcca gtcgcccaag gaaatatcgc
      481 ggccttccgt ggtatagacg aggttgttat tactactatt cttttcatca aaagaagata
      541 ccaatttgtt gattgtctta ccatctttgg tggtaccctc ggcacccaaa ttgaaagata
      601 cgcccaacca tggataatcc ttcaatttgt aaatgggcga attttcgcgg cttgggtctg
      661 tgtgcctatc cagcctgccc gcatttttta ccaagtcggg attatcgaag gaaaatcggg
      721 ttttatagac aagtttggga cagcctgtgc cgcttctgca tacgacacct tcgtagctgt
      781 agcctgccag cgcgatgcgg gtggtacgaa tccaaccggc ggcattgccg cgcttgttca
      841 gcccgtcggc atcaaaaccg gaaaccttgc cgtagggcgg caggtaggtg gctgtgccaa
      901 aaacggcagt accgctttgt tgagaaacaa gctcatcgct attgttgaat gagacagagc
      961 ttcctcctcg tgagtgatta tgatgagtat attcgcgctt cctgtctttg tcctttattg
     1021 aatatgaccc attccactgt acctcgggct ggtttccctc gttcatgata atagcgtatt
     1081 gacgggtttg cgcctgcgcc ccccccccgc cggtatggga aaacatcaag atggcggcat
     1141 aaagcgcggt atggcggaaa acccgccttt ttaaagtttt attcatcgta tttccttttc
     1201 ggtcaaaccc cccgcccttc gggcatccgt ccttcggggc ggcaggatca ggctttgtcc
     1261 gggaggggtg caagcccttc cgaatcaggg cggcgcctta tgtgccgccc tgtgtgttgg
     1321 aacatatttt atcccttaaa tcttgcttcg cgggataccg tcggcggcag gcgcgccgca
     1381 aacggcggga ttcggcaaac cgcccgattc cgcgcccgcc gaattgctgg ttggaaaacc
     1441 cctttggccc ggctgccaaa gggggatgtt cggaaaagta acacgcccct ttggccggat
     1501 gcaatgtata gggttaccgc attattctac ccttgcgcgc tgatcatggt aaagcggttt
     1561 tcggcaatcc gcaaccgcct ccttggcccg ccattgccgc gaaagcggga atccggaacg
     1621 taaaatctca aaaaaaccgt tttatccggc aagtttgccc gccggcaggc ccgccattgc
     1681 cgcctgcgcg gcaatggcgg gccggggagg cggcattttc caagttgcgg caatctttcc
     1741 caacaactca accgccccaa tacaagcctt tcggcttgtt gccctctctc tagctctctc
     1801 ccacagggag agaggacggg tcggctgttg gggttgaggt ttgctgcaag gaaaacaggt
     1861 tgtgcaggct gctttttatt tttcagacga cctgaaacaa cagctgcaaa tctaagttgc
     1921 ctttcaaatc gcctgcaacc gaaaaatctg ccgaaaccca ctccctcccc cgtgggggag
     1981 ggccggggag gcggcatttt ccaagttgcg gcaacctttc ccaacaactc aaccgcccca
     2041 atacaagcct ttcggcttgt tgccctctct ccagccctct cccacgggga gagaggacgg
     2101 ggaggctgtt ggggttaagg gttttgtaaa ctaatcaggt tgtgcaggct gctttttgct
     2161 tttcagacga cctgcatcaa cggttgtaaa tccaatctgt ttttcaaacc gcctgcaacc
     2221 gcaaaacctg ccgcaatccg ctccctcccc tgtgggggag ggccggggag agggcattct
     2281 ccaagttgcg gcaatctttc ccaacagctt aaccgcccca atacaagcct tgcggcttgt
     2341 tgccctctct ccagccctct cccacgggga gagaggacta tgaagcccgc cggcaggcgc
     2401 ggggcttggg acggcattgc tgttgcggtt tcggacgcgg ctttattcga cgacgatttt
     2461 agggaaccgg ctgctgaagt ctttgccttt gtcggcaatg cccagggcga tttggaatgc
     2521 ggcatcggtg tagattcggg cgatggcggg gtgttcgtcg aacagttgcg ccggtgtgcc
     2581 gccgtccatg gcttcgcgca cgggcaggct taagggaagc tgtccgagca gggggacgtt
     2641 gaggcgtgcc gccaaatctt tgccgccgtc cgtgccgaac agtgcttcgc tgtgtccgca
     2701 gttggagcag atgtggacgg acatattttc caatacacct aaaatgggaa tgttgacttt
     2761 tcggaacata tccacggctt tgcgcgcgtc tatcagggcg atgtcctgcg gcgtggttac
     2821 gatgaccgat ccggttacgg ggatgcgttg ggacagcgtg agttggatgt cgcccgtgcc
     2881 ggggggcagg tcgataaaca ggtagtccac ttcgtcccac tcgctttgaa acatcagttg
     2941 ctgcaaggct tggctgacca tcggcccgcg ccagacgacg gcttggtcgg tatcgacgag
     3001 aaagccgata gacatgacct gtatgccgtc tgaagattcg acgggaatga gtttttggtt
     3061 tttctgatcg ggtttgcggt cgtccacacc caacatggtc ggttggctcg ggccgtaaag
     3121 gtcggcatcg agcacgccga cgcgcgcgcc catccgcgcc attgcggcgg caaggttggc
     3181 ggtggttgtt gatttgccca cgccgccttt gccggaggcg acggcaatga tgtttttcac
     3241 acctttgatg gtggtaacgc caggttggac tttatgtgtg ccgatttcgg tgtctatgga
     3301 cagatggatg tgcgcgccgc ctgtttcggg catcaggatt tcttgtacgg aatcggcgac
     3361 ggcggcggcg atgtgcgcga cagggaagcc gaaatgcagg gcgatatgga tgccgtctga
     3421 acgctgttcg accgaacgga cggccttttc gccgccgagc gtgcgtgccg tattcggaac
     3481 ggcgacggtg tcgaggaggg tgcggatgtt ttgtatgttc ataatgtgtg tttctgtgtg
     3541 cagtttggga aacgggcgga aagtgtacat tgatttcggg cggtttgcct ttccttgtgc
     3601 gaacttttac acggtatgcg gcggattgtg aaaatccgtt gtcaaaatat cccgtgcaaa
     3661 cagtggtctg caattaagcc tgtaaaattt gcttgacgag gcaggatggt gctgtataat
     3721 gcacggctta tcgggtcgtt agctcagtcg gtagagcagc ggacttttaa tccgttggtc
     3781 gagcgttcga atcgctcacg acccaccaga taaccggaag ccaagttttg agacttggct
     3841 ttttgtttgc ctgccggttg cgcgggcgta ccgtttgaga gagcgtatga aaaagaaact
     3901 gctttcgggc atcaaatttg ccgttcagac ggcattggtg tttttattgg tgtcgctgtt
     3961 tttggattgg gtacgcaagc ccgaagagcc ggccggtgcg gcagggcggc ctttgaccct
     4021 gctgtcgggg cagcggctga ctttgggaca gtttagccgg gataaggcgg ttttggtgta
     4081 tttttggggg agctggtgcg gcgtgtgccg ttatcagtcg ccgataatcg atgatttggc
     4141 ggcggacggc gtgccggtcg tcggcgtggc ggtacgttcc ggcagcgcgt ccgaagtggc
     4201 ggcgtatatg gcaaagcggg gcttgggctt tccgactgtc aacgatgagg acgggggttt
     4261 ggcaaggtct tggcggattg tcgcaacgcc agccgtcgtt ttggtcaaaa atgggaaaat
     4321 ggttcactat acgacgggaa tcagcagtta ttggggcttg cgcgcacgaa tttttcaggc
     4381 ggatgttttc ggttaacttt tgtttttgtt aaactttacg ctatgtagag aatcaaacgg
     4441 catatacctt gctcgtctga tgcggcggct tttgtttttt ctggaagaaa gttctttcga
     4501 cagtaaatgt aatactttgt tgagattgta gggaaaatag actaagatat aactattaaa
     4561 atatttttag ataggattat cggaattaaa gtcttttata cccagtcgtc cgatgcggtt
     4621 tatagcgtat tgttgctata tgttcgtttt gttatataac ggttgcatca aaatttacgc
     4681 ccacaggttt tcccgacggt ttgaaagttt gattttcgat aacttggaga cttaaaacaa
     4741 tgcctaccca atcaaaacat gcgtctatca atatcagtct gatacaggca agggaagccc
     4801 tgatgaccca attcaggcct attctgaatc aggcgaatat taccgatcag caatggcgga
     4861 ttatccgtct tttggcggaa aacggcacgc tggactttca agatttggcg aatcaggcgt
     4921 gtattctgcg ccccagcctg accggtatcc tgacccgcct tgaaaaagcg ggtttggttg
     4981 tccgcctgaa accttccaac gaccaacgcc gcgtttttct gaagctgact gccgagggcg
     5041 agaagctgta tgaggaaatc ggcgaagaag tggacgagcg ttacgacgct atcgaggaag
     5101 tgctgggccg cgagaaaatg ctgctgctta aagacctgtt ggcagaactt gccaaaatcg
     5161 aggatgcgtt gaactcgtaa tacgccgtaa cgcgcggaaa cgtccgaccg acggcttttt
     5221 gaatcagaac tgctgcacat ggggggtgcc ttgtgtgcag cattcttata taggggacag
     5281 tttaaagggg aaaaatggcg gatttgcaga aaacttttca aacttcgttc cgtgatgcga
     5341 tggcatcctg tgcggcaggc gttcatgtca tcacgacaga cggtgcggca gggcgttacg
     5401 gcattacaat gacggcggtc gcgccggtta ccgacgagcc gccgaccgtg atgctgtgca
     5461 tcaaccggag tgcgcgaatc attccgatcc tgtcggaaaa cggcagcctc tgcatcaata
     5521 tgctggcgga cgaacatcag gatgttgccg aacattttgc cgggctgacc ggcctgtcgc
     5581 ccgaagagcg gtttgcctac catatttggc atcgcggcaa aacgggacaa cttgaaatag
     5641 aaggcgcgtt ggcgcacctg cacgggcata ttgtcggcaa acatgaaatc ggcacgcatt
     5701 ttgtgtttta cgtcaggctc gacgaaatca aaaactgcgg gtgcaaacgc cccgcgctgc
     5761 tgtatttcag acggcagttt agatttttag actgatattc ggacagatat atgaaagcga
     5821 tgatactggc ggcaggacgc ggcgagcgta tgcgcccttt gaccgatacc actccgaagc
     5881 cgctgctcga tgtggcgggt aagcctctaa tcggttggca cctatgccgt ctgaagcagg
     5941 cggggtttac cgaaatcgtc atcaaccatg cttggttagg tcggcagata gaagaggctt
     6001 tgggcgacgg ctcggcttat ggcgtgaaca tcgcctattc gcccgaaccc gcaggcggct
     6061 tggaaacggc aggcggcatc gcgcaggcat tgccgctgtt gggcgatgcc ccgtttttgg
     6121 tcgtcaatgg cgacgtgctg accgacatcg attttaccgc cgcgtttcag gcggcatcgt
     6181 ccctgcccga gcacatttcc gcccatctgt ggctggcgga caatccgccg cacaaccccg
     6241 acggcgattt ttccctgctg cccgacggca gcgtgcggcc ggaagtaaat ggcggcaacg
     6301 gattgacatt tagcggcgtg ggtatttacc gtcctgaaat gtttgatgga atcgaagcgg
     6361 gcagtgtggc gaaactcgcg cccgtattgc ggggcgaaat gcggcaaaac cgcgtcagcg
     6421 gacagaagca tacgggcttg tggctggatg tcggcacggt atgccgtctg aaagaggctc
     6481 aagcccttgc aggggcttgg aagtgaaata aaacggtggc ttgccgagcc ggctgccgaa
     6541 cggttccgac cggatgtccg gcatattttc gtggaggcgt gaaaataggg cgttcggggc
     6601 tttccgtcca acaaatgcca tctgaagccg acccctgtcg gatgcggcgg tttgccgtcg
     6661 gcgcggtgtc ggattttatt gggtaacttt gttcagaccg ccgcccgtca gattgtcaaa
     6721 acccggtttc aggcggtatg gcggattcgg tttaacgttt caacgccagc accaacacgc
     6781 ccgccgttac cagccccaag cctatccatt cctgcgtgct ggggcgttcg ttgaggaaga
     6841 ctactgccat cagggcgacc agaaccaggc tgaatttatc gacgggggcg acttgcgagg
     6901 cgttacccag ttgcagggct ttgaagtagg caagccaaga tgcgccggta gcaaggccgg
     6961 ataggataag gaatgtccag ttgtgccccg taaagccgtt cacgccctgc catttgccgg
     7021 tgtaggttaa aaacaataac aaagcggcga ggatgaccaa ggtgcggatg aaggtagcga
     7081 aatccgaatc tatgccctgc aagcccattt tggcgaaaat agcggtcaat gaggcgaagc
     7141 ctgccgatgc caatgcccaa aacagccatg cgttgctgcc catgttttct ccttggattg
     7201 tgaacaatat gaacggtatt tttgttgcag cgtcaaaaat ttcactgcgg gtttggtgcg
     7261 gataacgtta taatatgcct gatattattt tcaatccacc tgtttgtcgc ctgatgcttt
     7321 cagacggcat gtccctcctc atttctaaag gaaaatcatg agcttcaaaa ccgatgccga
     7381 aatcgcccaa tcctccacca tgcgcccgat tggcgaaatt gccgccaagc tgggtctgaa
     7441 tgccgacaac attgagcctt acggtcatta caaggcgaaa atcaatcctg ccgaagcgtt
     7501 caaactgccg caaaaacagg gcaggctgat tttggttacc gccattaatc cgactccggc
     7561 gggcgaaggc aaaaccaccg taaccatcgg tttggcggac gcgttgcgcc acatcggcaa
     7621 agatgccgtg attgccctgc gcgaaccttc tctggggccg gtgttcggcg tgaaaggcgg
     7681 cgcggcaggc ggcggctatg cccaagtttt gccgatggaa gacatcaatc tgcactttac
     7741 cggcgacttc cacgccatcg gtgcggcgaa taacctgctc gccgccatgc tcgataacca
     7801 tatctaccaa ggcaacgagt tgaacatcga tccgaaacgc gtgctgtggc ggcgcgtggt
     7861 cgatatgaac gaccgccagt tgcgcaacat catcgacggc atgggcaaac ctgttgacgg
     7921 cgtgatgcgt cctgacggtt tcgacattac cgttgcttcc gaagtgatgg cggtattctg
     7981 ccttgccaaa gacatcagcg atttgaaaga gcgtttgggc aacatccttg tcgcctacgc
     8041 caaagacggc agccccgttt acgccaaaga tttgaaagca cacggcgcga tggcggccct
     8101 gctcaaagat gcgattaagc ccaacttggt acaaaccatc gaaggcactc cggccttcgt
     8161 acacggcggc ccgttcgcca acatcgccca cggctgcaac tccgtaaccg caacccgtct
     8221 ggcgaaacac cttgccgact acgccgtaac cgaagcaggc ttcggcgcgg atttgggtgc
     8281 ggaaaaattc tgcgatatca aatgccgtct ggcggattta aaacctgatg cggctgttgt
     8341 cgtggctact gtccgcgctt tgaaatacaa cggcggcgtg gaacgcgcca acctcggcga
     8401 agaaaattta gacgctttgg caaaaggtct gcctaatctg ctgaaacaca tttccaacct
     8461 gaaaaacgta ttcggactgc ccatcgtcgt tgcgctcaac cgcttcgtgt ccgactccga
     8521 tgccgagttg gcgatgattg aaaaagcctg tgcggaacac ggcgttgaag tttccctgac
     8581 cgaagtatgg ggcaaaggcg gcgcgggtgg tgcagacttg gcgcacaaag tcgttaacgc
     8641 catcgaaaac caaccgaaca acttcaattt tgcctacgat gtcgagttgg gcatcaaaga
     8701 caaaatccgt gcgattgccc aaaaagtgta cggcgcggaa gatgttgatt tcagcgcgga
     8761 agcgtctgcc gaaatcgctt cactggaaaa actgggcttg gacaaaatgc cgatctgcat
     8821 ggcgaaaact caatactctt tgagtgacaa cgccaaactg ttgggctgcc ccgaaggctt
     8881 ccgcatcgcc gtgcgcggca tcaccgtttc cgccggcgcg ggcttcatcg tcgcgctgtg
     8941 cggcaatatg atgaagatgc cgggtctgcc gaaagttccg gccgccgaga aaatcgatgt
     9001 ggacgaacac ggcgtgattc acggcttgtt ctgaacggtt tttgaaaccg gatgccgtct
     9061 gaagccgttt cagacggcat tttttcggaa cgcgggcggc ggtatgctat aatccgccgt
     9121 taaatttctc tattttcagg aaaaaacatg agtttgaaat gcggcatcgt cggtttgccc
     9181 aacgtcggca aatccaccct ctttaacgcg ctgacccaat cgggtatcga agcggcaaac
     9241 tatcctttct gtaccatcga acccaacgtc ggcatcgtcg aagtgcccga cccgcgtatg
     9301 gctgaattgg caaaaatcgt caatccgcaa aaaatgcagc ctgccatcgt cgaatttgtc
     9361 gatatcgccg gtttggttgc aggcgcgagc aaaggcgaag gtctgggcaa ccagttcctt
     9421 gccaacatcc gcgagactga cgcgattgtt aacgtcgtac gctgctttga cgacgacaac
     9481 atcgtccacg ttgcaggccg cgtcgatccg attgccgaca tcgaaaccat cggtacagag
     9541 ttggcgcttg ccgacttggc aagtgtggaa aaagccatcg tccgcgaaga aaaacgcgcc
     9601 cgttcaggcg acaaagacgc gcaaaagctg gtcgatttgt gcaaaaaact gctgccgcat
     9661 ctagacgaag gcaaacccgt gcgttccttc ggtttggacg cggaagaacg cgcgatgctc
     9721 aaaccgctgt tcctgctgac cgccaaaccg gcgatgtatg tgggcaacgt cgccgaagac
     9781 ggttttgaaa acaatccgca cctcgaacgc ctgaaagaat tggcggcaaa agaaaacgcc
     9841 cccgtcgtcg ccgtttgcgc cgcaatggaa agcgaaatcg ccgaattgga agacgacgaa
     9901 aaagccgagt tcctcgccga aatgggcttg gaagaaccgg gcctgaaccg cctgatccgc
     9961 gcgggctacg acctcttagg cctgcaaacc tacttcaccg ccggcgtgaa agaagtccgc
    10021 gcttggacca tccacaaagg cgacaccgcc ccgcaagccg ccggcgtgat tcacaccgac
    10081 tttgaacgtg gcttcatccg cgcccaagtt atctcctacg aagacttcat cgctttaggc
    10141 ggcgaagcca aagccaaaga agccggcaaa atgcgtgtgg aaggcaaaga atacgtcgtg
    10201 caggatgggg atgtgatgca ctttttgttt aacgtgtaac ccaaatgcgg caggttttca
    10261 gacggctttg ccagaaatgc cgtctgaagc cggttttggt ggttttcggc gtttccatac
    10321 cgccggaatg cggctgcatc aaaataaaat cccgtccgca tttccgattt gccctccccg
    10381 attcctgcaa aacaaaccgc ctgccccgct gttgcaaaaa gccgtccggc attccgaata
    10441 tcccgagccc cgatacaaaa tgacctttca gacggcattt gcgccgccgc gtttcgagta
    10501 tagtggatta actttaaatc aggacaaggc gacgaaaccg cagacagtac agatagtacg
    10561 gcaaggcgag gcaacgccgt actggtttaa atttaatcca ctataaaaac attatgagcc
    10621 aagccttacc ctaccgcccg gacatcgaca cattgcgcgc cgccgccgtt ttgtccgtca
    10681 tcgtgttcca tatcgaaaaa aattggctgc cgggcggatt tctcggtgtc gatatattct
    10741 ttgtgatttc aggctttttg atgacggaga tcctccttcg cgaaatgtcg ggggggggga
    10801 ggttttccct gaaggcattt tatatccgcc gcatcaagcg gattctgccc gcatttttcg
    10861 ccgtattggc ggcaacgctg gcaggcggct tctttttatt caccaaagat gatttctttc
    10921 ttttgtggaa atccgcgctg accgccttgg gtttcgcctc taacctgtat tttgcaaggg
    10981 ggaaggatta tttcgatccc gcgcaggaag aaaagcccct gctgcacatc tggtctttgt
    11041 cggtcgaaga acaattttac tttgtctttc cgatactgct gctgcttgtc gcccgcaaaa
    11101 gcctgcgcgt acagttcggc ttccttgccg cactgtgtgc cttaagcctt gccgcctcct
    11161 ttataccttc cgcgctcgat aaatattacc tgccccacct gcgcgcctgc gaattactga
    11221 taggatcgct gaccgccgtg tggatgcggt accggcaaca gcggaatctc gccgtcggga
    11281 aacggtatgc cgccgtcggc gcattgtttt ccgcgtgcat actgtccgcc tgcctgtttg
    11341 cctattcgga acaaaccgcc tatttcccag gccccgccgc tttgattccc tgtctggctg
    11401 ttgccgcgct gatttatttc aaccattacg aacacccgct taaaaaattt ttccaatgga
    11461 aaatcaccgt tgccgccggt ttgatttcct attcgcttta tctgtggcat tggccgatat
    11521 tggcctttat gcgctatatc ggcccggaca acctgccgcc ttattcgccg gcggcagcga
    11581 tcgtcctgac tctagcgttt tccctgattt cttatcactg catcgaaaag ccgtttaaaa
    11641 aatggaaagg ttcgttcgca caatccgttt tatggattta tgccttgcct atgctcattt
    11701 tgggggcggg ctcgtttttc gcgatgaggc tgccgtttat ggcgcaatac gaccgcttgg
    11761 ggctgacgcg ttccaacacc tcctgccaca acaataccgg caaacaatgc ctatgggggg
    11821 atacggaaaa acagccggaa ctgctggttt tgggcgattc ccacgccgac cattacaaaa
    11881 cattcttcga tgccgtgggc aaaaaagaaa aatggtccgc cacaatggtt tccgccgacg
    11941 cttgcgccta tgtggaaggc tgagaccttt gcaaaatccc ccaaaatccc ctaaattccc
    12001 accaagacat ttaggggatt ttccatgagc accttcttcc agcaaaccgc ccaagccatg
    12061 attgctaaac acatcaaccg cttcccgcta ttgaagttgg accaggtgat tgattggcag
    12121 ccgatcgaac agtatctgaa tcgtcaaaga acccgttacc ttagagacca ccgcggccgt
    12181 cccgcctacc ccctgttgtc catgttcaaa gccgtcctgc tcggacaatg gcacagcctc
    12241 tccgatcccg aactcgaaca cagcctcatt acccgcatcg atttcaacct gttttgccgc
    12301 tttgacgaac tgagcatccc cgattacagc accttatgcc gctaccgcaa ctggctggcg
    12361 caagacgaca ccctgtccga attgctcaaa ctgattaacc gacaactgac cga
//
LOCUS       DBBZXU010000053        12397 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.053, whole genome shotgun sequence.
ACCESSION   DBBZXU010000053 DBBZXU010000000
VERSION     DBBZXU010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12397)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12397)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12397
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.053"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..334
                     /locus_tag="ACJJDE_001277"
     CDS             <1..334
                     /locus_tag="ACJJDE_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HGG7541201.1"
                     /translation="DASGLGEKIKDGKKTVLSCEEEQKICNTFTNKQAVEDFSVVIGY
                     DEIKAKNHSLSAGQYFEVKIDYVDISADEFAQKMAGFSADLDKLFAESAELEKEIKDR
                     LAMLKFNS"
     gene            366..482
                     /locus_tag="ACJJDE_001278"
     CDS             366..482
                     /locus_tag="ACJJDE_001278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
                     /protein_id="HGG7541202.1"
                     /translation="MPSESLSDGILFGLENTYAVLSLKERIQKTKATGIYRK"
     gene            complement(642..1979)
                     /gene="ribBA"
                     /locus_tag="ACJJDE_001279"
     CDS             complement(642..1979)
                     /gene="ribBA"
                     /locus_tag="ACJJDE_001279"
                     /EC_number="3.5.4.25"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA];
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP
                     cyclohydrolase II"
                     /protein_id="HGG7541203.1"
                     /translation="MTDTAGLRRRNLRQWIAEHYGGLQTRFAEAVALNTGELSALLKN
                     KSFGEKKARKIEQAAKMPAFWLDTEHTARPPEHTGKHTMSHISPIPEILADIKAGKMV
                     IITDAEDRENEGDLLMAAQFVTPEAINFMIKHARGLVCLPMDGEMVEKLGLPMMTQKN
                     GAQYGTNFTVSIEAAHGITTGISAADRALTIQTAVSPTAKPEDIVQPGHIFPLRAQKG
                     GVLVRAGHTEAGVDLAQMNGLIPASVICEIINDDGTMARMPELMKFAEEHKLKIGTIA
                     DLIEYRSRTESLLEDMGNAPVQTPWGEFQQHVYVDKLSGETHLALVKGTPSADTETLV
                     RVHEPFSVMDFIQANPRHSWSLPKALERIQQAESGVVILLHRTEDGAALLDRTLPKGA
                     NQAYKWDSKSYGIGAQILAGLNVKKLRVLGQPSSFTGLTGFGLEVVGFEEAEK"
     gene            2088..2222
                     /locus_tag="ACJJDE_001280"
     CDS             2088..2222
                     /locus_tag="ACJJDE_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541204.1"
                     /translation="MPSEAGFVASDGIAAILAGRGLFVPTSRALLIWGLPEAYSEKNF
                     "
     gene            complement(2201..3214)
                     /locus_tag="ACJJDE_001281"
     CDS             complement(2201..3214)
                     /locus_tag="ACJJDE_001281"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7541205.1"
                     /translation="MIFSIIVPIYNVEKYLRCCVDSVLAENFADYEMILVDDGSPDGC
                     GKICDEYAGKYPHIKVIHQENGGLSDARNAGIRAAKGDYLIFLDSDDYWADTNRSKNA
                     GGGILFDLQQLADKKVDLILHPSSLNYHVIPKGADFSDNDFVRHFETLVEGRYYIANA
                     WTKIVRREIIIKNNLFFPKGYIHEDFPYSLKLARFVKTFAFYDNPFYQYRVLGNSISH
                     NVKYKNFSDMLAHLDRGVDFLVENKNSPIYGGLQKFVFDNIGYLRSILVRLYFSKNII
                     LIYRKYFSFKEKCRKIFGAKTIRPVFIGKTAFIIGLPILRLLVPPMLYPAIKAVYQKF
                     FSE"
     gene            complement(3370..3963)
                     /gene="ribA"
                     /locus_tag="ACJJDE_001282"
     CDS             complement(3370..3963)
                     /gene="ribA"
                     /locus_tag="ACJJDE_001282"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003935 - GTP cyclohydrolase II activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HGG7541206.1"
                     /translation="MSELLNYVASCRLPTEWGVFTMHGFEEANGQEHVALTVGDFSDG
                     NPVLTRIHSECLTGDALFSRKCDCGPQLEAAMRAVQTEGRGIIVYLRQEGRGIGLINK
                     IRAYHLQDQGMDTVEANLALGLPVDARDFRLAQSIYEYLGIRSVKLLTNNPEKIQTLK
                     DAGINVVERIPLHVGENLENKRYLQTKADKLGHLMSE"
     gene            complement(3956..4630)
                     /locus_tag="ACJJDE_001283"
     CDS             complement(3956..4630)
                     /locus_tag="ACJJDE_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541207.1"
                     /translation="MPAALIKDFLLTQGLKLPLDEVRTAYLTAQTVMDMGTTSIERSV
                     LWLEHEDWRLADYLEQNSGNEEGLKRLFMALDSVFSRCKGVRAAAVYALMPSENAAFR
                     LVCLSRQGEVLENLWDLDEAAGKVSLACRSAQSGWMNVASDVRRWLDLGELSGERNHA
                     SAAQISIPVCTESGGVLGVVHVEFECAECAGTAAQVEWVALALALSEPLKQLLGITAA
                     EGDENV"
     gene            4784..4868
                     /locus_tag="ACJJDE_001284"
     tRNA            4784..4868
                     /locus_tag="ACJJDE_001284"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4818..4820,aa:Leu,seq:tag)
     gene            5388..6422
                     /gene="purM"
                     /locus_tag="ACJJDE_001285"
     CDS             5388..6422
                     /gene="purM"
                     /locus_tag="ACJJDE_001285"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HGG7541208.1"
                     /translation="MSTSLSYRDAGVDIDAGDQLVENIKPFAKRTMRPEVLGDLGGFG
                     ALVEIGKKYKNPVLVSGTDGVGTKLKLAFDWDKHDMVGIDLVAMSVNDILVQGAEPLF
                     FLDYFACGKLDVPRATDVIKGIAQGCEESGCALIGGETAEMPGMYPVGEYDLAGFAVG
                     VVEKENVITGRSIGAGDVVLGLASNGAHSNGYSLIRKIIERDNPDLDAEFDNGKTLRE
                     AVIAPTRLYVKPILAALEKFTIKGMAHITGGGITENVPRVLPENTVAQIDAKSWELPK
                     LFQWLQKAGNVETQEMYRTFNCGIGMVVIVAAEDADAVQGLLGEQGETVYRLGLIRER
                     QGDEHQTQVA"
     gene            complement(6896..7552)
                     /locus_tag="ACJJDE_001286"
     CDS             complement(6896..7552)
                     /locus_tag="ACJJDE_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HGG7541209.1"
                     /translation="MTIKIILIDDHTLFRSGIKALLSRQHGFEVIGEAADGLSGIKMI
                     SRLQPDVVLLDLNMPGMNGREALSQIISINPQQAVIMLTVSEDSDDLTECIRIGARGY
                     LLKNINADFLLESIRKAAEGDNVFSPEMTAKLVKSLISPQPAQGTQALSSLTPRELEI
                     LGYLAAGHSNKIIARHLDLAESTVKVHVQNLLRKLNLSSRVQAAVYAIRHNVPQPVPE
                     "
     gene            complement(7549..9321)
                     /locus_tag="ACJJDE_001287"
     CDS             complement(7549..9321)
                     /locus_tag="ACJJDE_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite sensor histidine kinase"
                     /protein_id="HGG7541210.1"
                     /translation="MILPARFSDGISLSLRLKLLTGVWVGLAALSVVLTLLLSLRLEN
                     AASVIEEAGNLRMQAYRLAYMAGEGSPRSQIDNQVDEFEKSLNRISQSDAIHPLIPSD
                     TPLAYDLIQSMLIIDWQAHILPPLQSYRRPTQVDLYRFAGNIELFLQALENANEKNTW
                     WLRRFQWAIMLMTLVSSVLMLFWHQIWVIRPLQALREGAERIGRRCFDIPVPEGGTPE
                     FKQVGRCFNQMGGRLKILYDDLEGQVAEQTRSLEKQNQNLTLLYQTTRDLHQSYIPQQ
                     AAEHFLNRILPAVGADSGRVCLDGGSDVYVSIHHADCGTAASDLGKYHEEIFPIEYQN
                     ETLGRLLLSFSDGISLTGDDRTLLQTLIRQLGVSLASAKQEEEKRLLAVLQERNLIAQ
                     GLHDSIAQALTFLNLQVQMLETAFAENKREEAAENISFIKTGVQECYEDVRELLLNFR
                     TKISNKEFPEAVADLFARFTQQTGITVETAWENGSFLPPQEAQLQMIFILQESLSNIR
                     KHARATHVKFTLSEHGGRFTMTIQDNGQGFDTEKIGEPTGSHVGLHIMQERAKRIHAV
                     LEIRSQAQQGTTVSLTVASEESLK"
     gene            9527..10141
                     /locus_tag="ACJJDE_001288"
     CDS             9527..10141
                     /locus_tag="ACJJDE_001288"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HGG7541211.1"
                     /translation="MKTSNFSKRTSAMKTFALILADGQASRMGGEDKGLALLGGKALI
                     DHVIDRVRPQVSHIAISTNRNLEEYARRSPHIFPDARQWQHFGPLSALCTAANDLQLA
                     TADWLLVVPCDMPYLPDDLVARFETVSKRTPLCNAYYVETPITMHYNIMYIRPQILQS
                     AIPYLFSGMKTLRSWLQQQRARSVRFEFDGHFADLNTQIDLQEG"
     gene            10304..10921
                     /locus_tag="ACJJDE_001289"
     CDS             10304..10921
                     /locus_tag="ACJJDE_001289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HGG7541212.1"
                     /translation="MFTGIVQGLGKLTAIHRPSEAFHTYVVELPQEAADNLQRGASVA
                     NNGCCLTITEIEGNRVSFDLMAETLAKTNLGLLKEGDCVNIERAARFGDEIGGHVMSG
                     HIMATVPIVEIERDGFNRTVWFSLPHELKPYILTKGFVGLDGCSLTIGKVEDGRFNVH
                     LIPETLERTLFGSRKVGDRINIEIDPNTQAIVDTVERLMAQRYAK"
     gene            10929..11792
                     /locus_tag="ACJJDE_001290"
     CDS             10929..11792
                     /locus_tag="ACJJDE_001290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HGG7541213.1"
                     /translation="MELNEFFDKAYAVLRRLDAVLPPEPGHTDWNALAFRWQSAGKKG
                     FLEHLPDPHTFPLVRLAGVGRQTELLVRNTEQFIVGRPANNVLMSGARGTGKSSLVKA
                     LLHEYADKGLRLIEVDKSDLIGLPYLLTLLKERPEKFIVFCDDLSFESGDETYKALKT
                     ALDGGLSQRCANVLVYATSNRRHLMPEYFDENAGTTGMRGEIHQKEAVEEKISLSDRF
                     GLWLSFYPFDQNDYLAAVQNWLEDFGVPYDETAQMAALQWAQTRGSRSGRSAWQFACD
                     WAGRLPKQRAL"
     gene            complement(11805..12239)
                     /locus_tag="ACJJDE_001291"
     CDS             complement(11805..12239)
                     /locus_tag="ACJJDE_001291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HGG7541214.1"
                     /translation="MPLPAPCRFAKPAASFLSMALLSCQLSHAATAYIPPNDFQPNCD
                     IRRLGLTQSQHNELRKIRTAFKMAGDRARLKVMHSEHSRRRSVVEIISSDVFNRNEAR
                     DYVESRYLSGMDFAVDELEIQHRFFHILTPQQQQMWLSSCLK"
BASE COUNT         3048 a         2932 c         3352 g         3065 t
ORIGIN      
        1 cgacgcatcg ggcttgggcg aaaaaattaa agacggcaaa aaaaccgtac tttcctgcga
       61 agaagaacaa aaaatctgca atactttcac gaacaaacag gcagtggaag atttcagtgt
      121 ggtaatcggc tacgatgaaa tcaaagcgaa gaatcacagc ttgtcggcgg ggcagtattt
      181 cgaggtaaag attgattatg tggatatttc cgccgacgaa tttgcgcaaa aaatggcggg
      241 attttcagcg gatttggata aacttttcgc cgaatctgcc gaattggaaa aagagattaa
      301 ggatagattg gcgatgttga aattcaattc ataaataccg atgaatgaaa ccggtcaaac
      361 ttaaaatgcc gtctgaaagc ctttcagacg gcattttgtt tggtttggaa aatacttatg
      421 ccgttctttc cctgaaagag agaatccaaa aaaccaaagc cacaggaatt tatcggaaat
      481 gacaaaaacc cgacgaaccg gattcccgcc tgcgcgggaa tgacgaatta gaagttaccc
      541 gaaatttgca aaaacaaaat ccaacccaac agaccgggtt ttcgtttgca cggaaataat
      601 gcaataaata aagcaaatat aaagtatttg aatttactat attatttttc cgcttcttca
      661 aagccgacga cttccaaacc gaagccggtc aggccggtga aagatgaggg ctgcccgagg
      721 acgcgcagtt ttttgacgtt gaggccggcg aggatttgcg caccgatgcc gtagcttttg
      781 ctgtcccatt tgtaggcttg gtttgcacct ttgggcaggg tgcggtcgag cagggcggcg
      841 ccgtcttcgg tgcggtgcag aaggatgact acgccgcttt cggcctgttg gatgcgctcg
      901 agtgctttgg gcagcgacca tgaatgacgc gggttagctt ggatgaagtc catgacgctg
      961 aagggttcgt ggacgcggac gagggtttcg gtgtcggcgg agggcgtgcc tttgacgagg
     1021 gcgaggtggg tttcgccgga gagtttgtcg acgtaaacgt gttgttggaa ctcgccccac
     1081 ggggtttgta caggcgcatt gcccatgtct tcaagcaggc tttcggtacg gctgcggtat
     1141 tcgatgaggt cggcaatcgt gccgattttg agcttgtgtt cttcggcgaa tttcatcagt
     1201 tcgggcatac gcgccatcgt gccgtcgtcg ttgatgattt cgcaaataac ggaggcagga
     1261 atcagcccgt tcatttgcgc caggtcgacg ccggcttcgg tgtgtccggc gcggacgagt
     1321 acgccgcctt tttgggcgcg aagcggaaag atatgaccgg gttggacgat gtcttcgggt
     1381 ttagcggtcg gggaaacggc ggtttgaata gtcagggcgc ggtcggcggc ggaaatgccg
     1441 gtggtaatgc cgtgtgcggc ttcgatggag acagtaaagt tggtgccgta ttgcgcgccg
     1501 tttttttggg tcatcatcgg cagcccgagt ttttcgacca tttcgccgtc catcggcagg
     1561 cagaccaagc cgcgcgcgtg tttgatcatg aagttgatgg cttcgggcgt gacgaattgc
     1621 gccgccatca gcaggtcgcc ttcgttttct cggtcttcgg catcggtgat gatgaccatt
     1681 ttgccggctt tgatgtcggc taggatttcg gggatggggg aaatatggga catggtgtgt
     1741 tttcctgtgt gttcgggcgg gcgggcggtg tgttcggtat cgagccagaa ggcgggcatt
     1801 tttgccgcct gttcgatttt acgggctttt ttctcgccga aggatttgtt tttcaaaagg
     1861 gcggagagtt cgcctgtgtt gagggcaacg gcttcggcaa aacgggtttg caaaccgccg
     1921 tagtgttctg ctatccattg ccgcaggttg cggcggcgca gaccggctgt gtcggtcatc
     1981 gtttcatcct ttgtagaaat cggatgtagc ggattgtaat cgcgtattta ccaaaaagca
     2041 aatctgtttt tttcgccaaa ccgaattatt tgctttttgg taaacagatg ccgtctgaag
     2101 ccggattcgt ggcttcagac ggcattgccg caatccttgc cggccggggg ctgtttgtcc
     2161 caacttcccg cgcacttctg atttggggtt tgccggaagc ttattccgaa aaaaatttct
     2221 gataaacggc cttgattgcc gggtacagca taggcggtac gagcaggcgc aatatcggca
     2281 atcctatgat gaatgcggtc ttcccgataa aaaccggacg gattgtcttc gcgccgaata
     2341 tctttctgca tttttcttta aatgaaaaat atttccggta gatgaggata atgtttttgg
     2401 aaaaataaag ccttaccaat atagacctca gatagccgat attgtcgaag acaaattttt
     2461 gcaaaccgcc gtagatgggg gaatttttgt tttcgactaa aaaatccaca ccccggtcga
     2521 gatgcgccag catatcgctg aaatttttgt atttgacgtt gtggctgata gagttgccga
     2581 gaacgcggta ttgataaaaa gggttatcgt aaaaggcaaa agtcttgaca aaacgcgcca
     2641 atttcaaact gtacgggaaa tcctcgtgaa tgtatccttt tgggaaaaac agattgtttt
     2701 tgatgattat ttcccgcctg acgatttttg tccacgcgtt ggcgatatag taccgcccct
     2761 ccaccaacgt ttcaaaatgg cggacaaaat cattatccga aaagtccgcc cctttgggga
     2821 tgacgtggta attgagggac gagggatgca ggatcaaatc aacctttttg tctgcaagtt
     2881 gttgtaaatc aaagagaatc cccccccccg cgttttttga acggttggta tcggcccaat
     2941 aatcgtcgct gtccaaaaag attaggtaat cgccttttgc cgcccggata ccggcgttgc
     3001 gggcatccga cagcccgccg ttttcttgat gaatcacttt tatatgcgga tatttgcctg
     3061 catattcgtc gcaaatcttc ccgcagccgt ccggcgaacc gtcatcgacc aaaatcattt
     3121 cataatcggc aaaattttcg gcaagcacgg aatccacgca gcagcggagg tatttttcca
     3181 cattgtaaat agggacgatg atggagaaaa tcataaatat caatccatta tattaagatg
     3241 tttgcgcgta tgcctcaaac ccgcgctcgc aatgcgtttg catccactat aaaacttatt
     3301 gctttatcaa ggtatggaaa cctgtttccc gaaaggcggc gcaggatgcc cgttccctgc
     3361 aactttgcct tattccgaca tcagatgtcc cagcttgtct gctttggttt ggaggtagcg
     3421 tttgttttca aggttttccc cgacgtgcag ggggatgcgt tcgaccacgt taatccccgc
     3481 atctttcagg gtttggattt tttcggggtt gttggtcagc agtttgaccg agcggatgcc
     3541 cagatattcg tagatagatt gcgccaaacg gaaatcgcgg gcatcgacgg gcagcccgag
     3601 tgccaaattg gcttcaaccg tatccatacc ttggtcttgc agatgatagg cgcggatttt
     3661 gttaatcagc ccgatgccgc gtccttcctg acgcagatag acgatgatgc cgcgcccctc
     3721 tgtctgtacg gccctcatgg ccgcttcaag ttgaggtccg cagtcgcatt ttctcgagaa
     3781 cagcgcatcg cccgtcaggc attcggagtg gatgcgcgtc agaaccggat tgccgtctga
     3841 aaaatcaccg acggtcagcg cgacgtgttc ctgcccattt gcctcttcaa agccgtgcat
     3901 cgtaaatacg ccccattcgg tcggcaggcg gcaggaagca acatagttta ataattcaga
     3961 cattttcatc tccttctgcg gcagtgatgc ccaaaagctg cttcaaaggt tcggacaaag
     4021 ccaaggcaag agccacccat tccacctgtg ctgccgtacc cgcacactct gcgcattcaa
     4081 attccacatg aaccacgccc aacacaccgc cactttccgt gcagaccgga atggaaattt
     4141 gcgccgccga agcatgattg cgttctcccg aaagctctcc caaatccaac caacggcgta
     4201 catccgaggc aacattcatc cagccgcttt gcgccgaacg gcaagccagc gaaaccttgc
     4261 ctgccgcttc atccaaatcc cacaggtttt ccaaaacctc gccctgccgg gacaggcaaa
     4321 ccagccgaaa ggcggcattt tcagacggca tcagggcata aacggctgcg gcgcgcacgc
     4381 ctttacagcg tgaaaacacc gaatccaaag ccatgaaaag ccgtttcaga ccttcctcat
     4441 tcccgctgtt ttgctccaaa taatcggcaa gcctccaatc ctcatgctca agccacaaaa
     4501 ccgaacgctc aatcgaagtc gtccccatat ccattaccgt ctgcgccgtc agatacgccg
     4561 tccgaacctc gtcaagcggc agcttcaaac cctgagtcag cagaaaatcc ttaatcaaag
     4621 cagcaggcat acccaaattc cgtcaataaa aacaaaaaac cgcccgattc cgatgtcagg
     4681 cggacgaaaa acagatttta ccgccccaaa ccccaagcca tcaacagccc cgccgaaaac
     4741 cttgcacaaa aaaacaaaat ctgtataatt gtccaattcc catgcggacg tggcgaaatt
     4801 ggtagacgca ccagatttag gttctggcgc cgagaggtgt gagagttcga gtctctccgt
     4861 ccgcaccaat aatgataaat aaatcatata gttaatgctt atcgggacaa attagtgcca
     4921 caaaacataa gtcgtctgct tttcagcggg cggctttttt atctgcctat atgtttcaac
     4981 acgcagaacg gtacataaag tgccgccatt tgttctaccc cgaatcagaa gcgggtgctt
     5041 ccgcccgcaa tcagattcac cgcccctaat gccggggttt caactggaaa gaagaaaata
     5101 ttgattttga tgatggcatc aaaaaacccc ttccgcccgt ctgccaaaag gaatggttaa
     5161 gaaaagcaat gcgtcttttg atggaacgcg atatataagg aattgagggg aagggcaggc
     5221 gggtttctgc ccgttaatcc tgcggacgat cccgccaaac ccgacacgcg cgggcatatg
     5281 gcggattgtt tacaatattg tctaaaaatc tgaacctgca aacgtgaaat aaggtagaat
     5341 acgccccgtt attttaccgt ccaatcccca tttaccaagg aaaaacgatg agtacttcat
     5401 tgagttaccg cgatgcaggt gtcgatatcg acgcaggcga ccaactggtc gaaaacatca
     5461 aaccgtttgc caaacgcacc atgcgtccag aagtattggg ggatttgggc ggttttggcg
     5521 cattggtcga aatcggcaag aaatataaaa atcccgtatt ggtcagcggt acggacggtg
     5581 tgggtaccaa gctcaagctt gcctttgatt gggataaaca cgatatggtg ggcatcgacc
     5641 ttgttgcaat gagtgtcaac gatattttgg ttcaaggagc agaacctctg tttttcttgg
     5701 attatttcgc ctgcggcaaa ttggatgttc cgcgcgcaac cgatgtcatc aaaggcattg
     5761 cacaaggttg cgaagaatcc ggctgcgccc tgattggcgg ggaaactgcc gaaatgccgg
     5821 gcatgtatcc cgtcggagaa tacgatttgg cgggttttgc cgtcggcgta gtggaaaaag
     5881 agaatgtcat taccggccgc agtatcggcg cgggcgatgt ggtattgggt ttggcttcca
     5941 acggcgcaca ttcaaacggc tattccctta tccgtaaaat catcgaacgc gacaatcccg
     6001 atttggatgc cgagtttgat aatggcaaaa ccttgcggga ggctgttatt gcgccgaccc
     6061 gtctgtatgt gaaaccgatt cttgccgctt tggaaaaatt taccattaaa ggtatggcac
     6121 acattaccgg cggcggcatt accgaaaacg tgccgcgcgt gttgcctgaa aacacggttg
     6181 cacaaatcga tgctaaatcg tgggaattgc ccaagctctt ccaatggctt caaaaggcgg
     6241 gcaatgtgga aacccaagaa atgtaccgaa cctttaactg cggcatcggc atggtcgtta
     6301 ttgttgctgc cgaagatgcc gatgcggttc agggtctctt gggtgaacaa ggtgaaacag
     6361 tttaccgttt aggtttgatc cgtgagcgtc agggagacga gcatcaaacc caggttgcct
     6421 gattgcttct atagcgaaat gccgtctcaa acatgggttt ggacggcatt tttatagagg
     6481 attaacaaaa atcaggacaa ggcgacgaag ccgcagacag tacagatagt acggcaaggc
     6541 gaggcaacgc cgtactggtt tttgttaatc cactatatat tgattgatat gagggtgggt
     6601 tacacatgct taaacgatat aagccattgt atatttatgg gattcggaat ggaacatttt
     6661 accctgcatt agtatttccg ctttttatta tgccgtctga aaatatcatg atgatgcgtt
     6721 ttcagacggc atagttgata ttgcagtatc agataggggc aaacggaaaa cactaaaccg
     6781 aacaatatta ctgctatgcc aagcgtactt atgggggcat aaacttacat gcttggtctg
     6841 ttatccgaat gaccgtacgg ggattaaaac ccctaatatg ccgtctgaac ccgccttatt
     6901 ccggcacagg ttgggggacg ttgtgccgga tggcgtaaac ggcggcctgc acccggctgc
     6961 tgaggttgag tttgcggagc aggttttgaa cgtggacttt gacggtggat tcggcaagat
     7021 cgaggtggcg ggcgatgatt ttgttgctgt gtcctgcggc gagatagccc aagatttcca
     7081 gttcgcgagg ggtaagtgag gagagtgcct gtgtcccttg ggcaggttgg ggggaaatca
     7141 ggcttttaac gagtttggcg gtcatctcgg gcgagaatac attatcgcct tcggcggctt
     7201 tgcgtatgct ttcgagcaga aagtcagcgt tgatgttttt cagcaggtaa ccgcgcgcgc
     7261 cgatgcgaat acattcggtc aagtcgtcgc tgtcttcgga aacggtcagc ataatcactg
     7321 cctgctgcgg attgatgctg atgatttggg agagtgcttc gcgtccgttc atgccgggca
     7381 tattcaaatc gagcaggacg acatcgggtt gcagccgact aatcattttg atgcccgaga
     7441 ggccgtctgc ggcttcgccg atgacttcaa aaccgtgttg gcgcgacaaa agggctttaa
     7501 tgccgctgcg gaagagggta tggtcgtcta tcagaataat tttaatagtc atttcaagct
     7561 ttcttcagat gcaaccgtca atgagacggt ggttccctgt tgagcttggg aacggatttc
     7621 taaaacggca tggatgcgtt tggcacgctc ctgcatgatg tgcagtccga catggctgcc
     7681 cgtgggttct cctattttct ccgtgtcgaa accttgtccg ttgtcttgga tggtcatggt
     7741 aaagcgtccg ccgtgttcgg aaagggtgaa ttttacatgg gtggcgcggg cgtgtttgcg
     7801 gatgttggac aggctttcct gcaggataaa aatcatttgg agctgcgctt cctgaggcgg
     7861 caggaacgaa ccgttttccc aggcggtttc gaccgttatc ccggtttgtt gcgtaaagcg
     7921 ggcgaatagg tcggcaacgg cttcgggaaa ttctttattg ctgattttgg tacggaagtt
     7981 gagcagcagt tcgcggacat cttcataaca ttcctgcacg cctgttttga tgaagctgat
     8041 gttttctgcg gcttcctccc gtttgttttc ggcaaaggcg gtttccagca tctgtacctg
     8101 taggtttagg aacgttaatg cttgtgcgat gctgtcatgt aatccttgcg caatcaggtt
     8161 gcgttcctgc aatactgcaa gcaggcgttt ttcttcttcc tgcttcgcgc tagcgagcga
     8221 tacgcccaat tgccgaatca gggtttgaag cagcgtgcgg tcgtctccgg tgagggaaat
     8281 gccgtctgaa aagctgagca acagcctgcc caatgtttcg ttctggtact caatggggaa
     8341 gatttcctca tggtacttcc ccaaatccga agctgctgtg ccgcaatccg catgatgaat
     8401 ggaaacataa acatcggatc cgccgtccaa acaaactctg ccggaatctg ctcctacggc
     8461 gggcaggata cggtttagaa aatgttctgc agcctgttgc ggtatgtagg attggtgcag
     8521 gtcccgtgta gtttggtaca gcagggtcag gttttgattt tgtttttcga gactgcgtgt
     8581 ctgctcggcg acttgtcctt ccaaatcatc atataaaatt ttcaacctgc cgcccatttg
     8641 attgaaacaa cgcccgacct gtttgaattc cggcgtaccg ccttcgggaa ccggaatatc
     8701 gaaacacctc cgtccgatgc gttccgcacc ttcccttaac gcctgcagcg gccggataac
     8761 ccaaatctgg tgccaaaaca gcatcagtac agacgacacc agcgtcatca acataattgc
     8821 ccattgaaaa cgcctgagcc accatgtgtt tttttcgttg gcattttcca atgcctgcaa
     8881 aaacagttcg atgtttccgg caaagcggta gagatcgacc tgagtcggtc gccggtagga
     8941 ctggagcggg gggaggatgt gtgcctgcca atctataatc agcatggatt gtatcaaatc
     9001 ataagcaaga ggggtgtccg aaggaatcag cggatggatg gcatcacttt gtgaaatacg
     9061 attcaggctt ttttcaaatt cgtcaacctg attgtctatt tgggagcggg gagatccttc
     9121 acccgccatg tatgccagac ggtatgcctg cattctcaag ttgcccgcct cttcgatgac
     9181 ggaggccgcg ttttccagac gcaaagagag cagcagtgtc aaaacgacag acaatgccgc
     9241 caacccgacc cacactccgg tcaggagttt caggcgtagg gaaaggctga tgccgtctga
     9301 aaaacgggct ggcagtatca tgctcggcga aaaattgttc taaataatgc aaacaatatc
     9361 attctttggg attagataca actgctcaga aagaattggt taaggaaaac ttaatccgca
     9421 ccgcttcagt gttaaatcat gttatgataa aattcagata atatgaattt atttgccatc
     9481 tgcttcagac ggcattttga gtcattggga acggcagact gcaatcatga aaacctcgaa
     9541 cttttccaag agaacatccg caatgaaaac ttttgccctg atactggccg acggtcaggc
     9601 gagccgtatg ggaggcgagg acaaggggct tgctcttttg gggggtaagg cactgataga
     9661 ccatgtcatc gacagggtca ggccgcaggt cagccatatc gccatcagca ccaaccggaa
     9721 tttggaagaa tatgctcgaa gaagtccgca tatttttccc gatgcgcggc agtggcagca
     9781 tttcggcccg ctttcggcat tgtgtaccgc agccaacgat ttgcagttgg cgactgctga
     9841 ctggcttttg gttgtgccgt gcgatatgcc gtatctgccg gacgatttgg tggcgaggtt
     9901 tgaaaccgtg tcgaaacgca caccgttgtg caatgcgtat tatgtggaaa cgccgataac
     9961 gatgcactac aacattatgt atatccgccc gcagattctg caaagcgcga ttccctatct
    10021 gttttcgggt atgaaaacat taagaagctg gttgcagcag caaagggcgc ggtcggtcag
    10081 attcgagttt gacgggcatt ttgccgactt gaacacgcaa atcgatttgc aggagggata
    10141 agggcaagac cgccgaccgg cgtggaaagg aaaggtcaag ccataccggg cggtttttgc
    10201 ccgaatcgga ggcataatgc tgtctgaagg catttcagac ggcatttttc gcggggagat
    10261 gctacaattt gcaccatttt taccgacaca gggaaacagg attatgttta caggcattgt
    10321 tcaaggattg ggaaaactga cggcaatcca ccgcccgtcg gaggcatttc acacttatgt
    10381 cgtcgagctt ccgcaagagg cggcggacaa tctgcaacgc ggcgcatcgg tcgccaataa
    10441 cggctgctgc ctgacgatta ccgaaatcga aggaaaccgc gtcagtttcg atttaatggc
    10501 ggaaactttg gcaaaaacca atttggggct gctgaaggaa ggcgattgcg tcaacatcga
    10561 acgggcggcg cgtttcggag acgaaatcgg cggacacgtc atgagcggac acattatggc
    10621 aaccgtgcct attgtcgaaa tcgaacggga cgggttcaac cgcacggttt ggttttcgct
    10681 cccgcatgaa ctcaaaccct atatcctgac caaagggttc gtcggcttgg acggttgcag
    10741 cctgaccata ggcaaagtcg aagacggccg tttcaatgtc catctgattc ccgaaacttt
    10801 ggaacggacg ctgttcggca gcagaaaggt cggcgacagg atcaacatcg aaatcgatcc
    10861 gaatacgcag gcaatcgtcg acaccgtcga acggctgatg gcgcaaagat atgcaaagtg
    10921 aggtagagat ggaattgaac gaatttttcg ataaagccta tgccgttttg cggcgtttgg
    10981 atgccgtgct tccgcccgaa cccgggcata cggattggaa cgcgcttgcc ttccgctggc
    11041 agagtgcggg caaaaaaggt tttttggaac acttgcccga tccgcacacc tttcccttgg
    11101 taaggctggc gggagtcggc aggcaaaccg aattgctggt gcgtaatacc gaacagttca
    11161 ttgtcggcag acccgcgaac aatgtattga tgagcggcgc gcgcggaaca ggcaaatcct
    11221 cgctggtcaa agccctgcta cacgaatatg cggataaggg attgcgcctg atcgaagtcg
    11281 ataaaagcga tttaatcggc ctgccttacc tgttgacgct tttgaaggaa cgtccggaaa
    11341 aatttatcgt attttgcgac gatttgtcgt ttgaaagcgg cgatgaaacc tataaggcat
    11401 tgaaaaccgc gttagacggc ggtctgtctc aacgttgcgc caacgttttg gtttacgcga
    11461 cttccaacag acggcacctg atgcccgaat attttgacga gaatgccggt acgacgggga
    11521 tgcgggggga aatccatcag aaagaagcgg tggaagaaaa aatatccctg tccgaccgat
    11581 tcggattgtg gctcagtttt tatccgttcg atcaaaacga ttatctggcg gcggtgcaaa
    11641 attggctgga agatttcggc gtgccgtatg atgaaaccgc acagatggcg gcattgcagt
    11701 gggcgcagac gcggggcagc cgttcgggac gttccgcgtg gcagtttgcc tgcgactggg
    11761 cgggcaggct gccgaaacaa cgggcgttgt gagcgtttcg gggattattt gaggcaggaa
    11821 gaaagccaca tttgctgctg ttgcggtgtg aggatatgga agaagcggtg ttggatttcc
    11881 aattcgtcca ccgcaaaatc cataccggac aaatagcggc tttcgacata atcgcgcgcc
    11941 tcgttccgat taaaaacatc cgaagaaatg atttcgacga cagaccggcg gcggctgtgt
    12001 tcggaatgca taaccttcaa acgcgccctg tcgcccgcca ttttgaaggc ggtgcggatt
    12061 ttacgcagct cattgtgctg actttgggtc agcccgagtc ggcgtatgtc gcagttcggt
    12121 tgaaaatcgt tcggggggat ataagccgtg gcggcgtggg aaagctgaca ggaaagcaaa
    12181 gccatactta aaaaagaggc ggcaggtttg gcaaaacggc agggagcagg cagtggcacg
    12241 gcttttcctc ttgttggaaa ttttaggaaa tatactagat tgacgtgtga aagatggtat
    12301 tatcgcggtt aacttttgtt aataatgcgt acgtatgtcc ggcaggcaga cataacggcg
    12361 gaatcggaac gtatagtgga ttaacaaaaa ccagtac
//
LOCUS       DBBZXU010000054        12314 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.054, whole genome shotgun sequence.
ACCESSION   DBBZXU010000054 DBBZXU010000000
VERSION     DBBZXU010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.054"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(12..848)
                     /locus_tag="ACJJDE_001292"
     CDS             complement(12..848)
                     /locus_tag="ACJJDE_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HGG7541215.1"
                     /translation="MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIA
                     EARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFDERDENLQNLLAQVRQGRLKRLE
                     AIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIRAGHVKNKQQAFTKYLGDGK
                     SCAVRHEWATLEDCVSAVNGAGGLAVIAHPMRYDLSATAKRNLFEEFKNLGGAGIEVH
                     SGNCCKNDRLNYALLAERFGLLASAGSDFHRLNDFSGGILGACPELPENCRPVWEHFS
                     RH"
     gene            complement(1156..1557)
                     /locus_tag="ACJJDE_001293"
     CDS             complement(1156..1557)
                     /locus_tag="ACJJDE_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541216.1"
                     /translation="MAIYDLNEIVTSAALGMYKGKWQNMDFEQVLQDIVQETDFTYSW
                     EYGENWAIFCLNEKSVGMLCKQIPFAIIENEKLSQKIYQEYPWILTQQVYHFDTDKIL
                     LNKYVCKLTIGIMSAISQEPISLQDLYVDTV"
     gene            complement(1662..1865)
                     /locus_tag="ACJJDE_001294"
     CDS             complement(1662..1865)
                     /locus_tag="ACJJDE_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase-like domain-containing protein"
                     /protein_id="HGG7541217.1"
                     /translation="MDTTLKNKAEAILGEPLLDEPIRPESWECCGSDCGEACIQTIYW
                     ADKARYDAQRRKLKEAGWSDDAV"
     gene            complement(1843..2076)
                     /locus_tag="ACJJDE_001295"
     CDS             complement(1843..2076)
                     /locus_tag="ACJJDE_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HGG7541218.1"
                     /translation="MEAIVYLEDNEYIALCDLLKLAGLAESGGQAKALIAEGLVSRNG
                     ETETRKTAKIRGGEVIEFDGARLEIADGYDPEE"
     gene            2614..6048
                     /gene="dnaE"
                     /locus_tag="ACJJDE_001296"
     CDS             2614..6048
                     /gene="dnaE"
                     /locus_tag="ACJJDE_001296"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HGG7541219.1"
                     /translation="MTEPTYIPLRLHTEFSITDGMVRIKKLVAKAQEYGLPALGISDL
                     MNEFGLVKFYKACRGAGIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLT
                     AAYVGKDRNIHHAELNPEWLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKY
                     AAWFPDAFYLELQRLPERPEWEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEA
                     RVCIAGGWVLTDKKRPRDFTPGQFFIPPETMLERFADLPEALENTVEIAKRCNLHITL
                     GKNFLPLFPTPDGLSRDDYLIKLSNKGLQERMVQLYPDEAERAAKMPEYQERLDFELN
                     IIIQMKFPGYFLIVQDFINWAKTHGCPVGPGRGSGAGSLVAYSLKITDLDPLKYALLF
                     ERFLNPERVSMPDFDVDFCQANRGRVIEYVRDKYGAQAVSQIVTFGTMSSKAVIRDVG
                     RVLELPFMLCDKLSKLIPLEANKPLGLDDAMKAEPQIQELIEAEEADELITLAKKLED
                     LTRGLGMHAGGVLIAPGKISDYSPVYQADESASPVSMYDKGDVEDVGLVKFDFLGLRN
                     LTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQIFRDANTTAVFQFESTGMKKMLKTA
                     HTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQYIHPLLEGILAPTYGIMVYQEQ
                     VMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIFAEGAAKQGISREKSDEIFNY
                     MEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATMSSELDNTDQLKHFYDDCR
                     ANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVESIIAARQSGGKFTGLL
                     DFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMDNADQKAANANQGGL
                     FDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQEVRQIAPQKLSK
                     LKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLENCADCLKADQ
                     VLIIESKVSRDDYGGGDGLRILANQVMTLQMARERYARSLSLALAPHHDIGKLVQLLA
                     AHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSVRVNW"
     gene            6091..6345
                     /locus_tag="ACJJDE_001297"
                     /pseudo
     CDS             6091..6345
                     /locus_tag="ACJJDE_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742773.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6482..7414)
                     /locus_tag="ACJJDE_001298"
     CDS             complement(6482..7414)
                     /locus_tag="ACJJDE_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7541220.1"
                     /translation="MLSQLEYGIAKENRPNRQADRFAGSVLPLAASLTHKPNIMKPIP
                     TDTFQPAILPQAFETEIKSTCTGRIYRIQTATLGEMPSEGYPVLFVLDGEAFFPALFN
                     IMQSLMPNPVTRSNAPCLIVGIGYTTGSVRDLAQRAADYTPPLGDNATADERQQFGQA
                     DRFSAFIDSELTAFLESRYTLNRNETAVFGHSFGALFGLYSLLSHRRFRRHWLVSPSI
                     WWHNRRILDFMPSENRLNGIDVCLNIGALERGSGCKRREERDMAGLSERMAAELDRHG
                     AAVFFREYPNADHGNVSFYSLTDCVEYLRKAWQR"
     gene            complement(7484..9640)
                     /locus_tag="ACJJDE_001299"
     CDS             complement(7484..9640)
                     /locus_tag="ACJJDE_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor"
                     /protein_id="HGG7541221.1"
                     /translation="MSVFRINMTAATVLAALSSSVFAAQTADLETVHIKGQRSYNAIA
                     TEKNGDYSSFAATVGTKIPASLREIPQSVSIITNQQVKDRNVDTFDQLARKTPGLRVL
                     SNDDGRSSVYARGYEYSEYNIDGLPAQMQSINGTLPNLFAFDRVEVMRGPSGLFDSSG
                     EMGGIVNLVCKRPAKAFQGHAAAGFGTHKQYKAEADVSGSLNSDGSVRGRVMAQTVGA
                     SPRPAEKNNRHETFYAAADWDINPDTVLGAGYLYQQRHLAPYNGLPADANNKLPSLPQ
                     HVFVGADWNKFKMHSHDVFADLKHYFGNGGYGKVGMRYSDRDADSNYAFAGSKLGMKT
                     PAGRPGCNTADDKACAVGLGTEIKQKALAFDASYSRPFRLGNTANEFVIGADYNRFRS
                     TNEQGRTTLYARGGLALNEFRSIPQVDLIANARKGVRGYSHTVATENLDEFGIYGKST
                     FHPADGLSLIGGGRLGHYKIESGEGKTLHKASKTKFTGYAGAVYDLNDNNSLYLSLSQ
                     LYTPQTNLDADGKLLKPRQGNQFEVGYKGSYMDDRLNARVSFYRMKDKNAAAPLNPNN
                     KKTRYAALGKRVMEGVETEISGAVTPKWQIHAGYSYLHSQIKTASNSRDDGIFLLMPK
                     HSANLWTTYQVTPELTIGGGVNAMSGITSSAGMHAGGYATFDAMAAYRFTPKLKLQIN
                     ADNIFNRHYYARVGGANTFNIPGSERSLTANLRYSF"
     gene            9800..10459
                     /locus_tag="ACJJDE_001300"
     CDS             9800..10459
                     /locus_tag="ACJJDE_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HGG7541222.1"
                     /translation="MTTPKLIIFDWDGTLADTTQPIIDTMRRSFAECGFPPPEAERVR
                     SLIGYSLPEIIRDLLEMPSETAIADITRTYSAHYLNPNNRNMTLFPDALPCLDKLKAQ
                     GYWLAVATGKGRAGLDNAISQTATGGYWLATACAGEYPSKPSPEMVFGICGELGFDPK
                     EALVVGDTAHDLHMAANAGAAAVGVATGAHSREQLLSAPHLAVLDGLSELPGFLAQHY
                     A"
     gene            complement(10546..11514)
                     /gene="ispH"
                     /locus_tag="ACJJDE_001301"
                     /gene_synonym="lytB"
     CDS             complement(10546..11514)
                     /gene="ispH"
                     /locus_tag="ACJJDE_001301"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051745 - 4-hydroxy-3-methylbut-2-enyl
                     diphosphate reductase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA];
                     GO_process: GO:0050992 - dimethylallyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HGG7541223.1"
                     /translation="MNEKTIILANPRGFCAGVDRAISIVERALEEFGAPIYVRHEVVH
                     NKFVVDNLREKGAVFIEDLAEVPPGATLVYSAHGVSKAVRQEAAERGFRVFDATCPLV
                     TKVHKEVARLDAQDCEIIMIGHKGHVEVEGTMGQLAPGKMLLVETVGDVAKLEVRNPD
                     KLAYVSQTTLSVDETKDIIAALNARFPNIRNPHKEDICYATTNRQTAVKELAEQCDIV
                     IVVGSPNSSNSNRLREVAAGIGTDAYMVDNAGYLQRAWFEGKNKVGVTAGASAPEVLV
                     QEVLATIRGWGHETVREGEGAEESIVFVLPKELRREGETKPDLCKR"
     gene            complement(11544..12038)
                     /gene="lspA"
                     /locus_tag="ACJJDE_001302"
     CDS             complement(11544..12038)
                     /gene="lspA"
                     /locus_tag="ACJJDE_001302"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HGG7541224.1"
                     /translation="MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPS
                     FFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFAALGKTGAAM
                     IIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKD
                     GKKT"
BASE COUNT         2792 a         3430 c         3257 g         2835 t
ORIGIN      
        1 tttatccgca ttcaatgccg ggaaaaatgt tcccacaccg gcctgcagtt ttccggcagc
       61 tcgggacacg cgccgaggat accgccgctg aaatcgttta agcggtggaa atcgctgccc
      121 gcgcttgcca acaatccgaa gcgttctgcc aaaagcgcgt agttgaggcg gtcgtttttg
      181 caacagttgc cgctgtggac ttcgatgcct gcgccgccga ggtttttaaa ttcttcaaac
      241 agattgcgct tggcggtggc ggacaaatcg tagcgcatcg gatgggcgat gaccgccagc
      301 ccgcccgcgc cgttgacggc ggagacgcag tcttccagcg tcgcccattc gtgtcggacg
      361 gcgcaggatt tgccgtcgcc caagtatttg gtgaacgcct gctgcttgtt tttgacatgt
      421 cccgcccgga tgaggaactc ggcgacgtgg gtgcggctga ccatttcttt gtttgccgcc
      481 agcgcgagcg cgccgtcgta tgcgccgccg atgcctttct tttcgagctt ggcggcgatg
      541 gcttcgaggc gtttcagacg gccttgccgc acttgcgcca acaggttttg caggttttcg
      601 tcccgttcgt cgaaatccaa accgacaacg tgtatggtgc gtccgcgcca agtgacggag
      661 atttccacgc cgttaatcag gcgcaaatcg agcctgtcgg cttcggcacg cgcttcggcg
      721 atgccgccgg tgtggtcgtg gtcggtcaac gccagcagcg tgcagccgtt ttgatgcgcg
      781 aggcggacga cttcggcggg ggaaagcata ccgtcggaaa cggtggaatg gcagtgcagg
      841 tctatcatgg ggtgttatat gtgtggtgaa tgaaggtcgg ggggcaatat tgtcgggcgg
      901 tgtggcggcg gcggtcattt taaaaaacag gtgtatggca aatgcaaagg aaaagccgct
      961 atgccgtcat tcccaacccc cgaatgtgcg gatagagcca gtggggatgg gtacattatt
     1021 tgtttgcatt agttagttat cctgctgtat ccattaaatc atatgcttca attaattgtt
     1081 gttctagctc ttgtaccaat tttggattgc gaattcctaa ctcaatttca aacagcgagt
     1141 tctcactatg tacatctaca cagtatctac ataaagatct tgtaaagata taggttcttg
     1201 gctgatggca ctcattattc caatagttaa tttgcataca tatttgttta ataaaatttt
     1261 atctgtatca aaatgataaa cttgttgagt tagtatccaa ggatattctt ggtatatttt
     1321 ctgtgataat ttttcattct ctataatcgc gaaaggtatc tgtttacata acataccaac
     1381 agacttttcg tttagacaga aaatagccca attttcccca tattcccaag agtatgtaaa
     1441 atctgtttcc tgaacaatat cttgtaaaac ttgctcaaaa tccatgtttt gccatttacc
     1501 tttatacata cctaatgcgg cactggttac tatttcgttt aagtcataaa tagccattta
     1561 tgttccttgc taatttccag gtgagacatg tataggactg agaccagtat gcccattagg
     1621 tttccctcta tacacattaa tagtagatgt tggttccgtt ttcagacggc atcgtccgac
     1681 caacccgctt cttttaattt ccgccgttgc gcgtcgtagc gggccttatc cgcccaataa
     1741 atcgtctgaa tgcacgcctc gccgcagtcg ctgccgcagc attcccacga ctcggggcgg
     1801 ataggttcgt ctaaaagcgg ttcgcccaag atggcttcgg ctttattctt cagggtcgta
     1861 tccatcggca atttccaagc gtgcgccgtc aaactcgatg acttcgccgc cgcgtatttt
     1921 ggcggtttta cgggtttcgg tttcgccgtt gcgcgacacc aacccttcgg caatcaacgc
     1981 cttcgcctgt ccgccgcttt cggcaagtcc ggccaatttc aacaggtcgc acaaggcgat
     2041 gtattcgttg tcttcgagat agacgatggc ttccatgatg tccccttgca gaaagagacc
     2101 gttattgtag cacctgccgc cgccgtaccc aaaattaccg caaaaccagc gatgtatccg
     2161 caccgcctgt tccgtaaaag taaaaatgcc gtctgaaacc ccgtatgccg caatccgttc
     2221 aaagaaatcc tgcccaacgg cagactgcaa atcctgttcc ccgacgaatc cgcattgacg
     2281 ctgatgcaca tcctcaaaca cgaactgccc gatacaccgg caatcggcat caaaacgaaa
     2341 tcaaaaacct gtttgaacgt aaaattaatt taactgcttg ccatccgtcc gaataaggta
     2401 tatagttctt tataactagt ttgatagttc tttatatcta tcaatactcc ttgggaagcc
     2461 tccaccacac ggtaggaggc atttttttgc cgtcgtaaaa gctcaaaaac atttgcaggt
     2521 catgccgtct gaatccgaaa cagcattacc tacaccgcca tctaaagaca accctgctac
     2581 aatacgcctt ttattgttca cgccgatttt gccatgaccg agccgaccta catccccttg
     2641 cgcctgcata ccgagttctc aattaccgac ggtatggtgc ggattaaaaa actggttgcc
     2701 aaagcgcagg aatacggttt gcctgctttg ggcatcagcg atttgatgaa cgaattcggc
     2761 ttggtgaaat tctataaagc ctgccgcggc gcagggatta aacccatcgg cgcggcggac
     2821 gtgtggatag gcaatccgaa tgcgcccgac aagccgtttc gcgccatgct gattatccgc
     2881 aacgatgcgg gctatctgcg cttgagcgag cttctgacgg cggcttatgt cggcaaagac
     2941 cgcaatatcc atcatgcgga actcaatccc gaatggctgg aaaacggcga caacagcggc
     3001 ttgatttgtt tgagcggcgc acattacggc gaagtgggcg tgaatctgtt gaacggcaat
     3061 gaagacgcgg cgcgtgcggc ggcgttgaaa tatgcggcat ggtttcccga tgcgttttat
     3121 ttagagctgc aacgcctgcc cgaacgcccc gaatgggagg cttgcgtttc cggcagcgtg
     3181 aagctggcgg aggaactggg tttgccggtg gtggcgaccc acccgacgca gtttatgagc
     3241 agcgatgatt tcaacgcgca cgaggcacgg gtgtgtattg cgggcggctg ggtgctgacg
     3301 gacaaaaaac gtccgcgcga tttcacaccg ggccagtttt tcattccgcc ggaaacgatg
     3361 ctggagcgtt tcgccgattt gcccgaggcc ttggaaaaca cggtagaaat tgccaaacgc
     3421 tgcaatctgc acatcacatt gggcaaaaac ttcctgcccc ttttccccac gcccgacggt
     3481 ttatcgcgcg atgactatct catcaaactc tcaaacaagg gcttgcagga acgcatggtt
     3541 cagctttatc ccgacgaggc ggagcgtgcg gcaaaaatgc cggaatatca ggaacgtttg
     3601 gattttgagc tgaacatcat catccagatg aaattccccg gctatttcct tatcgtacaa
     3661 gactttatca actgggcgaa aacgcacggc tgtccggtcg ggccgggacg cggttcgggc
     3721 gcgggttcgc tggtggcgta ttcgctgaaa attaccgacc tcgacccgct gaaatacgcg
     3781 ctgctgtttg aacgtttctt aaaccccgaa cgcgtctcca tgcccgactt cgacgttgac
     3841 ttctgtcagg caaaccgcgg ccgcgtgatc gaatatgtgc gcgataaata cggcgctcag
     3901 gcggtcagcc agattgttac cttcggcacg atgtcgtcca aagcggtcat ccgcgacgtg
     3961 gggcgcgtgt tggagctgcc gtttatgctg tgcgacaaac tgtccaagct gattccgttg
     4021 gaagccaaca aacctctggg tttggacgac gcgatgaagg cggagccgca gattcaggaa
     4081 ttaatcgaag cggaagaagc ggacgaactg attacgctgg cgaaaaagct ggaagacctg
     4141 acgcgcggtt tgggtatgca cgcaggcggc gtgttgattg cgccgggcaa gatttccgat
     4201 tacagccccg tgtatcaggc ggatgaatcc gcctctcccg tatccatgta cgacaagggc
     4261 gacgtggaag acgtgggttt ggtgaaattc gactttttag gtctgcgtaa cctgaccatt
     4321 atcgaaatgg cgcagaacaa catcaaaaac accaccggcg acatcatcga tgtcggcaaa
     4381 attccgctcg acgaccaagc cgcctaccaa atcttccgag atgcgaacac caccgccgtg
     4441 ttccagttcg agtcgaccgg catgaaaaaa atgctgaaaa cggcgcacac gaccaagttt
     4501 gaagaactga ttgccttcgt atcgctctac cgccccggcc cgatggacaa catccccgac
     4561 ttcgtcgcgc gcatgaaagg ccaggaattc caatacatcc atccgctgct cgaaggcatc
     4621 ctcgcgccga cctacgggat tatggtgtat caggaacaag tgatgcaggc ggcgcaaatt
     4681 atcggcggct actcgctcgg cggcgcggac ctgctgcgcc gcgcgatggg taagaaaaag
     4741 cccgaagaaa tggtgaaaca ccgcgaaatc tttgccgaag gcgcggcaaa acaaggcatt
     4801 tcgcgcgaaa aatccgacga aatcttcaac tacatggaaa aattcgccgg ctacggtttc
     4861 aacaaatccc acgccgccgc ctacgccctg atttcctacc agaccgcatg gcttaaagcc
     4921 cactatcccg ccgaatttat ggcggcgacc atgtcgtccg aattggacaa caccgaccag
     4981 ctcaagcatt tctacgacga ctgccgcgcc aacggcatcg agttcctgcc gcccgacatc
     5041 aacgaatccg actaccgctt cacgccgtat ccggacatga aaatccgcta cgcgctcggc
     5101 gcgattaaag gcacgggcga agccgccgtc gaatccatca tcgccgcgcg gcaaagcggc
     5161 ggcaagttta ccggcctctt ggacttctgc gagcgcgtcg gcaaagaaca catgaaccgc
     5221 cgcacccttg aagccctgat acgcggtggc gcgttcgaca gcatcgaacc caaccgcgcc
     5281 atgctcttgg cgaacatcga cctcgctatg gacaacgccg accaaaaagc cgccaacgcc
     5341 aatcagggcg ggcttttcga catgatggaa gacgccatcg aaccggtgcg gctcatcgac
     5401 gcgccgatgt ggagcgaatc ggaaaaactc gccgaagaaa aaaccgtcat cggcttttac
     5461 ctgtccggcc acccgttcgg cccgtatgcc caagaagtcc gccaaatcgc cccgcagaaa
     5521 ctgtcgaaac tcaaaccgca agacagcgtg cgcctcgccg gattcgttac cgccgtacgc
     5581 accatgatgg gcaagcgcgg caaaatcgcc ttcgtcagcc ttgaagattt gagcggacag
     5641 gttgaaatca tggtcggcgg tcagacgttg gaaaactgcg ccgactgcct caaagccgac
     5701 caagtgctga ttatcgaatc caaagtcagc cgcgacgact acggcggcgg cgacgggctg
     5761 cgtattctgg caaaccaagt catgaccctg caaatggcgc gcgaacgcta cgcccgaagc
     5821 ctcagcctcg ccctcgcccc gcatcacgac atcggcaaac tggtacaact gctcgccgcc
     5881 caccaactgc ccgacacgcc gcgcatcccg ctgcaactgt cgtatgccaa cgaaaaagcg
     5941 tcgggcaggc ttcaagtgcc gccgaaatgg acggttacgc cgagttccgc attgttcggc
     6001 gaactggaaa cattgctcgg cagccggtcg gtgcgcgtca actggtaacc caaaatataa
     6061 atgccgtctg aagcccaaaa accggtttca ttcgtacttt attcgaatga ttgaataaaa
     6121 gtaactgcca agaaaaacgt attttttggt tatttcgcca gtctaaatag agcaaccggg
     6181 acgattgata tccgtgtgca tgacacagac agcaccaaag ggaaaaacgg cattttccaa
     6241 agtatcggta tcaaaaccgc cctttcactc caaaaatacc aaatcgacaa accgggcaaa
     6301 gaaatcagac cgtgccgcct gaaaaaacgc ccacccgtcc gttaaattaa cctatccctg
     6361 tttcagacgg cctgaagcag ggatttttat atcaaaataa aatgagaaag ggagcaataa
     6421 cccttaggta gctcttgtta ttttccgatg caaaacaaag cagtcatata tttaattccc
     6481 cctacctctg ccaagccttc ctcaaatatt cgacgcaatc ggtcagcgag tagaacgaga
     6541 cattgccgtg gtcggcattc ggatattccc ggaaaaagac ggcggccccg tgcctgtcca
     6601 actctgccgc catgcgttcg gacagtcctg ccatatcgcg ttcttccctg cgtttgcaac
     6661 cgctaccccg ttcgagcgcg ccgatgttga ggcagacatc gatgccgttt agccggtttt
     6721 cagacggcat aaaatcgagt atccgcctgt tgtgccacca aatcgatggg gatacgagcc
     6781 aatgccgtct gaaacggcgg tgggaaagca gggaatacag tccgaacagt gcgccgaacg
     6841 agtgtccgaa tacggcggtt tcattgcggt tgagggtgta gcggctttct aaaaaggcgg
     6901 tcagctcgct gtcgataaag gcggagaagc ggtctgcctg tccgaactgc tgccgttcgt
     6961 ctgctgtggc gttgtctcca agcggcggcg tgtagtcggc ggcacgttgt gccaaatcgc
     7021 gcacactgcc tgtcgtgtag ccgataccga caatcaggca gggggcgttg cttcgggtaa
     7081 cggggttggg catcagcgac tgcatgatgt tgaaaagtgc ggggaaaaag gcttcgccgt
     7141 ccaaaacgaa gaggacggga tagccttcag acggcatttc gccgagtgtc gccgtctgaa
     7201 tccgatagat tcgccccgtg caggtggatt tgatttcggt ttcaaaggct tggggcagta
     7261 tggcaggttg gaatgtgtcg gtcggtatgg gtttcatgat gttcggcttg tgggtcagac
     7321 tggcggcaag cggtaaaacc gaaccggcaa agcggtctgc ctgccggttc ggtctgtttt
     7381 ccttcgcaat gccatactcc agttgtgaga gcatagggta tgcagcgcag cttgttgtgg
     7441 tttgatgatg ctgcggctgc cgtttcagac ggcatattgg tctttaaaaa ctgtaacgca
     7501 ggtttgccgt caggctgcgc tccgaaccgg gaatgttaaa ggtgttcgcg ccgccgacgc
     7561 gggcgtagta atggcggttg aagatgttgt cggcgttgat ttgcagcttc agcttgggcg
     7621 tgaagcggta tgccgccatc gcatcgaacg tggcataacc gcctgcatgc atccctgcag
     7681 atgaagtaat gccgctcatc gcgttcactc cgccgccgat ggtcagctcg ggcgtaactt
     7741 ggtaagtcgt ccacaggttt gcgctgtgtt tgggcatcaa taggaagatg ccgtcgtcgc
     7801 gtgaattgga ggcggttttg atttggctgt gcagatagct gtaacctgca tggatttgcc
     7861 atttcggtgt aaccgcgccg ctgatttcgg tctcaacgcc ttccatcacg cgtttgccca
     7921 atgcggcgta acgggttttt ttgttgttcg ggttcaacgg tgcggcggcg tttttgtctt
     7981 tcatgcggta gaacgaaact cgggcattga ggcggtcgtc catgtagctg cctttgtaac
     8041 cgacttcaaa ctggttgcct tggcgcggtt tgagcagctt gccgtcggca tcgaggttgg
     8101 tttgcggtgt gtagagctgg gacaggctca ggtagaggct gttgttgtcg ttcaagtcgt
     8161 aaaccgcgcc tgcgtagccg gtgaacttgg ttttgctggc tttgtgcagg gttttgcctt
     8221 cgcccgactc gattttatag tgtcccaaac gtccgccgcc gataagcgac agcccgtcgg
     8281 caggatggaa ggtggatttg ccgtaaatgc cgaattcgtc gaggttttcg gtagcgacgg
     8341 tatggctgta accgcgcacg cctttgcgcg cgttggcaat caaatcaacc tgcggtatgc
     8401 tgcggaactc gtttaaagcc aggccgccgc gtgcatataa agtagtacgg ccttgttcgt
     8461 tggtgctgcg gaagcggttg taatcggcgc cgatgacaaa ttcgttggcc gtattgccca
     8521 agcggaaagg cctgctgtag ctggcgtcaa acgcgagggc tttttgtttg atttctgtac
     8581 ccaaacccac cgcgcaggct ttgtcgtcag ccgtattgca gcccgggcgg cctgccgggg
     8641 ttttcatgcc cagcttgctg ccggcaaagg catagttgga gtcggcatcg cggtcggaat
     8701 agcgcatacc gactttgccg tagccgccgt tgccgaagta atgtttcaaa tcggcgaaca
     8761 cgtcgtggct gtgcatttta aatttgttcc aatccgcgcc gacaaatacg tgttgcggca
     8821 gggacggtaa tttgttattg gcatcggctg gcaagccgtt gtacggcgcg aggtggcgtt
     8881 gctggtaaag atagcccgcg cccaaaaccg tatcggggtt gatgtcccaa tccgccgccg
     8941 cgtagaaggt ttcgtgccgg ttgtttttct cggcgggacg cggagacgcg ccgacggtct
     9001 gcgccatcac gcggccgcgc acgctgccgt ctgaattgag gctgcccgat acgtccgcct
     9061 cggctttata ttgtttgtgc gtaccgaacc ctgccgcagc atgaccttgg aacgctttgg
     9121 ccgggcgttt gcacaccaga tttacgatgc cgcccatctc gccgctgctg tcgaacaagc
     9181 cgctcggccc gcgcatcact tccacacggt cgaaggcaaa cagattgggc agcgtgccgt
     9241 tgatactctg catctgcgcg ggcaggccgt cgatgttgta ttcgctgtat tcgtaaccgc
     9301 gcgcgtaaac cgaagagcgt ccgtcgtcgt tgctcaacac gcgcaggccg ggcgttttgc
     9361 gtgccaactg gtcaaacgta tcaacattgc ggtctttgac ctgttgattg gtgatgatgc
     9421 tgacagattg cggaatttcg cgcaaagaag cggggatttt tgtgccgacg gtggcggcaa
     9481 acgagctgta atcgccgttt ttctcggtgg caatcgcgtt gtacgaacgc tgacccttaa
     9541 tatggacggt ttccaaatcc gccgtttgtg cggcaaaaac cgaagacgaa agtgctgcca
     9601 aaaccgtggc ggcggtcata ttgatgcgga aaactgacat aaactgtccc attcacataa
     9661 atgataatgg ttctatttta ataaagcaca acgcggcttg ttcggaaaaa catatcgcgc
     9721 agccgacaaa ttttgtcgaa aatgcgacac gtctgcgttt tccgcataaa atctgacttt
     9781 tcaccgtaaa caacctgcca tgaccacgcc caaactcatc atcttcgact gggacggcac
     9841 gcttgccgat acgacccaac ccatcatcga caccatgcgc cgcagcttcg ccgaatgcgg
     9901 ttttccgccg cccgaagcgg aacgcgtccg cagcctgatt ggctacagcc tgcccgaaat
     9961 catccgcgac ctgctcgaaa tgccgtctga aaccgccatt gccgacatca cacgcactta
    10021 ttccgcacat tacctcaatc ccaacaaccg caatatgacg ctctttcccg atgccctgcc
    10081 ctgtctggac aagctcaaag cacaaggata ctggcttgcc gtcgccacgg gcaaagggcg
    10141 ggcgggtttg gacaacgcca tcagccaaac cgccaccggc ggctattggc tcgccaccgc
    10201 ctgcgcgggg gaatatccct ccaaaccctc gcccgaaatg gtattcggaa tctgcggcga
    10261 actggggttc gacccgaaag aggcattggt cgtcggcgat acggcgcatg acctgcatat
    10321 ggcggcaaac gcaggcgcgg cggcagtcgg cgttgccacc ggcgcacatt cgcgcgaaca
    10381 gctccttagc gcaccgcatc tcgccgtatt ggacggtttg tccgaactgc ccggttttct
    10441 tgcacagcat tacgcctgat tggtttccgc atccggcact cgaaacaaat gccgtctgaa
    10501 ggttgttcag acggcatttg ttttgcccaa acattcaacg cttgctcaac gtttgcacaa
    10561 atcgggtttg gtttcgccct cgcggcgcaa ctctttgggc aggacgaaca cgatgctttc
    10621 ttccgcgccc tccccttcgc gtacggtttc atgcccccac ccgcgtatgg ttgccaatac
    10681 ttcctgcacc aacacttcgg gcgcggacgc gcctgccgtt acgccgactt tgttcttgcc
    10741 ctcaaaccac gcgcgttgca ggtagcctgc attgtccacc atatacgcat cggttccgat
    10801 gcctgccgcc acttcgcgca ggcggttgct gttggacgaa ttgggcgaac cgaccacaat
    10861 cacgatgtcg cactgttctg ccaactcttt gacggcggtt tgccggttgg tcgtcgcata
    10921 gcagatatct tccttgtgcg gattgcggat attggggaaa cgcgcgttca gcgcggcgat
    10981 gatgtctttg gtttcatcga ccgagagcgt ggtttggctg acataggcga gtttgtcggg
    11041 gtttctgact tcgagttttg ccacatctcc gaccgtttcg accaaaagca ttttgcccgg
    11101 cgcaagctgc cccatcgttc cttcaacctc gacgtgcccc ttatgcccga tcatgatgat
    11161 ttcacagtct tgggcatcca gtcgggcgac ttccttatgc actttcgtca ccagcgggca
    11221 agtcgcatca aacacgcgga aaccgcgctc cgccgcttct tgccgcaccg ccttcgatac
    11281 gccgtgtgcc gaataaacca gtgtcgcgcc cggcggcact tccgccaagt cttcaataaa
    11341 caccgcacct ttttcacgca ggttgtccac gacgaatttg ttgtgaacga cttcgtggcg
    11401 cacataaatc ggcgcgccga attcttccaa agcacgttcg acaatactga ttgcccgatc
    11461 cacgccggcg cagaagccgc gcggattggc aaggatgatg gttttctcgt tcataagttt
    11521 tgcattccgt gttcagacgg cattcacgtt tttttgccat ctttgcgatg gacgatattg
    11581 tcaagcactg ccaataccgc gccgacgcag ataaaactgt cggcaatatt aaaggcggga
    11641 taaaaccaat tttgccaata aaacaataag aaatcgacga catgaccgtg tatcaggcga
    11701 tcgatgacat tgcctaacgc accgccgata atcatcgccg cacccgtttt gccgagggct
    11761 gcaaactcat cgcgcaagat ggcgcgtacc aaatacgcgc tcaccgccac cgccagcacc
    11821 aaaaaaaagt atttttgcca gccgccctga tcggcaagga agctgaacgc cgcacccggg
    11881 ttgtacacca gcgtcagatc gaaaaaggaa ggaatgacat tgacgcgttc ccgatactga
    11941 aacgacgaca gcaccgccca cttcgaccac tggtccagca cgatggcggc aagtgccaat
    12001 acccaatagc gcgttttact tgaaacagat gaagacatat ttttcaacag ccggtaaaag
    12061 agtaccattt tacccgaaaa ccccctttcc tgtacccgaa acggcaaatg ccgtaatctt
    12121 aaaacccgtc attcccgaca acaccgtaat ctcgaaaccc gtcattcccg cgtaggcggg
    12181 aatccagacc tgtccgcaca gaaacttatc ggataaaaac agttgctcaa acccctcgtt
    12241 ctagattccc actttcgtgg gaatgacggt tcagttgcgt tccaacaaca ccgcaatctc
    12301 gaaatccgtc attc
//
LOCUS       DBBZXU010000055        12240 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.055, whole genome shotgun sequence.
ACCESSION   DBBZXU010000055 DBBZXU010000000
VERSION     DBBZXU010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12240
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.055"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            244..981
                     /locus_tag="ACJJDE_001303"
     CDS             244..981
                     /locus_tag="ACJJDE_001303"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HGG7541225.1"
                     /translation="MIILDKVSKHYQTRDKTRFAAVEPTSLEIRDGEIFGLMGYSGAG
                     KSTLLRLINLLERPDTGKVNVCGQELTALDAAALRQARQNIGMVFQQFNLLNNRTVAG
                     NVAFPLEIAGWPSEKIKARVAECLEIVGLTERAGHYPAQLSGGQKQRVGIARALAPKP
                     QVILADEPTSALDPATTRSVLECLEDINKRFNVTIVIVTHEMSVIRRLCDRAALLDKG
                     KVVEIVEVRGNQIHARSDIGCELIRED"
     gene            984..1670
                     /locus_tag="ACJJDE_001304"
     CDS             984..1670
                     /locus_tag="ACJJDE_001304"
                     /EC_number="7.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033232 - ABC-type D-methionine
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0048473 - D-methionine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease"
                     /protein_id="HGG7541226.1"
                     /translation="MAGLTFEQTVSNIIGMKGEIVRALGETFVMVGLSTTFAVVFGTL
                     LGVLLFVTSSRQLHYNKPVNFLLDNLVNLMRAFPFVILMIAMIPATRAIVGSTIGPVA
                     ASLVLSVSGLFYFARLVEQNLREVPKGVIEAAAAMGAPPVAIVRKVLLNEARAGMVSS
                     ITVLAIGLLSYSAAAGMIGGGGLGDLAIRYGYYRYQTEVIVFIVALLVLLVILIQSTG
                     NALARKLDKR"
     gene            1829..2692
                     /locus_tag="ACJJDE_001305"
     CDS             1829..2692
                     /locus_tag="ACJJDE_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HGG7541227.1"
                     /translation="MKTFFKTLSAAALALILAACGGQKDSAPAASASAAADNGAEKKE
                     IVFGTTVGDFGDMVKEHIQPELEKKGYTVKLVEFTDYVRPNLALAEGELDINVFQHKP
                     YLDDFKKEHNLDITEVFQVPTAPLGLYPGKLKSLEEVKDGSTVSAPNDPSNFARVLVM
                     LDELGWIKLKDGINPLTASKADIAENLKNIKIVELEAAQLPRSRADVDFAVVNGNYAI
                     SSGMKLTEALFQEPSFAYVNWSAVKTADKDSQWLKDVTEAYNSDAFKAYAHKRFEGYK
                     SPAAWNEGAAK"
     gene            complement(2754..3323)
                     /locus_tag="ACJJDE_001306"
     CDS             complement(2754..3323)
                     /locus_tag="ACJJDE_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HGG7541228.1"
                     /translation="MVRRLIIGISGASGFQYGVKALELLRAQDIETHLVVSKGAEMAR
                     ASETAYARDEVYALADFVHPIGNIGACIASGTFKTDGMLVAPCSMRTLASVAHGFGDN
                     LLTRAADVVLKERRRLVLMVRETPLNLAHLDNMKRVTEMGGVVFPPVPAMYRKPQTAD
                     DIVAHSVAHALSLFGIDTPDSAEWQGMAD"
     gene            3481..4341
                     /locus_tag="ACJJDE_001307"
     CDS             3481..4341
                     /locus_tag="ACJJDE_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HGG7541229.1"
                     /translation="MAKVKGGLGRGLDSLLANGADNSSGDRLTTVAVKDIRPGRYQAR
                     VQIDDEALQELADSIKAQGVIQPVIVREHGLSRYELIAGERRWRAAQIAGLTEIPAVI
                     KTISDETALAMGLIENLQRENLNPIEEAQGLKRLADEFGLTHETIAQAVGKSRSAISN
                     SLRLLSLPEPVQEMLYQRRLEMGHARALLTLPVVEQLELAQKAVKNGWSVREVERRSQ
                     AALQNKRPEPKKTAAADIGRLNDLLTEKLGVNAEIKTANHKKGRIILHFDTPETFDHI
                     LKQLGIDYRP"
     gene            4477..4815
                     /locus_tag="ACJJDE_001308"
     CDS             4477..4815
                     /locus_tag="ACJJDE_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541230.1"
                     /translation="MNTRIIVSAAFVALALAGCGSINNVTVSDQKLQERAAFALGVSP
                     NAVKISNRSNEGIRINFTATVGKRVSQCYVTSVISTIGVTTSDAICLGGGTHKGKSQC
                     NALLKAAGRC"
     gene            5183..5536
                     /locus_tag="ACJJDE_001309"
     CDS             5183..5536
                     /locus_tag="ACJJDE_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HGG7541231.1"
                     /translation="MKQIIILQSAVLSICAAVAFAVWGFAGFLSAVGGGLSYLLPTFV
                     AVLLLKLFRGNPFLQSRMFVFGEILKVVLSLLSMLAVFAVWHQSLVFAPFLMGLLGVS
                     HLVFLVLLRVKDYGR"
     gene            5526..6392
                     /gene="atpB"
                     /locus_tag="ACJJDE_001310"
     CDS             5526..6392
                     /gene="atpB"
                     /locus_tag="ACJJDE_001310"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HGG7541232.1"
                     /translation="MAGETITAADYIKHHLQSLTSLSDVTQGQGLKNIADFSFINLDA
                     VFFAVLLGVIGSFLLWRGAKKATAGVPGRFQAAVEILFEFVDDMCKSIIHNEKSRKAV
                     APLGLTLFVWIFLMNAMDMLPVDLLPMVWQGITGNHHALLRVVPTADLNTTLALAVGV
                     LLICIYYNIKIKGLGGWFHELFSAPFGAKLAPANFLLNLVEFLSKTVSHGMRLFGNMY
                     AGELVFLLIALLGGAWAASGSVEVMDPILFVFHIIAGLAWAIFHILVITLQAFIFMAL
                     AFVYIGQAHDAH"
     gene            6449..6685
                     /gene="atpE"
                     /locus_tag="ACJJDE_001311"
     CDS             6449..6685
                     /gene="atpE"
                     /locus_tag="ACJJDE_001311"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HGG7541233.1"
                     /translation="MGLIAIACGLIVALGALGASIGIAMVGSKYLESSARQPELIGPL
                     QTKLFLIAGLIDAAFLIGVAIALLFAFVNPFAGA"
     gene            6756..7226
                     /locus_tag="ACJJDE_001312"
     CDS             6756..7226
                     /locus_tag="ACJJDE_001312"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HGG7541234.1"
                     /translation="MNINATLFAQIIVFFGLVWFTMKFVWPPIAKALDERAAKVAEGL
                     AAAERGKSDFEQAEKKVAELLAEGRNQVSEMVANAEKRAAKIVEEAKEQASSEAARIA
                     AQAKADVEQELFRARESLREQVAVLAVKGAESILRSEVDASKHAKLLDTLKQEL"
     gene            7231..7764
                     /locus_tag="ACJJDE_001313"
     CDS             7231..7764
                     /locus_tag="ACJJDE_001313"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HGG7541235.1"
                     /translation="MAEFATIARPYAKALFGLAQEKNQIESWLGGLEKLAAVVQEGKV
                     ASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLS
                     FNHIKSAIIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
                     DLSVQGKLSALYTTMTN"
     gene            7775..9322
                     /gene="atpA"
                     /locus_tag="ACJJDE_001314"
     CDS             7775..9322
                     /gene="atpA"
                     /locus_tag="ACJJDE_001314"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HGG7541236.1"
                     /translation="MQLNPAEISDLIKAKIENLSVNAEVRTRGTVISVTDGIVRIHGL
                     SDAMQGEMLEFPGNTFGLAMNLERDSVGAVVLGEYEHIKEGDTVTCTGRILEVPVGRE
                     LVGRVVDALGRPIDGKGPINTTLTAPIEKIAPGVIARKSVDQPMQTGLKAIDSMVPVG
                     RGQRELIIGDRQTGKTAVALDAIVNQKGTGVICIYVAIGQKASSIANVVRKLEEHGAM
                     EHTIVVAATASEAAALQYIAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLL
                     LRRPPGREAYPGDVFYLHSRLLERAARVNEHEVEKLTNGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETDLFNAGIRPAINAGISVSRVGGAAQTKVIKKLGGG
                     IRLALAQYRELAAFSQFASDLDEATRKQLEHGEVVTELMKQKQFSTLNTAEMALTLWA
                     INNGSYSDVPVAKALAFESEFLSFVRTQHPEVLEAVNASGAMSDESEKTLEAAMKSFK
                     SSYAYQA"
     gene            9347..10222
                     /gene="atpG"
                     /locus_tag="ACJJDE_001315"
     CDS             9347..10222
                     /gene="atpG"
                     /locus_tag="ACJJDE_001315"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HGG7541237.1"
                     /translation="MAVGKEILTKIRSVQNTQKITKAMQMVSTSKMRKTQERMRLARP
                     YAEKVRMVMSHLAQTNTDHGIPLLESHREIRRVGFILITSDKGLCGGLNANVLKKFLA
                     QVQEYRNQGIEEEIVCLGSKGLMACQSIGLNVVASAVNLGDTPKMEMLLGPLTELFQR
                     YEKHEIDRIHLVYSGFVNTMRQEPRMEVLLPIGENVIGDSAPKSPFSWEYRYEPTALA
                     VLEYLVRRYLESVVYQALSDNMASEQAARMVAMKAATDNAGNAIKELRLVYNKSRQAA
                     ITTELSEIVAGAAAV"
     gene            10260..11657
                     /gene="atpD"
                     /locus_tag="ACJJDE_001316"
     CDS             10260..11657
                     /gene="atpD"
                     /locus_tag="ACJJDE_001316"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HGG7541238.1"
                     /translation="MSQGKIVQIIGAVVDVEFPRDMIPRVYDALKLDENGLTLEVQQL
                     LGDGVVRAIAMGSSDGLKRGMTVSNTGAPITVPVGKGTLGRIVDVLGTPVDEAGPIDT
                     DKSRAIHQAAPKFDELSSTTELLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
                     LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRV
                     ALTGLTMAEYFRDEKDENGKGRDVLFFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTL
                     AEEMGRLQERITSTQTGSITSIQAVYVPADDLTDPSPATTFAHLDATVVLSRDIASLG
                     IYPAVDPLDSTSRQLDPMVLGQEHYDVARGVQSTLQKYKELRDIIAILGMDELSDEDK
                     LTVMRARKIQRFLSQPFHVAEVFTGSPGKYVALRDTIAGFKAILNGEYDHLPEQAFYM
                     VGSIEEAVEKAKTLN"
     gene            11668..12090
                     /locus_tag="ACJJDE_001317"
     CDS             11668..12090
                     /locus_tag="ACJJDE_001317"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HGG7541239.1"
                     /translation="MSIMQVEVVSSEQNIYSGEASFVVVPTVQGELGIYPRHEPIMSL
                     VRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTILADVAVRSAEMDQARAEEAKKAA
                     EAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK"
BASE COUNT         2999 a         3139 c         3161 g         2941 t
ORIGIN      
        1 ttcaattatt tgccgttttg gtgcgaaccg ctgcctttgc ccgtttcaga cggcattgtc
       61 cgaaatggtt gcctgcttcc tgccttattg acaaaaaaat gctttcccga taatatccta
      121 cgaaaattaa cctgccgatt tgacacagct tgcgggcata acagctaaag cgttccgaca
      181 attccagctt tatcttccgc gcccgttgtg tccgacatcg ggctttgttg tatgggaaag
      241 acaatgatta ttttggacaa ggtttccaag cattaccaaa cgcgcgacaa gacccgtttt
      301 gccgccgtcg agccgaccag cctcgaaatc cgcgacggcg aaatcttcgg gctgatgggc
      361 tattccggcg cgggcaaatc caccctgttg cggctgatta acctgttgga acgccccgac
      421 acgggcaagg tcaacgtctg cggacaagag ctgaccgcgc tcgatgccgc cgcattgcgt
      481 caggctcggc agaatatcgg catggtgttt cagcagttca acctgttgaa caaccgcacc
      541 gtcgccggca acgtcgcctt cccattggaa atcgccggat ggccgtctga aaaaatcaaa
      601 gcgcgcgttg ccgaatgtct cgaaatcgtc ggactgaccg aacgcgccgg ccactatccc
      661 gcccagcttt caggcgggca gaaacagcgt gtcggcatcg cccgcgcact cgcgcccaaa
      721 ccccaagtca tcctcgccga cgaacccact tccgccctcg accccgccac cacgcgcagc
      781 gtcttggaat gtttggaaga catcaacaaa cgattcaacg taaccatcgt catcgtaacc
      841 cacgaaatga gcgttatcag acgactgtgc gaccgcgccg ccctgttgga taaaggcaaa
      901 gtcgtcgaaa tcgtcgaagt acgcggcaac caaatccacg cccgatccga catcgggtgc
      961 gaactgattc gggaggactg aatatggcag gcttaacatt tgaacaaacc gtttccaaca
     1021 tcatcggtat gaaaggcgaa atcgtccgcg cattgggcga aaccttcgta atggtcggtt
     1081 tgtccaccac attcgccgtc gttttcggca cgttgctggg cgtgttgctc ttcgtaactt
     1141 ccagccgcca actgcattac aacaagccgg tgaacttcct gctcgacaac ctcgtcaacc
     1201 tcatgcgcgc cttccccttc gtcattttga tgattgcgat gatacccgcc acacgcgcca
     1261 tcgtcggcag caccatcggc ccggttgccg cctcgctggt gttgagcgtg tcgggattgt
     1321 tttattttgc ccgactggtg gaacaaaacc tgcgcgaagt ccccaaaggc gtaattgaag
     1381 ccgccgccgc gatgggtgcg ccgccggttg ccatcgtccg caaagtcctc ttaaacgaag
     1441 cgcgcgcggg catggtttcc agcattaccg tgcttgccat cgggcttttg tcatacagcg
     1501 cggcggcagg gatgataggc ggcggcggct tgggcgacct cgccatccgc tacggctact
     1561 accgctacca aaccgaagtc atcgtcttca tcgtcgccct cctcgtgctg ctggtcatcc
     1621 tgattcaaag caccggcaac gcattggcgc ggaaattgga taaacgttaa acccgaatgc
     1681 cgtctgaacg ccaaaacccc caccgctatc cgaaaaatgc tataaaatcc ccctgttcgc
     1741 ggcaaatgcc gtctgaacgc cgaatctgga cggcaggact ccctgcccgt catttttgtt
     1801 tgaaactgcc acaacatcag gagaaaatat gaaaaccttc ttcaaaaccc tttccgccgc
     1861 cgcactcgcg ctcatcctcg ccgcctgcgg cggtcaaaaa gacagcgcgc ccgccgcatc
     1921 cgcttctgcc gccgccgaca acggcgcgga gaaaaaagaa atcgtcttcg gcacgaccgt
     1981 cggcgacttc ggcgatatgg tcaaagaaca catccaaccc gagctggaga aaaaaggcta
     2041 caccgtcaaa ctggtcgagt ttaccgacta tgtgcgcccg aatctggcat tggctgaggg
     2101 cgagttggac atcaacgtct tccaacacaa accctatctt gacgacttca aaaaagaaca
     2161 caatctggac atcaccgaag tcttccaagt gccgaccgcg cctttgggac tgtacccggg
     2221 caagctgaaa tcgctggaag aagtcaaaga cggcagcacc gtatccgcgc ccaacgaccc
     2281 gtccaacttc gcccgcgtct tggtgatgct cgacgaactg ggttggatca aactcaaaga
     2341 cggcatcaat ccgctgaccg catccaaagc ggacattgcc gaaaacctga aaaacatcaa
     2401 aatcgtcgag cttgaagccg cgcaactgcc gcgtagccgc gccgacgtgg attttgccgt
     2461 cgtcaacggc aactacgcca taagcagcgg catgaagctg accgaagccc tgttccaaga
     2521 accgagcttt gcctatgtca actggtctgc cgtcaaaacc gccgacaaag acagccaatg
     2581 gcttaaagac gtaaccgagg cctataactc cgacgcgttc aaagcctacg cgcacaaacg
     2641 cttcgagggc tacaaatccc ctgccgcatg gaatgaaggc gcagccaaat aaggcagtcg
     2701 tataaaatga tgccgtctga accgtatccg tgttcagacg gcatttttgt cctttaatcc
     2761 gccattccct gccattccgc cgaatccggc gtatcgattc cgaacagcga caaagcgtgt
     2821 gcaacactgt gcgccactat gtcgtccgcc gtctgcggtt tgcggtacat cgcaggaaca
     2881 gggggaaaca ccacgccgcc catttccgtt acccgcttca tattgtccaa atgggcaagg
     2941 ttcagcggcg tttcgcgcac catcagcacc agccgccgcc tttccttcaa aaccacatcc
     3001 gccgcacgcg tcaagaggtt gtcgccgaag ccgtgcgcga ccgaggcaag cgtccgcatc
     3061 gaacaggggg cgaccagcat cccgtccgtt ttaaacgtac cgctggcaat gcacgccccg
     3121 atattgccga tcggatgcac gaagtccgcc aaggcatata cctcatctct cgcataagcc
     3181 gtttccgaag cgcgcgccat ctccgcacct ttcgatacca caaggtgcgt ttcgatatct
     3241 tgcgcgcgta aaagttccaa agccttcacg ccgtattgga aaccgctcgc cccactgatg
     3301 ccgattatca aacgccgtac catcatccgc ctttcccata aaaccgcctg caacggcaaa
     3361 ccggctatta tagtgaaaaa acagaaatcc gataaatacg gatacaaatt gtcggcaaca
     3421 cccaatatcc gataaaatat ccgatttaac atcctatctg aataggcacg ggagggcggt
     3481 atggcaaaag taaaaggcgg attggggcgc ggtttggatt cgctgctcgc caacggcgca
     3541 gacaacagca gcggcgaccg attgaccacg gttgcggtta aagatatccg gcccggccgc
     3601 tatcaggcgc gtgttcaaat cgatgacgaa gccttgcagg agctggcgga ttcgattaag
     3661 gcgcaaggcg tgatacagcc cgtcatcgtg cgcgaacacg gactgtcccg atacgaactg
     3721 attgcgggcg aacgccgttg gcgcgccgca cagattgccg gcctgaccga aatccccgcc
     3781 gttatcaaaa ccatcagcga cgaaaccgca ttggcaatgg gtttgatcga aaacctccag
     3841 cgcgaaaacc tcaaccccat cgaagaagca caaggcttga aacgccttgc cgacgagttc
     3901 ggactgaccc acgaaaccat cgcccaggcc gtcggtaaaa gccgaagcgc gatttccaac
     3961 agcctgcgcc ttttaagcct gcccgaaccc gtgcaggaaa tgctttacca acgccgcctc
     4021 gaaatgggac acgcccgcgc attgctgacc ctgcccgtcg tcgaacagct cgagttggcg
     4081 caaaaggccg tcaaaaacgg ctggtcggtg cgcgaagtcg agcgccgcag ccaagccgcc
     4141 cttcaaaaca aacgtcccga gcccaaaaag actgccgccg ccgacatcgg ccgcctgaat
     4201 gatttgctga ctgaaaaact gggtgtcaac gccgaaatca aaaccgccaa ccataaaaaa
     4261 ggcagaatca tcctgcattt cgacacgccc gaaaccttcg accatatctt gaagcagttg
     4321 ggcatagatt accgacctta attttgcggg atataccgtc tgaaatatag agaatagctt
     4381 tccagatttt aagtgggaaa tataattcta ttgacatttt ttctgcttca cgtaagaatc
     4441 gttttcctgt tttcattttt aattttcgag gaaattatga acacacgcat catcgtttcg
     4501 gctgcgttcg ttgcgttggc attagcaggt tgcggctcaa tcaataatgt aaccgtttcc
     4561 gaccagaaac ttcaggaacg tgccgcgttt gccttgggcg tcagcccaaa tgccgtaaaa
     4621 atcagcaacc gcagcaatga aggcatacgc atcaacttta ccgcaactgt gggtaagcgc
     4681 gtgagccaat gctatgttac cagtgtaatc agcacaatcg gcgttaccac ttccgatgca
     4741 atttgtttgg gaggcggaac gcacaaaggc aaaagtcaat gcaatgcttt gcttaaagcg
     4801 gcaggccgtt gctaatcctt tattcggaaa aggtcgtctg aaaatatttt cagacgatct
     4861 tttatttatt gagcaaattc cccaaactgc cgacaatccg accgataaac tgctacaatt
     4921 tcgcgttgat tttttattat ttccacgtaa agcaaacaaa tcacgtaaga acattaaaag
     4981 tgtaaagaaa ttgcggacaa actccttaat atcctgtaat tatatgtaat gtgtgttaga
     5041 atgacacctg tcgccgttat tcaggcggcg agcgcggcgg attgggatac gttgtttcac
     5101 aaagattaac tgtcgcttga cgtaataagg cttctaaatt atattagccg cgccccaaat
     5161 ccgaggcgga aacattccct ttatgaagca gattatcatc ctacaatccg ccgtattgtc
     5221 catatgcgcc gcagttgcct ttgctgtatg gggttttgcc ggattccttt cggcggtcgg
     5281 tggcggtttg tcctacctgc ttcccacgtt tgttgcagtt ttacttttaa aacttttcag
     5341 gggaaaccct ttcctgcaaa gcaggatgtt cgtcttcgga gagattttaa aagtagtgct
     5401 gtcgctgttg tccatgctcg ccgtatttgc tgtatggcat caatcgttgg tgttcgcccc
     5461 gtttctgatg gggctgctcg gtgtcagcca tttggttttt ttagtattgt tgagagtgaa
     5521 agattatggc aggtgaaacc attaccgctg ccgactacat caagcaccac ttgcagagct
     5581 tgaccagttt gtcggatgtt actcagggtc agggactgaa aaacattgct gatttttcgt
     5641 ttattaacct tgatgccgtc ttttttgccg tcctgttggg cgtaatcggc agcttcctgt
     5701 tgtggcgcgg tgcgaaaaaa gcaacggcag gcgttcccgg acgtttccag gctgccgtgg
     5761 aaatcttgtt tgagtttgtg gacgatatgt gtaagagcat cattcacaac gaaaagtcta
     5821 gaaaagccgt cgcgccgttg ggtctgacgc tgtttgtctg gatttttctg atgaacgcga
     5881 tggatatgct gccggtcgat ttgctgccga tggtatggca gggcattacc ggcaaccatc
     5941 acgccctgct gcgcgtcgta ccgactgccg atttgaacac cactttggca ctcgctgtcg
     6001 gcgtgttgct gatttgtatc tattacaaca tcaaaatcaa aggattgggt ggctggtttc
     6061 acgagttgtt cagcgcgccg ttcggtgcaa aactcgcacc tgcgaacttt ctgttgaatt
     6121 tggtcgagtt tctttctaaa accgtatccc acggtatgcg gttgttcggc aatatgtatg
     6181 caggcgagtt ggtattcttg ttgatagcct tgcttggcgg tgcttgggcg gcttccggca
     6241 gcgtcgaagt catggatccg attctgtttg tattccacat tattgccggt ttggcatggg
     6301 cgattttcca tattttggtg attaccctgc aggcgtttat tttcatggcg ttggcgttcg
     6361 tctatatcgg acaggcacat gatgcgcact gattttccta agtagtttgt ttttgtagtt
     6421 taacctttgt ttctttaagg agtttaaaat gggtttgatt gctatcgcat gtggtttgat
     6481 cgttgcattg ggtgcattgg gtgcctctat cggtatcgca atggtcggtt ctaaatattt
     6541 ggagtcttct gcccgtcagc ccgaactgat cggtccgctg caaaccaaac tgttcctgat
     6601 tgccggtttg attgatgccg cattcttgat tggtgtcgcc attgcactgc tgttcgcctt
     6661 cgttaacccg tttgcaggtg cataatcagg acggattcgt ccgttccgta caggcgcagc
     6721 ctgtttgatt aaccccagta cgaaggttaa gtaacgtgaa tatcaatgca acattattcg
     6781 ctcaaatcat cgtctttttc ggtttggtat ggtttaccat gaaattcgtg tggccgccga
     6841 ttgcaaaagc tttggatgag cgtgccgcaa aagtcgccga aggcttggct gccgccgagc
     6901 gtggtaaaag cgattttgag caggctgaaa aaaaggttgc agaactcttg gcagaagggc
     6961 gtaatcaggt ttccgaaatg gttgccaacg ccgaaaaacg tgccgccaaa attgtcgaag
     7021 aagccaaaga acaggcttct tccgaggcgg cgcgcattgc agctcaggca aaggccgatg
     7081 tggagcagga attgttccgc gcacgcgaat ccctgcgcga gcaggttgcc gtgttggctg
     7141 tcaaaggtgc cgaatctatt ttgcgcagcg aagtcgatgc ttccaaacac gcaaaactgc
     7201 tcgataccct gaaacaggag ctgtaatctt atggcagagt tcgcaacgat tgccagacct
     7261 tatgcaaagg cattgttcgg tctggctcag gaaaaaaacc aaattgagtc ttggttgggc
     7321 ggactggaaa aacttgcggc ggttgttcag gaagggaagg tggcttcatt gattgaccgt
     7381 cctgaaacga atgcttcaga aaaagcagat atcctcatcg atttggtcgg tttgaaagac
     7441 aaggagttga aaaactttgt tatcgtcttg gccgggcaga aacgtttgtc gatattgccg
     7501 gaagtatatg ctcaatatca agacttgacc ttatcattca accatatcaa atctgccatc
     7561 atttacagtg cctatccgtt gaccgacaaa caggtcggcg agttggcgca aatgctgaat
     7621 aagcgtttcg acagcgagct gaaaatctct gtcgaaatcg aaccggagct gattggcggc
     7681 ataaaagttg aagtgggtga tcaggttttg gatttgtctg tacaaggcaa attgagtgcc
     7741 ttgtacacga ctatgacgaa ttaggagagt tttcatgcag cttaatcctg ctgaaattag
     7801 cgatttgatt aaagccaaga tcgaaaatct gtctgtaaat gccgaagtgc gtacccgtgg
     7861 tacggtgatt tcggtaactg acggtatcgt tcgcatccat ggtttgtcag atgcaatgca
     7921 aggtgagatg ctcgaattcc cgggtaacac tttcggcttg gcgatgaacc tggagcgcga
     7981 ctccgtcggc gccgtagtgt tgggcgagta cgaacatatt aaagaaggcg acacggttac
     8041 ctgtaccggt cgtatcttgg aagtgccggt cggacgcgaa ctggtcggac gcgtcgttga
     8101 tgcattgggt cggcctatcg acggcaaagg cccgattaat acaactttga ccgcccctat
     8161 cgaaaaaatc gcaccgggcg tgattgcgcg caaatcggtt gaccagccga tgcaaaccgg
     8221 tctgaaggcg attgactcta tggttcctgt cggtcgcggt cagcgtgagt tgatcattgg
     8281 tgaccgtcaa accggtaaaa ctgccgtagc actggatgcc atcgtcaacc aaaaaggtac
     8341 gggtgttatc tgtatctatg tcgctatcgg tcaaaaagca tcttctattg ccaacgtggt
     8401 ccgcaaattg gaagagcatg gcgcgatgga acacacgatt gtggttgctg caactgcttc
     8461 tgaagccgct gcactgcaat acatcgcacc ttactccggt tgtacgatgg gtgaattctt
     8521 ccgcgaccgc ggcgaagatg ccttgattgt ttatgacgat ttgtccaaac aggctgtggc
     8581 ttaccgtcaa atttccctgc ttttgcgccg tccgcccggc cgcgaagcct atcccggcga
     8641 tgtgttctac ctgcactccc gtctgttgga acgtgcggca cgtgtcaatg aacacgaagt
     8701 ggagaaattg accaacggcg aagtaaaagg caaaaccggt tctctgactg ctttgccgat
     8761 tatcgaaacc caagcgggcg acgtatctgc tttcgttccg actaacgtca tttcgattac
     8821 cgacggtcag attttcttgg aaaccgacct cttcaacgcc ggtatccgtc ctgcaatcaa
     8881 tgccggtatt tccgtatccc gcgtaggcgg tgctgcacaa accaaagtga ttaaaaagct
     8941 gggtggcggt atccgtttgg cgttggcgca atatcgtgaa ttggcggcgt tctcgcaatt
     9001 tgcatccgat ttggatgaag ctacgcgcaa acaattggag catggcgaag tcgtaaccga
     9061 actgatgaaa cagaaacagt tcagtacgtt gaatacggct gaaatggctt tgaccctttg
     9121 ggcaatcaac aacggttcgt attctgatgt tccggttgcc aaagctctgg cttttgaatc
     9181 tgaatttttg agctttgtcc gtacccaaca tccggaagtt ttggaagccg tcaatgcttc
     9241 aggtgcaatg tccgacgaga gcgagaaaac gcttgaagca gccatgaaat ccttcaaatc
     9301 ttcttacgcc tatcaggcat aaggcttgaa gtgaaaggag tctgaaatgg cagtaggaaa
     9361 agagattctc accaaaatcc gcagtgttca gaatacccaa aagatcacta aagcgatgca
     9421 gatggtgtca acctctaaaa tgcggaagac tcaggaacgg atgcgtttgg cgcgtccgta
     9481 tgccgaaaaa gtgcgtatgg tgatgagcca tcttgcgcaa accaataccg atcatggtat
     9541 tccgttactg gaatctcatc gggaaatcag acgtgtcggt tttattttga ttacgtctga
     9601 taagggtttg tgtggcggtt tgaacgccaa cgtgctgaaa aagtttttgg cacaagttca
     9661 agagtatcgg aatcaaggta ttgaagagga aatcgtatgc cttggcagta aaggtctgat
     9721 ggcgtgtcag agcattggtc tgaatgtggt tgccagtgcc gtaaatttgg gcgatacccc
     9781 aaaaatggaa atgctgctcg gacctttgac agaactcttc caacggtatg agaaacatga
     9841 aattgacaga atccatctgg tgtattcggg ttttgtcaat accatgcgtc aagaaccgag
     9901 aatggaagta ttgctgccta tcggtgagaa cgtgattggc gattcagctc ccaaatcacc
     9961 gttcagctgg gaataccgct acgaaccgac tgcacttgca gtgttggaat atctggttcg
    10021 ccgctattta gagtctgtgg tttatcaggc gttgagcgac aatatggcat ccgaacaggc
    10081 agcccgcatg gttgccatga aagctgcaac agacaatgca ggcaatgcca tcaaagagtt
    10141 gcgtttggta tataacaaat cgcgtcaagc tgcgattacc acggaattgt cagaaattgt
    10201 agcaggtgcg gcggctgtct gatgccgtct gaatcctgta cggaaattag gatacgataa
    10261 tgagccaagg caaaatcgta caaattatcg gtgcggttgt tgacgtggaa tttccacgcg
    10321 acatgattcc gcgcgtttac gacgctttga aattagacga aaacggtctg actttggaag
    10381 tccaacagct tttgggcgac ggcgtagtcc gtgccattgc gatgggcagc tcggacggtt
    10441 tgaaacgcgg catgactgtg agcaataccg gtgcgcccat tactgtgccg gtaggtaaag
    10501 gtacgttggg acgcattgtc gatgtattgg gaacgcctgt tgacgaagca ggtccgatcg
    10561 ataccgacaa gagccgtgcc atccaccaag ctgcccctaa gtttgacgaa ctgtcttcca
    10621 caaccgaatt gctcgaaacg ggcattaaag tgattgactt gctgtgtccg tttgccaaag
    10681 gcggtaaagt aggtctgttc ggcggtgccg gtgtgggtaa aaccgtgaac atgatggaat
    10741 tgatcaacaa catcgccaaa gcgcacagcg gcttgtccgt gttcgcaggc gtgggtgagc
    10801 gtacccgcga aggtaacgac ttctaccacg agatgaaaga ttccaacgta ttggataaag
    10861 tggcaatggt ttacggtcag atgaacgaac ctccgggcaa ccgtttgcgc gtcgcattga
    10921 ccggtttgac catggcggaa tacttccgtg acgaaaaaga cgaaaacggc aaaggccgcg
    10981 acgtattgtt cttcgtggac aacatctacc gttacaccct ggctggtacc gaagtatccg
    11041 cattgttggg tcgtatgccg tctgcagtgg gctaccaacc gacattggca gaagaaatgg
    11101 gtcgtttgca ggagcgtatt acctctaccc aaaccggttc tattacttcc atccaagccg
    11161 tatatgtacc tgcggacgac ttgaccgacc cgtctccggc aacaacgttc gcccacttgg
    11221 acgcaaccgt cgtattgagc cgcgatattg cctctttggg tatttacccg gcagtcgatc
    11281 cgcttgattc tacttcgcgc caactggatc cgatggtatt gggtcaagag cactacgacg
    11341 tagcgcgcgg cgtacagtcc accctgcaga aatacaaaga attgcgcgac atcatcgcca
    11401 tcttgggtat ggacgaattg tctgacgaag acaaactgac cgtaatgcgt gcgcgtaaaa
    11461 tccaacgctt cctgtcccaa ccgttccacg ttgccgaagt gtttacaggt tctccgggca
    11521 aatatgtcgc cctgcgcgat accattgccg gcttcaaagc catcttgaac ggcgaatacg
    11581 accatctgcc cgaacaggca ttctacatgg tcggcagcat cgaagaagcg gttgagaaag
    11641 cgaaaacctt aaactgagga ggtcggcatg agcatcatgc aagttgaggt ggtcagtagc
    11701 gagcaaaaca tctattcggg cgaagccagc tttgtagtgg ttccgaccgt tcaaggtgag
    11761 cttggtattt acccgcgaca cgagccgatt atgagtttgg tgcggccggg ggctttgcgt
    11821 ttgaccgttc cgggcgagga taaagaggtt ttggttgctg tttccggcgg tgttttggaa
    11881 gtacagcctg ataaagtaac tatcttggcg gatgttgccg tccgcagtgc ggagatggat
    11941 caggcacgtg cggaagaggc gaaaaaagcc gcagaagcgg gcatttccca agctaaagac
    12001 gataaggctt tggcggaggc gcataaagca ttggctgctg cgattgcaca gctcaaaact
    12061 ttggactata tccgttcgca caagaaataa acttgtttgg tttggaaaag cacgaccgtt
    12121 tggtcgtgct ttttattttc cggatttaaa ttaaagactg tgtttggata tggcgttggc
    12181 aggcatagcc tgctttaagg tattcaatag ggcagcctgc cgcctaaccg aaacatatag
//
LOCUS       DBBZXU010000056        12175 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.056, whole genome shotgun sequence.
ACCESSION   DBBZXU010000056 DBBZXU010000000
VERSION     DBBZXU010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12175)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12175)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12175
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.056"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            168..1091
                     /locus_tag="ACJJDE_001318"
     CDS             168..1091
                     /locus_tag="ACJJDE_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HGG7541240.1"
                     /translation="MENQRPLLGFALALLAAMTWGTLPIAVRQVLKFVDAPTLVWVRF
                     TVAAAVLFVLLALGGRLPKRRDFSWCSFRLLLLGVAGISANFVLIAQGLHYISPTTTQ
                     VLWQISPFTMIVVGVLVFKDRMTAAQKIGLVLLLAGLLMFFNDKFGELSGLGAYAKGV
                     LLCAAGSMAWVCYAVAQKLLSAQFGPQQILLLIYAASAAVFLPFAEPAHIGSLDGTLA
                     WVCFAYCCLNTLIGYGSFGEALKHWEASKVSAVTTLLPVFTVIFSLLGHYVMPDTFAA
                     PDMNGLGYVGALVVVGGAVTAAVGDRLFKRR"
     gene            complement(1156..2544)
                     /gene="fumC"
                     /locus_tag="ACJJDE_001319"
     CDS             complement(1156..2544)
                     /gene="fumC"
                     /locus_tag="ACJJDE_001319"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045239 - tricarboxylic acid cycle
                     heteromeric enzyme complex [Evidence IEA];
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006106 - fumarate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HGG7541241.1"
                     /translation="MNTRTEHDTMGNVEVPSEAYWGAQTQRSRNNFKIGGETLPQPLI
                     YALALVKKAAAATNVSLGRIKPEQADLITQAADDVLNGRLDGQFPLVVWQTGSGTQSN
                     MNMNEVLANRANEIAGTGLAAYQPVHPNDHVNHAQSTNDAFPTAIHVAAAIEINRHLI
                     PAVKALRDTLDKKAQAFAPIVKIGRTHLQDATPLTLGQEFSGYVSQLDHGLGRLNDAL
                     KDLYELALGGTAVGTGLNSHPEYAEKAAAKLAELSGLPFVSAPNKFEALGGRDAAVAA
                     SGALKTLAASLNKIANDIRWLASGPRCGLGEIKIPENEPGSSIMPGKVNPTQCEAMTM
                     VCCQVFGNDVTIGMAGASGNFELNVYMPVIAYNLLQSIRLLGDACNSFNEHCAVGIEP
                     VPEKIDYFLHHSLMLVTALNRKIGYENAAKVAKTAYKNDKSLRETAVELGLLTGEEFD
                     ELVVPADMVHPR"
     gene            complement(2685..4664)
                     /gene="tkt"
                     /locus_tag="ACJJDE_001320"
     CDS             complement(2685..4664)
                     /gene="tkt"
                     /locus_tag="ACJJDE_001320"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HGG7541242.1"
                     /translation="MSQLANAIRFLSADAVQKANSGHPGAPMGMAEMAETLWTKFLNH
                     NPANPKFYNRDRFVLSNGHASMLLYSLLHLTGYNLSIEDLKNFRQLHSKTPGHPEYGY
                     TDGVETTTGPLGQGIANAVGMALAEKILAAEFNKDGLNIVDHYTYVFMGDGCLMEGVS
                     HEACSLAGTLGLGKLIVLYDDNNISIDGKVDGWFTENIPQRFESYGWHVVPNVNGHDT
                     AAIQAAIEAARAETGKPSIICCKTLIGKGSANKEGSHKTHGAPLGADEIEATRKHLGW
                     TYPAFEIPQEIYDAWNAKEQGAKLEADWNELFAQYQAKYPAEAAEFVRRMDKKLPENF
                     DGYVQTALKEVCAKAETIATRKASQNSIEILAKELPELVGGSADLTPSNLTDWSNSVS
                     VTRDKGGNYIHYGVREFGMGAIMNGLALHGGVKPFGATFLMFSEYERNALRMAALMKI
                     NPVFVFTHDSIGLGEDGPTHQPIEQTATLRLIPNMDVWRPCDTAESLVAWAEAVKAAD
                     HPSCLIFSRQNLKFQARSEQQLNDIKRGGYIISEAQGNAQAVIIATGSEVELALEAQK
                     ALAAQNIAVRVVSMPSTNVFDRQDAAYQATVLPEGLPRIAVEAGHADGWYKYVGLNGA
                     VVGINRFGESAPADLLFKEFGFTVDNVVDTVKSVL"
     gene            5191..6687
                     /gene="ccoG"
                     /locus_tag="ACJJDE_001321"
     CDS             5191..6687
                     /gene="ccoG"
                     /locus_tag="ACJJDE_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003708970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0008535 - respiratory chain complex IV
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase accessory protein CcoG"
                     /protein_id="HGG7541243.1"
                     /translation="MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGE
                     RIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGV
                     GDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
                     LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFA
                     TAFYGFMTFFFAHIMREKVCLHMCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTV
                     NKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLI
                     RYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDR
                     GVLVRENAKGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETV
                     TLPVQVSTIPEYADKGSHPIEFTFQYRESGAPDGKPVVLEEDATFIGE"
     gene            6690..7238
                     /locus_tag="ACJJDE_001322"
     CDS             6690..7238
                     /locus_tag="ACJJDE_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FixH family protein"
                     /protein_id="HGG7541244.1"
                     /translation="MSQNTPIKPWYKHVWPWILMAGPIFVVIASVAMFFVAQQHATDL
                     VTDDYYKDGKHIDIQLHRDEEAVRRHIGVQVLISPDMNAAKVFVGGEFDGKQPLNLLL
                     MHPTRKADDQTVALKPVGSAQNGRAEYEAVFKTLSPTNHWYVRVEDAAGVWRVENKWI
                     TSQGNAVDLTPMDKLFNNAGSK"
     gene            complement(7580..8755)
                     /locus_tag="ACJJDE_001323"
     CDS             complement(7580..8755)
                     /locus_tag="ACJJDE_001323"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent flavin oxidoreductase"
                     /protein_id="HGG7541245.1"
                     /translation="MQNIFDPLVIRGKSLTPIVQGGMGVGVSASGLSSAVARENGIGT
                     IASVDLRHLHEDLLAESQINPSEEKYTSLNCTALDREIQKAKSASEGKGLIAVNVMKA
                     VKDHAAYVRQACESGADAVVMGAGLPLDLPEMTEGYHKYVALLPILSESRGINIVLKR
                     WMKKGILPDAIVVEHPAHAAGHLGASTVEGVNDAKFDFKRVIEETFEVFKSLGLESEK
                     IPLILAGGMANFEKVKTALKNWGASAVQIGTAFAVTEEGDAHLNFKKTLAGAETEKVV
                     EFMSVAGLPARGVRTKFLDSYIKRESKLQTNAKADPRRCTQGLNCLTSCGLRDGLSKA
                     GQFCIDIQLAAAFRGEVDKGLFFRGKDPLPFGNAIRTVRETIQYLLTGSEPVATLGR"
     gene            complement(9314..9388)
                     /locus_tag="ACJJDE_001324"
     tRNA            complement(9314..9388)
                     /locus_tag="ACJJDE_001324"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9353..9355),aa:Glu,seq:ttc)
     gene            complement(9406..9482)
                     /locus_tag="ACJJDE_001325"
     tRNA            complement(9406..9482)
                     /locus_tag="ACJJDE_001325"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9446..9448),aa:Arg,seq:acg)
     gene            9600..10985
                     /locus_tag="ACJJDE_001326"
     CDS             9600..10985
                     /locus_tag="ACJJDE_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PolC-type DNA polymerase III"
                     /protein_id="HGG7541246.1"
                     /translation="MIVASRWPLLEKVFLRFGMPVAVVDLESTGGNLYEDRVTEVALV
                     KFEQGRVVRHEWLVNPQKPIPQFVAGLTGISDGMVADAPVFAEIAGELFSVLKGCVLV
                     AHNSRFDYTFLKHEFHRAGIGFSSPALCSVQLSRCLYPQFYKHSLDSIIERLGIVVED
                     RHRAMADVSALCDYLEYSLSEHGVEAWIRQCFRLMNPKPLPAALPERLREQLYGLPDS
                     MGVLACFDGGGKVNYIGTFERVYSEVSALLDSGKASFDWCNTEAVRFFPALGRLHAYK
                     IKAELVRRYHSGCYVSAKNLLKTFTTVRFEKGSDGMLNAKTTALKNGVTDNPPTGLFA
                     NKKAARRALSSWAETYGLCPAAAGILSDGYTEDEPCPVYVSGRCDKACGRSDEQVLAF
                     AHKLPILDWGKMHEVEITETDPLTGEKVVLHGMGGALEMGDGLWYFDKDLPDAFKAKF
                     KTDRKNIKEIG"
     gene            complement(11196..11975)
                     /locus_tag="ACJJDE_001327"
     CDS             complement(11196..11975)
                     /locus_tag="ACJJDE_001327"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004324 - ferredoxin-NADP+ reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP reductase"
                     /protein_id="HGG7541247.1"
                     /translation="MAASPEAKFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSR
                     LGFYEGEGFIWRAYSIVSAEYADTLEYFAVLIQDGPMSARFAKMQQGDTILLDKNATG
                     FLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDR
                     LAALAEHPLVGEYGHSFRFVPVTTRAANPSGLGGKRIPELLKNNSIEQALHTKFTPES
                     TRFMICGNPEIVKDTFQTLLDMGYAMHRNRIPGQIMMENGF"
BASE COUNT         2724 a         2812 c         3506 g         3133 t
ORIGIN      
        1 aaattcaggc ggtgttttca aatagcgcga agcaatagcc gagcttcagc cggtttgttt
       61 gaaatcaaag ggttggaatc aaacgccaaa cgcttgaacc atcattgccc gatgcggcaa
      121 accggcatcg tccggcaata cggttgttta aaaataggaa aatcaggatg gaaaaccaaa
      181 ggccgctcct aggcttcgcg ttggcacttt tggcggcgat gacgtgggga acgctgccga
      241 ttgccgtgcg gcaggtattg aagtttgtcg atgcgccgac gctggtgtgg gtgcgtttta
      301 ccgtggcggc ggcggtattg tttgttttgc tggcactggg cgggcggctg ccgaagcggc
      361 gggatttttc ttggtgctca ttcaggctgc tgctgctcgg cgtggcgggc atttcggcaa
      421 actttgtgct gattgcccaa gggctgcatt atatttcgcc gaccacgacg caggttttgt
      481 ggcagatttc gccgtttacg atgattgttg tcggtgtgtt ggtgtttaaa gaccggatga
      541 ctgccgctca gaaaatcggc ttggttttgc tgcttgccgg tttgcttatg ttttttaacg
      601 ataaattcgg cgagttgtcg ggtttgggcg cgtatgcgaa gggcgtgttg ctgtgtgcgg
      661 caggcagtat ggcatgggtg tgttatgccg tggcgcaaaa gctgctgtcg gcgcaattcg
      721 ggccgcaaca gattctgctg ttgatttatg cggcaagtgc cgccgtgttc ctgccgtttg
      781 ccgaaccggc acacatcgga agtttggacg gtacgttggc gtgggtttgt tttgcgtatt
      841 gctgcttgaa tacgttaatc ggttacggct cgttcggcga ggcgttgaaa cattgggagg
      901 cttccaaagt cagcgcggta acaaccttgc tccccgtgtt taccgtaata ttttctttgc
      961 tcgggcatta tgtgatgcct gatacttttg ccgcgccgga tatgaacggt ttgggttatg
     1021 ttggcgcact ggtcgtggtc gggggtgcgg ttacggcggc ggtgggggac aggctgttca
     1081 aacgccgcta gttcgcaggc aacggaaaat gccgtctgaa cgaggtttca gacggcattt
     1141 tatttgaggg aaagattagc gcggatgaac catatcggca ggaacgacca gttcgtcaaa
     1201 ttcttcgccc gtcagcaagc ccaactcaac ggcggtttcg cgcagcgatt tgtcgttttt
     1261 gtaggcggtt ttggcgactt tggcggcgtt ttcgtaaccg attttgcggt ttaacgcggt
     1321 aacgagcatc agggaatggt gcaggaaata gtcgattttt tccggtacgg gttcgatgcc
     1381 gacggcgcag tgttcgttga agctgttgca cgcgtcgccc aagaggcgga tggattgcaa
     1441 gaggttgtag gcgataacgg gcatatagac gttcagctcg aaattgcccg acgcgcccgc
     1501 cataccgatg gtaacgtcgt tgccgaacac ttggcagcac accatcgtca ttgcttcgca
     1561 ttgggtcggg ttgactttgc ccggcatgat ggacgaaccc ggctcgtttt cggggatttt
     1621 gatttcgccc aaaccgcaac gcgggccgct tgccagccag cggatgtcgt tggcgatttt
     1681 attcaggctt gccgccagcg ttttcaatgc gcccgaagcg gcaacggcgg catcgcgtcc
     1741 gcccaaggct tcaaatttgt tcggcgcgct gacaaacggc aagccagaca gttcggcgag
     1801 tttagcagca gctttttcgg cgtattcggg atggctgttc aaacccgtgc cgaccgccgt
     1861 accgcccaaa gcaagttcat acaagtcttt aagcgcatcg ttcagacggc ctaaaccgtg
     1921 atcaagctgg gaaacgtagc cggaaaattc ctgtcccaaa gtcagcggcg tcgcgtcttg
     1981 caagtgggtg cggccgattt taacaatggg ggcgaaagct tgggcttttt tgtccaaggt
     2041 atcgcgcagg gcttttacgg cggggatgag gtggcggttg atttcaatcg cggcggcaac
     2101 gtggatagcg gtcgggaatg cgtcgttggt cgattgcgcg tggttcacat ggtcgttggg
     2161 atggacgggc tgataagccg ccaaacccgt accggcgatt tcgttggcgc ggtttgccag
     2221 cacttcgttc atgttcatat tggactgcgt gccggagccg gtctgccaaa ccactaaagg
     2281 aaactgtccg tcaagcctgc cgttcaacac atcatccgcc gcctgcgtaa tcaaatccgc
     2341 ctgttccggc ttaatcctgc cgagggaaac attggtcgcg gcagcggctt ttttcaccaa
     2401 cgccaaagca taaatcagcg gctgcggcag ggtttcgccg ccgattttga aattgttgcg
     2461 gctgcgctgg gtctgcgcgc cccaataggc ttcggacggg acttcgacat tgcccatggt
     2521 gtcgtgttcg gtgcgagtgt tcatacgttt ctccttttga aatgtgaata agagtgattc
     2581 gcaaatatta taatggagat tggtggaatg aggaagcatt aaggagggag ggtgtgaaaa
     2641 tgccgtctga aaagcgttca gacggcattt gtttaggtgt gggtttacag cacggatttc
     2701 actgtatcga ccacattgtc cacggtaaag ccgaattctt tgaagagtaa gtcggcaggg
     2761 gcggattcgc cgaagcggtt gatgccgacg actgcgccgt tcaaaccgac gtatttgtac
     2821 cagccgtcgg cgtgtccggc ttctacggcg atgcgcggca gaccttcggg caggacggtg
     2881 gcttgatagg cggcgtcttg gcggtcgaat acgttggtgg acggcatgga aacgacgcgt
     2941 acggcgatgt tttgcgcggc gagggctttt tgcgcttcca aagccagctc gacttcggaa
     3001 ccggtggcaa tgatgacggc ttgcgcgttg ccttgggctt cgctgatgat gtagccgccg
     3061 cgtttgatgt cgttcagttg ttgttcgctg cgcgcttgga atttcaggtt ttgacggctg
     3121 aaaatcaggc aggacggatg atcggcggct ttgacggctt ctgcccaagc caccagagat
     3181 tcggcggtgt cgcacggacg ccatacgtcc atgttcggaa tcaggcgcag ggtggcggtt
     3241 tgctcaatcg gctggtgggt cgggccgtct tcgcccaaac cgatggaatc gtgggtgaac
     3301 acaaatacag ggttgatttt catcagtgcc gccatgcgca aggcgttgcg ttcgtattcg
     3361 ctaaacatca ggaaggtcgc gccaaagggt tttacgccgc cgtgcagggc aagaccgttc
     3421 ataatcgcac ccataccgaa ctcgcgcacg ccgtagtgga tgtagttgcc gcctttgtcg
     3481 cgggtaacgg agacgctgtt tgaccagtcg gtcaggttgg acggggtcag gtcggccgaa
     3541 ccgcccacca attcaggcaa ctcttttgcc aagatttcga tgctgttttg gctggctttg
     3601 cgggtagcga tggtttcggc tttggcgcac acttctttca atgccgtctg aacgtacccg
     3661 tcaaagtttt ccggcagctt tttatccata cggcgcacaa attctgcggc ttcggcagga
     3721 tatttggctt gatattgcgc gaacagttcg ttccagtcgg cttccagttt cgcgccttgt
     3781 tctttggcat tccacgcatc gtaaatttct tgcgggattt caaaggcggg gtaagtccag
     3841 cccaaatgtt tgcgcgtggc ttcgatttcg tccgcgccca aaggtgcgcc gtgggttttg
     3901 tggctgcctt ctttgttggc actgcctttg ccgattaagg ttttgcagca gatgatggac
     3961 ggtttgccgg tttcggcacg tgcggcttcg atggcggctt gaatggcggc ggtgtcatga
     4021 ccgtttacgt taggaacgac gtgccagccg tagctttcaa agcgttgcgg gatgttttcg
     4081 gtaaaccagc cgtccacttt accatcaatg gaaatattgt tatcgtcata caaaacaatc
     4141 agtttgccca agcctaaagt gccggcgagt gagcaggctt cgtgcgatac gccttccatc
     4201 aggcagccgt cgcccatgaa gacgtaggtg taatgatcga cgatgttcaa accgtcttta
     4261 ttaaattcgg cggcaaggat tttttctgcc aatgccatac ccaccgcgtt ggcaatccct
     4321 tgccccaacg ggccggtcgt ggtttccacg ccgtcggtgt agccgtattc gggatggccg
     4381 ggggttttgc tgtgcagttg gcggaagttt ttcaagtctt caatgcttag gttgtagccg
     4441 gtcaggtgca gcaggctgta caacagcata gacgcgtggc cgttggagag gacgaagcgg
     4501 tcgcggttgt agaatttggg gttggcggga ttgtgattga ggaatttcgt ccacaatgtt
     4561 tccgccattt ccgccatacc cataggcgcg ccggggtggc cggaattggc tttttgaacg
     4621 gcatcggccg agaggaagcg gattgcgttt gccagttgag acattttgta ttttccttgc
     4681 tggtgtttcg gataagtgga taatcggaag gcgttgatta tcgcccgatt cgcttatgct
     4741 ttcaagaaaa gggcggacgc gtgggaaggc ggcggcaggg gacaggcggg gaaggatttt
     4801 cgatttgcgg gcgaagcctg ccattattcc ttttgaaata aaatgttata gattgtgtgc
     4861 cggattgtcg atagcgtttg tttatgagct tgcgccgtcg gttctgccga tatgggggtg
     4921 tcggtttttt tagtcttttt tttaaccgta ttcggatttt gttcgggcgg taaggtaaaa
     4981 tccaggcgtt ttgatgcgga tgggaaatgt atccgcccca tacatccgga cggcgcataa
     5041 agttgtacaa tagcggaaat atattttggg aaaaacggat tttctcaaaa cttgaaacac
     5101 aacgccttaa aaaacaagaa aaatgacgtc tgaaaagcaa acggcggcgg taacgggcaa
     5161 accatcaatc aaaaatctaa ggaatgcaga atgaccacgg aaaaccaagc cggcagtccg
     5221 gcatccggaa tcggcacgtc cgaacaaaca aaagccgcgc cgaaagcaaa aaaaacattc
     5281 gatccgcgag ccagcgtgat tcaaatccat cccgaaggcg aacgcatcca tccgaaaaag
     5341 gcggaaggac ggttcgccaa actgcgtatc gccgccgtat tggcgacgca gtttgtgttt
     5401 tacgtcattc cgtggttcaa ctggagcggc aggcaggccg tcgttttcaa tatccccgaa
     5461 cggcatttct tcattttcgg attgtcgttg ggggtgggcg atttgattta ccttgccttg
     5521 ctgctgatga tttgcgcctt cgggctgttt tggtggacga cgattgccgg gcgactgtgg
     5581 tgcggctatt cctgcccgca aacggtttac accgaaatta tgctgtggat cgacaacctg
     5641 gtcgaaggcg atagaaacaa acgcctgaag ctggaaaaat cgccgtggaa tttcactaaa
     5701 atccgcatca aagccaccaa atacctgttg attttccttg tctgcgcgtg gacgggcatc
     5761 acgtttgcag gctggtttgt ccctatccgc cagttcgttc ccgatttatt cactggagca
     5821 gcaggcggcg gcgcgatgtt tgccacagcg ttttacggct ttatgacctt cttcttcgca
     5881 catattatgc gcgaaaaagt atgcctgcat atgtgtccgt atgcacgttt ccaaagcgcg
     5941 atgttcgaca aggacacgct gattgtttct tatgacgcgg aacgcggcga accgcgcgga
     6001 gcccgcaaga aaacggtcaa caaggaagag gcgggtttgg gcgactgcat caactgtgcg
     6061 atgtgcgtcc aagtctgccc tgtcggcatc gacatccgca acggtctgca ataccaatgc
     6121 atcggctgcg ccgcctgtat cgacgcgtgc gatgagatta tggacaaaat gggctatccg
     6181 cgcggattaa tccgttatac gaccgaaagc gcgctggaac acgaatattc tgaaaaagac
     6241 attaaaaaac ggctgctcag accgcgcgtg gcaggttacg gcgcggtgtt ggcgttagtt
     6301 atcattgcct tcctggccgg tttgtccacg cgcaaaatgg tcgaggtcga tattttgaaa
     6361 gaccgtggcg tactggtgcg cgaaaacgcc aaaggctggc tggaaaacgc atacagcctg
     6421 cgtatcatca acaaaagtga aaaagaacag ctcattaccg caagtgtcaa aggctttgac
     6481 gaaatcgccc tgaccgggct gcccgaaggc ggtatcaagg ttgccccgcg cgaaacggta
     6541 acccttcccg tccaagtgtc caccattccg gaatacgcgg acaaaggcag ccaccctatc
     6601 gaatttacct tccaataccg cgaaagcggc gcgcccgacg gcaagccggt cgtcttggaa
     6661 gaagatgcaa cctttatcgg agaataaccg tgtctcaaaa cactccaatc aaaccttggt
     6721 acaaacacgt ctggccgtgg atcttgatgg cggggccgat ttttgtcgtc atcgccagcg
     6781 tcgctatgtt ttttgtcgca cagcagcacg cgacagattt ggttacggac gattattata
     6841 aagacggcaa acatatcgac atccagcttc atcgggatga agaagccgtc agacggcata
     6901 tcggggtgca ggttctcatt tcccccgata tgaatgcggc aaaagtgttt gtcggcggcg
     6961 agtttgacgg caaacagcct ttgaacctgc tgctgatgca cccgacccgc aaggcggacg
     7021 atcaaaccgt cgccctcaag cccgtcggca gcgcgcagaa cggcagggcg gaatatgagg
     7081 cggtgttcaa aaccctttcg ccgaccaacc actggtatgt gcgcgtggag gacgcggcag
     7141 gcgtgtggcg cgtcgagaac aaatggatta ccagccaagg caatgcggtg gatctgaccc
     7201 cgatggataa acttttcaat aatgccggaa gcaaataaaa aagccgtgtt ttcattgcat
     7261 tggtttgcca gatgcaatgt cgggcaggca ttgtttgatt attcggcgtg atggtctgat
     7321 ttatcggacg aaaataaatg tatctcatcc cgtttatttt ttaacactat tccagaacgc
     7381 agcctgaaaa atgccgtctg aagggcttca gacggcattt gtgttgtatg cccgacacaa
     7441 tgcggaaggc gttttgttta cataaaaacg tttttatttc tctccgtttt ttcgacacta
     7501 ttccgaaacg cagcctgaaa aatgccgtct gaaagccctt cagacggcat tttgtttgca
     7561 aatcaaatcc tacctgatgt cagcgtccga gcgttgcaac aggttcgctc cccgtcagca
     7621 gatattgtat cgtctcgcgg acggtgcgga tggcattacc gaagggcagc gggtctttac
     7681 ctctgaagaa caggccttta tctacttctc cacgaaatgc ggcagcaagc tggatatcaa
     7741 tacagaattg ccctgctttg gaaagcccgt cgcgcaggcc gcagctagtc aggcagttta
     7801 aaccttgggt acagcggcgc gggtcggctt tggcgtttgt ctgaagtttg ctttcacgct
     7861 tgatgtagct gtctaggaat ttggtgcgga caccgcgcgc cggcaaaccg gcaacagaca
     7921 taaattcgac tactttttca gtttccgcac cggcgagcgt ttttttgaag ttaaggtgtg
     7981 catctccttc ttcggtaacg gcaaaagccg taccgatttg aacggcggat gctccccagt
     8041 tctttagggc ggttttgact ttttcaaaat ttgccatgcc tcccgcaaga ataagcggga
     8101 ttttttcgct ttccagccct aaacttttga aaacttcaaa cgtttcctca atcacgcgtt
     8161 tgaagtcgaa cttggcatcg tttacgcctt caacggttga tgcacccaaa tgtccggccg
     8221 cgtgggcagg atgttcgact acaatcgcat cgggcaatat gccttttttc atccaacgtt
     8281 tcaagacgat attaataccg cgcgattcgg acagaatcgg cagcagcgcg acatatttat
     8341 gatagccctc ggtcatttcc ggcaggtcta aaggcagacc ggcacccatt acaaccgcat
     8401 ccgcccctga ttcgcaagcc tggcggacat atgcggcgtg gtctttgacc gccttcatca
     8461 cgttgaccgc aatcagccct tttccctctg aagcactttt ggctttttgg atttccctgt
     8521 ccaatgcggt acagttcaaa gacgtatatt tctcttcact cggattgatt tgggattcgg
     8581 cgagtaggtc ttcgtgaagg tggcgcaaat ccacactggc aatcgttccg ataccgtttt
     8641 cacgtgccac cgcgctggat aaacccgatg cggaaacacc gacccccata ccgccttgca
     8701 cgatgggggt aagggatttt ccacgaataa ccaaagggtc aaaaatattt tgcatcagtt
     8761 tctccgagta tacgaatcag tcaggctcat gaaaaatggt tctaactgtt ttagaactat
     8821 tgctcaaatt tggtattata ctctaaatat cgcggcggta aacaagaaag cagccggagc
     8881 ttcgggcata ttctgttacg cctgtttcaa tcgggagaga aaatattata gtgaattaac
     8941 aaaaatcagg acaaggcgac gaagccgcag acagtacaaa tagtacggaa aggcgaggca
     9001 acgccgtact ggtttaaagt taatccacta taaatttgat gatggcataa aaaagcccta
     9061 gtcagttgct gtcaaagggg attgttaaga aaagtaatgc cacgttgatg gggtgcaata
     9121 tatcaggcgt ttcaatcggg taaaatgttg gacggacacc gcatccggtt acgtgatatc
     9181 ggtttgcacg gcaaaggttt gaatatgatt cgattacgtc tgagagtctg atgaaggggg
     9241 taggtaaaga tatggtaatg aattgccgag gcaataaaaa tccccgaggg attatttcgg
     9301 gggatttgga atttggcacg cccacgggga atcgaacccc ggttaccgcc gtgaaagggc
     9361 gatgtcctaa ccgctagacg atgggcgcat attgtatttt cttactggcg cacccggagc
     9421 gattcgaacg cccgaccctc tggttcgtag ccagatactc tatccaactg agctacgggt
     9481 gcactgcaag aaagatttga attttagggt aatcatcgga ttctgtcaat tgttttgttg
     9541 gatgaaatgc cttaaaagtg taaaatatcg gtttgttgtt tgaatttaaa gagaataaaa
     9601 tgattgttgc ttcccgctgg cccttgctgg aaaaggtatt tttacggttt ggaatgcctg
     9661 ttgccgtggt tgatttggaa tcgacgggcg gcaatctgta tgaagacagg gtaaccgaag
     9721 tggctttggt caagtttgag cagggaaggg tggtgaggca tgagtggttg gttaatcctc
     9781 aaaaaccgat tccgcagttt gttgcggggc tgacggggat ttcagacggc atggttgccg
     9841 acgcacctgt ttttgcagag attgccggcg agttgttttc ggtattgaag ggttgtgtgc
     9901 tggttgcaca taacagccgt ttcgactata cgtttttaaa gcatgagttt catcgtgcgg
     9961 gtatcggatt ttcatcgcct gctttgtgca gtgtgcaact gtcccggtgt ctgtatccgc
    10021 aattttacaa gcacagcctg gacagtatca tcgaaaggtt ggggattgtt gtggaagaca
    10081 ggcatcgtgc gatggcggat gtatcggcat tgtgcgatta tttggaatac agtctgtcgg
    10141 aacacggggt cgaggcatgg atcaggcagt gtttccgttt gatgaatccg aaaccgctgc
    10201 ctgccgcgct gcccgaacgg ttgagggaac agttgtacgg tttgcctgac agtatggggg
    10261 tgctggcttg tttcgacgga ggagggaaag taaattacat cggtacgttt gaacgggtat
    10321 atagcgaggt ttcggcttta ttggattccg gaaaagcctc gtttgattgg tgcaatacgg
    10381 aggcagtccg tttttttccc gcattgggca ggctgcatgc atataagatt aaagcggaat
    10441 tggtcaggcg ttatcattcg ggttgttatg tgtctgccaa aaatctgctg aaaacattta
    10501 cgaccgtcag gtttgaaaaa ggttcagacg gcatgttgaa tgcgaaaaca acggctttga
    10561 aaaacggtgt gacggataat ccgcctaccg gattatttgc caataaaaag gcagcgagac
    10621 gggctttgtc gtcgtgggcg gaaacatacg gattgtgtcc tgccgcagcc ggtatcctgt
    10681 cggacggtta tacagaggat gagccttgtc ccgtatatgt ttcaggccga tgcgataagg
    10741 cgtgcggccg ttctgacgaa caggttttgg cgtttgcaca caagttgcct attttggatt
    10801 ggggaaaaat gcatgaggta gaaattaccg aaactgatcc tttaacgggg gaaaaagttg
    10861 ttctgcatgg aatgggcggc gcattggaaa tgggtgacgg gctttggtat ttcgataaag
    10921 atttaccgga tgcgtttaag gcgaagttta aaacggacag gaaaaatatt aaggaaatcg
    10981 gttaaatcga taccggttga tgaaagccgg taagtatgta aacagccgtt cgtattgatt
    11041 gcctaatcgg tttgggttgg aatgtgttgc cgtttgcagg taatgtgtcc gaagatgccg
    11101 tctgaatttt ttcagacggc atttttgccg acgcggtttt cgtgccgtgt cggtttgctc
    11161 ttccaaccga aggcatcgga caagcagggt ggtttttaga agccgttttc catcatgatt
    11221 tgaccaggaa tgcggttgcg gtgcatggcg taacccatgt caagcagcgt ttggaaggtg
    11281 tctttgacta tttccggatt gccgcaaatc ataaaccgtg tggattcggg ggtaaacttg
    11341 gtatgcagcg cctgttcgat gctgttgttt tttaagagtt ccggaatgcg ttttccgcct
    11401 aagcccgagg ggttggcggc acgggtggta acagggacga aacggaacga gtgtccgtat
    11461 tcgcctacca ggggatgttc ggccaatgcg gcgagccggt cgttgaaaat caattcttcg
    11521 ggaaaagata cggaatgtat caggttgacg gtatcgaaac gctgccggat ttcgggttgt
    11581 tcgagaatgg aaaggaaggg ggcgatgccg gagccggtgc agagcatcac caaatccttg
    11641 ccgtcgggga agcgttcggg caggaggaag ccggtggcat ttttatcgag caggatggta
    11701 tcgccctgtt gcattttggc gaaacgggcc gacatggggc cgtcttggat gagtacggca
    11761 aaatattcga gcgtgtcggc atattctgcg gaaacgatgg agtaggcacg ccaaataaag
    11821 ccttcccctt cgtagaaacc gagtcgggag aactgtccgg ctttaaaacg gtaggattcg
    11881 ggacggctga tggcgaaagt gatgagtttc ggcgtgtggt gtttgaccca caaaatcttt
    11941 tcttcagtga attttgcttc gggcgaggct gccatgttgt tgtccttgag tgtgtttgtc
    12001 gggattatag ccaatttggg tgtttttttc cgcattgacg gtctgagacc tttgcaaaat
    12061 tcctttccct cccgacagcc gaaacccaaa cacaggtttt cggctgtttt agccccaaat
    12121 acctcctaat tttacccaaa tatcccctta atcctccccg gatacccgat aatca
//
LOCUS       DBBZXU010000057        12076 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.057, whole genome shotgun sequence.
ACCESSION   DBBZXU010000057 DBBZXU010000000
VERSION     DBBZXU010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 12076)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12076)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12076
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.057"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACJJDE_001328"
     CDS             complement(332..1108)
                     /gene="lpxA"
                     /locus_tag="ACJJDE_001328"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008780 -
                     acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine
                     O-acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HGG7541248.1"
                     /translation="MTLIHPTAVIDPKAELDSGVKVGAYTVIGPNVQIGANTEIGPHA
                     VINGHTSIGENNRIFQFASLGEIPQDKKYRDEPTKLIIGNGNTIREFTTFNLGTVTGI
                     GETRIGDDNWIMAYCHLAHDCVIGNHTIFANNASLAGHVTIGDYVVLGGYTLVFQFCH
                     IGDYAMTAFAAGVHKDVPPYFMASGYRAEPAGLNSEGMRRNGFTAEQISAVKDVYKTL
                     YHRGIPFEEAKADILRRAETQAELAVFRDFFAQSARGIIR"
     gene            complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACJJDE_001329"
     CDS             complement(1195..1644)
                     /gene="fabZ"
                     /locus_tag="ACJJDE_001329"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HGG7541249.1"
                     /translation="MDVQLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVT
                     INEPQFQGHFPDLPVMPGVLIIEAMAQACGTLAILSEGGRKENEFFFFAGIDEARFKR
                     QVIPGDQLVFEVELLTSRRGIGKFNAVAKVDGQVAVEAIIMCAKRVV"
     gene            complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACJJDE_001330"
     CDS             complement(1678..2724)
                     /gene="lpxD"
                     /locus_tag="ACJJDE_001330"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016410 - N-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HGG7541250.1"
                     /translation="MIPATYTLSQITARLGGEWRGEDISVTAVRPLADAQAEHISFLA
                     NPKYKAEVHDSSAGAVIVSAKAADGFEGRNLIVADDPYLYFAKVARLFSPVVKARGGI
                     HPTAVVEPGATVPASCEIGANVYIGANTVLGEGCRILANAVVQHDCKLGDEVVLHPNA
                     VVYYGCTLGRRVEIHSGAVIGADGFGLAFAGDSWFKIPQTGAVTLGNDVEIGSNTNID
                     RGAMSDTTVGNGTKIDNQVQIGHNCKIGSHTVIAAKTGISGSVTIGSYCIIGGGVGTV
                     GHIEIADKTTIGGGTSVTHSITESGKHLAGIFPMSTHKEWARNAVYIHRLSEMNKRLK
                     TLEQQLSDAGQDSK"
     gene            complement(2757..3257)
                     /locus_tag="ACJJDE_001331"
     CDS             complement(2757..3257)
                     /locus_tag="ACJJDE_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpH family outer membrane protein"
                     /protein_id="HGG7541251.1"
                     /translation="MTRLTRAFAAALIGLCCTAGAHADTFQKIGFINTERIYLESKQA
                     RKIQKTLDSEFSARQDELQKLQREGLDLERQLAEGKLRNAKKAQAEEKWRGLVAAFRK
                     KQAQFEEDYNLRRNEEFASLQQNANRVIVKIAKQEGYDVILQNVIYVNTQYDVTDSVI
                     KEMNAR"
     gene            complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACJJDE_001332"
     CDS             complement(3323..5716)
                     /gene="bamA"
                     /locus_tag="ACJJDE_001332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_process: GO:0071709 - membrane assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HGG7541252.1"
                     /translation="MKLKQIASALMVLGISPLALADFTIQDIRVEGLQRTEPSTVFNY
                     LPVKVGDTYNDTHGSAIIKSLYATGFFDDVRVETADGQLLLTVIERPTIGSLNITGAK
                     MLQNDAIKKNLESFGLAQSQYFNQATLNQAVAGLKEEYLGRGKLNIQITPKVTKLARN
                     RVDIDITIDEGKSAKITDIEFEGNQVYSDRKLMRQMSLTEGGIWTWLTRSNQFNEQKF
                     AQDMEKVTDFYQNNGYFDFRILDTDIQTNEDKTKQTIKITVHEGGRFRWGKVSIEGDT
                     NEVPKAELEKLLTMKPGKWYERQQMTAVLGEIQNRMGSAGYAYSEISVQPLPNAETKT
                     VDFVLHIEPGRKIYVNEIHITGNNKTRDEVVRRELRQMESAPYDTSKLQRSKERVELL
                     GYFDNVQFDAVPLAGTPDKVDLNMSLTERSTGSLDLSAGWVQDTGLVMSAGVSQDNLF
                     GTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDVYGKAFDPRKASTSIKQYKT
                     TTAGAGIRMSVPVTEYDRVNFGLVAEHLTVNTYNKAPKHYADFIKKYGKTDGTDGSFK
                     GWLYKGTVGWGRNKTDSALWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWFFPLSKT
                     FTLMFGGEVGIAGGYGKTKEIPFFENFYGGGLGSVRGYESGTLGPKVYDEYGEKISYG
                     GNKKANVSAELLFPMPGAKDARTVRLSLFADAGSVWDGKTYDDNSSSATGGRVQNIYG
                     AGNTHKSTFTNELRYSAGGAVTWLSPLGPMKFSYAYPLKKKPEDEIQRFQFQLGTTF"
     gene            complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACJJDE_001333"
     CDS             complement(5773..7113)
                     /gene="rseP"
                     /locus_tag="ACJJDE_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HGG7541253.1"
                     /translation="MHTLLAFIFAILILVSLHEFGHYIVARLCGVKVVRFSVGFGKPF
                     FTRKRGDTEWCLAPIPLGGYVKMVDTREGEVSEADLPYAFDKQHPAKRIAIVAAGPLT
                     NLALAVLLYGLSFSFGVTELRPYVGTVEPDTIAARAGFQSGDKIQSVNGTPVADWGSA
                     QTEIVLNLEAGKVAVGVQTASGAQTVRTIDAAGTPEAGKIAKNQGYIGLMPFKITTVA
                     GGVEKGSPAEKAGLKPGDRLTAADGKPITSWQEWANLTRQSPGKKITLNYERAGQTHT
                     ADIRPDTVEQPDHTLIGRVGLRPQPDRAWDAQIRRSYRPSVVRAFGMGWEKTVSHSWT
                     TLKFFGKLISGNASVSHISGPLTIADIAGQSAELGLQSYLEFLALVSISLGVLNLLPV
                     PVLDGGHLVFYTAEWIRGKPLGERVQNIGLRFGLALMMLMMAVAFFNDVTRLLG"
     gene            complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACJJDE_001334"
     CDS             complement(7148..8383)
                     /gene="ispC"
                     /locus_tag="ACJJDE_001334"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HGG7541254.1"
                     /translation="MPSENASDGIRYKVIPIMTPQVLTILGSTGSIGESTLDVVSRHP
                     EKFRVFALAGHKQVEKLAVQCRTFRPEYAVVADAEHAARLEALLKGDGTATQVLHGAQ
                     ALVDVASADEVSGVMCAIVGAVGLPSALAAAQKGKTIYLANKETLVVSGALFMETARA
                     NGAAVLPVDSEHNAIFQVLPRDYAGRLNEHGIASIILTASGGPFLTADLNTFDSITPA
                     QAVKHPNWSMGRKISVDSATMMNKGLELIEAHWLFNCPPDKLEVVIHPQSVIHSMVRY
                     RDGSVLAQLGNPDMRTPIAYCLGLPERIDSGVGDLDFDALSALTFQKPDFDRFPCLKL
                     AYEAMNAGGAAPCVLNAANEAAVAAFLDGQIKFTDIAKTVAHCLSQDFSDGIGDIGGL
                     LAQDARTRAQARAFIGTLR"
     gene            complement(8388..9185)
                     /locus_tag="ACJJDE_001335"
     CDS             complement(8388..9185)
                     /locus_tag="ACJJDE_001335"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004605 - phosphatidate
                     cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0016024 - CDP-diacylglycerol biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HGG7541255.1"
                     /translation="MLKQRVITAMWLLPLMLGMLFYAPQWLWAAFCGLIALIALWEYA
                     RMSGLCKIKTNHYLAATLVFGVVAYAGGWMLPNLVWYVVLAFWLAIMPLWLRFKWRLN
                     GGWQVYAVGWLLVMPFWFALVSLRPHPDDALPLLAVIGLVWVADVCAYFSGKAFGKHK
                     IAPAISPGKSWEGAIGGAVCVAVYMTAVRSAGWLAFDTGWFDTVLIGLVLTVVSVCGD
                     LLESWLKRAAGIKDSSNLLPGHGGVFDRTDSLIAVISVYAAMMSVLN"
     gene            complement(9188..9934)
                     /locus_tag="ACJJDE_001336"
     CDS             complement(9188..9934)
                     /locus_tag="ACJJDE_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HGG7541256.1"
                     /translation="MKSSTQAVLEHTAIPKHIAVIMDGNGRWAKKRFLPRIMGHKRGL
                     DALENMVKHCAKLGVQYLTVFAFSTENWRRPEDEVSFLMGLFLQALQKQVRRLHENNM
                     RLKILGSRERFNRQILQGIEEAEALTANNTGLTLSIAADYGGRWDILQAANKLIAEGV
                     SEITEDTLAKHLMLGDAPEPDLFIRTGGETRISNFLLWQMAYAELYFTDILWPDFDGK
                     ALDDAVASFQKRERRFGRTSEQLPIEQQRN"
     gene            complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACJJDE_001337"
     CDS             complement(9990..10547)
                     /gene="frr"
                     /locus_tag="ACJJDE_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HGG7541257.1"
                     /translation="MINDIQKTAEGKMQRSVEVLKENLAKVRTGRAHTGLLDQVEVEY
                     WGSMVPVSQVANVTLLDARTIGVKPFEGNMAAKVEKAIRDSNLGLNPAAVGDLIRVPM
                     PMLTEERRKDLIKVVRGEAEEGRVSIRNVRRDANDHIKKLLKDKEISEDEARRGEEAV
                     QKLTDKYITEADKLLTAKEEDLMAI"
     gene            complement(10728..11855)
                     /locus_tag="ACJJDE_001338"
     CDS             complement(10728..11855)
                     /locus_tag="ACJJDE_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HGG7541258.1"
                     /translation="MNTSQRNRLVSRWLNSYERYRYRRLIHAVRLGGAVLFATASARL
                     LHLQHGEWIGMTVFVVLGMLQFQGAIYSKAVERMLGTVIGLGAGLGVLWLNQHYFHGN
                     LLFYLTVGTASALAGWAAVGKNGYVPMLAGLTMCMLIGDNGSEWFDSGLMRAMNVLIG
                     AAIAIAAAKLLPLKSTLMWRFMLADNLTDCSKMIAEISNGRRMTRERLEQNMVKMRQI
                     NARMVKSRSHLAATSGESRISPAMMEAMQHAHRKIVNTTELLLTTAAKLQSPKLNGSE
                     IRLLDRHFTLLQTDLQQTVALINGRHARRIRIDTAINPELEALAEHLHYQWQGFLWLS
                     TNMRQEISALVILLQRTRRKWLDAHERQHLRQSLLETREHG"
     gene            complement(11931..12006)
                     /locus_tag="ACJJDE_001339"
     tRNA            complement(11931..12006)
                     /locus_tag="ACJJDE_001339"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11971..11973),aa:Thr,seq:cgt)
BASE COUNT         2275 a         3083 c         3761 g         2957 t
ORIGIN      
        1 tttaaaacac cacttttgta gtgtccagta atttcagcac agaatattca ataagacaat
       61 atgttctttt gaaaaatact tttggttttt tcgccgaaag caggtcggtt caagctgcgg
      121 aaattgtttg caattcttta aaagcagcgg cggaggtcac aatgaaatgt ccgaatgggg
      181 atgtggtcgg cggcagaaat catcaatgct gccgactgcc atacttctga aatctacaaa
      241 atgatgcatc gatcaaacaa tataccgctt taaaaaaacc gatgccgtct gaaacgcttt
      301 cggggtttca gacggcatca aaagggtacg gtcagcggat gatgccgcgc gccgattgtg
      361 cgaaaaagtc tcggaatacg gcaagctcgg cttgggtttc ggcgcggcgg aggatgtctg
      421 ccttggcctc ttcaaacgga atgccgcgat ggtagagggt tttgtacacg tctttgacgg
      481 cggaaatctg ttctgcggta aaaccgttgc ggcgcatgcc ttcgctgttg agccccgccg
      541 gttcggcgcg gtagcccgat gccataaagt agggcggtac gtctttgtgt acgcctgcgg
      601 cgaaggcggt catggcgtag tcgccgatgt ggcagaattg gaaaaccagc gtgtagccgc
      661 ccaaaacgac gtagtcgccg atggtaacgt gtccggcaag cgaggcgttg ttggcgaaga
      721 tggtgtggtt gccgatgacg cagtcgtgcg cgaggtggca gtacgccata atccagttgt
      781 cgtcgccgat acgggtttcg ccgatgccgg ttaccgtgcc taaattaaag gtggtgaatt
      841 cgcggatggt gttgccgttg ccgataatca gcttggtcgg ctcgtcgcgg tattttttgt
      901 cctgcgggat ttcgccgagg ctggcaaatt ggaaaatgcg gttgttttcg ccgatgctgg
      961 tgtggccgtt gatgacggcg tgcggaccga tttcggtatt cgcgccgatt tggacgttgg
     1021 ggccgataac ggtgtacgcg ccgactttga cgccggagtc gagttcggct ttggggtcga
     1081 tgacggcggt cgggtggatg agggtcatgt ttttcctttc ctgtcgtgtt gccgcgaaga
     1141 tgcgcgacgg caacaggttg tctgaaaact ttcagacgac ctttttctga acactcaaac
     1201 tacgcgtttg gcacacatga tgatggcttc gacggcaact tgcccgtcca ctttggcgac
     1261 ggcgttgaat ttgccgatgc cgcgccgact ggtcagcagc tcgacttcaa agacgagttg
     1321 gtcgccgggg atgacttggc gtttgaaacg ggcttcgtct atgccggcga agaagaagaa
     1381 ttcgttttct ttgcgcccgc cttcgctcaa aatcgccaac gtgccgcacg cctgcgccat
     1441 cgcttcgatg atgagtacgc cgggcatcac gggcaggtcg ggaaaatggc cttggaactg
     1501 gggttcgttt atggtgacgt ttttaatcgc ggtcagggtt ttcatcggct cgaaggcggt
     1561 gatgcggtcg agctggagaa acggatagcg gtgggggatg agtttttgga tgtctttggc
     1621 ttcgatgggg agttgtacgt ccatgtctgt cgtattcctt gaataaagtc ggtttggtta
     1681 tttgctgtct tgaccggcat ctgaaagctg ctgctccagt gttttgagcc gtttgttcat
     1741 ttcgcttaag cggtggatgt aaacagcgtt gcgcgcccat tctttatggg tggacatcgg
     1801 gaagatgccg gcgaggtgtt tgccgctttc ggtaatgctg tgggtgacgg acgtgccgcc
     1861 gccgatggtg gttttgtcgg cgatttcgat gtgtccgacc gtaccgacgc cgccgccgat
     1921 gatgcagtag ctgcctatgg ttacgctgcc tgagatgccg gttttggcgg cgatgacggt
     1981 gtgcgaaccg attttgcagt tgtgtccgat ttggacttgg ttgtcgattt tggtgccgtt
     2041 gccgacggtg gtgtcgctca tcgcgccgcg gtcgatgttg gtgttcgagc cgatttctac
     2101 gtcgttgccc agcgttaccg cgccggtttg cgggatttta aaccatgaat cgccggcaaa
     2161 agcgagtccg aaaccgtccg cgccgatgac cgcgccgctg tggatttcga cgcgtctgcc
     2221 cagtgtgcag ccgtaataaa cgacggcgtt gggatgcagg acgacttcgt cgcccagttt
     2281 gcaatcgtgt tggacgacgg cgtttgccaa gatgcggcag ccttcgccga gcacggtgtt
     2341 tgcgccgatg tagacgttcg cgccgatttc gcagctggcg ggaacggtcg cgcccggttc
     2401 gacgacggcg gtcggatgga tgccgccgcg cgctttgacg acgggtgaaa acaggcgggc
     2461 gactttggcg aaatagagat aggggtcgtc ggcgacaatc aggttgcgcc cttcaaatcc
     2521 gtctgccgct ttggcggaaa cgatgaccgc gcccgcgctg ctgtcgtgga cttcggcttt
     2581 gtatttcgga ttggcaagga agctgatgtg ttccgcctgc gcgtctgcga gcgggcgcac
     2641 ggcggtaacg gaaatgtcct cgccgcgcca ttcgccgccg agccgcgcgg tgatttggga
     2701 cagggtgtag gtggccggaa tcatggtttt cctgttcggt atgccgtctg aaagggtcag
     2761 cgggcgttca tttctttaat gacgctgtcg gtaacgtcgt attgggtgtt gacgtaaatc
     2821 acgttctgca aaatgacatc gtaaccttcc tgtttggcga ttttgacgat gacgcggttg
     2881 gcgttttgct ggagggaggc aaactcttcg ttgcggcgga ggttgtagtc ttcttcaaac
     2941 tgcgcctgtt ttttgcggaa cgctgcgacc agcccgcgcc atttttcttc ggcttgcgcc
     3001 ttttttgcgt ttctgagttt gccttcggca agctgccttt ccaaatccag accttcgcgt
     3061 tgcagttttt gcaattcgtc ctgacgggcg gaaaattcgc tgtccagcgt tttttgaatc
     3121 ttgcgcgcct gcttggattc gaggtagatg cgctcggtgt tgataaagcc gattttttgg
     3181 aaggtgtcgg cgtgcgcgcc tgcggtgcag cacaaaccga tcagagccgc ggcaaacgcg
     3241 cgggtcaaac gggtcatggt aaaactcctt cgaatgttgc cgcgaaatgc cgtctgaagg
     3301 gcttcagacg gcatttgcgg gattagaacg tcgtgccgag ttggaattgg aagcgttgga
     3361 tttcgtcttc cggttttttc ttcagcgggt aggcgtagct gaatttcatc gggcctaaag
     3421 gcgagagcca ggtaaccgcg ccgccggcgg aatagcgcaa ttcgttggta aaggtggatt
     3481 tatgggtatt gccggcgccg taaatgtttt gaaccctgcc gccggtcgcg gaactgctgt
     3541 tgtcgtcgta ggttttgccg tcccacacgc tgcctgcgtc ggcaaacagg ctcaggcgga
     3601 cggtgcgcgc gtctttcgcg ccgggcatcg ggaagagcag ctcggcggag acgttggctt
     3661 ttttgttgcc gccgtagctg attttttcgc cgtattcgtc atacactttc ggaccgagcg
     3721 tgccgctttc gtatccgcgc accgaaccca ggccgccgcc gtagaagttt tcaaagaagg
     3781 ggatttcttt ggttttgccg tagccgcccg caatgccgac ttcgccgccg aacatcagcg
     3841 tgaaggtttt gcttaagggg aagaaccagg tttggttgtg ggtggcggag tagtattgca
     3901 gtttgctgcc gggcagggcg atttcagcgt tcacgcccgt caggtagccg cgcgtcggcc
     3961 ataacgcgct gtcggttttg ttgcgccccc agccgacggt acctttgtac agccagcctt
     4021 tgaagctgcc gtctgtgccg tcggttttgc cgtatttctt gataaagtcg gcatagtgtt
     4081 tgggcgcttt gttgtaggtg ttgacggtca ggtgttctgc caccaaaccg aaattcacgc
     4141 ggtcgtattc ggtaacaggc acgctcatgc ggatgcctgc gcctgccgtg gtggttttat
     4201 attgtttgat gctggtcgat gctttgcgcg ggtcgaaggc ttttccgtaa acatcgtagc
     4261 ctaggctgac cccgtctgcc gtgaagtacg ggtcggtaaa cgacagcgag ccgttgagcg
     4321 tggttttgct tcgtgaggcg cgcagggcgg ccgacttgcc cgtaccgaac aggttgtctt
     4381 gggaaacgcc tgcggacatg accaggccgg tatcctgtac ccagcccgcg ctcaagtcga
     4441 gcgagccggt ggaacgttcg gtcaggctca tgttcaaatc gactttgtcg ggtgtgccgg
     4501 caagcgggac ggcatcaaac tgtacgttgt cgaagtagcc caaaagctcg acgcgctctt
     4561 tggagcgttg cagcttggag gtgtcgtaag gcgcggattc catttggcgc aattcgcggc
     4621 gcacgacttc gtcgcgggtt ttgttgttgc cggtgatgtg gatttcgttg acgtagattt
     4681 tccggcccgg ttcgatgtgc aggacgaaat cgacggtttt ggtttcggcg tttggcagcg
     4741 gctgtacgct gatttcgctg tatgcgtagc ctgccgagcc catgcggttc tgaatctcac
     4801 ccaaaacggc ggtcatctgc tggcgttcgt accatttgcc gggcttcatg gtcagcagtt
     4861 tttccagttc ggctttgggg acttcgttgg tgtcgccttc gatggagact ttgccccaac
     4921 ggaaacgtcc gccttcgtgg acggtgattt tgatggtctg cttggttttg tcttcgttgg
     4981 tttggatgtc ggtatcgagg atgcggaaat cgaagtagcc gttgttctgg tagaagtcgg
     5041 ttactttttc catgtcttgg gcaaatttct gctcgttgaa ttggttgctt cgtgtcagcc
     5101 atgtccaaat gccgccttcg gtcagcgaca tctgccgcat cagtttgcgg tcggaataga
     5161 cttggttgcc ttcaaattcg atgtcggtga ttttggcgga tttgccctcg tcaatcgtga
     5221 tgtcgatgtc gacgcggttg cgggcgagtt tggttacttt gggcgtgatt tggatattga
     5281 gtttgccgcg cccgaggtat tcttctttca ggccggcgac tgcctgattg agtgtcgcct
     5341 gattaaagta ttgcgactgc gccagcccga acgattcgag gtttttctta atggcgtcgt
     5401 tttgcagcat ttttgcgccg gtgatgttga gcgagccgat ggtggggcgt tcgataacgg
     5461 tcagcaggag ctgcccgtcc gcagtttcga cgcgtacgtc gtcaaagaaa ccggtggcgt
     5521 acaggctttt gatgatggca ctgccgtgtg tgtcgttgta ggtgtcgccg actttgacgg
     5581 gcaggtagtt gaatacggta ctcggctcgg tacgctgcaa gccttcgacg cggatgtctt
     5641 ggatggtgaa gtcggcaagt gccaaaggcg atatgcccaa gaccatcagt gcggaagcaa
     5701 tctgtttcag tttcattgtc agttccttgt ggtgcggaat gcggtttcag acggcattcc
     5761 gaaacgtaaa atctaaccga gcagccgggt aacgtcgttg aagaaggcga ccgccatcat
     5821 cagcatcatg agggcaagcc cgaagcgcaa accgatgttt tggacgcgtt cgcccaaagg
     5881 tttgccgcgt atccattcgg cagtataaaa cacgaggtgg ccgccgtcca aaacggggac
     5941 gggcagtagg ttcagcacgc cgaggctgat gctgaccagt gccaaaaatt ccaaataact
     6001 ttgcaagccg agttcggcgg actgtccggc aatgtcggca atggtcagcg gcccggaaat
     6061 atggctgacg gaggcgttgc cgctgattag tttgccgaaa aatttgaggg ttgtccacga
     6121 gtgggaaacg gttttttccc agcccatgcc gaatgcgcgg acaacagacg gacggtagct
     6181 gcggcggatt tgcgcgtccc acgccctgtc cggctgcgga cggaggccga cgcgcccgat
     6241 cagggtgtgg tcgggctgtt cgacagtatc ggggcggatg tcggcggtat gggtttgtcc
     6301 ggcgcgttcg tagttcaggg tgattttttt gccggggctt tggcgggtca ggtttgccca
     6361 ttcttgccat gaggtaatgg gtttgccgtc ggcggcagtc agcctgtcgc ccggtttcag
     6421 gcctgctttt tcggcggggc tgcctttttc cacgccaccg gcaacggttg tgattttaaa
     6481 gggcatcagt ccgatgtagc cttggttttt tgcgatttta ccggcttccg gcgtgcctgc
     6541 ggcatcgatg gtgcggacgg tttgcgcgcc tgatgccgtc tgaacgccga cggcgacttt
     6601 gccggcttcg aggttgagga cgatttcggt ttgcgcgctg ccccaatctg caacgggtgt
     6661 gccgttgacg gattgtattt tgtcgccgct ttggaagccg gcgcgggcgg caatggtgtc
     6721 gggttcgact gtgccgacat aggggcgcag ttcggttacg ccgaaggaaa agctcagtcc
     6781 gtacagcaaa accgccagtg cgagattggt cagcgggccg gcggcgacga tggcgatgcg
     6841 tttggcgggg tgttgtttgt caaaagcgta gggtaaatcg gcttctgata cttcgccttc
     6901 gcgcgtatcg accattttga cgtaaccgcc caacggaatc ggggcgaggc accattcggt
     6961 gtcgccgcgc tttcgggtga aaaacggttt gccgaagccg acggaaaagc gtacgacttt
     7021 gacgccgcac aatctggcaa cgatgtagtg tccgaactcg tgcaggctga ccaaaatcag
     7081 gatggcgaag ataaaagcta gaagggtgtg caaatggttt tcctttgata acggtgttca
     7141 gacggcatca gcgcagtgtg ccgataaatg cccgcgcttg tgcgcgtgtc cgggcatctt
     7201 gcgccaagag cccccctatg tcgcctatgc cgtctgaaaa gtcttgtgaa agacaatggg
     7261 cgacggtttt ggcaatgtcg gtaaacttaa tctgtccgtc caaaaaggcg gcgacggcgg
     7321 cttcgttggc ggcgttcaat acgcagggcg cggctccgcc tgcgttcatg gcttcatagg
     7381 cgagcttcag gcaggggaag cggtcaaagt cgggcttttg gaaggtcagc gcggacaatg
     7441 cgtcgaaatc caggtcgccg acacccgaat cgatgcgctc gggcaaaccc aaacaataag
     7501 caatgggcgt acgcatatcg ggattgccca gttgcgccaa cacggagccg tcgcggtagc
     7561 gcaccatgct gtgtatcacg gattgcggat ggatgacgac ttcgagcttg tcaggcggac
     7621 agttgaacag ccaatgcgct tcaatcagct ccaaaccttt gttcatcatg gtggcggaat
     7681 cgacggagat tttgcgcccc atgctccaat tggggtgttt gaccgcttgg gcgggcgtaa
     7741 tgctgtcgaa cgtgtttaaa tcggcggtca gaaacgggcc gccggaagcg gtcaggataa
     7801 tcgaagcgat gccgtgttcg ttcagacggc cggcgtaatc gcgcggcaaa acttggaaaa
     7861 tggcgttgtg ttcgctgtcg acgggcagca ctgccgcgcc gtttgcacgg gcggtttcca
     7921 taaacaacgc gccggaaacc accagcgtct ctttgttcgc cagataaatg gttttgcctt
     7981 tttgcgccgc tgcgagcgcg gaaggcagcc ccaccgcccc gacgatggcg cacatgacac
     8041 cgctgacttc gtcggcagag gcaacgtcaa ccaatgcctg cgcgccgtgt aaaacctgcg
     8101 tcgccgtgcc gtcgcctttc aacaaagctt caagccgggc ggcgtgttcg gcatcggcaa
     8161 cgacggcata ttcggggcgg aacgtccggc attgcaccgc cagtttctcg acctgcttat
     8221 gccctgccag cgcgaatacg cggaattttt cggggtggcg ggagacaacg tccagcgtgc
     8281 tttcgcctat gctgccggta ctgcctaata tggtcaggac ttgtggtgtc ataatgggga
     8341 taactttata ccggatgccg tctgaagcgt tttcagacgg catagaatca atttaaaacc
     8401 gacatcatcg ccgcatagac gctgataacg gcaatcaggc tgtcggtacg gtcgaacacg
     8461 ccgccgtgtc cgggcagcag gttgctgctg tctttgatgc ctgccgcgcg cttgagccag
     8521 ctttccaaaa ggtcgccgca tacgctgaca acggtcaaca ccaaaccgat taacacggta
     8581 tcgaaccagc ctgtatcgaa tgccagccag ccggcacttc gtacggcggt catgtacacg
     8641 gccacgcaaa ccgcgccgcc gattgcgcct tcccagcttt tgccagggct gattgccggt
     8701 gcgattttgt gtttaccgaa cgccttgccg ctgaaatacg cgcaaacgtc ggcaacccag
     8761 accagaccta tcacggcgag cagcggcagg gcatcatcgg gatgcgggcg cagggatacg
     8821 agcgcgaacc aaaacggcat gaccagaagc caaccgacgg cataaacctg ccaaccgccg
     8881 ttgagcctcc atttgaatct caaccataaa ggcatgatgg cgagccaaaa tgccaaaaca
     8941 acataccaaa ccaaattagg cagcatccag ccgcccgcat aggcaaccac gccgaaaacc
     9001 aaggttgcgg cgaggtaatg gttggtttta attttgcaca aaccgctcat acgggcatat
     9061 tcccacaagg caatcagggc aatcagtccg caaaatgcag cccacaacca ttgcggcgcg
     9121 taaaacagca tgcccagcat cagcggcagc agccacatag cagttatcac ccgttgtttc
     9181 agcatattca gttcctttgc tgttcgatag gcagttgctc ggaggtgcgt ccgaaccgcc
     9241 gttcgcgttt ttggaacgaa gcgacggcat cgtccaaagc cttgccgtca aaatcgggcc
     9301 acaaaatatc ggtgaaatac agttctgcat atgccatctg ccagagcagg aaattgctga
     9361 tgcgcgtttc gccgccggtg cggatgaaca aatccggttc cggtgcatcg cccagcatca
     9421 agtgtttcgc cagcgtgtct tccgtaatct cggatacgcc ttcggcaatc agtttgtttg
     9481 ccgcctgcaa aatatcccaa cgtccgccgt aatcggcggc aatgctcagg gtcaggccgg
     9541 tattgtttgc cgtcaaggct tccgcctctt cgatgccttg cagaatctgc cgattaaagc
     9601 gttcgcggct gcccagtatt tttaggcgca tattgttttc gtgcagacgg cgtacctgtt
     9661 tttgcaaagc ctgtaaaaac agccccatca ggaacgaaac ttcgtcttcg gggcggcgcc
     9721 agttttcggt tgaaaaggca aacacggtca gatattgcac acccagtttg gcgcaatgct
     9781 tcaccatatt ttccaatgcg tccaaaccgc gtttgtgtcc cattatgcgc gggaggaaac
     9841 gttttttcgc ccaacggccg ttgccgtcca taatcacggc gatatgcttg ggaatggcgg
     9901 tgtgttccaa aacggcctgc gtgctgcttt tcatgtctgc ctttcgcggt tcggcattca
     9961 aatgccgtct gaacgccgaa ccgtgcaggt taaattgcca tcaaatcttc ttctttggca
    10021 gtcaggagtt tgtcggcttc ggtaatgtat ttgtcggtca gtttttgaac cgcttcttcg
    10081 ccgcgacgtg cctcgtcttc ggaaatttct ttgtctttga ggagtttttt gatgtggtcg
    10141 ttggcatcgc ggcgcacgtt gcggatagag acgcggcctt cttccgcttc gccgcgtacg
    10201 actttaatca ggtctttgcg gcgttcctcg gtcagcatgg gcatcggcac gcggatcagg
    10261 tcgccgacag ctgccgggtt cagccccaag tttgaatcgc ggatggcttt ctcgactttg
    10321 gccgccatat tgccctcaaa cggtttcacg ccgatggtgc gcgcgtccag aagcgttacg
    10381 ttggcaactt ggctgacggg gaccatgctg ccccagtatt cgacttccac ttggtcgagc
    10441 aggccggtat gcgcgcggcc ggtacgcact ttcgccagat tttctttcag tacttcgacc
    10501 gaacgctgca ttttgccttc ggctgttttt tgaatatcgt tgatcatatt gttctttcgg
    10561 tgggataagg tgggcgggca gccgtctgaa acgcgcttca aacctttcag acggcatgaa
    10621 aactgttaac tgcgaatagt accgttattc gggcatgacg acaaggcagg aggattggag
    10681 atgccgtctg aagcggcagg cgtttcagac ggcatcgtgt ccgaccgtca gccgtgttcc
    10741 cgtgtttcaa gcaggctttg gcgcaggtgt tggcgttcgt gggcatccag ccatttgcgg
    10801 cgggtgcgtt gcagcaggat gacgagggcg gaaatttcct gacgcatatt ggtgctgagc
    10861 cagaggaagc cctgccattg gtagtggagg tgttcggcga gggcttccag ttcggggttg
    10921 atggcggtgt cgatgcggat gcggcgggcg tgtctgccgt tgataagggc gacggtttgt
    10981 tgcaggtcgg tttggagcag tgtgaagtgg cggtcgagca gccggatttc gctgccgttg
    11041 agtttgggag attgcagctt ggcggcagtg gtcaggagca gctcggtggt gttgacaatt
    11101 ttacggtggg cgtgctgcat ggcttccatc atggcggggc tgatgcggct ttcgcccgat
    11161 gtggcggcga ggtggctgcg gcttttgacc atgcgtgcgt tgatttggcg cattttaacc
    11221 atattctgct ccaaacgttc gcgcgtcata cgcctgccgt tgctgatttc ggcaatcatt
    11281 ttgctgcagt cggtcaggtt gtcggcaagc atgaaacgcc acatcagtgt ggatttcagc
    11341 ggcagcagtt tggcggcggc aatggcgatg gccgcgccga tgaggacgtt catggcgcgc
    11401 atcaggccgc tgtcgaacca ttcgctgccg ttgtcgccga tgagcatgca catcgtcagc
    11461 cccgccagca tagggacgta gccgtttttg ccgaccgccg cccagccggc cagtgcgctt
    11521 gccgtgccga cggtgaggta gaagaggagg ttgccgtgga aataatgctg gttcagccat
    11581 aaaacgccca aacccgcgcc cagcccgatg accgtgccga gcatacgttc caccgccttg
    11641 gagtaaatcg ccccttgaaa ctggagcatg ccgaggacga cgaagacggt catccctatc
    11701 cactcgccgt gttggaggtg gagcagccgg gcggaggcgg tggcgaacag gacggccccg
    11761 ccgagccgga cggcgtggat gaggcggcgg tagcggtagc gttcgtagga gttgagccag
    11821 cggctgacga ggcggttgcg ttgcgaggtg ttcatatcgg ttgtgccgtc tgaagcggaa
    11881 atgtgaaaaa gcacaggctt cccgaggaag ggagggtctg tgcttggtat tggtgccgga
    11941 gaagggaatc gaacccccga ccttcgcgtt acgaatgcgc tgctctaccg actgagctac
    12001 accggcgttt tttcgtcatg atatatatga acggttgttt gtgcaacttt tcgggcgggc
    12061 ggcaaggcag tgcgcg
//
LOCUS       DBBZXU010000058        11745 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.058, whole genome shotgun sequence.
ACCESSION   DBBZXU010000058 DBBZXU010000000
VERSION     DBBZXU010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11745)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11745)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11745
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.058"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(354..776)
                     /locus_tag="ACJJDE_001340"
     CDS             complement(354..776)
                     /locus_tag="ACJJDE_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HGG7541259.1"
                     /translation="MQVTSKWIDGMCFVGTTEGGHSVVMEGSAAEGKAKRGPSPLEML
                     LLGVAGCSSIDVVMIAEKQRQKVTDCRATVTAKRADDAPRVFTEIHIHFKVFGHDLKE
                     SAIERAVQMSAEKYCSASIMLGKAAKITHSFEIAGADK"
     gene            complement(894..1565)
                     /locus_tag="ACJJDE_001341"
     CDS             complement(894..1565)
                     /locus_tag="ACJJDE_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HGG7541260.1"
                     /translation="MMKTFKNIFSAAILSAALPCAYAAGLPQSAVLHYSGSYGIPATM
                     TFERSGNAYKIVSTIKVPLYNIRFESGGTVVGNTLHPTYYRDIRRGKLYAEAKFADGS
                     VTYGKAGESKTEQSPKAMDLFTLAWQLAANDAKLPPGLKITNGKKLYSVGGLNKAGTG
                     KYSIGGVETEVVKYRVWRGDDTVMYFFAPSLNNIPAQIGYTDDGKTYTLKLKSVQING
                     RAAKP"
     gene            complement(1581..2207)
                     /gene="purN"
                     /locus_tag="ACJJDE_001342"
     CDS             complement(1581..2207)
                     /gene="purN"
                     /locus_tag="ACJJDE_001342"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HGG7541261.1"
                     /translation="MKNIVILISGRGSNMQAIVNAAIPNVRIAAVLSNSETAAGLQWA
                     AERGIPTDSLNHKNFESRLAFDTAMMEKIDAYQPDLVVLAGFMRILTPEFCAHYEGRL
                     MNIHPSILPSFTGLHTHERALEAGCRVAGCTIHFVTAELDCGPIVSQGIVPILDGDTA
                     DDIAARVLAVEHKLYPKAVADFAAGRLIIEGNRVRNSENADAARFLTA"
     gene            complement(2314..3132)
                     /locus_tag="ACJJDE_001343"
     CDS             complement(2314..3132)
                     /locus_tag="ACJJDE_001343"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7541262.1"
                     /translation="MNTIFKISALTLSAALALSACGKKEAAPASASEPAAASSAQGDT
                     SSIGSTMQQASYAMGVDIGRSLKQMKEQGAEIDLKVFTEAMQAVYDGKEIKMTEEQAQ
                     EVMMKFLQEQQAKAVEKHKADAKANKEKGEAFLKENAAKDGVKTTASGLQYKITKQGE
                     GKQPTKDDIVTVEYEGRLIDGTVFDSSKANGGTVTFPLSQVIPGWTEGVQLLKEGGEA
                     TFYIPSNLAYREQGAGDKIGPNATLVFDVKLVKIGAPENAPAKQPAQVDIKKVN"
     gene            complement(3391..3831)
                     /locus_tag="ACJJDE_001344"
     CDS             complement(3391..3831)
                     /locus_tag="ACJJDE_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HGG7541263.1"
                     /translation="MPKATFYTHVAQVPIFTCRLIARAIRDGGRILVWSDSFGQLQEL
                     DKMLWQYEAESFIPHEIWETEEAMPSETSVLLACGGNLPRIPEGMTVLNLSDGFWNTA
                     PVLPARVLEIVGNSLEDLADARERFTAYRRSGFAIEHHGMEGKA"
     gene            complement(3894..5300)
                     /locus_tag="ACJJDE_001345"
     CDS             complement(3894..5300)
                     /locus_tag="ACJJDE_001345"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0019538 - protein metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HGG7541264.1"
                     /translation="MEFSTKTEILQEQQAGAQLFVCTEEAQLNHPTALALLSSLEEGQ
                     NFADTKIPTGNGLQAVAVCCLKSTGRAALNKAAAEAAKWAQNQETVNVDIHAFDEAQA
                     AAVAEAFAIAFGNAAYRFDRYKKEAKPAKFETAVFHSAHEAAVKEALRVAEAQVYGQS
                     LCRDLGNAAPNECTPEFLARTAKAEAEKLGAHAKIIEKDYIKENMGSFWSVAKGSAEA
                     PYLVELSYFGAADKEAALVVLVGKGITFDTGGISLKPGLNMDEMKFDMCGAATVISTF
                     CAAVKLQLPINLIAVVATCENMPSGAANKPGDVVKSMKGLTIEVLNTDAEGRLILCDA
                     LTYAEQFKPKAVIDVATLTGACIVALGHDVSGVMGNNQDLIDSLLAASYNVDDKAWQL
                     PLFETYKDQLKSNFADIPNIGTPGAGTITAATFLSYFTEDYPWAHLDIAGTAWKSGAE
                     KGATGRPVPLLLNYLRNL"
     gene            5471..6586
                     /gene="lptF"
                     /locus_tag="ACJJDE_001346"
     CDS             5471..6586
                     /gene="lptF"
                     /locus_tag="ACJJDE_001346"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HGG7541265.1"
                     /translation="MIYQRNLIKELSFTAVGIFVVLLAVLVSTQAINLLGRAADGRVA
                     IDAVLALVGFWVIGMTPLLLVLTAFISTLTVLTRYWRNSEMSVWLSCGLALKQWIRPV
                     MQFAVPFAVLVAVMQLWVIPWAELRSREYAEILKQKQELSLVEAGEFNSLGKRNGRVY
                     FVETFDTESGIMKNLFLREQDKNGGDNIIFAKEGNFSLNDNKRTLELRHGYRYSGTPG
                     RADYNQVSFQKLSLIISTTPKLIDPVSHRRTIPTAQLIGSSNPQHQAELMWRISLTVS
                     VLLLCLLAVPLSYFNPRSGHTYNILIAIGLFLVYQNGLTLLFEAVEDGKIHFWLGLLP
                     MHIIMFVIAIVLLRVRSMPSQPFWQAVDKSLTLKGGK"
     gene            6583..7653
                     /gene="lptG"
                     /locus_tag="ACJJDE_001347"
     CDS             6583..7653
                     /gene="lptG"
                     /locus_tag="ACJJDE_001347"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010358669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HGG7541266.1"
                     /translation="MNLISRYIIRQMAVMAVYALLAFLALYSFFEILYETGNLGKGSY
                     GIWEMLGYTALKMPARAYELMPLAVLIGGLVSLSQLAAGSELTVIKASGMSTKKLLLI
                     LSQFGFIFAIATVALGEWVAPTLSQKAENIKAAAINGKISTGNTGLWLKEKNSIINVR
                     EMLPDHTLLGIKIWARNDKNELAEAVEADSAVLNSDGSWQLKNIRRSTLGEDKVEVSI
                     AAEENWPISVKRNLMDVLLVKPDQMSVGELTTYIRHLQNNSQNTRIYAIAWWRKLVYP
                     AAAWVMALVAFAFTPQTTRHGNMGLKLFGGICLGLLFHLAGRLFGFTSQLYGIPPFLA
                     GALPTIAFALLAVWLIRKQEKR"
     gene            7953..10538
                     /gene="acnB"
                     /locus_tag="ACJJDE_001348"
     CDS             7953..10538
                     /gene="acnB"
                     /locus_tag="ACJJDE_001348"
                     /EC_number="4.2.1.3"
                     /EC_number="4.2.1.99"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003679951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HGG7541267.1"
                     /translation="MLEAYRKAAAERAALGIPALPLTAQQTADLVELLKSPPAGEGEF
                     LVELLAHRVPPGVDDAAKVKASFLAAVAEGSASSPLISPEYATELLGTMLGGYNIHAL
                     IELLDDDKLAPIAAKGLKHTLLMFDSFHDVQEKAEKGNKYAQEVLQSWADAEWFASRA
                     KVPEKITVTVFKVDGETNTDDLSPAPDAWSRPDIPLHALAMLKNPRDGITPDKPGEVG
                     PIKLLEELKAKGHPVAYVGDVVGTGSSRKSATNSVIWHTGEDIPFVPNKRFGGVCLGG
                     KIAPIFFNTQEDSGALPIEVDVSALKMGDVVDILPYEGKIVKNGETVAEFELKSQVLL
                     DEVQAGGRINLIIGRGLTAKAREALKLPASTAFRLPQAPAESKAGFTLAQKMVGRACG
                     LPEGQGVRPGTYCEPRMTTVGSQDTTGPMTRDELKDLACLGFSADMVMQSFCHTAAYP
                     KPVDVKTHKELPAFISTRGGVSLRPGDGVIHSWLNRLLLPDTVGTGGDSHTRFPIGIS
                     FPAGSGLVAFAAATGVMPLDMPESVLVRFSGKLQPGVTLRDLVNAIPLYAIKQGLLTV
                     AKAGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTVKLNKEPIIEYMKSN
                     VVLMKNMIANGYQDPRTLERRIKAMEKWLANPELLEADKDAEYAAVIEINMDDIKEPI
                     IACPNDPDDVCFMSERSGTKIDEVFIGSCMTNIGHFRAASKLLEGKADTPVRLWIAPP
                     TKMDAKQLSDEGHYGVLGRAGARMEMPGCSLCMGNQAQVREGATVMSTSTRNFPNRLG
                     KNTFVYLGSAELAAICSKLGKIPTVEEYQANIGIINEQGDKIYRYMNFNEIDSYNEVA
                     ETVNV"
     gene            10680..11675
                     /locus_tag="ACJJDE_001349"
     CDS             10680..11675
                     /locus_tag="ACJJDE_001349"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0016597 - amino acid binding [Evidence
                     IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006591 - ornithine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HGG7541268.1"
                     /translation="MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKG
                     KNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDA
                     IEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYV
                     GDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAH
                     EAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAF
                     HNRETKVGEWIYETFGLNGVEVTEEVFESPASIVFDQAENRMHTIKAVMVAALGD"
BASE COUNT         2691 a         3256 c         3050 g         2748 t
ORIGIN      
        1 aaggcgaggc aacgccgtac tggtttttgt taatccacta taattcaata aattaatata
       61 tggcttaaaa taacgggatg cccgcctccc gtcctcctgc agaagcgggc gggtatcatt
      121 ttaaaacgcg gcatttaaaa tttgaccgaa aattgttgac aatccggaat caagtctgca
      181 caataccccg acaagtccaa gtattataaa ggctgaataa agaggaaaca gcaggcagat
      241 atattcggga ggtgcagtcc gaatatatct gcttttttat gcgcctccgg attgcctgcc
      301 gcacctttcc cttcagacgg catcagccgt ttccccataa tgccgcccga tgcctattta
      361 tctgccccgg caatttcaaa actgtgggta atctttgccg ctttgcccaa cataatcgaa
      421 gccgaacagt atttttcggc agacatctga acggcgcgct caatggccga ttctttcaaa
      481 tcatgcccga atactttgaa atggatgtgg atttcggtaa acacgcgcgg cgcatcgtcc
      541 gcccgtttcg ccgtaaccgt cgcacggcag tcagtcactt tctgacgctg tttttcggca
      601 atcatcacca catcgatgct cgaacagccc gccacgccca acagcagcat ttccaaaggg
      661 ctgggcccgc gcttagcctt accttctgcc gccgacccct ccataacgac gctgtgcccg
      721 ccttccgttg ttccgacaaa gcacattccg tctatccatt ttgatgtaac ctgcatggtg
      781 tcattcctga aaatagcgtt aaaaccgctt tgcatatggc gttattgtaa acaatttcaa
      841 gcggcttatg cagaaatatg gacaaaacgg caaaaaaaca cttgaaaacc gatttacggt
      901 ttggctgccc ggccgttgat ctgcaccgat ttgagtttca gcgtataggt tttgccgtcg
      961 tcggtatagc cgatttgtgc cggaatattg ttcagggacg gtgcgaagaa atacattacc
     1021 gtatcgtcgc cgcgccacac ccgatatttg acgacttcgg tttccacgcc gcctatgctg
     1081 tattttcctg tacccgcctt attcaaaccg ccgacggaat aaagtttttt gccgttggtg
     1141 attttcagcc ccggggggag tttcgcgtca tttgccgcca actgccaggc aagcgtgaac
     1201 aaatccatag ccttggggct ttgctcggtt ttgctctcgc ccgctttgcc gtaggttacg
     1261 ctgccgtcgg cgaatttggc ttccgcatac agtttgcccc tgcgtatgtc tctatagtag
     1321 gtagggtgca gggtattgcc gacaaccgta ccgccggact cgaaacggat attgtatagc
     1381 ggcactttaa tcgtcgaaac gattttgtaa gcattgccgc tgcgttcaaa tgtcatcgtg
     1441 gcgggaatgc cgtagctgcc ggaatagtgc agcacggcgg attggggcag ccctgccgca
     1501 tacgcgcacg gcagggcggc ggacaaaatg gcggcggaaa atatattttt aaaagtcttc
     1561 atcatttgct cccgcccggt ttacgccgtc aggaaacggg cggcatcggc gttttccgaa
     1621 tttctgacgc ggtttccctc gataatcagg cggccggcgg caaaatcggc aacggctttc
     1681 ggatagagtt tgtgttcgac agccaaaacc cgggcggcaa tatcgtctgc cgtatcacca
     1741 tcaagtatcg gcacaatccc ttgcgataca atcgggccgc aatccagctc ggccgtaaca
     1801 aagtgaatcg tacagcctgc aacgcggcaa cccgcttcca aagcgcgttc gtgcgtatga
     1861 agcccagtaa atgaaggcag gatggacgga tggatgttca tcagcctgcc ttcgtaatgg
     1921 gcgcaaaact cgggggtcag aatccgcata aaacctgcca aaaccaccaa atcgggttga
     1981 tatgcgtcga ttttttccat catggccgta tcgaaggcaa gtcgtgattc aaagttttta
     2041 tgattcaggc tatcggtcgg gatgccgcgt tcggccgccc attgcaaacc ggcagccgtt
     2101 tcgctgttgc tcaacacggc ggcaatgcgg acgttgggaa tggcggcatt gacgattgcc
     2161 tgcatattgc tgccgcgtcc ggaaatcagg atgacgatgt ttttcataat ggtacgcttt
     2221 tgaaagggat gccgtctgaa ccgctgtttg gtggtttcag acggcatttg ccgtaaaaat
     2281 gcccgaaaac ctgtttcggg catggattcg gacttaattt acttttttga tgtcgacttg
     2341 agccggctgc ttggcgggcg cgttttcggg tgcgccgatt ttgaccagtt tcacatcaaa
     2401 taccaaagtg gcgttcgggc cgattttgtc gcccgcaccc tgttcgcggt aggcaaggtt
     2461 ggacgggatg tagaacgtgg cttcgccgcc ttctttcaga agctgtacgc cttcggtcca
     2521 acccggaatc acttggctca aagggaaggt gaccgtgccg ccgttggctt tgctgctgtc
     2581 gaataccgta ccgtcaatca ggcggccttc gtattccacg gtaacgatgt cgtctttggt
     2641 cggctgtttg ccttcaccct gtttggtgat tttgtattgc aggccggaag cagtggtctt
     2701 cacgccgtct ttggcggcat tttctttcag aaaggcttcg cctttttctt tattggcctt
     2761 cgcgtccgcc ttgtgttttt ctacggcttt agcctgttgt tcctgaagga atttcatcat
     2821 gacttcctga gcctgctctt cggtcatttt gatttctttg ccgtcataca ctgcctgcat
     2881 ggcttcggta aagactttca aatcgatttc cgcgccctgt tccttcattt gcttcaggga
     2941 gcgtccgatg tccacgccca tcgcatagct tgcctgctgc atcgtgctgc cgatcgaaga
     3001 ggtgtcgccc tgcgcggaag aagcggcggc aggttcggat gcagatgcgg gggcggcttc
     3061 ttttttgccg caggcggaaa gtgccaaagc ggcggaaagg gtcagtgcgc tgattttgaa
     3121 aatggtgttc atgatggatc ttcgctgtcg ataaggtcgg aaaaacggga ttatagccga
     3181 gtttgaatgt ttcaacacac aggatgacac ataaagcgtc aatcgtgtgt tgccctgttt
     3241 tggaagggat tgaaccttcc aaaataagtt ttgattctac cgccccgagg gacagatgtc
     3301 caagtggcgg ggttcaaccg ataaggaaat tttaatcaaa tagaatcaag cctgtttaaa
     3361 ttttgtaaat gcggcatttc agacggcatt ttatgccttg ccctccatgc cgtgatgttc
     3421 gatggcaaaa ccgcttcggc ggtaggcggt aaagcgttcg cgcgcgtcgg cgagatcttc
     3481 caagctgttg ccgacgattt ccaaaacgcg cgcgggcaag accggagcgg tgttccaaaa
     3541 accgtcggac aggttcaaaa cggtcatgcc ttcgggaatt cggggcagat tgccgccgca
     3601 ggcaagcagg acggatgttt cagacggcat ggcttcttcc gtttcccaaa tttcgtgcgg
     3661 aatgaaactc tcggcctcgt attgccaaag cattttgtcc aattcctgaa gctgcccgaa
     3721 cgaatcggac cacaccagta tcctgccgcc gtcccgaatc gcacgggcaa tcaggcggca
     3781 ggtgaaaatc ggaacttggg caacgtgcgt gtaaaaggtg gctttcggca tattgtttga
     3841 acatttggca ggataatgcc gtctgaaagg cttcagacgg cattgtggca aaattaaaga
     3901 ttccgcagat agttcagcag caagggaacg ggacggccag tcgcaccttt ttccgcaccg
     3961 gatttccacg ccgtacccgc gatgtcaagg tgtgcccatg gatagtcttc ggtaaagtag
     4021 gataggaatg ttgcggcggt aatcgtgccc gcgccgggcg tgccgatgtt tggaatgtcg
     4081 gcaaagttgg atttgagttg gtctttgtag gtctcaaaga gcggcagttg ccatgctttg
     4141 tcgtccacgt tgtaggaagc ggcaagcagg ctgtcgatca aatcctgatt gttgcccatc
     4201 acgccgctga catcgtgccc caaggcgacg atgcatgcac cggtcagggt ggcgacgtcg
     4261 atgacggctt tgggtttgaa ctgctcggcg taagtgagcg cgtcgcacaa aatcagacgg
     4321 ccttcggcat cggtgttcaa cacttcgatg gtcagacctt tcatactttt cacgacatcg
     4381 cccggtttgt ttgccgcgcc ggaaggcata ttttcacaag tggcgacgac ggcaatcagg
     4441 ttaatcggca gttgcagttt gacggcggcg cagaaggtgc tgatgacggt tgccgcgccg
     4501 cacatatcaa acttcatttc gtccatgttc aggccgggct tgagggagat gccgccggtg
     4561 tcgaaggtaa tgcctttgcc gaccaatacc acaagcgcgg cttctttgtc ggctgcaccg
     4621 aaatagctca gttcgaccaa atagggggct tccgcgctgc ctttggcgac cgaccaaaac
     4681 gaacccatgt tttctttgat gtagtctttt tcgatgattt tggcgtgcgc gcccagtttt
     4741 tcggcttcgg ctttggcggt gcgcgctaaa aattcgggcg tgcattcgtt gggcgcggcg
     4801 ttgcccaagt cgcggcagag gctttgtccg taaacttgcg cttcggcgac gcgcaaggct
     4861 tctttaacgg cggcttcgtg tgcgctgtgg aacacggcgg tttcaaattt tgcgggcttg
     4921 gcttcttttt tgtagcggtc gaaacggtag gcggcgttgc cgaacgcaat cgcaaacgct
     4981 tcggctacgg cggcggcttg cgcttcatcg aaggcatgga tgtccacatt gaccgtttcc
     5041 tgattttgcg cccatttggc ggcttcggcg gcggccttgt tcaatgcggc gcggccggtg
     5101 cttttcagac agcatacggc aacagcctgc aaaccgttgc ctgtcgggat tttggtgtcg
     5161 gcaaaatttt gaccttcttc aagcgaagac aaaagggcaa gggcggtcgg atggtttaat
     5221 tgcgcctctt cggtgcagac aaataactgt gcgcctgcct gctgttcctg caagatttcg
     5281 gtttttgtgc taaattccac gtttattctc ctgattgaga cggttgtcgg tagttttcgg
     5341 acggcctttc gctcaaaaga ccgtctgaag acggctggca cgattgtacc ccatttgaag
     5401 caccgtctga aaccttgcgc ggacaatccg cctgcgccga accgcttacc gcccccctga
     5461 ccgcgattct atgatttatc aaagaaacct catcaaagaa ctctctttta ccgccgtcgg
     5521 cattttcgtc gtcctcttgg cggtattggt ctccacgcag gcaatcaacc tgctcggccg
     5581 tgccgccgac gggcgtgtcg ccatcgatgc cgtgttggca ttggtcggct tctgggtcat
     5641 cggtatgacg ccgcttttgc tggtgttgac cgcatttatc agtacgttga ccgtgttgac
     5701 ccgctactgg cgcaacagcg aaatgtcggt ctggctatcc tgcggattgg cattgaaaca
     5761 atggatacgc ccggtgatgc agtttgccgt gccgtttgcc gttttggttg ccgtcatgca
     5821 gctttgggtg ataccgtggg cagagctacg cagccgcgaa tacgctgaaa tcctgaagca
     5881 gaagcaggaa ttgtctttgg tggaggcagg cgagttcaac agtttgggca agcgcaacgg
     5941 cagggtttat tttgtcgaaa ccttcgatac cgaatccggc atcatgaaaa acctgttcct
     6001 gcgcgaacag gacaaaaacg gcggcgacaa catcatcttc gccaaagaag gtaacttctc
     6061 gctgaacgac aacaaacgca cgctcgaatt gcgccacggc taccgttaca gcggcacgcc
     6121 cggacgcgcc gactacaatc aggtttcctt ccaaaaactc agcctgatta tcagcaccac
     6181 gcccaaactc atcgaccctg tttcccaccg ccgcaccatt ccaaccgccc aactgattgg
     6241 cagcagcaat ccccaacacc aggcggaatt gatgtggcgt atttccttga ccgtcagcgt
     6301 tttgttgttg tgtctgcttg ccgtgccgct ttcctatttc aatccgcgca gcggccacac
     6361 ctacaacatc ctgattgcca tcggtttgtt tttggtttac caaaacgggc tgaccctgct
     6421 ttttgaagcc gtggaagacg gcaaaatcca tttttggctc ggactgctgc ctatgcacat
     6481 catcatgttc gtcatcgcaa tcgtacttct gcgcgtccgc agcatgccca gccagccctt
     6541 ctggcaggcg gttgacaaaa gtctgacatt gaaaggcgga aaatgaacct gatttcacgt
     6601 tacatcatcc gtcaaatggc ggttatggcg gtttacgcgc tccttgcctt cctcgctttg
     6661 tacagctttt ttgaaatcct gtacgaaacc ggcaacctcg gcaaaggcag ttacggcata
     6721 tgggaaatgc tgggctacac cgccctcaaa atgcccgccc gcgcctacga actgatgccc
     6781 ctcgccgtcc ttatcggcgg actggtctct ctcagccagc ttgccgccgg cagcgaactg
     6841 accgtcatca aagccagcgg catgagcacc aaaaagctgc tgttgattct gtcgcagttc
     6901 ggttttattt ttgctattgc caccgtcgcg ctcggcgaat gggttgcgcc cacactgagc
     6961 caaaaagccg aaaacatcaa agccgccgcc atcaacggca aaatcagcac cggcaatacc
     7021 ggcctttggc tgaaagaaaa aaacagcatt atcaatgtgc gcgaaatgtt gcccgaccat
     7081 acgcttttgg gcatcaaaat ttgggcgcgc aacgataaaa acgaattggc agaggcagtg
     7141 gaagccgatt ccgccgtttt gaacagcgac ggcagttggc agttgaaaaa catccgccgc
     7201 agcacgcttg gcgaagacaa agtcgaggtc tctattgcgg ctgaagaaaa ctggccgatt
     7261 tccgtcaaac gcaacctgat ggacgtattg ctcgtcaaac ccgaccaaat gtccgtcggc
     7321 gaactgacca cctacatccg ccacctccaa aacaacagcc aaaacacccg aatctacgcc
     7381 atcgcatggt ggcgcaaatt ggtttacccc gccgcagcct gggtgatggc gctcgtcgcc
     7441 tttgccttta ccccgcaaac cacccgccac ggcaatatgg gcttaaaact cttcggcggc
     7501 atctgtctcg gattgctgtt ccaccttgcc ggacggctct tcgggtttac cagccaactc
     7561 tacggcatcc cgcccttcct cgccggcgca ctacctacca tagccttcgc cttgctcgcc
     7621 gtttggctga tacgcaaaca ggaaaaacgt tgaaccaatg ccgtctgccc cccttcggac
     7681 ggcattggtt tgtattatca tattcccgta gacagatagc cgttccctat tatagtggat
     7741 taacaaaaac cagtacggcg ttgcctcgcc ttgccgtact attgtactgt ctgcggcttc
     7801 gtcgccttgt cctgatttaa aatacattac ctgtcataac agttccattt ttgttaaaac
     7861 tagtctatga tagcggtaca aatattgttt acaatattta acgcaaatca tttgcaaccc
     7921 gacaaaagaa aaacagaaaa aggaacaaag agatgttaga agcctatcgt aaagccgccg
     7981 ccgagcgcgc cgcccttggt attcccgccc ttcctctgac tgctcagcaa accgccgatt
     8041 tggttgagct gctgaaaagc ccgcccgcag gcgaaggcga gttcttggtc gaactgcttg
     8101 cccaccgtgt tccgcccggt gtggacgatg ccgccaaagt caaagcctca ttcctggctg
     8161 ccgttgccga aggcagcgcg tccagcccgc tgatctcccc cgaatatgcg accgaactct
     8221 taggtacgat gctcggcggt tacaatatcc acgccttaat cgaactcttg gacgacgaca
     8281 aactcgcgcc cattgccgcc aaaggcttga aacatacgct tctgatgttc gattccttcc
     8341 acgacgttca ggaaaaagcc gaaaaaggca acaaatacgc gcaagaagtt ttgcaatctt
     8401 gggcagatgc cgaatggttc gcctcacgcg ccaaagttcc cgaaaaaatc accgttaccg
     8461 ttttcaaagt tgacggcgaa accaatacag acgacctctc ccccgcgccc gacgcgtgga
     8521 gtcgtcccga tattccgctg cacgcgctgg ccatgctgaa aaacccgcgc gacggcatca
     8581 cgcccgacaa accgggcgaa gtcggtccga ttaaattgtt ggaagaactc aaagccaaag
     8641 gccatccggt tgcttacgtc ggcgacgtgg tcggtactgg ttcttcacgc aaatccgcga
     8701 ccaactccgt catttggcat accggcgaag acattccgtt cgtgccgaac aaacgcttcg
     8761 gcggcgtatg tttgggcggc aaaatcgcgc cgattttctt caatacccaa gaagattccg
     8821 gcgcgctgcc gattgaagtc gatgtatctg ctctaaaaat gggcgatgtc gtcgatatcc
     8881 tgccttatga aggcaaaatc gtgaaaaacg gcgagactgt tgccgagttt gaattgaaat
     8941 cacaagtatt gctggacgaa gtgcaagccg gcggccgtat caacctgatt atcggtcgag
     9001 gtctgaccgc caaagcgcgc gaagccctga aactgcctgc ctctactgca ttccgcctgc
     9061 cgcaagcgcc tgccgaaagc aaagccggtt tcaccttggc gcaaaaaatg gtcggccgcg
     9121 cctgcggtct gcccgaagga caaggcgtgc gcccgggtac ttactgcgaa ccgcgtatga
     9181 cgacggtcgg ctcgcaagac acgaccggcc cgatgacccg cgacgagttg aaagacttgg
     9241 cttgtttggg cttctccgcc gatatggtga tgcagtcttt ctgccacacc gccgcctatc
     9301 cgaaacctgt cgatgtaaaa acccataaag aactgcccgc ctttatttcc acccgtggcg
     9361 gcgtgtcact gcgtccgggc gacggcgtca tccactcgtg gctcaaccgc ctgctgctgc
     9421 ccgataccgt cggcaccggc ggcgacagcc atacccgttt ccccatcggt atttccttcc
     9481 ccgccggctc cggcttggtt gcctttgccg ccgcaacggg cgtaatgccg ctcgatatgc
     9541 ccgagtctgt attggtacgc ttcagcggca agctgcaacc gggcgtaacc ctgcgcgatt
     9601 tggtgaacgc catcccgctg tacgcaatca aacaaggttt gctgaccgtt gccaaagccg
     9661 gtaagaaaaa catcttctcc ggccgcatcc tcgaaatcga aggcctgcct gatttgaaag
     9721 tggaacaagc ctttgaattg accgacgcat ccgccgaacg ctccgccgcc ggctgtaccg
     9781 tgaagctcaa caaagagccg attatcgagt acatgaaatc caacgtcgtg ttgatgaaaa
     9841 acatgattgc caacggctat caagacccgc gcactttgga acgccgcatc aaagctatgg
     9901 aaaaatggct ggcaaatccc gagttgctcg aagcggataa agatgccgaa tacgccgccg
     9961 tgattgaaat caacatggac gacatcaaag agccgattat cgcctgcccg aacgacccgg
    10021 acgacgtgtg cttcatgtcc gaacgctccg gcaccaaaat cgacgaagta ttcatcggtt
    10081 cgtgtatgac caacatcggc cacttccgcg ccgcctccaa acttttggaa ggcaaggcag
    10141 acacccccgt ccgcctgtgg attgcgccgc cgaccaaaat ggacgcgaaa caattgtccg
    10201 acgaaggaca ctacggcgta ctcggacgtg ccggcgcgcg tatggaaatg ccgggttgct
    10261 ccttatgtat gggtaatcag gcgcaagtac gcgaaggtgc gaccgttatg tccacctcca
    10321 cccgcaactt cccgaaccgt ttgggtaaaa acacctttgt ttacctcggt tcggcggaat
    10381 tggcagcgat ttgctccaaa ctgggtaaaa tcccgaccgt tgaagaatat caagccaata
    10441 tcggcatcat caacgaacag ggcgataaaa tctaccgcta tatgaacttc aacgaaatcg
    10501 acagctacaa cgaagtagcc gagaccgtga acgtttaatc cccgtcatcc gtatgaagta
    10561 agggattgac cgcaatgccg tctgaacaac cttcagacgg cattgcaaca ttccgctaac
    10621 ccttctttcc gcaaacgctg caaatacggc gttcacgccc ccacataaag gaaacgacag
    10681 tgaacctgaa aaaccgccat tttctgaaac ttttagactt cacgccggaa gaaatcaccg
    10741 cctacctcga ccttgccgcc gaattgaaag ccgccaaaaa agcagggcgc gagattcagc
    10801 ggatgaaagg gaaaaacatc gccctgattt ttgaaaaaac ctctactcgg acgcgctgcg
    10861 cgtttgaagt cgccgcgcgc gatcaaggcg cgggagtgac ttatttagag ccgtccgcca
    10921 gccaaatcgg gcataaggaa agcatcaaag acaccgcccg cgtgttgggc aggatgtacg
    10981 atgccatcga atatcgcggt ttcggtcagg aagttgttga agaattggcg aaatacgcgg
    11041 gcgtacccgt gttcaacggg ctgaccaacg agttccatcc cacacaaatg cttgccgacg
    11101 cactgactat gcgcgaacac agcggcaaac ctttgaacca aaccgcgttt gcctacgtcg
    11161 gcgacgcgcg ttacaacatg ggcaattccc tgctgatttt aggggcaaaa ttggggatgg
    11221 acgtgcgtat cggcgcaccg caaagcctgt ggccgtctga aggcattatt gccgccgcac
    11281 acgccgccgc caaagaaacc ggcgcaaaaa ttaccctgac cgaaaacgcg catgaagccg
    11341 tgaagaatgt tgattttatt cataccgatg tgtgggtcag catgggcgag ccgaaagaag
    11401 tctggcagga acgcatcgat ttgctgaaag attaccgcgt tacgcccgaa ctgatggcgg
    11461 catcgggcaa tccgcaagtc aaattcatgc actgcctgcc cgccttccac aaccgcgaaa
    11521 ccaaagtcgg cgaatggatt tacgaaacct tcgggctgaa cggtgtggaa gttacagaag
    11581 aagtattcga aagccccgcc agcatcgtgt tcgatcaggc ggaaaaccgt atgcacacga
    11641 ttaaagcggt aatggtcgcg gctttgggcg actgacagaa ctgtgcctgt ttaaattcat
    11701 ccgcaacaca gataccgtct gaacacgatg ttcagacggt atcca
//
LOCUS       DBBZXU010000059        11645 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.059, whole genome shotgun sequence.
ACCESSION   DBBZXU010000059 DBBZXU010000000
VERSION     DBBZXU010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11645)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11645)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11645
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.059"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(132..1424)
                     /locus_tag="ACJJDE_001350"
     CDS             complement(132..1424)
                     /locus_tag="ACJJDE_001350"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HGG7541269.1"
                     /translation="MAVFPLSAKHRKYALRALAVSIILVSAAYIASTERTERVRPQRV
                     EQNLPPLSWGGSGVQTAYWVQEAVQPGDSLADVLARSGMARDEIARITEKYGGEADLR
                     HLRADQSVHVLVGGDGGAREVQFFTDEDGERNLVALEKKGGIWRRSASEADMKVLPTL
                     RSVVVKTSARGSLARAEVPVEIRESLSGIFAGRFSLDGLKEGDAVRLMYDSLYFHGQQ
                     VAAGDILAAEVVKGGTRHQAFYYRSDKEGGGGGNYYDEDGKVLQEKGGFNIEPLVYTR
                     ISSPFGYRMHPILHTWRLHTGIDYAAPQGTPVRASADGVITFKGRKGGYGNAVMIRHA
                     NGVETLYAHLSAFSQAQGNVRGGEVIGFVGSTGRSTGPHLHYEARINGQPVNPVSVAL
                     PTPELTQADKAAFAAQKQKADALLARLRGIPVTVSQSD"
     gene            1502..2470
                     /locus_tag="ACJJDE_001351"
     CDS             1502..2470
                     /locus_tag="ACJJDE_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541270.1"
                     /translation="MKLTLALPSLNLDEDEIRIPLCLPAFNKILQYGSLHRQSCTASA
                     FYARYLWCGRLAERAAQSLNMPSEAVALATPVWQKMGMHQANVLTAEYLNVGTDEAER
                     LCRDLSAFYGDIPWRFVPVLPELWLVSLPCAYRWGAKPVLDLGGLLGADDQPDGEDAL
                     EWLRVQTEIQMWLAAHPVNHNRKKRGLPELNGLWLWDGTNGGAQGGTLFADTVWSRFH
                     PDRRALPDNFRAYEETAAHLPDTHHILFMDDLRLTALTGDRERYAAILQQWEERWFAP
                     LYEAVRTGKIKRLDITTDGQHGGTLTFKPADRWKFWRGAKTFDGIW"
     gene            complement(2671..4137)
                     /locus_tag="ACJJDE_001352"
     CDS             complement(2671..4137)
                     /locus_tag="ACJJDE_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7541271.1"
                     /translation="MVIFYFCGKTFMPARNRWMLLLPLLASAAYAEETPREPDLRSRP
                     EFRLHEAEVKPIDREKVPGQVREKGKVLQIDGETLLKSPELLSRAMYSAVVSNNIAGI
                     RVILPIYLQQAQQDKMLALYAQGILAQADGRVKEAISHYRELIAAQPDAPAVRMRLAA
                     ALFEDRQNEAAADQFDRLKAENLPPQLMEQVELYRKALRERDAWKVNGGFSVTREHNI
                     NQAPKRQQYGKWTFPKQVDGTAVNYRLGAEKKWSLKNGWYTTAGGDVSGRVYPGNKKF
                     NDMTAGVSGGIGFADRRKDAGLAVFHERRTYGNDAYSYTNGARLYFNRWQTPKWQTLS
                     SAEWGRLKNTRRARSDNTHLQISNSLVFYRNARQYWMGGLDFYRERNPADRGDNFNRY
                     GLRFAWGQEWGGSGLSSLLRLGAAKRHYEKPGFFSGFKGERRRDKELNTSLSLWHRAL
                     HFKGITPRLTLSHRETWSNDVFNEYEKNRAFVEFNKTF"
     gene            4167..4460
                     /locus_tag="ACJJDE_001353"
     CDS             4167..4460
                     /locus_tag="ACJJDE_001353"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541272.1"
                     /translation="MPLFQTLPPDAATMPSEARIGFQTAAKNRRFSAGFIIMPRPSGQ
                     QGSDWFAGRRAVPCRCAACTSKHFPTHQNSHLSDNAASLSPSVLLPYPMRADI"
     gene            complement(4379..6452)
                     /locus_tag="ACJJDE_001354"
                     /pseudo
     CDS             complement(4379..6452)
                     /locus_tag="ACJJDE_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581764.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(7396..7641)
                     /locus_tag="ACJJDE_001355"
     CDS             complement(7396..7641)
                     /locus_tag="ACJJDE_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541273.1"
                     /translation="MLKSIELNSHIRNRLAEYLKGRGMDFQTAMQEEKGNKEIAAIVH
                     SGLPTLVRKLYSEQKMQKFFWEKRDLIADYISRRMQG"
     gene            7753..8181
                     /locus_tag="ACJJDE_001356"
     CDS             7753..8181
                     /locus_tag="ACJJDE_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family protein"
                     /protein_id="HGG7541274.1"
                     /translation="MMFSWFKLFHLFFVISWFAGLFYLPRIFVNMAMIDVPRGNPEYV
                     RLSGMAVRLYRFMSPLGFGAVVFGAAIPFAAGWWGSGWVHVKLCLGLMLLAYQLYCGV
                     LLRRFQDYSNAFSHRWYRVFNEIPVLLMVAALYLVVFKPF"
     gene            8193..8669
                     /locus_tag="ACJJDE_001357"
     CDS             8193..8669
                     /locus_tag="ACJJDE_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HGG7541275.1"
                     /translation="MPIEIERRFLIGNDNWRQYADEPLLLRQGYLSVEKERTVRVRIA
                     GKQAWLTLKGYISEISRSEFEYEIPLADAEKMMETMCPFKMEKWRYPVRWGGSLFEID
                     VFLGDNAPLVVAEIELPDENADFDRPDWLGREITADGMFTNAYLSRHPFSSWKNAV"
     gene            complement(9019..9507)
                     /locus_tag="ACJJDE_001358"
     CDS             complement(9019..9507)
                     /locus_tag="ACJJDE_001358"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HGG7541276.1"
                     /translation="MLKITLIAACAENLCIGAGNAMPWHIPEDFAFFKAYTLGKPVIM
                     GRKTWESLPVKPLPGRRNIVISRQADYCAAGAETAASLEAALALCAGAEEAVIMGGAQ
                     IYGQAMPLATDLRITEVDLSVEGDAFFPAIDRTHWKEAERTERRVSSKGTRYAFVHYL
                     RY"
     gene            complement(9575..10630)
                     /gene="aroG"
                     /locus_tag="ACJJDE_001359"
     CDS             complement(9575..10630)
                     /gene="aroG"
                     /locus_tag="ACJJDE_001359"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HGG7541277.1"
                     /translation="MTHHYPTDDIKIKEVKELLPPIAHLYELPISKEASGLVHRTRQE
                     ISDLVHGRDKRLLVIIGPCSIHDPKAALEYAERLLKLRKQYENELLIVMRVYFEKPRT
                     TVGWKGLINDPHLDGTFDINFGLRQARSLLLSLNNMGMPASTEFLDMITPQYYADLIS
                     WGAIGARTTESQVHRELASGLSCPVGFKNGTDGNLKIAIDAIGAASHSHHFLSVTKAG
                     HSAIVHTGGNPDCHVILRGGKEPNYDAGHVSEAAEQLRAAGVTDKLMIDCSHANSRKD
                     YTRQMEVAQDIAAQLEQDGSNIMGVMVESHLVEGRQDKPEVYGKSITDACIGWGATEE
                     LLALLAGANKKRMARAG"
     gene            complement(10792..11019)
                     /locus_tag="ACJJDE_001360"
     CDS             complement(10792..11019)
                     /locus_tag="ACJJDE_001360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541278.1"
                     /translation="MGNTRIPIKSFFKQLVLFVFNIFLAYEILPDVQAESAAGCPVPD
                     CRGNGKTDVPCGFVRMNGGYCFYQSVSFSLE"
     gene            11297..11554
                     /locus_tag="ACJJDE_001361"
     CDS             11297..11554
                     /locus_tag="ACJJDE_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541279.1"
                     /translation="MTTQMGASRDVSKSAKGWSVGIGLNVGKQLTDSVGLEFDPYYRH
                     KTIYKPREIVLDGDKTKMGRSKSNEYGFRVAATFYSQLKSK"
     gene            complement(11536..>11645)
                     /locus_tag="ACJJDE_001362"
     CDS             complement(11536..>11645)
                     /locus_tag="ACJJDE_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003755953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HGG7541280.1"
                     /translation="NPIEKVWANIKRYLRTVLSDYARFDDALLSYFDFN"
BASE COUNT         2667 a         3244 c         2849 g         2885 t
ORIGIN      
        1 cttagagaat cgttctcttt gagctaaggc gaggcaacga cgtactggtt tttgttaatc
       61 cactataaat gccgtctgaa aacctgtttg cagattttca gacggcattg ttttcgtcgc
      121 cggttcaaac ttcaatccga ttgcgacacg gtaaccggta tgccgcgcaa gcgcgcaagc
      181 agcgcgtccg ccttctgttt ctgcgcggca aacgccgcct tgtccgcctg cgtcaattcg
      241 ggtgtcggca atgcgaccga aacaggattg acgggctgcc cgttgatgcg tgcctcgtaa
      301 tgcaggtgcg gcccggtcga acgccctgtc gaaccgacaa aaccgatgac ctcgccgccg
      361 cgcacattgc cttgtgcctg cgaaaacgcg ctcaagtgcg cgtacagcgt ttccacaccg
      421 ttggcgtggc gtatcatcac cgcgttgccg tatccgccct tccggccttt aaaggtaatc
      481 acgccgtcgg cggaagccct gaccggcgtt ccctgcggtg cggcataatc gatgcccgtg
      541 tgcagccgcc atgtgtgcag gatggggtgc atacggtagc cgaacggcga agaaatgcgc
      601 gtatagacca gcggctcgat gttgaagccg cctttttcct gcaacacctt gccgtcttca
      661 tcataataat tgccgccccc tccgccttcc ttgtccgaac ggtaatagaa cgcctgatgc
      721 cttgtgccgc ccttaacgac ttcagccgcc aaaatatcgc ccgccgccac ctgctgcccg
      781 tggaaataca ggctgtcgta catcaggcgc acggcatcgc cttccttcaa accgtcaagg
      841 ctgaagcggc cggcgaaaat cccgcttaag gattcgcgga tttcgacggg cacttccgcc
      901 cgcgccagcg aaccgcgcgc cgacgttttg accacgaccg aacgcagcgt cggcaaaacc
      961 ttcatatccg cctcagaagc cgaccgccgc catatgccgc ctttcttttc caaagcgacc
     1021 agattgcgct cgccgtcttc gtcggtaaaa aactgcactt cgcgcgcgcc gccgtcgccg
     1081 ccgaccaaaa catgaaccga ctggtcggca cgcaaatgcc gcaaatcggc ttcgccgcca
     1141 tatttttccg tgattcgggc aatctcgtcc cgcgccatac ccgaacgcgc cagcacgtcc
     1201 gccagcgagt cgcccggctg caccgcctcc tgcacccaat atgccgtctg aacgccgctg
     1261 ccgccccaag acagcggcgg cagattttgt tccacgcgct gcggtctgac gcgctccgtc
     1321 ctctctgtcg aagcaatgta tgccgccgac accaaaataa tcgaaacggc aagcgcacgc
     1381 agcgcgtatt tccgatgttt tgccgaaagt gggaagacag ccatattgtt cctttttgac
     1441 ggcgtttgcg ccgaatcctc tataatgttg cgcctgacct gcatttctga aacgtcaaac
     1501 gatgaaactc accctcgccc tcccctcgct caatttggat gaagacgaaa tccgaatacc
     1561 tctatgcctg cccgccttca acaaaatcct gcaatacggc tcgctgcacc gccaaagctg
     1621 cacggcttcg gcattttacg cgcgttattt gtggtgcggc agactggcgg aacgcgcggc
     1681 gcaaagcctg aatatgccgt ctgaagccgt cgcgctcgcc acgcccgtct ggcaaaagat
     1741 ggggatgcat caggcaaatg tgctaacggc ggaatatctg aacgtcggta cggatgaagc
     1801 ggaacggctc tgccgcgacc tgtcggcgtt ttacggcgac attccatggc gtttcgttcc
     1861 cgtcctgccc gaattatggc tggtttccct tccttgcgcg taccgctggg gcgcgaagcc
     1921 cgttttggac ttgggcggat tgttgggcgc ggacgatcag ccggacggag aagatgcgtt
     1981 ggaatggctg cgcgtccaaa ccgaaatcca aatgtggctg gcggcgcacc ccgtcaacca
     2041 taaccgcaaa aaacgcgggc tgcccgagtt gaacggctta tggctttggg acggcacaaa
     2101 cggcggcgcg caaggcggca cacttttcgc cgatacggtt tggagccgtt tccaccccga
     2161 ccgccgcgca ttgcccgaca acttccgcgc ctatgaagaa acggcggcac acctgcctga
     2221 cacgcaccat atcctgttta tggacgattt gcgcctgacc gccctgacag gggacaggga
     2281 gcggtatgcg gcaatattgc agcagtggga agaacgctgg ttcgcaccgc tttacgaagc
     2341 cgtccgtacc ggcaaaatca aacggctgga catcaccacg gacggacaac acggcggtac
     2401 gctgaccttc aaacccgccg acaggtggaa attttggcgc ggcgcgaaaa cctttgacgg
     2461 aatctggtga acccgcctgc cgcaaccgcg acaatgccgt ctgaagcccg aatcgggttt
     2521 cagacggcat tttacctcgc atcgccgtta tgccggaaaa accggaatgc gtttccgcac
     2581 acgcggcggc acgcaaagca ccgcccgaaa gccgccgatg cccgccgtga taccgccgcc
     2641 ggcagggttt cctccgaaaa ggaacagcaa tcagaacgtt ttattaaact cgacaaacgc
     2701 ccgatttttc tcatattcgt tgaacacatc gttactccac gtttcgcggt gcgacagcgt
     2761 caggcgcggc gtgatgcctt tgaaatgcaa tgcccggtgc caaaggctca aggatgtgtt
     2821 caattcttta tccctgcgcc tttccccttt aaaaccgctg aaaaagccgg gtttttcata
     2881 atgccgtttc gccgcgccga ggcgcaacag cgaagacagg ccgctgccgc cccattcctg
     2941 cccccaggca aagcgcaggc cgtaacggtt gaaattgtcg ccccggtcgg cggggttgcg
     3001 ctcgcggtaa aaatccaaac cgcccatcca atattggcgc gcattccggt aaaacaccag
     3061 cgaattggaa atttgcaaat gggtattgtc ggaacgcgcc cggcgcgtat tcttcaaacg
     3121 cccccactcc gccgaagaca acgtttgcca tttcggggtt tgccaacggt tgaaataaag
     3181 gcgtgcgccg ttggtgtaag aataagcgtc gttgccgtag gtgcggcgtt cgtggaacac
     3241 tgccagcccg gcatctttgc gccggtcggc aaaaccgatg ccgccggaaa cgcctgccgt
     3301 catatcgttg aatttcttat tccccggata aaccctgccg gacacgtcgc cgcccgccgt
     3361 cgtgtaccag ccgtttttca gcgaccattt tttctccgcg ccgagccggt aattgaccgc
     3421 cgtgccgtcc acctgtttcg ggaaagtcca tttgccgtac tgctgccgtt tcggggcttg
     3481 gttgatattg tgttcgcggg taacgctgaa gccgccgttt accttccacg catcgcgttc
     3541 gcgcaatgcc ttgcggtaca gctcgacctg ctccatcagc tgcggcggca ggttttccgc
     3601 cttcaggcgg tcgaactggt ctgccgccgc ctcgttctgc ctgtcttcaa acaatgctgc
     3661 cgccaaacgc atacggacgg cgggcgcgtc gggttgggcg gcaatcaatt cccggtaatg
     3721 ggaaatcgcc tccttcaccc taccgtctgc ctgcgccaaa atcccttgtg cataaagtgc
     3781 caacatctta tcctgctgcg cctgttgtag gtaaatcggc aaaataacgc ggataccggc
     3841 aatattgttt gagaccactg cggaatacat cgcgcgggac aacaattcgg gacttttcag
     3901 cagggtttct ccgtcaatct gcaaaacttt tcctttttcc cgcacctgcc ccggtacctt
     3961 ctccctgtcg attggtttga cctccgcttc atgaagcctg aactcgggac ggcttctcaa
     4021 atccggttcg cgcggtgttt cttcggcata tgccgcactt gccaataaag gcagcagcag
     4081 catccatctg tttcgtgcag gcataaatgt cttcccacaa aaataaaaaa taaccattat
     4141 caatcggcgg attgtatcag ttttttatgc cgctgttcca aaccctgccg cccgatgccg
     4201 cgacaatgcc gtctgaagcc agaatcgggt ttcaaacggc ggcaaaaaac cggcggtttt
     4261 ccgccggttt catcattatg ccccgccctt cggggcagca gggttcggat tggtttgcgg
     4321 ggcggcgtgc ggtgccgtgc cggtgtgccg cctgtacgtc aaaacatttc ccgacgcatc
     4381 aaaacagcca tttgagcgac aatgcggctt ctttgtcgcc gtccgtcctt ttgccgtatc
     4441 cgatgcgtgc ggacatatga cctttccaac cggcttcaat gccgaaccgc ccttcgagcg
     4501 ccgtcctgcc tgccagcgtc tgtttttcgc cgtccatttc cacgccgaaa gattttgacc
     4561 tgtgcaaaac attaaaagcg gcaaaaggct gaagattgac accattacgc aaagcaaaac
     4621 ggttttttgc ccgaatgccg gcgcggcttt gccactgacc gctgccgagc agtccgaccc
     4681 ccgtcccctc gctgtcggta aagccgccgt ttacgcccaa gtaggtaaac tgcgcctgcg
     4741 gttgcaggta aaaccgcaca ttattgcctt ttccgacaac gccttccgcc acaagcgtgt
     4801 tgtagccgcc ttcgacagaa gccgtccaac ctttggtttt gtagcgttcc gcacggtttt
     4861 catcattgat gcggtgtttg aaacgttggt attgcaacca gccgtccaaa tacgcacccg
     4921 tttgtttatc gcgcaactga tgccacgcag cataaacacc cccgccataa ccatgcaaat
     4981 cactgcctgc cgcaccgcct ttgctgttaa ctgatgcgtg ctggccgacc ctgccgccca
     5041 tcacgccgat tgccagccgg ctgccttcat tttgccgtac aaacacctcg ccgccgattt
     5101 gcacgccttt gcgccgcccg tccgcagccg cgccaccccg tatattttga cgggacggat
     5161 cggcggcata cacgtcgtcg cccctgtcgg cggcacgcag cccaaacaaa gtatttgccg
     5221 cataagcctg ttgggcatat aaaaccgctt ccgcctcggg gatagccaaa cgctgcacgc
     5281 ccaagcaaaa tccgccttcg cattgcttga gcaataattc gtacagtccc tgccggtaat
     5341 tttgtttaaa cgcaaacgaa ccggaatccg ccgtttttgc cgcaatcagt ttgcgcccgt
     5401 cgagcgtttt cagattttcc ggccggcgtt ccaaaaccac gccggattgt ccgctgactt
     5461 tgtcttcaaa ggtcagggcg ggttcgtccg actcccgcac gtcgtagccg aacaggaaat
     5521 ccgcgccgcc cgcataatcc ttatggacgg tcagtttttc atctttcgtg ttcaggcgga
     5581 tgcgggcatt atcggaagtt tccagcgtat ggatgtcgga atggcggcgc ggttcccaaa
     5641 gggaatcttt cagcgtcatc ttggtcagtt ccaacacctg tccagcgacg tgggatttgt
     5701 tttcgatttt gacgtgtaat tttttattga agatgttgtc gagattggtc ggtgttgtat
     5761 tactatgagg agtgagtaca gcttcttcta taattggatc aataactttt ctaaatttat
     5821 taattttatt tctaggtatt ccatattgtt ttattatcgc ttcctcaact atttttttat
     5881 ttttttcccc aatcttcggg tcttgtttta tataaatcct ttaattgatc cttaaccgcc
     5941 tgctttaaat cagctccgta attctctgta acatatttct taacaacggg catattatcg
     6001 acggcgagga tgccgctatt gtagttttta cccgtgatat tgatttcgtc atacaaggct
     6061 tcagatgaat ttggatcggt tttaccgctg gaaaaataat gggaaacgcc gtttgccggc
     6121 ttgtctgaaa atgaaaaatc ggcagcatcg ccaatatttg tagaacgagt atccgaaccg
     6181 ggctgataac tgaaagcacc gaagcaatca aaagacacac tgcacgggcc gcgccaaacg
     6241 tgggaatttc tgtcttccgc cgcttctaaa ataaatttgt ttttaatctc ggcttctttg
     6301 acgggatcgt acgcatccga acctcaaaca tatggcgtgc aaaacagcga taaaacagat
     6361 aatgttaata gattaacccg accgcttgct tgcttgcttg cttgcttgct tgcttgcttg
     6421 cttgcttgct tgctttcagt gtcatgagaa attttccttt gtcaagtgtt aaaattataa
     6481 tgattatata ctacatcaca ctacatcgca atgaaaaatc aggaaaaaca aaaaacctct
     6541 ccgccgtcat tcccgcgcag gcggaaatct agaattttaa tgcggcaaga atttatcgga
     6601 aaaaactgaa gtttaaagac ctagattccc gcctgcgcgg gaatgacggt ttagaaatca
     6661 cctgaaacga gaaaaagaac cgaaaccgga caagtcggat tcccgcacgg gcgggaagga
     6721 cggaatttca gattgttgtt tttgattttc tgttttgtgg gaataacggg attttggatg
     6781 atgtgcattt atcgggaaaa ctaaaaaccc tccgccgtca ttcccgtgaa agcgggaatc
     6841 tagaatttca atgccgcaag aatttatcgg ggatgtccgg ggtttaaagg tctggattcc
     6901 cgcctgcacg ggaatgacgg tttagaaatc acctgaaacg agaaaaagaa ccgaaaccag
     6961 ataagtcgga ttcccgcacg ggagggaagg acgggatttc aggttactgt ttttgatttt
     7021 ctgttttgtg ggaataacgg gattttggat gatgtgcatt ttcgggaaaa ctaaaaaccc
     7081 tccgccgtca ttcccgcgaa agcgggaatc tagaatttta atgcggcaaa aatttatcgg
     7141 aaaaaaccga agtttaaaga cctagattcc cgcctgcgcg ggaatgacgg tttagaaatc
     7201 acccgaaacg agaaaaagaa ccgaaaccga acaagccgga ttaccgcctg cgcgggaatg
     7261 acggctcaaa agttacgaaa cgaaaaataa ccgaaaccaa acaagtcgga ttcccgcgcg
     7321 ggcgggaatg acgataagcg taatttcaat ctgccatatt gtcttttcac ttgcctgaaa
     7381 acagatttca gccacctatc cctgcatccg gcggctgatg tagtcggcaa tcaaatcccg
     7441 cttttcccaa aaaaacttct gcattttttg ttcggaatac agtttgcgga ccagagtggg
     7501 caaaccgctg tggacgatgg cggcgatttc tttgttgcct ttttcttcct gcattgccgt
     7561 ctgaaaatcc atacccctgc ctttcagata ttctgcaagg cggttgcgga tgtgggaatt
     7621 gagttcgatg gatttgagca ttttgcctcc gttttgcggt aaggatttat tcgatttgtt
     7681 tatccgcctg attttatcac gtttcccaag cggtttgcct gtacaatacc gcttttcggc
     7741 agggtgtggg cgatgatgtt ttcttggttc aagctgtttc acttgttttt tgtcatttcg
     7801 tggtttgcag ggctgtttta cctgccgagg attttcgtca atatggcgat gattgatgtg
     7861 ccgcgcggca atcccgagta tgtgcgtctg tcgggcatgg cggtgcggct gtaccgtttt
     7921 atgtcgccgt tgggcttcgg cgcggtcgtg ttcggcgcgg cgataccgtt tgccgccggc
     7981 tggtggggca gcggctgggt acacgtcaaa ctgtgtttgg gcttgatgct cttggcttac
     8041 cagttgtatt gcggcgtgct gctgcgccgt tttcaggatt acagcaatgc tttttcacac
     8101 cgctggtacc gcgtgttcaa cgaaatcccc gtgctgctga tggttgccgc gctgtatctg
     8161 gtcgtgttca aaccgttttg acggagcatc ttatgccgat agaaatcgaa cgccgttttt
     8221 tgattggaaa cgacaactgg cggcaatacg ccgacgaacc gctgctgttg aggcagggtt
     8281 atctgtctgt tgaaaaagaa cgcaccgtcc gtgtccgcat tgccggaaaa caggcgtggc
     8341 tgacgctgaa aggctatatt tcggaaatca gccgcagtga gtttgaatac gaaatcccgc
     8401 ttgccgatgc ggaaaagatg atggaaacga tgtgcccgtt taaaatggaa aaatggcgtt
     8461 atccggtcag atggggcggc agcctgtttg aaatcgatgt ttttcttggc gataatgcgc
     8521 ctttggtcgt cgcggaaatc gagttgcccg acgagaatgc cgattttgac cgtccggact
     8581 ggctgggacg ggaaatcact gccgacggta tgtttaccaa tgcctatttg agcaggcatc
     8641 cgttctcaag ctggaaaaat gccgtctgaa acggcttcag acggcattct ccgacaacca
     8701 tcgcaaatcc aaagacagcc tctatatcct tatttctgct ttctttgttc cattattccc
     8761 aataaatccc cataacctaa aatctcgtca ttcccgcgca ggcgggaatc cggttcttta
     8821 aacttcggtt ttttccgata aattgcttta gcttttcgtt tccggattcc cgcttttgcg
     8881 ggaatgacga tggaagattg ttgttatttc ggataaatta ccctaacttt aaaatcccgg
     8941 attcccatct tcgggggaat aacaatattt tctatttcag cccatcattt gcgggggatt
     9001 ttatagagag tttatatttc aatatctcaa ataatgcaca aaagcatagc gcgtgccttt
     9061 gctgctgaca cggcgttccg tccgctctgc ttctttccaa tgcgtccggt ctattgcggg
     9121 gaaaaatgca tctccttcca cagacaaatc cacttcggtt atccgcaaat cggtcgccaa
     9181 tggcatcgct tgtccgtata tctgcgcgcc gcccataatg acggcttctt ccgcgcctgc
     9241 gcacaatgcc aatgccgcct ccaaacttgc cgccgtttcc gcgcctgccg cgcaataatc
     9301 cgcctgccgg ctgatgacga tgttcctccg tccgggcagg ggtttgacgg gcagggattc
     9361 ccacgttttc cgccccataa tgacgggttt gcccaaggta taggctttga aaaatgcgaa
     9421 atcttcgggg atgtgccaag gcatagcatt gcccgccccg atgcacaggt tttccgcaca
     9481 cgccgcaatt agggttattt tgagcatatt tcctccacaa aaatgccgtc tgaacgcttc
     9541 agacggcatt ttatgacatt ccgtgtcaaa aatctcaacc ggcgcgcgcc atacgttttt
     9601 tgtttgcacc tgccaacaat gccaacagtt cttcagtcgc gccccaaccg atacacgcat
     9661 cggtaatgct tttgccgtac acttccggct tatcctgtct gccttcgacc aaatggcttt
     9721 ccaccatcac gcccataata ttgctcccgt cctgttccaa ttgggcagca atatcttgtg
     9781 ccacttccat ctgccgggtg taatccttgc ggctgttggc gtggctgcaa tctatcatca
     9841 gcttatcggt tacccctgcc gcacgcagtt gttccgccgc ctcgctgacg tgtcccgcat
     9901 cataattcgg ctcttttccg ccgcgcaaaa tgacatgaca gtcgggattg ccgccggtat
     9961 ggacaatggc ggaatgtccg gccttggtta cagacaagaa atgatgcgaa tggctcgccg
    10021 caccgattgc gtcgatggca atcttcaaat tgccatccgt accgttttta aagccgacgg
    10081 ggcaggacag cccgcttgcc aattcgcggt gaacttggct ttcggtcgtc cgcgcaccga
    10141 ttgcccccca agaaatcaag tccgcataat attgcggcgt aatcatatcc aaaaactcgg
    10201 tagaggcagg catacccata ttgttcagcg acaacaacag gctgcgcgcc tgacgcaaac
    10261 cgaaattgat atcgaacgta ccgtccaaat gcgggtcgtt aatcaaacct ttccaaccca
    10321 ccgtcgtcct cggcttctcg aaataaacgc gcatcacaat caaaagctcg ttttcatact
    10381 gcttgcggag tttcaacaaa cgctccgcat attccaacgc cgctttcgga tcgtgaatcg
    10441 aacacggccc gataataacc aacagccgct tgtccctgcc gtgaaccaaa tcggaaattt
    10501 cctgacgggt gcggtgaacc aagcccgaag cctctttgga aatcggcagc tcgtaaagat
    10561 gggcaatcgg cggcaacaac tctttaactt ctttaatctt aatatcgtct gtggggtaat
    10621 ggtgtgtcat cttgcatctt tcctgatggt tttttatacg cggcttaggt tacatcgttt
    10681 accttgcaca aacaagtgca acatattact acaaagctat tttatttcaa aataactgat
    10741 atatcttttt tcatagattt taaatttcat atttttaata ttttaggaat tttattccaa
    10801 agaaaaagaa acagattgat aaaaacaata cccgccattc attcggacaa aaccgcacgg
    10861 aacatccgtt ttcccgtttc cacgacaatc cggtacagga caccccgctg ccgattccgc
    10921 ctgcacatcc ggcaaaattt catacgcaag gaaaatgttg aaaacaaaaa gaactaattg
    10981 cttgaaaaaa gatttaattg gaatgcgggt atttcccaca ctttctccat ttattcatcc
    11041 tcattatagg aagaaaaaca tgaaaaaacc ctgcttgcac tctcacttgc agccgtgtcc
    11101 gccgttacgg tagccgatat tcccgagtct aacggcaagg gcaaagccat catcggcgat
    11161 aaggaaaaac accgttacca agcatgaaaa ccttgctttg aaagtccatg gcgaaatccg
    11221 ccaagatttg ggggacggat gatccttgac cccttgggcg gatgcatatg cagatttgcg
    11281 cggcaaaacc aaagtgatga cgacccagat gggtgcttcc cgcgatgtca gcaaaagcgc
    11341 caaaggttgg agtgtcggta tcggtctgaa tgtaggcaaa cagttgaccg acagcgtcgg
    11401 tctcgagttt gatccatact accgtcacaa aacaatctac aaaccccgtg agattgtctt
    11461 ggacggtgac aaaaccaaaa tgggccgctc caaatccaac gagtacggct tccgcgtagc
    11521 cgcaacgttc tatagtcaat taaaatcaaa ataggacagt agtgcatcgt caaatcgggc
    11581 gtaatcagac aaaacggttc gcagataccg cttaatattc gcccacactt tctcaatcgg
    11641 gttga
//
LOCUS       DBBZXU010000060        11386 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.060, whole genome shotgun sequence.
ACCESSION   DBBZXU010000060 DBBZXU010000000
VERSION     DBBZXU010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 11386)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11386)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11386
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.060"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(426..1571)
                     /gene="dapE"
                     /locus_tag="ACJJDE_001363"
     CDS             complement(426..1571)
                     /gene="dapE"
                     /locus_tag="ACJJDE_001363"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HGG7541281.1"
                     /translation="MTETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEEL
                     HFGDTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADM
                     KTSIACFVTACERFVAEHPDHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYC
                     IVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQ
                     EVWDEGNKYFPPTSFQISNINGGTGATNVIPGELSVKFNFRFSTESTEAGLKQRVHAI
                     LDKHGVQYDLQWSCSGQPFLTHAGKLTDVARAAIAEICGVETELSTTGGTSDGRFIKA
                     IAKELIELGPSNATIHQINENVRLNDIPKLSAVYEGILARLLAGNAV"
     gene            complement(1684..2304)
                     /locus_tag="ACJJDE_001364"
     CDS             complement(1684..2304)
                     /locus_tag="ACJJDE_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate 1-dehydrogenase family
                     protein"
                     /protein_id="HGG7541282.1"
                     /translation="MLTSKSCDLFNIPFFQFSQLKKYQPESIPQIKADYKENWQVWQQ
                     LIQQVAAELGAPFAPPHIERWCNGWQVRAHFFAYFKYEQYKNSAAILSILLNRRRLSV
                     SLDWHCYKADVSPIALPEYNRWLDDFDTDKYAAFDMWHGAESEYDDYRTVAQQSESDR
                     KLQNDEDFFCIGKHIERDDLGKQDVAKWIAETVEDLLPLYEACHGK"
     gene            complement(2329..2838)
                     /locus_tag="ACJJDE_001365"
     CDS             complement(2329..2838)
                     /locus_tag="ACJJDE_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemerythrin domain-containing protein"
                     /protein_id="HGG7541283.1"
                     /translation="MNPFETKSVTFAEPIEMLYACHGKVRRFCGQVAMLSDYIAENGC
                     NQIVLQTIRQITRYFNVAAPLHHEDEEEDFFPLLLQYAPQAREGVDELLRQHIGLHDN
                     WAAVSAEFAKLEADNAYVPDAEAFKRFVAGYDVHLAIEEPLFDMGNTFIPKEKLTEIG
                     EIMAARRRK"
     gene            complement(2933..3484)
                     /gene="azu"
                     /locus_tag="ACJJDE_001366"
     CDS             complement(2933..3484)
                     /gene="azu"
                     /locus_tag="ACJJDE_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="azurin"
                     /protein_id="HGG7541284.1"
                     /translation="MKAYLALISAAVIGLAACSQEPAAPAAEATPAAEAPASEAPAAE
                     AAPADAAEAPAAGNCAATVESNDNMQFNTKDIQVSKACKEFTITLKHTGTQPKASMGH
                     NLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEEASLTLDPAKLADG
                     EYKFACTFPGHGALMNGKVTLVD"
     gene            complement(3765..4187)
                     /locus_tag="ACJJDE_001367"
     CDS             complement(3765..4187)
                     /locus_tag="ACJJDE_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HGG7541285.1"
                     /translation="MNLEQLGRRDALLSGLLKQAGQWRRLDAAVKKLLPANLHPHFQT
                     ACIEDGRLVLLAANNMAASRLKMIAPSVLPQLAGLDVSIRSVSVRLVPKPEKPPKTNT
                     LHLSKAALESFGSAAAKLEKRHPELAEALANLVRRHGA"
     gene            4319..7069
                     /gene="secA"
                     /locus_tag="ACJJDE_001368"
     CDS             4319..7069
                     /gene="secA"
                     /locus_tag="ACJJDE_001368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HGG7541286.1"
                     /translation="MLTNIAKKIFGSRNDRLLKQYRKSVARINALEEQMQALSDADLQ
                     AKTAEFKQRLADGQTLDGILPEAFAVCREASRRTLGMRHFDVQLIGGMVLHDGKIAEM
                     RTGEGKTLVATLAVYLNALAGKGVHVVTVNDYLASRDAGIMEPLYNFLGLTVGVIISD
                     MQPFDRQNAYAADITYGTNNEFGFDYLRDNMVTDQYDKVQRELNFAVVDEVDSILIDE
                     ARTPLIISGQADDNIQLYQIMNTVPPHLVRQETEEGEGDYWVDEKAHQVILSEAGHEH
                     AEQILTQMGLLAENDSLYSAANIALMHHLMAALRAHSLFHKDQHYVIQDGEIVIVDEF
                     TGRLMSGRRWSEGLHQAVEAKEGVEIKRENQTLASITFQNYFRLYTKLSGMTGTADTE
                     AFEFQSIYNLETVIIPTNRPVQRKDFNDQIFRSAEEKFEAVVKDIEECHKRGQPVLVG
                     TTSIENSELVSHLLQKAGLPHNVLNAKEHEREALIVAQAGKVGAITVATNMAGRGTDI
                     VLGGNLKHQTDAIRADETLSDEEKQAQIAALENGWQAEHDKVMEAGGLHIIGTERHES
                     RRIDNQLRGRSGRQGDPGSSRFYLSFEDPLLRLFALDRAAAILNRLAPERGVAIEHNL
                     LTRQIEGAQRKVEGRNFDMRKQVLEYDDVANEQRKVIYSQRNEILTSKDISDLMQEIR
                     SDVVSDLVDTYMPPDSMEEQWDIPTLENRLAAEFRLHEDIQSWLKADNAIDGQDIKER
                     LIERIENEYAAKTELVGKQAMADFERNVMLQVIDNQWREHLAAMDYLRQGIHLRSYAQ
                     KNPKQEYKREAFTMFQDLWNGIKFHIASLLTSVQIEQNPVAVVEEQPIGNIQSIHSES
                     PDMEELLGQSQTDLVTEAFNPDGTDFSPEALEARGQIVHRNDPCPCGSGLKYKQCHGK
                     LA"
     gene            7213..8985
                     /gene="dnaG"
                     /locus_tag="ACJJDE_001369"
     CDS             7213..8985
                     /gene="dnaG"
                     /locus_tag="ACJJDE_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HGG7541287.1"
                     /translation="MIPSDFIDELLAKTDIVDIIDEQVPLKKGGANYMACCPFHKEKT
                     PSFSVSPTKQFYHCFSCGAHGSAIGFVMEHQGLSFPEAVQFLADRVGMIVPKVRGQND
                     NPEVRAERKKKQQTLEETTAEAADFYAQQLKFNPTAKAYLDKRGLSAEVIAHYGLGYA
                     PDGWQPLAQVFQPYPNTALVDTGMVIDNEGRYYDRFRHRIMFPIRNPRGQVIGFGGRV
                     LDDSKPKYLNSPDTPLFDKGKNLYGLYEGRAAVKEVGRILVVEGYMDVVALAQFGVGY
                     GVAALGTATTAEHVKILMRQADSIYFCFDGDSAGRKAAWRALENALPQLKDDKSLHFL
                     FLPEEHDPDSYIRAYGKAQFEDALLNQSKPLSEYFWEHLSDGIHLNTQEGKAELVKTS
                     SPLLAQITAPALAYLLKQRLSELVGIDPDNLAQLLGQEAPKRHVKQKNYKLPPISVKQ
                     PVMPTLVQRQIRSLLINPDWAAYIDLPDYLALDGDFACLANLAETIKNHPSVPATAQV
                     LEHMRGSPYEETITRIFHSTHQSEEMNSSSEEDCENFQIGMKKLLNELKYSQIETLKQ
                     KSLQSGLNESEKKLLLSLLTAKQN"
     gene            9171..11099
                     /gene="rpoD"
                     /locus_tag="ACJJDE_001370"
     CDS             9171..11099
                     /gene="rpoD"
                     /locus_tag="ACJJDE_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HGG7541288.1"
                     /translation="MSRNQNHEEYQDDARPLTIEEQRARLRQLIIMGKERGYITYSEI
                     NDALPDDMSDADQIDNIVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAA
                     LSSADSEFGRTTDPVRMYMREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSI
                     AEILELIEKIRKDEIRVDEVVEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENED
                     DEESEEDADEISAANLAELKQKVIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAI
                     ANKLLEVRFATRQIDSLSSSLRGKVENIRKLEREIRDICLDRVHMERDYFIQNFLPEI
                     TNLEWIEEEIAKGRVWSDALDRFRHAILEKQTELADMEKETRISIEELKEINKNMVSS
                     EKETAAAKQEMIQANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
                     FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQHLQETGEEPDSAKLA
                     ELMQMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDANNVAPADAAMYTSLHE
                     VTKEILESLTPREAKVLRMRFGIDMNTDHTLEEVGRQFDVTRERIRQIEAKALRKLRH
                     PTRSDRLRSFLDSEDSKL"
     gene            11246..>11386
                     /locus_tag="ACJJDE_001371"
     CDS             11246..>11386
                     /locus_tag="ACJJDE_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541289.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDRVIDWQPIEQYLNRQKTR
                     YLR"
BASE COUNT         2989 a         3166 c         2794 g         2437 t
ORIGIN      
        1 ggattgccgt tgaaataaat cgctctacat aaaaaatcaa tgtgttatct caaacccacg
       61 ttaggtctaa taaaatggtc ggacatccgt atccgacagc ccatcttctt ttcagacggc
      121 attgcaaatt taagtttgac gtgcgttcaa aataaggcag ttaatgcgaa gcgaaattcc
      181 gtcggcgtac ctgcaacttg actccctccc ctgtggggga gggttgggga gagggtaaaa
      241 cggggcagat acagacaata tttccgttac cgccccgatg ccctctccct aaccctctcc
      301 cacgggagag ggaatggatt gccgttgaaa taaatcgctc tacataaaaa atcaatgtgt
      361 tatctcaaac ccacgttagg tctaagcaaa tggtcggaca tccgtatccg gcaagcaagc
      421 tgctttcaga cggcatttcc agccaacaac cgcgccaata tcccctcata caccgcagac
      481 agcttcggaa tgtcgtttag ccgcacgttt tcgttgattt ggtggatggt cgcattggac
      541 gggcctaatt cgatgagttc ttttgcaatg gctttgatga agcgtccgtc cgaagtgccg
      601 ccggtggtgg acaattcggt ctctacgccg cagatttcgg caatggcggc gcgtgccacg
      661 tcggtcagtt tgcccgcgtg ggtcaggaag ggctgccccg aacacgacca ctgcaaatcg
      721 tattgcacac cgtgtttgtc caaaatggcg tggacgcgtt gtttcagccc tgcttcggtg
      781 gactcggtgg agaagcggaa attgaatttg acgctcagct cgcccggaat gacattggtc
      841 gcgcctgtac cgccgttgat attggaaatt tgaaagctgg tcggcgggaa gtatttgttg
      901 ccttcgtccc agacttcctg cgtcagctct aacaaggccg gggcaaaagt atgcacggga
      961 ttgattgcca aatgcggata ggcaatatgg ccttgcttgc ctttgacggt caggttgccc
     1021 gacagcgagc cgcgccggcc gtttttaatc atatcgccca atttgtccac ggctgtcggt
     1081 tcgccgacga tgcagtagtc gataagctcg tcgcgcgctt tcaatacatc gacgactttg
     1141 gtcgtgccgt ccaacgcgtc gccctcttcg tcggaagtaa tcagaagcgc aatgctgcct
     1201 tggtggtcgg gatgttcggc aacgaagcgt tcacaggcgg taacgaagca ggcgatgctg
     1261 gttttcatgt ctgccgcgcc gcgcccgtat aatcttccgt cgcgctcggc cggttcgaac
     1321 gggggcgaat cccatttttc gacaggacct gtcggtacaa cgtcggtatg ccctgcaaaa
     1381 cagacgacgg gagctttcgt gccgcgtcgc aaccagatgt ttttggtgtc gccgaaatgg
     1441 agttcttcag ccgcaaaacc gattttgtgc aggcgttcgg caaggagttt ttggcaatcc
     1501 ctgtcgtcag gggtaacgga tggtcgggaa atcagctctt tggcaagctc tagggattga
     1561 gtttcggtca tatttgttca cttttgaaat tagaccgtct gaaacgttct gaatgtgatt
     1621 ttcagacggc atttaggtta ggttggcata cggggtgggt attttaccca tcagtcttct
     1681 gaatcatttg ccgtggcagg cttcgtaaag cggcagcaaa tcttccaccg tttccgctat
     1741 ccatttcgcg acatcctgct tgcccaaatc gtcgcgctcg atgtgtttgc cgatgcagaa
     1801 aaagtcttcg tcgttttgca actttcggtc ggattcgctt tgttgtgcga cggtgcggta
     1861 gtcgtcatat tcgctttccg cgccgtgcca catatcgaat gcggcgtatt tgtcggtatc
     1921 gaaatcatcc aaccagcggt tgtattcggg cagcgcaatc ggcgacacgt cggctttgta
     1981 gcagtgccaa tccaagctga cgctcaggcg gcggcggttc aataaaatcg ataaaatcgc
     2041 ggcggaattt ttatattgtt cgtatttgaa gtaggcaaag aaatgggcgc gcacctgcca
     2101 gccgttacac cagcgttcga tatgcggcgg cgcgaacggc gcacccaatt cggcggcaac
     2161 ctgctggatc agctgctgcc atacctgcca gttttcttta tagtctgcct tgatttgcgg
     2221 aatgctttca ggctggtatt ttttaagctg ggaaaattgg aaaaacggga tattgaacaa
     2281 atcgcaactt ttcgaggtaa gcatagtgta ttccttgaga cgattacctt atttgcgccg
     2341 acgcgccgcc atgatttcac cgatttcggt cagtttttct ttagggataa aggtgttgcc
     2401 catatcaaac agcggctctt caatcgccaa atgaacatca tatcccgcca caaaacgttt
     2461 gaacgcttcc gcatcgggaa cataagcatt gtctgcttcg agcttggcaa attcggcgga
     2521 aacagccgcc cagttgtcgt gcagcccgat atgttggcgt aaaagctcgt ccacaccttc
     2581 acgtgcttgc ggcgcgtatt gcagcagcag cgggaaaaag tcttcttctt cgtcctcatg
     2641 atgcagcggc gcggcaacgt tgaaataccg ggtgatttgg cggatggttt gcaaaacaat
     2701 ttgattgcag ccgttttcgg cgatgtagtc cgacagcatg gcgacttgtc cgcaaaaacg
     2761 gcgcactttg ccgtggcagg catacagcat ttcaatcggt tcggcaaagg taacgctttt
     2821 ggtttcaaac ggattcatgt tttcgttctc aacgggcact tttcaagcag tcattttata
     2881 ataaaacagc ctgcacaaag caggctgtcc gtcttttgag actttaagcg gattaatcga
     2941 ccaaagtcac tttgccgttc atcaaagcac cgtgacctgg gaaggtacaa gcgaatttat
     3001 attcgccgtc ggccaattta gcaggatcca gagtcaggga agcttcttcg ccgccgccga
     3061 tcagtttggt atgggcaaca acgcgtgcat catcaggttt gacatagtcg gtatcggcag
     3121 cacctacgcc gtctttaaat acgccgtcca tgtcttcagc tttggcaatc acgagattgt
     3181 gacccatgct ggctttgggt tgcgtaccgg tatgtttcag agtgatggta aactctttac
     3241 atgctttgct gacttggatg tctttggtgt tgaactgcat attgtcgttg gattcgacag
     3301 ttgccgcaca gttgccggca gcaggggctt cggcagcatc tgcaggagca gcttcggcgg
     3361 caggcgcttc ggaagcgggt gcttcagcag caggagttgc ctcggcagca ggcgcggcag
     3421 gttcttgaga gcaggcagcc aaaccgataa cggcggcaga aatcagagcc agatacgctt
     3481 tcataacaaa tctccaatcg ataaaataat attcggtttt acggaaatca aagtgcaacc
     3541 gccattaaca aaaccttgaa aaagattccg ccgcgttgca caaacagatg tttcggagcg
     3601 gcattttgct acaaatttca tttgaaatca aagcctgtct gcaagtttac aatcgtttac
     3661 tttaaaaggg gcaattttac cccgaaccta tttctttagt attagaccca ttatccttta
     3721 cttcttaata ttaacggatg tttacacaaa ttcccgtata cattttatgc gccatgcctt
     3781 ctaaccaagt ttgccaatgc ctccgccaat tcgggatgcc gtttttccaa ctttgccgcc
     3841 gccgaaccga aactctccag cgcagcctta ctcaaatgca gggtattggt tttcggcggt
     3901 ttttccggtt tcgggaccag cctgaccgaa acagagcgta tcgaaacatc aagccctgcc
     3961 aactgcggca ataccgacgg tgcaatcatt ttcaaacgcg atgccgccat attgtttgcc
     4021 gccaaaagga caagcctgcc gtcttcgata catgccgtct gaaaatgcgg gtgcaggttg
     4081 gcaggcagca gttttttcac ggcggcatcc aaccgccgcc actgtcccgc ctgtttcaaa
     4141 agtccggaaa gcagcgcgtc ccgcctgccc aactgttcca aattcataaa acatacaccc
     4201 aaaaagattg aaataccgca aacgcgcctt tatttcagac ggcattagca ctttgcacaa
     4261 acgcttgtgt taaaatcgcg ttttcgcccc actattatat caggcgcagg aattattcat
     4321 gctgacaaac attgccaaga aaatcttcgg cagccgcaac gaccgcttgc tgaaacaata
     4381 ccgtaaatcc gttgccagaa tcaacgcgct cgaagaacag atgcaagccc taagcgatgc
     4441 tgatctgcaa gccaaaactg ccgaattcaa acaacgcctc gccgacggtc agactttgga
     4501 cggcattttg cccgaagcct tcgccgtctg ccgcgaagcg tcccgccgca ccctcggtat
     4561 gcgccacttc gacgtgcagc ttatcggcgg tatggtgctg cacgacggca aaatcgccga
     4621 aatgcgtacc ggcgaaggca aaaccctggt cgccaccctc gccgtctatc tcaacgcgct
     4681 ggccggcaaa ggcgtacacg tcgttaccgt caacgactac ctcgcctcac gcgatgcggg
     4741 cattatggag ccgctctaca atttcctcgg ccttaccgtg ggcgtgatta tttcagatat
     4801 gcagccgttc gaccgtcaaa acgcctatgc cgccgatatc acctacggca ccaataatga
     4861 attcggcttc gactacctgc gcgacaatat ggttaccgac caatacgaca aagtgcagcg
     4921 cgaattgaat tttgccgttg tcgatgaagt ggattccatc ttgattgacg aagcgcgcac
     4981 tccgctgatt atctccggtc aggcggatga caacatccag ttgtaccaaa tcatgaacac
     5041 cgttccgccc cacctcgtcc gtcaagagac agaagaaggc gaaggcgact attgggtcga
     5101 cgaaaaggca catcaggtca tcctgagcga agcaggtcac gaacacgccg agcaaatcct
     5161 gacccaaatg ggattgctgg cagaaaacga ctccctctat tccgccgcca atatcgccct
     5221 gatgcaccac cttatggcgg cattgcgcgc gcattccctc ttccacaaag accaacatta
     5281 cgtcatccaa gacggcgaaa tcgtcatcgt ggacgaattc accggccggc tgatgtccgg
     5341 ccgccgctgg tcggagggtc tgcatcaagc cgtcgaagcc aaagaaggcg tggaaatcaa
     5401 acgcgaaaac caaacccttg cctccatcac cttccaaaac tatttccgcc tgtacaccaa
     5461 gctctccggc atgaccggca cagccgatac cgaagctttc gagttccaaa gcatctacaa
     5521 cctcgaaacc gtcatcatcc cgaccaaccg ccctgtacag cgcaaagact tcaacgacca
     5581 gattttccgt tccgccgaag aaaaattcga agccgtcgtc aaagacatcg aagaatgcca
     5641 caaacgcggg cagcccgtcc tcgtcggcac caccagcatc gaaaactccg aactggtctc
     5701 ccaccttctg caaaaagccg gactgccgca caacgtcctc aacgccaaag aacacgaacg
     5761 cgaagccctg attgtcgccc aagccggcaa agtcggcgcg attaccgttg ccaccaatat
     5821 ggcgggacgc ggtacggaca tcgttttagg cggcaacctg aagcaccaaa ccgatgccat
     5881 ccgtgccgac gaaaccttga gcgacgaaga gaaacaggca caaatcgccg cactcgaaaa
     5941 cggctggcag gcagaacacg ataaagtaat ggaagcaggc ggcctgcaca tcatcggtac
     6001 ggaacgccac gaaagccgcc gtatcgacaa ccaattgcgc ggacgttccg gccgtcaggg
     6061 cgaccccgga tccagccgtt tctacctttc gtttgaagac ccgctgctgc gcttattcgc
     6121 actcgaccgc gccgccgcca tcctcaaccg tctcgccccc gaacgcggcg tcgccatcga
     6181 acacaacctg ctgacgcgcc aaatcgaagg ggcgcaacgc aaagtcgaag gcagaaactt
     6241 cgatatgcgc aaacaggttt tggaatacga cgacgttgcc aacgaacagc gcaaagtcat
     6301 ttacagccag cgcaacgaaa ttctgaccag caaagacatc agcgacctga tgcaggaaat
     6361 ccgttctgat gtcgtcagcg acctcgtgga tacctatatg ccgcccgaca gcatggaaga
     6421 acaatgggac atcccgactt tggagaaccg tctggctgcc gaattcagac tgcacgaaga
     6481 catccaatcc tggctgaagg cggacaatgc gattgacggt caagacatca aagaacgcct
     6541 gatcgaacgc atcgaaaacg aatatgccgc caaaaccgaa ctggtcggca agcaggcaat
     6601 ggccgatttc gagcgcaacg tgatgttgca ggtcatcgac aaccaatggc gcgaacacct
     6661 cgccgctatg gactacctgc gacaaggcat acacctgcgc agctatgccc aaaaaaatcc
     6721 gaagcaggaa tataaacgtg aagcctttac catgttccaa gacctgtgga acggcatcaa
     6781 attccatatt gcctccctgc ttacctcggt tcaaatcgaa caaaaccctg tcgcggtggt
     6841 tgaagagcaa cccatcggca acatccagtc catccattcc gaatcgcccg atatggaaga
     6901 acttttgggt cagtcgcaaa ccgatttggt taccgaggcc tttaatcccg atggaacgga
     6961 tttcagcccc gaagccttgg aagcgcgggg acaaatcgtc caccgcaacg acccctgccc
     7021 ctgcggcagc ggtttgaaat acaaacaatg ccacggcaaa ctggcttgag cgtttgaacg
     7081 caaatgccgt ctgaacatcc ggtttccggc ttcagacggc attttgcctg aaccgccaca
     7141 tccgaccgcc attccgaaaa atcccgattt cgtaccgtcc aaactaaaaa caggcatccg
     7201 ccccgccgaa ctatgattcc atccgacttc attgacgaac ttctggccaa aaccgatatt
     7261 gtcgacatca tcgacgaaca ggttccgctg aaaaaaggcg gggcgaacta tatggcgtgt
     7321 tgcccgttcc acaaggaaaa aacgccgtcg ttttcggtca gtccgaccaa gcagttttac
     7381 cactgtttca gttgcggggc gcacggttcg gcgattggtt ttgtgatgga acatcagggg
     7441 ctgtcgtttc cggaggcagt gcagttcctt gccgaccgcg tgggtatgat tgtgcctaaa
     7501 gtgcgcgggc agaacgataa tcccgaagtc cgtgccgaac gtaagaaaaa gcagcagacg
     7561 ctggaagaaa cgacagcgga ggcggctgat ttttatgcgc aacagttgaa attcaatccg
     7621 acggcgaagg cttatttgga caagcgcggc ttgagcgcgg aagtcatcgc gcattatggt
     7681 ttgggctacg cgcccgacgg ctggcagcct ttggcgcaag tattccaacc gtacccgaat
     7741 accgcgttgg tggatacggg tatggtgatt gacaatgagg ggcggtatta cgaccgattc
     7801 cgtcatcgga ttatgttccc catccgcaat ccgcgcgggc aggtcatcgg tttcggcggc
     7861 agggtgctgg acgactccaa acccaaatat ctaaactctc ccgatacgcc tttgtttgat
     7921 aaggggaaaa acctttacgg cttgtatgaa gggcgtgctg ctgtcaagga agtggggcgg
     7981 attctggtgg tcgaaggcta tatggacgtg gtcgcgctgg cacagttcgg cgtgggctac
     8041 ggcgtggcgg ccttgggcac ggcaacaaca gcggaacacg tcaaaatcct gatgcgtcag
     8101 gcggacagta tttatttctg tttcgacggc gacagcgcgg ggcgcaaagc ggcttggcgc
     8161 gcgctggaaa acgcgctgcc gcagttgaag gacgacaaat cgctgcattt tttgttcctg
     8221 ccggaagaac acgaccccga cagttacatc cgtgcctacg gcaaagcgca atttgaagac
     8281 gcgcttctga atcaaagcaa gcctttgtcg gagtatttct gggaacacct ttcagacggc
     8341 attcatctca atacgcagga aggcaaggcg gaattggtga aaaccagttc gccgcttttg
     8401 gcgcagatta ccgcgccggc attggcttat ttgttaaaac aacggcttag cgaactggtc
     8461 ggcatcgacc ccgacaacct cgcgcaactg ctgggacagg aagcgccgaa gcggcacgtc
     8521 aaacaaaaaa actacaaact gcccccgatt tccgtcaaac agcccgttat gccgacattg
     8581 gtgcaacggc aaatccgcag cctcttgata aatccggatt gggctgcata tatagacctg
     8641 cccgattatc tggcgttgga cggcgatttc gcctgccttg ccaacctcgc cgaaaccatt
     8701 aaaaaccatc cttccgtgcc ggcaaccgca caggttttgg aacatatgcg cggctcgcct
     8761 tacgaagaaa cgataacccg aatcttccat tcaacgcacc aatcggaaga aatgaacagc
     8821 agcagtgaag aagattgcga gaatttccaa atcggcatga aaaaactgct caatgagtta
     8881 aaatacagcc aaatcgaaac attaaaacaa aaaagcctgc aatccggctt aaatgaaagc
     8941 gagaaaaaac ttttgctgtc gctgctgacc gcaaaacaaa attgaccggc ggattccgcc
     9001 atccgtaaac cgttatgccg tctgaaaagc acttaccccg gctgcaacaa cgacacctgc
     9061 agaacaccca tcccaaaaag ccttcagacg gcatcagagt acccgctctg ccacgccttc
     9121 aggtgcgttc aaacgcaaac cgtcggcacc ttaccaacag aaagcagaca atgtccagaa
     9181 accaaaatca cgaagaatac caagacgatg cccgccccct gacgattgag gaacaacgcg
     9241 ctcgcctgcg ccaactcatc attatgggca aagaacgcgg ctacatcacc tactccgaaa
     9301 tcaacgacgc actgcccgac gatatgtccg atgccgatca aatcgacaac atcgtcagta
     9361 tgatttccgg tttgggtatc caagttaccg aacacgcccc cgatgcggaa gacatattgt
     9421 taagcgacaa tgccgccgtt accgacgatg atgccgtcga agaagccgag gccgcccttt
     9481 ccagcgcaga ttccgagttc ggcaggacga ccgaccccgt ccgtatgtat atgcgcgaaa
     9541 tgggacaggt cgacctgctg acccgcgaag acgaaatcat catcgccaaa aaaatcgaaa
     9601 acgccctgaa aaatatggtt caggccatct ccgcctgccc gggttccatt gcggaaatct
     9661 tagaactcat cgaaaaaatc cgcaaagacg aaatccgcgt cgacgaagtc gtagaagcca
     9721 ttatcgaccc gaatgaagta ttgctcaacg aattgggctt ggggcacttg gaaaccacag
     9781 cacccgagaa accttccaac gacaattcgg acgaaaacga agacgacgaa gaatcggaag
     9841 aagatgcgga tgaaatctcg gcagccaatc tcgccgaatt gaaacaaaaa gtcatcggcc
     9901 actttgccca aatcgaaaaa gactacaaaa aaatgattgg ccgtttggaa aaacaccaca
     9961 gccggcacaa agactatctc gcctaccgcg acgcgattgc caacaaactt ttggaagtcc
    10021 gcttcgccac ccggcaaatc gacagcctca gcagcagcct gcgcggaaaa gtagaaaaca
    10081 tccgcaaact cgaacgcgaa atccgcgaca tctgcctcga ccgcgtccat atggagcgcg
    10141 actacttcat ccaaaacttc ctgcccgaaa tcaccaatct ggaatggatt gaagaagaaa
    10201 tcgccaaagg cagggtttgg agcgacgcgc tcgaccgctt ccgccacgcc atcctcgaaa
    10261 aacaaaccga gttggcggat atggaaaaag aaacccgcat ttccatcgaa gagttgaaag
    10321 aaatcaacaa aaatatggtg tcaagcgaaa aagaaaccgc agctgccaaa caggaaatga
    10381 ttcaggcaaa cttgcgcctc gtcatttcca ttgccaaaaa atacaccaac cgtggcttgc
    10441 agttccttga tttgattcag gaaggcaaca tcggcctgat gaaagcggtc gacaagttcg
    10501 aataccgacg cggctataag ttctccacct acgcaacctg gtggatccgt caggcaatca
    10561 cccgctcgat tgccgatcag gcgcgtacca tccgcattcc ggtacatatg attgaaacca
    10621 tcaacaagat gaaccgcatc tcgcgccaac accttcaaga aaccggcgaa gaacccgatt
    10681 ccgccaaact tgccgaactg atgcagatgc ccgaagacaa aatccgcaaa atcatgaaaa
    10741 tcgccaaaga gccgatttcg atggaaaccc ccatcggcga cgacgacgat tcgcacttgg
    10801 gcgacttcat cgaagatgcc aacaatgttg cgccggccga tgcggcaatg tacaccagcc
    10861 tgcacgaagt aaccaaagaa atcctcgaaa gcctgacacc gcgtgaggca aaagtcctgc
    10921 gtatgcgttt cggcatcgat atgaacaccg accacacgct ggaagaagtc ggcagacagt
    10981 ttgacgtaac gcgcgaacgc atccgacaaa tcgaggcaaa agcactccgc aaattacgcc
    11041 atccgacaag aagcgaccgt ttgagaagtt tcttggacag cgaagacagc aagctgtaaa
    11101 ccaaaaaacc gcaggtttca aatacctgcg gttttttctt acacaataaa caacgcttcc
    11161 acatatccca cactcctatc ccgagacctt tgcaaaattc cccaaaatcc cctaaattcc
    11221 caccaagaca tttaggggat ttctcatgag caccttcttc cggcaaaccg cccaagccat
    11281 gattgccaaa cacatcgacc gtttcccgct attgaaattg gaccgggtga ttgattggca
    11341 gccgatcgaa caatacctga atcgtcaaaa aacccgttac cttaga
//
LOCUS       DBBZXU010000061        10899 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.061, whole genome shotgun sequence.
ACCESSION   DBBZXU010000061 DBBZXU010000000
VERSION     DBBZXU010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10899)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10899)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10899
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.061"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            20..1417
                     /gene="aspA"
                     /locus_tag="ACJJDE_001372"
     CDS             20..1417
                     /gene="aspA"
                     /locus_tag="ACJJDE_001372"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008797 - aspartate ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HGG7541290.1"
                     /translation="MTVRIEHDLLGDREIPAEVYWGIHTLRAIENFKISTQKISDVPQ
                     FVRSMVMVKKATAQANGELGAVKPEIAAAIEKACDEVLLNNRCLDQFPSDVYQGGAGT
                     SVNMNTNEVIANLALEVLGYEKGRYDIVNPMDHVNASQSTNDAYPTGFRLAVYYSIGE
                     LLDKLTVLKNAFAAKAEEFKDVLKMGRTQLQDAVPMTAGQEFQSFQVLLEEEILNLDR
                     TRQLLLEVNLGATAIGTGVNTPKGYAELVVKKLSEVSGLPCKLTENLIEATSDCGAYV
                     MVHGALKRTAVKLSKICNDLRLLSSGPRAGLKEINLPELQAGSSIMPAKVNPVIPEVV
                     NQVCFKVIGNDTTITFAAEAGQLQLNVMEPVIAQCMFETISLLGNAAVNLSDKCVKGI
                     TVNREICERYVFNSIGLVTYLNPYIGHHNGDLVGKICAQTGKGVREVVLERGLLSEEE
                     LNRILSPENLMNPHL"
     gene            complement(1489..2364)
                     /locus_tag="ACJJDE_001373"
     CDS             complement(1489..2364)
                     /locus_tag="ACJJDE_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA/RhaT family transporter"
                     /protein_id="HGG7541291.1"
                     /translation="MAYLLISIVFSVSVSILLKMARKKKIDIAQAVAVNYVVAVILTL
                     LVLKPDIGNIGAFLPTWPLFAALGVLLPSVFVIMGKSVEAAGIVKSDAAQRLSLFLPI
                     VAALTLFGEKLSEGKLIGLCLAFAALFCLLWKHSGGKKSGSAWRQAALLLGVWAGYGI
                     IDILFKQLAKSGTAFAGNLLVAFVLAGVLMFACLFAKSVRWRVESVVGGIFLGGLNFM
                     NIVTYITAHQMMKDNPTLVFAGMNIGVIVLGTLSGALFFKEKINTINTAGIVLALCSI
                     ACLFYWGEVKVLFGI"
     gene            complement(2366..3088)
                     /locus_tag="ACJJDE_001374"
     CDS             complement(2366..3088)
                     /locus_tag="ACJJDE_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HGG7541292.1"
                     /translation="MDKDLYAVLGVSPQAGADEIKRAYRKLAMKYHPDRNPGNPKAEE
                     KFKEIQRAYDTLSDLSKRMQYDASFRRHEERGRQEEAFRREQARREQFYREQMRREQA
                     FRQAFERQASRSCHTYEPSGGGSGRNYVLAAYILFGLGAIMLFMPIVGVIFAYMPIVG
                     VILAYMKRNSLDSIVYAAHTEYLIKTFWRTFWLYILGALTALLGIGVLIIIATNVWYF
                     YRIIAGFIRFNGGRAVAPEKWI"
     gene            complement(3111..3590)
                     /gene="ybaK"
                     /locus_tag="ACJJDE_001375"
     CDS             complement(3111..3590)
                     /gene="ybaK"
                     /locus_tag="ACJJDE_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HGG7541293.1"
                     /translation="MSKHTYPITPAVRVLRENGIEFEPFTYAYEEHGGTAQFARLFGK
                     DEHLVIKTIVLQDENGKGLIVLMHGDKQISTRNLARHLGAKHIEPATPVQANKWTGYL
                     VGGTTPFGIRTKLDIYVEQSVMDLETIYINGGKRGFIIGIRPGDLNILNPKTIQAAV"
     gene            3665..4027
                     /locus_tag="ACJJDE_001376"
     CDS             3665..4027
                     /locus_tag="ACJJDE_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7541294.1"
                     /translation="MDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLA
                     QIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARP
                     EWRVEIKITAVKKDAATA"
     gene            4062..4925
                     /locus_tag="ACJJDE_001377"
     CDS             4062..4925
                     /locus_tag="ACJJDE_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein YgfZ"
                     /protein_id="HGG7541295.1"
                     /translation="MKTLLPFFGVVRVSGEDRQTFLHGQLSNDINNLQTGQACYATYN
                     TPKGRVIANMIVVNRGGDLLLIMAQDLLEATVKRLRMFVLRAKAVFEILEDYAVGAEL
                     EASAEPLAAQEPNLAFAAQQDSDGICSIALPHGGILRIAPKNTLPPYDAAAENAWRLH
                     EIRSGYPWICAATKETAVAQMLNQHIIGGVHFKKGCYPGQEIIARAQYRGQVKRGLAV
                     LSGNSAVEAGTLLTADGEEAGIVLDSVQDSENFTALAVIKFSAAQKELAAPNGGIFKA
                     VHLFFKTENAE"
     gene            5019..5978
                     /gene="ttcA"
                     /locus_tag="ACJJDE_001378"
     CDS             5019..5978
                     /gene="ttcA"
                     /locus_tag="ACJJDE_001378"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HGG7541296.1"
                     /translation="MSKKTKQELENNKLSKRLRHAVGDAINDFNMIEPDDKIMVCLSG
                     GKDSYALLDILRQLQASAPIDFQLVAVNLDQKQPGFPEEVLPTYLESIGVPYKIVEED
                     TYSTVKRVLDEGKTTCSLCSRLRRGILYRTAKELGCTKIALGHHRDDILATLFLNMFY
                     GGKLKAMPPKLVSDNGEHIVIRPLAYVKEKDLIKYAELKQFPIIPCNLCGSQPNLQRQ
                     VIGDMLRDWDKRFPGRIESMFSALQNVVPSHLADTELFDFVGLERGQTLKHGGDLAFD
                     SEKMPERFSDGSEEDESEIKIEPQKAERKVINILANKPKTCGA"
     gene            complement(6072..9011)
                     /locus_tag="ACJJDE_001379"
     CDS             complement(6072..9011)
                     /locus_tag="ACJJDE_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III restriction-modification system
                     endonuclease"
                     /protein_id="HGG7541297.1"
                     /translation="MSGFNYEKNQPHQMRAVSAVLGVFDGATPKYRAADENPELLFAA
                     KQYADNILKVQSQNGIDGRFPDRSDDQNILDISMETGTGKTYTYTQTMFELHRWLGVF
                     KFIVVVPTLSIKAGTRQFLQSKALAEHFEQDFGGDYEGVRLKTYVVESAKKNKGKKSN
                     APITIEQFAKAENKKEIHVLLINAGMVNSSSMNDTGDKALKDLFDNPVDALAAVRPFV
                     IVDEPHKFPTRESAKTWGNIKRLKPQYILRYGATFNDEYYNLLYRLTAVDAFNDGLVK
                     GVRVFQEEMQGGMDAAVKLVSSGGKEAKFELNEKDKKQTFKLAKGEDLAKIHPAVSDL
                     KIDKMNKTVVVLSNGLELKTGAVINPYSYSQTVQDAMMQRAVAEHFKLERALLAERAP
                     QPKIKPLTLFFIDDIAGYRSGNELSGSLKDKFESWIHAEAARRLKTESDPFYRDYLQK
                     TLDDVSACHGGYFSKDNTDSDDRIEQEINEILHDKEKLLSLDNPRRFIFSKWTLREGW
                     DNPNVFQICKLRSSGSTTSKLQEVGRGLRLPVNELMARVRDVPYKLNYFVDSSEKDFV
                     KQLVGEINDNSFQEEISKKFTEELKQKILQKYPDIKPLGLLNKLFSDGIIDDNENFTE
                     DGYDKLKAAYPEAFPKGLDKGKVSNAKDEGKDTIIMREGKYEELKALWELIHHKAVLQ
                     YKIKDEAEFVDLFTAYLRENAAKFPQAGIRTAVNEAYINNGLMLSRRIDSFEDEDFIR
                     FNTMTYRELLEKLAQTAKIRMQTLHQAFYRVRNELNIGDFLNMQTIAQIKNGFNRFLL
                     HHSFHKFELDYQLVGSKIHPTKFTDKDGKPRAVKKADLGRFEDTEHRPAAGYLFDEIF
                     YDSDIEHENVANNQIEGVTVFTKIPRNSIKIPVAGGGTYSPDFAYIVKTQSGEILNFV
                     IEAKGTDGAEDLRKSEERKIKHAEKLFAEISKEIKVVFKTQFDGERIAELIGQNMPAG
                     GHSENGH"
     gene            complement(9024..>10899)
                     /locus_tag="ACJJDE_001380"
     CDS             complement(9024..>10899)
                     /locus_tag="ACJJDE_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA methyltransferase"
                     /protein_id="HGG7541298.1"
                     /translation="DTAGVNTEAIYTSDGITANSTQLEQLKKLFPACFDADGNFLIDR
                     LQAEIAPQTDIGREFYEMNWLGKSYARLLRNLPPETLISEDKTHNAKPENAGSQNLLI
                     RGDNLEVLKHLKNAYTNSVKMIYIDPPYNTGSDGFVYQDDRKFTPAELACLANIDEDE
                     AARILDFTDKGSNSHSAWLTFMYPRLYIARELLKDDGVIFISIDDNEAAQLKLLCDEV
                     FGEGNFIKDLIVNTSEGGGNAKYVVNGHETVLVYAKDITHFDNLKRPKDIRGKKIVIN
                     DELYWIQEDAVREQFGKYGNLHYEDIIEIKGIEFKNKIDKDIENNEYILIPKSYGKTI
                     IGKLRKVSDDFSKFHSILNIGNISKNLTKDGIRELEELFETGKGYSPFETPKPLDLLK
                     RLVLSATFKGNQTDLILDFFAGSGTTAHAVMQLNAEGQNGNRRYICVQLPEKTAEKSE
                     ARKAGYPTIFDITKARIEKAAAKIRVEHPDYTGDSGFKIFQTADNFRQHPDKDFSPEQ
                     PDLPLNDELSEEQLQTLLTTWTLYDGAALTTPVEPVRLGAYTAYLCEKRLYLMNAGFT
                     SADLLAFIRKLDDDADFNPNRVIVFGSNMASAMQHELDQAVRGYANKKEIELNVIIRV
                     "
BASE COUNT         2624 a         2913 c         2572 g         2790 t
ORIGIN      
        1 gacttacaaa ggtaaaaaca tgactgtccg tatcgaacac gatttattgg gcgaccgcga
       61 gattcccgcc gaagtgtatt ggggcatcca caccctgcgc gccattgaaa actttaaaat
      121 ctccacacaa aaaatttctg acgtgccgca gtttgtccgc agtatggtga tggtgaaaaa
      181 ggcgacggca caggcaaacg gtgagttggg cgcggtcaag cccgaaatcg ccgccgccat
      241 tgaaaaagcc tgcgacgaag ttctgctgaa caaccgctgc ctcgaccaat tcccgtccga
      301 cgtgtatcag ggcggtgcgg gtacttcggt caatatgaac accaacgaag tcatcgccaa
      361 cctcgcattg gaagtcttgg gatacgaaaa aggccgctac gacatcgtca atccgatgga
      421 tcacgtcaat gccagccaat cgaccaacga tgcctatccc acgggcttcc gccttgccgt
      481 gtattacagc atcggcgaat tgctcgacaa actgactgtc ctgaaaaacg cctttgccgc
      541 caaagccgaa gaatttaaag acgttttgaa aatgggccgc acccagcttc aagatgccgt
      601 gccgatgact gccggccaag aattccaatc tttccaagtg ttgttggaag aagaaatcct
      661 caacctcgac cgcacccgcc aactgctgtt ggaagtcaat ttgggcgcaa cggcaatcgg
      721 cacgggcgtg aacacgccca aaggctacgc cgaactggtg gtcaaaaaac tctccgaagt
      781 cagcggcttg ccttgcaaac tgaccgaaaa cctgattgag gcgacctccg actgcggcgc
      841 atatgtgatg gtacacggcg cattgaagcg cacggcggtc aaactctcca aaatctgcaa
      901 cgacttgcgc ctgctctctt ccggcccgcg tgccggcttg aaagaaatca acctgcccga
      961 attgcaggcc ggttcttcca taatgcccgc caaagtcaat cccgtgattc ccgaagtggt
     1021 caaccaagtc tgcttcaaag tcatcggcaa cgacacgacg attaccttcg ccgccgaagc
     1081 cgggcaactg caattaaacg tgatggagcc ggtcatcgcc caatgtatgt ttgaaaccat
     1141 ttccctcttg ggcaatgccg cagtcaacct gtccgacaaa tgcgtcaaag gcattacggt
     1201 caaccgcgaa atctgcgaac gttacgtttt caactccatc ggtttggtga cttatctgaa
     1261 tccgtatatc ggacaccaca acggcgattt ggtcggcaaa atctgcgccc aaaccggcaa
     1321 aggcgtgcgc gaggttgtct tggaacgcgg gctgttgagc gaagaagaac tcaaccgcat
     1381 cctctctccc gagaacctga tgaaccccca tctgtaacgt tgcagacaaa tgccgtctga
     1441 agcagggatg ctgcttcaga cggcattttg ttatatcaat cagccggatt atatgccgaa
     1501 cagtaccttg acttcccccc aataaaacag gcaggcgata gaacacagtg ccaacacgat
     1561 tcccgccgta ttgattgtgt tgattttttc cttaaagaac aatgcgcccg aaagcgtacc
     1621 caaaacaatc acgccgatat tcataccggc aaaaaccaag gtcggattat ccttcatcat
     1681 ttggtgcgcg gtgatgtagg ttacgatatt cataaaattc aaaccgccca agaatatgcc
     1741 gccgaccaca ctctcaacac gccatctgac cgatttggca aacaggcagg caaacatcag
     1801 cacacccgcc agcacaaatg caaccagcag gttgcccgca aatgccgttc cgcttttggc
     1861 aagctgtttg aacaggatat cgataatgcc gtaacctgcc cacacgccca gcagcaatgc
     1921 cgcctgccgc cacgcgcttc ctgatttttt gccaccgctg tgtttccaaa gcaggcagaa
     1981 cagtgcggca aatgcgaggc acagcccgat tagtttgcct tcgctgagtt tttcgccaaa
     2041 cagcgtcaag gcggcaacaa tcggcaaaaa cagcgacaaa cgctgcgccg cgtcggattt
     2101 gacgataccg gcggcttcca cagatttgcc cattatcacg aatacggacg gcagcagcac
     2161 gcccaaagcg gcaaacagcg gccacgtcgg caaaaatgcg ccgatattgc cgatatccgg
     2221 cttcaatacc agcagggtca gtatgaccgc gaccacataa ttgacggcga ccgcctgcgc
     2281 gatgtcgatt tttttcttcc ttgccatttt cagcaaaatg gaaaccgaca cgctgaacac
     2341 gatgctgatt aacaggtaag ccatactata tccatttctc gggtgcaacc gccctgccgc
     2401 cgttgaagcg gataaagccg gcgatgatgc ggtagaaata ccagacgttc gttgcaataa
     2461 taatcagcac gccgataccc aaaagggcag tcagcgcacc caaaatataa agccaaaatg
     2521 tgcgccaaaa ggttttaatc aggtattcgg tatgtgcggc atagacaatg ctgtccaaac
     2581 tgttccgttt catataggcg agaatcacgc cgactatggg catataggcg aaaatcacgc
     2641 cgactatggg catgaacagc atgattgcac ccaaaccgaa caggatgtag gcggcgagga
     2701 catagttgcg cccgcttccg ccgccggacg gttcgtaagt atggcacgaa cgtgatgcct
     2761 gccgttcaaa cgcctgtctg aacgcctgtt cgcggcgcat ctgttcgcgg taaaactgct
     2821 ccctgcgcgc ctgttcgcgg cggaatgcct cttcctgccg cccgcgttcc tcatgccgtc
     2881 tgaaggacgc gtcgtattgc atccgtttcg acaggtcgga aagcgtatcg taagcccgtt
     2941 ggatttcttt gaacttttct tccgccttcg gattgcccgg attgcggtcg ggatgatatt
     3001 tcatcgccag cttgcggtag gcgcgtttga tttcgtccgc tcccgcctgc ggcgacacgc
     3061 ccaatacggc atacaaatct ttgtccatat tgttccttta tactttcccg tcaaaccgcc
     3121 gcctgtattg ttttcgggtt caaaatattt aaatctccgg gacggatgcc gataatgaac
     3181 ccgcgttttc cgccgttgat atagatggtt tccaaatcca tcaccgactg ttcgacgtaa
     3241 atatccaact ttgtccggat gccgaacggc gttgtgccgc cgaccagata gcccgtccac
     3301 ttgtttgcct gtacgggcgt ggcgggttcg atgtgtttcg cacccaaatg ccgcgccaga
     3361 ttgcgggttg aaatctgctt gtcgccgtgc atcaagacaa tcagcccctt accgttttca
     3421 tcttgcaaaa caatggtttt aatgaccaag tgttcgtctt tgccgaatag tcgggcaaac
     3481 tgcgccgtgc cgccgtgttc ctcataggca taggtaaaag gttcaaattc gatgccgttt
     3541 tcacgcaaaa cgcgcacggc aggtgttatc ggataagtgt gtttactcat ttttcgtcat
     3601 gcaaaacatg gaaatcggtc aagcgcaatg ttaccatata tcccctttat cgaaggaaac
     3661 cgatatggat atccgatatt tcggcacaac gccccgctat tccgaagccg tcggcgcaaa
     3721 cggcttgatt ttcctctccg gcatggttcc cgaaaacggt gaaacggctg ccgaacagac
     3781 tgccgacgtg cttgcccaaa tcgaccgctg gctggcggaa tgcggctcgg acaaagcgca
     3841 cgttttggat gcggtcatct atctgcgcga tatgggcgac tatgcggaaa tgaacggcgt
     3901 gtgggacgct tgggttgccg ccggcagaac gcccgcccgc gcctgcgtgg aagcgcggct
     3961 cgcccgtccg gagtggcgcg tcgaaatcaa aataaccgcc gtgaagaaag atgcggcaac
     4021 cgcataaaca gatttccttt atatttcaga gtacgcaaat gatgaaaacc ttactgccct
     4081 ttttcggcgt ggtacgcgtc agcggcgaag accgccaaac cttcctgcac ggacagcttt
     4141 ccaacgacat caataatctt cagaccgggc aggcgtgtta tgcgacttac aacacgccca
     4201 aaggccgtgt catcgccaat atgattgtcg tcaaccgagg cggcgatttg ctgctgatta
     4261 tggcgcaaga cttgcttgaa gcaacggtca aacgtttgcg gatgtttgtg ttgcgtgcca
     4321 aagccgtttt tgaaatcctt gaagattacg ccgtcggcgc ggaattggaa gcatccgccg
     4381 aaccgcttgc cgcgcaagaa cccaaccttg cctttgccgc acaacaagat tcagacggca
     4441 tctgctctat cgctctgcct catggcggca tccttcgcat cgcccccaaa aacaccttgc
     4501 cgccttatga tgccgccgcc gaaaacgcgt ggcggctgca cgaaatccgt agcggttatc
     4561 cgtggatatg cgcggctacc aaagaaactg ccgttgccca aatgctcaac cagcacatca
     4621 tcggcggcgt acacttcaaa aaaggctgct atcccggtca ggaaatcatt gcccgtgccc
     4681 agtatcgggg gcaggtcaaa cgcggcttgg cggtattgtc gggaaattcg gccgtcgaag
     4741 caggaaccct gctgacggcg gacggcgaag aggccggcat cgtactcgac agcgttcaag
     4801 attcggaaaa ctttaccgcc cttgccgtga ttaaattctc cgccgcacaa aaagaactcg
     4861 ccgccccaaa cggcggtatc ttcaaagcgg ttcatctctt ctttaaaacc gaaaatgcag
     4921 aataatccct ctgatgccgt ctgaagccct tcagacggca ttgccgcccc gtcaatcggt
     4981 tacaatgccg cctttctaat tttcaaaccc aaaccgccat gtccaaaaaa accaaacaag
     5041 aactcgaaaa caacaaactc agcaaacgcc tgcgccacgc cgtcggcgac gcgattaacg
     5101 atttcaatat gatcgagccg gacgacaaaa tcatggtctg cctctccggc ggcaaagaca
     5161 gctatgccct gttagacatc ctgcgccagc tccaagccag cgcgccgatt gatttccaac
     5221 tggttgccgt caatctcgac caaaagcagc cgggcttccc cgaagaagta ttgccgacct
     5281 atctcgaaag cataggcgtg ccgtacaaaa tcgttgaaga agacacctac tccaccgtca
     5341 aacgcgtatt ggacgaaggc aaaacgactt gttcgctgtg cagccgcctg cgccgcggca
     5401 tcctctaccg cactgcaaaa gaattgggct gcaccaaaat cgccttggga caccaccgcg
     5461 acgacatcct cgccaccttg tttttaaata tgttttacgg cggcaaactc aaagccatgc
     5521 cgcccaagct ggtgagcgac aacggcgaac acatcgtcat ccgtccgctg gcgtatgtaa
     5581 aagaaaaaga cttaatcaaa tacgccgaat taaaacaatt ccccatcatc ccgtgcaacc
     5641 tctgcggctc gcaacccaac ctgcaacgcc aagtcatcgg cgatatgctg cgcgattggg
     5701 acaaacgctt ccccggccgc atcgaatcga tgttctccgc cctgcaaaac gtcgtccctt
     5761 cccaccttgc cgataccgaa ctcttcgact ttgtcggatt ggaacgcggt caaaccctga
     5821 aacacggcgg cgatttggcg tttgacagcg aaaaaatgcc cgaacgtttt tcagacggca
     5881 gcgaagaaga cgaaagcgaa atcaaaatcg agccgcaaaa agccgaacgc aaagtcatca
     5941 acattctggc gaacaagccg aaaacctgcg gcgcgtaaac ctccaccgtc aaaaatgccg
     6001 tctgaagccc gtttggcgtt tcagacggca ttttaaaatc ccgaagcaga cggcttccaa
     6061 acatttgttt ctcagtgtcc gttttcagaa tgcccgcctg cgggcatatt ttgcccgatc
     6121 agttcggcta tcctctcgcc gtcaaactgc gttttgaaca ccaccttgat ttctttggaa
     6181 atctcggcaa acagcttttc ggcatgtttg attttccgct cttcgctttt tcgcaaatct
     6241 tccgccccgt cagtcccttt ggcttcaatc acaaagttca gaatctcgcc gctttgggtt
     6301 ttcacgatat aggcaaaatc gggcgaatac gtgccgccgc cggcaacggg gattttgatg
     6361 gagtttctcg gtattttagt gaatacggtt acgccttcaa tttggttgtt ggcgacattt
     6421 tcatgttcta tatccgaatc gtagaaaatc tcgtcgaaga gatagccggc ggcaggccgg
     6481 tgctccgtat cttcaaatct tcccaaatct gcttttttca ccgcgcgcgg tttgccgtct
     6541 ttatcggtaa atttggtcgg atggattttg ctgccgacaa gctggtaatc cagttcgaat
     6601 ttatggaagg aatgatgaag caaaaaccgg ttgaagccgt ttttgatttg ggcgatggtc
     6661 tgcatattca aaaaatcgcc aatgttcagt tcgttgcgga cgcggtaaaa cgcctgatgc
     6721 aaagtctgca tgcggatttt tgccgtttgt gccagttttt ccagaagctc acggtaagtc
     6781 attgtgttga aacggataaa atcttcatct tcaaagctgt ctatgcggcg ggaaagcata
     6841 agcccgttgt tgatataagc ttcgtttacc gccgtgcgta tgcctgcctg cgggaatttg
     6901 gcggcgtttt cacgcaaata ggcagtaaat aaatcgacaa attcggcttc atctttgatt
     6961 ttgtactgca aaacggcttt atggtgaatc agctcccaca aggctttgag ttcttcatat
     7021 ttgccttcgc gcatgatgat ggtgtctttg ccttcgtctt tggcgttgct gactttgcct
     7081 ttgtccaaac ctttggggaa ggcttcggga taggcggctt ttaatttgtc atagccgtct
     7141 tcggtaaagt tttcattgtc gtcaatgatg ccgtctgaaa acagtttgtt taacaatccc
     7201 agaggtttga tatcggggta tttttgcaat attttttgtt tcagctcttc ggtaaacttt
     7261 tttgagattt cttcctgaaa agaattatcg ttgatttcgc cgacaagctg cttcacaaag
     7321 tctttttcgc tgctatcgac aaaataattc agtttgtacg gcacatcgcg cacccgcgcc
     7381 atcagctcgt ttaccggcag gcgcaggccg cgtccgactt cttgcagctt ggaagtcgtg
     7441 ctgccgctgg aacgcagttt gcaaatctgg aaaacgttgg gattgtccca gccttcgcgc
     7501 agcgtccatt tggaaaaaat aaagcggcgc gggttgtcca aagacaacag tttttcctta
     7561 tcgtgcagga tttcattgat ttcctgctcg attctatcgt cgctgtctgt attgtctttg
     7621 gaaaaataac cgccgtggca ggcggataca tcgtccaacg tcttttgcag gtaatcgcgg
     7681 taaaacgggt cgctttccgt tttcaggcgg cgtgccgctt ccgcgtgaat ccagctttca
     7741 aatttatctt tcaggctgcc tgaaagctcg ttgccgctgc ggtagcccgc aatatcatca
     7801 ataaaaaaca gcgtcagcgg cttgattttg ggctgtggcg cgcgttctgc caaaagtgcg
     7861 cgttccagct tgaaatgttc ggcaaccgcc ctctgcatca tcgcatcctg caccgtttgc
     7921 gaataggaat aagggttgat gacggcgccc gttttcaact ccaagccgtt gcttaacacc
     7981 accacggttt tattcatttt gtcgattttc aaatctgaaa cagcaggatg gattttcgcc
     8041 aaatcttcgc cttttgccag tttgaacgtc tgctttttgt ccttttcgtt taattcaaat
     8101 ttcgcttctt tgccgcccga cgacaccagt tttaccgccg catccatgcc gccctgcatt
     8161 tcttcctgaa acacgcgcac gcctttgacc agcccgtcgt taaacgcgtc tactgccgtc
     8221 aaacggtaaa gcaagttgta atattcatcg ttaaatgtcg caccgtagcg caaaatatat
     8281 tgcggtttta agcgtttgat attgccccat gttttcgcgc tctcccgggt cgggaattta
     8341 tgcggttcgt ccacaatcac aaacgggcgc acggcggcca atgcatcaac gggattgtca
     8401 aacaaatctt tcaatgcctt gtcgcccgta tcgttcatgg acgacgaatt aaccatgccc
     8461 gcgttaatca gcagcacatg gatttccttt ttgttttccg ctttggcaaa ttgctcaatc
     8521 gttatgggcg cattggactt tttgccctta ttctttttcg cgctttccac cacataggtt
     8581 ttcaggcgca cgccttcata atcgccgccg aaatcctgtt caaaatgctc tgccaaagcc
     8641 ttgctttgca aaaactgccg cgttcccgcc ttaatggaca aagtcggcac gaccacgata
     8701 aatttgaaca cgcccagcca acggtgcagc tcgaacatgg tttgtgtgta ggtataggtt
     8761 ttgcccgtgc ccgtttccat ggaaatatca aggatatttt ggtcgtccga acggtcgggg
     8821 aatcggccgt ctatgccgtt ttggctttgc actttcagga tattgtctgc gtattgtttt
     8881 gcagcaaaca aaagttcggg attttcgtct gccgcccgat atttgggcgt tgccccgtca
     8941 aacacgccca aaaccgccga aaccgcccgc atttggtgcg gctggttttt ctcgtaatta
     9001 aaaccactca taaactttct ccgtcaaacc ctgataatca cgtttaactc aatttctttt
     9061 ttattggcat aaccgcgaac cgcctggtca agttcgtgct gcatggcgct tgccatattg
     9121 ctgccgaata caatcacgcg gttgggattg aaatccgcat cgtcgtccag cttgcggata
     9181 aacgccaaca aatcggcgga agtaaaaccg gcattcatca gatacagccg tttttcgcac
     9241 agatacgccg tgtaagcccc taaccgcaca ggctcaaccg gcgtggtcag tgccgccccg
     9301 tcatacagcg tccaggtggt cagaagcgtt tgcagctgtt cttcgcttaa ttcatcgtta
     9361 agcggcaaat ccggttgttc gggcgaaaaa tccttgtccg gatgctgcct gaaattgtct
     9421 gccgtttgaa agattttgaa gcccgaatcg cccgtgtaat cgggatgttc gacgcggatt
     9481 ttggcggcgg ctttttctat gcgggctttg gtgatgtcga agatggtcgg gtagcctgct
     9541 ttacgggctt cggatttttc agcggttttt tcgggaagct gtacacagat atagcggcgg
     9601 ttaccgtttt gtccttcggc gttaagctgc atcacggcgt gggcggttgt gccgctgcct
     9661 gcgaagaagt ctaggattag gtcagtttga tttcccttga aagttgcaga aagaactaat
     9721 cttttcaata aatctaatgg ttttggtgtt tcaaaaggag aataaccttt tccagtttca
     9781 aacaactctt ctaattcacg aataccatct ttagtaagat ttttacttat atttccaata
     9841 tttaagatgc tatgaaattt ggaaaaatca tcggatactt ttctaagttt tccaataatt
     9901 gttttcccat aagacttcgg aattaagata tattcattat tttcaatatc tttatcaatt
     9961 ttgtttttaa actcaattcc ttttatttca ataatatctt cgtaatgcaa gttcccatat
    10021 ttgccaaact gttcgcgaac ggcatcttcc tgtatccaat ataattcatc attgattaca
    10081 atttttttgc cgcgtatatc ttttggtctt tttagattgt caaaatgagt aatatctttc
    10141 gcataaacta aaacagtttc atgcccattt acaacatatt ttgcattacc accaccttct
    10201 gatgtattaa caattaaatc tttaataaaa ttcccttccc caaacacttc atcacacaac
    10261 aacttcaact gcgccgcttc gttatcgtca atcgagataa aaatcacgcc gtcgtccttt
    10321 aacagttcgc gggcgatata caggcgcgga tacataaagg tcaaccatgc actgtgcgag
    10381 tttgagcctt tgtcggtgaa atctaaaatc cgcgcggctt cgtcttcgtc aatattggct
    10441 aagcaggcaa gttcggctgg tgtgaatttg cggtcgtcct gatagacaaa gccgtctgat
    10501 ccggtgttgt agggcgggtc gatgtaaatc atcttcacgc tgtttgtgta ggcgtttttt
    10561 aagtgtttca acacttctag attgtcgcca cgaatcagta ggttttggct gcctgcattt
    10621 tcgggtttgg cgttgtgcgt cttgtcttca cttatcaggg tttcgggcgg caggttgcga
    10681 agcaggcgag catatgattt gcccagccag ttcatttcgt aaaattcgcg tccgatgtcg
    10741 gtctgtggcg caatttcggc ttgtaatctg tcgataagga aatttccgtc tgcgtcaaaa
    10801 caggcgggaa acagtttttt gagctgttcg agttgggtag agttggcggt aatgccgtct
    10861 gaagtgtaga ttgcctcggt gttcaccccg gctgtgtcg
//
LOCUS       DBBZXU010000062        10522 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.062, whole genome shotgun sequence.
ACCESSION   DBBZXU010000062 DBBZXU010000000
VERSION     DBBZXU010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10522)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10522)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10522
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.062"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(191..2599)
                     /locus_tag="ACJJDE_001381"
     CDS             complement(191..2599)
                     /locus_tag="ACJJDE_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS-assembly protein LptD"
                     /protein_id="HGG7541299.1"
                     /translation="MARLFSLKPLVLALGLCFGTHCAAADAVAAEETDNPTAGGSVRS
                     VSEPIQPTSLSLGSTCLFCSNESGSPERTEAAVRGSGEASIPEDYTRIVADKVEGQSQ
                     VQVRAEGNVVVERNRTTLNTDWADYDQSGDTVTAGDRFALQQDGTLIRGETLTYNLEQ
                     QTGEAHNVRMEIEQGGRRLQSVSRTAEMLGEGHYKLTETQFNTCSAGDAGWYVKAASV
                     EADREKGIGVAKHAAFVFGGVPLFYTPWADFPLDGNRKSGLLVPSLSAGSDGVSLSVP
                     YYFNLAPNLDATFAPGVIGERGAVFDGQVRYLRPDYAGQSDLTWLPHDKKSGRNNRYQ
                     AKWQHRHDISDTLQAGVDFNQVSDSGYYRDFYGNKEIAGNVNLNRRVWLDYGGRAAGG
                     SLNAGLSVLKYQTLANQSGYKDKPYALMPRLSADWRKNTGRAQIGVSAQFTRFSHDSR
                     QDGSRLVVYPDIKWDFSNSWGYVRPKLGLHATYYSLNRFGSQEARRVSRTLPIVNIDS
                     GATFERNTRMFGGGVLQTLEPRLFYNYIPAKSQNDLPNFDSSESSFGYGQLFRENLYY
                     GNDRINTANSLSAAVQSRILDGATGEERFRAGIGQKFYFKDDAVMLDGSVGKKPRNRS
                     DWVAFASGSIGSRFILDSSIHYNQNDKRAENYAVGASYRPAQGKVLNARYKYGRNEKI
                     YLKSDGSYFYDKLSQLDLSAQWPLTRNLSAVVRYNYGFEAKKPIEVLAGAEYKSSCGC
                     WGAGVYAQRYVTGENTYKNAVFFSLQLKDLSSVGRNPADRMDVAVPGYIPAHSLSAGR
                     NKRP"
     gene            2669..3673
                     /gene="amgK"
                     /locus_tag="ACJJDE_001382"
     CDS             2669..3673
                     /gene="amgK"
                     /locus_tag="ACJJDE_001382"
                     /EC_number="2.7.1.221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009312645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramate/N-acetylglucosamine kinase
                     AmgK"
                     /protein_id="HGG7541300.1"
                     /translation="MQRQTELKNWLQTVYPERDFDLTFAAADADFRRYFRATFSDGSS
                     VVCMDAPPDKMSVAPYLKVQKLFDMVNVPQVLHADTDLGFVVLNDFGNTTFLTAMLQE
                     QGETAHKALLLEAIGELVELQKASREGVLPEYDRETMLREINLFPEWFVAKELGRELT
                     FKQRQLWQQTVDTLLPPLLAQPKVYVHRDFIVRNLMLTRGRPGVLDFQDALYGPISYD
                     LVSLLRDAFIEWEEEFVLDLVIRYWEKARAAGLPVPEAFDEFYRWFEWMGVQRHLKVA
                     GIFARLYYRDGKDKYRPEIPRFLNYLRRVSRRYAELAPLYALLVELVGDEELETGFTF
                     "
     gene            complement(3730..4428)
                     /locus_tag="ACJJDE_001383"
     CDS             complement(3730..4428)
                     /locus_tag="ACJJDE_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA/DsbL"
                     /protein_id="HGG7541301.1"
                     /translation="MKSRQLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGL
                     VEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEH
                     VVWQKEMLPLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
                     FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTID
                     LLADKVREEQKAAQ"
     gene            4455..4646
                     /locus_tag="ACJJDE_001384"
     CDS             4455..4646
                     /locus_tag="ACJJDE_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541302.1"
                     /translation="MLEINRNPAILLHFRVLIQFAAGKGRFRFGKPLQTASNPMPSEA
                     VSVVQYAPLPQTGTTVEEQ"
     gene            4646..6184
                     /gene="murJ"
                     /locus_tag="ACJJDE_001385"
     CDS             4646..6184
                     /gene="murJ"
                     /locus_tag="ACJJDE_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HGG7541303.1"
                     /translation="MNMLGALAKVGSLTMVSRVLGFVRDTVIARAFGAGMATDAFFVA
                     FKLPNLLRRVFAEGAFAQAFVPILAEYKETRSKEAAEAFIRHVAGMLSFVLVIVTALG
                     ILAAPWVIYVSAPGFAQDADKFQLSIDLLRITFPYILLISLSSFVGSVLNSYHKFGIP
                     AFTPTFLNVSFIVFALFFVPYFDPPVTALAWAVFVGGILQLGFQLPWLAKLGFLKLPK
                     LNFKDAAVNRVMKQMAPAILGVSVAQVSLVINTIFASYLQSGSVSWMYYADRMMELPG
                     GVLGAALGTILLPTLSKHSANQDTEQFSALLDWGLRLCMLLTLPAAVGLAVLSFPLVA
                     TLFMYREFTLFDAQMTQHALIAYSFGLIGLIMIKVLAPGFYARQNIKTPVKIAIFTLI
                     CTQLMNLAFIGPLKHVGLSLAIGLGACINAGLLFYLLRKHGIYRPGKGWAAFLAKMLL
                     ALAVMGGGLYAAQIWLPFDWTHTGGMQKAARLFILIVIGGCLYFASLAALGFRPRHFK
                     RVES"
     gene            6317..7273
                     /locus_tag="ACJJDE_001386"
     CDS             6317..7273
                     /locus_tag="ACJJDE_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheT family hydrolase"
                     /protein_id="HGG7541304.1"
                     /translation="MILTPPDTPLFLRNGNADTIAAKFLQRPAPAYRRELLPDSTGKT
                     KVAYDFSDGISPDAPLVVLFHGLEGSSRSHYAVELMLAVRDRGWHGVVVHFRSCGGIA
                     NTAPVFYHLGDTAEIAFTLDTFAARYREIYAVGVSLGGNALAKYLGEQGKKALPQAAA
                     VISAPVDAEAAGRRFDSGITRLLYTRYFLRTLIPKAKSLQGFQTAFAAGCKTLGEFDD
                     RFTAPLHGFADRHDYYRQTSCKPLLKHVAKPLLLLNAVNDPFLPPEALPIPDEVSEAV
                     TLFQPAHGGHVGFVGSTGGRLHLQWLPQTVLSYFDSFRTNSR"
     gene            7323..8105
                     /gene="trpC"
                     /locus_tag="ACJJDE_001387"
     CDS             7323..8105
                     /gene="trpC"
                     /locus_tag="ACJJDE_001387"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HGG7541305.1"
                     /translation="MTDILNKILATKAQEVAAQKAAVNAEHIRALAAEAAPVRSFIDS
                     IRGKHRLNLPAVIAEIKKASPSKGLIRPDFRPAEIARAYENAGAACLSVLTDEPYFQG
                     SPEYLKQAREAVSLPVLRKDFIIDEYQVYQARAWGADAVLLIAAALEQEQLERFEAVA
                     HELGMTVLLELHDETELEKCRNLTTPLWGVNNRNLRTFEVSLDQTLSLLPALEGKTVV
                     TESGITGKADVEFMQSRGVHTFLIGETFMRAGDIEAEVGKLF"
     gene            8170..10470
                     /gene="recQ"
                     /locus_tag="ACJJDE_001388"
     CDS             8170..10470
                     /gene="recQ"
                     /locus_tag="ACJJDE_001388"
                     /EC_number="5.6.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HGG7541306.1"
                     /translation="MHRPTAKQILHEVFGYPEFRGRQEAVINTLAGGGSLTVLMPTGG
                     GKSLCYQIPALMREGVAVVVSPLIALMNDQVANLHAAGIEAAAVNSSTSADGAREIAD
                     KLAQGRLKLLYVAPERLVTDRFLRFLDQQTVSLFAIDEAHCVSQWGHDFRPEYQQLGM
                     LAERYPNVPRIALTATADAATRADIKHYLHLDDAPEFISSFDRPNIYYQVIEKNNGKK
                     QLLEFIRKEMTGQSGIVYCLSRKKVEDVAQFLRENGLNAIPYHAGLSMDVREENQRRF
                     TREDNIIVVATVAFGMGIDKPDVRFVAHLDMPQSVEHFYQESGRAGRDGLPAVSWLCY
                     GLNDWVLLHERIAEGNSDEVQKQIEMQKLDAMLAVCETAACRRVLLLKHFGEASEPCG
                     HCDNCLHPPVRFDGTVLVQKLLSCVYRAGQRFAAGYITNLLRGKSDDWIRGNRHEQLS
                     TFGIGTELSNKEWRSVIRQCISLGYLTVNITRYQALQLTEAAKKVLKGETEVMLRPLK
                     RDKPAARTLKDNWLRTEREERLWQALRVWRMKQAEAEGIPAYMIFGDKTLRDLVEKMP
                     QDLNGLHDIYGLGEAKIDRFGHGILEVCRNAADFSHDAVIRPQTEREQQLRQKLEAWR
                     YEQARAENCALHAVLSDESLADMLAATPETETDLEGVHGLGSVRAAKYGRDILAVCRP
                     FSDGIDEAAKHKRRLMRALIQWCGETAKHEQSEPYRILSKAALRAIAAKQPEGLAELA
                     AVYGVGEEKAARYGAAVLAVLERNAV"
BASE COUNT         2157 a         2984 c         3014 g         2367 t
ORIGIN      
        1 gatgcggttt ttgccttttg cggtgcggcg tggacatcgg ctgctgccag caatgcggcg
       61 gcaatcatca gggctttgat tttcatcatt ctttccttat cgtttgaatc ctacctttga
      121 tggcgggttt ggggttgtcg gtggaatgcc gtcttgtgcg ggaacggtgc tcctgccggg
      181 tttccgacgg tcagggtcgt ttgttgcgtc cggcggaaag agagtgggcg gggatgtagc
      241 cgggaacggc gacatccatc ctgtctgcgg ggtttctgcc gacactgctg aggtctttca
      301 actgaagtga gaaaaagaca gcgtttttgt aggtgttttc gccggtaacg tagcgttggg
      361 cgtacacgcc cgcgccccag cagccgcaac tgcttttgta ttccgcaccc gccagcacct
      421 ctatcggttt tttggcttca aaaccgtagt tgtaacggac gacggccgac aggttgcgcg
      481 tcagcggcca ttgtgcggac aggtcgagct ggctgagttt gtcgtaaaaa taggaaccgt
      541 cggacttcag gtagattttt tcgttgcgcc cgtatttgta gcgggcgttc agcactttgc
      601 cctgtgcggg acggtagctt gcaccgacgg cgtagttctc ggcgcgtttg tcgttttggt
      661 tgtagtggat gctgctgtcg aggatgaagc ggctgccgat gctgccggag gcaaatgcca
      721 cccagtcgga acggttgcgc ggttttttgc cgacgctgcc gtcaagcatc accgcatcat
      781 ccttgaaata gaatttctga ccgatgccgg cgcggaaacg ctcttccccc gtcgcgccgt
      841 ccaaaatacg gctttgcacg gcggcggaaa ggctgtttgc ggtgttaatc ctgtcgttgc
      901 cgtaatagag gttttcgcga aagagctgcc cgtagccgaa gctgctttcc gacgaatcga
      961 aattgggcag gtcgttttgg gatttggcag gaatatagtt gtagaacagg cgcggctcga
     1021 gggtttgcag gactccgccg ccgaacatcc gcgtattccg ctcaaaagtt gcgccgctgt
     1081 cgatgttgac aatgggcaga gtgcggctga cgcgtcgggc ttcttggctg ccgaagcggt
     1141 tgaggctgta ataggtggcg tgcagtccga gtttgggacg gacgtaaccc cagctgttgc
     1201 tgaaatccca tttgatgtcg ggatagacga cgaggcggct gccgtcttgg cggctgtcgt
     1261 ggctgaagcg ggtaaattgt gcggacacgc cgatttgcgc cctgccggtg tttttgcgcc
     1321 aatcggcgga aaggcgcggc atcagggcat acggtttgtc tttgtagccg ctttggtttg
     1381 ccagcgtctg gtatttcaga accgaaaggc cggcattcag gctgccgccc gccgccctgc
     1441 cgccataatc cagccataca cggcggttga ggttgacgtt gccggcgatt tctttgttgc
     1501 cgtaaaagtc gcggtagtag ccgctgtcgg agacttggtt gaaatcgaca cccgcctgaa
     1561 gcgtgtcgga aatgtcgtgc cgatgctgcc atttcgcctg atagcggtta ttcctgccgc
     1621 tttttttgtc gtgcggcagc caggtcaggt cggactggcc ggcataatcc ggccgcaggt
     1681 agcgtacctg cccgtcaaag accgcgccgc gttcgccgat cacgccgggc gcgaacgtgg
     1741 catcgagatt gggggcaagg ttgaaataat agggaacgga aagggaaacg ccgtccgaac
     1801 cggcggacag tgagggaaca agcaggccgc ttttgcggtt gccgtcaagc gggaagtccg
     1861 cccaaggcgt atagaaaagg ggaacgccgc cgaacacgaa ggcggcgtgt ttggcaacgc
     1921 ctatgccttt ttcccgatcg gcttcgacag aggctgcctt gacataccag ccggcatcgc
     1981 cggcggaaca ggtgttgaat tgggtttccg tcagtttgta atgcccttcg cccaacattt
     2041 cggcggtgcg gctgacgctt tgcagccgcc gtccgccttg ttcgatttcc atgcggacgt
     2101 tgtgcgcttc gccggtctgc tgctcgagat tgtaggtcag ggtttcgccc cgaatcagcg
     2161 taccgtcctg ttggagggcg aaccggtcgc ctgcggtaac ggtgtcgccc gactggtcgt
     2221 aatccgccca atcggtattg agggtcgtcc ggttgcgttc gacgacgacg ttgccttcgg
     2281 cacgcacctg cacctgcgac tgtccttcca ccttgtcggc aacaatgcgc gtatagtctt
     2341 cggggatgga tgcttcgccg ctgcctcgga cggcggcttc ggttctctcg gggctgccgc
     2401 tttcgttact gcaaaacagg caggtcgaac cgaggctcag gctggtaggc tgtatgggtt
     2461 cggacacgct ccgaacgctt cctccggcgg tcggattgtc cgtttcctcc gccgcaacgg
     2521 catcggcggc ggcgcaatgc gtgccgaagc agaggcccaa tgccagcacc agtggtttga
     2581 gtgaaaataa acgagccaaa atcgcccctc aagtcggttt gccagttaga atagcgttta
     2641 ttgtaacctg aaatgcttta gtactgttat gcaacggcaa accgaactga aaaattggct
     2701 tcagaccgtt tatcccgaac gggacttcga tctgactttt gcggcggcgg atgctgattt
     2761 ccgccgctat ttccgtgcaa cgttttcaga cggcagcagt gtcgtctgca tggatgcacc
     2821 gcccgacaag atgagtgtcg caccttattt gaaagtgcag aaactgtttg acatggtcaa
     2881 tgtgccgcag gtattgcacg cggacacgga tctggggttt gtggtattga acgactttgg
     2941 caatacgacg tttttgaccg caatgcttca ggaacagggc gaaacggcgc acaaagccct
     3001 gcttttggag gcaatcggcg agttggtcga attgcagaag gcgagccgtg aaggggtttt
     3061 gcccgaatat gaccgtgaaa cgatgttgcg cgaaatcaac ctgttcccgg aatggtttgt
     3121 cgcaaaagaa ttggggcgcg aattaacatt caaacaacgc caactttggc agcaaaccgt
     3181 cgatacgctg ctgccgcccc tgttggcgca gcccaaagtc tatgtgcacc gcgactttat
     3241 cgtccgcaac ctgatgctga cgcgcggcag gccgggcgtt ttagacttcc aagacgcgct
     3301 ttacggcccg atttcctacg atttggtgtc gctgttgcgc gatgccttta tcgaatggga
     3361 agaagaattt gtcttggact tggttatccg ctactgggaa aaggcgcggg ctgccggcct
     3421 gcccgtcccc gaagcgtttg acgagtttta ccgctggttc gaatggatgg gcgtgcagcg
     3481 gcacttgaag gttgcaggca tcttcgcacg cctgtactac cgcgacggca aagacaaata
     3541 ccgtcccgaa atcccgcgtt tcctcaatta cctgcgccgc gtatcgcgcc gttatgccga
     3601 actcgccccg ctctacgcgc tcttggtcga actggtcggc gatgaagaac tggaaacggg
     3661 ctttacgttt taaacccaat caaaatgccg tctgaaaacc aagtttcaga cggcattttt
     3721 caaacgggct tactgcgcgg ctttttgttc ttcgcgtact ttgtccgcca aaaggtcgat
     3781 ggtgttcata ccggactccc agtcggcaaa ttcaacttta tatttaccgc cgacgataac
     3841 cgtgggcgta ccgtcgattt ggaaggtttc ggtcagctcc tgcattttgt cggcgcgcgc
     3901 ctggctttcg ggggactcgt aggcggcaag gacttttttg ccgtcaaagg cggtttgttc
     3961 gcccagccat tttttgagga cttccggctc ttgcagcttg attttttggt tgaccatcgc
     4021 atcgaaaata tggctgttcg ccacatcttt gctgtcggcg gcagccatat cgacggcggc
     4081 ggcgaggcgt gccagcggca gcatttcttt ttgccaaacg acatgctcgg tacgcaggta
     4141 catatcgtct ttaaaagact tggcgtgttt gctcaaaaca ggttcgaggt gggcgcagtg
     4201 cggacagaaa tagccgaaaa actcaaggac ttcgactttg cctgcctgct gttggggaat
     4261 cgggttggca aggacggtat agttttgccc ttcgaccagc cctgccgggg cggcggctgc
     4321 cgaagcggca ggcgcgctgt cggcggggac gctggtttgg actttgctgt cgcacgcggc
     4381 aagggcgaac agggcggcaa cgccgagggc gagttgtctg gatttcatac ggctctccgt
     4441 gatgttggaa acagatgttg gaaatcaatc ggaatccggc tattttattg catttccgcg
     4501 tgttgataca gtttgccgcc ggaaaaggac gttttcgttt cgggaaaccg cttcagacgg
     4561 catcaaaccc gatgccgtct gaagcggttt ctgtcgtaca atacgcgccg ttgccccaaa
     4621 cgggtacgac tgttgaggaa caatgatgaa tatgctggga gctttggcaa aagtcggcag
     4681 cctgacgatg gtgtcgcgcg ttttgggatt tgtgcgcgat acggtcattg cgcgggcatt
     4741 cggcgcgggt atggcgacgg atgcgttttt tgtcgcgttc aaactgccca acctgctgcg
     4801 ccgcgtgttt gcggaggggg cgtttgccca agcgtttgtg ccgattttgg cggaatataa
     4861 ggaaacgcgt tctaaagagg cggcggaggc ttttatccgc catgtggcgg ggatgctgtc
     4921 gtttgtgctg gtcatcgtta ccgcgctggg catactcgcc gcgccttggg tgatttatgt
     4981 ttccgcaccc ggctttgccc aagacgcgga caagttccaa ctttccatcg atttgctgcg
     5041 gattacgttt ccttatatcc tattgatttc actttcctct tttgtcggct cggtactcaa
     5101 ttcctatcat aagttcggca ttcccgcgtt tacgcccaca ttcctgaacg tgtcgtttat
     5161 cgtattcgcg ctgtttttcg tgccgtattt cgatccgccc gttaccgctc tggcatgggc
     5221 ggtttttgtc ggcggtattt tgcaactcgg cttccaactg ccctggctgg cgaaactggg
     5281 ctttttgaaa ctgcccaaac tgaatttcaa agatgcggcg gtcaaccgcg tgatgaaaca
     5341 gatggcgccg gcgattttgg gcgtgagcgt ggcgcaggtt tctttggtga tcaacacgat
     5401 tttcgcgtct tatctgcaat cgggcagcgt ttcatggatg tattacgccg accgcatgat
     5461 ggaactgccc ggcggcgtgc tgggggcggc actcggtacg attttgctgc cgactttgtc
     5521 caaacactcg gcaaaccaag atacggaaca gttttccgcc ctgctcgact ggggtttgcg
     5581 cctgtgtatg ctgctgacgc tgccggcggc ggtcggactg gcggtgttgt cgttcccgct
     5641 ggtggcgacg ctgtttatgt accgcgaatt cacgctgttt gacgcgcaaa tgacgcaaca
     5701 cgcgctgatt gcctattctt tcggtttaat cggtttaatc atgattaaag tgttggcgcc
     5761 cggcttttat gcgcggcaaa acatcaaaac gcccgtcaaa atcgccatct tcacgctcat
     5821 ttgcacgcag ttgatgaacc ttgcctttat cggcccactg aaacacgtcg gactttcgct
     5881 tgccatcggt ctgggcgcgt gtatcaatgc cggattgttg ttttacctgt tgcgcaaaca
     5941 tggtatttac cggcccggca agggttgggc ggcgttcttg gcaaaaatgc tgctcgcgct
     6001 cgccgtgatg ggaggcggcc tgtatgccgc ccaaatctgg ctgccgttcg actggacaca
     6061 caccggcgga atgcaaaagg ccgcccggct cttcatcctg attgtcatcg gaggctgcct
     6121 gtatttcgca tcactggctg cactgggctt ccgtccgcgc catttcaaac gggtggaaag
     6181 ctgaccgatg ccgatatcct ttttcggcaa acgctttttc cacgcctata ttcgggcgcg
     6241 catcccccgc gtccgcaccg gccggacggg ctgccgcatc atcaatgccg tctgaaaaca
     6301 agaaaaccga taccttatga ttttgacacc gccggacacg ccccttttcc tccgcaacgg
     6361 caatgccgac acgattgccg ccaaattcct gcaacgcccc gcacctgcat accgccgcga
     6421 gctgcttccc gacagcacgg gtaaaaccaa agtcgcctac gacttttcag acggcatttc
     6481 gcccgatgcg ccgctggtcg tgctgtttca cggtttggaa ggaagcagcc gcagccatta
     6541 cgcggtcgaa ctgatgcttg cggtacgcga tcggggttgg cacggcgtag tcgtccattt
     6601 ccgcagctgc ggcggcattg ccaacaccgc tccggtgttc taccacttgg gcgataccgc
     6661 cgaaatcgcc tttactttgg acacgttcgc cgcgcgttac cgtgaaatat acgccgtcgg
     6721 cgtatcgctg ggcggcaacg cgctggcaaa atatttgggc gaacagggca aaaaggcatt
     6781 gccgcaagcc gctgccgtca tctccgcccc cgtcgatgca gaggcggcag gcagacgctt
     6841 cgacagcggc atcacgcggc tgctctacac gcgctacttc ctccgcaccc tgatacccaa
     6901 agcaaaatcg ctccaaggtt ttcagacggc atttgccgca gggtgcaaaa cactgggcga
     6961 gtttgacgac cgcttcaccg caccgctgca cggctttgcc gaccggcacg actactaccg
     7021 ccaaacttcc tgcaaaccgc tgctcaaaca cgttgccaaa ccgctgctcc tgctcaatgc
     7081 cgtcaacgac cccttcctgc cgcccgaagc cctgccgata ccggacgaag tgtccgaagc
     7141 cgttaccctg ttccaacctg cacacggtgg tcatgtcggc tttgtcggca gcaccggcgg
     7201 caggctgcac ctgcaatggt tgccgcagac cgtcctgtcc tatttcgaca gcttccgcac
     7261 aaacagtcgt taacggtttg atgctaatat tccccctttc ccagacgaat acggaacccg
     7321 acatgaccga catcctcaat aaaatccttg ccaccaaagc acaggaagtt gccgctcaaa
     7381 aagccgccgt caacgccgaa cacatccgcg cacttgccgc agaagccgcg cccgtccgca
     7441 gcttcatcga ttcgatacgc ggcaaacacc gcctaaacct gcccgccgtc atagccgaaa
     7501 tcaaaaaggc aagcccgagc aaagggttaa tccgtccgga cttccgccct gccgagattg
     7561 cacgcgccta tgaaaacgcc ggagcggcgt gtttgtccgt actgaccgac gaaccctatt
     7621 tccaaggttc gcccgaatac ctcaaacagg cgcgcgaagc cgtatcgctg cccgtgctgc
     7681 gcaaagactt catcatcgac gaataccagg tttatcaggc gcgcgcatgg ggggcggatg
     7741 ccgtcctgct gattgccgca gcactggaac aggaacaatt ggaacgcttt gaagcggtgg
     7801 cgcacgaatt gggcatgacc gtcctgctcg agctgcacga tgaaaccgaa ttggaaaaat
     7861 gccgcaacct gaccacgccg ttgtggggcg taaacaaccg caacctgagg acttttgaag
     7921 tctccctcga ccaaaccctg tcgctgctgc ccgcgctgga aggcaaaacc gtcgtaaccg
     7981 aaagcggcat tacaggcaag gcggatgtgg aatttatgca atcgcgcggt gtgcacacct
     8041 tcctgatcgg cgaaacgttc atgcgtgccg gcgatattga ggcggaagtg ggcaaactct
     8101 tctaaatccc gatttcagac ggcatattgc cgccaaccga ccaacaccct taccgagcac
     8161 ggaaccatca tgcaccgacc gaccgccaaa cagattctgc acgaagtatt tggttatccc
     8221 gaatttcgcg gcaggcagga ggctgtcatc aatactttgg caggcggcgg gagtttgacg
     8281 gtgctgatgc cgacgggcgg cggcaagtct ttgtgttacc agattcccgc gctgatgcgc
     8341 gaaggcgtgg cggttgtcgt atcgccgctg attgcgttga tgaacgacca agtggcaaac
     8401 ctgcacgccg ccggcatcga agcggcggca gtcaacagca gcacatcggc agatggggcg
     8461 cgcgagattg ccgacaagct tgcccaaggc cgtctgaaac tgctttatgt cgcgccggaa
     8521 cgcttggtta ccgaccgctt tttgcgtttt ctcgaccaac aaaccgtcag cctgttcgcc
     8581 attgatgagg cgcattgcgt cagccaatgg ggacacgatt tccgccccga gtaccaacag
     8641 ctcggcatgc ttgccgaacg ctatccgaac gtcccgcgca tcgccctgac cgccaccgcc
     8701 gatgccgcca cgcgcgccga catcaagcat tatctgcact tggacgatgc gcccgaattt
     8761 atctccagct ttgaccgccc gaatatttat tatcaggtta tcgaaaaaaa taatggcaaa
     8821 aaacaactgc ttgaattcat ccgcaaagaa atgacggggc aaagcggcat tgtgtattgc
     8881 ctaagccgca aaaaagtcga agatgtggcg cagtttttgc gtgaaaacgg attaaacgcg
     8941 attccgtatc atgccggttt gagcatggac gtgcgcgagg aaaaccaacg ccgctttacg
     9001 cgtgaagaca atattatcgt ggtggcgacc gtggcgttcg gtatgggcat agacaaaccc
     9061 gacgtgcgct ttgtcgccca tctcgatatg ccccagagtg tcgaacattt ctatcaggaa
     9121 tcggggcgcg ccggacggga cgggctgcct gccgtgagtt ggctgtgtta cggtttgaac
     9181 gattgggtgt tgctgcacga acggattgcc gaaggcaaca gcgacgaggt gcaaaagcaa
     9241 atcgaaatgc aaaaactcga tgccatgctt gccgtctgcg aaaccgccgc ctgccgccgc
     9301 gtactgctgc tcaaacattt cggcgaagca tccgaaccct gcggccattg cgacaactgc
     9361 ctgcatccgc ccgtacggtt tgacggcacg gtgttggtgc aaaaattact cagctgcgtg
     9421 taccgcgccg gacaacgttt tgccgccggt tacatcacca accttttgcg aggtaaaagc
     9481 gacgattgga tacgcggcaa ccggcacgaa caactgtcca cattcggcat cggtacggag
     9541 ttgtccaaca aagaatggcg cagcgtcatc cgccagtgta tcagcctcgg ctacctcacc
     9601 gtcaacatta cccgatatca ggcattgcaa ctgaccgaag ccgccaaaaa agtcctcaaa
     9661 ggcgaaaccg aagtgatgct gcgtccgctc aagcgcgaca agcccgccgc ccgcaccctc
     9721 aaagacaact ggctgcgtac cgaacgcgaa gaacgcctgt ggcaggcatt gcgcgtttgg
     9781 cgtatgaaac aggcagaagc cgaaggcatc cccgcctata tgattttcgg cgacaaaacc
     9841 ctgcgcgacc ttgtcgaaaa aatgccgcaa gacctcaacg gtctgcacga catctacggc
     9901 ttgggcgaag ccaaaatcga ccgtttcgga cacggtatcc tcgaagtctg ccgcaacgcc
     9961 gccgacttta gccacgatgc cgtcatccgt ccgcaaaccg aacgcgaaca acaactgcgt
    10021 caaaaactcg aagcctggcg gtatgaacag gcaagggcgg aaaactgcgc cctgcatgcc
    10081 gtcctctccg acgaaagcct tgccgatatg cttgccgcca cgcccgaaac cgaaaccgac
    10141 ctcgaaggcg tgcacggctt gggcagcgta cgcgccgcca aatacggacg ggacatcctc
    10201 gccgtctgcc gtccgttttc agacggcatc gatgaagccg ccaaacacaa acgccgcctg
    10261 atgcgcgccc tgattcaatg gtgcggcgaa acggcaaaac acgaacagtc cgaaccctac
    10321 cgcattctca gcaaagccgc cctgcgcgcc attgccgcca aacagccgga aggtttggcg
    10381 gagcttgccg ccgtatatgg cgtaggcgaa gaaaaagccg cacgttacgg tgcggcggtg
    10441 ttggcggtat tggaacgaaa tgccgtctga agcccgttac caagtttcag acggcattgc
    10501 ctctatttaa aaattcctgt tt
//
LOCUS       DBBZXU010000063        10485 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.063, whole genome shotgun sequence.
ACCESSION   DBBZXU010000063 DBBZXU010000000
VERSION     DBBZXU010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.063"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..141
                     /locus_tag="ACJJDE_001389"
     CDS             <1..141
                     /locus_tag="ACJJDE_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HGG7541307.1"
                     /translation="VGIGSGALLGHWVTQYVGISRIGIAGMLAAAAGLWLCLNLNRHI
                     RT"
     gene            270..1706
                     /locus_tag="ACJJDE_001390"
     CDS             270..1706
                     /locus_tag="ACJJDE_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBOAT family protein"
                     /protein_id="HGG7541308.1"
                     /translation="MPLLSVEFALFFLAFLPIYWGLAKYPSVQNLLLLAAGMGWLYHI
                     GPVFAAIVVLYSSCVYLLGELLRSDRENTRRFWLGCGIAVSLTVLGFFKYFDFFRPLI
                     AQYAGQGGAIDILMPLGLSYYTFQSLAYLVYCFRAPHAARFEWHELLLHLSFFPTVTS
                     GPIIRAAAFKSADGEQAGALAQIRTRQPRSPVRPALAVSLILLGIAKKWWLAGMLAEN
                     WVSPVFENPAQFDGWGVLGGVYGYTFQLFLDFSGYSDLVIGMAMLLGFRLPKNFSAPL
                     RALNIRAFWDKWHISLSTWIRDYIYIPLGGSKKGFLRTQLNLMAAMVLSGIWHGYGWN
                     FLIWGALHGTALVLLNTGDRYFGRNALCRLKYLAPLSWFVTFHFVCLSFVVFNTASPD
                     DAGAVFNALFANANGWNAPQQANMLLLASFASVMLLYPYLQRAFDGAVKGLEKIPMWL
                     WFIPVSAVLLLIIVLAPSGIPGFIYANF"
     gene            1717..2700
                     /gene="patB"
                     /locus_tag="ACJJDE_001391"
     CDS             1717..2700
                     /gene="patB"
                     /locus_tag="ACJJDE_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase PatB"
                     /protein_id="HGG7541309.1"
                     /translation="MKNFLSLFASILMSALIAVWFSQNPINAYWQQTYHRNSPLEPLA
                     AYGWWRSGAALQENAYTFSDGIKAFLSGETPSTAQGGGSADMPSEAAASEAVPQTGKT
                     EWKQDTEAAAVRSGDKVFFAGDSLMQGVAPFVQKSLKQQYGIESVNLSKQSTGLSYPS
                     FFDWPKTIEETLKKHPEISVLAVFLGPNDPWDFPVGKRYLKFASDEWAQEYLKRVDRI
                     LEAAHTHRVQVVWLGIPYMKKAKLDGQMRYLDKLLSEHLEGKIILIPTAHTLSGGEDR
                     YTDSVNVNGKPVRYRSKDGIHFTAEGQKLLAAKIMEKIVFEPSTQPSSTQP"
     gene            2697..3890
                     /locus_tag="ACJJDE_001392"
     CDS             2697..3890
                     /locus_tag="ACJJDE_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HGG7541310.1"
                     /translation="MNPKHLIAFSALFAATQAEALPVASVSLDTVTVSPSAPYTDTNG
                     LLTDYGNAAASPWMKKIRSVAQGSGETFRILQIGDSHTAGDFFTDSLRKRLQKTWGDG
                     GIGWVYPANVKGQRMAAVRHNGNWQSLTSRNNSGDFPLGGILAHTGSGGSMTLTASDG
                     KTGKQRISLFAKPLLAEQTLTVNGNTVSANGGGWQVLDTRAALPLTIQTEMPWDIGFI
                     NIENPAGGITVSAMGINGAQLTHWSKWRADRMNDLAQTGADLVILSYGTNEAFGDNID
                     IADTEQKWLDTVRQIRDSLPAAGILIIGAPESLKNTLGVCGTRPVRLTEVQQMQRRVA
                     RQGQTMFWSWQNAMGGICSMKNWLNQGWAAKDGVHFSAKGYRRAAEMLADSLEELVRA
                     AAIRQ"
     gene            complement(3950..4126)
                     /locus_tag="ACJJDE_001393"
     CDS             complement(3950..4126)
                     /locus_tag="ACJJDE_001393"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541311.1"
                     /translation="MPSENGRRQFIIFAFRRHIKRRLCAVCRRFACVLPMPEANAGCI
                     WQTVRGVAMPSEAI"
     gene            4177..5730
                     /locus_tag="ACJJDE_001394"
     CDS             4177..5730
                     /locus_tag="ACJJDE_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HGG7541312.1"
                     /translation="MNRTYANFYEMLTTACRKNGNGTAVFDGKEKTAYRALKQEAEAV
                     AAYLQNIGVKFGDTVALAVSNSTEFITAYFAISAIGAVAVPMNTFLKNSEYAYILNDC
                     KARFLFASVGLSKELAGLKAQTPIEKIIWTGKSRPVGETAEGDAFFEDVRRFPEKPDL
                     GRQPRINDLAHIIYTSGTTGHPKGALISYANLFANLNGIERIFKISKRDRFIVFLPMF
                     HSFTLTAMVLLPIYMACSIILVKSVFPFSNVLKQTLLKRATVFLGIPAIYTAMSKAKI
                     PWYFRWFNRIRLFISGGAPLAEQTILDFKAKFPRAKLLEGYGLSEASPVVAVNTPERQ
                     KARSVGIPLPGLEAKAVDEELVEVPRGEVGELIVRGGSVMRGYLNMPAATDETIVNGW
                     LKTGDFVTIDEDGFIFIVDRKKDLIISKGQNVYPREIEEEIYKLDAVEAAAVIGVKDR
                     YADEEIVAFVQLKEGMDLGENEIRRHLRTVLANFKIPKQIHFKDGLPRNATGKVLKRV
                     LKEQFDGNK"
     gene            complement(5821..7848)
                     /locus_tag="ACJJDE_001395"
     CDS             complement(5821..7848)
                     /locus_tag="ACJJDE_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HGG7541313.1"
                     /translation="MSLSEFIERRTSFNPMVILTTLFFVCVLVVLVLTVPDQVQMWLD
                     RAKEVIFTEFGWFYVLTFSIFLGFLLILSVSSLGNIRLGRDEDVPEFGFLSWLAMLFA
                     AGMGVGLMFFGVAEPLMHYFSDITAGTPEHRQQQALLHTVFHWGVHAWSVYGTIALAL
                     AYFGFRYKLPLALRSCFYPLLKEKISGRFGDAIDIMALLATFFGIITTLGFGASQLGA
                     GLQEMGWIAENSFSVQVLIIAAVMSLAVVSAISGVGKGVKVLSELNLSLAFLLLFFVL
                     AAGPTVYLLSAFGDNIGNYLGNLVRLSFKTYAYEREHKPWFESWTVLYWAWWCSWAPF
                     VGLFIARISKGRTIREFVFGVLLIPGLFGVLWFTVFGNTAIWLNDGVAGGMLEKMTSS
                     PETLLFKFFNYLPLPELTSIVSLLVISLFFVTSADSGIYVLNNITSRDKGLSAPRWQA
                     VMWGVLMSAVAVLLMRSGGLGNLQSMTLIVSLPFALLMLIMCFSLWKGLSADKKYFET
                     RVNPTSVFWTGGKWKERLVQIMSQTQEQDILKFLKHTASPAMHELQRELSEEYGLSVR
                     VDKMFHQDEPAIEFVIRKETMRDFMYGIKSVGQDVSDQLINDGKLPHIRHQTTYKPYA
                     YFFDGRVGYDVQYMNKDELIADILKNYERYLMLLDDVGQELMAHEQVELAE"
     gene            8137..10143
                     /locus_tag="ACJJDE_001396"
     CDS             8137..10143
                     /locus_tag="ACJJDE_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017628975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific recombinase"
                     /protein_id="HGG7541314.1"
                     /translation="MADMKKITPQNLRPLLSESLGHTDFVNVLNALIKFLRRGGKKCA
                     GERFDLIIDTFKQDRELLSRFSRCFYIWLAQIHIYPALIKLGIFSRHSFAREMGIRIY
                     ERFSPSYKDFANLGEVFLYLFHSENDDKWLQTLNIRQWLVLYELIRSHAEPSKLQTAG
                     IRLADARLRAIEMLSVWTASEAIEPDLIRIAPRLLEADSSFVALQRETAKLVEHYRNG
                     TTPYDTAHLEVMFDQCFSQIDYLRRKGTGAGSGSSVKVAHLLERLRQTVDRLKLLTDI
                     QTGAGNSNRLTIALMNSLIYAAVEQYSTRHLRRSSIRMLARSITENKSHHGEHYITRN
                     RKEYFKMFYSAAGGGIIIALMALLKIRIGTLGLSPFLTSLSAGFNYGIGFMIIHMLHC
                     TVATKQPAMTAASFAEQVDLNEGGKAVDNKLAKLLIDVCRSQSVAVFGNVSIAILLAC
                     AISFGYAHLYRLPILDAHTAAYQFKSIDIIAYPTLWYAAIAGLWLFCSGIIAGFFDNR
                     ADYLNLRQRLPFNPLLRKIMRPGPRRVLAAYIHKHYGSLVGNFIFGMLLGMTGYFGHL
                     LGLPLDIRHVAFSSANLGYAAVSGNVGLGTFVLGIFSVLTIGLVNLCVSFSLALFVAL
                     RSRGTKIGSIRNLIKSFWNQIKSNPCILFLPPAKEQGHPPSDKP"
     gene            10301..>10485
                     /locus_tag="ACJJDE_001397"
     CDS             10301..>10485
                     /locus_tag="ACJJDE_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7541315.1"
                     /translation="MKITHCKLKKKVQKELLHFFVLEVTARSAADILGIHPNSAALFY
                     RKIRTVINYHLALAADEV"
BASE COUNT         2517 a         3260 c         2529 g         2179 t
ORIGIN      
        1 gtcggtatcg gcagcggcgc actgttggga cattgggtaa cgcaatatgt cggtatttcc
       61 cgtatcggca tcgccggtat gcttgcggcg gcggccgggc tgtggctgtg cctgaacttg
      121 aaccgccata tccgaacctg acccgctatg ccgtctaaag cctctcccgc ccttcagacg
      181 gcattttgat tgaagaaata tccgcccctg cttaaaataa cgggctttgc cgtgttttaa
      241 cgcctatttt cttattccaa ggatggttta tgccgctgct gtctgtcgag ttcgcactgt
      301 tctttctcgc cttcctgccg atttactggg gcttggcgaa atacccgtcc gtccaaaacc
      361 tgctgctttt ggctgccggt atgggctggc tctaccatat cggccccgta tttgcggcaa
      421 tcgtcgtcct ttattcctcc tgcgtgtacc ttttgggcga actgctccgt tccgatcgcg
      481 aaaatacgcg ccgcttttgg ctggggtgcg gcattgccgt ctcgctgacc gtcttgggct
      541 ttttcaaata tttcgacttt ttccgcccgc tgattgcaca atatgccgga caaggcggcg
      601 caatcgacat cctgatgccg ctggggcttt cgtattacac cttccagtcg ctcgcctatc
      661 tggtttactg cttccgcgcc ccgcacgccg cgcgtttcga gtggcacgag ctgctgctgc
      721 acctgagttt tttccccacc gttacctccg gcccgattat ccgcgccgcc gcattcaaaa
      781 gcgcagacgg cgagcaggcg ggcgcattgg cgcaaatccg tacccgccaa ccgcgctcac
      841 ccgtccgccc cgcactcgcc gtttccctga ttctgctggg tattgccaaa aaatggtggc
      901 tggcggggat gctggcggaa aactgggtgt cgcccgtatt tgaaaatccc gcccaattcg
      961 acggctgggg cgtattgggc ggcgtgtacg gctatacctt ccaactcttt ttagactttt
     1021 ccggatattc cgatttggtt atcggcatgg cgatgctgct gggtttccgg ctgcccaaaa
     1081 acttctccgc accgcttcgt gctttaaaca tccgcgcatt ttgggacaaa tggcacatca
     1141 gcctttccac ctggatacgc gactacatct acatcccctt gggcggcagc aaaaaaggct
     1201 ttttacggac acagctcaac ctgatggcgg caatggtact ctcaggcatc tggcacggct
     1261 acggctggaa cttcctcatt tggggcgcgc tgcacggcac ggcactggtg ctgctcaaca
     1321 cgggcgatcg ctatttcgga cgcaacgcgc tatgccgtct gaaatacctt gcgccgctct
     1381 cgtggtttgt taccttccat ttcgtctgcc ttagctttgt tgtcttcaat accgcaagcc
     1441 ccgacgatgc aggcgcagtt ttcaatgccc tctttgccaa tgccaacggc tggaatgcgc
     1501 cgcaacaggc aaacatgctg ctgcttgcct cgtttgcatc cgtgatgctg ctctaccctt
     1561 acctgcaacg cgctttcgac ggcgcggtca aaggtttgga aaaaatcccg atgtggctgt
     1621 ggtttatccc cgtttccgcc gtcctgctgc tgattatcgt attggccccc tcggggattc
     1681 ccggctttat ttatgccaat ttttaagggt ttggacatga aaaactttct ttcccttttc
     1741 gcctccatac tgatgtctgc cctgattgcc gtgtggttca gccaaaaccc catcaacgcc
     1801 tactggcagc agacctacca ccgcaacagt ccgctcgaac cgcttgccgc ctacggatgg
     1861 tggcggagcg gtgcggcgtt gcaagaaaac gcctacacct tttcagacgg catcaaagcc
     1921 ttcctgtccg gcgaaacgcc gtcgacggct caaggcggcg gttcggcaga tatgccgtct
     1981 gaagccgccg catcagaagc cgtccctcaa accggtaaaa cagaatggaa acaagacacc
     2041 gaagccgccg ccgtccgcag cggcgacaaa gtcttttttg ccggcgactc gctgatgcag
     2101 ggcgttgcac ccttcgtgca aaaaagcctg aaacagcaat acggcatcga atccgtcaac
     2161 ctcagcaaac aaagcacggg gctgtcctac ccctcattct tcgactggcc gaaaacgatt
     2221 gaagaaaccc tgaaaaaaca tcccgaaatc agcgtgctcg ccgtcttcct cggcccgaac
     2281 gacccgtggg atttccccgt cggcaaacga tacctcaaat tcgcttccga cgaatgggcg
     2341 caagaatacc tgaaacgcgt cgaccgcatc cttgaagccg cacacacgca ccgcgtccaa
     2401 gtcgtctggc tcggcatccc ctatatgaaa aaagccaagc tcgacgggca gatgcgctac
     2461 ctcgacaaac tgctttcgga acacctggaa ggcaaaatca tcctgattcc caccgcgcac
     2521 accctgagcg gcggggaaga ccgctacacc gactccgtca acgtcaacgg caaacccgtc
     2581 cgctaccgca gcaaggacgg catacacttt accgccgaag gacaaaaact gctggcggca
     2641 aaaataatgg aaaaaatcgt ttttgaacca agtacgcaac catcaagtac acagccatga
     2701 accccaaaca cctcatcgca ttttccgccc tgttcgccgc cacgcaggca gaagccctgc
     2761 ccgtcgcctc cgtcagcctc gacaccgtta ccgtttcccc gtccgccccc tacaccgata
     2821 caaacgggct cttgaccgac tacggcaacg ccgccgcctc gccttggatg aaaaaaatcc
     2881 gatccgtcgc acaaggcagc ggcgagacct tccgcatcct gcaaatcggc gactcgcata
     2941 ccgccggcga cttctttacc gacagcctgc gcaaacgcct gcaaaaaact tggggcgacg
     3001 gcggcatagg ctgggtttac cccgccaacg tcaaagggca gcgcatggcg gcagtccggc
     3061 acaacggcaa ctggcaaagc ctcaccagca ggaacaatag cggagacttc ccgctcggcg
     3121 gcatcctcgc ccacaccggc agcggcggca gcatgaccct gaccgcatcg gacggcaaga
     3181 ccggcaaaca gcgcatttcc ctgtttgcca aacccctgct cgccgaacaa accctgaccg
     3241 tcaacggcaa caccgtctcc gccaacggcg gcggctggca ggtactggat acccgcgcgg
     3301 cactgccctt gaccatacag accgaaatgc cgtgggacat cggcttcatc aacatcgaaa
     3361 atcccgccgg cggcattacc gtttccgcca tgggcatcaa cggcgcacaa ttgacccatt
     3421 ggtcgaaatg gcgtgccgac cgtatgaacg accttgccca aaccggcgcc gatttggtta
     3481 tcctttccta cggcaccaac gaagccttcg gcgacaacat cgacattgcc gacaccgaac
     3541 aaaaatggct ggataccgtc cgccaaatcc gcgacagcct gcctgccgcc ggcatcctca
     3601 tcatcggcgc acccgaatcc ctgaaaaaca cgctcggcgt atgcggcaca cgccccgtcc
     3661 gcctgaccga agtccaacag atgcagcggc gcgtcgcccg acaggggcag acgatgttct
     3721 ggtcttggca aaacgccatg ggcggcatat gcagcatgaa aaactggctc aaccaaggat
     3781 gggccgccaa agacggcgta cacttctccg ccaaaggcta ccggcgcgcg gcggaaatgc
     3841 tcgccgacag cctcgaagaa ctcgtccgcg ccgccgcaat caggcaataa tcggacaggg
     3901 ggcggacggt atttccgcaa cagggggatg ccgtctgaaa cgcatacctt catattgctt
     3961 cagacggcat agccaccccg cgcacggttt gccagatgca accggcattc gcctcaggca
     4021 tcggaaggac gcaggcgaac ctccggcata cggcgcaaag gcggcgtttg atatgccgtc
     4081 tgaaggcaaa gatgataaac tgccgccttc cgttttcaga cggcatattg ttttcaaatg
     4141 agggcgttcg ccgtccgcaa ccataaagga agtttcatga accggactta tgccaatttc
     4201 tacgaaatgc tgaccaccgc ctgccgcaaa aacggcaacg gcacggcagt gttcgacggc
     4261 aaggaaaaaa ccgcctaccg cgcgctcaag caggaggccg aagccgtcgc ggcgtatctg
     4321 caaaatatcg gcgtgaagtt cggcgacacg gtcgcgctgg cggtttccaa ttccacagaa
     4381 tttattaccg cctatttcgc catctccgcc atcggcgcgg tcgccgtacc gatgaacaca
     4441 tttttgaaaa acagcgaata cgcgtatatc ctgaacgact gcaaggcgcg cttcctgttc
     4501 gcctcggtcg gcctgtcaaa agaattggcg ggcttgaagg cgcaaacgcc catcgaaaaa
     4561 atcatttgga cgggcaaaag ccggccggtc ggcgaaacgg cggaaggcga tgcctttttt
     4621 gaagacgtgc gccgcttccc cgaaaaaccc gacttgggcc gacaaccccg gataaatgat
     4681 ttggcacaca tcatctacac ctccggcacg acggggcatc ccaaaggcgc gctaatcagt
     4741 tacgccaacc tgttcgccaa cctgaacggc atcgaacgca tctttaaaat ttccaaacgc
     4801 gaccgcttta tcgttttcct gccgatgttc cacagcttca cgctgacggc tatggtgctg
     4861 ctgccgattt atatggcgtg ttcgattatt ttggtcaaat ccgttttccc gttttccaat
     4921 gttttgaaac agaccctgct caaacgcgcg accgtgtttt tgggcatacc cgcgatttac
     4981 accgcgatga gcaaggcgaa aatcccttgg tatttcagat ggttcaaccg cattcgcctg
     5041 tttatcagcg gcggcgcgcc tttggcggaa caaaccatcc tcgatttcaa agccaagttc
     5101 ccccgcgcca aattgctgga aggctacgga ctgagcgaag cctctcccgt cgtcgccgtc
     5161 aatacgcccg agaggcaaaa agcccgcagc gtcggcatcc ccctgcccgg tttggaagcc
     5221 aaagccgtcg atgaagaatt ggtcgaagtg ccgcgcggcg aagtgggcga actgattgtc
     5281 aggggcggtt cggtgatgcg gggctacctc aatatgcctg ccgccaccga tgaaaccatc
     5341 gtcaacggct ggttgaaaac gggcgatttc gttaccatag acgaagacgg cttcatcttt
     5401 atcgtcgacc gcaaaaaaga tttgattatt tccaaaggtc aaaatgtcta tccgcgcgag
     5461 atcgaagaag aaatctacaa actcgatgcc gtcgaagccg ccgccgtcat cggcgtgaaa
     5521 gaccgttatg ccgacgagga aatcgtcgcc ttcgtccaat tgaaggaagg tatggatttg
     5581 ggcgagaacg aaatccgccg ccacctgcgt accgtgctgg caaatttcaa aatccccaaa
     5641 caaatccact ttaaagacgg gctgccgcgc aacgctacgg gcaaggtatt gaaacgggtg
     5701 ttgaaggagc agtttgacgg aaacaaatga acgccgtgcc gtccgaagcc ccgtccggca
     5761 aaaaaaatgc ggtgaatctg cttcaccgca tttttttggc aaacgccgga gcgaggatat
     5821 ttactctgcc aattccacct gctcgtgcgc catcagttcc tgaccgacat catccaacaa
     5881 catcaaataa cgttcgtagt ttttcaaaat gtcggcaatc agctcgtcct tgttcatata
     5941 ctgcacatcg tacccgacgc gcccgtcgaa aaaataagcg tagggtttgt aagttgtctg
     6001 atgccggata tgcggcagct tgccgtcgtt aatcaactgg tcggatacat cctgcccgac
     6061 agacttaatc ccgtacataa aatcgcgcat cgtctctttc cgaatgacga actcgattgc
     6121 gggctcgtcc tgatgaaaca tcttatcgac ccggacgctc aagccgtatt cttccgaaag
     6181 ctcccgttgc aactcgtgca tagcgggcga tgcggtatgt ttgaggaatt ttaaaatatc
     6241 ctgctcctgc gtctggctca ttatctgcac cagccgttct ttccacttgc cgcccgtcca
     6301 aaatacactg gtagggttaa cccgggtctc aaaatatttc ttatccgcac tcaagccttt
     6361 ccacaggctg aaacacatta tcagcatcag cagggcaaac ggcagggaaa caatcagggt
     6421 catagactgc aggttgccga gtccgcccga gcgcatcagc aaaacggcaa cggcagacat
     6481 cagcacgccc cacataaccg cctgccaccg tggcgcgctc aagcctttgt cccgagaggt
     6541 aatattgttc aggacataaa tcccggaatc ggcagaagtt acaaaaaaca gagaaatgac
     6601 cagcaggctg acgatgctcg tcaattcggg cagggggagg taattaaaga atttaaaaag
     6661 cagcgtttcc ggagaggagg tcatcttttc gagcattccc cccgcaaccc cgtcattcag
     6721 ccaaatcgcc gtattgccga agacggtaaa ccacaaaacg ccgaacaggc cggggatgag
     6781 caaaaccccg aagacaaact cgcggatggt gcgccccttt gaaatgcgcg cgataaacaa
     6841 acccacaaac ggcgcccaag aacaccacca cgcccaataa agcaccgtcc aagattcaaa
     6901 ccacggcttg tgttcccgtt cgtacgcata agttttaaaa ctgaggcgca ccagatttcc
     6961 gaggtagttc cctatgttgt cgccgaatgc cgacaacagg taaacagtgg gacccgccgc
     7021 caaaacaaaa aacagcagca aaaacgcaag gctcaggttc aactcgctca acaccttcac
     7081 gcccttcccc acgccggata ttgccgaaac gacggcgagg gacatgacgg cggcgataat
     7141 caaaacctgc acgctgaagc tgttttcggc aatccagccc atttcctgca atccggcgcc
     7201 cagttgcgaa gccccgaacc ccaatgtggt gatgatgccg aaaaaagtag caagcaacgc
     7261 cataatatca atggcatcgc cgaaccttcc ggaaattttt tctttcaaca ggggataaaa
     7321 acaagaacgc agggcaagcg gcagcttgta gcggaaaccg aaataagcca aagccaatgc
     7381 aatcgtaccg tacaccgacc aagcgtgaac gccccaatgg aacaccgtgt gcagcaatgc
     7441 ctgctgctgc ctgtgttccg gcgtgccggc cgtaatgtcc gaaaaataat gcatcaacgg
     7501 ctctgccacg ccgaaaaaca tcagacccac gcccatcccg gccgcaaaca gcatcgccag
     7561 ccacgacagg aagccgaatt ccggcacatc ttcatcccgt ccgagcctga tgtttcccaa
     7621 actgctgacc gagagtatca gcaggaaacc cagaaaaatg gaaaacgtta aaacataaaa
     7681 ccagccgaac tcggtaaaaa tgacttcttt tgcccgatcg agccacatct gcacctgatc
     7741 cggcacggtt aaaaccaata ccaccaaaac acacacaaaa aacaaagtcg tcaaaataac
     7801 catcggatta aatgacgttc ggcgttctat aaattcagac agggacaaac cttctcactc
     7861 ctttgttaaa aacagacaaa cccggtcatc gggcaaagcg gtcaaaacct gccgacaaaa
     7921 taccggcttc cggatgacga aatgcacaaa ccggccgaaa ttgttataat cgaaaaaatt
     7981 aaaaatcaat acggattatt ctatcagatt gatttatcga tatttattat atcattaata
     8041 tagtttgatt tcaaaccggc ggaaaatgcg ccgccttccg caggcgcgcc ctccccgcca
     8101 tcggggcgtt taacgccgga ttgccgatgc ggtacaatgg ctgatatgaa gaaaattacc
     8161 cctcaaaacc tgcgccccct gctttcggaa agcttgggac ataccgattt tgtcaacgtc
     8221 ctcaacgcac tgattaaatt tttgcgccgt ggcggcaaaa aatgtgcggg ggagcgtttc
     8281 gacctgatta tcgacacatt caaacaagac agggaattgc tgtcccgctt cagccggtgt
     8341 ttttacatct ggctcgcgca aatacacatt tatccggcac tcatcaaact cggcatcttc
     8401 tcgcgccaca gctttgcccg agaaatgggc atacgcatct acgaacgctt cagcccgtca
     8461 tataaagatt ttgccaactt gggcgaagtc ttcctttatc ttttccattc cgaaaacgac
     8521 gacaaatggc tgcaaacgct caatatccgc caatggctgg ttttatacga actcatccgg
     8581 agccacgccg agccgtccaa attgcagacg gcgggcatcc gccttgccga tgcgcgtttg
     8641 cgcgccatcg aaatgctgtc tgtctggacg gcatccgaag ccatcgaacc cgacctcatc
     8701 cgcatcgccc cgcgcctgct ggaagccgat tcttccttcg tcgccctcca acgcgaaacc
     8761 gccaaactgg tcgaacacta ccgcaacggc accacgcctt acgacaccgc ccacctcgaa
     8821 gtgatgttcg accaatgttt cagccagatt gactatttgc gccgcaaagg gacgggcgcc
     8881 ggctccggtt cgtcggtcaa agtcgcccac ctgctcgaac ggctccggca gaccgtagac
     8941 cgtctaaagc tgctcaccga catccaaacc ggtgccggca acagcaaccg cctgaccatc
     9001 gcgctgatga actccctcat ctacgcggcg gtcgaacaat acagcacccg ccacctgcgc
     9061 cgcagcagca tccgtatgct cgcccgcagc attaccgaaa acaaaagcca ccacggcgaa
     9121 cactacatca cccgcaaccg caaagaatat ttcaaaatgt tctactcggc ggcaggcggc
     9181 ggcatcatca tcgccctgat ggcgctgctc aaaatccgca tcggcacact cggcctcagc
     9241 cccttcctga cttccttgtc ggctgggttc aactacggca tcggctttat gatcatccat
     9301 atgctgcact gcaccgtcgc caccaagcag cccgcgatga ctgccgccag ctttgccgaa
     9361 caggtcgatc tcaacgaagg cggcaaagcg gtggacaaca aactcgccaa gctcctcatc
     9421 gacgtatgcc gctcccaaag tgtcgccgtc ttcggcaacg tttccatcgc catccttttg
     9481 gcgtgcgcca tatcgttcgg ctatgcccat ctgtaccggc tgcccatact cgatgcccac
     9541 accgccgcct accagttcaa atccatagac atcatcgctt acccgacgct gtggtatgcc
     9601 gccattgcag gtctgtggct gttctgctcc ggcatcatcg caggtttttt cgacaaccgc
     9661 gccgactacc tcaacctgcg ccaacgcctg cccttcaacc ccttgctgcg taaaatcatg
     9721 cgccccgggc cccgccgcgt cctcgccgcc tacatccaca aacactacgg ctcgttggta
     9781 ggcaacttca tcttcgggat gctcttgggt atgaccggct atttcggaca cctcctcggg
     9841 ctgccgctgg acatccgcca cgtcgccttt tcctccgcca acctcggcta tgccgccgtc
     9901 agcggcaacg tcggtttggg cacgttcgta ctcggcattt tcagcgtcct caccatcggc
     9961 ctggtcaacc tctgcgtcag tttcagcctc gccctcttcg tcgccctgcg ctcgcgcggc
    10021 acgaaaatcg gcagcatccg caatctgatt aagagttttt ggaatcagat taaaagcaat
    10081 ccctgcatac ttttcctccc gcccgccaaa gaacagggac atcctccttc ggacaagcct
    10141 tgaccggcaa tgccgtctga agcgggcttc tccccgaata ccgccctgat gcggaaaatc
    10201 cccataaaag gatgcaaaaa tgccgtctga accgaaacgt ggttcagacg gcattttaaa
    10261 aggggctgta ctagattagc agatatgtta ccctcgaaat atgaagataa cgcactgcaa
    10321 attaaagaaa aaagtacaga aagaactgct ccattttttt gtactggaag ttaccgcccg
    10381 ttctgccgcc gatattttgg gtatccatcc caattcggca gcactgttct accgtaaaat
    10441 ccgcacggtt atcaactatc atttggcctt ggctgccgat gaggt
//
LOCUS       DBBZXU010000064        10410 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.064, whole genome shotgun sequence.
ACCESSION   DBBZXU010000064 DBBZXU010000000
VERSION     DBBZXU010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10410
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.064"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            57..296
                     /locus_tag="ACJJDE_001398"
     CDS             57..296
                     /locus_tag="ACJJDE_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541316.1"
                     /translation="MNVWDIWGRMVEIYHKYKKPCLVLAVDFVMGMVFIEPNEEPCIG
                     RCYAPMSESPDFANAVAMAVAMICIVWIAVLSMTD"
     gene            510..1811
                     /gene="bioA"
                     /locus_tag="ACJJDE_001399"
     CDS             510..1811
                     /gene="bioA"
                     /locus_tag="ACJJDE_001399"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004015 -
                     adenosylmethionine-8-amino-7-oxononanoate transaminase
                     activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HGG7541317.1"
                     /translation="MPSEHQHTSSLLDFDRTHLLHPYTSMTDPLPVYPVKRAEGVFIE
                     LADGTRLVDGMSSWWCAIHGYNHPVLNQAVETQIKQMSHVMFGGLTHEPAVELGKLLV
                     GILPQGLDRIFYADSGSVSVEVALKMAVQYRQVRGLTAKQNIATVRRGYHGDTWNAMS
                     VCDPETGMHHIFGSALPQRYFVDNPTSRFDDEWDEADLQPVRALFEVHHADIAAFILE
                     PVVQGAGGMYFYHPQYLRGLRDLCDEFDIVLIFDEIATGFGRTGKMFACEHAEVVPDI
                     MCIGKGLSGGYMTLAAAITSQKVTETISRGEAGVFMHGPTFMANPLACAVACASVKLL
                     LSQDWQANIRRIESILKGRLKAAWDIRGVKDVRVLGAIGVIELDKGVDMARFQADCVA
                     QGIWVRPFGRLVYLMPPYIISDGVLTKLADKTVQILKEHSK"
     gene            1808..2455
                     /gene="bioD"
                     /locus_tag="ACJJDE_001400"
     CDS             1808..2455
                     /gene="bioD"
                     /locus_tag="ACJJDE_001400"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004141 - dethiobiotin synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009102 - biotin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dethiobiotin synthase"
                     /protein_id="HGG7541318.1"
                     /translation="MKGVYFVSGIDTDIGKTVATGMLAKQLLQQGKSVITQKPVQTGC
                     QDIAEDIAVHRKIMGIPMQEADKQGLTMPEIFSYPASPHLAARLDGRALDLDKIRTAT
                     QQLAAQYEIVLVEGAGGLMVPLTENLLTIDYIRQQGYPVILVTSGRLGSINHTLLSFA
                     ALKQYGIRLHSLIFNHIHDSSDECVAQDSLSYLKCRLKADFSEAEWMELAKTDAV"
     gene            2470..2946
                     /locus_tag="ACJJDE_001401"
     CDS             2470..2946
                     /locus_tag="ACJJDE_001401"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008813 - chorismate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HGG7541319.1"
                     /translation="MEHLFGKWLPDLPTPISDGISLPMVRLLHTRSLTAALRALPHTF
                     SVELLKLGELETECGGRLVREVLLKLDGIPVVAARSECRIGSAFWQNILDCGTRPLGE
                     RLFQADLEGARSAFEFAVFGEGCGRYFAARRSRFSHHGEEMLLTEYFLPELKRFIG"
     gene            2976..3866
                     /gene="ubiA"
                     /locus_tag="ACJJDE_001402"
     CDS             2976..3866
                     /gene="ubiA"
                     /locus_tag="ACJJDE_001402"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HGG7541320.1"
                     /translation="MNPKSPLFLRLSDRLDVYIRLMRADKPIGTLLLLWPTYWALWLA
                     SDGIPDLAVLAAFTIGTFLMRSAGCVINDFADRDFDGAVERTKNRPFAQGRVKKKEAL
                     LLTAFLCLLAALCLIPLNHLTWLMSLPALFLALTYPFTKRFFPIPQLYLGLAFSFGIP
                     MAFAAVAGNVPPQAWILFAANVLWTLAYDTVYAMADKEDDLKIGIKTSAVTFGRYDIA
                     AVMLCHGGFTLLMAVLGAVIGAAWAYWTAIPIVLLLQYRQYAAIKSRVRQICFETFLA
                     NNRIGWVWFTAIFAHTFFAK"
     gene            4051..4500
                     /gene="ptsN"
                     /locus_tag="ACJJDE_001403"
     CDS             4051..4500
                     /gene="ptsN"
                     /locus_tag="ACJJDE_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HGG7541321.1"
                     /translation="MSLIGEILPLSHIVLDMEVGSKKRLFEEAGLLLERESSLSHADV
                     FECLFAREKLGSTGLGQGVAIPHGRHAGVKQATGAFIRTREPVGFDAPDGKPVSLVFI
                     LLVPENATGEHLEVLSKLAGKFSQKSIRESLMTVSSAEEARAILTEE"
     gene            4504..5466
                     /gene="hprK"
                     /locus_tag="ACJJDE_001404"
     CDS             4504..5466
                     /gene="hprK"
                     /locus_tag="ACJJDE_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006109 - regulation of carbohydrate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr(Ser) kinase/phosphatase"
                     /protein_id="HGG7541322.1"
                     /translation="MPSISVRRLFDDNQYKLQLAWAAGNSGADNRIGVEADKPVLALV
                     GHLNFIHPNQIQVVGLAESEYLNRLESGETGYQFGDLFDISMSLVIVANGLPVSPGLR
                     DYCHKNDIPLLTSKLESPYLMDVLRIYLQRTLAASSVKHGVFLDVFEIGVLITGHSGL
                     GKSELALELISRGHSLIADDAVELFRIGPETLEGRCSPMLRDFLEVRGLGILNIRHIF
                     GETSIRPKKILQLIINLVEADDEYMKQLDRLSIRTETESILNVNVRSVTLPVAVGRNL
                     AVLVEAAVRNYILQLRGKDSTREFLERHQTQLKENEQNHENRPD"
     gene            5447..6301
                     /gene="rapZ"
                     /locus_tag="ACJJDE_001405"
     CDS             5447..6301
                     /gene="rapZ"
                     /locus_tag="ACJJDE_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HGG7541323.1"
                     /translation="MKIVLISGLSGSGKSVALRQMEDSGYFCVDNLPLEMLPALVSYH
                     IERADETELAVSVDVRSGIDIGQAREQIAYLRGLGHRVEVLFVEAEESVLVRRFSETR
                     RGHPLSNQDMTLLESLKKEREWLFPLKEIAYCIDTSKMNAQQLRHAVRQWLKVERTGL
                     LVILESFGFKYGVPNNADFMFDMRSLPNPYYDPELRPYTGMDKPVWDYLDGQPLVQEM
                     VDDIERFVTHWLPRLEDESRSYVTVAIGCTGGQHRSVYIVEKLARRLKGRYELLIRHR
                     QAQNLPSR"
     gene            6383..7324
                     /gene="ylqF"
                     /locus_tag="ACJJDE_001406"
     CDS             6383..7324
                     /gene="ylqF"
                     /locus_tag="ACJJDE_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HGG7541324.1"
                     /translation="MAIQWFPGHMNKAKKAIAERAKSVDMVIEMLDARMPASSENPLL
                     AQLSKGKPKLKILNKQDLADPERTKVWLDHYNSRPDTRAIALDSSETGAHGKITQACR
                     AMIPHRQGIDKPLRVLICGIPNVGKSTLINGMIGKKSAKTGNEPGITKAEQRLFLADD
                     FWLYDTPGMLWPKIIVEESGYNLAAGGSVGRNALDEEEVALELLDYLRRHYLPMLQER
                     YQADKDPSSHWDENVWLEWIAKKRGAVLSGGRINYQKAAENILTDFREGKIGRITLET
                     PNQWETWLKKARQKEAELKAIREARKAERKGQKPADE"
     gene            complement(7415..7535)
                     /locus_tag="ACJJDE_001407"
                     /pseudo
     CDS             complement(7415..7535)
                     /locus_tag="ACJJDE_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            7599..8201
                     /locus_tag="ACJJDE_001408"
     CDS             7599..8201
                     /locus_tag="ACJJDE_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0051304 - chromosome separation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HGG7541325.1"
                     /translation="MTEKLPPDALIEAALLTQAEPLNEKTMRELCVPPLSQDKLIDVL
                     AQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQ
                     QPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
                     GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN"
     gene            8385..10058
                     /gene="recN"
                     /locus_tag="ACJJDE_001409"
     CDS             8385..10058
                     /gene="recN"
                     /locus_tag="ACJJDE_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HGG7541326.1"
                     /translation="MLLTLSLRDFVIVENLNLDFQSGFTVLTGETGAGKSITLDAIGL
                     LLGDKADYSQVRSGAKEAQLSALFDISHLPVLKAELYEQGLLNDGEEELSIRRIIDAK
                     GKSRSFINNQAATLAQLKSVGSQLIDIHGQNAHHSLNQEAAQRELLDAFAGSREQAET
                     VRQLYQNWANAKKALQEAQEHADAVIIERERLEWQFNELNQLDIKQGEWEALSQSHDS
                     LAHSAELLQAAEEVGSKIDGDNGIQRHIYQCQKLLANLQNIEPRFAESLNMLASIEAE
                     LGEISANMRDVAGRSDINPNELAAQEQRMGELMGMARKYRIEPEELPAKLAEIEERLQ
                     SLQAAADLDALEHNVAHNFAEYQEAAHILSAMRHQAAERLSGETTEHMQHLAMKGARF
                     DIVLLPSSPTAHGLEQVQFQVAANKGNPPRPLNKVASGGELARISLALQVVASQYTQV
                     PTLIFDEVDTGIGGGVAEMVGKALRSLGRKHQVLAVTHLPQVASCGENHWRVRKHSEG
                     EQTVSEISILDKIQRVEEVARMLGGEVITDTTRQHAAELLQLASKNSLF"
     gene            10168..10244
                     /locus_tag="ACJJDE_001410"
     tRNA            10168..10244
                     /locus_tag="ACJJDE_001410"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10202..10204,aa:Arg,seq:acg)
     gene            10262..10336
                     /locus_tag="ACJJDE_001411"
     tRNA            10262..10336
                     /locus_tag="ACJJDE_001411"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:10295..10297,aa:Glu,seq:ttc)
BASE COUNT         2526 a         2597 c         2834 g         2453 t
ORIGIN      
        1 ctataaaata gggctgtaac cttcaatcgg aatttgttgc ctgcgggata tgcggtatga
       61 atgtttggga tatatggggc aggatggtgg aaatctatca taagtataag aagccgtgcc
      121 tggttttggc ggtggatttt gtgatgggta tggtattcat agagccgaat gaggagccgt
      181 gcatcggcag atgctatgcg cctatgtcgg agtcccctga ttttgccaac gctgttgcga
      241 tggctgttgc tatgatctgt atcgtatgga ttgccgtttt gtctatgact gattgaagcg
      301 ttgggcggag gctgcgtgaa acggtattgg gcgttgggcc gtctgattcc aatcgggctt
      361 gaggaatgcg aaacggtgtg cgcttatgtt gcggaacgat ttgtttcgcg gttttgcgcc
      421 cgaaacggat ggagaggtgt gggaaacggt ctgtcggagt agaatacgcg tttgcgtttg
      481 aatgcagcaa taagaaaaga gagaaactta tgccgtctga acatcaacac acatcatcat
      541 tacttgattt cgaccgtacc catctgctcc atccctatac ttccatgacc gatccgcttc
      601 ccgtttatcc tgtcaaacgt gcagaagggg tgtttatcga attggcggac ggcacgcggc
      661 tggttgacgg gatgtcgtcc tggtggtgtg cgatacacgg ttacaatcat cctgttttga
      721 atcaggcggt tgagacgcag attaaacaaa tgtcgcatgt gatgttcggc ggtttgacgc
      781 atgagcctgc ggtggagctg ggtaaattgt tggttgggat tttgccgcag gggttggacc
      841 gtatttttta tgcggattca ggttcggttt cggtggaagt tgcgttgaaa atggcggtgc
      901 aataccggca ggtgcggggg ttgacggcga agcagaatat tgcgacggtg cggcgcgggt
      961 atcacggcga tacttggaac gcgatgtccg tctgcgatcc ggaaacgggg atgcaccata
     1021 ttttcggcag cgcgttgccg cagcgttatt ttgtcgataa cccgacaagc cgtttcgacg
     1081 atgaatggga cgaggcggat ttgcagcctg tccgcgcctt gtttgaagtg catcatgcgg
     1141 atattgccgc ctttatttta gagccggtcg tgcagggcgc gggcggcatg tatttttatc
     1201 atccgcagta tcttcgcgga ttgcgcgatt tgtgcgacga gtttgatatc gttttgattt
     1261 ttgatgaaat cgccaccgga ttcgggcgca cgggcaagat gtttgcctgc gaacacgcgg
     1321 aggtcgtgcc ggatattatg tgcatcggca agggtttgag cggcggctat atgacgctgg
     1381 cggcagcaat cacttcgcaa aaagttaccg aaacgatttc gcgcggcgaa gcgggcgtgt
     1441 ttatgcacgg cccgacgttt atggcaaacc cgctggcgtg tgccgttgcc tgcgcttcgg
     1501 tcaaactgct tttgtctcaa gactggcagg caaatatccg ccgcattgaa agcatcttaa
     1561 aaggccgtct gaaagccgcg tgggacattc gcggcgtgaa agacgtacgc gttttgggtg
     1621 ccatcggcgt gatcgagctg gataaaggcg tggatatggc gcgttttcaa gcagattgcg
     1681 tggcacaggg catttgggtg cgcccgttcg gcaggctggt atatctgatg ccgccgtata
     1741 ttatttcaga cggcgttttg accaaacttg ccgacaaaac cgtgcaaatc ttgaaggaac
     1801 acagcaaatg aaaggcgttt acttcgtcag cggcatagac acggacatcg gcaaaactgt
     1861 cgccaccggt atgttggcaa aacaattgtt gcagcagggc aaaagcgtga tcacgcaaaa
     1921 gcccgtgcaa accggttgcc aagacatcgc cgaagacatc gccgttcacc gcaaaatcat
     1981 gggcatcccg atgcaggaag cggacaaaca agggctgacc atgcctgaaa tcttcagtta
     2041 tccagcttcg cctcatctcg ctgcccgtct tgacggcagg gctttggact tggacaaaat
     2101 ccgcaccgcc acgcagcaac tggcggcgca atacgaaatc gtcttggtcg aaggcgcggg
     2161 cggattgatg gttccgctga cggaaaacct gttaaccatt gattatatcc gtcagcaagg
     2221 ctatcccgtc atcctcgtta ccagcggacg gcttggcagt atcaaccaca ctttactcag
     2281 tttcgccgcg ctcaaacaat acggcatccg cctgcacagc ctgattttca accatattca
     2341 cgacagttcc gacgaatgtg tcgcccaaga cagcctgagc tacttgaaat gccgtctgaa
     2401 agccgatttt tccgaagcgg aatggatgga gttggcaaaa acagacgcgg tataaagatt
     2461 gggaaaaata tggaacacct atttgggaaa tggctgcccg acttgcccac ccccatttca
     2521 gacggcatca gcctgccgat ggtgcggctg ctgcacaccc ggtcgctgac cgccgcattg
     2581 cgcgccttgc cgcatacatt ttcggtggaa ctgctgaaac tgggcgaatt ggagacggaa
     2641 tgcggaggga ggctggtgcg cgaagttttg ttgaagctgg acggtatccc tgttgtcgcg
     2701 gcaaggagcg agtgccggat aggttcggcg ttttggcaaa acattttgga ctgcggcacg
     2761 cgtcctttgg gcgaacgtct gtttcaagcc gatttggaag gggcgcgttc ggcgtttgag
     2821 tttgccgttt tcggcgaagg atgcggacgg tactttgccg ctcggcgttc gcggttttcc
     2881 catcacggcg aggaaatgct gctgaccgag tattttctgc ccgaactgaa acgctttatc
     2941 ggataaaata ccgttttttc aagctgcgcg gcaatatgaa tcctaaatcc cctttatttt
     3001 tacgcctgtc cgatcgtttg gacgtttata tcagactgat gcgggcggac aagcccattg
     3061 ggacgctgct tttgctgtgg ccgacctact gggcgttgtg gctggcttca gacggtattc
     3121 ccgatttggc ggtattggcg gcgtttacaa tcggcacgtt tttaatgcgc agtgccggct
     3181 gcgtcatcaa cgattttgcc gaccgcgatt ttgacggggc tgtcgagcgc actaaaaacc
     3241 gtccgttcgc acagggcagg gtcaagaaaa aagaagcgct gctgctgacg gcatttttgt
     3301 gcctgcttgc cgcattgtgc ctgattccgc tgaatcatct gacatggctg atgagcctgc
     3361 ccgcgctgtt tcttgcgctg acttacccgt ttaccaaacg cttttttccg attccccaac
     3421 tctatctcgg gcttgccttt tccttcggta tcccgatggc gtttgccgcc gttgccggaa
     3481 acgtgccgcc tcaagcgtgg atactctttg ccgccaatgt gttatggact ctggcgtatg
     3541 acacggttta tgcaatggcg gacaaagaag acgatttgaa aatcggcatc aaaacctccg
     3601 ccgtcacgtt cgggcgttac gacatcgccg ctgttatgct gtgtcatggc ggctttaccc
     3661 tgctgatggc agtattgggg gcggttatcg gtgcggcatg ggcatattgg acggcaatcc
     3721 ccatcgtcct gctgctgcaa taccgccaat atgccgccat caaaagccgc gtccggcaaa
     3781 tctgttttga aacgtttttg gcaaacaaca gaattggttg ggtgtggttt accgccattt
     3841 ttgcccatac gtttttcgcg aaataaggca gggcaatgcc gtctgaagag ccgtaaactg
     3901 ctttggacgg catttctatc tgtgccgaaa agcgttaaaa tatgttttta aaacgctgtg
     3961 ttatgtcagc ccgtaccgta tgcgggattg agatttgccc cggcagtcgg tacaatcttt
     4021 ctgttttgcg atgtctgaaa agagaagctt atgagcctta tcggcgaaat tttgcctttg
     4081 tcccatattg ttttggatat ggaggtgggc agtaaaaaaa ggctgtttga ggaagcaggc
     4141 ctgcttttgg aacgcgaatc ctcattgtcc catgctgatg ttttcgaatg tctttttgcc
     4201 cgtgaaaaac tcggttcgac cggtttgggg cagggcgttg ccatcccgca cggccgtcat
     4261 gccggcgtga agcaggcgac gggcgcgttc atccgcacgc gcgaacccgt cggatttgac
     4321 gcaccggacg gcaaaccggt ttccctggtt tttatcttgc tggttcctga gaatgcaacg
     4381 ggcgagcatt tggaggtatt gtccaaactg gccggcaagt tttcccaaaa aagcatccgc
     4441 gaatcgctga tgacggtttc ttctgcggaa gaagcccgcg ccatcctgac cgaagaataa
     4501 aatatgccca gtatctctgt ccgccgactg tttgacgaca accaatacaa gttgcaactt
     4561 gcctgggccg ccggcaattc gggtgcggac aaccgtatcg gcgtagaggc ggacaagccc
     4621 gtcctcgctt tggtcggaca cctgaatttc atccacccca accaaatcca agtggtcggt
     4681 ttggcggagt cggaatatct gaaccgtctc gaatcggggg aaacgggtta tcagttcggc
     4741 gacctgttcg acatttctat gtctttggtt attgtggcaa acggcttgcc ggtttccccg
     4801 ggactgcgcg actactgcca taaaaacgat attccactgc tgacttccaa actcgaaagc
     4861 ccctatctga tggacgtgtt gcggatttac ctgcaacgca ccctggcggc atcgtccgtc
     4921 aaacacggcg tatttctcga tgtgtttgaa atcggcgtgc tgattaccgg acattcgggt
     4981 ttgggtaaga gcgaattggc gttggagctg atttcgcgcg gccacagcct gattgccgac
     5041 gatgcggtcg agctgttccg catcggcccg gaaacgctgg aagggcggtg ttcgcctatg
     5101 ctgcgcgatt ttttggaagt gcgcggcttg gggatactca atatccgcca tattttcggc
     5161 gaaacttcca tccgccccaa aaaaatcctg caactcatta tcaatttggt cgaggcagac
     5221 gacgagtata tgaagcagct cgaccggttg agtatccgca ccgaaaccga atccatcctc
     5281 aacgtcaacg tccgttcggt aacgctgcct gtcgcggtcg gacgcaacct tgccgtattg
     5341 gttgaagcgg cggtacgcaa ttacattttg cagttgcgcg gtaaggacag tacgcgcgaa
     5401 tttttggaac gccatcagac gcaacttaaa gaaaacgaac agaatcatga aaatcgtcct
     5461 gattagcggg ttgtccggtt cgggcaaatc cgtcgcactg cgccaaatgg aagattcggg
     5521 ttatttctgc gtggacaatt tgcctttgga aatgttgccc gcgctggtgt cgtatcatat
     5581 cgagcgtgcg gacgaaaccg aattggcggt cagcgtcgat gtgcgttccg gcattgacat
     5641 cggacaggcg cgggaacaga ttgcctatct gcgcggactg gggcacaggg ttgaagtttt
     5701 gtttgtcgag gcggaagaaa gcgtgttggt ccgccggttt tccgagacca ggcgaggaca
     5761 tcctctgagc aatcaggata tgaccctgtt ggaaagctta aagaaagaac gggaatggct
     5821 gtttccgctt aaggaaatcg cctactgtat cgacacttcc aagatgaatg cccaacagct
     5881 ccgccatgca gtccggcagt ggctgaaggt cgaacgtacc gggctgctgg taattttgga
     5941 gtccttcggg ttcaaatacg gtgtgccgaa caacgcggat tttatgttcg atatgcgcag
     6001 tctgcccaac ccgtattacg atcccgagtt gaggccttac accggtatgg acaagcccgt
     6061 ttgggattat ttggacggac agccgcttgt gcaggaaatg gttgacgaca tcgaaaggtt
     6121 tgttacgcat tggttaccgc gtttggagga tgaaagcagg agctacgtta ccgtcgccat
     6181 cggttgcacg ggaggacagc accgttcggt ctatattgtc gaaaaactcg cccgaaggtt
     6241 gaaagggcgt tatgaattgc tgatacggca cagacaggcg caaaacctgc cgagccgtta
     6301 atcccattaa acaattatgc cgtctgaaac cccgcttttc tgtttcagac ggcatttcaa
     6361 atattgagaa gaaaggaaag atatggcaat ccaatggttt cccggtcata tgaacaaggc
     6421 gaaaaaagcc atcgccgagc gtgcaaaaag cgttgatatg gtgattgaaa tgctggacgc
     6481 gcgtatgccc gcctccagcg aaaaccccct gcttgcccag ctttccaaag gcaaacccaa
     6541 acttaaaatc ctaaacaaac aagatcttgc cgaccccgaa cgcacaaagg tctggcttga
     6601 ccactacaac agccgccccg acacgcgcgc cattgccctc gattcctccg aaaccggcgc
     6661 acacggcaaa atcacccaag cctgccgcgc gatgattccc caccggcaag gcatagacaa
     6721 acccttgcgc gtcttgattt gcggcattcc caacgtcggc aaatccaccc tcatcaacgg
     6781 catgataggc aaaaaatccg ccaaaaccgg caacgaaccc ggcatcacca aagccgaaca
     6841 acgccttttc cttgccgacg acttctggct gtacgacacc cccggaatgc tgtggccgaa
     6901 aatcattgtc gaagaaagcg gctacaacct cgccgccggc ggttcagtcg gacgcaacgc
     6961 attggacgaa gaagaagtcg ccctcgaact tttagactac ctccgccgcc actacctccc
     7021 tatgttgcaa gaacgctacc aagccgacaa agaccccagc agccactggg acgaaaacgt
     7081 ttggctcgaa tggatagcca aaaaacgcgg cgcagtcctc agcggcggac ggatcaacta
     7141 ccaaaaagcc gccgaaaaca tccttaccga cttccgtgaa ggcaaaatcg gcagaatcac
     7201 cctcgaaacg ccgaaccaat gggaaacttg gctcaaaaaa gcccgtcaga aagaagccga
     7261 actcaaagcc atacgcgaag ccagaaaagc agagcgtaaa gggcagaagc ctgcggacga
     7321 gtagggcggt atagtggaat gccaaaagag gtttcactat cttcaaacag gtcgtctgaa
     7381 acctcagaat aaatttttca gacgacctgt ttgtaaaatt taaaaccaac atatatagtg
     7441 gattaacttt aaaccagtac ggcgttgcct tgccgtacta tctgtactgt ctgcggcttc
     7501 gtcgccttgt cctgatttaa agttaatcca ctataaaact gaaagaaccc ttatccaagg
     7561 ctgtctgaaa aatatttaaa ctattaaatc cggatgttat gactgaaaaa ctccctcctg
     7621 atgcgctgat tgaagccgcg cttttgactc aagccgaacc tttaaacgaa aagaccatgc
     7681 gcgaattgtg tgtgccgccg ttgtcgcaag acaaactgat tgatgtgttg gcgcagttga
     7741 aaacgcgttg gcaggatagg gcgttgcaac tggtgcatac gcaagagggc tggcgttttc
     7801 agattgttca gacggcattc gagcggctgg gcagcctgca agaacagcgt gcgccgcgct
     7861 actcccgcgc cgtgatggaa acactggcga ttatcgccta ccagcagccc gtaacgcgcg
     7921 gcgacatcga gggcatacgc ggcgtggcgg tgtcgcagaa cgtgatgcag accttgcagg
     7981 atcgggggtg gattgaagtc atcggacatc gggacacatt gggaaaaccc gcattgtggg
     8041 caacaacggc aacgtttctc agcgatttgc gcttggacgg tctggaagaa cttccgccgc
     8101 tgaccgaact gggcgaactg gttttacccg atttaatgga aatgccgcct acggatgaag
     8161 aagagccgga agccgtaccg tccgataccc tgcccaactg aaattccaaa tgccgtctga
     8221 aacgcacatt gcttcagacg gcattgcaac aaataagcag ataaaaacaa gtactaagca
     8281 aaattaagga aaacttattt ttaatttaaa aaaatcttag ttataattcg tatatctaaa
     8341 gttgatattg cttttgtcgg tagaattgct aaggaatcct cacaatgctt ctaacacttt
     8401 ctttgcgtga ttttgtcatt gttgaaaatc tgaatctgga ttttcaaagc ggctttaccg
     8461 tattgaccgg agaaaccggc gcgggcaagt ccattacttt ggatgcgatt ggtctgctgt
     8521 tgggcgacaa agccgattac agccaagtcc gcagcggtgc aaaagaagcg cagttgtcgg
     8581 cattgttcga tatttcccat ttgcctgttt taaaagcaga attgtatgaa caggggcttt
     8641 taaacgacgg agaagaagaa ctcagtatcc gccgcattat cgatgccaaa ggcaaaagcc
     8701 gcagctttat caacaatcag gccgctacct tggcgcaact caaatccgtc ggtagccagc
     8761 ttatcgacat ccacgggcaa aacgcccatc attcgcttaa tcaggaagcc gcccagcgcg
     8821 aattgttgga cgcatttgcg ggtagcaggg agcaggcgga aaccgtcagg cagctttatc
     8881 aaaattgggc caatgcgaaa aaagccctcc aagaggcgca ggaacacgcc gatgccgtca
     8941 ttatcgagcg ggagcgtctg gaatggcagt ttaacgaact gaatcagttg gacattaaac
     9001 aaggcgaatg ggaagccctc agccaaagcc acgacagcct tgcccattct gccgagctgt
     9061 tgcaggctgc cgaagaagtc ggaagcaaga ttgacggcga caacggcatc caacgccata
     9121 tctatcaatg tcaaaaacta ttggccaatc tgcaaaacat cgagccgcgc tttgccgaga
     9181 gcctgaatat gttggcaagc atcgaagccg aattgggcga aatcagtgcc aatatgcgcg
     9241 atgtggcagg tcgcagcgac atcaatccca atgaattggc ggcacaggaa cagcgcatgg
     9301 gcgaactgat ggggatggcg cggaaatacc ggatcgagcc tgaagagttg cctgccaagt
     9361 tggcagaaat cgaagaacgc ctgcaaagcc tgcaagctgc cgccgatttg gacgcgctcg
     9421 agcataatgt tgcccacaat tttgccgaat atcaggaagc tgcccacatc ctttctgcca
     9481 tgcgccatca ggcggcagag cgtttgagcg gcgaaacgac cgagcatatg caacaccttg
     9541 ccatgaaagg tgcacgtttc gacatcgtcc tgttgccctc gtcgccgacg gcacatggtt
     9601 tggagcaggt tcaatttcaa gttgccgcca acaaaggcaa tccgccccgt ccgctgaata
     9661 aagttgcctc cggcggcgaa ttggcgcgta tcagccttgc cttacaggtt gttgccagcc
     9721 aatataccca agttcccacc ctgatttttg atgaggtcga taccggtatt ggagggggag
     9781 tggctgaaat ggtcggcaag gcattacgtt cgttgggcag aaaacatcag gtgcttgccg
     9841 ttacccatct tccgcaagtc gcatcctgcg gcgaaaacca ctggcgggtg cgcaagcaca
     9901 gcgagggaga gcaaaccgtc agcgaaatca gtatattgga taaaatccaa cgggtcgaag
     9961 aggttgcccg tatgttgggc ggagaagtca ttaccgatac gacgcggcaa catgcggcag
    10021 aattgctgca acttgcgtcg aaaaatagtt tattttaaaa tcaatcagtt aaaaaataac
    10081 taaaaataaa agtctaaaac aatagacaga actcagataa atccgtatta tcacgctttc
    10141 ttaatcactt gaacaagtga ttgtgctgca cccgtagctc agttggatag agtatctggc
    10201 tacgaaccag agggtcgggc gttcgaatcg ctccgggtgc gccagtaaga aaatacaata
    10261 tgcgcccatc gtctagcggt taggacatcg ccctttcacg gcggtaaccg gggttcgatt
    10321 ccccgtgggc gtgccaattc aaaatgcctc cgattatatc ggaggcattt ctcatttctc
    10381 atttctcatt tctcatttct catttctcat
//
LOCUS       DBBZXU010000065        10379 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.065, whole genome shotgun sequence.
ACCESSION   DBBZXU010000065 DBBZXU010000000
VERSION     DBBZXU010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10379
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.065"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            221..667
                     /gene="yciA"
                     /locus_tag="ACJJDE_001412"
     CDS             221..667
                     /gene="yciA"
                     /locus_tag="ACJJDE_001412"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HGG7541327.1"
                     /translation="MQHEEGNRQRPQGELLLRTVAMPRDTNPNQDIFGGWIMSQMDLG
                     GGILAAEIARGRIVTVAVQEMNFIRPVKVGNVVCCYGHCVRVGNTSLQLKVDVWVKTL
                     MNDCVTEDRYLVTEAVFTYVAIDAEGNPRPIPKEGNPKLAGLLPTP"
     gene            complement(718..1539)
                     /locus_tag="ACJJDE_001413"
     CDS             complement(718..1539)
                     /locus_tag="ACJJDE_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HGG7541328.1"
                     /translation="MAVLITGASAGFGEAMCRAFVGAGYRVIGAARRADRLQALADEL
                     GALFYPLEMDVSRRESVENALNGIPDEFSDIDCLINNAGLALGLDTADKADFEDWETM
                     IQTNVLGLTFLTRKILPQMVERGGGYVMNLGSIAGNYAYAGSNVYGATKAFVRQFSLN
                     LRAELADKNIRVTNIEPGLCGNTEFSNVRFKGDDERAAGVYEGVEFIRPEDIAETALW
                     LYQRPAHMNVNTIEIMPVAQTFAGMKVIKKAVPEVREDFEKQSMSLFSRIRSWFK"
     gene            1809..2267
                     /locus_tag="ACJJDE_001414"
     CDS             1809..2267
                     /locus_tag="ACJJDE_001414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HGG7541329.1"
                     /translation="MNIQTRLAATALALFLSACGNGGAPAQPKGEISENRTAAFKSMM
                     PEFTRMGKMVKDEEPYDVEKFKQAAAAFAESSKKPFTLFESDPQGNGRALPAVWSDGA
                     KFEAEKTKFAAAVEKLNAAAQTGKLDEIKAAYGETGASCKSCHDSFRAPE"
     gene            complement(2431..3546)
                     /gene="lst"
                     /locus_tag="ACJJDE_001415"
     CDS             complement(2431..3546)
                     /gene="lst"
                     /locus_tag="ACJJDE_001415"
                     /EC_number="2.4.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyllactosaminide
                     alpha-2,3-sialyltransferase"
                     /protein_id="HGG7541330.1"
                     /translation="MGLKKACLTVLCLIVFCFGIFYTFDRVNQGERNAVSLLKDKLFN
                     EEGEPVNLIFCYTILQMKVAERIMAQHPGERFYVVLMSENRNEKYDYYFNQIKDKAER
                     AYFFHLPYGLNKSFNFIPTMAELKVKSMLLPKVKRIYLASLEKVSIAAFLSTYPDAEI
                     KTFDDGTINLIQSSSYLGDEFSVNGTIKRNFARMMIGDWSIAKTRNASDEHYTIFKGL
                     KNIMDDGRRKMTYLPLFDASELKAGDETGGTVRILLGSPDKEMKEISEKAAKNFNIQY
                     VAPHPRQTYGLSGVTTLNSPYVIEDYILREIKKNPHTRYEIYTFFSGAALTMKDFPNV
                     HVYALKPASLPEDYWLKPVYALFTQSGIPILTFDDKD"
     gene            3981..6206
                     /locus_tag="ACJJDE_001416"
     CDS             3981..6206
                     /locus_tag="ACJJDE_001416"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HGG7541331.1"
                     /translation="MTQKSTIIYTHTDEAPALATQSLLPIVQAFARHADIDVKTADIS
                     LSGRILAAFPEYLTEAQRVPDALAELGELVKQPDANVIKLPNISASVPQLTAAIKELQ
                     SKGFAVPDYPADPQTDEEKAVRERYDRIKGSAVNPVLREGNSDRRAPKAVKNFAKKNP
                     HSMGAWAKDSKTHVATMQSGDFFHNEQSVTVPEATSVSIVFTDKQGNKKELRAPVALK
                     AGEIIDATVMSKKALLAFLAEQVKDAKAKGVLFSLHMKATMMKVSDPIIFGHAVKVFF
                     APVFEKFGGKLAAAGVNVNNGFGNLLANLDKLDADTRAAVEAEIAAVYAANPDLAMVD
                     SDKGITNLHVPSDVIVDASMPAMIRNSGRMWDKNGKAQDTKAVIPDSSYAGVYQATID
                     FCREHGAFDPTTMGTVPNVGLMAQAAEEYGSHNKTFEIEADGQVQVVDAAGKVLMQHD
                     VEAGDIWRMCQTKDAPVKDWVQLAVNRARLSNTPAVFWLDENRPHDKSLLAKVKAYLA
                     ELDTNGLDIRVLAPEEAAKFSLGRLKNGEDTISVTGNVLRDYLTDLFPILELGTSAKM
                     LSIVPLMNGGGMFETGAGGSAPKHVQQFLEENHLRWDSLGEFLALAVSFEHLAQKTGN
                     TKAQVLADTLDAATEKLLLNDKSPKRKTGELDNRGSHFYLTLYWAQELAAQDKDAELK
                     AAFAPLAKSLAENEAKIVEELSAVQGKAVDIGGYYAANPEKAAQAMRPSATFNQALST
                     L"
     gene            6349..6657
                     /locus_tag="ACJJDE_001417"
     CDS             6349..6657
                     /locus_tag="ACJJDE_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541332.1"
                     /translation="MKTVPTILISILLATALPASAHGIHKSKPLTMDELPPICQQYFK
                     RAETCYNKAGNKANFARNNTKFLFQALPAADLGQRKQMCQIAMDSFAEKTRISNSNAV
                     "
     gene            6647..6799
                     /locus_tag="ACJJDE_001418"
     CDS             6647..6799
                     /locus_tag="ACJJDE_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541333.1"
                     /translation="MPSETMISDGILTSKRTSLIKPAFPASLTRTGLNEVTALTIMAS
                     SHSQKL"
     gene            7278..7409
                     /locus_tag="ACJJDE_001419"
     CDS             7278..7409
                     /locus_tag="ACJJDE_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541334.1"
                     /translation="MQNQNTRPVKIELKGEAGKRVLLAAARRIAKTHQKAVKALADK"
     gene            7406..7774
                     /locus_tag="ACJJDE_001420"
     CDS             7406..7774
                     /locus_tag="ACJJDE_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HGG7541335.1"
                     /translation="MIDGELVALIHQTVLADEAGLKGRADMARLDGALSRIANWRQYE
                     NLEDIYEIAALYAQAIAKAHAFPDGNKRTALLTMLTYLDLQGISIAADQGLDDLIVSL
                     AAGETDFKQLAETLRRLDKE"
     gene            7790..7960
                     /locus_tag="ACJJDE_001421"
     CDS             7790..7960
                     /locus_tag="ACJJDE_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541336.1"
                     /translation="MPSEIQTAFLLKGFSSTALHKGGFFMPSESPSDGIGLHGRSSPA
                     FKQERMSRMPDF"
     gene            8212..8703
                     /locus_tag="ACJJDE_001422"
     CDS             8212..8703
                     /locus_tag="ACJJDE_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4760 domain-containing protein"
                     /protein_id="HGG7541337.1"
                     /translation="MFWQLTVVSVTAVIALGTIFINKKTSKQKATLDVILNDYQDAQF
                     VEADNHISPYIRGTAVDDNNARIDLYEIYQNKGGQWEKERGHLLTVINRHEFYACEIN
                     SGVLDEDLFKRLHCTNFIKLWNAVSPLVMKIREEERKDTIFRELEILVALWKANPLKA
                     SDL"
     gene            9062..9298
                     /locus_tag="ACJJDE_001423"
     CDS             9062..9298
                     /locus_tag="ACJJDE_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HGG7541338.1"
                     /translation="MLRVQKWGNSAAVRLPADMLKQLDFKIGDALVAEVHNGELRVRA
                     ARRFRLADLLAEMEETPPRVEGWEILDDVGNEVV"
     gene            9300..9647
                     /locus_tag="ACJJDE_001424"
     CDS             9300..9647
                     /locus_tag="ACJJDE_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7541339.1"
                     /translation="MYIPDKGDIFHLNFDPSGGKEIKGGRFALALSPKAFNRATGLVF
                     ACPISQGNAAAARSGGMISTLLGAGTETQGNVHCHQLKSLDWQIRKASFKETVPDYVL
                     DDVLARIGAVLFD"
     gene            complement(9700..10209)
                     /locus_tag="ACJJDE_001425"
     CDS             complement(9700..10209)
                     /locus_tag="ACJJDE_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541340.1"
                     /translation="MDILLKYWKPVGVLLLIVLIFTAWHFDRAEKYRMGREAAAAEIS
                     NRLKDGYIEQAKQARSAEQKAAAAFAERQTKLEEEKQNAEKTVAAMRLELNRLRHYAA
                     AQNRSRNLPATTTAATASDGASDSQGWLLFGQCAEKYAGLAETADGHAADLREWQAYG
                     HAVSSQRAE"
BASE COUNT         2813 a         2816 c         2352 g         2398 t
ORIGIN      
        1 ttatcggata aaaacagttg ctcaaacccc tcgttctaga ttcccacttc cgtgggaatg
       61 acggttcagt tgctacggcc ccaccctaca atacgccttg cgaatctgtt ccgcgcccgc
      121 ccttgtatgt ctcaaatggg ttaaactaca cacttcccga cttcccgttt cgggcagggg
      181 tgcaggttcg atttatattt caataaaaca aggaaacttt atgcagcacg aagaaggcaa
      241 ccgccaacgc cctcaaggcg aactgctcct gcgtaccgtc gctatgccgc gcgataccaa
      301 tcccaaccaa gacattttcg gcggctggat tatgtcgcag atggatttgg gcggcggcat
      361 attggcggcg gaaatcgcgc ggggacgcat cgttaccgtc gccgttcagg aaatgaactt
      421 catccgcccg gtcaaggtcg gcaacgtcgt ctgctgctac gggcattgcg tccgcgtggg
      481 caacacttcc ctccagctta aagtcgacgt ctgggtgaaa actttgatga acgattgcgt
      541 taccgaagac cgctacctcg taaccgaagc cgtgttcact tatgttgcca tcgatgcgga
      601 aggcaatccg cgcccgattc cgaaagaagg caaccccaaa ttggcgggct tattgcctac
      661 tccgtaaaaa tacccgtaaa aatgccgtct gaaactgtct tcagacggca ttttgcatca
      721 tttgaaccag gacctgatgc gggaaaacag cgacatactc tgtttttcaa agtcttcccg
      781 cacttcgggc acggcttttt ttatcacttt cattcctgca aaagtctgcg ccacgggcat
      841 aatttcaatc gtgttcacat tcatatgcgc cggccgctgg tacagccaca atgcggtttc
      901 cgcaatatct tcggggcgga taaattccac accctcatac acgcccgccg ccctctcgtc
      961 atcgcctttg aagcgcacat tggaaaactc cgtattgccg cacaaacccg gctcgatatt
     1021 ggtaacgcgg atgttcttat ccgccaactc cgcgcgcaaa ttcaggctga actgccgcac
     1081 aaacgccttg gtcgccccgt aaacgttgct gccggcataa gcataattgc ctgcaatcga
     1141 acccaaattc atcacatagc cgccgccgcg ttccaccatt tgcggcaaaa ttttgcgcgt
     1201 caggaacgtc aaacccaaaa cattggtttg aatcatcgtt tcccaatctt caaaatccgc
     1261 cttgtccgcc gtgtccagac ccaaagccag cccggcattg ttgatgaggc agtcgatgtc
     1321 ggaaaattca tcggggatgc cgtttaaggc gttttccacc gactcgcgtc gcgacacgtc
     1381 catttccaaa gggtaaaaca aagcacccaa ttcatccgcc aaggcctgaa gcctgtccgc
     1441 acggcgcgcc gcaccgataa cgcggtatcc cgccccgaca aacgcgcggc acatcgcttc
     1501 gccgaatcct gccgaagcac cggtaattaa aacagccatt gtttttcctt tctttctcgt
     1561 ttcccaaacc tgtttcaggt atcataacgc tcttcagacg gcatcgcgcc ggctgaaaat
     1621 gacaacaacc ataccaccac gacaggacac attcaatatg tttcaacaca caggacggca
     1681 cataaagcgt cgccctatgt gccgtcctga ttcggaaggg attgcaccct tcccaaataa
     1741 aatctgattc taccgccccg aaggacggat gtccaagtgg gcggggtttc aaccgaaaag
     1801 gaaacacgat gaatattcaa acccgccttg ccgcaaccgc cctcgcccta ttcctttccg
     1861 cctgcggaaa cggcggcgcg cccgcacagc ccaaaggcga aatttccgaa aaccgcaccg
     1921 ccgcgttcaa atccatgatg cccgaattca cacgcatggg caaaatggtc aaagacgaag
     1981 aaccttacga tgtcgaaaaa ttcaaacagg ctgccgcggc gtttgccgaa agcagcaaga
     2041 aaccgttcac actttttgag tccgatccgc aaggcaacgg ccgcgccctg cccgccgttt
     2101 ggtcggatgg tgcaaaattt gaagccgaaa aaacaaaatt cgccgccgcc gtcgaaaaac
     2161 tcaacgccgc agcacaaacc ggcaaactgg atgaaatcaa agccgcctac ggcgaaaccg
     2221 gcgcaagctg caaatcctgc cacgacagtt tccgcgcgcc cgaataacat ccaaaacaaa
     2281 acaatgccgt ctgaagcctt cagacggcat tttctttgcc atttcaccaa gcgcaaagca
     2341 atcaaaaatt atcgttaatt caaaaaatac gccatatcct gatttttgcc ttacttactc
     2401 cgccattttc tatttttatt tgctatgcga ttaatcttta tcgtcaaatg tcaaaatcgg
     2461 gatgccggat tgggtaaaca gggcatacac cggcttgagc caataatctt ccggaaggga
     2521 agccggtttc aatgcgtaaa cgtgcacatt gggaaaatcc ttcatcgtca acgccgcgcc
     2581 gctgaaaaag gtataaattt catacctcgt atgcgggttt ttcttaatct cgcgcaaaat
     2641 atagtcttcg atgacatagg gcgaatttaa tgtggttacg ccggaaagcc cgtaggtttg
     2701 gcgggggtgc ggtgcgacat attgtatgtt gaagtttttt gccgcctttt ccgaaatttc
     2761 cttcatctcc ttgtcgggcg aacccaaaag tatccgcacc gtgccgcccg tttcgtcccc
     2821 cgccttcagt tcggacgcat cgaacagcgg caggtaagtc atcttgcggc ggccgtcgtc
     2881 cataatgttt ttcaaaccct tgaatatcgt gtaatgctcg tcggaagcat tgcgggtttt
     2941 ggcgatgctc caatctccga tcatcatccg ggcaaaattc cgcttgatcg tcccgtttac
     3001 agaaaactca tcgcccaaat agctgctgct ttgaattaaa ttgattgtcc cgtcgtcaaa
     3061 ggttttgatt tccgcatccg ggtaagtgct caaaaaggcg gcaatgctga ctttttccaa
     3121 acttgccaaa taaatccgct tgactttcgg cagcagcatc gactttacct tcagctccgc
     3181 catcgtcgga atgaaattaa acgatttgtt caaaccgtag ggcaggtgga aaaaatacgc
     3241 ccgctccgcc ttatccttta tctgattgaa ataataatcg tatttttcat tcctgttttc
     3301 agacatcagc accacataaa accgctcccc cggatgctgc gccataatcc tttctgccac
     3361 cttcatctgc aatatggtat agcagaaaat cagattgacc ggttccccct cttcattgaa
     3421 gagtttgtcc ttcagcaggg aaaccgcatt cctttccccc tgatttaccc ggtcaaatgt
     3481 ataaaatatc ccgaaacaaa aaacaatcag gcacaacacg gtcaaacaag cctttttcaa
     3541 gcccatatcc ctaaaactcc attccgacaa attgaacata cgccccgagt gtcccgggac
     3601 ggaaaaatgc ggaattttag cagatattcc gacagttacc gaatattata gtgatttaaa
     3661 tttaaatcag gacaaggcga cgaagccgca gacagtacaa gcagtacgac aaggcgaggc
     3721 aacgctgtac tggtttaaat ttaaaccact ataaaatcaa tttcaccgaa aatatgccgc
     3781 cgcacatcag gcacagcacc tccgacaccg ccgccaaaag cgggaaaacc atttccccct
     3841 tcctttcacg tcgccgcgtt caaacacgcc aagatcgaac aaagcgcgaa caaagccgcc
     3901 aaaatatgcc ataatagcca cgcacattcc ccgcgcaatg tgttccaaaa gaaaaaacca
     3961 acctacaaga gaataatcct atgactcaaa aatccaccat tatttatacc cataccgacg
     4021 aagcccccgc gctggcgacc caatcgctgc tgccgattgt gcaggctttt gcccgccacg
     4081 ccgatattga tgtcaaaact gccgacattt ccctgtccgg ccgtattttg gcggcatttc
     4141 ccgaatatct gaccgaagcg cagcgcgtac ctgatgcgct tgccgaattg ggcgaactgg
     4201 tgaaacaacc cgatgcaaac gtaatcaaac tgccgaacat cagcgcatcc gtaccgcaac
     4261 tgactgccgc gattaaagaa ttgcagtcta aaggctttgc cgttcccgac tatcctgccg
     4321 accctcaaac cgatgaagaa aaagccgtac gcgaacgcta cgaccgcatc aaaggcagcg
     4381 cggtaaaccc tgtcctgcgt gaaggcaact ccgaccgccg cgcccccaaa gcagtgaaaa
     4441 actttgccaa aaaaaatccg cacagtatgg gcgcgtgggc gaaagactcc aaaacccacg
     4501 ttgccaccat gcaaagcggc gactttttcc ataacgaaca atccgttacc gtacccgaag
     4561 cgacttccgt atccatcgtg ttcaccgaca aacaaggcaa caaaaaagag ctgcgcgcgc
     4621 ctgttgccct gaaagccggc gaaatcatcg acgcaaccgt gatgagcaaa aaagccctgc
     4681 tcgccttcct tgccgaacaa gtgaaagacg cgaaggcaaa aggcgtattg ttctcactgc
     4741 atatgaaagc cacgatgatg aaagtgtccg acccgattat cttcggacac gccgtcaaag
     4801 tgttcttcgc gcctgtattt gaaaaattcg gcggcaaact ggctgccgca ggtgtcaacg
     4861 tcaacaacgg tttcggcaac ctgcttgcca atctggacaa actggatgcg gacacccgcg
     4921 ccgccgtcga agctgaaatc gccgccgttt acgccgccaa ccctgatttg gcgatggttg
     4981 attccgacaa aggcatcacc aacctgcacg ttcccagcga tgtcatcgtc gacgcttcta
     5041 tgcctgcgat gattcgtaat tccggccgta tgtgggacaa aaacggcaaa gcacaagaca
     5101 ccaaagccgt gattcccgac agcagctatg ccggcgttta ccaagcaacc atcgacttct
     5161 gccgcgaaca cggcgcattt gacccgacaa ccatgggtac tgtgcccaac gtcggactga
     5221 tggcgcaagc ggcggaagaa tacggctcgc acaacaaaac ctttgaaatc gaagccgacg
     5281 gtcaggttca agtagttgat gcggcaggaa aagtcctgat gcagcacgac gttgaagcag
     5341 gcgacatctg gcgtatgtgc caaaccaaag acgctccggt taaagactgg gtacaactcg
     5401 ccgtcaaccg cgcccgcctg agcaatacgc ccgccgtgtt ctggctcgac gaaaaccgtc
     5461 cgcatgacaa gagcctgctc gccaaggtta aagcctacct tgccgaactg gataccaacg
     5521 gcctcgacat ccgcgtcctc gctcccgaag aagccgccaa gttcagcctg ggccgtctga
     5581 aaaacggcga agacaccatc tccgtaaccg gtaatgtctt gcgcgactac ctgaccgact
     5641 tgttcccgat tttggaactc ggcacaagcg cgaaaatgct gtctatcgtt ccattgatga
     5701 acggcggcgg tatgtttgaa accggcgcgg gcggttctgc accgaaacac gtccaacaat
     5761 tccttgaaga aaaccacttg cgttgggact ctttgggcga attcctcgcg ctcgccgtat
     5821 cgtttgaaca tttggcacaa aaaaccggca acaccaaagc ccaagtcctc gccgacactt
     5881 tggatgccgc caccgaaaaa ctgctgctaa acgacaaatc gcccaaacgc aaaaccggcg
     5941 aactcgacaa ccgcggcagc catttctacc tcaccctcta ctgggcgcaa gaattggcgg
     6001 cgcaagacaa agatgccgaa ttgaaagccg catttgcgcc gttagccaaa tcgttggcgg
     6061 aaaacgaagc caaaatcgtt gaagaactct ctgccgtaca aggcaaagcg gtcgacatcg
     6121 gcggctacta cgccgccaat cctgaaaaag cggcacaagc gatgcgccca agcgcaacct
     6181 ttaatcaggc actaagcacc ttataagcac aaaggtaaaa atgccgtctg aacattcgtc
     6241 gttcagacgg cattagttat tcctatctgc ctgattatga ttaaacgccg cacccattgg
     6301 atataaatca tataatcttt agtttttacc ctaggaaaag acaataatat gaaaactgtt
     6361 ccaaccatcc tgattagcat ccttttggca accgcccttc ctgcatccgc acacggtata
     6421 cataagagca agcccctgac tatggacgag ctgccgccga tttgccaaca atatttcaaa
     6481 cgcgccgaaa cctgttacaa caaagccggc aacaaggcaa attttgcacg caacaacact
     6541 aaattcctat tccaagccct gcctgctgcc gatttgggac agcgtaagca aatgtgccaa
     6601 atcgctatgg attcgtttgc agaaaaaacc cgcatcagca atagcaatgc cgtctgaaac
     6661 aatgatttca gacggcattc tcacatcaaa acgcactagc ttgataaaac ccgccttccc
     6721 cgcatccctg acccgaacag gattaaacga agtaacggct ttaaccatta tggcaagttc
     6781 ccattctcaa aaattatagc ggattaaatt taaaccagta cggcgttgcc tcgccttgcc
     6841 gtactatttg tactgtctgc ggcttcgtcg ccttgtcctg atttttgtta atccactata
     6901 ccatataaat taccataaaa ctgtgatcaa agcatctgcc gattgcggtt tattgcaggg
     6961 cgttacggaa aataagcata atccaatgat tcttttatgg taattgtgca gattcgcgcc
     7021 aaaaagaacc gccctgaatc agggcggttt tgttttctgg cggaaacggt gggattcgac
     7081 taaattttat tttattgatt taaatatatt tattctttgt gaaaatttaa tttaccataa
     7141 aaacagccat atacaaaaat cttggagtaa ctattgcatt acactattag aagaatgccg
     7201 tctgaagtgt tttcagacgg catttcccaa gctgccggaa aaaagctaaa atgcccgcaa
     7261 acagacaagg agcagcgatg caaaaccaaa atacacgccc cgtcaaaatc gagcttaaag
     7321 gcgaagcagg caaacgcgta ctgcttgccg ccgcccgccg cattgccaaa acccatcaaa
     7381 aagccgtcaa ggcacttgcc gacaaatgat agacggcgaa ctggtcgcgc ttatccatca
     7441 aaccgtattg gcggatgaag cgggtttgaa agggcgggcg gatatggcgc ggctcgacgg
     7501 cgcattgtcg cggattgcca actggcggca gtatgaaaac cttgaggaca tctacgaaat
     7561 cgccgccctt tatgcacaag ccatagccaa agcccacgcc tttcccgacg gcaacaagcg
     7621 caccgcgctt ttaacaatgt tgacctatct ggatttgcag ggcatcagca ttgccgccga
     7681 ccaagggctt gacgacttga ttgtcagttt ggcggcgggg gaaaccgact tcaaacagct
     7741 cgccgaaacc ctgcgccgac tggataagga ataggcatat ccgacaacaa tgccgtctga
     7801 aattcagacg gcatttttat tgaaaggctt ttcttcaacc gctttacaca aaggcggttt
     7861 ttttatgccg tctgaaagcc cttcagacgg cattggttta cacggcagga gttcccccgc
     7921 ctttaagcag gagaggatgt caaggatgcc tgatttttaa atcacccctt gaaagaacgg
     7981 gcgcacggca ttaatataca gatatcgaca agcaaggtta caaccattaa ggaaatacga
     8041 tgaaatacaa aaatgagggt tttaatggct ggtaaggtgc ggaaacaaat aaaacaagga
     8101 ggttggttgt cagtaattgc cctaacctcc ttgtttgtat ctgtattcac tttattttac
     8161 atattcaggc acagcgtaca gtttaaccta tgagggacgg ccgaatggct gatgttttgg
     8221 caactgaccg ttgtttcagt aaccgccgtc attgcactgg ggacaatatt catcaataag
     8281 aaaacttcaa agcaaaaggc gacattagat gttattttga atgattacca agatgcacaa
     8341 tttgtagaag ccgacaatca tatttcgcct tatattcgcg gcacggcagt tgacgacaac
     8401 aacgcgcgga tcgacctgta tgaaatttat caaaataagg gcggacaatg ggaaaaagag
     8461 agagggcatt tacttaccgt aatcaatcgg cacgagtttt atgcgtgcga aatcaactcg
     8521 ggagtattgg atgaggattt gtttaaacgg ctgcattgca ccaacttcat aaaattgtgg
     8581 aatgcagttt cgcctcttgt tatgaaaata cgcgaagaag aacgcaaaga cacaatattt
     8641 agagagttgg aaattttggt tgcattatgg aaagcaaacc ccctaaaggc atctgatttg
     8701 tgaataaaca gtcaaaactg ttctgaaata tgggcagcca cgcaatcgcc gaaatacgcc
     8761 aaagcagcct tataaagtga ttttttgaac ataattttct ccttgcggag cattttccaa
     8821 tcaaacagtt ttagtttact tggttttgta tccctaaaca accgaaatcc gacatcaagc
     8881 aattagaaag cttttgcatc ttgaaaatgg ataacaaaat attgcctgaa ggcgcaaata
     8941 cagtacaaaa gccgtccgaa acagttcgga cggcttttgg cgtattctgc acaagtattt
     9001 gaacaactga aattttatgg taatatgtat ctactttgta gatacaataa aggtgaagat
     9061 tatgttgcgt gtccaaaaat gggggaactc ggcggccgtc cgactgcctg ccgacatgct
     9121 gaaacaattg gattttaaaa tcggcgacgc tttggtagcg gaagtacata acggcgaact
     9181 ccgtgtgcgt gctgcccgac gtttccgctt ggcagacttg cttgccgaaa tggaagaaac
     9241 cccgccgcgc gtagaaggct gggaaatctt ggatgatgtc ggcaacgagg tcgtctgaaa
     9301 tgtatattcc cgacaaaggc gatattttcc atttgaattt cgacccttcc ggcggcaagg
     9361 aaatcaaggg cgggcggttt gcgctggctc tgtctccaaa agcattcaac cgcgcaacgg
     9421 gattggtttt tgcctgcccc atttcacagg ggaatgcagc ggctgcacga agcggcggca
     9481 tgatttcaac cttactcggt gcaggaacgg aaacgcaggg caatgtccac tgccaccagc
     9541 tcaaatctct ggactggcaa atccgcaagg cttcttttaa agaaactgta cccgattatg
     9601 tattggacga tgtgctggcg cgcatcggcg ccgtcttatt cgattaaatg ctgaaaccgc
     9661 ccgaacctgt aatcttttct tacaggttcg ggcggttgct tattcggcac gctgactgct
     9721 tactgcatga ccatatgcct gccattccct taaatcggct gcatgtccgt cggctgtttc
     9781 tgccagtcct gcatattttt cagcgcactg tccgaataat agccagcctt gggaatctga
     9841 cgcgccatca gatgcggtgg cggcggtagt ggttgcgggc aggtttctgc tgcgattttg
     9901 ggcggcggcg tagtggcgca ggcggttaag ctcaagacgc atagcggcaa cagttttttc
     9961 agcattttgt ttttcctctt ctaatttggt ttgtcgttcg gcaaacgcgg cagcggcctt
    10021 ctgctcggca gaacgcgcct gctttgcctg ctcgatatag ccgtctttca gacgattcga
    10081 aatttcggca gcagcagcct cccgtcccat gcggtatttt tcggcacggt cgaaatgcca
    10141 tgcggtaaaa atcaggacta tcagcagcaa tacgcctacc ggcttccagt atttcaataa
    10201 aatatccatt tcagatgacc tcaaggatgc agcccgggca gatacacggt tttgccgttt
    10261 ttcttggttg cggtcagtat ctggttgcgt tgcgggctgt tgcgtcggaa accgatgtgt
    10321 acccatgcgc cgtccccgcg ctcgggaaat tcgagtatca actggtcgaa tttcagcgc
//
LOCUS       DBBZXU010000066        10346 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.066, whole genome shotgun sequence.
ACCESSION   DBBZXU010000066 DBBZXU010000000
VERSION     DBBZXU010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 10346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10346
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.066"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(109..618)
                     /locus_tag="ACJJDE_001426"
     CDS             complement(109..618)
                     /locus_tag="ACJJDE_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003662333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxyl methyltransferase
                     family protein"
                     /protein_id="HGG7541341.1"
                     /translation="MTMILSILSLFFIIRLLFLAVSIKHEKALIAKGAKQYGKTNSTL
                     LAAVHTLYYLACFVWVWLSDTAFNGISLIGTLTVMASFVILSLIIKQLGEIWTVKIYI
                     LPNHQINRSWLFKTFRHPNYFLNIIPELIGIALLCQAWYVLLIGLPIYLLVLFKRIRQ
                     EEQAMATLF"
     gene            complement(949..1281)
                     /locus_tag="ACJJDE_001427"
     CDS             complement(949..1281)
                     /locus_tag="ACJJDE_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541342.1"
                     /translation="MQILSFQPDIAERMLEGTEGESVNENAQFVRTDNGYWIAWHEGV
                     AALLAPDTPPGIPCFWVEGAESLEELCVMVERGEFDEVEEFDGDDDEWLETAQGCGHH
                     GEACACGH"
     gene            complement(1326..1433)
                     /locus_tag="ACJJDE_001428"
                     /pseudo
     CDS             complement(1326..1433)
                     /locus_tag="ACJJDE_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            1572..2408
                     /gene="cysT"
                     /locus_tag="ACJJDE_001429"
     CDS             1572..2408
                     /gene="cysT"
                     /locus_tag="ACJJDE_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysT"
                     /protein_id="HGG7541343.1"
                     /translation="MLPLKTPGVLPGFKLSLGLTVLCLSLLVVLPFAMMAAKAAEIGW
                     GGFWNTIAEPNVLAAVWLSLRMSFYAMLTNVVFGTLVAWVLVRYEFPGKGLANALVDL
                     PFALPTAVTGIALATLYAPNGWIGRFFEPLGIKIAFTPVGIWIALVVVSLPFIVRAVQ
                     PVLEELSGEYEEAAATLGANRFTTFRRVLLPEITPALLTGAGMMFARATGEYGSVIFI
                     AGNIPMVSEILPLIITGKLEQFDVQGASAVALFMLLVSFVILFALNVMLWALGRRSGA
                     KG"
     gene            2660..3520
                     /gene="cysW"
                     /locus_tag="ACJJDE_001430"
     CDS             2660..3520
                     /gene="cysW"
                     /locus_tag="ACJJDE_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015419 - ABC-type sulfate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter permease subunit CysW"
                     /protein_id="HGG7541344.1"
                     /translation="MKPYSANPNLTEPRRLRVLLIAAALGFLLLMLVVPLVAVFYEAL
                     KGGWDLYLKSLNDPEAWSAIKLTLITALIVVPVNAVLGVAMAWLLTRFDFRGKQLLTT
                     LLDLPFSVSPVVAGLMFVLLFGAHTALGGRLEAQGIQIIFAIPGIVLATLFVTFPFVA
                     REIIPLMQAQGDSEEQAALILGASGWQMFWRVTLPNIKWALLYGIILTNARAMGEFGA
                     VSVVSGHIRGETNTVPLLVEIFYNEYNFTGAFALSGVLALLALATLAVQNIITKLQDK
                     KLAAAERNAV"
     gene            3517..4590
                     /locus_tag="ACJJDE_001431"
     CDS             3517..4590
                     /locus_tag="ACJJDE_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HGG7541345.1"
                     /translation="MSITIQNLNKHFGNFHALKNINLNVPTGKLVSLLGPSGCGKTTL
                     LRIIAGLENADGGKILFDGQDVTAKHVRERKVGFVFQHYALFRHMNVFDNVAFGLTVL
                     PKSERPSKGQIRAKVEELLKLVQLSHLAKSYPHQLSGGQRQRIALARALAVEPKLLLL
                     DEPFGALDAKVRKELRTWLRDIHHNLGVTSILVTHDQEEALEVSDEIVVMNHGKIEQT
                     GSAEAIYRKPENAFVTEFLGETDAFEGRIEKGFWHYNGFAWKLDAQYKWQEQTATGYI
                     RPHEWQIAAEHETPMICAEIEKVHAVGALTHILVKHGKQDVHITLAGSDAARYPIAEG
                     KELKLIPKQVYVFSQNELIEYSI"
     gene            complement(4647..6173)
                     /gene="ilvA"
                     /locus_tag="ACJJDE_001432"
     CDS             complement(4647..6173)
                     /gene="ilvA"
                     /locus_tag="ACJJDE_001432"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004794 - threonine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HGG7541346.1"
                     /translation="MNTPLPYSNYLIRILTASVYDVAVETPLEPARSLSVRLKNNILL
                     KREDLQPVFSFKIRGAYNKMSKLPKDALACGVIAASAGNHAQGVALSAQRLGCRAVIV
                     MPETTPKIKVDAVKSRGGEVVLRGVSYNDAYDYAMELAEKEGLTYIAPFDDPDVIAGQ
                     GTVGMEIVSQHPDPIRAVFVPIGGGGLAAGVAAFIKQVRPEIKVIGVQTNDSCCMKQS
                     VEAGEIVHLKDVGLFSDGTAVKVVGNETFRLCKELLDEIITVDTDAVCGAVKDIFDDT
                     RSITEPAGALALAGLKAYIAREGAENQTLIAVTSGANMNFHRLRHVSERSELGEGNEG
                     IFAVTIPEERGSFLKFVNILGNRNITEFNYRYGDDEKAHIFVGLQAAGPQDLAVIGSR
                     LDEAGLPNVDLTDDEIAKIHIRYMVGGRTDKVENERLVSFEFPERPGALARFLNHMQG
                     GWNITLFHYRNHGADYGRILVGIDVPPHDAAAFDGFLESLGYSYHEETQNAAYKLFLA
                     "
     gene            6321..7490
                     /locus_tag="ACJJDE_001433"
     CDS             6321..7490
                     /locus_tag="ACJJDE_001433"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HGG7541347.1"
                     /translation="MTAHKILPVLLSIILGVSHATAASPAPNKPAVHAAPTFQTPETL
                     TAAHIVIDLQSKQILSAKNINTPVEPAALTQLMTAYLVFKNMKSGNIRSEENLKIPES
                     AWASEGSRMFVRPGDTVSTDKLLKGMIALSANDAALTLVGRLGNGSIENFVQQMNKEA
                     RRLGMKNTVFKNPTGLSREGQVSTAKDLALLSEALMRDFPEYYPLFSIKSFKFKNIEQ
                     NNRNILLYRDNNVNGLKAGHTESGGYNLAVSYSGNGRHILVITLGSESAETRASDNSK
                     LLNRALQAFDTPKIYPKGKTVAQIQISGGSKKTVRAGFLKEAYITLPHKEAKTTEQIL
                     ETIQPIPAPVKKGQILGKIKIRQNGYTLAEKEIVALENVEKRSRWQRLWTRLTGQ"
     gene            complement(7652..10303)
                     /locus_tag="ACJJDE_001434"
     CDS             complement(7652..10303)
                     /locus_tag="ACJJDE_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HGG7541348.1"
                     /translation="MELKFEELPYQLDAVNAVANLFAGQPNHARTFDLTSQGTGRFVG
                     NGLDLDWETLGLNLNTVQKQNGQPETEIGAHGLNFSLEMETGTGKTYVYLRTIYELNR
                     SYGWKKFVIVVPSVPIREGVLKSLEITKAHFDGVFGRPVMRYAEYSSSRLSDLRTFAV
                     NDHIEILVINIQSFEKDGNVINKVNESGETPIKFIQETCPIVIIDEPQNMETEGRLNA
                     LESLNPLFTLRYSATHKQPYHKVYSLNPVQAYNLKLVKQIEVLPVLAENDVNGAFVEL
                     LEVKQAAKGRPKADLNIHYQDKKETKKKKVSVKWEDDLFEKSGGNEAYRHGFIIDGMD
                     FDKQELAFSSGKTITRGGDGDAVRDEIMKNQIRETVREHLAKEKRLNPLGIKVLSLFF
                     IDRVENYRTEDGTAGKFALWFEEIYRELAGNTDTAGVHDGYFSQDRKGRLKNTDGTTQ
                     ADNDTYRLIMRDKETLLSFDSPLRFIFSHSALKEGWDNPNVFQICTLNETRSPLKKRQ
                     EIGRGLRIAVNQEGRRVRDENVNILTVVPNESYELFAANLQKEYEDECGIKFAAENIK
                     NGNKKKKQLFRKDFPLDPEFQAIWDKLKYKTRYRVRFDTEELIKQASEAVANLPEIQK
                     PKIRIRKAQLKQSQTYGIETVEIAGRSREMDVQWEIPDILGEIQRKTGLTRRTVYEII
                     IQSGRLKDVAGNPQRFIDLTAEAVNRSLHALMAAGIEYERTGEVYDQKLLEDMAREGI
                     EFYENGFTFTVSNPQKTICENYIPLDSGTEKAFAQNCEDYDAKNEGGVAFYFKLPGWF
                     KIPTPLGNYNPDWAVVKQVRDKVYFVAETKNTGKGIQTGVDMDKLRQNERLKIKCGKR
                     HFEALGGLAYRVVEKVGDLKSEKEEQA"
BASE COUNT         2508 a         2841 c         2396 g         2601 t
ORIGIN      
        1 tgtaaatctt agagatggcg gaatatagcg gattaacaaa aaccagtacg gcaaggcgag
       61 gcaacgccgt actggttttt gttaatccgc tataattgat gaaacgggtt aaaaaagtgt
      121 tgccatcgcc tgttcttctt gtcggatacg cttaaataag accagcaaat aaatgggcag
      181 gccaatcaat aaaacatacc acgcttgaca taataaggcg atgccaatca gttcgggtat
      241 gatgtttaaa aaataattgg ggtggcggaa tgttttaaac aaccacgaac gattaatttg
      301 atgatttggt aaaatataga ttttaaccgt ccaaatctcc cccaactgct taataatcaa
      361 tgacaatatc acaaacgaag ccatcaccgt cagcgtacca atcaaggata tgccattaaa
      421 agcagtgtca gaaagccata cccaaacaaa acacgccaaa taataaagcg tatgaactgc
      481 cgcaagcagc gtggaattgg tttttccgta ttgtttcgcc cctttggcaa tcaaggcttt
      541 ttcatgttta atagagacgg ctaaaaataa cagtctgatg ataaaaaaca ggcttaaaat
      601 gcttaaaatc attgtcattg atgtttttcc attgaaattg aaataaatat aaatcggatt
      661 aatggtattt ttaattaatg atgtttcaga ccatcatgct ctataaacaa ttcccattaa
      721 gtccgcgccg caacctgcta taataagtct gcaatcggcg caaatcaatg ctttgcgttt
      781 attgccatcc caaaataatt gatgctgcct taattataat accaagataa gtttttttat
      841 tcaataaaat acaaagggaa gcgttcagcc cattgcaaac agatgcaatc caccgattat
      901 ttaaaaaacg gcaaagcctt gcccccttgc ggcaagcctg caatgccttt aatgtccgca
      961 ggcgcaagct tcgccgtggt gcccgcaacc ctgtgccgtt tcgagccatt cgtcgtcatc
     1021 gccgtcaaac tcttccactt cgtcaaactc gccgcgttcc accatgacgc acaactcttc
     1081 aaggctttcc gcgccttcca cccaaaaaca gggaatgccc ggcggcgtat cgggcgcaag
     1141 cagtgccgct acgccttcat gccacgcaat ccaatagccg ttgtccgtac ggacgaattg
     1201 tgcgttttcg ttgaccgact cgccttccgt accttccagc atacgttccg caatgtccgg
     1261 ctgaaaagat aaaatctgca taagtgttcc tttatatgat ggttttccgt caaaacaagg
     1321 cgttatagtg gattaaattt aaaccagtac ggcgttgcct cgccttgccg tactatttgt
     1381 actgtctgcg gcttcgtcgc cttatcctga tttaaattta atccactata ttttaaaaca
     1441 tcgcgcccgc ttgagaaact gccaaccgct ttataacaaa ttcgtctttg taccaaactt
     1501 tccattcttt ccgtttttca gacggcatcg ttaaagtagt ccttcctttt ccttattttc
     1561 agcattgttt tatgttaccg ctcaaaacgc ccggcgtact gcccggcttc aaactcagcc
     1621 tcgggctgac cgtattgtgc ctgtcgctgc ttgtggtctt gccgtttgcg atgatggcgg
     1681 cgaaggcggc ggaaatcggc tggggcggct tttggaacac gattgccgag ccgaacgtgt
     1741 tggcggcggt gtggctgagt ttgcggatgt cgttttatgc gatgctgacc aatgtcgtgt
     1801 tcggcacgct ggtggcgtgg gtattggtgc gctatgaatt tccgggcaag ggtctggcga
     1861 acgcgctggt tgatttgccg tttgcgctgc cgacggcggt tacgggtatc gcgttggcaa
     1921 ccctgtatgc gcccaacggt tggataggcc gttttttcga gcctttgggc atcaaaatcg
     1981 cgtttacgcc cgtcggcatt tggattgcgc tggtcgtcgt cagcctgccc tttatcgtcc
     2041 gcgccgtgca gccggtgttg gaggaattat cgggcgaata tgaggaagcg gcggcgactt
     2101 tgggcgcaaa ccgctttacg acgttccgcc gcgtgctgct gccggaaatc acgccggcac
     2161 tcttgaccgg cgcgggaatg atgttcgcgc gggcaacggg ggaatacggc tcggtgattt
     2221 ttatcgcggg caatattccg atggtttctg aaatcctgcc gctgattatt acgggcaagc
     2281 tggaacagtt cgacgtacag ggcgcgtcgg cggtggcgtt gtttatgctg ctggtttcgt
     2341 ttgtcattct gtttgcgctg aacgtgatgc tgtgggcgtt gggcaggcgt tcgggcgcga
     2401 agggttgagg tcgtctaaaa tacctgttac cgtcattccc gcgcaggcgg gaatccattg
     2461 gtgaatttcg gctgccttat ttattttctg ttttcctgtt gccctgtggt ggattcccgc
     2521 ctgcgcggga atgacggtag ctagacgttt ttattccctt aatcaataaa aggttgtctg
     2581 aaaacgaatc cgctcccaaa aacacagttt ttcagacgac ctccaaacat tttaaaacca
     2641 accagagaac accaccgcca tgaaacccta ttccgccaat cccaacctga ccgaaccgcg
     2701 ccggctgcgc gtgttgctga ttgccgccgc gctgggcttt ctgctgctga tgctggtcgt
     2761 gccgctcgtc gccgtgtttt acgaagcctt aaaaggcggt tgggatttgt acctgaaatc
     2821 cttaaacgat cccgaagcgt ggtctgccat caaattgacg ctgattaccg cgctgattgt
     2881 cgtccccgtc aatgccgtct tgggcgtggc gatggcgtgg ctgctgaccc gttttgattt
     2941 tcgcggcaag cagttgctga ctaccctgct cgatttgccg ttttccgtat cgcccgtggt
     3001 ggccggttta atgttcgtct tattgttcgg cgcgcacacg gcattgggcg gccggctcga
     3061 agcgcaaggc atacagatta tcttcgccat ccccggtatt gttttggcga cgctgttcgt
     3121 taccttcccc tttgtcgcac gcgaaatcat cccgctgatg caggcacagg gcgacagcga
     3181 agaacaggcg gcattgatac tcggcgcaag cggctggcag atgttttggc gcgttaccct
     3241 gcccaacatc aaatgggcgt tactctacgg catcatcctc accaacgccc gcgcgatggg
     3301 cgagttcggc gcggtcagcg tggtatcggg acacatacgc ggcgaaacca acaccgtccc
     3361 gcttttggtc gaaatcttct acaacgaata caacttcacc ggcgcattcg ccctctccgg
     3421 cgtattggca cttttggcac tggcgacgct ggcggtgcag aacatcatca ccaaattaca
     3481 agacaaaaaa ctcgccgccg ccgaaaggaa cgcagtatga gtatcaccat ccaaaactta
     3541 aacaaacact tcggcaattt tcacgcgctg aaaaacatca acctcaacgt ccccaccggc
     3601 aaactcgttt ccctgctcgg cccgtccggc tgcggcaaaa ccacgctttt acgcattatc
     3661 gccggactgg aaaacgccga cggcggcaag attctgtttg atgggcaaga cgtaaccgcc
     3721 aagcacgtgc gcgagcgcaa agtcggcttc gtgttccaac actacgccct tttccgccat
     3781 atgaacgtgt ttgacaacgt tgccttcggt ttgaccgtat tgcccaagtc cgaacgcccg
     3841 tccaaaggac aaatccgcgc caaagtcgaa gaattgctca agctcgtgca gctctcgcat
     3901 ttggcaaaat cctatccgca ccaactctcc ggcgggcaac gccagcgcat cgccctcgcc
     3961 cgtgcgcttg cggtcgaacc gaaactcctg cttttggacg aacccttcgg cgcgttggat
     4021 gccaaagtac gcaaagaatt acgcacctgg ctgcgcgaca tccatcacaa cctgggtgta
     4081 accagcattc tggttacgca cgaccaagaa gaagccctcg aagtttccga cgaaatcgtc
     4141 gtgatgaacc acggcaaaat cgaacaaacc ggcagcgccg aagctattta ccgcaaaccc
     4201 gaaaatgcct tcgttaccga gttcctcggc gaaaccgacg cttttgaagg acgcatcgaa
     4261 aaaggcttct ggcattataa cggcttcgcg tggaaattgg acgcacaata caaatggcag
     4321 gaacaaaccg ccaccggcta tatccgcccg cacgaatggc agatcgccgc cgaacacgaa
     4381 acaccgatga tttgtgccga aatcgaaaaa gtccacgccg tcggggcatt gacgcatatt
     4441 ttggtgaaac acggcaaaca agacgtgcat atcacgctgg ctggcagcga tgccgcgcgt
     4501 tacccaatcg ccgaaggcaa agaattgaag ctgattccga aacaggttta tgtcttctct
     4561 caaaacgaac tgattgaata ttcgatttaa ccatgaaagc gcaatgccgt ctgaaaggct
     4621 ttcagacggc attgtgcttt caagcgtcag gcaagaaaca gcttgtacgc ggcattttgc
     4681 gtttcctcgt gatagctgta tcccagactt tccaagaaac cgtcaaatgc ggcggcatcg
     4741 tgcggcggca catcgatacc gaccaaaatc cgcccgtaat ccgcaccgtg gttgcggtaa
     4801 tggaagagcg taatgttcca accgccctgc atatggttca aaaaacgcgc caacgccccc
     4861 ggacgctccg gaaactcaaa actgaccaga cgctcgtttt ctactttgtc cgtccgccct
     4921 ccgaccatat agcggatatg gattttggca atctcatcat cggtcaggtc gacattgggc
     4981 aatcccgcct catccaaccg gctgccgata accgccaaat cctgcgggcc tgccgcttga
     5041 agtccgacaa agatatgcgc tttttcatcg tccccgtagc ggtagttgaa ctcggtaata
     5101 ttcctatttc ccaatatatt gacaaactta aggaagctgc cgcgttcttc agggatggta
     5161 acggcaaaaa taccttcgtt gccctcgccc aattcgctcc gttccgaaac gtggcgcaaa
     5221 cggtgaaaat tcatattcgc accgctggta acggcaatca gggtttggtt ttccgcgcct
     5281 tctcgggcga tataggcttt cagacccgcc aacgccaacg cgcccgccgg ctcggtaatg
     5341 ctgcgcgtgt catcgaaaat atccttgacc gcgccgcaaa ccgcatcggt atcgactgta
     5401 atgatttcat ccaaaagttc tttgcagagg cggaaggttt cgtttccgac gactttgacc
     5461 gcagtgccgt ctgaaaacag cccgacatct ttcaaatgga cgatttcacc cgcttcgacc
     5521 gactgcttca tacagcagga atcgttggtc tgaacgccga taactttgat ttcggggcgg
     5581 acctgcttga taaatgccgc cacgcccgcc gccaaaccgc caccgcctat cggtacgaat
     5641 acggcgcgga ttggatcggg atgctggctg acaatttcca tccccaccgt cccctgtccc
     5701 gcaatcacat caggatcatc aaacggcgcg atataggtta acccttcttt ttccgccaac
     5761 tccatcgcat aatcgtaggc atcgttgtat gaaacgcccc gcaaaaccac ctcgccgcca
     5821 cggcttttga ccgcatccac tttgattttc ggcgtagtct ccggcatgac gataacggca
     5881 cggcaaccca aacgctgtgc ggacaatgcc acgccttgtg cgtgattgcc cgcgcttgcc
     5941 gcaatcacgc cgcaagcgag cgcatctttc ggcaacttgg acattttgtt gtacgcgccg
     6001 cgtattttga acgaaaaaac cggctgcaaa tcttcgcgtt tcaaaaggat gttgtttttc
     6061 aaacgtacag aaaggctgcg tgccggttcc aaaggcgttt cgaccgcgac atcatagaca
     6121 gatgccgtca ggatgcggat gaggtaattg gaataaggaa ggggcgtgtt cataattcaa
     6181 tatgggataa tcggtttatt aaaatcgcaa aacccaaaac catacgccca agacggcgcg
     6241 aaagcaagaa aaatccgccc gatcagacac cctaagcgta taatcggcag actgaaacac
     6301 gcacacaatt agaatatttc atgacagcac ataaaatcct gcccgtcctg ctttccatca
     6361 tcttaggcgt ttctcacgca acggccgcat cgcccgcgcc caacaaaccg gcggtacacg
     6421 ccgcccccac gttccaaaca cccgaaaccc tcacagcggc acacatcgtt atcgaccttc
     6481 aaagcaaaca gattttatcc gccaaaaaca tcaatacccc tgtcgaaccg gcggcactaa
     6541 cccaactgat gaccgcatat ctggttttca aaaacatgaa atcgggaaat atccgatctg
     6601 aagaaaactt aaaaataccc gaatccgcat gggcttcaga aggaagcaga atgtttgtac
     6661 gtcccggcga tacggtcagc accgacaaac tcttaaaagg catgattgca ctatccgcaa
     6721 acgatgccgc cctaaccctt gtcggccgac tgggcaacgg ctcgattgaa aattttgtgc
     6781 aacaaatgaa caaagaagcc cgacgcttgg gcatgaagaa cactgtattc aaaaacccga
     6841 caggcttgag tagagaagga caggtttcca ccgccaaaga cctcgccctg ctgtctgaag
     6901 cattgatgcg cgactttccg gaatattacc cgctgttttc catcaaatct ttcaaattca
     6961 aaaatataga gcaaaacaac cgcaatatcc ttttatatag ggacaacaat gtaaacggtc
     7021 tgaaagccgg acacacagaa agcggcggct acaaccttgc cgtgtcatac tccggcaacg
     7081 gcaggcacat ccttgtcatc acattgggtt cggaatcggc ggaaacacgc gcatcagaca
     7141 acagcaagct gctgaaccgg gcattgcaag ccttcgatac gcccaaaata tatccgaaag
     7201 gcaaaaccgt tgcccaaatc caaatttccg gaggcagcaa aaaaaccgtc cgcgcaggct
     7261 tcctcaaaga agcctacatc actctgccac ataaggaagc gaaaacaacc gaacaaattt
     7321 tggaaaccat acagccgatt cccgccccgg taaaaaaggg gcagatttta ggaaaaatca
     7381 aaatcagaca aaacggatac acccttgccg aaaaagaaat cgtcgcactg gaaaatgtag
     7441 aaaaaagaag ccggtggcaa aggctttgga cgcgtctgac agggcaatag ccttccatct
     7501 tcccatttcc gaaataagaa aatcaacaga ccgtctgaaa caatcttcag tccccgatcg
     7561 gtttacccaa tcaaagccat taccatatcc gcatcttcgg ttgccgccgc cccaatccaa
     7621 catcgccata ctacgattac acctgtttgt tttaagcctg ctcctctttt tccgacttta
     7681 aatcccccac tttttccaca acacggtatg ccaaaccgcc cagcgcttca aaatgccgct
     7741 tgccgcattt gattttcagc ctctcatttt ggcgcagctt gtccatatcc acgccggtct
     7801 gaatgccttt gccggtgttt ttggtttccg caacgaaata cactttatcc cgaacctgtt
     7861 ttaccaccgc ccaatcggga ttgtaattgc ccagcggggt cgggattttg aaccagccgg
     7921 gcagtttgaa gtaaaacgcc acgcctcctt catttttcgc atcataatcc tcgcaatttt
     7981 gggcaaaggc tttttccgtg ccggaatcca aagggatgta gttttcgcaa atggtttttt
     8041 gcggattgct tactgtgaat gtaaaaccgt tttcgtaaaa ctcgatacct tcgcgcgcca
     8101 tatcttccaa cagcttttgg tcgtacactt cgccggttct ctcatactcg attcctgccg
     8161 ccatcaacgc gtgcaggctg cggtttaccg cttcggcggt aaggtcgatg aagcgttgcg
     8221 gattaccggc tacatctttc agacggcctg actgtatgat gatttcgtac accgtgcgcc
     8281 gcgtcagccc cgtttttctt tgaatctcgc cgagtatgtc cggaatctcc cattgaacgt
     8341 ccatttcgcg gctgcggccg gcaatttcaa ctgtttcgat accgtaggtt tgtgattgtt
     8401 ttaattgcgc cttgcggatg cggattttcg gtttttggat ttccggcagg tttgccaccg
     8461 cttccgaagc ctgtttgatc aattcttccg tatcgaagcg cacgcgatag cgcgttttgt
     8521 atttcaactt gtcccaaatt gcctgaaatt cggggtcgag cgggaaatct ttgcggaata
     8581 actgtttttt cttcttattg ccgtttttga tgttttcggc ggcaaattta ataccgcatt
     8641 cgtcttcgta ttccttttgc agattggcgg caaacaattc gtagctttcg ttcggcacaa
     8701 cggtcagtat gttcacgttt tcatcgcgca cgcgccgtcc ttcctgattg acggcgatac
     8761 gcagcccgcg cccgatttcc tgccgctttt tcagcggcga acgggtttcg ttgagcgtgc
     8821 agatttggaa aacgttgggg ttgtcccagc cttctttcag tgcggaatgg gaaaagataa
     8881 agcgcagcgg gctgtcaaag gaaagcaggg tttccttgtc gcgcataatg aggcggtagg
     8941 tatcgttgtc cgcctgcgtc gtgccgtcgg tgtttttcag acggcctttc ctgtcttgcg
     9001 agaaatagcc gtcgtgtacg cctgccgtat cggtattgcc tgcaagttcc cgatagattt
     9061 cttcaaacca aagggcaaac ttgcctgccg ttccgtcttc tgtacggtaa ttctccacac
     9121 ggtcgatgaa gaacagagac aacaccttaa tccccagcgg attcagccgt ttctccttcg
     9181 ccaaatgctc ccttaccgtt tcgcggattt ggtttttcat aatttcatcg cgcaccgcat
     9241 cgccgtctcc gccgcgcgta atggttttac cgcttgagaa cgccaattcc tgcttatcga
     9301 aatccatgcc gtcgataatg aaaccgtggc ggtaggcttc gttaccgccc gatttttcaa
     9361 acaaatcgtc ttcccatttg acggatacct ttttcttctt ggtttccttt ttatcctgat
     9421 aatgaatgtt caaatcggct ttcggacggc ctttggccgc ctgctttact tccagcagct
     9481 ccacaaatgc gccgttcaca tcgttttccg ccaataccgg caaaacttcg atttgcttta
     9541 ccagctttaa attgtatgcc tgcacgggat tcaggctgta aaccttgtgg tacggttgtt
     9601 tatgcgttgc cgaatagcgc agggtaaaga gcggattgag cgattccaaa gcgttcagac
     9661 ggccttccgt ttccatattc tgcggctcgt cgataataac gataggacac gtttcctgaa
     9721 taaacttaat cggcgtttcc ccgctttcgt ttaccttatt gataacgttt ccatcttttt
     9781 caaacgactg gatattgatc accaaaatct cgatgtggtc gtttaccgca aaagtgcgca
     9841 agtccgatag ccggctgctt gaatattccg cataacgcat cacgggcctg ccgaacactc
     9901 cgtcaaaatg cgccttcgta atttccaggc ttttcaacac gccttcgcgt atcggtacgc
     9961 tcggtacgac aataacaaat ttcttccagc cgtaactgcg gtttaattcg taaatcgtgc
    10021 gcagatagac ataggttttg cccgtacccg tttccatttc tagagaaaaa ttcagcccgt
    10081 gcgcgccgat ttccgtttca ggctgtccat tttgcttttg caccgtgttc agattcaggc
    10141 ctagcgtttc ccaatccaaa tccaagccgt tgccgacaaa ccgccccgtc ccctgactgg
    10201 tcaaatcgaa tgtccgggca tggttcggct gccctgcaaa aagattcgca acggcattta
    10261 ccgcatcaag ctgatagggc agttcttcaa atttcagttc catttttatt tccttctatc
    10321 cgctgtcgcg cggaaaatct acctct
//
LOCUS       DBBZXU010000067         9872 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.067, whole genome shotgun sequence.
ACCESSION   DBBZXU010000067 DBBZXU010000000
VERSION     DBBZXU010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9872)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9872)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9872
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.067"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(311..544)
                     /locus_tag="ACJJDE_001435"
     CDS             complement(311..544)
                     /locus_tag="ACJJDE_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HGG7541349.1"
                     /translation="MKLTLMFREYCSLCHKMRDELKPFQDEYGFGLEVVDVDENPVLE
                     EKYNELVPVLLAGDEEICHWFLDEDRLKQFLER"
     gene            complement(710..910)
                     /locus_tag="ACJJDE_001436"
     CDS             complement(710..910)
                     /locus_tag="ACJJDE_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HGG7541350.1"
                     /translation="MFVCICNAVTDHQIKETIAAGATTMGDLQSQLGVASCCGCCGEL
                     AASFLTAHNAQPTVTAGINVQA"
     gene            complement(1082..1957)
                     /gene="xerD"
                     /locus_tag="ACJJDE_001437"
     CDS             complement(1082..1957)
                     /gene="xerD"
                     /locus_tag="ACJJDE_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009009 - site-specific recombinase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HGG7541351.1"
                     /translation="MEEGLIDRLLETLWLDRRLSQNTLNGYRRDLEKIARRLSQSGRM
                     LKDADEADLAAAVYVDGEQRSSQARALSACKRLYIWMEREGIRTDNPTRLLKPPKIDK
                     NIPTLITEQQISRLLATPDTDTPHGLRDKALLELMYATGLRVSEAVGLNFGNVDLDRG
                     CITALGKGDKQRMVPMGQESAYWVERYYTEARPLLLKGRNCDALFVSQKKTGISRQLA
                     WMIVKEYASQAGIGHISPHSLRHAFATHLVQHGLDLRVVQDMLGHADLNTTQIYTHVA
                     NVWLQGVVKEHHSRN"
     gene            complement(2009..2449)
                     /locus_tag="ACJJDE_001438"
     CDS             complement(2009..2449)
                     /locus_tag="ACJJDE_001438"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HGG7541352.1"
                     /translation="MDVKYEFTLPSSSGADFHSAEHLPLVVYFYPKDSTPGCTTEGLD
                     FNARLEQFEALGYTVVGISRDGVKAHQNFCAKQGFRFELLSDKDETVCRLFDVIKLKK
                     LYGKESLGIERSTFVLNKDGEIAHEWRKVKVAGHAQEVLETLSR"
     gene            2873..3811
                     /locus_tag="ACJJDE_001439"
     CDS             2873..3811
                     /locus_tag="ACJJDE_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HGG7541353.1"
                     /translation="MSIHTLKRLPSSLLLGLCLSLPSAHLFADNDILGQFLEQNMLTS
                     SDPIEIFAESTIHPTNTQAITGGLILSSQSALVVNNKTGQILYQKNADRIMPIASISK
                     LMSAMVVLDANLDMNETVTITPDEIDRIKGTGSRLAIGTALTRKELLHLSLMSSENRA
                     THALGRTYPGGMGAFVAAMNRKAQSLGMYGSRFYEPTGLNFQNVSTAKDLSLMVNAAA
                     QYPQIRTNSTSNYASVQTKNGQQNYKNSNALVREGMWNIELQKTGYIREAGRSMVVKA
                     NIQNQPVTIVLLNSPTSATRVNDARKIESWMLQQRS"
     gene            3940..4233
                     /gene="hfq"
                     /locus_tag="ACJJDE_001440"
     CDS             3940..4233
                     /gene="hfq"
                     /locus_tag="ACJJDE_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HGG7541354.1"
                     /translation="MTAKGQMLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYV
                     VLLRNTSVTQMVYKHAISTIVPARSVNLQHENRPQAAPASTLVQVETVQQPAE"
     gene            4317..4883
                     /locus_tag="ACJJDE_001441"
     CDS             4317..4883
                     /locus_tag="ACJJDE_001441"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HGG7541355.1"
                     /translation="MLLKNILPFAHCLLRQALPEGGNALDGTAGNGHDTLFLAQTAGI
                     RGKVWAFDIQPQALNNTRCRLQEAGYSNVRFILDGHENLKQYIPKPLDAAIFNFGWLP
                     GGDKSLTTRTETSIAALSATLSLLKENGMLIAVLYPGHENGKQEAEAVGQWAKNLPQE
                     QFAVLRYGFTNRKNSPPYLLAFEKLRQK"
     gene            4937..5311
                     /locus_tag="ACJJDE_001442"
     CDS             4937..5311
                     /locus_tag="ACJJDE_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB2 family protein"
                     /protein_id="HGG7541356.1"
                     /translation="MQYLFVKYSHQIFVTITILVFNIRFFLLWKNPEKPLAGFWKALP
                     HLNDTMLLFTGLWLMKITHFSPFNAPWLGTKILLLLAYIALGMMMMRARPRSTKFYTV
                     YLLAMCCVACIVYLAKTKVLPF"
     gene            5321..5815
                     /gene="folK"
                     /locus_tag="ACJJDE_001443"
     CDS             5321..5815
                     /gene="folK"
                     /locus_tag="ACJJDE_001443"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HGG7541357.1"
                     /translation="MNNRHFAVIALGSNLENPAQQVRAALDTLSSHPDIRLKQASSLY
                     MTAPVGYDNQPDFVNAVCTVSTTLDGIALLAELNRIEADFGRERSFRNAPRTLDLDII
                     DFDGISSDDTRLTLPHPRAHERSFVIRPLAEILPDFVLGKHGKVAELSKRLGNQGIRL
                     LPDR"
     gene            complement(5943..6422)
                     /locus_tag="ACJJDE_001444"
     CDS             complement(5943..6422)
                     /locus_tag="ACJJDE_001444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HGG7541358.1"
                     /translation="MPESIFKQISLDILKLHRDSVYSLLATSGCNCQVHEAAYVNIDG
                     KYYIALSCEPEVGEVKTGILLIEDESRNLRLSWVGSARELDRKDSVYKRALSALSRKL
                     GRCKDRLHTAVQPFLLELVPEKGRFSVGDEEVWISRNDLVRALYPVGYSMRQAVLQI"
     gene            complement(6642..7379)
                     /gene="ubiE"
                     /locus_tag="ACJJDE_001445"
     CDS             complement(6642..7379)
                     /gene="ubiE"
                     /locus_tag="ACJJDE_001445"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HGG7541359.1"
                     /translation="MGGQKTHFGFSTVNEDEKAGKVAEVFHSVAKNYDIMNDVMSAGL
                     HRVWKHFTINTAHLKKGDKVLDIAGGTGDLSRGWAKRVGKEGEVWLTDINSSMLTVGR
                     DRLLNEGMILPVSLADAEKLPFPDNYFNLVSVAFGLRNMTHKDAALKEMYRVLKPGGT
                     LLVLEFSKIYKPLEGAYDFYSFKLLPVMGKLIAKDAESYQYLAESIRMHPDQETLKQM
                     MLDAGFDSVDYHNMSAGIVALHKGVKF"
     gene            complement(7422..7790)
                     /locus_tag="ACJJDE_001446"
     CDS             complement(7422..7790)
                     /locus_tag="ACJJDE_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF971 domain-containing protein"
                     /protein_id="HGG7541360.1"
                     /translation="MNNIPVEIRLLKNRTVLVLTYGDEPKNLPAEFLRVYSPSAEVRG
                     HGVGQDVLQTGKADVQIADLQPVGQYALKISFSDGHDSGLYDWAYLHRLAYGYDAMWQ
                     EYLDKLAAAGASRFEKQSDC"
     gene            7910..9529
                     /gene="mnmC"
                     /locus_tag="ACJJDE_001447"
     CDS             7910..9529
                     /gene="mnmC"
                     /locus_tag="ACJJDE_001447"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016645 - oxidoreductase activity, acting
                     on the CH-NH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HGG7541361.1"
                     /translation="MDNLVWDGVPDIRTLDQTIRKHAHPLNLIVCLPDNQIPDFQTAQ
                     DASDAECRLKHRLDQATQCLQFDSINLIEHILPDVRFWLVPPSRTRRLHEHFHHISWQ
                     TEAIPQTESKPDKPWFALPQTSERQKPEHILVIGAGISGAATAHALASHGISVTVLEA
                     RKAAQAASGNRQGLLYAKISPHDTEQTELLLAGYGYTKRLLGHILPESETWGGNGIIH
                     LNYSRTEQQRNHELGLQKHHNHLYRSITQAEAEKIAGIPLNTPYAEPLCGLFWQHGVW
                     LNLPAFVRALLRHPLIGLHEDTPLTGISHDGEKWIASTPNGIFSATHIVYCTGAHSPC
                     LPEINLAALPLRQIRGQTGLTPSTPFSEQLRCAVSGESYISPSWHGLHCYGASFIPNS
                     SHTGWNEAEEASNRQALAHLNPALAESLFAANPNPQKYQGHAAIRCDSPDHLPLVGAL
                     GDIAAMRQTYTKLALDKNYRIDTPCPYLPNAYVNTAHGTRGLATAPICAAAVAAEILG
                     LPHPLSKRLRHALHPNRTIIRAIVRRKDLTP"
     gene            complement(9643..9760)
                     /locus_tag="ACJJDE_001448"
                     /pseudo
     CDS             complement(9643..9760)
                     /locus_tag="ACJJDE_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain protein"
BASE COUNT         2638 a         3001 c         1999 g         2234 t
ORIGIN      
        1 taccgattac acaaacacat atcatcttta cacaatcatg cttccatcaa cagtaaaaca
       61 tgatatgatt gccaacaata acatctcaca ataaattttc taatttttat tgaaaaaatc
      121 aataaataag aattctccca accgacaaat aaaataaaga aagggtcaat atgcaacacc
      181 gtagaagatt gacaatttac caggcatcca aacgtgcttc ctttactggc aggtcatccg
      241 ccccgcaaaa acgtaaagaa cgttgatttg aaaaaaatgc cgtctgaagt cctgcttcag
      301 acggcatttt ttaccgttcg agaaactgtt tcaacctgtc ctcatccaaa aaccagtggc
      361 agatttcctc atctcccgcc aacaaaacgg gaaccagttc attgtatttt tcttccaaaa
      421 caggattttc atccacatcg accacttcca gcccgaaccc gtattcatcc tgaaaaggtt
      481 tgagttcgtc gcgcattttg tggcacaagc tgcaatattc acgaaacatc aaggtcaatt
      541 tcatccgcgt ttccttatct gtcaatttgc acacgccaaa gccttagacg cagcagaatc
      601 atggtctatt tgggaaaaaa caatgttttc aaggaagatg atactcaagt cctgccaaaa
      661 acagcaaaaa tgccgtctga acagttcaga cggcatttcc aaaaccgttt tacgcttgaa
      721 cgttgatacc cgccgtaacc gtcggttgcg cattgtgcgc cgtcagaaac gaagcggcaa
      781 gctccccgca gcagccgcag cagctcgcta cgcccaattg cgactgcaaa tcgcccattg
      841 tggtcgcgcc ggcggcgatg gtttccttga tttgatggtc ggtaacggca ttgcagatgc
      901 agacaaacat tttgtgctcc gtgtgttctc aaactatcgt accgatagcg gcttttatta
      961 tcgtatgcaa atataaataa aaacggttcg cattgcaagg tcggcataca cggtttgtct
     1021 tggtaatttt ttatcaagtt ttcatttccg attgatttct tattaaaccg aagcagaagc
     1081 ctcagtttcg ggaatggtgt tccttcacta caccctgcaa ccatacattg gcaacatggg
     1141 tgtaaatctg cgtcgtattc aaatcggcat gtcccaacat atcctgaacc acgcgcaaat
     1201 ccaatccgtg ctgcaccaag tgcgtggcaa aggcgtggcg caggctgtgc gggctgatgt
     1261 gcccgatgcc tgcctgactt gcatattctt tgacaatcat ccatgccaac tgacgagaaa
     1321 tgcccgtctt tttctgactg acaaacaatg cgtcgcaatt cctgcctttc agcagaagtg
     1381 ggcgtgcctc cgtataatag cgttccaccc aatacgccga ctcctgcccc atcgggacca
     1441 tcctctgctt atcgcccttg cccagcgcgg taatacagcc cctgtccaaa tccacattgc
     1501 cgaagttcag cccgaccgcc tcgctgacgc gcaagccggt cgcgtacatc aattcgagca
     1561 gtgccttgtc ccgcaaaccg tgtggcgtat cagtatccgg agtggcaagc agccgggaaa
     1621 tctgctgttc tgtaatcagt gtcggaatat tcttgtcgat tttgggcggt ttcagcaaac
     1681 gggtgggatt gtccgtcctt atgccttcac gctccatcca tatatacagg cgtttgcacg
     1741 ccgataatgc gcgcgcctgc gaactccgtt gctctccgtc aacataaacc gccgccgcca
     1801 aatccgcttc gtccgcatcc ttcagcattc tgcccgattg ggacaggcgg cgggcgattt
     1861 tttccaaatc gcgccggtaa ccgtttaaag tattctgact gagccgcctg tccaaccaca
     1921 gcgtttcaag cagcctgtcg atcaaacctt cttccatacc gttccaaaca aatgccgtct
     1981 gaatcttctt cagacggcat ggttcacatt atcgggaaag cgtttccaac acttcctgtg
     2041 catgacccgc cactttgact ttccgccatt catgggcgat ttctccatcc ttattcaaga
     2101 cgaacgtact gcgctcgata cctaacgact ctttcccgta cagtttcttc aatttgatga
     2161 catcaaacag gcggcacact gtttcatcct tgtcgctcaa cagctcgaac cggaaaccct
     2221 gcttggcgca aaaattctga tgcgccttta cgccgtcgcg ggaaataccg accacggtat
     2281 aacccaatgc ctcaaactgt tccaaacgcg cattgaaatc caagccttcc gtcgtacagc
     2341 ccggcgtact gtctttcgga taaaaataca cgaccaaagg cagatgttct gccgaatgaa
     2401 aatccgcacc gctgctcgaa ggcagggtaa attcatattt cacatccata gtcctactcc
     2461 cgatattccc attattcaaa acggcacgca gacgcaccgc cgcaattgcc aaaccaaccc
     2521 cgattctacc gccccaaagg acaaggattc aaccgccgga aacatccaaa ccgacacacg
     2581 acggcatgaa aaatatccat gtcaaaccac aaaatatagt ggattaacaa aaatcaggac
     2641 aaggcgacga agccgcagac agtacaaata gtacggcaag gcgaggcaac gccgtactgg
     2701 tttttgttaa tccactatat gttccgattt aaaaacagaa tgttataaaa cccaatcccc
     2761 aaaacacaac aagaccgccc gcctacgggc agtctcctgt cagacgacat actttacaga
     2821 tggctgtttt ttcaacaaaa taacgccaat actcaaaaat atggaatcaa aaatgtccat
     2881 ccatactctg aaacgcctgc cctcatcgct gctgctcggt ctctgccttt ccctgccgtc
     2941 agcccacctt tttgccgaca acgacatttt agggcaattt ttagaacaga acatgcttac
     3001 ctcctccgat ccgatagaaa tattcgccga aagcacgata caccccacca acacccaagc
     3061 cattacaggc ggtctgattc tctcctcaca gtctgccctg gtcgtcaaca acaaaaccgg
     3121 acagatactg tatcagaaaa acgccgacag gattatgccc atcgcctcca tttccaaact
     3181 gatgagcgcg atggtcgttt tggatgcaaa cttggacatg aacgaaaccg ttaccattac
     3241 gcccgacgaa atcgaccgca tcaaagggac cggcagccgt cttgccatag gtacggcact
     3301 tacacgcaaa gaactgctgc acctgagcct gatgagcagc gaaaaccgcg ccacccatgc
     3361 attgggcaga acctaccccg gcggcatggg cgcatttgtc gccgccatga accgcaaagc
     3421 ccaaagcctc ggtatgtacg gcagccgctt ttacgaaccg accggactca acttccaaaa
     3481 cgtttctacc gccaaagacc tgagccttat ggtcaacgcc gccgcccaat atccgcaaat
     3541 ccgcaccaac tcgacttcca actacgcctc ggtacagacc aaaaacgggc agcagaacta
     3601 caaaaactcc aatgccctgg tcagagaagg catgtggaac atcgaattgc agaaaaccgg
     3661 ctacatacgc gaagcaggca ggtctatggt tgtcaaagcc aacattcaaa atcaacccgt
     3721 taccatcgta ttgctgaact cgcccacatc cgccacacgc gtcaacgacg cccgcaaaat
     3781 cgaatcgtgg atgctgcagc aacgctcctg acatacaaat gcccggcgga aaaccgccca
     3841 aacacaaaaa aaattggtaa tttttcctat tcaaggctac aattcgacac gcacagggcg
     3901 tctgcccgat ttcacaatca taataacgga gttaaaaata tgacagctaa aggacaaatg
     3961 ttgcaagatc ccttcctgaa cgccctgcgt aaagagcacg ttccggtttc gatttacctg
     4021 gtcaacggca tcaaactgca aggtcaggtt gaatctttcg accaatacgt cgttcttctg
     4081 agaaacactt ccgtaaccca aatggtttac aaacacgcca tttccaccat cgtaccggct
     4141 cgctccgtca acctccaaca cgaaaacaga ccccaagccg caccggcttc gacccttgtc
     4201 caagtggaaa ccgtccagca gcctgccgaa taatccgcgc gaagcatgac gtgtcatatc
     4261 tttcaatacc ttaccgacat cggtaaggta tttttatttt cagacagcat ttaaaaatgt
     4321 tattgaaaaa catccttcca ttcgcccatt gccttttgcg gcaggcactt cccgaaggcg
     4381 gcaatgcgct ggacggcacc gccggcaacg gacacgacac ccttttcctc gcacaaaccg
     4441 caggcatccg ggggaaagtg tgggcattcg acatccagcc gcaagccctg aacaacaccc
     4501 gatgccgtct gcaggaagca ggttacagca atgtacggtt catcttggac ggacatgaaa
     4561 acctgaagca atatattcca aagccgctgg atgcagccat tttcaatttc ggctggctgc
     4621 ccggcgggga caaaagcctt accacccgca cggaaaccag cattgccgcc ctttctgcca
     4681 ccttatccct actgaaagaa aacggtatgc ttattgccgt cctctatccg ggacacgaaa
     4741 acggcaaaca ggaggcagaa gccgtcggac aatgggcaaa aaacctgcct caagaacagt
     4801 ttgccgtttt acgttacggc tttaccaacc ggaaaaacag cccaccctat ctgttggcat
     4861 ttgaaaaact gcgtcaaaaa taactgtttg cggtaaaata agccgattcc aacccttatt
     4921 ttgataagag ccgaccatgc agtatctgtt tgtcaaatac agccaccaaa tcttcgttac
     4981 catcaccatt ttggtattca acatccgttt tttcctactt tggaaaaatc cagaaaagcc
     5041 cttggcgggc ttttggaagg cactgccaca ccttaacgac accatgctgc tgtttacggg
     5101 attgtggctg atgaaaatta cccatttctc cccgttcaac gcgccttggc tcggtacaaa
     5161 aatcctgctt ctgctcgcct atatcgcatt gggtatgatg atgatgcgcg cccgtccgcg
     5221 ttcgaccaag ttctacaccg tttacctgct cgccatgtgt tgcgtcgcct gcatcgttta
     5281 ccttgccaaa accaaagtcc tgcctttctg aaacaccgtt atgaacaaca gacattttgc
     5341 cgtcatcgcc ctgggcagta atcttgaaaa ccctgcccaa caggtacgcg ccgcattgga
     5401 cacgctgtcg tcccatcctg acatccgtct taaacaggct tcctcactgt atatgaccgc
     5461 gcccgtcggt tacgacaatc agcccgattt tgtcaatgcc gtctgcaccg tttccaccac
     5521 tctggacggc attgccctgc ttgccgaact caaccgtatc gaggctgatt tcggacgcga
     5581 acgcagcttc cgcaacgcgc cgcgcacatt ggatttggac attatcgact ttgacggcat
     5641 ctccagcgac gacacccgac tcaccctgcc gcatccgcgc gcgcacgaac gcagtttcgt
     5701 catccgccct ttggcagaaa tcctccctga ttttgtttta ggaaaacacg gaaaggttgc
     5761 cgaattgtca aaacggctgg gcaatcaagg tatccgtctt ttacccgaca ggtaattccg
     5821 cacgcggatg ccgtctgaat gccggtttca gacggcattt ttaccctgcc gccaatctgt
     5881 acgcaaaaaa aatcgcccct tgaaaaaggg gcgcaaaagg aacacaaacc actaccaaaa
     5941 ctttaaatct gcaacactgc ctgccgcata ctgtatccga caggatataa agccctcact
     6001 aaatcgtttc gagaaatcca aacttcttca tcgccgacag aaaatctgcc tttctccggc
     6061 accagctcca acaaaaacgg ttgaaccgcc gtatgcagcc tgtccttaca ccgccccagc
     6121 tttctggaca acgcggacaa ggcacgctta tagacactat ccttgcggtc aagttcccgc
     6181 gcactgccga cccagctcaa acgaaggttg cggctttcat cctcaatcag caaaatgcct
     6241 gttttgactt cccccacctc gggctcacat gaaagcgcaa tataatattt gccgtcgatg
     6301 ttgacatacg ccgcttcatg cacctgacag ttgcagccgg aagtggcaag cagcgaataa
     6361 acagagtccc gatgcagttt caaaatatca agggaaatct gtttgaaaat actttccggc
     6421 atttttccct cctttcgtct gctgcgttgt ttactggatt gactgcatta tacagacatc
     6481 tcccaatctt gcaaatgata attgttccta ttttttaaaa aatttataaa ttattgatgg
     6541 atatgtgaat taattttaag atttaaaatc tctttctcaa aaaaacacaa aaatgccgtc
     6601 tgaaacgtgt tcagacggca ttggctgcac agccagtccg tttaaaattt cacgccctta
     6661 tgcagcgcga cgatgcccgc actcatattg tgataatcca cgctgtcaaa gcccgcatcc
     6721 agcatcatct gtttcaaagt ttcctgatcg gggtgcatac ggatggattc ggcgagatat
     6781 tgataactct ccgcatcttt ggcaatcagt ttgcccatga ccggcagcag cttgaacgaa
     6841 tagaaatcat acgcgccttc caaaggtttg tagattttgg aaaactccaa taccagcaat
     6901 gtcccgccgg gtttcaaaac acggtacatc tctttcagcg cggcatcttt atgcgtcata
     6961 ttccgcaaac cgaacgccac ggaaaccaag ttgaaataat tgtcagggaa aggcagtttt
     7021 tccgcatcgg caagcgacac gggcaaaatc atgccttcgt tcaaaagacg gtcgcgcccg
     7081 acggtcagca tagaggaatt aatatcggtc agccaaacct cgccttcctt gccgacccgt
     7141 ttcgcccaac cgcgcgacaa atcgcccgta ccgccggcaa tgtccaacac tttatcgcct
     7201 tttttcaggt gcgccgtgtt gatggtgaaa tgcttccaca ccctgtgcag ccctgccgac
     7261 atcacatcgt tcataatgtc gtagtttttg gcgacggagt ggaacacttc cgccactttt
     7321 ccggctttct catcttcgtt gaccgtactg aatccgaaat gcgttttctg tccgcccata
     7381 ttctaaccac ctccctgatg ccgccctacg gcatcccaaa cttaacaatc tgattgcttt
     7441 tcaaaacggg aagcacccgc cgccgccaat ttgtccaaat attcctgcca catcgcatcg
     7501 tatccgtatg ccagtctgtg cagatacgcc caatcgtaaa gaccgctgtc gtgcccgtct
     7561 gaaaaactga ttttcagcgc gtactgtccg acaggctgca aatccgcgat ttggacatcc
     7621 gccttgccgg tctgcaaaac atcctgtccc acgccgtgtc cgcgcacttc cgcactcggc
     7681 gaatagacgc gtaaaaattc ggcaggcaga tttttaggtt cgtccccata agtcaaaacc
     7741 aacacggtac ggtttttcaa caaacggatt tcaacaggaa tattattcaa aaaacacctc
     7801 ggttcggcat acaatatccg gcaggcgcag gcgtgccttc aaacggcgcg tattttaaca
     7861 gctttatccc gataccgata ttcaaaccca cactttaaac ggcattgata tggacaatct
     7921 cgtatgggac ggcgttcccg acatccgcac actcgaccaa accatccgca aacacgcaca
     7981 cccgctcaac ctgattgtct gcctccccga taatcagatt cccgattttc aaaccgcaca
     8041 agatgcttcg gacgcggaat gccgtctgaa gcaccgtttg gatcaggcaa cgcagtgcct
     8101 ccagttcgac agcatcaacc tcatcgaaca catcctgccc gatgtccgct tctggctggt
     8161 tcccccttca cgcacccgcc gcctgcacga acacttccac cacatttcct ggcagaccga
     8221 agccatcccg caaaccgaaa gcaaacccga caaaccctgg tttgcacttc cacaaacatc
     8281 cgaacggcaa aaaccggaac acatcctcgt tatcggcgcg ggcatatccg gcgcggcaac
     8341 cgcccacgcc ttagcatcac acggcatttc cgttaccgta ttggaagccc gaaaagccgc
     8401 ccaagccgcc agcggcaacc gccaagggct gctctacgcc aaaatctcgc cgcacgacac
     8461 cgaacaaacc gaactgctgc ttgccggcta cggctacacc aaacgcctgc tcggacacat
     8521 cctgcccgaa tccgaaacct ggggcggcaa cggcatcatc cacctcaatt acagccgcac
     8581 cgaacaacaa cgcaatcacg aattgggttt gcaaaaacac cataaccacc tctaccgcag
     8641 catcacgcag gcagaagccg aaaaaatcgc cggtatcccg ctgaacacgc cctacgccga
     8701 accattatgc ggactgtttt ggcagcacgg cgtatggctc aatctacccg cattcgtccg
     8761 cgccctcctc cgccatccgc tgattggact acacgaagac acaccgttaa ccggtatttc
     8821 ccacgacgga gaaaagtgga ttgcaagcac gccaaacggc atcttttctg ccacacacat
     8881 cgtctactgc accggcgcgc acagcccctg cctgcccgaa atcaacctcg ccgccctgcc
     8941 cctcaggcaa atacgcggac aaaccggcct cacaccgtcc accccgtttt ccgaacaact
     9001 gcgttgcgcc gtttcaggcg aaagctacat cagcccgtcg tggcacggac tgcactgcta
     9061 cggcgcgagt tttattccca acagcagcca taccggatgg aacgaagccg aagaagcctc
     9121 aaaccgccaa gcattggcac accttaaccc cgcccttgcc gaatcattgt ttgccgccaa
     9181 cccaaacccc caaaaatacc aagggcacgc cgccatacgc tgcgacagcc ccgaccacct
     9241 tcccctagtc ggcgcactcg gcgacattgc cgccatgcgg cagacctaca ccaaactcgc
     9301 gctggacaaa aactaccgca tcgacacccc atgcccatac ctgcctaatg cctacgtcaa
     9361 caccgcccac ggcacacgcg ggcttgccac cgcccccatc tgcgccgccg ccgttgcagc
     9421 cgaaatccta ggcttgcccc atcccctctc aaaacgcctg cgccacgccc tacaccccaa
     9481 ccgcaccatc atccgcgcca tcgtcagaag gaaggatcta accccttaag cctttgccgc
     9541 atgccgtccc gaccacagaa aatcatattc aaataaacat accaatcctg acggtaaaat
     9601 atcgaaaaca cccataacgt tttcttccca aaataaggag taaggaatgc ctaacaaatt
     9661 gcctttgctg tctaagatga atgttccgta acattcgaag acttccttaa ccctgccagc
     9721 cgtttcggtt tctgtacccc ctgttagata aggaaggaat gaaaaagccc tgttgattgt
     9781 atgaagtaaa gggcgttaat ttttgttaat cttcccttct caggaactca atatataagg
     9841 atgttaattt ttatttccct tctcgaggac tc
//
LOCUS       DBBZXU010000068         9794 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.068, whole genome shotgun sequence.
ACCESSION   DBBZXU010000068 DBBZXU010000000
VERSION     DBBZXU010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9794)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9794)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9794
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.068"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(138..509)
                     /locus_tag="ACJJDE_001449"
     CDS             complement(138..509)
                     /locus_tag="ACJJDE_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7541362.1"
                     /translation="MIKQNSFVPYPEAMLPKGFKYPQSYLKLAQSTHAINYDEQYSFP
                     WWFENAESNISEVIDIYFEITGIPNLLPFARNQEWAACFDISDKSGNPKIIVVNLDNT
                     KYYETFENFDTWLKEAENDGW"
     gene            complement(506..861)
                     /locus_tag="ACJJDE_001450"
                     /pseudo
     CDS             complement(506..861)
                     /locus_tag="ACJJDE_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504007.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(889..1095)
                     /locus_tag="ACJJDE_001451"
     CDS             complement(889..1095)
                     /locus_tag="ACJJDE_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541363.1"
                     /translation="MNILSINNQNSTISLTQDEVFVLRAILNEIYAGVCVDSREFENV
                     SGVRKHEVDNLQQQFAGIYKKMTT"
     gene            complement(1105..1950)
                     /gene="mafB"
                     /locus_tag="ACJJDE_001452"
                     /pseudo
     CDS             complement(1105..1950)
                     /gene="mafB"
                     /locus_tag="ACJJDE_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
     gene            complement(2047..2259)
                     /locus_tag="ACJJDE_001453"
     CDS             complement(2047..2259)
                     /locus_tag="ACJJDE_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541364.1"
                     /translation="MKLINFEESSVKISLDKDELYIIQAIVGEIYSGVCVDCRDFEII
                     HGVEKIKFFLWIKNLKKYMILGINVS"
     gene            complement(2336..2695)
                     /locus_tag="ACJJDE_001454"
     CDS             complement(2336..2695)
                     /locus_tag="ACJJDE_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 8 family protein"
                     /protein_id="HGG7541365.1"
                     /translation="MRLKLKNYDCSDFDLEDFPQDKLENFCILLTLSIGFDESNGADY
                     FYVYIYSTEWLLSNIHRPMSLKNSIVTNRFNIEHILKLINDILEICNSTSEDKSISNL
                     AKYFDWEFDDYNLNIQD"
     gene            complement(2700..4196)
                     /locus_tag="ACJJDE_001455"
     CDS             complement(2700..4196)
                     /locus_tag="ACJJDE_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012504008.1"
                     /note="MafB polymorphic toxins, described in Neisseria,
                     are fratricidal toxins the provide a competitive
                     advantage. Each MafB is accompanied by an immunity protein
                     MafI; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MafB family polymorphic toxin"
                     /protein_id="HGG7541366.1"
                     /translation="MNLPIQKFMMLFAAAISLLQIPISHANGLDARLRDDMQAKHYEP
                     GGKYHLFGDGRGSVKNRVYAVQTFDATAVGPILPITHERTGFEGVIGYETHFSGHGHE
                     VHSPFDHHDSKSTSDFSGGVDGGFTVYQLHRTGSEIHPEDGYDGPQGSDYPPPGGARD
                     IYSYYVKGTSTKTKTNIVPQAPFSDRWLKENAGAASGFFSRADEAGKLIWESDPNKNW
                     WGNRMDDIRGIIQGAANPFLTGFQGLGVGAITDSAVNPVTYAAARKTLQGIHNLGNLS
                     PEAQLAAATALQDSAFAVKDGINSAKQWADAHPNITATAQTALAVAEAATTVWGGKKV
                     ELNPTKWDWVKNTDYKTPAARPMQTLDGEMAGGNKPPKSITSGGKANAATYPQLVNQL
                     TGQNLKNIAAQDPRLSLALHKSEKNFPIGTATYEEADRLGKIWVGEGARQTSGGGWLS
                     IDGTRQYRPPTEKNSQFATTGIQANFETYTIDSNGKRNKIKNGHLNIR"
     gene            complement(4236..5198)
                     /gene="mafA"
                     /locus_tag="ACJJDE_001456"
     CDS             complement(4236..5198)
                     /gene="mafA"
                     /locus_tag="ACJJDE_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7541367.1"
                     /translation="MQARLLIPILFSVFILSACGTLTGIPSHGGGKRFAVEQELVAAS
                     ARAAVKDMDLQALHGRKVALYIATMGDQGSGSLTGGRYSIDALIRGEYINSPAVRTDY
                     TYPRYETTAETTSGGLTGLTTSLSTLNAPARSRTQSDGSGSRSSLGLNIGGMGDYRNE
                     TLTTNPRDTAFLSHLVQTVFFLRGIDVVSPANADTDVFINIDVFGTIRNRTEMHLYNA
                     ETLKAQTKLEYFAVDRTNKKLLIKPKTNAFEAAYKENYALWMGPYKVSKGIKPTEGLM
                     VDFSDIRPYGNHTGNSAPSVETDNSHEGYGYSDEVVRQHRQGQP"
     gene            complement(5382..6101)
                     /gene="pyrH"
                     /locus_tag="ACJJDE_001457"
     CDS             complement(5382..6101)
                     /gene="pyrH"
                     /locus_tag="ACJJDE_001457"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HGG7541368.1"
                     /translation="MTQQIKYKRVLLKLSGESLMGSDPFGINHDTIVQTVGEIAEVVK
                     MGVQVGIVVGGGNIFRGVSAQAGSMDRATADYMGMMATVMNALALKDAFETLGIKARV
                     QSALSMQQIAETYARPKAIQYLEEGKVVIFAAGTGNPFFTTDTAAALRGAEMNCDVML
                     KATNVDGVYTADPKKDSSATRYETITFDEALLKNLKVMDATAFALCRERKLNIVVFGI
                     AKEGSLKRVVTGENEGTLVHC"
     gene            complement(6320..7174)
                     /gene="tsf"
                     /locus_tag="ACJJDE_001458"
     CDS             complement(6320..7174)
                     /gene="tsf"
                     /locus_tag="ACJJDE_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003795802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HGG7541369.1"
                     /translation="MAEITAKMVADLRAATGLGMMECKKALVEAEGNFDKAEEILRIK
                     SGAKAGKLAGRTAAEGVLAYAINGNVGALVEVNCETDFVAKDAGFVEFANFVAKTAAE
                     KKPASVEELSELVEAERKAIIAKLGENMSVRRFQVIDTANQLVAYIHGALATEGVLVE
                     YKGSEDVARKIGMHIVAAKPQCVSEAEVDAETVEKERHIYTEQAIASGKPADIAAKMV
                     EGRIRKFLAEITLNGQAFVMNPDQTVAQFAKENGTEVVSFVRYKVGDGIEKAVVDYAA
                     EVAAAAKV"
     gene            complement(7303..8031)
                     /gene="rpsB"
                     /locus_tag="ACJJDE_001459"
     CDS             complement(7303..8031)
                     /gene="rpsB"
                     /locus_tag="ACJJDE_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HGG7541370.1"
                     /translation="MSQITMRQMIEAGVHFGHQTRFWNPKMAQYIFGARNKIHIVNLE
                     KTLPMFQDAQEAIRRLVANKGTVLFVGTKRQARDIIREEATRAGMPFVDYRWLGGMLT
                     NYKTVKQSIKRLEEKTAALENAAESGFSKKEILEMQRDVEKLERSLGGIKNMKGLPDA
                     IFVIDTGYQKGTLVEAEKLGIPVIAVVDTNNSPDGVKYVIPGNDDSAKAIRLYCRGIA
                     DAVLEGKNQALQETVAAAQEAAAE"
     gene            complement(8208..8441)
                     /locus_tag="ACJJDE_001460"
     CDS             complement(8208..8441)
                     /locus_tag="ACJJDE_001460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541371.1"
                     /translation="MWHIVAIGYLFVAVMYSAAQPSIARALIYLVFWAVLPTVFTVFV
                     VTVRRRNRLMKQQEQAEFEQQRAQRQKDSGTKP"
     gene            8519..9100
                     /locus_tag="ACJJDE_001461"
     CDS             8519..9100
                     /locus_tag="ACJJDE_001461"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HGG7541372.1"
                     /translation="MRNEEKRALRRELRGRRSQMGRDVRAAATVKINRLLKRYIKHGR
                     KIGVYWPMGKELRLDGFVRAAQKRGAKLYLPYIEPRSRRMWFTPYPESGMERERIRGR
                     ARLNVPQFAGRKIRVHGLSVLLVPLVGIDREGYRLGQAGGYYDATLAAMKYRLQAKTV
                     GVGFACQLVDRLSVEAHDLPLDGFVSEAGILCF"
     gene            9161..9751
                     /locus_tag="ACJJDE_001462"
     CDS             9161..9751
                     /locus_tag="ACJJDE_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HGG7541373.1"
                     /translation="MSEKIILPVLSLGGVRLEPLDVHHETGLREAVCDGEVWKLGVTS
                     APHPDRVADYIGTALATRLAFAVVDEEAGRVVGTTAYYHFEPQIPRLDIGFTWYAASA
                     RRTRINTCCKIMLLDYAFDVLACRCVGWRTDILNLASQRAIERLGAEKDGVLRMHMLR
                     KDGSVRDTVVYSMLREDWCKNREILTGRLAGYGVQV"
BASE COUNT         2371 a         2176 c         2293 g         2954 t
ORIGIN      
        1 tcattaatat cttgtaaagt ttgctgcgca gagatgtagg tcggatattt gtatccgaca
       61 aaaatatttg acgcgtctat cgtttccgaa atgccgctgt tggaaaatgt cggattcgag
      121 aatccgacct acggctgcta ccaaccatca ttttcagctt cttttagcca agtatcaaaa
      181 ttttcaaaag tctcgtaata ttttgtatta tctaaattaa ctactataat tttaggatta
      241 cctgatttat ctgaaatatc aaaacaggca gcccactctt ggtttctagc aaaaggtaat
      301 aggtttggaa tgccagttat ttcaaaataa atgtcaatta cttctgatat attgctttct
      361 gcattttcaa accaccaagg aaaagaatat tgttcatcgt agttaatggc atgagtggat
      421 tgagctaatt ttaaataact ttgcggatat ttaaatcctt taggaagcat tgcttcagga
      481 tacggaacaa aactattttg ttttatcatt tcctaagtac ctttacatca taaatacttc
      541 cgttaggaaa tcttttgctc cacccttctg gaactccttt ttgtgtttct tgctttctaa
      601 ttcgtagctg gatagcttct ccccaagttt gaggctcaat accatcatgc ttaaacctga
      661 ttctctcttt tgatgataat cggtcattaa aattatgaac attcgcttcc acttttaccc
      721 ctgcttcatg tgctgccata atacgcgtgt tatccatact agtaggtgct ccatcaggca
      781 tattaacaac atcaaccctg tcgccaaccc atgatttttt tcgttcattg cagctacaag
      841 agaatcatag ttgtaatttg cactaggctc tgacaaaaat ttgggttgtt aagttgtcat
      901 ttttttataa attccagcaa actgttgttg taaattatct acttcatgtt ttctaacacc
      961 agatacattt tcaaattctc ttgaatctac acatacgccc gcatatatct cattcaagat
     1021 agctcgtaaa acaaaaactt catcttgagt tagtgaaata gttgagtttt gattatttat
     1081 ggatagtata ttcatggctt tttcctataa atcatcataa tattttttac ctgatgttgg
     1141 tctaaatgct gtacctccat cgtcagaatt tttatctcgg ataactattg tccctgtttt
     1201 atcatcccaa tacgcagttc taccgcgagg taactctttc atatttgttg gatggctaac
     1261 aatattttca atatgccgag caaaatctgc tggtgaattg atatttaaat ccgtaaattc
     1321 ttgttgtctt atgacatgct tgttataagc atgcccacta ctaatttgtt ctccaattag
     1381 ttgcgcttgt aaagacggtt gtgtggaagc atctgctttg ctgttggacg ttatagattt
     1441 aggcggtcta ttcccccctg ccatctcccc atctacagtc tgcatatggc gggcagcagg
     1501 ttttttatag ccggtatttt taacccaatc ccatttggtc gggttaagtt ctactttttt
     1561 accgccccaa accgtagttg cggcctctgc tacggcaagg gcagtttggg ctgttgcagt
     1621 tatattcgga tgggcatcag cccattgttt ggcagagttg ataccgtctt ttaccgcaaa
     1681 agcactgtct tgtaatgcgg ttgcagccgc aagttgtgct tcgggactta aatttcctaa
     1741 atgattaata ccttgtagag tctgctgcgc ggctgtatct gtgaccgggc ttactgcact
     1801 gtctgtaatt gccccaatcc ctactccttg aaaacccatt aaaaaaggat taaccgcacc
     1861 ttggacgatg ccgcgaacat catccatacg gttagcccac caatttttat tggggtcgtt
     1921 ttcccatatc agttttcctg cttcatcagc acagttagga ttggcattga tgcccaccca
     1981 gtttcaggca gcctgaaaag gatttttaat atacggcaaa aggtgggcaa caagtgccca
     2041 ccttacctag ctaacattta tcccaagtat catatatttt tttaagttct ttatccaaag
     2101 aaagaacttt attttttcaa caccatgaat tatctcaaaa tctctacaat ccacgcatac
     2161 gcctgaataa atttctccta caattgcttg aataatatac aactcatctt tatcgagact
     2221 aattttaact gaactctctt caaaattaat taatttcatg aataattcct tttattttaa
     2281 ttcgtcatca aaataccgtt tgcctgtttt tggtctaaat gctgtcccac catctttagt
     2341 cttggatatt tagattataa tcgtcaaatt cccagtcaaa atattttgcc aaatttgata
     2401 tagacttatc ttcagacgtt gaattacata tttccaatat atcatttatc aattttaata
     2461 tgtgttcaat attaaaacgg tttgtaacaa ttgagttttt taatgacatc ggtctatgta
     2521 tatttgaaag taaccattca gtgctatata tataaacata aaaataatca gcaccattac
     2581 tttcatcaaa acctattgat aatgtcaaaa gtatacaaaa attttctaac ttgtcttgtg
     2641 ggaaatcttc caaatcaaag tcagaacaat cataattttt taattttaat ctcatataat
     2701 tacctaatat ttaaatgtcc atttttaatt ttattccttt ttccatttga atcaatagta
     2761 taagtttcaa aatttgcttg aatacctgta gttgcaaatt gtgaattttt ttctgttggt
     2821 ggccgatatt gtcgagtgcc atctatactt aaccatccgc ctccactagt ttgtcttgca
     2881 ccctcaccaa cccaaatttt acctagccta tctgcctctt cataagttgc agttcctatt
     2941 ggaaaatttt tttcactctt atgaagagct agactcaatc ttggatcttg agccgcaatg
     3001 ttttttaagt tttgcccagt taattgatta actaattgag gataagttgc agcattggct
     3061 tttcctccag acgttataga tttaggcggt ttattcccac cggccatttc cccatctaaa
     3121 gtctgcatag gtcgggcagc aggtgtttta taatcggtat ttttaaccca atcccattta
     3181 gtcgggttaa gttctacttt tttaccgccc caaaccgtag ttgcggcctc tgctacggca
     3241 agggcagttt gggctgttgc agttatattc ggatgggcat cagcccattg tttggcagag
     3301 ttgataccgt cttttaccgc aaaagcactg tcttgtaatg cggttgcggc cgcaagttgt
     3361 gcttccggac ttaaatttcc taaattgtga ataccctgta aagttttccg tgctgccgca
     3421 taggttaccg ggtttactgc actgtctgta attgccccaa ctcccaatcc ctgaaaaccc
     3481 gttagaaaag gattggctgc accttggatg atgccgcgaa tatcatccat acggttaccc
     3541 caccaatttt tattggggtc gctttcccat atcagttttc ctgcttcatc cgcacggctg
     3601 aaaaaaccag aggcggcacc ggcattttct tttagccaac ggtctgaaaa tggggcttga
     3661 gggacaatat tagtctttgt ttttgttgaa gttcctttga catagtagct gtatatatcc
     3721 cttgctcctc cggggggcgg ataatcgctg ccttgcggtc cgtcatatcc atcctccgga
     3781 tggatttccg accctgtccg atgaagttgg taaacagtaa aaccgccgtc tacaccgccg
     3841 ctgaaatcag aagtgctttt tgaatcatga tgatcgaacg gactgtgtac ttcatgtccg
     3901 tgccctgaaa aatgggtttc atagccgata acaccttcaa accctgtccg ttcgtgtgta
     3961 ataggcagta tggggccgac cgcagttgca tcaaatgttt ggacggcgta aacccgattt
     4021 ttaacactgc cgcgaccatc accgaacaga tggtatttgc cacccggttc gtagtgtttt
     4081 gcctgcatat catcgcgcaa acgggcatcc aaaccgttcg catgactaat ggggatttgc
     4141 agcaacgata ttgccgctgc aaacagcatc atgaattttt gaataggcaa attcattttg
     4201 ttttccttgg tagcaagcgg ttatggtagt gtgaatcaag gttgcccttg tctatgttgt
     4261 cgcactactt catcgctgta tccatacccc tcatgactgt tatcagtctc tacggatggg
     4321 gcggagttac ccgtatgatt gccgtatggt cggatatcgg agaaatcgac cattaatcct
     4381 tccgtcggtt taattccttt gcttacttta tacggcccca tccacaatgc gtaattttct
     4441 ttataggcag cttcaaacgc attggttttg ggtttgatga gcaatttttt attggttctg
     4501 tctactgcga aatattccag ttttgtttgg gctttcagtg tttcggcatt gtataggtgc
     4561 atttcggttc tgttgcgtat cgttccgaat acgtcgatgt taataaacac atctgtatcg
     4621 gcattggcag gagaaacaac gtctatgccg cgcaggaaaa atacggtctg taccaagtgg
     4681 gaaagaaagg cagtgtcgcg cgggttagtc gtcaaggttt catttcgata atcccccatc
     4741 ccgccaatat ttaagcccag actgctccta cttccgctac cgtctgattg ggtgcgcgag
     4801 cgtgcagggg cattaagtgt agataaagaa gtggttaaac ctgtcaaacc gcctgatgtt
     4861 gtttcagcgg tggtttcgta acgtggatag gtgtaatcgg tacggacggc agggctgttt
     4921 atgtattcgc cacgaatcag tgcatcaatg gagtagcgac cccctgtcaa actgcctgaa
     4981 ccttggtcgc ccatagttgc aatgtacaat gcaacttttc gtccgtgtaa tgcctgtaaa
     5041 tccatgtctt taacggcagc tctggcagaa gcggccacaa gttcttgttc gaccgcaaag
     5101 cgtttacctc cgccatgcga tggaatacct gtcagtgtcc cgcaggcgga taaaataaaa
     5161 actgaaaaaa gaataggtat cagcagccgt gcttgcatag attttctcct ttgatgaaaa
     5221 acaaattgta tcaaaattgt aaatatagtg gattaaattt aaaccagtac ggcaaggcga
     5281 ggcaacgccg tactggttta aatttaatcc actataatct ccatataata aatggctgtc
     5341 tgaagcccat atgcgactat atctgccgac actatggtca atcagcagtg aaccagcgta
     5401 ccttcgtttt caccggttac tacacgtttg agcgagcctt ctttagcaat gccgaatact
     5461 acaatattga gcttgcgttc gcggcagagg gcgaaagcgg tggcatccat cactttgagg
     5521 tttttcaaca aggcttcgtc aaaagtaatg gtttcgtagc gcgtggcgga tgagtctttt
     5581 ttggggtctg cggtgtacac gccgtcaacg ttggtggctt tgagcatcac gtcgcagttc
     5641 atttccgcac cgcgcaatgc ggcggcagtg tcggtcgtga agaacgggtt accggtaccg
     5701 gcggcaaaaa tcacgacttt gccttcttcc aaatattgga tggctttagg acgggcgtaa
     5761 gtttcagcga tttgctgcat agacagtgcg gattgtacgc gcgctttgat gcctaaagtt
     5821 tcaaatgcgt ctttgagtgc caacgcgttc atcacggtcg ccatcatgcc catgtagtcg
     5881 gcggtggcgc gatccatgct gcctgcttgg gcggatacgc cccggaaaat attgccgccg
     5941 ccgacaacaa taccgacttg cacgcccatt ttaacgactt cggcaatttc gccgacagtt
     6001 tgaacgatgg tatcgtgatt gatgccgaac ggatcggaac ccatcaggga ttcgccggag
     6061 agtttcagta atacgcgttt gtatttgatt tgctgtgtca tgggatacct tgctttcttg
     6121 aatgtcgtcg gtcggagttt gggccgtctg aatttcaaac ggtcggaata ttaatgatag
     6181 ggtgtgtcgg tttattattg ttttgttttc agacggcctt tatattcggt cgtcttaaaa
     6241 taggtaccgt aaacggtttt ctcaaaaaaa agcaccctga ttcgtttgga atccaggtgc
     6301 tttctttttc ataagtgcct tacactttgg cggctgcggc tacttcggct gcgtagtcga
     6361 caacggcttt ttcgatgcca tcgcctactt tgtagcgtac gaagctgacc acttcagtgc
     6421 cgttttcttt ggcgaattgg gcaacagttt gatcagggtt catcacgaat gcttggccgt
     6481 tcagagtgat ttcagccaag aatttgcgga tacggccttc aaccatttta gcggcgatgt
     6541 cggcaggttt gccggaagcg atggcttgtt cggtgtagat gtggcgttct ttttcaacgg
     6601 tttcagcatc tacttcggct tcgcttacgc attgtggttt ggcggcaaca atgtgcatac
     6661 cgattttgcg tgctacgtct tcagagcctt tgtactcaac caatacgcct tcggtcgcca
     6721 atgcgccgtg gatgtaggca accagttggt tggcagtgtc gatcacttgg aagcgacgga
     6781 cagacatgtt ctcgcccaat ttggcgatga tggctttgcg ttctgcttca accagttcgc
     6841 tcagttcttc aacagaagcc ggttttttct cggcagcagt tttcgcaacg aagttggcaa
     6901 attctacgaa gcccgcgtct ttagcaacga agtcggtttc gcagtttact tcaaccaatg
     6961 cgccgacatt gccgttgatt gcataagcca atacgccttc ggcagcggta cggccggcca
     7021 gtttaccggc tttcgcaccg gatttgatac gcaggatttc ttcggctttg tcgaagttgc
     7081 cttcggcttc aaccaaggct tttttgcatt ccatcatgcc caggccggta gcggcgcgca
     7141 gatcggcaac catttttgca gtaatttctg ccattttgaa tctcctagat ttttgggaaa
     7201 tacggaaagg attttccgca ttcgggaatc gtgtgccgcg aacggacgtt cagacggcat
     7261 atttgagaaa aggggcataa cgcccctctt cggtttgcca gattactcgg cagcggcttc
     7321 ttgggcagcg gctacggttt cttgcagcgc ttggtttttg ccttccaaaa ctgcgtcagc
     7381 gatgccgcgg cagtacaggc ggatggcttt ggcggagtcg tcgttgccgg ggatgacgta
     7441 tttcacgccg tcagggctgt tgttggtatc gactacggcg ataacgggga tgcccagttt
     7501 ttcagcctcg accagagtac ctttttggta gccggtatcg ataacgaaaa tcgcgtcggg
     7561 caggcctttc atgtttttga taccgcccaa agaacgttcc agtttttcaa catcgcgttg
     7621 catttccaga atttcttttt tgctgaaacc gctttcggca gcattttcca aggctgcggt
     7681 tttttcttcc aggcgtttga tggattgctt aacggttttg tagttggtca gcataccgcc
     7741 caaccagcgg taatcaacga aaggcatacc ggcgcgggtc gcttcttcgc ggatgatgtc
     7801 gcgggcttgg cgtttggtac ctacgaacaa tactgtacct ttgttggcaa ccaaacgacg
     7861 tatggcttct tgcgcgtctt ggaacatcgg cagggttttt tccaggttga cgatatggat
     7921 tttgttgcgc gcaccgaaaa tgtattgtgc cattttcggg ttccagaaac gggtttggtg
     7981 gccgaagtgg acaccggctt caatcatctg acgcatagta atttgagaca ttttgatttc
     8041 cttgaaaggg ttaagggcac acattcaatc gcatagaact tgataggcga cgcctattgt
     8101 caagcaccct tcggcgaaag tgggcataag ttttaaaaaa taaaagagtg tttccgaaat
     8161 ggaaaactga cggattatag cggataagag gccgtctgaa aagggattca gggttttgtg
     8221 ccgctgtctt tttgccgttg tgcacgctgc tgttcgaatt ctgcctgttc ctgttgcttc
     8281 atcaagcggt tgcggcggcg gacggttacg acgaagaccg tgaacacggt gggcagcacc
     8341 gcccaaaaaa ccaaataaat caaggcgcgc gcaatactcg gctgcgcggc ggaatacata
     8401 acggcaacaa aaagatagcc gatggcgacg atgtgccaca ttgtgtgcgt cctgtttgaa
     8461 tgttaacaaa atcgttataa tcgcaacatt ctaccgcaat cctgaaaggc cgtctgaaat
     8521 gaggaatgag gaaaaacgcg ccctgcgccg cgaattgcgc gggcggcgtt cgcaaatggg
     8581 gcgggacgtg cgggcggcgg caacggtaaa aattaaccgc ctgctcaaac gttatatcaa
     8641 gcacggtcgg aaaatcggcg tgtattggcc gatgggcaag gaattgcgtt tggacggctt
     8701 tgtccgcgcg gcgcaaaaac gcggcgcaaa actttatctg ccttatatcg aaccgcgttc
     8761 gcggcggatg tggtttacgc cgtatcctga aagcggaatg gaacgggagc gcatacgggg
     8821 cagggcgagg ttgaacgtgc cgcagtttgc agggcgcaaa atccgcgtgc acggtttgtc
     8881 ggtattgctc gttccgcttg tcggcataga ccgcgaaggc taccgtttgg ggcaggcagg
     8941 cggctattac gatgcgacgc ttgcagcgat gaaataccgt ttgcaggcaa aaaccgtggg
     9001 cgtgggcttt gcctgccagt tggtggacag actgtcggtc gaggcgcacg acctgccgct
     9061 ggacggtttt gtgtcggagg cggggatatt gtgtttttag ccgttcagac ggcattttga
     9121 acggaaatgc cgtctgaagg tggaatattg ggagaaaagg atgtcggaaa agataatact
     9181 gccggtcttg tcgttgggtg gcgtacggct cgaaccgttg gatgtgcatc atgaaacggg
     9241 tttgcgcgag gcggtttgcg atggggaagt ttggaagctg ggagtaacgt ccgcgcccca
     9301 tccggatagg gtggcagact atatcgggac agcattggca acgcgtttgg cgtttgcggt
     9361 tgtcgatgaa gaggcgggca gggtggtcgg gacaacggcg tattatcatt ttgaaccgca
     9421 gattccgcgt ttggatattg gattcacatg gtatgcggca tcggcacggc ggacacggat
     9481 aaacacctgt tgcaaaatca tgctgttgga ttacgcattt gatgttttgg cttgccgttg
     9541 cgtgggatgg cgcacggata ttctgaacct tgcctcgcaa cgtgccatcg aacggctggg
     9601 tgcggaaaaa gacggcgtgc tgcgtatgca tatgctccgt aaagacggca gtgtgcgcga
     9661 tacggtcgtg tacagtatgc tgagggaaga ttggtgcaaa aacagggaaa tcctgaccgg
     9721 caggttggca gggtatggcg tgcaggtgtg aggcagtatt ttcaaattta tagtggatta
     9781 acaaaaacca gtac
//
LOCUS       DBBZXU010000069         9793 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.069, whole genome shotgun sequence.
ACCESSION   DBBZXU010000069 DBBZXU010000000
VERSION     DBBZXU010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9793)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9793)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9793
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.069"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(9..1304)
                     /locus_tag="ACJJDE_001463"
     CDS             complement(9..1304)
                     /locus_tag="ACJJDE_001463"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HGG7541374.1"
                     /translation="MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKTDTCIIGGGLSG
                     LCTALPLAEQGHETVVLEAARIGFGASGRSGGQVISDYACGMEEIEKQVGLEQAQWFW
                     QQSLQAIELVDERVRKHTIDCDWQRGYATVAVRPQHWEELQQWHEHAQRHYGASHYQL
                     WDNTELKQQLDSDMYQGAQFDPLSGHLHPLNYTLGIARAAAEAGTKIFEHSPMIRIEP
                     YQNGWLVYTPEGSVECKNLVYAVNTYAGLNPIFRPLERKAIAVSTFIIATEPLGARAK
                     GLIRNNMAVCDNRHILDYYRLSADGRLLFGGKDNEFIDNPARMTELVRQDMLKVFPQL
                     ADVKIEYSWGGECDITANLVPHFGRLAPNVFYTQGYSGHGMAITGIAGLAVAEAILGD
                     ECRLKPFERLRQPNIILQPFLRKLGSFLGSKYYQWKDSR"
     gene            complement(1430..2317)
                     /locus_tag="ACJJDE_001464"
     CDS             complement(1430..2317)
                     /locus_tag="ACJJDE_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7541375.1"
                     /translation="MQKSKLSWFLKLMLALSLAFLYIPLVVLVVYSFNESKLVTVWGG
                     FSTRWYGALLENDTILEAAWLSLRIAVVSSLAAVVLGTLAGYAMARIKRFRGSTLFAG
                     MISAPMVMPDVITGLSMLLLIIQVQIFLQGSEWLQHLYFDRGFFTIFLGHTTLCMAYI
                     TVVIRSRLVELDQSLEEAAMDLGARPLKIFFVITLPLIAPAIASGFLLGITLSLDDLV
                     ITSFLSGPGSSTLPQVIFSKIKLGLDPQMNVLATILIGIIGTLVIIVNYWMMRQATKR
                     DREAAEAYRQEKLAAEKAN"
     gene            complement(2317..3282)
                     /locus_tag="ACJJDE_001465"
     CDS             complement(2317..3282)
                     /locus_tag="ACJJDE_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HGG7541376.1"
                     /translation="MNLNKLKNKLFRRPGQRAVIAVPYIWLLVLFLIPFAIVLKISFA
                     EQEIAIPPFTPLTSIDEDLGRLNIAISYQNYADIFQNFWHTLNPFGDSENSNIYLMTY
                     WSSIKTALMTTVICLLVGYPTAYAISRANPSVRNGLLLAIMLPFWTSFLLRVYAWMGL
                     LGHNGIVNNMLIKIGIISEPLDLFYNAFSLNLVMVYAYLPFMILPLYTQLVKLDNRLL
                     EAASDLGAGPVKSFLTITLPLSKTGIIAGSMLVFVPAVGEFVIPELVGGSENLMIGKV
                     LWQAFFDQNNWPLASAVAVVMVALLVVPIALFQHYENRELEEGAK"
     gene            complement(3298..4422)
                     /gene="potA"
                     /locus_tag="ACJJDE_001466"
     CDS             complement(3298..4422)
                     /gene="potA"
                     /locus_tag="ACJJDE_001466"
                     /EC_number="7.6.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015417 - ABC-type polyamine transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine ABC transporter ATP-binding protein"
                     /protein_id="HGG7541377.1"
                     /translation="MTATTASSTKPYLQIQGLVKKFGDNYAVDNIDLDIYQHEIFALL
                     GSSGSGKSTLLRMLAGMESPNQGKIILDGQDITKLAPYDRPINMMFQSYALFPHMTVE
                     QNIAFGLKQDKMPKGEIAARVEEMLRLVQMTKFAKRKPHQLSGGQQQRIALARSLAKR
                     PKILLLDEPLGALDKKLRQQTQLELVNTLEQVGVTCIMVTHDQEEAMTMATRIAIMSD
                     GQLQQVGTPSDVYDYPNSRFTAEFIGETNIFDGVVIEDHADYAVIECEGLENHVRIDH
                     GLGGPSEQDLWVSIRPEDIDLYKEKPEYLGDYNWAKGTVKEIAYLGSFAIYHIKLANG
                     RVVKSQVPAPYWYVRNITPPTWDETVYISWPENQPTPLFR"
     gene            complement(4617..4724)
                     /locus_tag="ACJJDE_001467"
                     /pseudo
     CDS             complement(4617..4724)
                     /locus_tag="ACJJDE_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="ACJJDE_001468"
     CDS             complement(4803..5072)
                     /gene="rpsO"
                     /locus_tag="ACJJDE_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019958878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HGG7541378.1"
                     /translation="MALTVEQKAQIVKDFQRKEGDTGSSEVQVALLTFRINDLTPHFK
                     ANPKDHHSRRGLLKMVSQRRRLLAYLRRTQPDTYRALITRLGLRK"
     gene            complement(5295..6230)
                     /gene="secF"
                     /locus_tag="ACJJDE_001469"
     CDS             complement(5295..6230)
                     /gene="secF"
                     /locus_tag="ACJJDE_001469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HGG7541379.1"
                     /translation="MELFKIKRDIPFMSYGKLTTFISLVTFIAAVFFLVTRGLNFSVE
                     FTGGTVMEVQYQQGADVNKMRERLDTLKIGDVQVQALGTNKHIMIRLPNKEGVTSAQL
                     SNQVMDLLKKDSPDVTLRQVEFIGPQVGEELVSNGLMALGFVVIGIIIYLSMRFEWRF
                     AVSAIIANMHDIVIILGCFAFFQWEFSLTVLAGILAVLGYSVNESVVVFDRIRENFRK
                     PAMRGHAVPEVIDNAITATMSRTIITHGSTEAMVVSMLVFGGAALHGFSMALTIGIVF
                     GIYSSVLVASPLLLMFGLSRDNIGKEPKKKEEIVV"
     gene            complement(6234..8087)
                     /gene="secD"
                     /locus_tag="ACJJDE_001470"
     CDS             complement(6234..8087)
                     /gene="secD"
                     /locus_tag="ACJJDE_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HGG7541380.1"
                     /translation="MNRYPLWKYLLIVFTIAVAAVYSLPNLFGETPAVQVSTNRQAII
                     INEQTQSKVDAALQNAGIQTDGMFVVDNSLKVRFKDTETQLKARDVIENTLGEGYITA
                     LNLLADSPEWMAKIKANPMFLGLDLRGGVHFTMQVDMKAAMQKTFERYSGDIRRELRR
                     EKIRSGTVRQAGNSLTVPLQDAGDVQKALPQLRKLFPEATLNSDGSNIVLTLSEEAVN
                     KVRSDAVKQNITTLHNRVNELGVAEPVIQQSGADRIVVQLPGVQDTAKAKDIIGRTAT
                     LELRMVEDDPAKLREALEGNVPSGYELLSSGGDRPETLLISKQVELTGDNINDAQPSF
                     DQMGAPAVSLSLDSAGGSIFGELTAANVGKRMAMVLIDQGKSEVVTAPVIRTAITGGR
                     VEISGSMTTAEANDTSLLLRAGSLAAPMQIVEERTIGPSLGKENIEKGFHSTLWGFAI
                     VAAFMVVYYRLMGFFSTIALSANILFLIGILSAMQATLTLPGMAALALTLGMAIDSNV
                     LINERIREELRAGVPPQQAINLGFQHAWATIVDSNLTSLIAGIALLVFGSGPVRGFAV
                     VHCLGILTSMYSSVVVFRALVNLWYGRRRKLQNISIGAVWKPEAETAAGKE"
     gene            complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="ACJJDE_001471"
     CDS             complement(8299..8565)
                     /gene="yajC"
                     /locus_tag="ACJJDE_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HGG7541381.1"
                     /translation="MNQAVAQFAPLVLIMVVFYFLIMRPQQKKFKAHQAMLAALKVGD
                     KVVLAAGFKGKVTRVGEQFFTVDIGQGTKIEVEVERNAIAAKVD"
     gene            8693..>9793
                     /locus_tag="ACJJDE_001472"
     CDS             8693..>9793
                     /locus_tag="ACJJDE_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HGG7541382.1"
                     /translation="MSLTRLILKFYALLRLFLGKNARTAWISHPACAGHEPGANHPDS
                     PDRILCIEQALRRAGIWQHLQTIEAEEISDTRLALVHSSKYLNRLESCLPQKGKIFRL
                     DNDTAISTGSLSAAHFAAGSAVQAVDMVMNRKAWHAFCAARPPGHHAGSGKAGGFCLL
                     NNVAAGVMHAIAEYRLKRIAVIDFDVHYGDGTAEIFKDDPRILFFNLFETDLFPFPEN
                     NDMPDGGNMVHLPLPPGTGSRTFREAVRRQWLPRLAAFKPELVLLSAGFDAHRLDESG
                     RLNLHEADFAWLTHKIIQTASGCPGKIVSVLEGGYTLEPLAQSAAEHIRVLAGLGKSD
                     AATAYQKTLDPTKKRFAKPKTGQVRQPTQSDRY"
BASE COUNT         2515 a         2575 c         2435 g         2268 t
ORIGIN      
        1 tgcgacgctt aacggctgtc tttccactga taatatttcg agccgaggaa agaaccgagt
       61 ttgcgcaaaa acggttgcag gataatattc ggctggcgca accgctcaaa cggcttcaga
      121 cggcattcgt cccctaaaat tgcttcggca accgccagac ctgcaatgcc tgttatcgcc
      181 atcccgtgtc cggaataacc ttgcgtataa aaaacattcg gggctaaacg tccgaaatgc
      241 gggacaaggt tggcggtaat gtcgcactcc ccgccccacg aatattcgat tttgacatcg
      301 gcaagctgcg gaaaaacttt aagcatatct tggcggacaa gctcggtcat acgcgcggga
      361 ttgtcgataa actcgttatc cttaccgccg aaaagcagtc tgccgtccgc gctgaggcgg
      421 taataatcca aaatatggcg gttgtcgcat actgccatat tgttgcggat aagccctttt
      481 gcacgcgcgc ccaagggttc tgtggcaata ataaaggtgc tgacagcaat cgccttgcgt
      541 tccaaaggcc ggaatatcgg attcaaaccg gcataagtat tgacggcgta caccagattt
      601 ttgcattcga cgctgccttc gggggtgtaa accagccaac cgttttgata aggttcaatg
      661 cgtatcatgg gagaatgctc aaaaatcttc gtaccagctt cggcagcggc gcgggcgatg
      721 cccaacgtgt aattgagcgg atggagatgc ccggacaagg gatcgaactg tgcgccttgg
      781 tacatatcgc tgtcaagctg ctgcttcagt tcagtgttat cccagagttg ataatgactc
      841 gcaccgtaat gccgttgggc gtgttcatgc cattgttgca attcttccca atgctgcgga
      901 cggacggcaa ccgtggcata accgcgctgc caatcgcaat cgatggtatg tttgcggacg
      961 cgttcgtcca ccagttcgat cgcctgcaaa gactgttgcc aaaaccattg cgcctgttcc
     1021 aaaccgacct gtttttcaat ttcctccata ccgcaggcgt aatcgctgat aacctgcccg
     1081 ccactccgtc ccgacgcgcc gaaaccgata cgcgcggctt ccaacacaac cgtttcatgt
     1141 ccctgctccg ccaagggcaa tgcagtgcac aaaccactca atccgccgcc gatgatacag
     1201 gtatcggttt tcagacggca ttgaagtttc ggataaacag tatgaggatt aaccgaactg
     1261 aaataataag aaggcagata ttcttgaaaa tcagggcgaa tcattgtgtt tgctttatcg
     1321 ggtatatttt cggacggaat gatacaggct gtcgagccat atcgtccaaa cagaaaatcg
     1381 gttgaagaaa acaggctgac ccagtcatgc ggtcagcctg ccttattaat taatttgctt
     1441 tctcggcagc caatttttct tggcggtagg cttctgccgc ttctcggtca cgcttggttg
     1501 cctgcctcat catccaataa ttgacgatga tgaccaatgt tccgatgatg ccgattagga
     1561 tggttgccaa aacgttcatc tgcggatcga gacccaactt gattttggag aaaatcacct
     1621 gcggcaatgt ggatgaaccg gggccggaga ggaatgaggt aatcaccaaa tcatccaaag
     1681 acagggtaat gccgagcaga aagcctgaag cgatggcagg ggcaatcaaa ggcaaagtga
     1741 tgacaaaaaa gattttcagc ggacgcgcgc ccaaatccat tgcggcttct tcgagcgatt
     1801 ggtcaagctc aaccagacgc gaacggataa caacggtaat gtatgccatg cacagcgtcg
     1861 tatgtcctaa gaaaatagtg aaaaagccac gatcgaagta gagatgttgt aaccattcgc
     1921 tgccctgcaa aaatatctgc acctgaataa tcagcagcag catagacagg ccggtaatca
     1981 cgtcgggcat caccataggc gcggaaatca taccggcaaa cagcgtgctg ccgcgaaaac
     2041 gtttgatacg cgccatcgca tagcccgcca gcgtgcccaa aacgacagcg gcaagcgaag
     2101 acacgacggc aatacgcagc gacagccaag cagcttccaa gatggtgtcg ttttccaaca
     2161 atgcgccgta ccacctggtc gaaaagccgc cccaaacggt aacgagcttg gattcgttaa
     2221 acgaatagac aaccaaaacg accagtggga tatacagaaa cgccagcgac aatgccaaca
     2281 tcagtttcaa gaaccaagac aatttggatt tctgcattat ttggctcctt cttccaattc
     2341 gcggttttca taatgctgaa acagggcaat cggcacgacc agcagcgcga ccatcacgac
     2401 ggcgacggcg gaagccagcg gccagttgtt ttgatcgaag aacgcctgcc acaagacttt
     2461 accaatcatc aggttttccg aaccgccgac cagctcggga atgacgaact cgccgacagc
     2521 agggacgaaa accaacatcg aacctgcaat aatgccggtt ttagacagag gcagtgtaat
     2581 cgtcaagaac gacttgaccg gtcccgcacc caaatcggaa gctgcttcga gcaggcggtt
     2641 gtcgagtttc accagctgcg tgtaaagcgg cagaatcata aacggcagat aggcataaac
     2701 catcaccagg tttaacgaaa acgcattgta gaacaaatct aatggctcgc tgataatacc
     2761 tattttaatc aacatattgt tgacgatgcc gttgtgcccg agcaggccca tccacgcata
     2821 gacgcgcaat aggaaagatg tccaaaaggg cagcataatg gcaagcagca aaccattgcg
     2881 gacagaagga ttggcacgag aaatcgcata ggcggtcgga taaccgacca acaggcaaat
     2941 cactgtcgtc atcaatgcgg ttttgattga agaccagtag gtcatcagat agatattgct
     3001 gttttcactg tcgccgaacg ggttaagggt atgccaaaaa ttttggaaaa tatcggcata
     3061 gttttgataa ctgatggcga tattcagacg acctaaatct tcgtcgatgc tggtcagcgg
     3121 cgtaaacggc ggaatggcga tttcttgttc ggcaaagctg attttcagca cgatggcgaa
     3181 cggaatcaga aacagcacca aaagccaaat atacggtacg gcaatcaccg cacgctgccc
     3241 cggacggcgg aacagtttgt ttttcagttt attaaggttc attgcattcc ccttaaatca
     3301 acggaacagt ggcgtaggct ggttttccgg ccagctgata tagacggttt cgtcccaagt
     3361 tggcggtgta atgttgcgca cataccagta aggggcgggg acttggctct tgacgacgcg
     3421 cccgttggcg agtttgatat ggtatatggc gaagctgccc aaataggcga tttcttttac
     3481 cgtgcctttc gcccagttgt agtcgcccaa atattcgggt ttttctttat ataaatcaat
     3541 atcctctggt cgaatactaa cccaaaggtc ctgctcgctc ggaccaccca aaccgtggtc
     3601 gatgcggacg tggttttcca aaccttcgca ttcgataacg gcatagtcgg catgatcttc
     3661 aatcaccaca ccgtcaaaaa tattggtttc gccgataaac tcggcagtga agcggctgtt
     3721 gggatagtcg tacacgtcgc tgggtgtgcc gacttgctgc aactgaccgt cggacataat
     3781 ggcgatgcgg gtcgccatcg tcatcgcctc ttcttggtcg tgtgtaacca taatacaggt
     3841 tacgccgact tgttccagcg tattgaccaa ctcaagctgg gtttgttggc gcagtttttt
     3901 gtccaacgcg ccgaggggct catccagcag tagaattttc ggacgttttg ccagactgcg
     3961 tgccaaagca atgcgctgtt gctgaccgcc ggacaattgg tgcggtttgc gtttagcaaa
     4021 tttagtcatc tgaaccaggc ggagcatttc ttcgacgcgc gcggcgattt cgcctttagg
     4081 cattttgtcc tgtttcagac cgaaggcaat gttttgttct acggtcatat gcggaaaaag
     4141 cgcgtaactt tggaacatca tattgatggg gcgatcatag ggtgcaagtt tggtaatatc
     4201 ctgaccatca aggataattt ttccctgatt gggactttcc atacccgcca gcatacgcag
     4261 cagcgtggat tttccgctgc cggaactgcc caaaagagcg aaaatttcgt gttgataaat
     4321 gtccaagtcg atgttatcga cagcgtaatt gtcaccaaac tttttcacca aaccttggat
     4381 ttgcagataa ggcttggttg aagacgcagt ggttgcggtc ataatggcaa tactccaata
     4441 aaaagacgag taccggcaaa acggatgttc gaatgggtga taaaaagctg tttgattgct
     4501 ggcgggagtt aaacgtttga tgccgtctga aactcttgta aagcgcacgg gcagcatgaa
     4561 atggaacaag attccaaaga actttatatt atattagttt atgcggtttt cgggcaatat
     4621 agtggattaa atttaaacca gtacagcgtt gccttgcctt gccgtactat ttgtactgtc
     4681 tgcggcttcg tcgccttgtc ctgatttaaa tttaatccac tataaatatg gatttgagct
     4741 tgtcggaaag caacagaaaa gaaaacaccg cccatttttc tgggcggtgt cggaaagcgt
     4801 aattatttac gcagacccaa gcgggtaatc aacgcgcgat acgtatcggg ctgggtacgg
     4861 cgcaagtagg ccagcaggcg gcggcgttgg ctgaccattt tcaacaggcc gcgacggctg
     4921 tggtggtctt tggggttggc tttgaagtgg ggggtcaggt cgttgatgcg gaaagtcaac
     4981 agagcgactt gtacttcgga agagccggtg tcgccttctt tgcgttggaa atctttaacg
     5041 atttgtgctt tttgttctac ggtcagtgcc ataatgaaaa ctccaaaaat ataagaatcc
     5101 ccatagggat tcagacaagt ttgccaagcc tgaagacaac ggcaaactcc ctatgcccaa
     5161 gataggacaa cgtggcatta tgacacaatt cccgcatttc tgcacaatat tttaagaccg
     5221 tggaagtaac cgttaaaaat gccgtctgaa gcattgtctg cttgagacgg caatgttcag
     5281 acggcatatg cgcttcaaac cacgatttct tctttcttct tcggttcttt accgatattg
     5341 tcgcggctca aaccgaacat tagcagaagc gggctggcaa ccaatacgga agaataaatg
     5401 ccgaacacga tgccaatggt caacgccata gaaaagccgt gcaaggccgc accgccgaac
     5461 accagcatgg atacgaccat cgcctcggtc gaaccgtggg taatgatggt gcggctcatc
     5521 gttgcggtaa tcgcgttgtc gatgacttcc ggcacagcat gtccgcgcat cgccggcttg
     5581 cggaagtttt cacggatacg gtcgaagacg acgacggatt cgttcacaga atagcccaat
     5641 acggcaagga tacccgccaa gacggtcagc gaaaattccc attggaagaa ggcaaagcag
     5701 ccgagaataa tcacgatgtc gtgcatattg gcgataatgg cagatacggc aaaacgccat
     5761 tcaaaacgca tcgacaggta aataatgatg ccgataacga caaaacctaa agccatcaat
     5821 ccattactta ccaattcctc accgacttgc gggccgataa attcgacttg gcgcaaggta
     5881 acgtcgggac tgtctttttt cagcaaatcc ataacctgat tggacaactg tgcggaagta
     5941 acaccttctt tgttcggcag gcggatcatg atgtgtttgt tcgtacccaa tgcctgaacc
     6001 tgtacatcac ctattttcag cgtatcgagg cgttcgcgca tcttattgac atccgcaccc
     6061 tgctgatatt ggacttccat taccgtaccg ccggtaaatt cgacagagaa attcagacct
     6121 ctggtaacca aaaagaatac ggcggcaata aaggtaacca acgaaataaa ggtcgtcagt
     6181 ttgccgtagc tcataaacgg aatatcgcgt ttgattttaa agagttccat agcttactcc
     6241 ttacctgccg cagtttcggc ttcaggtttc cataccgcac cgatggaaat attctgcaat
     6301 ttgcgtctgc gtccgtacca cagattgacc aacgcacgga atacgacgac ggaggaatac
     6361 atcgaagtca gaatacccaa acagtgtacg accgcaaaac cgcgtaccgg gccggaaccg
     6421 aataccaaaa gcgcgatacc ggcaatcagc gaagtcaggt tggaatcgac aatggtcgcc
     6481 catgcgtgtt ggaaaccgag attgattgcc tgctgcggcg gcacgccggc acgcaattct
     6541 tcgcggatac gttcgttaat caagacgttg gagtcgattg ccatacccaa agtcaacgcc
     6601 agcgcggcca tacccggtaa cgtcaacgtt gcctgcatgg cagacaaaat accgattagg
     6661 aacagtatgt tggcactcaa tgcaatggta gaaaagaaac ccatcagacg atagtaaacc
     6721 accatgaatg cagcaacgat ggcaaaaccc cataaagtcg aatggaagcc tttttcgatg
     6781 ttctccttac ccaaagacgg accgatggta cgttcttcga caatctgcat cggcgcggca
     6841 agagaaccgg cacgcaacag caaagacgta tcattggctt cggctgtcgt catgcttccg
     6901 gaaatttcca cgcgtccgcc ggtaatggca gtacggataa ccggcgcggt tacaacctcg
     6961 gattttcctt ggtcgatcaa aaccatcgcc atgcgtttgc cgacatttgc ggcagtcagt
     7021 tcgccaaaaa tgctgccacc cgcgctgtcc aagctcagac tgacggcagg tgcgcccatt
     7081 tggtcgaaac tcggttgcgc atcgttgatg ttgtcgcccg tcagctcgac ctgtttgctg
     7141 attagcagag tttcgggacg atctccgccg cttgaaagca gctcataacc gctcggcacg
     7201 ttgccttcca atgcctcgcg caacttggca ggatcgtcct ccaccatacg caattccaaa
     7261 gtcgcggtac ggccgatgat gtcttttgcc ttggcagtat cctgaacgcc cggaagctgc
     7321 acgacgatac ggtcggcacc ggactgctgg atgacgggtt cggccacgcc caactcgttc
     7381 acacggttgt gcagggtagt gatgttctgt ttgaccgcat cggaacgcac tttattgacc
     7441 gcctcttccg aaagtgtcaa gacgatattg ctgccgtctg aattcagcgt tgcttcagga
     7501 aacagcttgc gtaactgcgg cagtgccttt tgcacatcac ctgcatcctg caaagggacg
     7561 gtcaggctgt ttccagcctg acgcaccgtg ccgctgcgga ttttttcgcg gcgcagttcg
     7621 cggcggatgt cgcccgaata acgttcaaac gttttctgca tcgccgcttt catgtccacc
     7681 tgcatggtga aatgcacacc gccgcgcaag tccagaccca aaaacatcgg attggctttg
     7741 attttcgcca tccactcagg actgtctgcc aaaaggttga gtgcggtaat atacccttcg
     7801 cccaaagtat tttcgatgac gtcgcgcgct ttaagctgcg tttcggtgtc tttgaaacgc
     7861 actttcagtg aattgtccac aacaaacatc ccgtcggtct gaatacccgc gttttgcagc
     7921 gcggcatcca ctttggattg agtctgttcg ttgatgatga tggcttgtcg gttggtcgat
     7981 acctgcacgg cgggtgtttc gccgaatagg ttgggcagcg aatacactgc ggcaaccgca
     8041 atcgtgaaca caatcagcag atatttccat aaaggataac ggttcatcat tgttccttaa
     8101 tggttggaac cccacccttt cggtggtgtc ggaatcgggc tatttcagaa gaggcaaaaa
     8161 cccttcccag ccaggcaaga ccggaaggcg gcatcttgaa tatgccgccc tgcgtgtcgg
     8221 aacatggtca agccttcggt tggaattcaa aacaaagtgc cgcattcggg ctttccagat
     8281 gcggcttgtc ggcacaaatc aatcgacttt tgcggcaatc gcattgcgtt ctacttcgac
     8341 ctcgattttt gtaccctgtc cgatatccac ggtaaaaaac tgttcgccga ctctggttac
     8401 cttacccttg aaacctgccg ccaagaccac tttgtcgccg actttcaagg cggcaagcat
     8461 tgcctgatgc gctttgaatt tcttttgctg cggacgcatg atcaggaagt agaacaccac
     8521 cataatcaac actaaaggag caaattgtgc aacagcttga ttcataattt atccgttctt
     8581 tctaatatgg ttgaaaatcg agaggggtat ataataacat aagaccgtaa acaatatatc
     8641 gggtttgccg tccgtaccga ccgtataccg cagcctgccc gtccacaaac ccatgtcctt
     8701 gacccgccta atcttgaaat tctatgcact gttgcgcctt tttttgggca aaaacgcccg
     8761 caccgcatgg atttcgcatc ccgcctgtgc cgggcacgaa cccggcgcaa accatcccga
     8821 ttcgcccgac cgcatcctct gcatcgagca ggcattgcgc cgcgccggta tttggcagca
     8881 cctccaaacc atagaggcgg aagaaatcag cgatacgcgc ctcgcacttg tccactcgag
     8941 caaatatctg aaccgtttgg aatcttgcct gccccaaaaa ggcaagattt tccgcctgga
     9001 taacgacact gcaatcagca caggctcgct gtctgccgca cactttgccg ccggttcggc
     9061 agttcaggca gtcgacatgg tcatgaaccg taaagcatgg catgcctttt gcgccgcccg
     9121 cccgcccgga caccatgcgg gcagcggcaa agccggcgga ttctgcctgc tgaacaacgt
     9181 tgccgccggc gtcatgcatg ccattgccga ataccgcctg aaacgcattg ccgtcatcga
     9241 tttcgatgtc cactacggcg acggtacggc agaaatattc aaagacgatc cgcgcatcct
     9301 gtttttcaac ctgtttgaaa ccgacctttt ccccttcccc gaaaacaacg atatgcccga
     9361 cggcggcaat atggtgcacc tgcccttgcc gccgggaacg ggcagccgca cattccgcga
     9421 agccgtccgc aggcagtggc tgccccgact tgccgcattc aaacccgaac tggtgctgct
     9481 gtcggcagga ttcgacgcac accgtctaga cgaatcgggc aggctcaacc tgcacgaggc
     9541 ggattttgcc tggctgacac acaaaatcat tcagacggca tcgggctgcc ccggcaaaat
     9601 cgtatccgta ctcgaaggcg gctacaccct tgaacctctg gcacaatctg ctgccgagca
     9661 tatccgcgtg ctggcagggc tgggcaaatc cgatgccgca accgcctatc agaaaacact
     9721 ggacccaaca aaaaaacggt ttgccaaacc gaaaaccgga caggtgcgcc aacctaccca
     9781 atccgaccgt tac
//
LOCUS       DBBZXU010000070         9667 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.070, whole genome shotgun sequence.
ACCESSION   DBBZXU010000070 DBBZXU010000000
VERSION     DBBZXU010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9667
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.070"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(31..672)
                     /locus_tag="ACJJDE_001473"
     CDS             complement(31..672)
                     /locus_tag="ACJJDE_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HGG7541383.1"
                     /translation="MPSEKPMNRRTFLLGAGALLLTACGRKSARTHAKIPEGSTVLAL
                     GDSLTFGYGANPGESYPAQLQKLTGWNIVNGGVSGDTSAQALSRLPALLARKPKLVIV
                     GIGGNDFLRKVPKEQTRANIAKIIETVQKENIPAVLVGVPHITLGALFGHLNDHPLYE
                     DLSEEYGIPLFGGAWAEILGDNNLKSDQIHANGKGYRKFAEDLNQFLRKQGFR"
     gene            complement(662..1213)
                     /locus_tag="ACJJDE_001474"
     CDS             complement(662..1213)
                     /locus_tag="ACJJDE_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HGG7541384.1"
                     /translation="MNYCEFAASLPENTDNPNKHYHDTQYGFPIDSDNGLFERLVLEI
                     NQAGLSWTLMLKKRQAFQTAFEGFDINTVAAFDDTDRERLLADAGIVRNRLKIDAAIF
                     NARQIQALQQEYGSFKNWLDAHHPRSKDEWVKLFKKHFKFVGGEIVGEFLMSTGYLKG
                     AHAESCPVYRETLKYHPKWLDAI"
     gene            complement(1217..1735)
                     /locus_tag="ACJJDE_001475"
     CDS             complement(1217..1735)
                     /locus_tag="ACJJDE_001475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HGG7541385.1"
                     /translation="MRLFPIAAALTLAACGTVQSTQYFVLPDSRYIRPATQGGETAVE
                     VRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPAS
                     RSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
                     QGLKQAAQQMVE"
     gene            complement(1735..3396)
                     /gene="pqiB"
                     /locus_tag="ACJJDE_001476"
     CDS             complement(1735..3396)
                     /gene="pqiB"
                     /locus_tag="ACJJDE_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HGG7541386.1"
                     /translation="MTDNSPPPNGHAQARVRKNNTFLSAVWLVPLIALIAGGWLWVKE
                     IRNRGPVVTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKGVEVTAQLNADVS
                     GLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAI
                     GQSGLRLNLIGKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKL
                     IHSASRFWLESGINIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTL
                     YDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLH
                     LFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMI
                     ELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELN
                     GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYG
                     DVQNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKDPIPKGSR"
     gene            complement(3389..4723)
                     /locus_tag="ACJJDE_001477"
     CDS             complement(3389..4723)
                     /locus_tag="ACJJDE_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PqiA/YebS family transporter subunit"
                     /protein_id="HGG7541387.1"
                     /translation="MPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCR
                     ADVPRLDSGEAAFCPRCGHKLFRVGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPG
                     AASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVYAALIRKQAYPALR
                     LATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGPAFYLMFALSVMLIRTSVSV
                     PQHWVYFQIGRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLS
                     ISSAFLTAAVILYFPANILPIMISSNPAATEVNTILNGIAYMWDEGDRLIAAVIFSAS
                     ILVPVLKIAAMSVLIASARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIILMCSFH
                     TYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKHD"
     gene            5186..5815
                     /locus_tag="ACJJDE_001478"
     CDS             5186..5815
                     /locus_tag="ACJJDE_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biliverdin-producing heme oxygenase"
                     /protein_id="HGG7541388.1"
                     /translation="MSETENQALTFAKRLKADTTAVHDSVDNLVMSVQPFVSKENYIK
                     FLKLQSVFHKAVDHIYKDAELNKAIPELEYMARYDAVTQDLADLGDKPYEYGKPLPHE
                     TGNKAIGWLYCAEGSNLGAAFLFKHAQKLDYNGEHGARHLAPHPDGRGKHWRAFVEHL
                     NALNLTPEAEAEAIQGAREAFAFYKVVLRETFGLAADAEAPEGMMPHRH"
     gene            5990..8365
                     /gene="hmbR"
                     /locus_tag="ACJJDE_001479"
     CDS             5990..8365
                     /gene="hmbR"
                     /locus_tag="ACJJDE_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent hemoglobin receptor HmbR"
                     /protein_id="HGG7541389.1"
                     /translation="MKPLQMLPIAALVGSIFGNPVLAADEAATETTPVKAEIKAVRVK
                     GQRNAPAAVERVNLNRIKQEMIRDNKDLVRYSTDVGLSDSGRHQKGFAVRGVEGNRVG
                     VSIDGVNLPDSEENSLYARYGNFNSSRLSIDPELVRNIEIVKGADSFNTGSGALGGGV
                     NYQTLQGRDLLLDDRQFGVMMKNGYSTRNREWTNTLGFGVSNDRVDAALLYSQRRGHE
                     TESAGNRGYAVEGEGSGANIRGSARGIPDSSKHKYHSFLGKIAYQINDNHRIGASLNG
                     QQGHNYTVEESYNLTASSWREADDVNRRRNANLFYEWMPDSNWLSSLKADFDYQKTKV
                     AAVNNKGSFPMDYSTWTRNYNQKDLDEIYNRSMDTRFKRFTLRLDSHPLQLGGGRHRL
                     SFKTFVSRRDFENLNRDDYYFSGRVVRTTSSIQHPVKTTNYGFSLSDQIQWNDVFSSR
                     AGIRYDHTKMTPQELNAECHACDKTPPAANTYKGWSGFVGLAAQLNQAWHVGYDITSG
                     YRVPNASEVYFTYNHGSGNWLPNPNLKAERSTTHTLSLQGRSEKGMLDANLYQSNYRN
                     FLSEEQKLTTSGTPGCTEENAYYGICSDPYKEKLDWQMKNIDKARIRGIELTGRLNVD
                     KVASFVPEGWKLFGSLGYAKSKLSGDNSLLSTQPLKVIAGIDYESPSEKWGVFSRLTY
                     LGAKKAKDAQYTVYENKGWGTPLQKKVKDYPWLNKSAYVFDMYGFYKPAKNLTLRAGV
                     YNVFNRKYTTWDSLRGLYSYSTTNSVDRDGKGLDRYRAPSRNYAVSLEWKF"
     gene            8737..8982
                     /locus_tag="ACJJDE_001480"
     CDS             8737..8982
                     /locus_tag="ACJJDE_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HGG7541390.1"
                     /translation="MFQANIHQAKTNLSQLIQRAEAGEIVIIAKAGKPCVQLTGIEKP
                     ARNAGRLKKFSHMGNTDISRILEDDNETAALFEESAL"
     gene            8979..9365
                     /locus_tag="ACJJDE_001481"
     CDS             8979..9365
                     /locus_tag="ACJJDE_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HGG7541391.1"
                     /translation="MRKILLDTHALLWWLLDDKKLGTSARKLIENPRNAIFVSAASIW
                     EISIKQNKGLLKLPEEFFDVLQEEDFEMLPIGLFHAKQAGSLPEIHKDPFDRMLIAQT
                     QAEGFELMTVDEYIPQYGIRVVNASS"
BASE COUNT         2450 a         2365 c         2553 g         2299 t
ORIGIN      
        1 taaacaactt gggtgcggat aaacctttgt ttatctaaac ccctgttttc tcaaaaattg
       61 attcaaatct tcggcaaatt tccgatagcc tttgccgttg gcgtggattt ggtcggattt
      121 cagattatta tcgcccaaaa tttccgccca cgcgccgccg aacagcggaa tgccgtattc
      181 ctcggacaaa tcctcataca gcggatgatc gttcaaatgc ccgaacaacg cgcccaaggt
      241 aatgtgcggc acgccgacga ggacggcggg gatgttttcc ttctgcacgg tttcgatgat
      301 tttcgcgata ttggcgcggg tctgctcctt gggaactttg cgcagaaagt cgttgccgcc
      361 tatgccgaca atcacaagct tgggtttgcg tgccaacagc gcgggcaggc gcgacagggc
      421 ttgggcggat gtatcgcccg atacgccgcc gttgacaata ttccaacccg tcagtttttg
      481 cagttgcgcg gggtaggatt cgccagggtt tgcgccgtag ccgaaggtaa gcgaatcgcc
      541 caaggcaagt acggtgcttc cttcgggaat tttggcgtgg gttcgggcgg attttctgcc
      601 gcaggcggta aggagcaacg cgcctgcgcc gaggaggaag gttcttctgt tcattggttt
      661 ttcagatggc atcgagccat ttcgggtggt atttcagggt ttcacggtaa accggacagc
      721 tttcggcgtg cgcgcctttg aggtagccgg tactcatcag aaattcgccg acgatttcgc
      781 cgccgacgaa tttgaaatgt tttttaaaga gtttaaccca ttcgtctttg cttcgcggat
      841 ggtgcgcgtc gagccagttc ttgaacgagc cgtattcttg ttgcaacgct tggatttgcc
      901 gtgcattgaa aatggcggca tcgattttca ggcggttgcg gacgatgccc gcgtcggcaa
      961 gcaggcgttc gcggtcggtg tcgtcgaagg cggcaacggt attgatgtcg aaaccttcaa
     1021 atgccgtctg aaacgcctgc cgcttcttca gcatcagcgt ccagcttaat cctgcctgat
     1081 tgatttccaa caccagccgt tcaaacagtc cgttgtcgct gtcaatcgga aaaccgtatt
     1141 gcgtgtcgtg gtaatgtttg ttcgggttat cggtgttttc gggaagtgag gcggcaaatt
     1201 cgcaatagtt cacggtttac tcgaccatct gttgcgccgc ctgtttcagt ccctgttcga
     1261 gtgcggcggt catcgcggcg tagccgtcac cctgctgttc ggtttcgata tggaagggtc
     1321 tgttcgtacc gtcgggtagg acggcgtagc cgctgatgag ggttttgccc gtgtagctgc
     1381 cttggaatgc gtcgatatag accgtccatt tttcggtact gccgctgcgt gaggcaggaa
     1441 caaagatgcg tgtgttgtcc aaacggttga atgcattgct caacgccgct tcgagcatat
     1501 cgtccaaggt gtctgcccaa acgtggtttt gtgcggtgtt gaggcggtag gggtcggttt
     1561 gatagaccag tccgccgcgt ttgagcggtt cggcaagacg gacttcgacg gcggtttcgc
     1621 cgccttgtgt tgcaggacgg atgtagcggc tgtcgggcaa cacgaaatat tgtgtgcttt
     1681 gcacagtacc gcaggcggca agcgtcaggg cggcggcaat cgggaagagg cgcattatcg
     1741 gcttcctttc gggatggggt ctttgctgct gctgttgaaa atcagcgcgt tgggtttttc
     1801 tttcaaagtg ttaatgacgg gttgaacgtc ttttaaggtt ttgtccaaac tttgcaacgt
     1861 attttgtacg tcgccgtaga taggcgattg cggcgatacg ccttgcaggg ttgtgcgcaa
     1921 ctctttcagg gtttggttca gttcgttcgg aatgttttgt gtctgcggtt tgccgaccag
     1981 tttgtcgatg gagcttaggg cggcattggc agatttgagt gtggatttga gctcggcaag
     2041 cgaaccgttc aattcggcaa ccgtcttatc taaaggcagt ttgccgaatt tgtccagcaa
     2101 atccgccaat ttgacctgca aatcgtccaa accgccgccc tgggtcgcga taacggtatc
     2161 gcctgcataa acggtatgcg gtcgcagctt aggtgatgcg gaaggctgat cgttcaactc
     2221 aatcattttg cttccggtca gcaggttgtt gctggagatg gtggcggtca ggcctttgtt
     2281 taaggccgtc tgaaattgtt gtttccaatg ttctttgctt tgttcgtcgg cattgatttc
     2341 caaacgggaa ggttcaatgc ggatgcgtac gggtatccag ccgttttcaa acaggtgcag
     2401 gctgtcgttg cggtcgaaat aaggaacgtc ggaaaccacg ccgacattca gccctttgta
     2461 ctcgacgggc gaaccgacgg tcaggccgcg cacggattgt ttgaaaaacg cggtgtagta
     2521 cagcgagcgg tcgtcaggca ggttggcgac ttcgctgcgg ctgtcgtaaa gcgtgaagct
     2581 gtcttcgctt ttgacgtttt tactgttttt ggttttcggc gaatcaaatg aaatcgcgcc
     2641 cgacagcagg gcaggcagag gggcggaatt gagtttgatg ccgctgcctg tggtttcgat
     2701 attgatgccg ctttccagcc agaaacggct ggcggaatga atcagtttgt cgttggggct
     2761 ttggatgaag atggtgtaat gcacgctttg gtcggacggg tcgaaatgcg cgctttcgac
     2821 ttgcccgacc ataaagtttt catacaaaac agggctgttg acgttgagga tgcggtcgtt
     2881 tttaccaatc aaattcaagc gcagcccgct ttgcccgatg gcggtaacgg gcggaatgtc
     2941 ctgcacttgg aacacgtctt ttgcctcgtc gcttttgccg ggtgtaaagg cgatgtacga
     3001 acccgaaagc agcgtaccca aaccggttac gccgctttgg tcgatacgcg gcttgaccac
     3061 ccaaaactgg gtatcgctgc ggatgaggcc ggatacgtcc gcattgagtt gggcggttac
     3121 ttccacgcct ttttggtcgt cgcgcagttt gattcgggta acgcgtccga catcgatgct
     3181 caatactttg atgaccgtat tgttgacctc aatgccttcc gcgctgtcca tcaagagcgt
     3241 aaccacaggc cccctgttgc ggatttcctt aacccaaagc cagccgccgg caatcagcgc
     3301 gatcagcgga accagccaga cggcagagag gaaggtgttg tttttgcgga cgcgtgcttg
     3361 ggcgtgtccg tttggaggag ggctgttgtc agtcatgttt ttccgtttca ttgaaagcaa
     3421 tgccgtctga agcgcgtttg tcccaaagca ggcgcgggtc gaaataatag gcggacagca
     3481 tcgtcagaat cacgaccagg cagaaataga ctgccgcact gcccggaatg acgcgcgcgg
     3541 cataagtgtg gaacgaacac atcaaaataa taatcacaaa aatatcaatc atcgaccagc
     3601 ggccgaccgc ttcggtgatg cggtagaggt gcgacaattt ctttgcaccc gttggcaaag
     3661 cgaagcgggc ggacgcaatc aaaaccgaca ttgccgcaat cttcagtacc ggcaccaaaa
     3721 tactcgcgct gaaaataacc gccgcaatca gcctgtcgcc ctcgtcccac atataagcga
     3781 tgccgttaag gatggtattg acctccgtgg cggcaggatt ggacgaaatc ataatcggca
     3841 ggatattggc agggaaatac aaaataaccg ccgccgtcag aaacgccgac gaaatactca
     3901 gacttttcgg ccgtcggcgg tacagttccg caccgcacac gccgcagggg gattcggcac
     3961 tgtcgcggaa atacaggcag cggctgcaac aggttttacc ttccgatgcc gtctgaaccg
     4021 cattatcccc cgtcagccgc ccgatttgaa aatacaccca atgctgggga accgataccg
     4081 aagtccgaat cagcataacc gacagcgcga acatcagata aaacgccggc ccgaagcgaa
     4141 cctctgccac agacgagagc ttgatatacg ccaccaaagt ggaaacaaaa aacacatcca
     4201 ccatcatcgc ctgtctcaag cgcaccatca cacgcgttgc caaacgcagc gcaggatacg
     4261 cctgtttccg tatcagcgcg gcatagacat acaggcacag cagcagaaac agaaccggcg
     4321 cgccgaaagt cagcacaaac atcacttcgg ccaaaaaacc ataatcctga aacaccatca
     4381 ggcgcatcat ctcgggcagc gaaaggacgg atgccgcacc cggtatcccg acctcgatat
     4441 acgtcatacc gtaagcaaac gccattaaaa tcagcgaagc cgccgcatag gcgggcgggg
     4501 cggaaaaagg atgcctgccc accctgaaga gtttgtgtcc gcaacgggga cagaacgccg
     4561 cttctccact gtccaaccgg ggtacatccg cgcggcagcc gcattccgga caatctaccg
     4621 tatgcggcgg cagggcttcg tcgcagcagt tgccgcgaag gctgtggggg atattttcgg
     4681 caaacggctt catcgggaaa gtggcaaata taagtggcgg cattataaag gaaaaaaggc
     4741 gatacaccca atcaggatgc aaaaccggca ggttcggcag tatgaacaaa cccttggtgt
     4801 ccggcaaaaa tattttttga gcggttgtcc gccgactgcc gaacccattt gataaaatcc
     4861 cgattctgta aagaatagta aaatacctgc ttaaaaacat cacgcaaatg atattttttc
     4921 caaaaatatg tgataataaa tttcgtttat gattctttat tatttttata gtggattaac
     4981 aaaaatcagg acaaggcggc gaagccgcag acagtacaaa tagtacggaa ccgactcact
     5041 tggtgcttca gcaccttaga gaatcgttct ctttgagcta aggcgaggca acgccgtact
     5101 ggtttttgtt aatccactat atatgcgggc aagtgcggat tttgcccgca ccgcatcctt
     5161 atcccttacc gacaaaggaa aaaatatgag tgaaaccgaa aatcaagcat tgacatttgc
     5221 caaacgcttg aaggcggata ccacggcggt tcacgacagc gtggataacc tcgttatgtc
     5281 tgtccaaccg tttgtcagca aagaaaacta catcaaattt ttgaaactcc aatccgtttt
     5341 ccacaaggct gtcgaccaca tctataaaga tgccgaatta aacaaagcca ttcccgagct
     5401 ggaatacatg gcgcgatacg atgccgtaac gcaagacctt gcagatttgg gtgacaaacc
     5461 ttacgaatac ggcaaaccgc tgccgcatga aaccggcaac aaagcaatcg gctggcttta
     5521 ttgcgccgaa ggatccaatt tgggcgcggc gtttttgttc aaacacgccc aaaaactcga
     5581 ttacaacggc gaacacggcg cgcgccacct cgctccgcat cccgacgggc gcggcaaaca
     5641 ctggcgtgcc ttcgtcgagc atctgaacgc tttgaacctg actcccgaag ccgaagcgga
     5701 agccatccaa ggcgcgcgcg aagcctttgc attctacaaa gtcgtgttgc gcgaaacctt
     5761 cggtttggca gccgatgccg aagcaccgga aggaatgatg ccgcacaggc actaaaaaat
     5821 aatcgaacca aataaacaag gtctcggcat agctgtttgc agggaccttt aattacacgg
     5881 cgcggctttg tttacatgga ttactgtctt attaaatatt aatgattatc ataaaatcta
     5941 ttattcgcta accgatggat gaacaatcca tacatcttga gttgataata tgaaaccatt
     6001 acaaatgctc cctatcgccg cgctggtcgg cagtattttc ggcaatccgg tcttggcagc
     6061 agatgaagct gcaactgaaa ccacacccgt taaggcagag ataaaagcag tgcgcgttaa
     6121 aggtcagcgc aatgcgcctg cggctgtgga acgcgtcaac cttaaccgta tcaaacaaga
     6181 aatgatacgc gacaataaag acttggtgcg ctattccacc gatgtcggct tgagcgacag
     6241 cggccgccat caaaaaggct ttgctgttcg cggcgtggaa ggcaaccgtg tcggcgtgag
     6301 catagacggt gtaaacctgc ctgattctga agaaaactcg ctgtacgccc gttatggcaa
     6361 cttcaacagc tcgcgtttgt ctatcgaccc cgaactcgtg cgcaacatcg aaatcgtgaa
     6421 gggcgcagac tctttcaata ccggcagtgg tgcattgggc ggcggtgtga attaccaaac
     6481 gctgcaaggc cgtgatttgc tgttggacga caggcaattc ggcgtgatga tgaaaaacgg
     6541 ttacagcacg cgtaaccgtg aatggacaaa tactctcggt ttcggtgtga gtaacgaccg
     6601 cgtggatgct gctttgctgt attcgcaacg tcgcggtcat gaaaccgaaa gcgcgggaaa
     6661 ccgaggctat gctgtggaag gggaaggcag tggcgcgaat atccgtggtt cggcacgcgg
     6721 tatccctgat tcgtccaaac acaaatacca cagctttttg ggtaagattg cttaccaaat
     6781 taacgataac caccgcatcg gcgcatcgct taacggccag cagggacata attacacggt
     6841 tgaagagtct tataacctga ccgcttcttc ctggcgcgaa gccgatgacg taaacagacg
     6901 gcgcaatgcc aacctctttt acgaatggat gcctgattca aattggttgt cgtctttgaa
     6961 ggcggacttc gattatcaga aaaccaaagt ggcggcggtt aacaacaaag gctcgttccc
     7021 gatggattat tccacctgga cgcgcaacta taatcagaag gatttggacg aaatatacaa
     7081 ccgcagcatg gacacccgat tcaaacgttt tactttgcgt ttggacagcc atccgttgca
     7141 actcgggggg gggcgacacc gcctgtcgtt taaaactttc gtcagccgcc gtgattttga
     7201 aaacctaaac cgcgacgatt attacttcag cggccgtgtt gttcgaacca ccagcagtat
     7261 ccagcatccg gtgaaaacca ccaactacgg tttctcactg tctgaccaaa ttcaatggaa
     7321 cgacgtgttc agtagccgcg caggtatccg ttacgaccac accaaaatga cgcctcagga
     7381 attgaatgcc gagtgtcatg cttgtgacaa aacaccacct gcagccaaca cttataaagg
     7441 ctggagcggt tttgtcggct tggcggcgca actgaatcag gcttggcatg tcggttacga
     7501 cattacttcc ggctaccgcg tccccaatgc gtccgaagtg tatttcacct acaaccacgg
     7561 ttcgggtaat tggctgccta atcccaacct gaaagccgag cgcagcacca cccacaccct
     7621 gtctctgcaa ggccgcagcg aaaaaggcat gctggatgcc aacctgtatc aaagcaatta
     7681 ccgcaatttc ctgtctgaag agcagaagct gaccaccagc ggcactcccg gctgtactga
     7741 ggaaaatgct tactacggta tatgcagcga cccctacaaa gaaaaactgg attggcagat
     7801 gaaaaatatc gacaaggcca gaatccgcgg tatcgagctg acaggccgtc tgaatgtgga
     7861 caaagtagcg tcttttgttc ctgagggttg gaaactgttc ggctcgctgg gttatgcgaa
     7921 aagcaaactg tcgggcgaca acagcctgct gtccacacag ccgctgaaag tgattgccgg
     7981 tatcgactat gaaagtccga gcgaaaaatg gggcgtattc tcccgcctga cctatctggg
     8041 cgcgaaaaag gccaaagatg cgcagtacac cgtttatgaa aacaagggct ggggtacgcc
     8101 tttgcagaaa aaggtaaaag attacccgtg gctgaacaag tcggcttatg tgtttgatat
     8161 gtacggcttc tacaaaccgg ctaaaaacct gactttgcgt gcaggcgtat ataatgtgtt
     8221 caaccgcaaa tacaccactt gggattccct gcgcggcctg tatagctaca gcaccaccaa
     8281 ctcggtcgac cgcgatggca aaggcttaga ccgctaccgc gccccaagcc gtaattacgc
     8341 cgtatcgctg gaatggaagt tttaatctgg tattattgaa ttaatcgcct tgttgaaaat
     8401 taaagccgtc cgaattgtgt tcaagaactc attcggacgg ctttttaccg taaatctgtg
     8461 tgatggggtt ttatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcagacagt
     8521 acagatagta cggaaccgat tcacttggtg cttcagcacc ttagagaatc gttctctttg
     8581 agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actataaata gcaaggtgtg
     8641 aataaaacgg cggatataat caaatatatg taatgagatt cccaaaatct tggtaatgat
     8701 gtatattagt taagttagct aatcatgaga agtgttatgt ttcaagcaaa tattcatcag
     8761 gcaaaaacca atttgagtca attgattcaa agagcagaag caggggaaat cgttattatt
     8821 gcgaaagcag gtaagccttg cgtccaacta accggtattg aaaaaccggc acgaaatgca
     8881 ggaaggttga aaaaattcag tcatatggga aatacggata tttcacgtat tcttgaggat
     8941 gacaatgaaa cggcagcttt atttgaggag tcggctctgt gagaaagatt ctgcttgata
     9001 cccatgcttt gctgtggtgg ttgttggatg acaagaaact ggggacatct gcacgcaaac
     9061 tgatagaaaa tccgagaaat gcgatctttg tcagtgcagc aagtatttgg gaaatttcca
     9121 tcaagcagaa caaggggttg ttgaaattac cggaagagtt ttttgatgtg cttcaagaag
     9181 aggattttga aatgctgcct ataggtctgt ttcatgcaaa acaggctgga agccttccgg
     9241 aaatacacaa agaccctttc gataggatgt tgattgcaca aacccaagcg gaaggctttg
     9301 aactgatgac tgtcgatgaa tatattccgc aatatggaat tagagttgtc aatgcatcaa
     9361 gctgacaaat ataaaaactg tgtacacaag aaagaccgcc gaggcggtct tttcggttat
     9421 tgtcttcgct taaaagccag acttccgtcg cggcctataa acgcgggaaa tccgcgtgta
     9481 taggcatagt tggcgaccac aagtgcaacc ttaagtgcat ctcccaactt tggcagggtg
     9541 tggtatgcac gcatgtattc tatatcctgt ccatcaaatt tgggcaagac ttcgctattg
     9601 aaccgtttga tcttcctttc ctaaaaaagc gcataaagag caggtactta atatatatgg
     9661 ctgtgtt
//
LOCUS       DBBZXU010000071         9629 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.071, whole genome shotgun sequence.
ACCESSION   DBBZXU010000071 DBBZXU010000000
VERSION     DBBZXU010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9629
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.071"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(331..1773)
                     /gene="aldA"
                     /locus_tag="ACJJDE_001482"
     CDS             complement(331..1773)
                     /gene="aldA"
                     /locus_tag="ACJJDE_001482"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HGG7541392.1"
                     /translation="MKQLAMYINGRFENDFNGEWRDVLNPSTEEAIAREPKGGRADVD
                     RAVAAARAAQPAWERLPAVERGAYLRKIAQGIRERADELTDTIVAEGGKTKDLARVEV
                     MFTADYLDYQAEWARRYEGEIIQSDRPRENILLFKRPLGVIAGILPWNFPFFLIARKM
                     GPALVTGNTIVVKPSSVTPINCHIFAEIVDAVGLPAGVFNVVNGPGAEIGNALSAHPQ
                     VDMVSLTGSVEAGRQVMEAASANITKVSLELGGKAPAIVLKDADLDLAVKSILASRVG
                     NTGQICNCAERVYVHSSLKDAFIEKMTAAMKGVRYGNPAEAEAGALEMGPLIEERAVK
                     AVAEKVERAVKQGAKLVCGGKRAEGRGYFFEPTLLTDTDNSMDIMKEETFGPVLPVSA
                     FDTLDQVIALANDCEFGLTSSVYTTNLNEAFYVTRRLQFGETYINRENFEAMQGFHAG
                     WKKSGIGGADGKHGLEEYLQTQVVYLETDI"
     gene            complement(1808..2008)
                     /locus_tag="ACJJDE_001483"
     CDS             complement(1808..2008)
                     /locus_tag="ACJJDE_001483"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541393.1"
                     /translation="MDTVGSLAIGYATGGNAGAFTGANADWNNRQLHSSEYKLAEQYA
                     DIVASRLNISKETCTVIYLGIN"
     gene            complement(2017..2406)
                     /locus_tag="ACJJDE_001484"
     CDS             complement(2017..2406)
                     /locus_tag="ACJJDE_001484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541394.1"
                     /translation="MLYKCKIKKLDNTIEEAVLIEINGYELHCFISYCPFKIFENQFY
                     EVELSYEIFNDYILDKSTSNIGFRKIDDSFKYEITAELKNNHLTLQNIQFEEDEYLIN
                     YSYLDNCLVTLTVDRISVSFIREIQAA"
     gene            complement(2407..2583)
                     /locus_tag="ACJJDE_001485"
     CDS             complement(2407..2583)
                     /locus_tag="ACJJDE_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541395.1"
                     /translation="MSGYVQFLGTDSKGQSKFIFVGTNENGSITTIHTKSGKDFWRTL
                     NNNPKNKTIYPKAR"
     gene            complement(2614..3531)
                     /locus_tag="ACJJDE_001486"
     CDS             complement(2614..3531)
                     /locus_tag="ACJJDE_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7541396.1"
                     /translation="MEKAEHLNSSRFVNLVKSGGGSYVEGSYRFDTLSNGISIHGGTV
                     TARCDFCSSRLAEPYVSFVLLLEGSLDFGINRRRFQIDADGGKIVLIAVGEEVLFSRY
                     LYRGGKTVKMTIKGMEQWLLRPEYARFAPLLYREPVRIWNLSPNLRGSAASCLKAVPK
                     GHLGETLRREADVLRLLSDLWDTVSDGIGPAAGQTAEADAMPSEDFNRTLNAAFADGA
                     HQVNRLTDALNISERTLQRRMRDHFGITASEWLHHKQMQHALYLLQNGGKSIGETAYL
                     CGYRHVSSFTQAFRQYFGSTPAETKKENR"
     gene            3703..4503
                     /locus_tag="ACJJDE_001487"
     CDS             3703..4503
                     /locus_tag="ACJJDE_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7541397.1"
                     /translation="MSPSPFIEMKDVAFAYGDRPILKNINFSIPQGNFAAVMGGSGSG
                     KTTLMRLITGQIRPQSGQVLIEGRDLAGFSADELYEHRRRMGVLFQHGALFTDLSVFD
                     NIAFPMRELTRLPEAVIRDLVLLKLNAVGLRGVENLMPSELSGGMSRRVALARTIALD
                     PEIMLYDEPFTGLDPISLGVIAHLISRVNKALRSTSIMVTHDIEKSLEIVDQVIFLAH
                     GEIMFSGSPQEMRELDSPWVRQFVGGLADGPVAYRYPAQTSLQQDLLG"
     gene            4552..5328
                     /gene="mlaE"
                     /locus_tag="ACJJDE_001488"
     CDS             4552..5328
                     /gene="mlaE"
                     /locus_tag="ACJJDE_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HGG7541398.1"
                     /translation="MNFIRSVGAKTLGLIQSLGSITLFLLNILAKSGTAFVRPRLSVR
                     QVYFAGVLSVLIVAVSGLFVGMVLGLQGYTQLSKFKSADILGYMVAASLLRELGPVLA
                     AILFASSAGGAMTSEIGLMKTTEQLEAMNVMAVNPVARVVAPRFWAGVFSMPLLASIF
                     NVAGIFGAYLVGVTWLGLDSGIFWSQMQNNITIHYDVINGLIKSAAFGVAVTLIAVHQ
                     GFHCVPTSEGILRASTRTVVSSALTILAVDFILTAWMFTD"
     gene            5379..5873
                     /gene="mlaD"
                     /locus_tag="ACJJDE_001489"
     CDS             5379..5873
                     /gene="mlaD"
                     /locus_tag="ACJJDE_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015914 - phospholipid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HGG7541399.1"
                     /translation="MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVY
                     ADFGDIGGLKVNAPVKSAGVLVGRVGAIGLDPKSYQARVRLDLDGKYQFSSDVSAQIL
                     TSGLLGEQYIGLQQGGDTENLAAGDTISVTSSAMVLENLIGKFMTSFAEKNADGGNAE
                     KAAE"
     gene            5910..6500
                     /locus_tag="ACJJDE_001490"
     CDS             5910..6500
                     /locus_tag="ACJJDE_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HGG7541400.1"
                     /translation="MKKSSLISALGIGILSIGMAFAAPADAVNQIRQNATQVLSILKS
                     GDANTARQKAEAYAIPYFDFQRMTALAVGNPWRTASDAQKQALAKEFQTLLIRTYSGT
                     MLKLKNANVNVKDNPIVNKGGKEIIVRAEVGVPGQKPVNMDFTTYQSGGKYRTYNVAI
                     EGASLVTVYRNQFGEIIKAKGVDGLIAELKAKNGSK"
     gene            6557..6835
                     /locus_tag="ACJJDE_001491"
     CDS             6557..6835
                     /locus_tag="ACJJDE_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HGG7541401.1"
                     /translation="MHTELNNGTLHISGDVTVKTLTAAAFTRFRQQCRLKDTRAVDLS
                     GVGRADSACVSLLLEVLRGCKGSVRLTGIPESVRALSELYEIKDWLKS"
     gene            6832..7659
                     /locus_tag="ACJJDE_001492"
     CDS             6832..7659
                     /locus_tag="ACJJDE_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ family lipoprotein"
                     /protein_id="HGG7541402.1"
                     /translation="MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQAD
                     RYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGIN
                     TTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
                     SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRA
                     RQTGATPAEGTEDNIDIDELVESAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP"
     gene            7784..8146
                     /locus_tag="ACJJDE_001493"
     CDS             7784..8146
                     /locus_tag="ACJJDE_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VacJ"
                     /protein_id="HGG7541403.1"
                     /translation="MYEVNRSVFVLIPLEPFWNWLQTLPGNHLDGLTLEDIQADANSY
                     LVRPCETADEVWDEIEARFEDIFAAELADWCEDEREWPALDADIFNEWFDIQLSTVIT
                     DLEHEPLAREAFQPINLN"
     gene            8146..8529
                     /locus_tag="ACJJDE_001494"
     CDS             8146..8529
                     /locus_tag="ACJJDE_001494"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7541404.1"
                     /translation="MKLTVRNYHLDGYGHVNNARYLEFFEEARWAFFEERGLLHELAG
                     LILIVARIDIRYSRPAVEGDVLQFSCRLKTPGTRRIVLTQTITLPNGKTAAEADITLM
                     PVHAATQRTVSLPATLARALEALSE"
     gene            8526..9014
                     /locus_tag="ACJJDE_001495"
     CDS             8526..9014
                     /locus_tag="ACJJDE_001495"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin family protein"
                     /protein_id="HGG7541405.1"
                     /translation="MKKILTAAVVALIGILLAIVLIPDSKTAPAFSLPDLHGKTVSNA
                     DLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVK
                     DYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAL
                     AQ"
     gene            complement(9095..9223)
                     /locus_tag="ACJJDE_001496"
     CDS             complement(9095..9223)
                     /locus_tag="ACJJDE_001496"
                     /inference="COORDINATES: protein motif:HMM:NF025953.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
                     /protein_id="HGG7541406.1"
                     /translation="MAGVTVGRGSVVGAGAVVTKDIPPYSLAAGNPAVVKKNLPEG"
     gene            complement(9229..9609)
                     /locus_tag="ACJJDE_001497"
     CDS             complement(9229..9609)
                     /locus_tag="ACJJDE_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-o"
                     /protein_id="HGG7541407.1"
                     /translation="MGSKFFFLLLRFAGSVLPPSHMRGIGIVGRRVRGFLARRVSPHI
                     GRGVNIERGAYVFPDTVLGDGSGIGANCEICRGPVVGKNVMMEPECLFYSNNHKFDRS
                     KNALRATRKSVRLRWRTMSGRGAG"
BASE COUNT         2221 a         2684 c         2430 g         2294 t
ORIGIN      
        1 aagtggcggg aatgacggtt cgggcattcc ttaaatcacc cgtgtatcgc tgtaaatctt
       61 agagatggcg gaatatagcg gattaacaaa aaccagtacg gcgttgcctc gccttagctc
      121 aaagagaacg attctctaag gtgctgaagc accgagtgaa tcggttccgt actatctgta
      181 ctgtctgcgg cttcgtttaa atttaatccg ctatacaaag acaaaaacat cgacctcggt
      241 catgactgat tgccggtgaa actgtaaaaa tgccgtctga acctgaaaac gggttcagac
      301 ggcattttct atcggggttt taaagcggca ttaaatgtcg gtttccagat aaacgacttg
      361 ggtttgcaga tattcttcca aaccgtgttt gccgtccgcg ccgccgatgc cggatttttt
      421 ccagcccgcg tggaagcctt gcatggcttc aaagttttcg cggttgatgt aggtttcgcc
      481 gaattgcagg cggcgggtaa cgtagaaggc ttcgtttaaa ttagtcgtat aaacagaact
      541 ggtcagacca aactcgcaat cgttagccag tgcgatgact tggtcaagcg tgtcgaaagc
      601 ggaaacgggc agcacggggc cgaaggtttc ttctttcata atgtccatac tgttgtcggt
      661 gtcggtcagc agggtcggct cgaagaaata accgcgtcct tcggcgcgtt tgccgccgca
      721 gaccagtttc gcaccttgtt tgactgcccg ttccactttt tcggcaacgg ctttgacggc
      781 gcgctcttca atcagcggac ccatttccag cgcgcctgct tcggcttcgg cagggttgcc
      841 gtagcgcacg cctttcatgg cggcagtcat tttttcaatg aatgcgtctt tcagactgct
      901 gtggacataa acgcgctcgg cgcagttgca gatttgaccg gtgttgccga cacgcgaagc
      961 caagatggat ttcaccgcca aatccaaatc cgcgtctttc aaaacgatgg cgggggcttt
     1021 gccgccgagt tccaacgaaa ctttggtgat gttggcggaa gcggcttcca tcacttggcg
     1081 gcccgcttcg acggagccgg tcaggctgac catatcgact tgcggatggg cggacaaggc
     1141 attgccgatt tccgcacccg gaccgttcac cacgttgaac acgcctgcgg gcaatccgac
     1201 cgcatcgacg atttcggcga agatgtggca gttgatcggg gttacgctgc tgggtttgac
     1261 aacgatggtg ttgcccgtta ctaaggcggg acccattttg cgggcaatca ggaagaaagg
     1321 gaagttccac ggcaaaatgc cggcaattac gcccagcgga cgtttgaaca ataaaatgtt
     1381 ttcgcgcggg cggtcgcttt ggatgatttc gccttcgtaa cggcgcgccc attcggcttg
     1441 gtaatcgaga tagtcggcgg tgaacatcac ttccacgcgc gccaagtctt tggttttgcc
     1501 gccttcggca acgatggtgt cggtcagctc gtcggcgcgt tcgcgtatgc cttgggcgat
     1561 tttgcgcaaa tacgcgccgc gttcgaccgc aggcagacgc tcccaagccg gttgcgccgc
     1621 acgcgccgcc gctacggcgc ggtcaacgtc cgccctgccg cctttgggtt cgcgggcgat
     1681 ggcctcttcg gtggacgggt tcaatacgtc gcgccattcg ccgttgaaat cgttttcaaa
     1741 gcgtccgttg atgtacatgg ccaattgttt catttcgggt tctccagttt tgtagtcaga
     1801 tgtagtttta gtttattccc aaataaatta ccgtacaagt ttcttttgaa atgtttagac
     1861 gagaagctac tatgtctgca tattgttctg ctaatttata ttcactcgaa tgcaactgcc
     1921 gattattcca atctgcattc gcaccagtaa aagccccagc attgccgcct gtggcataac
     1981 caatcgctaa actgccaacg gtatccacaa caggtttcag gctgcctgaa tttctctaat
     2041 aaatgaaaca cttattctat caaccgttaa tgtaaccaaa caattatcaa gataagagta
     2101 gtttattaaa tactcatctt cttcaaattg tatattttgt agggttagat gattattttt
     2161 taattctgcc gttatttcat acttgaaact atcatctatt tttctaaatc caatatttga
     2221 agttgattta tccagtatgt aatcattaaa gatttcatag gataattcca cttcataaaa
     2281 ttgattttca aatattttga atgggcagta cgatataaaa caatgtagtt cataaccatt
     2341 tatttcaatc aatactgcct cttcaatggt gttatctaac tttttgattt tacatttata
     2401 taacatttat cttgcctttg gataaattgt tttgtttttt ggattgttat tcaaagttct
     2461 ccaaaagtct tttcctgatt ttgtatgtat cgtggtaata ctaccatttt cattggttcc
     2521 aacaaaaata aatttagatt gacctttgga atcagtaccc aaaaactgaa catatccaga
     2581 catgcggatt tcgggtttta aatcaaatgc ggcttatcgg ttttcttttt tggtttccgc
     2641 aggcgtgctg ccgaaatatt gcctgaatgc ctgagtaaag ctggaaacgt ggcggtagcc
     2701 gcacaaatac gcggtttcgc ctatgctttt gcccccgttt tgcaacaggt agagcgcgtg
     2761 ctgcatttgt ttgtggtgca gccactcgct tgcggtaata ccgaaatggt cgcgcatacg
     2821 gcgttgcagc gtcctttcac tgatgttcag cgcgtctgtc agccggttga cttggtgtgc
     2881 gccgtcggca aacgcggcat ttagggtgcg gttgaagtct tcagacggca tagcgtctgc
     2941 ttccgccgtt tgccccgccg ccggcccgat gccgtctgaa accgtgtccc acaagtccga
     3001 cagcagccgc aaaacgtccg cctcgcggcg caatgtttcg cccaaatgcc cctttgggac
     3061 agctttcagg caggatgccg ccgagccgcg caggtttggg gacaaattcc atattctgac
     3121 cggttcgcgg taaagcaggg gtgcgaaacg cgcatactcc ggacgcagca gccattgttc
     3181 cataccttta atggtcattt tgaccgtttt gccgcctcgg taaagatagc ggctgaacag
     3241 gacctcttcc ccgacagcaa ttaggacgat cttgccgcca tccgcatcga tttggaagcg
     3301 gcggcggttg atgccgaagt ccaaactgcc ttccagcaag agcacgaacg acacataagg
     3361 ttcggcgagg cggctgctgc aaaaatcgca ccgtgccgtt accgtgccgc cgtggatgga
     3421 aatgccgttg gacaaagtat cgaaacggta gctgccctcc acatagctgc cgccgccgct
     3481 tttgaccaga ttgacgaacc ggctgctgtt caaatgttct gctttttcca tagttttctg
     3541 ataaaggtta tcatttgaaa gataacattt ttcgccacag caaacaatcc gccgccacaa
     3601 cggcattttc acaacattta ccgtccgtat gccgtctgaa aattgcccgt cttcccgata
     3661 agccttaaaa tacacgccgt caaacctacc gtccgtccgt acatgagccc atcccccttt
     3721 atcgaaatga aagacgtcgc cttcgcgtat ggcgaccgcc cgattctgaa gaacatcaat
     3781 ttcagcattc cgcaaggcaa ttttgctgcc gtaatgggcg gttcgggcag cggcaaaacc
     3841 acgctgatgc gactgattac aggacagatt cgtccgcagt ccgggcaggt tttgattgaa
     3901 ggacgggatt tggcgggctt ttcggctgac gagttgtatg aacaccgccg ccgtatgggc
     3961 gtattgttcc aacacggcgc gctgtttacc gatttgtctg tatttgacaa tattgctttt
     4021 ccgatgcgcg aactgacgcg cctgccggaa gcggtgattc gagatttggt tttgttgaaa
     4081 ctgaacgcgg tcgggctgcg cggcgtggaa aacctgatgc cgtccgagtt gtccggcggg
     4141 atgtcgcgcc gcgtcgcgct tgcccgcaca atcgcgctcg atcccgaaat tatgttgtac
     4201 gacgagccgt ttaccggtct cgatccgatt tccttgggcg tgattgccca cttgatcagc
     4261 cgcgtcaaca aggctttgcg ttcgaccagt attatggtca cgcacgacat tgaaaaatct
     4321 ttggaaatcg tcgatcaggt gattttcttg gcgcacggcg aaattatgtt ctccggctcg
     4381 ccgcaggaaa tgcgcgaact ggattcgcct tgggtgcgcc agtttgtcgg cgggctggca
     4441 gacggccccg tggcataccg ttatccggcg caaacgtcgt tgcagcagga tttgctcggg
     4501 taaattgagc cggtgccgtc tgaaaccgtt gaactttaca tatagaaatt tatgaatttt
     4561 atccgttccg tcggggcgaa aaccctcggc cttattcaat ccctcggcag tattacgctg
     4621 tttctgctga acattctggc gaagtccggt acggctttcg tccgtccgcg cctgagcgtg
     4681 cgccaagtgt attttgccgg cgtgctgtcg gtgctgattg ttgccgtttc ggggctgttc
     4741 gtcggcatgg tcttgggttt gcagggctat acgcagttgt cgaaattcaa atccgccgat
     4801 attttgggct atatggttgc ggcttcgctg ttgcgcgaac tgggtccggt gttggcggcg
     4861 attctgtttg ccagcagcgc gggcggtgcg atgaccagcg aaatcggttt gatgaaaacg
     4921 accgaacagc tcgaagcgat gaacgtgatg gcggtaaacc ccgtcgcccg agtggttgcg
     4981 ccgcgctttt gggcgggcgt gttttccatg ccgcttttgg cttcgatttt caacgtggcg
     5041 ggtattttcg gcgcgtattt ggtcggtgta acctggctgg gcttggacag cggtattttc
     5101 tggtcgcaaa tgcagaacaa tatcacgata cattacgatg taatcaacgg tctgattaaa
     5161 tccgccgcgt tcggcgtggc ggtaacgctg attgccgtgc atcagggctt ccattgcgtc
     5221 ccgacttcgg aaggcatttt gcgcgccagc acgcgcacgg tggtttcgtc cgccctgacg
     5281 attttggcgg tcgattttat attgaccgcg tggatgttta cagattgaca ggccgtctga
     5341 agacgaaacg cggaacatcg gatattcaag gaactttaat gaaaaagaac atattggaat
     5401 tttgggtcgg actgttcgtc ctgattggcg cggcggcggt tgcctttctc gctttccgcg
     5461 tggccggcgg tgcggcgttc ggcggttcgg acaaaaccta cgccgtttat gccgatttcg
     5521 gcgacatcgg cggtttgaag gtcaatgccc ccgtcaaatc cgcaggcgta ttggtcgggc
     5581 gcgtcggcgc tatcggactt gacccgaaat cctatcaggc gagggtgcgc ctcgatttgg
     5641 acggcaagta tcagttcagc agcgacgttt ccgcgcaaat cctgacttcg ggacttttgg
     5701 gcgagcagta catcgggctg cagcagggcg gcgacacgga aaaccttgct gccggcgaca
     5761 ccatctccgt aaccagttct gcaatggttc tggaaaacct tatcggcaaa ttcatgacga
     5821 gttttgccga gaaaaatgcc gacggcggca atgcggaaaa agccgccgaa taaacgtatg
     5881 ccatcatatt caaactagga cacttaatca tgaaaaaatc ctccctcatc agcgcattgg
     5941 gcatcggtat tttgagcatc ggcatggcat ttgccgctcc tgccgacgcg gtaaaccaaa
     6001 tccgtcaaaa cgccactcaa gtattgagca tcttaaaaag cggtgatgcc aacaccgccc
     6061 gccaaaaagc cgaagcctat gcgattccct atttcgattt ccaacgtatg accgcattgg
     6121 cggtcggcaa cccttggcgc accgcgtccg acgcgcaaaa acaagcgttg gccaaagaat
     6181 ttcaaaccct gctgatccgc acctattccg gcacgatgct gaaattaaaa aacgccaacg
     6241 tcaacgtcaa agacaatccc atcgtcaata aaggcggcaa agaaatcatc gtccgcgccg
     6301 aagtcggcgt acccgggcaa aaacccgtca acatggactt caccacctac caaagcggtg
     6361 gtaaataccg tacctacaac gtcgccatcg aaggcgcgag cctggttacc gtgtaccgca
     6421 accaattcgg cgaaatcatc aaagcgaaag gcgtggacgg actgattgcc gagttgaagg
     6481 ctaaaaacgg cagcaagtaa tccataagcc atgccgccag actgaagatg gcatggattt
     6541 tttcctaccg aacactatgc atacagaact caacaacgga acactgcaca tcagcggcga
     6601 cgtaaccgtc aaaaccctga ccgccgccgc ctttacccgc ttcagacagc aatgtcgtct
     6661 gaaagacacc cgcgcggttg atttgagcgg cgtcggacgc gccgattccg cctgcgtgtc
     6721 gctgctgctc gaagtgctgc gcggttgcaa aggcagcgtc aggctgaccg gcattcccga
     6781 atccgtgcgc gcgctgtccg aactgtacga aatcaaagac tggctgaaat catgaaaaaa
     6841 accgcctatg ccttcctcct gctgatcggg ttcgcttccg cccctgcatt tgccgaaacc
     6901 cgccccgccg acccttatga aggctacaac cgcgccgttt tcaaattcaa cgaccaagcc
     6961 gaccgctaca ttttcgcccc tgccgcgcgc ggctaccgca aagttgcgcc gaaacccgtc
     7021 cgcgccggcg tgtccaattt ttttaacaac ctgtgcgacg tggtcagctt cggcagcaat
     7081 atcttgcgct tggacatcaa acgcgcaagc gaagaccttg tccgcgtcgg catcaacacc
     7141 actttcggtt tgggcgggct tatcgacatc gccggcgcgg gcggcattcc cgacaataaa
     7201 aacaccttgg gcgacacgtt tgcttcgtgg ggatggaaaa acagcaatta tttcgtgttg
     7261 cccgtcttag ggccgtccac cgtccgcgac gcgctcggca cgggtattac ctccgtttat
     7321 tcgcccaaga atatcgtctt ccgcacccct gtcggacgct ggggcacgac tgccgtatcc
     7381 gccgtcagta cgcgcgaagg tctgctcgat ttgaccgaca gtctggacga agccgccatc
     7441 gacaaataca gctacacgcg cgacctctat atgaaagtcc gtgcgcggca gaccggtgca
     7501 acacctgccg aaggtacgga agataacatc gacatcgacg aattggtcga aagtgccgaa
     7561 accggcgcgg cggaaactgc cgttcaagaa gattccgtat ccgaaacaca ggcagaagca
     7621 gcaggggaag ccgaaacgca acctggaaca caaccttaaa gccatgccgt ctgaaaatcc
     7681 gtgttcggac ggcattccct tctgtcggaa cggacagtcc gaaaccacag attgggctat
     7741 aatctctttt ttgcgcatac cgcgcgacag caaaggaaaa accatgtacg aagtcaaccg
     7801 cagcgtattc gtcctcatcc ctttagaacc tttttggaac tggctgcaaa ccctgccggg
     7861 caaccacctc gacggactga ctcttgaaga catccaagcc gacgccaatt cctaccttgt
     7921 ccgcccgtgc gaaaccgccg acgaagtatg ggacgaaatc gaagcccgtt ttgaagacat
     7981 tttcgccgcc gaacttgccg actggtgcga agacgaacgc gagtggcctg cgctcgatgc
     8041 cgacattttc aacgaatggt tcgacatcca gctttctacc gtcatcaccg acctcgaaca
     8101 cgaaccgctt gcccgcgaag ccttccaacc catcaacctg aactgatgaa gctgaccgtc
     8161 cgcaactacc atctcgacgg ctacggccat gtcaacaatg cgcgctacct cgaatttttc
     8221 gaagaagcgc gctgggcgtt ttttgaagaa cgcggactgc tgcacgagtt ggcaggcctc
     8281 atactgattg tcgcccgcat cgacatccga tacagccgcc ccgccgtcga aggcgacgta
     8341 ttgcagtttt catgccgcct gaaaaccccc ggcacgcgcc gtattgtgct gacccagacg
     8401 attacactgc caaacggcaa aaccgccgca gaagccgaca tcaccctgat gcccgtccac
     8461 gccgccacac aacgcaccgt cagcctgccc gccacccttg cccgcgcatt ggaagccttg
     8521 tccgaatgaa aaaaatactc accgccgccg tcgtcgcact gatcggcatc ctccttgcca
     8581 tcgtcctcat ccccgacagc aaaaccgcgc ccgccttctc cctgcccgac ctgcacggaa
     8641 aaaccgtttc caacgccgac ctgcaaggca aagtaaccct gattaatttt tggtttccct
     8701 cctgtccggg ttgtgtgagc gaaatgccca aaatcattaa aacggcaaat gactataaaa
     8761 acaaaaactt ccaagtcctt gccgtcgccc agcccatcga tccgatagaa agcgtccgcc
     8821 aatatgtcaa agactacggt ttgccgttta ccgtcatgta tgatgcggac aaagctgtcg
     8881 gacaggcgtt cggcacacag gtttatccga cttccgtcct tatcggcaaa aaaggcgaaa
     8941 tcctcaaaac ttatgtcggc gaacccgatt tcggcaaact ctaccaagaa atcgataccg
     9001 cgctggcgca atagcgatgc cgtctgaagc gcaaaaaaca gaaacgatgt tcctgttttt
     9061 tcagatcatc cgccccgaca cgttcagacg gcattcaacc ttccggcaga ttctttttca
     9121 ccactgccgg attgcctgcc gccaaagagt agggcggaat gtcttttgta accaccgcgc
     9181 ctgcgcccac gaccgaaccg cgtccgacgg ttacgcccgc cattacaatc accctgcgcc
     9241 ccggccagac atcgtcctcc aacgtaatcg gacggatttc cgtgtagccc tcaaagcgtt
     9301 ttttgaacgg tcaaacttgt ggttatttga ataaaacaga cattccggct ccatcatcac
     9361 atttttgccg accaccggcc cacggcagat ttcacagttt gccccgatgc ccgagccgtc
     9421 gcccaaaacc gtatccggaa acacatacgc cccgcgttcg atattgaccc cgcgtccgat
     9481 atgcggagaa acccgccgcg ccaaaaaacc gcgtacccgt ctgccgacga tgccgatgcc
     9541 gcgcatatgt gacggcggca acaccgaacc ggcaaaacgc agcagcagga aaaagaattt
     9601 tgatcccatc aaacctccct caaaagaac
//
LOCUS       DBBZXU010000072         9387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.072, whole genome shotgun sequence.
ACCESSION   DBBZXU010000072 DBBZXU010000000
VERSION     DBBZXU010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.072"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            90..299
                     /locus_tag="ACJJDE_001498"
     CDS             90..299
                     /locus_tag="ACJJDE_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase family protein"
                     /protein_id="HGG7541408.1"
                     /translation="MPYVNIKVTGGKEAPTAAQKAELIGGVTELLARVLGKNPETTVV
                     VIDEVDTDNWGIGGKSVSERRKEGR"
     gene            388..1602
                     /locus_tag="ACJJDE_001499"
     CDS             388..1602
                     /locus_tag="ACJJDE_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HGG7541409.1"
                     /translation="MDKFPKSAKLDHVCYDIRGPVHKKALQLEEEGNKILKLNIGNPA
                     PFGFEAPDEILVDVIRNLPTSQGYCDSKGLYSARKAIVHYYQTKGLRDITVNDVYIGN
                     GVSELITMSMQALLNDGDEILIPAPDYPLWTAAATLAGGTVRHYLCDEENGWFPNLAD
                     MEAKITPKTKAIVVINPNNPTGAVYSREILLEIAELARKHGLIIFADEIYDKILYDGA
                     VHHHIAALAPDLLTVTFNGLSKAYRVAGFRQGWMVLNGPKHHAKGYIEGLDMLSSMRL
                     CANTPMQHAIQTALGGYQSINEFILPGGRLLEQRNRAWELVNQIPGVSCVKPMGAMYM
                     FPKIDTEMYRIHDDMKFVYDLLVREKVLLVQGTGFNWIKPDHFRIVTLPYVHQIEEAM
                     GRLARFLQTYRQ"
     gene            complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="ACJJDE_001500"
     CDS             complement(1689..4268)
                     /gene="clpB"
                     /locus_tag="ACJJDE_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HGG7541410.1"
                     /translation="MRYDKLTAKFQQALAEAQSLALAADGSYLEAGFVLKALLDDQNS
                     GAAALLAHAGVNVPQVKQRLQQHLNSLPKVSGQGGDIMPSRELQAVLNLMDKAATKRG
                     DAYIASELFLLALVQQNDATGKILKEAGATEQNINAAIDAVRGGQNVNDANAEDQRDA
                     LKKYTLDLTQRARDGKLDPVIGRDDEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERLKGVLNDLAKDDGNTLIF
                     IDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEYRQYIEKDAALERRFQ
                     KVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDRYITDRFLPDKAID
                     LIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKKRLELIDEEING
                     LQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALASKLMYEDLEH
                     LEKQRAAAERADTDSTKPANKLLRNNVGAEEIAEVVSRMTGIPVSKMMEGERDKLLKM
                     EEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTELCKALAG
                     FLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSVILLDE
                     VEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDYEAV
                     KEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLTV
                     SDAALDIIAKAGFDPIYGARPLKRAIQSEIENPLAKALLAGNYAPESEIRVEADGDRL
                     KFA"
     gene            4529..5539
                     /gene="trpS"
                     /locus_tag="ACJJDE_001501"
     CDS             4529..5539
                     /gene="trpS"
                     /locus_tag="ACJJDE_001501"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HGG7541411.1"
                     /translation="MSKKRVLTGVTTTGIPHLGNYVGAIRPAVRAAQNPDTESFLFLA
                     DYHGIIKCHEPEMIHQSTQAVAATWLACGLDPERTTFYRQSDIPEVMELNWILTCITA
                     KGLMNRAHAYKAAVQANAENGQEDPDFGVEMGLFSYPILMTADILMFNANEVPVGRDQ
                     IQHVEMARDIAGRFNHRFRELFTLPEVKIDENVELLVGLDGRKMSKSYGNTIPLWEND
                     KKTQKSVNKIITNMKEPGEPKQPDESPLFEIYKAFSTPSETVEFTKMLADGLAWGEAK
                     KLLAAKINAELAEPRERYNELTADPSQIEEILQAGAQKARKEARELLDKVRDAVGIRP
                     LK"
     gene            5545..5886
                     /locus_tag="ACJJDE_001502"
     CDS             5545..5886
                     /locus_tag="ACJJDE_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541412.1"
                     /translation="MPSEPLKGLPEQNVVRLTGKHPNDLEAVVGKCMETDGKGAPSGW
                     AANGVCHTLFAKLVGNIAEDGGKLTDYLISHSALQPYQAGKSGYAAVQNGRYVLEIDS
                     EGAFYFRRRHY"
     gene            6208..6531
                     /locus_tag="ACJJDE_001503"
     CDS             6208..6531
                     /locus_tag="ACJJDE_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003674689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541413.1"
                     /translation="MKKLLIAAMMAAALAACSQEAKQEVKEAVQAVESDVKDTAASAA
                     ESAASAVEEAKDQVKDAAADAKASAEEAVTEAKEAVTEAAKDTLNKAADATQEAADKM
                     KDAAK"
     gene            complement(6740..8248)
                     /gene="ppx"
                     /locus_tag="ACJJDE_001504"
     CDS             complement(6740..8248)
                     /gene="ppx"
                     /locus_tag="ACJJDE_001504"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HGG7541414.1"
                     /translation="MTTHPANVLASVDLGSNSFRLQICENNNGQLKVIDSFKQMVRFA
                     AGLDEQKNLSAASQEQALDCLAKFGERLRGFRPEQVRAVATNTFRVAKNIADFLPKAE
                     AALGFPIEIIAGREEARLIYTGVIHTLPPGGGKMLVIDIGGGSTEFVIGSTLNPDITE
                     SLPLGCVTYSLRFFQNKITAKDFQSAISAARNEIQRISKNMRREGWDFAVGTSGSAKS
                     IRDVLAAEMPQEADITYKGMRALAERIIEAGSVKKAKFENLKPERIEVFAGGLAVMMA
                     AFEEMKLDRMTVTEAALRDGVFYDLIGRGLNEDMRGQTVAEFQHRYHVSLNQAKRTAE
                     TAQTFMDSLCHAKNVTVQELALWQQYLGRAAALHEIGLDIAHTGYHKHSAYILENADM
                     PGFSRKEQTILAQLVIGHRGDMKKMSGIIGTNEMLWYAVLSLRLAALFCRSRQDLSFP
                     KNMQLRTDTESCGFILRIDREWLERHPLIADALEYESVQWQKINMPFKVEAV"
     gene            complement(8364..9204)
                     /locus_tag="ACJJDE_001505"
                     /pseudo
     CDS             complement(8364..9204)
                     /locus_tag="ACJJDE_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714481.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
BASE COUNT         2164 a         2446 c         2477 g         2300 t
ORIGIN      
        1 cgatttgaat ttttcagaaa atgaagcgga cgtttgggcg gaggcaactt gtttgataag
       61 atagcaatat tttaaaacgg agaaagatca tgccttatgt caatattaaa gtaaccggcg
      121 gcaaggaagc accgactgcc gcgcaaaaag cggaactgat cggcggcgta accgaattgc
      181 tggcacgcgt gctgggcaaa aatcccgaaa caacggttgt cgtgattgac gaagtggata
      241 ccgataactg gggaataggc ggcaaaagcg tcagcgaacg gcgcaaagag ggcaggtaaa
      301 aagcctgaaa atctcggttt gatgctttaa attccgcgtg aaaaagagta cattcccacc
      361 cattgcccaa aatttacgga acacatcatg gataaatttc ccaagtctgc aaagctcgat
      421 cacgtctgtt acgacatacg cgggccggtt cacaaaaaag cccttcagtt ggaagaggag
      481 ggcaataaaa tccttaaact caatatcggc aaccctgcgc cgttcggctt tgaagcccct
      541 gatgaaatct tggtcgatgt catccgcaac ctgccgactt cgcaaggcta ttgcgattct
      601 aaagggctgt attccgcccg caaagccatt gttcactact atcagaccaa aggtttgcgc
      661 gatattacgg taaacgatgt ctatatcggc aacggcgtgt ccgagctgat tacgatgtct
      721 atgcaggcat tgctcaacga cggcgacgaa atcctgattc ccgcgcccga ctaccctttg
      781 tggacggcgg cggcaacgct tgcgggcggt acggtacgcc attatctgtg cgacgaagaa
      841 aacggctggt tccccaacct tgccgatatg gaagccaaaa tcacgcccaa aaccaaagcc
      901 atcgtcgtca tcaatcccaa taatccgaca ggcgcggtgt acagcaggga aatcctgttg
      961 gaaatcgccg aactggcgcg caagcacggt ttgattattt tcgccgacga gatttacgat
     1021 aaaatccttt atgacggcgc ggttcaccac cacatcgccg cgcttgcccc cgaccttttg
     1081 acggtaacgt tcaacggttt gtccaaagcc taccgcgtcg ccggcttccg ccaaggctgg
     1141 atggtgctca acgggccgaa acatcatgca aaaggttaca tcgagggttt ggatatgctc
     1201 tcgtctatgc gcctgtgtgc caatacgccg atgcagcacg cgattcagac ggcattgggc
     1261 ggctatcaga gcatcaacga attcattttg cccggcggac ggcttttgga acagcgtaac
     1321 agggcgtggg aattggtcaa tcagataccc ggcgtatcct gcgtcaaacc gatgggcgcg
     1381 atgtatatgt tcccaaaaat cgataccgaa atgtaccgta tccacgatga catgaaattc
     1441 gtttacgatt tgctggtgcg cgaaaaagtc ttgctggtac agggaacggg gtttaattgg
     1501 attaaacctg accatttccg cattgtcacg ctgccttacg tccatcagat tgaagaggcg
     1561 atgggcaggt tggcaagatt cctgcaaacc taccgccaat aaggggacgg tttgtctgcc
     1621 gaggataaaa aatgccgtct gaaacggaga ttcccgtttc agacggcatt ttcaacagca
     1681 ggaacgaatc aggcaaattt cagtctgtcg ccgtcggctt ctaccctgat ttcgctttcg
     1741 ggcgcatagt ttccggcaag cagggctttt gccagcgggt tttcgatttc cgactggatg
     1801 gcgcgtttga gcggacgtgc gccgtaaatc gggtcgaaac cggctttggc gatgatgtcc
     1861 agagcggcat cggaaacagt caggcggagg ttttgttttt ccaaacgttt ttccaagcct
     1921 ttgagctgga ttttcgcaat gttgcggata ttatcctgat ccagtccgtg gaacacgacc
     1981 acttcgtcga tgcggttgat catttcagga cggaaatgct ctttcacatc ctccatcaca
     2041 acttctttca cggcttcgta gtcctgcgtg cccatttgtt ggatgtgctg gctgccaatg
     2101 ttggaagtca tcacaatcac ggtgttttta aaatctaccg tcctgccttg tccgtcggtc
     2161 aaacgaccgt catccaaaac ttgcagcagg atattgaaca cgtcgggatg ggctttttcc
     2221 acttcgtcca aaagaatcac gctgtacggt ttgcggcgga cttgctcagt caggtagccg
     2281 ccttcttcgt agccgacata gcccggaggc gcgccgatta agcgggcaac ggcgtgtttt
     2341 tccatatatt cggacatatc gatacgaatc agatgatctt cactgtcaaa caggaagcct
     2401 gccaatgcct tacacaattc ggtcttaccc acgccggtcg ggcctaagaa caggaagctg
     2461 ccgtaaggtt tgttcggatc ggcaagaccg gaacggctgc ggcggatagc gtcggacacg
     2521 gcacgcacgg cttcatcttg accgaccacg cggcggtgca atacttcttc catcttcagc
     2581 agtttgtcgc gttcgccttc catcattttg gacacgggaa taccggtcat acgggaaaca
     2641 acttctgcga tttcctccgc gccgacatta ttacgcaaga gtttgtttgc cggttttgtg
     2701 ctgtccgtat ctgcccgttc ggcggctgca cgctgttttt ccaaatgctc caaatcttca
     2761 tacatcaatt ttgaagccag tgccaaatcg ccttgccgtt ttgcctgttc gattttaatt
     2821 ttgacttcgt caatttgttt cttaatatta gcagcaccgt ctgaaattgc tttttcggct
     2881 ttccagattt cgtctaaatc ggcgtattct ttttgcagac cgttgatttc ctcgtctatc
     2941 agttccaaac gttttttgct ggcatcgtct ttttcttttt caacgtgtgc cttttccatc
     3001 cgaagctgaa tcagacggcg gtcgattttg tccattgctt ccggcttggt ttctttttcc
     3061 atcttgacac ggctggcggc ttcatcaatc aaatcaatcg ctttgtcggg caggaagcgg
     3121 tcggtgatgt agcggtcgct caactccgct gcggcaacga tagcagggtc ggtaatatcg
     3181 ataccgtggt ggatttcata acgctcctgc aaaccgcgca agatggcgat ggtgtcttcc
     3241 acgctgggct cgccgaccaa tactttttgg aagcggcgtt cgagtgccgc gtctttttcg
     3301 atgtattggc ggtattcgtc caaggtggtc gcgccgatac agtgcagttc gccccgcgcc
     3361 aaggccggtt tcagcatatt gcccgcgtcc atcgcgccgt cggttttgcc cgcgccgacc
     3421 aaagtatgga tttcatcaat gaaaatcaga gtgttgccgt cgtctttcgc caaatcgttc
     3481 aacacgcctt tcaagcgttc ttcaaattcg ccacggtatt tcgcgccggc aatcaatgcc
     3541 gccaagtcca gaaccaaaag gcgtttgttg cgcagggatt cgggtacttc gccgttgacg
     3601 atgcgttgcg ccaagccttc gacaatggca gttttaccca cgcccggttc gccaatcagc
     3661 acggggttgt ttttggtgcg gcgttgcaat acctgaattg cacggcggat ttcgtcgtca
     3721 cgaccgataa cggggtcgag cttaccgtcg cgggcgcgtt gggtcaaatc gagcgtatat
     3781 tttttcagcg catcgcgttg gtcttcggca ttggcatcgt tcacgttttg tcctcctcgt
     3841 accgcatcga ttgcggcatt aatgttttgt tcggtcgcgc cggcttcttt caaaattttg
     3901 ccggttgcat cgttctgctg caccaaggcg agcaggaaaa gttcgctggc gatataggca
     3961 tcgccgcgtt tggttgctgc tttgtccatc aggttcaaca ccgcctgcaa ttcgcggctg
     4021 ggcataatgt cgccgccctg tccggatact ttcggcaggc tgttcaaatg ctgctgcaaa
     4081 cgctgtttca cctgcggcac gttcacgccc gcatgagcca agagcgcggc agcaccgctg
     4141 ttttggtcgt caagcagggc tttcagcaca aagcccgctt ccagatagct gccgtccgca
     4201 gccaacgcca aactctgagc ttctgcaagg gcctgttgga atttggcggt taatttgtcg
     4261 tatcgcattt ttgtttcctt ttcaaaatgt ccgctgtcga agcctatatg tgcataattg
     4321 tggataactc aagttctgtt ttctgttttt ctatatttaa ttcgatatat cattgaattt
     4381 aaagtatata aaaatgtata ataatgtgta taactatatc ttcttaatat ggaaaagtct
     4441 gttgtcggct ggatgtaggt ggcaaatcgg gtataatcgg cgcatctttt tccctttcag
     4501 acggcattga tgccgcaagg acatttttat gagcaaaaaa cgagttctga ccggcgtaac
     4561 caccaccggc atcccgcatc tgggcaacta cgtcggtgct atccgccccg ccgtccgcgc
     4621 ggcgcaaaac cctgataccg aatccttcct cttcctcgcc gattaccacg gtatcatcaa
     4681 atgccacgag ccggagatga ttcaccaatc cacccaagcc gttgccgcca cttggcttgc
     4741 ctgcggactc gaccccgagc gcaccacctt ctaccgccaa agcgacattc ccgaagtgat
     4801 ggaattgaac tggattctga cctgcatcac cgccaagggt ttgatgaacc gcgcccacgc
     4861 ctacaaagcc gccgtgcagg caaatgcgga aaacgggcag gaagaccccg atttcggcgt
     4921 ggaaatgggt ttgttcagtt atccgattct gatgactgcc gatattctga tgttcaacgc
     4981 caacgaagtc cccgtcgggc gcgaccaaat ccaacacgtc gaaatggcgc gcgacatcgc
     5041 cggccgcttc aatcaccgct tccgagaact cttcaccctg cccgaagtga aaatcgacga
     5101 aaacgtcgaa ctcttggtcg gtttggacgg acgcaaaatg tccaaatcct acggcaacac
     5161 cattccgctt tgggaaaacg acaaaaaaac ccaaaaatcg gtcaacaaaa tcatcaccaa
     5221 tatgaaagag ccgggcgagc cgaaacagcc cgacgaaagc ccattgtttg aaatctacaa
     5281 agccttctcc acgccgtctg aaacggtgga atttacgaaa atgcttgccg acggcctggc
     5341 ttggggcgag gcaaaaaaac ttttggcggc gaaaatcaac gccgaactcg ccgaaccgcg
     5401 cgaacgctac aacgagctga ccgccgaccc ttcgcaaatc gaagagattt tacaggcagg
     5461 tgcgcaaaaa gcgcgtaaag aagcacgcga attgttggac aaagtacgcg atgcggtcgg
     5521 catccgcccg ttgaaataaa cccgatgccg tccgaacctc ttaaaggctt gccggaacaa
     5581 aacgtcgtcc ggctgaccgg caagcatccc aacgacttgg aagccgtcgt cggcaaatgt
     5641 atggaaaccg acggaaaggg cgcgccttcg ggctgggcgg caaacggcgt gtgccatacc
     5701 ttgtttgcca aactggtggg caatatcgcc gaagacggcg gcaaactgac ggattacctg
     5761 atttcgcatt ccgccctgca accctatcag gcaggcaaaa gcggctatgc cgccgtgcag
     5821 aacggacgct atgtgctgga aatcgacagc gaaggggcgt tttatttccg ccgccgccat
     5881 tattgaggta ttcggacatc ccggaatata tttgggtttt tcaaaccctg cgggaaaaaa
     5941 gtccgcaccg tcgggaaact caaaaggagg gggatatgtg ttacaatttt ccgaactgtt
     6001 ttcataaaat agttttcgga cgtgtttcaa tatggcattg atgccgcctt attgttcgag
     6061 aaaaaaaacc tttatattta aatataatgg gttttaacta aacgggaaac cgttttctct
     6121 ccggccgatg ggcaaaatca gccgattgat ggaacacggt ccgattttta agcaaaacct
     6181 taatcaacaa ctcaagaagg ataagacatg aaaaaattat tgattgccgc aatgatggcg
     6241 gctgccttgg cagcttgttc gcaagaagcc aaacaggagg ttaaggaagc ggttcaagcc
     6301 gttgagtccg atgttaaaga cactgcggct tctgccgccg agtctgccgc ttctgccgtc
     6361 gaagaagcga aagaccaagt caaagatgct gcggctgatg caaaggcaag tgccgaggaa
     6421 gctgtaactg aagccaaaga agctgtaact gaagcagcta aagatacttt gaacaaagct
     6481 gccgacgcga ctcaggaagc ggcagacaaa atgaaagatg ccgccaaata atttgttgcc
     6541 ttggcaaaaa tgatgggatg ccgcctgccg gcaacccaaa cgaaaccgcc tgaagatttt
     6601 caggcggttt ttgggttatg tgccccttgt tttttacgcc tgcatgaccg ttccgagcag
     6661 atgtgccgcg catatcggga tgttgcggac aggcaaatgc cgtctggaca gggtttggac
     6721 ggcatttgtt ccgtaaggtt cagacggcct cgactttaaa cggcatattg attttttgcc
     6781 attggacgct ttcatattcc aatgcgtcgg caatcagggg gtggcgttcc agccattccc
     6841 tgtcaatacg caggatgaag ccgcagcttt ccgtatccgt gcgcaactgc atgtttttcg
     6901 ggaaagacag gtcttggcgc gaacggcaga acagtgcggc aaggcgcagc gacaaaacgg
     6961 cataccacaa catttcgttg gtgccgatga tgccgctcat ttttttcata tcgccgcgat
     7021 gaccgatgac cagttgggca agtatggtct gttctttgcg tgagaaaccc ggcatatcgg
     7081 cgttttcgag gatgtaggcg gaatgcttgt gatagccggt gtgggcgatg tccaaaccga
     7141 tttcgtgcag cgcggcggcg cgtccgagat actgttgcca caaggcaagc tcttgaaccg
     7201 taacattttt agcgtggcag aggctgtcca taaaggtttg cgcggtctcg gcggtgcgtt
     7261 tcgcctgatt gaggctgacg tggtagcggt gttggaactc ggcaaccgtt tgtccgcgca
     7321 tatcttcgtt taaaccgcgc ccgatcaaat cgtaaaacac gccgtcgcgc agggcggctt
     7381 cggttacggt catcctgtcg agtttcattt cttcaaacgc cgccatcatc acggcaagtc
     7441 cgccggcaaa aacttcgatg cgttccggtt tcaggttttc aaatttggcc tttttgaccg
     7501 aaccggcttc gatgatgcgt tcggcgaggg cgcgcatgcc tttgtaggta atgtccgcct
     7561 cttggggcat ttcggcggca agcacgtcgc ggatggattt tgccgaaccc gatgtgccga
     7621 cggcgaaatc ccaaccttcg cgcctcatat ttttgctgat gcgctggatt tcgttgcggg
     7681 cggcggaaat ggcagattgg aagtctttgg cggtgatttt gttttggaag aagcgcaggc
     7741 tgtaggttac gcagcccaag ggcaggcttt cagtaatgtc gggattcagc gtcgagccga
     7801 tgacaaattc tgtcgaaccg ccgccgatgt cgataaccag cattttgccg ccgcccgggg
     7861 ggagggtgtg gatcacgccg gtataaatca gccgcgcctc ttcgcgcccg gcgatgattt
     7921 cgatggggaa acccagtgcc gcttcggcct tgggaaggaa atctgcgatg tttttggcga
     7981 cgcggaatgt attggttgcc acggcgcgca cctgttcagg gcggaagccg cgcaggcgtt
     8041 cgccgaattt tgccaggcag tccaaagcct gttcttggga agcggcactc aggtttttct
     8101 gttcgtccag accggcggcg aagcgcacca tctgtttgaa cgaatcgata acttttaatt
     8161 gtccgttgtt gttttcgcaa atctggaggc ggaaactgtt ggaacccaaa tcgacggagg
     8221 cgaggacgtt tgcgggatgg gtggtcatgg tggataccgg tgggggaaaa acgcaatgtt
     8281 actctgacgg cgcaggcgtt gacaataaat gatgcggcgg tttttgattc tgcccacgga
     8341 tgttgccgac ggcatttttg cgcttatttg aaatcctttt ccacgctcat gaaaatctgc
     8401 gtgtttttgc gtgtgtaaaa acttttcata ttgctgtcga ttttcagata gcggaaattg
     8461 agttgcggcg taaagccctt ccaagagatt ttgtcgtgcc acaacgacag gtttgcctga
     8521 tattcgtggt ctttgcgcgg gaagcggtac acaatggtcc cgggtgcgtc aaacatcctg
     8581 cgggtatagc gcaggtttgc ccgcagaccc aagcccgccg tcgaacgttt tgactgcgcc
     8641 gacacgcaaa cccttgcgga cggaagcctg ttccgcctct ttcgtcatgt tgtgcgacca
     8701 gtccgcaccg ccgtaaagca gccagtcttt cggcgcggaa tacatcagcg tcgcgcccgc
     8761 cagcggcata tggctgtcgt atcgggcggc ggtgcggtct tcctgataac gcttccacat
     8821 attgcccacg ttcagcgtca gccgccagcg ttcgctcaag cgtcgggaga aatcggcatt
     8881 gaagccgccg acgaaattgt atcggctgcc gcctaagagg ttttgcccga taaacggcac
     8941 gatgccgaac gagcgcgtta ccgaacgatt tttatagccg agcgacaggc gcaggcactg
     9001 ttcgctgaaa tctttgttat cccaataatg cacgccgccg ccgctgatgc cgccgtagag
     9061 gaaatgatgc ccgcccgcat tgatttcgcg cgacacgcct aagccctagc gcaaaccgtg
     9121 tgccttttgc ggcaggctgt cggcggtttt cgtccagctt ctgcccgcaa attcaatcgt
     9181 ttttttggac gaagcgttgt ttatagcgga ttaacaaaaa tcaggacaag gcgacgaagc
     9241 tgcagacagt acagatagta cggaaccgat tcacttggtg cttcagcacc ttagagaatc
     9301 gttctcttcg agctaaggcg agacaacgcc gtaccggttt ttgttcatcc actataacag
     9361 caaccctgtc gccgtcattc ccgcaaa
//
LOCUS       DBBZXU010000073         9273 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.073, whole genome shotgun sequence.
ACCESSION   DBBZXU010000073 DBBZXU010000000
VERSION     DBBZXU010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9273)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9273)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9273
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.073"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            86..904
                     /gene="opc"
                     /locus_tag="ACJJDE_001506"
                     /gene_synonym="opcA"
     CDS             86..904
                     /gene="opc"
                     /locus_tag="ACJJDE_001506"
                     /gene_synonym="opcA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter adhesin Opc"
                     /protein_id="HGG7541415.1"
                     /translation="MKKTVFTYAMIALTGTAAAAQELQTANEFTVHTDLSSISSTRAF
                     LKEKHKAAKHIGVRADIPFDANQGIRLEAGFGRSKKNIINLETDENKLGKTKNVKLPT
                     GVPENRIDLYTGYTYTQTLSDSLNFRVGAGLGFESSKDSIKTTKHTLHSSRQSWLAKV
                     HADLLSQLGNGWYINPWSEVKFDLNSRYKLNTGVTNLKKDINQKTNGWGFGLGANIGK
                     KLGESASIEAGPFYKQRTYKESGEFSVTTTSGDVSLTIPKTSIREYGLRVGIKF"
     gene            1068..1712
                     /locus_tag="ACJJDE_001507"
     CDS             1068..1712
                     /locus_tag="ACJJDE_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HGG7541416.1"
                     /translation="MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVT
                     PLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDS
                     KIFRREYLDKTRRFYEKHGGKTIIIARFVPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
                     FLWVILFSYAGYFFANFPIVKNNLGLVMGGIIIISILPGAVEIARAKLAVKSKR"
     gene            1731..3641
                     /locus_tag="ACJJDE_001508"
     CDS             1731..3641
                     /locus_tag="ACJJDE_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7541417.1"
                     /translation="MNILSVENASFAVGHVALLDKTSFQLDSGEKIGLIGRNGAGKSS
                     FLKILAGLQKLDDGQIIVQNNLKIVYVPQESFFDKDATVFDTVAEGLGKIRDLLRRYH
                     RVGHELENGSGEALLKELNELQLEIEAKDGWKLDAAVKQTLGELGLPENEKIGNLSGG
                     QKKRVALAQAWVQKPDVLLLDEPTNHLDIDAIIWLENLLKAFEGSLVVITHDRRFLDN
                     IATRIVELDRGILRSYPGSFSKYSEKKAQELAVEAEHNRLFDKFHAQEEAWIRKGIEA
                     RRTRNEGRVRRLEELRRQRAERRNVQGQVNFKLDSGEKSGKIIAELEHTSFAYGGKVI
                     MDKFSAILQRGDKIGLIGPNGIGKTTFLKLILGELQPTYGRIRIGSKQEVAYFDQFRS
                     ALNENETVFYTLGQGNDYVEVGGKKKHVMSYLEDFLFPPARAQSPVSSLSGGERNRLL
                     LAKLFTRPANILVLDEPTNDLDIDTQELLEDLLRDYQGTVFLVSHDRMFLDNVITQSL
                     VFEGNGRLKEYIGGYQDYIDAKSREAKIQTESAPKTADAEPVKEKPKANRTVKLSYKE
                     QRELDALPDEIAALEAEQAEINAQLSDPEIFKDYEKAGALQSRAEEIEMLLLEKLERW
                     ELLETKQNGNAV"
     gene            3662..4027
                     /locus_tag="ACJJDE_001509"
     CDS             3662..4027
                     /locus_tag="ACJJDE_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541418.1"
                     /translation="MFKRPEEIIVLILAVLWIAGTYFLAALFGADAYTVLKITALTLL
                     WSAASFLLWQKNLSRHIWPLLLGCLTACWWPYLNQSVAPGSLPWYASWTFKTILALIP
                     VTAGYLFKWKQYRQRKTKP"
     gene            4138..5613
                     /gene="trpE"
                     /locus_tag="ACJJDE_001510"
     CDS             4138..5613
                     /gene="trpE"
                     /locus_tag="ACJJDE_001510"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009173174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HGG7541419.1"
                     /translation="MISKQEYQAQAAQGYNRIPLVQELLADLDTPLSLYLKLANRPYT
                     YLLESVVGGERFGRYSFIGLPCSHYLKASGKHVDVYQNGEIVEQHDGNPLPFIEAFHN
                     RFKTPEIPSLPRFTGGLVGYFGYETIYNFEHFAHRLKNTTKADPLGTPDILLMLSQEL
                     AVIDNLSGKIHLVVYADPSQPDGYERARERLEDIRTQLRQSCAIPLSLGSKHTEAVSE
                     FGEEPFKACVNKIKDYIFAGDCMQVVPSQRMSMEFTDSPLALYRALRTLNPSPYLFYY
                     DFGDFHIVGSSPEILVRRERNDVIVRPIAGTRLRGKTPAEDLANEQDLLSDAKEIAEH
                     VMLIDLGRNDVGRISKTGEVKVTDKMVIEKYSHVMHIVSNVEGRLKDGMTNMDILAAT
                     FPAGTLSGAPKVRAMEIIEEVEPSKRGIYGGAVGVWGFNNDMDLAIAIRTAVVKNNTL
                     YVQSGAGVVADSDPASEWQETQNKARAVIHAAQMVQEGLDK"
     gene            5610..6156
                     /locus_tag="ACJJDE_001511"
                     /pseudo
     CDS             5610..6156
                     /locus_tag="ACJJDE_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242626.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1643 domain-containing protein"
     gene            6153..7289
                     /locus_tag="ACJJDE_001512"
     CDS             6153..7289
                     /locus_tag="ACJJDE_001512"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HGG7541420.1"
                     /translation="MKNISLSPPATLGILGGGQLGRMFTVAAKTMGYKVTVLDPDPNA
                     PAAEFADRHLCAPFNDQTALDELAKCAAVTTEFENVNADAMRFLAKHTNVSPSGDCVA
                     IAQNRIQEKAWIRKAGLQTAPYQAVCKAEDITEASAQFLPGILKTATLGYDGKGQIRV
                     KTVDELKAAFAEHGGVDCVLEKMVDLRGEISVIVCRLNNDNVQTFDPAENIHENGILA
                     YSIVPARLSADIQQQARQMAQRLADELNYVGVLAVEMFVVGDTHELVVNEIAPRPHNS
                     GHHTVDACAADQFQQQVRLMCNLPPADTKLLSSCCMANILGDVWQEDGGEPDWFPLQS
                     RPDAHLHLYGKKTAHKGRKMGHFTVLTTDSDTAFQEAKKLHQSL"
     gene            7336..7818
                     /locus_tag="ACJJDE_001513"
     CDS             7336..7818
                     /locus_tag="ACJJDE_001513"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HGG7541421.1"
                     /translation="MNLLTLLRPATVQDCKDIFKVHLHSVQYTCILSYNEHALKVWEG
                     LLNTESYLPTISDPDKALWVAEYKGNIQGFFQIDCQEAQLDALYVHPLFHNLGLGTAL
                     LHQAETIAHKSGLSFLKLYASLNSVPFYLLNRYESLGSAVLQLDPSIKIKCELMRKHL
                     "
     gene            7924..8979
                     /locus_tag="ACJJDE_001514"
     CDS             7924..8979
                     /locus_tag="ACJJDE_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HGG7541422.1"
                     /translation="MKTYAPALYTAALLTACSPAADSNHPSGQNAPANTESDGKNITL
                     LNASYDVARDFYKEYNPLFIKTYQSEHPGTSVSIQQSHGGSSKQALSVANGLQADVVT
                     MNQSSDIDLLEKKGLVEKGWQQALPDHAAPYTSTMVFLVRKNNPKQIRDWNDLAKDGV
                     NIVIANPKTSGNGRYAFLGAYGYGLKATNGNEQEAQKLVASILKNTPVFENGGRAATT
                     TFTQRNIGDVLITFENEANYVSKKLTQGQFEIVYPSYTISAESPVAVVNSVVAKKGTQ
                     KTARAYLEYLWSEPAQELAASLYLRPRNPEVLARHKADFPDLDTFSPEEKFGGWDNIM
                     KTYFADGGIFDRLTAQK"
     gene            8976..9173
                     /locus_tag="ACJJDE_001515"
     CDS             8976..9173
                     /locus_tag="ACJJDE_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541423.1"
                     /translation="MTAMPSEPPFRRHSTHQNRKTAPKIIITRHNGKPDTKPNTAAKM
                     PSEAVGATILIWGITFLNHPF"
BASE COUNT         2571 a         2645 c         2052 g         2005 t
ORIGIN      
        1 gcttaagaat ataattgtaa gcgtaacgat tatttacgtt atgttaccat atccgactac
       61 aattcaaatt ttagaggttt taactatgaa aaaaacagtt tttacatatg ccatgatcgc
      121 cctgaccggt actgccgccg ctgcacaaga gcttcaaacc gctaatgagt ttaccgtcca
      181 caccgacctc tcttccattt cttcaactcg tgctttcctg aaagaaaaac acaaagctgc
      241 caaacacatc ggcgtgcgtg ctgatattcc ttttgatgcc aaccaaggca tccgcttgga
      301 agccggtttc gggcgcagca aaaaaaatat tattaatttg gaaacagatg agaacaagct
      361 gggtaagact aaaaatgtaa aactgcccac cggcgttcct gaaaaccgta tcgatcttta
      421 cacaggctac acctacaccc aaacgttaag tgattcttta aatttccgtg tgggtgccgg
      481 cttgggtttt gaatcttcaa aagacagcat taaaaccacc aagcatacgc ttcacagcag
      541 ccgtcagtcg tggttagcca aagttcacgc ggatttgctt tcccaactgg gtaacggctg
      601 gtatatcaac ccttggtctg aagtgaaatt tgacctcaat tcccgctata aattaaacac
      661 cggcgttacc aatctcaaaa aagacatcaa tcaaaaaacc aacggctggg gctttggatt
      721 gggtgcaaat attggtaaaa aactgggcga atccgccagc atcgaggcgg ggccgttcta
      781 caaacaacgc acttacaaag aatccggcga gtttagtgta acaaccacga gtggcgacgt
      841 atcgctcacc atcccgaaaa ccagtattcg tgaatacggc ttgcgcgtcg gcataaaatt
      901 ctgatgattt gaaatcatca ttgtcgcttt aaatgccaaa ccgcaaacta ttttggtttg
      961 cggtttttac gtgaaatgaa tttgaatagc cgatgccgtc tgaaactttt cagacggcat
     1021 ttttccaatc ggttaaaata cgcggtttgt ttttttagga acgcaccgtg cttgcctccg
     1081 ccatcgactt catcctccat atcgaccaac acctgctcgc gctgtcggcg caatacggtg
     1141 tgtggattta tgcgattctg tttttgattg ttttttgcga aaccggcctg attgttacgc
     1201 ccttactgcc cggcgattcg ctgctgtttg ccgccggcgg gattgccgcg ctgggcggta
     1261 tggatattca tttgatggtt gcattattaa gccttgccgc catactcggc gacgcgctca
     1321 attttactgt cggtaagtat ttcggcggca ggctgttcgc caatcccgat tctaaaatct
     1381 tccgacgcga atatctcgat aaaacccgcc gtttttacga aaaacacggc ggcaaaacga
     1441 ttatcatcgc gcgcttcgtg cccatcgtcc gcaccttcgc cccctttgtc gccggcatgg
     1501 gcaaaatgca ttatgcaaaa tttatccgct ataacatcat cggcggcttc ttgtgggtta
     1561 tcctgttttc ttatgcaggc tatttctttg ccaacttccc catcgtaaaa aacaatctgg
     1621 gcttggtgat gggcggcatc attattattt ccatcctgcc gggtgcagtt gaaattgccc
     1681 gcgccaaact tgcggtaaaa tccaaacggt aactgttgag aatttgtatc atgaatatat
     1741 tatccgtaga aaacgcttcc tttgccgtcg gccatgtcgc cctgctcgac aaaacgtcct
     1801 tccaactcga cagcggcgaa aaaatcggct taatcggacg caacggtgcg ggtaagtctt
     1861 cgtttttaaa aatcctcgcc ggtttgcaaa agctcgacga cgggcagatt attgttcaaa
     1921 acaacctcaa aatcgtttat gtaccgcagg aatccttttt tgataaggac gcaaccgtat
     1981 ttgataccgt tgccgaaggt ttgggtaaaa ttcgcgattt attgcgccgt taccaccgcg
     2041 tcggtcatga gttggaaaac ggttcgggtg aggctttgtt gaaagaactc aacgaattac
     2101 aacttgaaat cgaagcgaag gacggctgga agctggatgc ggcagtcaag cagactttgg
     2161 gcgaactcgg tttgccggaa aacgaaaaaa tcggcaacct ttccggcggt cagaaaaagc
     2221 gtgtcgcctt ggcgcaggct tgggtgcaga agcccgacgt attgctgctg gacgaaccga
     2281 ccaaccattt ggatattgac gcgattatct ggttggaaaa cctgctcaag gcgtttgaag
     2341 gcagcttggt cgtgattacc cacgaccgcc gttttttgga taatatcgct acgcggattg
     2401 ttgaacttga ccgcggcatt ctacgttcct atcccggctc gttctctaaa tacagtgaga
     2461 aaaaagcgca agagttggca gtcgaggcgg aacataaccg cttgtttgac aaatttcatg
     2521 ctcaggaaga agcgtggata cgcaaaggca tcgaagcgcg acgtacccgt aacgaaggac
     2581 gcgtgcgccg tttggaagag ctgcgccgcc aacgtgcaga acgccgcaac gtgcagggac
     2641 aggtcaactt taagctcgat agcggtgaga aaagcggcaa aatcatcgcc gaattggaac
     2701 acacttcgtt tgcctatggc ggcaaagtca ttatggacaa attctccgcc atcttgcagc
     2761 gtggcgacaa aatcggctta atcggcccaa acggtatcgg caaaaccacc ttcctcaagc
     2821 tgattttggg cgaattgcag ccgacctacg gcagaatccg tatcggcagc aagcaggaag
     2881 tcgcctattt cgaccagttc cgcagcgcgt tgaatgaaaa cgaaaccgtg ttttacacgc
     2941 tcggacaggg caatgattac gttgaagtcg gcggtaagaa aaagcatgtg atgagctatt
     3001 tagaagattt cctgttcccc cctgcccgcg cgcaaagtcc tgtttcttca ctctccggcg
     3061 gcgaacgcaa ccgccttttg ctggcaaaac tctttacccg tcccgccaat attttggtct
     3121 tggacgaacc gaccaatgac ttggacatcg acacccaaga gctgctcgaa gacctgttgc
     3181 gcgattatca aggcacggta ttccttgtct cgcacgaccg tatgttcctc gataacgtga
     3241 ttacccaaag ccttgttttt gaaggaaatg gaaggttaaa agaatatatc ggcggctatc
     3301 aggactacat cgacgcaaaa tcacgcgaag cgaagattca gacggaatcc gcacccaaaa
     3361 cagccgatgc cgaaccggtg aaagaaaaac ccaaagccaa ccgcacggtc aaactgtcct
     3421 acaaagaaca gcgagaactc gatgccctgc ccgacgaaat cgccgccttg gaagccgaac
     3481 aggcagaaat caacgcgcag ctttccgatc ccgaaatctt caaagattac gaaaaagccg
     3541 gcgcactgca aagccgcgcc gaagaaatcg aaatgctgct tttggaaaag ctggaacgct
     3601 gggagctgct ggaaaccaaa cagaacggca atgccgtctg aaatcaaaca ggaagaaaaa
     3661 aatgttcaaa cgacctgaag aaatcatcgt cctgatactt gccgtcctct ggattgccgg
     3721 tacgtatttt ctcgccgccc tgtttggagc ggacgcttat accgtgttaa aaatcactgc
     3781 ccttaccctg ctttggtctg ccgcatcatt cctcctttgg caaaaaaacc tcagccggca
     3841 tatctggccg ctgctgctcg gctgcctgac tgcctgttgg tggccgtatc tgaatcaatc
     3901 ggtcgcaccc ggttctttac cttggtatgc atcatggacg ttcaaaacca tcttagccct
     3961 gattcccgta accgcaggtt atctgtttaa atggaaacaa taccggcagc gcaaaacaaa
     4021 gccgtaagcc cgtctttttc agacggcatc tccggtcaga ctgtcaacaa ttccgataaa
     4081 atgctatact cgcgcccgtt gccgcgccgt ccgaaaccgc cctttgggaa agcagaaatg
     4141 atcagcaaac aagaatacca agcccaagcc gcccaaggct acaaccgcat cccgctcgtg
     4201 caagaactcc ttgccgattt ggatacgccg ctttccctct atctcaaact cgccaaccgc
     4261 ccctatacct acctgctcga atccgttgtc ggtggcgaac gtttcggccg ctattctttt
     4321 atcggcctgc cttgcagcca ctatctcaaa gccagcggca aacacgtcga tgtttatcaa
     4381 aacggcgaaa ttgtcgagca acacgacggc aaccccctgc cctttatcga agccttccac
     4441 aaccgcttca aaacacccga aatcccaagc ctgccgcgct ttaccggcgg actggtcggc
     4501 tacttcggtt acgaaaccat ctacaatttt gaacacttcg cccaccgcct gaaaaacacc
     4561 accaaagccg acccgctcgg cacgcccgac atcttgctga tgctgtcgca agaattggcg
     4621 gtgatcgaca atttgagcgg caaaatccat ctcgtcgttt acgccgatcc gtcgcagccc
     4681 gacggctacg aacgcgcccg cgaacgcctc gaagacatcc gcacccagtt gcgccaaagc
     4741 tgcgccatcc cgctctcgct cggcagcaaa cacaccgaag ccgtcagcga attcggcgaa
     4801 gagccgttca aagcctgcgt taacaaaatc aaagactaca tcttcgcagg cgactgcatg
     4861 caggttgtcc ccagccagcg catgagcatg gaattcaccg acagcccgct cgccctctac
     4921 cgcgccctgc gtacgctcaa cccttcgcct tatctctttt actacgattt cggcgatttc
     4981 cacatcgtcg gctcctcgcc cgaaatcctc gtccgacgcg aacgcaacga cgttatcgtc
     5041 cgccccatcg ccggcacgcg cctgcgcggc aaaacccccg ccgaagacct tgccaacgaa
     5101 caagatttgt taagcgatgc caaagaaatc gccgaacacg tcatgttgat tgacttagga
     5161 cgcaacgacg tcggccgcat cagtaaaacc ggcgaagtca aagttaccga caaaatggtg
     5221 attgaaaaat actcccatgt aatgcacatc gtttccaacg tcgaaggccg tctgaaagac
     5281 ggcatgacca acatggacat cctcgccgct accttccctg ccggcacact ctccggcgca
     5341 cccaaagtcc gcgccatgga aatcatcgaa gaagtcgaac cgagcaaacg cggcatctac
     5401 ggcggtgccg tcggcgtatg gggtttcaac aacgacatgg atttggcaat cgccatccgc
     5461 accgccgtag taaaaaacaa cacgctatac gtccaaagcg gcgcgggcgt ggttgccgac
     5521 tccgatccgg cctccgaatg gcaggaaaca caaaacaaag cccgagccgt catacacgcc
     5581 gcgcaaatgg tacaggaagg gttggataaa tgacttatga aaaactttat gagcttcgcc
     5641 aaacactcag accgactacc aaagacggtc tctatacaga taatgaaaaa aatcgagaaa
     5701 tcctaacggt tagatggagc ggcaacacag aaaatcctaa aaatttctca gctgtcgcta
     5761 taggaattaa tccaagtaaa gcaaatgatg aaagaagcga caaaaccctt acccaacttg
     5821 cacgtttctt ggatatgtac ggttttacca acttcaaaat gttaaatatt ttttccagtt
     5881 actctacaca gcaaacagga attaggacaa acacccaaac cgatttttcc aaatttaaag
     5941 gatgtttgga agatgctgat atgattattc ttgcatgggg tacagaccgc ggtgcttata
     6001 aggatgaaaa aaaacagaat actggaattt ctaaaagcag aaaaatttat ggaaaaagta
     6061 ttctgtattt ctgaaactgg taattccagc gatacaagac atccgtcaag aattagttat
     6121 agctatcaac ttgtacaatt tgaagagtca gcatgaaaaa catatctctt tctccgcccg
     6181 ccacgctcgg aatcctcggc ggcggacaat taggcagaat gtttaccgtt gccgccaaaa
     6241 ccatgggcta caaagtaacc gtactcgacc ccgatccgaa cgctccggcg gcggaatttg
     6301 ccgaccgcca tttgtgcgcg ccgtttaacg accagaccgc gttggacgag ttggcaaaat
     6361 gcgcggcggt tacgaccgaa tttgaaaacg tcaatgccga cgcgatgcgt tttctggcaa
     6421 aacataccaa cgtttccccc agcggcgact gcgttgccat cgcgcaaaac cgcattcagg
     6481 aaaaggcatg gatacgcaaa gcaggtctgc aaaccgcgcc gtatcaagca gtttgcaaag
     6541 ccgaagacat cactgaagca agcgcgcaat tcctgcccgg tattctgaaa acggccactt
     6601 tgggctacga cggcaaaggt caaatccgcg tcaaaacggt ggacgaactc aaagccgcgt
     6661 ttgccgaaca cggcggcgtg gattgcgttt tggaaaaaat ggtggatttg cgcggcgaaa
     6721 tttccgttat cgtatgccgt ctgaacaatg acaacgtgca aactttcgat cctgccgaaa
     6781 acattcacga aaacggtatc ctcgcctact ccatcgtccc agcccgactg agtgccgaca
     6841 ttcagcaaca ggcgcgacaa atggcgcagc gtttggccga tgaattgaac tacgtcggcg
     6901 tattggcggt agaaatgttt gttgtcggcg acacgcatga attggtcgtc aacgaaatcg
     6961 cgccgcgtcc gcacaattcc ggccaccata ccgtcgacgc ctgcgcggca gaccaattcc
     7021 agcaacaggt ccgcctgatg tgcaacctgc cacctgctga caccaaattg ctgagttctt
     7081 gctgtatggc gaatattttg ggcgacgttt ggcaggaaga cggcggcgaa ccggattggt
     7141 ttcccctgca aagccggccg gacgcgcacc tgcaccttta cggcaaaaaa accgcgcaca
     7201 aagggcggaa aatgggacac tttaccgttt taaccaccga ttcggacacc gcatttcaag
     7261 aagcaaaaaa actgcatcag tccctataat ccgaccaacg gcacagatgc cgtctgaagc
     7321 cgccgacata ctgccatgaa cctgctgaca ctgttacgcc ccgccaccgt gcaagactgc
     7381 aaagacatct tcaaagtcca cctgcactcc gtccaataca cctgcatcct cagctacaac
     7441 gaacacgccc taaaagtatg ggaaggcttg ttaaacacag aaagctacct gccgaccatt
     7501 tccgatcccg acaaagcact ttgggttgcc gaatacaaag gcaacataca gggatttttc
     7561 caaatcgact gccaagaagc acaactcgat gcactttacg tccaccccct gttccacaac
     7621 ctcggactgg gcactgccct gcttcatcag gcggaaacca tcgcccacaa atctggtttg
     7681 agctttctga aactctacgc atcgctcaac tccgtcccgt tttaccttct caaccgctac
     7741 gaatcgctcg gttcggcagt attgcagctt gaccccagca tcaaaatcaa atgcgaactg
     7801 atgcggaaac acctctgatc cgtccttata accaaaactg ataatcttca aatcaaacat
     7861 tatttccaca agcgcagaca gccgtataaa gttgccccat ctaccaaccg acaggacaag
     7921 catatgaaaa cctacgcacc ggcactctat accgcagccc tgctcaccgc ctgcagcccc
     7981 gcagccgatt caaaccatcc gtccggacaa aatgccccgg ccaataccga atccgacgga
     8041 aaaaacatta ccctgctcaa cgcctcatac gatgtggcac gggattttta caaagaatac
     8101 aaccccttat ttatcaaaac ataccaatcc gaacaccccg gcacatccgt cagcatccaa
     8161 cagtcccacg gcggctccag caaacaggca ttatccgtag ccaacggcct tcaagccgat
     8221 gtcgtaacca tgaaccaatc ctccgacatc gacctgctcg aaaaaaaagg actggtagaa
     8281 aaaggctggc aacaagccct ccccgaccac gccgcgccct acaccagcac tatggttttc
     8341 cttgtccgaa aaaacaaccc caaacagatc cgcgattgga acgaccttgc caaagacggc
     8401 gttaacatcg tcatcgccaa tcccaaaacc tcgggcaacg gacgctacgc cttcctcggc
     8461 gcatacggtt acggtctgaa agccaccaac ggcaacgaac aggaagccca aaaactcgtc
     8521 gcatccatcc tcaaaaacac ccccgttttt gaaaacggcg gacgcgccgc caccaccacc
     8581 ttcacacaac gcaacatcgg cgacgtactc attacttttg aaaacgaagc caactacgtc
     8641 agcaaaaaac tgacccaagg acagtttgaa atcgtctatc cgagctacac catttccgcc
     8701 gaaagccccg tcgccgtcgt caacagcgtc gtcgcgaaaa aaggcacgca aaaaaccgcc
     8761 cgcgcctatc tcgaatacct ttggagcgaa ccggcgcaag aactcgccgc ctcactctac
     8821 ctgcgccccc gcaaccccga agtattggca agacacaaag ccgacttccc agacttagac
     8881 accttctctc ccgaagaaaa attcggcgga tgggacaaca tcatgaaaac ctacttcgct
     8941 gacggcggca tattcgaccg cctgaccgca caaaaatgac cgctatgccg tctgaaccgc
     9001 ctttcagacg gcattccaca catcaaaaca gaaaaaccgc gcccaaaatc atcatcacaa
     9061 gacacaacgg caaaccggat acaaaaccca acaccgccgc caaaatgccg tctgaagccg
     9121 tcggcgcaac catccttatc tggggcataa ctttccttaa ccatcccttt tgacagccaa
     9181 ataaacagtg cttttgcctg tcagaaacaa aaccaatatt ttgcagttcg tatcggaaca
     9241 tttatagtgg attaacaaaa accagtacag cgt
//
LOCUS       DBBZXU010000074         9263 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.074, whole genome shotgun sequence.
ACCESSION   DBBZXU010000074 DBBZXU010000000
VERSION     DBBZXU010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.074"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..436
                     /locus_tag="ACJJDE_001516"
     CDS             <1..436
                     /locus_tag="ACJJDE_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541424.1"
                     /translation="VKEYQPPVGIFLFVCFEKCLFPDFAIPIRFCAVRCVLARTCSKS
                     DVVPVFEALIRDADFQYIFLSYNNEGLMSVGQVREIFECFGKYNLVQTEYRRFKADKT
                     ENRNHKANSIFEYLHILEKTFYSGLTKTSTALPRLSSKRTIL"
     gene            571..669
                     /locus_tag="ACJJDE_001517"
     CDS             571..669
                     /locus_tag="ACJJDE_001517"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="eamA-like transporter family protein"
                     /protein_id="HGG7541425.1"
                     /translation="MAVVFLDERPNTQEWIGLGLVTAGVLTLALKR"
     gene            complement(740..2125)
                     /locus_tag="ACJJDE_001518"
     CDS             complement(740..2125)
                     /locus_tag="ACJJDE_001518"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003941 - L-serine ammonia-lyase activity
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HGG7541426.1"
                     /translation="MVSIFDIFKIGIGPSSSHTVGPMKAAAAFAAGLDAQAVRIVIDI
                     YGSLALTGYGHGTFDALMLGLEGSLPHDIPLAGIPERLERIRTQHILRLNGQEIRFIP
                     DRDLNIRGNQVLPKHPNGLRFTAYASDGIVLKEQVYYSTGGGFVVTGEDFERQSETEK
                     TVPYPYNSCAELLDRCRLNRLDISEVVLANEAALAGCGEAEIRRRAAAVAEVMEGCIK
                     RGLGADGELPGGLNVRRRAPQLAAKLKVLRETEIVNTQLWPMVYAMAVNEENAAGGRV
                     VTAPTNGAAGIIPAVLHYFRKFNPHATQERVENFLLTAGAIGILYKTNASISGADVGC
                     QGEVGVACSMAAGAYAEVIGGTPKQVENAAEMAMEHHLGLTCDPVGGLVQIPCIERNG
                     IAAEKALKLGTLALLEDGTDKKVSLDEVIRTMLQTGRDMKATYKETSLAGLAATLRKK
                     AVPVSVRVVEC"
     gene            complement(2224..4614)
                     /gene="gyrB"
                     /locus_tag="ACJJDE_001519"
     CDS             complement(2224..4614)
                     /gene="gyrB"
                     /locus_tag="ACJJDE_001519"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004283954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005694 - chromosome [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HGG7541427.1"
                     /translation="MTEQKHEEYGADSIQVLEGLEAVRKRPGMYIGDTQDGSGLHHMV
                     FEVLDNAIDEALAGHCDKITVTIHADHSVSVADNGRGMPTGIHPKEGRSAAEVIMTVL
                     HAGGKFDNNSYKISGGLHGVGVSVVNALSDWVTLTIYRDGKEHFVRFVRGETEEPLKV
                     VGDSDKKGTTVRFLASTETFGNVEYSFDILAKRIRELSFLNNGVDIELTDERDGKHES
                     FALSGGVAGFVQYMNRKKTPLHEKIFYAFGEKDGMSVECAMQWNDSYQESVQCFTNNI
                     PQRDGGTHLTALRQVMTRTINSYIEANEVAKKAKVETAGDDMREGLTCVLSVKLPDPK
                     FSSQTKDKLVSSEIGPVVNEVINQALTDFLEENPNEAKIITGKIVDAARAREAARKAR
                     EITRRKGVMDGLGLPGKLADCQEKDPALSELYLVEGDSAGGSAMQGRDRKFQAILPLK
                     GKILNVEKARFEKMLASQEVAALITALGAGIGKEEFNAEKLRYHRIIIMTDADVDGAH
                     IRTLLLTFFYRQMPELVERGYIYIAQPPLYKAKYGKQERYLKDELEKDQWLLGLALEK
                     AKIVSDSRTIEGEELANTAKQFLLAKTVIEQESRIIDELVLHAMLHASPVDLSTAESA
                     DRSVAELNGLLDEKEVALERIEGHEGHQFIKITRKLHGNVVVSYLEPKFLNSKAYQTL
                     TQTAAALKGMVGKGAKLYKGDNEYDIDSFEGALDILMSVAQKGMSIQRYKGLGEMNPE
                     QLWETTMDPAVRRLLKVRIEDAIAADEVFVTLMGDEVEPRRAFIENNALIAQNIDA"
     gene            4884..5756
                     /locus_tag="ACJJDE_001520"
     CDS             4884..5756
                     /locus_tag="ACJJDE_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel domain-containing
                     protein"
                     /protein_id="HGG7541428.1"
                     /translation="MEIWNMLDTWLGAVPIRAEAVESVAVVAALLLARALLLNIHFKR
                     HPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELI
                     MCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
                     FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQ
                     RHLENVQAEKLFITPAARPRVTRVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRV
                     QYRLLNYPAGSETL"
     gene            5844..7880
                     /locus_tag="ACJJDE_001521"
     CDS             5844..7880
                     /locus_tag="ACJJDE_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019270417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HGG7541429.1"
                     /translation="MTDNALLHLGEEPRFDQIKTEDIKPALQTAIAEAREQIAAIKAQ
                     THTGWANTVEPLTGITERVGRIWGVVSHLNSVADTPELRAVYNELMPEITVFFTEIGQ
                     DIELYNRFKTIKNSPEFDTLSPAQKTKLNHDLRDFVLSGAELPPEQQAELAKLQTEGA
                     QLSAKFSQNVLDATDAFGIYFDDAAPLAGIPEDALAMFAAAAQSEGKTGYKIGLQIPH
                     YLAVIQYADNRELREQIYRAYVTRASELSDGGKFDNTANIDRTLANALQTAKLLGFKN
                     YAELSLATKMADTPEQVLNFLHDLARRAKPYAEKDLAEVKAFARESLNLADLQPWDLG
                     YASEKLREAKYAFSETEVKKYFPVGKVLNGLFAQIKKLYGIGFTEKTVPVWHKDVRYF
                     ELQQNGETIGGVYMDLYAREGKRGGAWMNDYKGRRRFSDGTLQLPTAYLVCNFAPPVG
                     GREARLSHDEILILFHETGHGLHHLLTQVDELGVSGINGVEWDAVELPSQFMENFVWE
                     YNVLAQMSTHEETGEPLPKELFDKMLAAKNFQRGMFLVRQMEFALFDMMIYSEDDEGR
                     LKNWQQVLDSVRKEVAVIQPPEYNRFALSFGHIFAGGYSAGYYSYAWAEVLSADAYAA
                     FEESDDVAATGKRFWQEILAVGGSRSAAESFKAFRGREPSIDALLRHSGFDNAA"
     gene            complement(8503..9069)
                     /locus_tag="ACJJDE_001522"
     CDS             complement(8503..9069)
                     /locus_tag="ACJJDE_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP family protein"
                     /protein_id="HGG7541430.1"
                     /translation="MSLYALLLIALGMSMDAFAVALAKGAAVRMPPRKIAATALVFGS
                     VEALTPLAGWVGGFYAKPFISEWDHWAAFVLLGGLGLKMMREGLSGKAEDVRESKRES
                     LWMTVLTAFGTSIDSMIVGVGLAFMEVNIAFAAAIIGMATTVMVAVGLTAGRALGVLF
                     GRRAEFAGGLVLIAIGTWTLLSHLGLIQ"
BASE COUNT         2059 a         2570 c         2481 g         2153 t
ORIGIN      
        1 agttaaggaa taccaacctc cggttggtat ttttttgttt gtatgctttg aaaaatgttt
       61 gtttccggat tttgccattc ccatccggtt ttgcgctgta cgatgtgttt tagcgcggac
      121 ttgctcaaaa tcggatgtgg ttccggtatt tgaggctttg attagggatg cggactttca
      181 atatattttt ctcagctaca acaacgaagg cttgatgtct gtcgggcagg taagggagat
      241 ttttgagtgt ttcggcaaat ataatttggt tcaaacggaa taccggcgtt ttaaggcaga
      301 taagacagaa aaccgtaatc ataaggcaaa ttcgatattc gaatatctgc atattttaga
      361 aaagaccttt tatagtggat taacaaaaac cagtacagcg ttgcctcgcc ttagctcaaa
      421 gagaacgatt ctctaaggtg ctgaagcacc aagtgaatcg gttccgtact atttgtactg
      481 tctgcggctt cgtcgccttg tcctgatttt tgttaatcca ctataaaaat tcttgccgga
      541 tgctgcaaac aacgccggtt tgcattcctg atggcggtgg ttttcttaga cgaacgcccg
      601 aacacgcagg aatggatagg cttggggctg gttacggcgg gcgtgttgac gctggcactg
      661 aaacggtaaa gccgcaagaa ataaatgaaa tgccgtctaa aaaactgttt tcagacggca
      721 ttttcgtttc tgtccatcct cagcactcga ccacgcgcac ggatacgggg acggcttttt
      781 tccggagcgt ggcggcgagt ccggcaagcg aggtttcttt gtaggtcgcc ttcatatccc
      841 ggccggtttg cagcatggtt cggatgactt cgtcgagcga gacttttttg tccgtgccgt
      901 cttctaaaag cgcgagcgtg ccgagtttga gggctttttc ggcggcgatg ccgttgcgct
      961 cgatgcaggg gatttgcacc agtccgccga cggggtcgca agtcagcccc aaatggtgtt
     1021 ccatcgccat ttcggcggcg ttttccactt gtttgggcgt gccgccgatg acttcggcgt
     1081 atgcgcccgc cgccatcgaa cacgctacgc cgacttcgcc ctgacagccg acatccgcac
     1141 cggaaatgga ggcgttggtc ttgtagagga tgccgattgc gcctgcggtg agcaggaagt
     1201 tttcgacgcg ttcctgtgtg gcgtgcggat tgaacttgcg gaaatagtgc aatacggcgg
     1261 gaatgatgcc tgccgcgccg ttggtcggtg cggtaacgac gcgtccgccg gcggcgtttt
     1321 cttcgttgac cgccatggcg tacaccatcg gccagagctg ggtgttgacg atttcggttt
     1381 cgcgcaggac tttgagcttg gcggcaagct gcggggcgcg gcggcggacg ttcaatccgc
     1441 cgggcagttc gccgtccgca cccaagccgc gtttgatgca gccttccata acctcggcaa
     1501 cggcagcggc gcggcggcgg atttcggctt cgccgcatcc ggcaagcgcg gcttcgtttg
     1561 ccaacacgac ttcggagatg tcgagccggt tcagacggca tcggtcaagc agctcggcac
     1621 aactgttgta aggataagga acagtttttt ccgtttccga ctgccgctcg aaatcttctc
     1681 cggtaacgac aaacccgccg ccggtcgagt aataaacctg ttctttcaag acgatgccgt
     1741 ctgaagcata ggcggtaaat cgcaggccgt tggggtgttt gggcagcact tgattgccgc
     1801 gtatgttcag gtcgcggtcg gggatgaagc ggatttcttg cccgttgagc cggaggatgt
     1861 gctgcgtgcg gatgcgttcg aggcgttcgg gaatgccggc aagcgggatg tcgtgcggca
     1921 ggctgccttc caaaccgagc atcagcgcgt caaatgtacc gtgtccgtat ccggtcagtg
     1981 cgagcgagcc gtaaatgtcg atgacgatgc gaacagcctg tgcatccaaa cctgccgcaa
     2041 aggcggcggc tgccttcatc gggccgaccg tatgcgaact ggaaggcccg ataccgattt
     2101 tgaaaatatc aaaaatgctg accatggttt tgctccgaaa ggcggtttca gacggcatgg
     2161 cttccgtttg acaaaccaaa aggagacgcg gcacgatgcc cgtctccttt tttaaaacgg
     2221 cacttatgcg tcgatatttt gggcaatcag cgcgttgttt tcgataaagg cgcggcgcgg
     2281 ttcgacctcg tcgcccatca gggtaacgaa tacttcgtcg gcggcaatgg catcttcgat
     2341 gcgcactttc aacaggcggc gcacggcggg atccatcgtg gtttcccaca gctgttcggg
     2401 gttcatctcg cccaagcctt tgtatcgttg gatggacata cctttttggg caacgctcat
     2461 caagatgtcc aaagcgcctt caaagctgtc gatgtcgtat tcgttgtcgc ctttgtagag
     2521 cttcgcccct ttgccgacca tgcctttaag tgcggcggcg gtttgggtaa gggtttgata
     2581 ggctttgctg ttgaggaact taggctcgag gtagctcacc accacattgc cgtgcagctt
     2641 gcgtgtgatt ttgatgaact ggtgtccttc gtggccttcg atacgttcga gcgcgacttc
     2701 tttttcgtcc aagaggccgt tcaattcggc aacggagcgg tctgcgcttt ctgctgtgct
     2761 gagatcgacc ggcgaagcat gtagcatggc atgcaggacg agttcgtcaa tgatgcggct
     2821 ttcttgctcg atgacggttt tggccaacag gaattgtttg gcggtattgg caagctcttc
     2881 gccttcgatg gtgcggctgt ctgaaacgat tttggctttt tccaaggcta aaccgagcag
     2941 ccattggtct ttttccaatt cgtctttgag atatcgttct tgtttgccgt atttggcttt
     3001 gtataaaggc ggctgggcaa tgtagatgta gccgcgttcg accagctcgg gcatttggcg
     3061 gtagaagaag gtcaggagca gggtgcggat gtgcgcgccg tccacgtcgg catcggtcat
     3121 gatgatgatg cggtggtaac gcagtttttc ggcattgaat tcttctttgc cgatgcccgc
     3181 gcccaacgcg gtaatcaaag cggctacttc ctgactggcg agcatttttt caaagcgcgc
     3241 tttttcgacg ttcaaaatct tgcccttaag cggcaaaatc gcttggaatt tgcggtcgcg
     3301 cccctgcatg gcggaaccgc ctgcagaatc gccctcgacc agataaagtt ctgacaatgc
     3361 ggggtctttt tcttggcagt cggcgagttt accgggtagc cccaagccgt ccattacgcc
     3421 tttgcggcgg gtgatttcgc gggctttgcg ggcggcttcg cgcgcgcggg cggcatcgac
     3481 gattttgccg gtgatgattt tggcttcgtt cgggttttct tcaaggaagt cggtcagcgc
     3541 ttggttgatg acttcgttga caacggggcc gatttcgctg gaaaccagtt tgtctttggt
     3601 ttgggatgag aatttggggt cgggcagttt gacggacaac acgcaggtca aaccttcgcg
     3661 catatcgtcg cctgctgttt ccactttggc ttttttggcg acttcgttgg cttcgatgta
     3721 gctgttgatg gtgcgtgtca tcacttggcg caacgcggtc aagtgcgtac cgccgtcgcg
     3781 ctgagggatg ttgttggtga agcactgcac gctttcttgg tagctgtcgt tccactgcat
     3841 cgcgcattcg acgctcatgc cgtctttctc gccgaacgca tagaagattt tttcgtgcaa
     3901 cggcgttttt ttgcggttca tgtattgcac gaaaccggcc acgccgccgg aaagggcgaa
     3961 gctttcgtgt ttgccgtcgc gttcgtcggt caattcgatg tccacgccgt tgttcaggaa
     4021 ggaaagttcg cgaatgcgtt tggcgaggat gtcgaagctg tattcgacgt tgccgaaagt
     4081 ttccgtgctg gcgaggaagc gtacggtcgt gcctttcttg tcggaatcgc cgacaacttt
     4141 cagcggctct tcggtttcgc cgcgcacgaa gcggacgaag tgttctttgc cgtcgcggta
     4201 gatggtcagc gtaacccagt cggacagcgc gttgacgacg gacacgccca cgccgtgcag
     4261 gccgccggag attttgtagc tgttgttgtc gaatttaccg cccgcgtgca agacggtcat
     4321 gatgacttcg gcggcggagc gtccttcttt cgggtggatg ccggtgggca taccgcgccc
     4381 attgtcggcg acgctgacgg aatggtcggc gtggatggta acggtgattt tgtcgcaatg
     4441 tccggcgagt gcttcgtcaa tggcgttgtc caatacttcg aacaccatgt ggtgcaggcc
     4501 gctgccgtcc tgcgtgtcgc cgatgtacat accggggcgt ttgcgtaccg cttccaagcc
     4561 ttcgagcacc tgaatgctgt cggcgccgta ttcttcgtgt ttttgttcag tcatattttt
     4621 tgccggattt tgaaaagatt ttgcgatgcc gccaaaacaa gtccgcacct tgtggaaaaa
     4681 gcgggcggga cgacatatat aattgtgtat tatagccgat tttgccgcct aattcagcgt
     4741 tatccgcatc agtgtgccgc cgggaaaaga tgaaacggta cgtttgcctc cggcatcagg
     4801 tcggggattg tcccgtaaag tggcaaaagc gtttttttgc cactaaaatc tacaccctat
     4861 acttttcgga caggggcgcg gaaatggaaa tatggaatat gttggacact tggctcggtg
     4921 ccgtcccgat acgtgcggag gcggtcgaat ccgtggcggt ggtcgcggct ttgctgctgg
     4981 cgcgcgccct tctgttgaat atccacttca aacggcatcc ggatttcggc atcgaaagca
     5041 agcggcggtt tttggttgcc agccgcaata taacgctgct tttggtgctg ttttcgctgg
     5101 catttatctg gtcggcgcaa atccaaacgc tggctttgtc gatgtttgcg gtggcggcgg
     5161 cggtcgtcgt ggcgacgaag gaactgatta tgtgtctgtc gggcagtatt ttaaggtctg
     5221 ccacccagca atactcggtc ggcgactata tcgaaatcaa cggcctgcgc gggcgcgtgg
     5281 tcgacatcaa cctgttgaac acgctgatga tgcaggtcgg tccgaacccc ttggtcggac
     5341 agcttgcggg aaccaccgtt tctttcccca acagcctgtt gttgagccac cccgtgcgcc
     5401 gcgacaatat tttgggcgac tatgtcatcc atacggtcga aatccccgtt cccatccatt
     5461 tggattcgga tgaagccgta tgccgtctga aagccgtact cgagcccttg tgcgcgccct
     5521 acatccccgc catccaacgg catttggaaa acgtgcaggc ggaaaaactg tttatcacgc
     5581 ccgccgccag accgcgcgtt acccgcgtgc cgtacgatga caaggcatac cgcatcatcg
     5641 tccgcttcgc ctcccccgtt tcaaagcggc tggaaatcca acaggcggtt atggacgaat
     5701 ttttgcgcgt acaataccgc ctgttaaatt accccgccgg ctccgaaaca ctttaacttt
     5761 ccccgaccga ccccatttcc ggcttcagac ggcatattgc cgatatgctg tctgaagcac
     5821 aacacgcaaa ggaaacccat cttatgactg acaacgcact gctccatttg ggcgaagaac
     5881 cccgttttga tcaaatcaaa accgaagaca tcaaacccgc cctgcaaacc gccatcgccg
     5941 aagcgcgcga acaaatcgcc gccatcaaag cccaaacgca caccggctgg gcaaacactg
     6001 tcgaacccct gaccggcatc accgaacgcg tcggcaggat ttggggcgtg gtgtcgcacc
     6061 tcaactccgt cgccgacacg cccgaactgc gcgccgtcta taacgaactg atgcccgaaa
     6121 tcaccgtctt cttcaccgaa atcggacaag acatcgagct gtacaaccgc ttcaaaacca
     6181 tcaaaaactc ccccgagttc gacaccctct cccccgcgca aaaaaccaaa ctcaaccacg
     6241 atctgcgcga tttcgtcctc agcggcgcgg aactgccgcc cgaacagcag gcagaactgg
     6301 caaaactgca aaccgaaggc gcgcaacttt ccgccaaatt ctcccaaaac gtcctagacg
     6361 cgaccgacgc gttcggcatt tactttgacg atgctgcacc gcttgccggc attcccgaag
     6421 acgcgctcgc catgtttgcc gctgccgcgc aaagcgaagg caaaacaggc tacaaaatcg
     6481 gtttgcagat tccgcactac ctcgccgtca tccaatacgc cgacaaccgc gaactgcgcg
     6541 aacaaatcta ccgcgcctac gttacccgcg ccagcgaact ttcagacggc ggcaaattcg
     6601 acaacaccgc caacatcgac cgcacgctcg caaacgccct gcaaaccgcc aaactgctcg
     6661 gcttcaaaaa ctacgccgaa ttgtcgctgg caaccaaaat ggcggacacg cccgaacaag
     6721 ttttaaactt cctgcacgac ctcgcccgcc gcgccaaacc ctacgccgaa aaagacctcg
     6781 ccgaagtcaa agccttcgcc cgcgaaagcc tgaacctcgc cgatttgcaa ccgtgggact
     6841 tgggctacgc cagcgaaaaa ctgcgcgaag ccaaatacgc gttcagcgaa accgaagtca
     6901 aaaaatactt ccccgtcggc aaagtattaa acggactgtt cgcccaaatc aaaaaactct
     6961 acggcatcgg atttaccgaa aaaaccgtcc ccgtctggca caaagacgtg cgctattttg
     7021 aattgcaaca aaacggcgaa accataggcg gcgtttatat ggatttgtac gcacgcgaag
     7081 gcaaacgcgg cggcgcgtgg atgaacgact acaaaggtcg ccgccgtttt tcagacggca
     7141 cgctgcaact gcccaccgcc tacctcgtct gcaacttcgc cccgcccgtc ggcggcagag
     7201 aagcgcgttt gagccacgac gaaatcctca tcctcttcca cgaaaccgga cacgggctgc
     7261 accacctgct tacccaagtg gacgaactgg gcgtgtccgg tatcaacggc gtagaatggg
     7321 acgcggtcga actgcccagc cagtttatgg aaaatttcgt ttgggaatac aatgtattgg
     7381 cgcaaatgtc cacccacgaa gaaaccggcg agcccctgcc gaaagaactc ttcgacaaaa
     7441 tgctcgccgc caaaaacttc caacgcggaa tgttcctcgt ccgccagatg gagttcgccc
     7501 tcttcgatat gatgatttac agcgaagacg acgaaggccg tctgaaaaac tggcaacagg
     7561 ttttagacag cgtgcgcaaa gaagtcgccg tcatccaacc gcccgaatac aaccgcttcg
     7621 ccttgagctt cggccacatc ttcgcaggcg gctattccgc aggctattac agctacgcgt
     7681 gggcggaagt attgagcgcg gacgcatacg ccgcctttga agaaagcgac gatgtcgccg
     7741 ccacaggcaa acgcttttgg caggaaatcc tcgccgtcgg cggatcgcgc agcgcggcag
     7801 aatccttcaa agccttccgc ggccgcgaac cgagcataga cgcactcttg cgccacagcg
     7861 gtttcgacaa cgcggcctga cggcaagggt gaagtaaaaa ataggaggat tcgatataaa
     7921 aacatccgca ccgtcattcc cgcgtaggcg ggaatccaga ccggtcggca cggaaactta
     7981 tcggataaaa cggtttcttt agattttacg ttctagattc ccgctttcgc gggaatgacg
     8041 cggaaaagtt gctgtgattt cggataaatt ttcgcaacgt ttaatttccg ttttacctga
     8101 taaatgcccg caatctcaaa tcccgtcatt ccccaaaaac aaaaaaaatc aaaaacagaa
     8161 atcccgtcat tcccgcgcag gcgggaatcc aggtctgtcg gtgcggaaac ttatcggata
     8221 aaacggtttc tttagatttt acgttctaga ttcccgcttt cgcgggaatg acggaatatt
     8281 tttgaatttg ataaaaatgc cgtctgaaac ggtcaaacaa cgcttcagac ggcattttat
     8341 agtggattaa caaaaatcag gacaaggcga cgaagccgca gacagtacaa atagtacgga
     8401 accgattcac ttggtgcttc agcaccttag agaatcgttc tctttgagcc aaggcgaggc
     8461 aacgacgtac tggtttttgt taatccacta tattttccga catcattgaa tcaaacccaa
     8521 atgcgacaag agcgtccatg taccgatggc aatcaacacc aaacctccgg caaattccgc
     8581 acgcctgccg aacaatacgc ccaaagccct tcccgccgtc agcccgaccg ccaccatcac
     8641 cgtcgtcgcc ataccgatga ttgcggcggc aaaggcgatg tttacctcca taaacgccaa
     8701 gcccaccccg actatcatgg aatcaatact ggttccaaaa gcagtcaaaa ccgtcatcca
     8761 taggctttcc cgtttgcttt cgcgcacatc ttccgccttg ccggacagcc cttcgcgcat
     8821 cattttcaga cccagcccgc ccagcaggac gaaagccgcc caatggtccc attcgctgat
     8881 aaacggtttg gcataaaaac cgcctaccca gcctgccagc ggcgtgagtg cttcaaccga
     8941 gccgaacacc aaggctgttg ctgcaatttt gcgcggaggc atcctgaccg ccgcaccctt
     9001 tgccaatgcg acggcaaacg catccatcga catccccagc gcaatcaaga gcaaagcgta
     9061 aagactcata ccgcacccat cctcaaaaag ggcagattat agcaaaacag caaagcgcga
     9121 aaaacgccgc acgaaaaccc acatcccgtc attcccgcgc aggcgggaat ccagagttgt
     9181 cggtgcggaa acttatcggg aaaaacggtt tctttagatt ttatagtgga ttaacaaaaa
     9241 ccagtacagc gttgcctcgc ctt
//
LOCUS       DBBZXU010000075         9216 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.075, whole genome shotgun sequence.
ACCESSION   DBBZXU010000075 DBBZXU010000000
VERSION     DBBZXU010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9216
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.075"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(106..300)
                     /locus_tag="ACJJDE_001523"
     CDS             complement(106..300)
                     /locus_tag="ACJJDE_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HGG7541431.1"
                     /translation="MKHKLASWWKTIKLTANLMAGVPDYENYVAQQRKHNPNAPVMTK
                     LQFQDYCRKRRCGANGGRCC"
     gene            complement(290..2371)
                     /locus_tag="ACJJDE_001524"
     CDS             complement(290..2371)
                     /locus_tag="ACJJDE_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009267 - cellular response to starvation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation CstA family protein"
                     /protein_id="HGG7541432.1"
                     /translation="MKSLKTFLIWGIVVLVGLASFTTLALSRGEQVSAVWMVTAAISV
                     YCIAYRFYSLYIANRVMRLDPNRLTPAERHNDGLDYVPTHKGVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGTLWIIFGVVFAGAVQDMMVLFVSMRRDGKSLGDIVKQELGTVPG
                     VIASIGILMIMVIIMAVLALIVVKALVHSPWGTFTIAATMPIALFMGIYTRYIRPGKI
                     GEISIVGFILLMLAVIYGEDVAKSSIGHWFDLDGIQLTWAIMIYGFVASVLPVWLLLT
                     PRDYLSTFLKIGTIAALALGIVIVNPALQMPAVTHFIDGSGPVFSGALFPFLFITIAC
                     GAVSGFHALISSGTTPKMLENETHVRMIGYGGMLMESFVAIMALAAAASLDPGVYFAM
                     NSPAALIGTDANTAAEVITTKLQFPVDAATLLHTAKEVGENTILSRAGGAPTLAVGMA
                     HIMSRLIPGEAMMAFWYHFALLFEALFILTAVDAGTRVARFMIQDLGSIFYKPFGNTD
                     SIPANLIATFFAVALWGYFLYTGVTDPLGGINSLWPLFGIANQMLAGVALIMCAVVLI
                     KMKRDRYVWVVLVPAVGVLFVTCYAGLQKLFHSDPRISFLAHAGKYSDALAKNEILAP
                     AKDIGEMAQIIFNDKINAGLTILFLSVVVIVAAYGLRTALKARKVGWPTAKEIPAVYR
                     DGKQPEAQSEA"
     gene            2848..3228
                     /locus_tag="ACJJDE_001525"
     CDS             2848..3228
                     /locus_tag="ACJJDE_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MliC family protein"
                     /protein_id="HGG7541433.1"
                     /translation="MNIRFFALTVPVLSLAACAVPEAYDDGGRGHMPPVQNQAGTDDF
                     RAFSCENGLSVRVRHLDSGKVALRLDGRRAVLSSDVAASGERYTAEHGLFGNATEWHQ
                     KGGEAFFGFTDAYGNSVETSCRAR"
     gene            complement(3361..3855)
                     /locus_tag="ACJJDE_001526"
     CDS             complement(3361..3855)
                     /locus_tag="ACJJDE_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="contact-dependent growth inhibition system
                     immunity protein"
                     /protein_id="HGG7541434.1"
                     /translation="MIFKQNQNYWTVFYTNEEALIVQTCSGLGLTAIDHLYPPHILPL
                     DTDNETLGTTVLQALANSRTFVYDSPEDQDFFDTEKIRQRYEDWVAKLCGNLGYKTRR
                     ALFKNMMSVDIWLHNGCLKISPSRHVKLEAWDAIDADDVILSLDNSPEEIGAGLKLAL
                     SRCR"
     gene            3992..4156
                     /locus_tag="ACJJDE_001527"
     CDS             3992..4156
                     /locus_tag="ACJJDE_001527"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541435.1"
                     /translation="MYKKVFFLNDRDCARAIFRHRPDVALPDRMLQTASEGFAVLEYE
                     DDNVREIDGI"
     gene            4189..5622
                     /locus_tag="ACJJDE_001528"
     CDS             4189..5622
                     /locus_tag="ACJJDE_001528"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HGG7541436.1"
                     /translation="MNEYYQLIKHPDISLSPISDGIGVGNPATGEILAYVRNTGSDKL
                     KNLIQKAAAAQKLWAAKTALERADILWRWYFLVKENKEALARLMTMEQGKSLTESRGE
                     IDYAASFVRWFAEEARRIDGDVLTSVKASQKLVVLKQPVGVTAAITPWNFPSAMIARK
                     AAPALAVGCAMIIKPASLTPLSAYALASLAYEAGIPQDLLPVVSGRASEIGREFATNP
                     IIRKISFTGSTEVGAKIFADSAADIKKLSLELGGNAPFIVFDDADLDKAVEGALASKF
                     RNSGQTCVCTNRVYAQSGIYDEFCRKLSEKVAELKLGNGLEDGVNQGPLIEEKAVEKV
                     EQHIADALAKGASCLTGGKRSALGGTFFEPTVLSGVTAQMAVAREETFGPLCPVFRFE
                     TEAEVIEAANNTEYGLAAYLFTADTARQWRVGEALEYGMVGINTGLISNEAAPFGGVK
                     RSGLGREGSKYGADEYLELKYLCMDVG"
     gene            5731..6519
                     /locus_tag="ACJJDE_001529"
     CDS             5731..6519
                     /locus_tag="ACJJDE_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimb protein"
                     /protein_id="HGG7541437.1"
                     /translation="MMENGKTVPRWRFALKSAGWHLLISLSVAGLAALLVFKVWYPYP
                     YAELTGGLSLYQLVVAVDIVCGPLLTLILASPKKKTKARMVDFSMVGIIQLAALVYGL
                     HSVSLARPVIEAFEKDRINVVTAAEVAVEDLHKAPEGLQSLSWFGIRRIALKEPEDAD
                     EKNKTLDLSLKGIEPSMRPDRWLPYSDKEAEKIRKHLKPLKVLADARKTTVADILKQA
                     GLAEGEELYYLPFTSSRQKEWIVITDKEGNTKGYAPIDGFIITP"
     gene            6887..8443
                     /locus_tag="ACJJDE_001530"
     CDS             6887..8443
                     /locus_tag="ACJJDE_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter associated domain-containing
                     protein"
                     /protein_id="HGG7541438.1"
                     /translation="MDFSWLAEPHTWIGFATLLVLEVVLGIDNLVFVAILANKVQPAR
                     RDRARIIGLGLAVVIRIIMLAFMAHIITLTEPLFQIGGLAVSGKDMIMLAGGIFLLYK
                     ATTELHERLEGHNRFTVADNQKKHAPFWGVVAQILILDAVFSIDSVITAVAMVDHIVV
                     AMGAVVVAMAVMISASKLLTEFVDRHPTVVMLCLGFLLMIGFSLIAEAFHFHIPKGYL
                     YAAIGFSILIELFNQISQRNSRKNDYIGSSWRKRTAENVLGMMGIRESVLADAGGESG
                     DDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYSRL
                     LVVGKAGVDEPLGYINKKDLLSQLLETGGLDIQTALRQPLVLPDGTTALGALELFRQS
                     SADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALE
                     YVELASQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIE
                     RVKITKLPEE"
     gene            8460..9206
                     /gene="surE"
                     /locus_tag="ACJJDE_001531"
     CDS             8460..9206
                     /gene="surE"
                     /locus_tag="ACJJDE_001531"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HGG7541439.1"
                     /translation="MNVLISNDDGYLSEGIAVLARVTAEFANVRVVAPERDRSGVSNS
                     LTLERPLQLKQAQNGFYYVNGTPTDCIHIGQSVFSDFQADFVFSGINRGANMGDDTLY
                     SGTVAAATEAYLMGIPAVAFSLNDASGRYWATAEKALWTLLAHFFKTPPQFPILWNIN
                     IPAVAPEDVRGIKIARLGRRHHGQNVIPARNPRGEQIYWIGPVGRVSDKEEGTDFGEC
                     GAGFITVTPLQIDLTAYPDMAETAVFWHAD"
BASE COUNT         2157 a         2319 c         2613 g         2127 t
ORIGIN      
        1 cgtactgtct gcggcttcgc cgccttgtcc tgatttttgt taatccacta tattataaaa
       61 attccgtctg aagtggcgtt cagacggaat ttgtttcaag caggcttaac agcagcgtcc
      121 gccgtttgcg ccgcaacggc gcttgcggca gtagtcttga aattgcagct tggtcatcac
      181 gggggcgttg ggattatgtt tgcgctgctg tgcaacgtag ttttcataat caggcacgcc
      241 tgccatcaag tttgccgtca gcttgatggt tttccaccaa gacgcgagct tatgcttcac
      301 tttgtgcctc cggctgcttg ccgtcgcggt acaccgccgg gatttctttg gcggtcggcc
      361 agccgacttt gcgtgctttg agggcggtac gcaaaccgta cgcggcgaca atcacgacaa
      421 ccgacaagaa gaggatggtc agaccggcat taatcttgtc gttgaagatg atttgcgcca
      481 tttcgccgat gtctttggca ggcgcaagga tttcgttttt agccaatgcg tcgctgtatt
      541 tgccggcgtg ggcaaggaag ctgatgcgcg ggtcgctgtg gaacagtttt tgcaggccgg
      601 cgtagcaggt tacgaacagt acgccgacgg cgggaacgag taccacccag acataacggt
      661 cgcgtttcat cttaatcagc accacggcgc acataatcaa ggctacgcct gccagcattt
      721 ggttggcgat gccgaacaaa ggccagagcg agttgatgcc gcccaacggg tcggtcacgc
      781 ccgtgtagag gaagtagccc cacaatgcca cggcgaagaa ggtcgcaatc aggttggcgg
      841 ggatggagtc ggtgttgccg aaaggtttgt agaagatgct gcccaagtct tgaatcataa
      901 aacgtgcgac gcgcgtaccg gcatcgacgg cggtcaggat gaacaaggct tcaaacaata
      961 gggcgaagtg ataccagaac gccatcatcg cctcgcccgg aatcaggcgg ctcataatgt
     1021 gcgccatacc gactgcgagg gtgggcgcac cgcctgcacg ggaaaggatg gtgttttcgc
     1081 ccacttcctt agcggtgtgc aacagggttg ccgcatcgac agggaattgc agcttggtgg
     1141 taatcacttc ggcggcggta ttggcatccg taccgatcag ggcggcaggg ctgttcatgg
     1201 cgaagtacac gccgggatca agcgatgcgg cggcggcaag cgccataatg gctacgaaac
     1261 tttccatcaa cataccgccg taaccaatca tacggacgtg ggtttcgttt tccagcattt
     1321 tcggcgtggt gccggaggaa atcagcgcgt ggaagcccga aaccgcaccg caggcgatgg
     1381 tgatgaagag gaacgggaac aatgcgcctg agaataccgg acccgaaccg tcgataaagt
     1441 gggttacggc aggcatttgc aaagcgggat tgacgatgac gatgcccaaa gccaaggccg
     1501 caatcgtacc gattttcagg aaggtggaga gatagtcgcg cggagtgagc agcaaccata
     1561 cgggcaatac ggaggcgaca aagccgtaaa tcataatcgc ccaagtgagc tggatgccgt
     1621 caaggtcgaa ccaatgtccg atggaacttt tcgccacatc ttcgccgtaa attaccgcca
     1681 gcatcagcaa aataaagccg acgatggaaa tctcgccgat tttgcccgga cggatatagc
     1741 gcgtgtaaat acccataaac agggcaatcg gcatagtggc ggcgatggtg aacgtacccc
     1801 aagggctgtg aaccagtgct tttacgacaa tcaacgccaa caccgccata atgatgacca
     1861 taatcatcaa aataccgatg gaggcaatca cgccggggac agtgccgagt tcctgtttca
     1921 caatatcgcc caaagactta ccatcgcggc gcatagagac gaacaagacc atcatatcct
     1981 gtaccgcgcc ggcaaatacc acgccgaaga taatccacaa agtaccgggc aggtaaccca
     2041 tttgcgccgc caaaaccggg ccgaccaagg ggcccgcgcc cgcaatcgcg gcaaagtggt
     2101 gtccgaacaa tacgcccttg tgcgtcggaa cgtagtccaa gccgtcgttg tggcgttctg
     2161 ccggagtcag gcggttagga tcgagccgca tcacgcggtt ggcgatgtag aggctgtaaa
     2221 aacggtaggc gatgcagtaa acggatatgg cggcggtgac catccatacc gcgctgacct
     2281 gttcgcctcg gctgagggcc agagtggtaa aggatgctaa gccgaccagt accactatgc
     2341 cccaaatgag gaaggttttg agtgatttca tcgaataaat ccttatctca cactgtcgga
     2401 atatgcctga acggcgggaa acggccgaac catctgccgg cacgggcaca aaccggagtc
     2461 tgaatgattg acgaagtatg aaacagtgcg cttgtcggga tttgtgcctt atgcccgcat
     2521 caaacagtgc agggatgcgg gcgcacaaaa cgttaaacgc cgaatatgat tttaacgcaa
     2581 attagcacac tgatagcggt ttttacttgg aatttggaaa aaatttacat tcctccgtgc
     2641 ggacagggag gttcagacgg catcgtcagg caaaaggcgg cgccggaaga cgggtaaaga
     2701 aggggcgcgc aatccggatt attgattcat cgcgggtaaa ttctggttat cgggcttgtg
     2761 tgtttgcgcg tccgtttata gtatggcgtt gccgcagctt ggaatcaggg cggttgtttc
     2821 atatcttatt tttattgggg agcttttatg aatatcaggt ttttcgcgct gaccgtaccg
     2881 gttttgtctt tggcggcctg tgccgtgccg gaggcgtatg atgacggcgg acgagggcat
     2941 atgccgcctg ttcaaaacca agccggcacg gacgattttc gggcgttttc ctgcgagaac
     3001 ggtttgtctg tgcgggtccg ccatttggac agcggcaaag tcgcgttgcg gctagacggc
     3061 aggcgtgccg tcctctcttc cgacgttgcc gcatccggag aacgctatac cgccgaacac
     3121 ggtttgttcg gaaacgcaac cgagtggcac cagaaaggcg gcgaagcctt tttcggcttt
     3181 accgatgcct acggcaattc ggtcgaaact tcctgccgcg cccgttaaac ggggcagcct
     3241 gtttgaaccg ccgtccggat ttttcgggcg gttttttgta ccggttttgt tttggccgtc
     3301 ggctggttcc ggcggttttc gggcgtggcg gattattttt cgttttgttc cgggtttatt
     3361 ctatcggcag cggctcaatg ccaactttaa acctgctccg atttcttcag ggctgttatc
     3421 caatgataaa atgacatcgt ctgcatcaat ggcatcccac gcttccagct tgacatggcg
     3481 gctcgggctg attttcaggc agccgttgtg cagccaaata tccacgctca tcatgttttt
     3541 aaatagggcg cgtctggttt tatagcccaa gttcccgcat agcttggcaa cccaatcctc
     3601 atagcgttgc cgaatttttt cggtatcaaa aaaatcttgg tcttctggac tgtcataaac
     3661 gaaagtcctg ctgtttgcca atgcttgcaa gaccgttgtg cctaaagttt cattgtcggt
     3721 atccaatggc aggatatgag ggggatatag gtggtctatt gccgttaatc ccaaacctga
     3781 acatgtttga acaatcagag cttcttcatt cgtataaaaa actgtccaat aattttgatt
     3841 ctgtttaaaa atcattattt tatctccgta attttgactg taatgttttg acttttgcca
     3901 tactctacca cacgttgcaa ctgcaatctt tgctccttat atattgcacc ccatcaaagg
     3961 gctgcattac ttttctttct aaagattacc attgtataaa aaagtatttt tcttaaacga
     4021 cagggattgc gcccgcgcca tattcagaca ccgcccagat gttgcgctgc ccgatcggat
     4081 gcttcagacg gcatcggaag ggtttgcagt tttggaatat gaagatgata atgtccgcga
     4141 gattgacggc atttgaaagc ggttattccg cataccggag gacacgaaat gaacgaatat
     4201 taccaattaa tcaagcatcc cgatatttcc ctttccccga tttcagacgg catcggggtc
     4261 ggcaatccgg caacgggcga aattttggcg tatgtccgca atacgggttc ggacaaactg
     4321 aaaaacctga ttcaaaaggc ggcggcagcg caaaaattat gggcggcgaa aactgctttg
     4381 gaacgcgccg acatattgtg gcgttggtat tttttagtta aagaaaacaa agaagcactg
     4441 gcgcgcctga tgacgatgga gcagggcaaa agcctgaccg agtcgcgcgg cgaaattgat
     4501 tatgcggctt cgtttgtgcg ctggtttgcc gaagaggcgc ggcggattga cggcgatgtg
     4561 ttaacgagtg taaaagcgtc gcaaaaactg gttgtgttga aacagcctgt cggcgttacc
     4621 gccgcgatta cgccgtggaa cttcccatct gcaatgattg cgcgcaaggc tgcgcctgct
     4681 ttggcggtgg gttgcgcgat gatcatcaaa cccgcatcgc tcacgccttt gagtgcgtat
     4741 gccttggctt cgttggctta cgaagcgggc ataccgcagg atttgttgcc cgtcgtcagc
     4801 ggccgcgcat cggaaatcgg ccgtgaattt gccacgaacc cgattatccg caaaatcagc
     4861 ttcaccggtt cgaccgaagt cggcgcgaaa atttttgccg acagcgcggc ggacattaaa
     4921 aaactcagtt tggaactggg cggcaacgcg ccgtttatcg tgtttgacga tgccgatttg
     4981 gacaaagccg tcgaaggtgc gctcgccagc aagttccgca acagcggtca gacctgcgtc
     5041 tgcaccaacc gcgtttacgc ccaatccggc atttacgacg aattttgtcg caaattgagt
     5101 gaaaaagtag ccgagctcaa attgggcaac ggcttggagg atggcgtcaa ccaagggccg
     5161 ctgattgagg aaaaagcggt ggagaaagtc gagcagcaca tcgccgacgc gcttgctaaa
     5221 ggtgcaagct gcctgaccgg cggcaaacgc agcgcgttgg gcggaacgtt ttttgagccg
     5281 accgtcttaa gcggcgtaac ggcgcaaatg gcggtggctc gcgaagaaac cttcgggcct
     5341 ttgtgtccgg tattccgttt tgaaaccgaa gccgaagtca ttgaggctgc gaacaatacg
     5401 gaatacggtt tggctgctta cctttttacc gctgacaccg cacgccagtg gcgcgtcggc
     5461 gaagcattgg aatacggtat ggtcggcatc aatacgggct taatcagtaa tgaagcggca
     5521 ccgttcggcg gcgtgaaacg cagcggtttg ggacgtgaag gcagcaaata cggtgcggac
     5581 gaatatctgg aattgaaata tctgtgtatg gatgtcgggt gacggatgcc gtctgaacgg
     5641 cagggtttca gacggcgccg cattttaagc agtctctatc tgttgtacaa tgcgccctgt
     5701 ttttacggtt atttttgatt tgaacaagat atgatggaaa acggaaaaac agtcccgaga
     5761 tggcgttttg ccttgaaaag tgcgggctgg catctcttaa tcagcctgtc ggttgcaggg
     5821 ctggcggcat tgctggtttt taaggtttgg tatccttatc cttatgccga gctgacggga
     5881 gggctgtcgc tttatcagct ggtggtggct gtcgatattg tatgtggtcc gctgctgact
     5941 ttaattttgg caagcccgaa gaaaaagaca aaggcacgca tggtcgattt ttccatggtc
     6001 ggcatcatcc agctggcggc tttggtgtac ggtctgcaca gcgtttcttt ggcgcgccct
     6061 gtgatagagg cgtttgaaaa agacaggatt aatgttgtga ccgccgccga agtggcggtt
     6121 gaagatttgc acaaagcgcc ggaagggctg caaagcctgt cgtggttcgg catccgccgc
     6181 attgcattga aagaacctga ggatgcggat gagaagaaca agacgctgga tttgtccctg
     6241 aaaggtatcg agccgagtat gcgtcccgac cggtggctgc cgtattccga caaggaagca
     6301 gaaaaaatcc gcaaacatct gaaaccgctg aaagtcttgg cggatgcgag aaaaacgacg
     6361 gttgcggaca ttctgaaaca ggcaggtctc gccgaagggg aggagctgta ttacctgccg
     6421 tttaccagca gcaggcagaa agagtggata gtcattaccg ataaagaggg caacaccaaa
     6481 ggctacgcgc cgatagacgg cttcatcatc accccttaag cgttgggact ccgtccgcac
     6541 tcgaacatcc gttcttcgcg gcggtagaat cagactgtat ttgagagggg cgcaacccct
     6601 caatcagggc aacacatagg ggaaggcttt atgtgccgtc cgtgtgttga aacatttcaa
     6661 aataagctca tgccgtccga acatcctttc agacggtatg gcattttgcc attgccccga
     6721 taagctgtta aactatttaa attatttcga ccgaaggtac acgcacatga aagaccccga
     6781 gcagagcagc aagcccgccc gccgtttttt gtgcgtaccg tctgttcagg cagcttgagc
     6841 gcttcaggct gccttttcgc gtttgaactt gaggaatacg aaaatcatgg atttcagttg
     6901 gttggcagaa ccgcatacct ggataggttt tgccacgctt ttggtgttgg aagtcgtatt
     6961 ggggatagac aaccttgtct ttgtggcgat tttggcaaac aaggtccagc ccgcacggcg
     7021 cgaccgcgca cggattatcg ggctggggct ggcagtcgtc atccgcatca ttatgcttgc
     7081 ttttatggcg cacatcatca cgctgaccga gccgctgttc caaatcggcg gcctcgccgt
     7141 ttccggcaag gacatgatta tgctcgcggg cggtattttc ctgctttaca aagccaccac
     7201 cgaactgcat gaacgcctcg aagggcacaa ccgttttact gttgccgaca accaaaaaaa
     7261 acacgcgccg ttttggggcg tggtcgcgca aatcctgata ctggatgccg tgttttccat
     7321 cgattcggtc attactgcgg tggcgatggt cgatcatatc gtcgtggcga tgggtgcggt
     7381 cgtcgtcgca atggctgtaa tgatttctgc cagcaaactc ttgaccgaat ttgtcgacag
     7441 acaccctacc gtcgtgatgc tctgccttgg ttttttgttg atgatcggtt tcagcctgat
     7501 tgccgaagcc ttccatttcc acattcccaa aggctacctc tacgccgcca tcggcttctc
     7561 gattttaatc gaactgttta accagatttc ccagcgcaac agccgcaaaa acgactacat
     7621 cggcagctcg tggcgcaaac ggactgctga aaacgttttg ggtatgatgg gcatacgcga
     7681 aagcgtgctt gccgacgcgg gcggcgaatc cggggacgac gcgcattttg aagaaaacga
     7741 aaaatcgatg atacgcagcg tgctgacgct tgccgaacgc ccgattatgg gggtgatgat
     7801 cccacgccgc gacatcgaac ggctggacat ttcccaaagc cgcgaagaac agtgtgccca
     7861 actgcaaaac acgccttaca gccgcctgct cgttgtcgga aaggcgggcg tggacgaacc
     7921 tttgggctac atcaacaaaa aagacctgct gtcccaactg ctggaaacag gcggtctcga
     7981 cattcagacg gcattgcgcc agccgctcgt cctacccgac ggcacgaccg ccttgggcgc
     8041 gctcgaactc ttccgccaaa gcagcgcgga ttatgctttg gtggtggacg agttcggcgc
     8101 ggtattgggc atggtaacca tgaaagacct gctcgaaacc atcgcaggcg agttccccga
     8161 agaatttgag cgcgaagaag aaccagccgt tcaggggaat cccgatgaaa gcctgacggt
     8221 ggaaggcgcg ttggaatatg tggagctggc atcccaactc aatctgccgc agcaggagga
     8281 agatgccgat ttccatacgg ttgccgggct gattatggaa gaattgcaaa ccatccccga
     8341 tgtcggcgat tttgccgatt tccacggctg gcggtttgaa gtggtcgaaa aagaagggca
     8401 gcgcatcgag cgggtcaaaa tcaccaaatt gcccgaagaa taagcattca ggatagaaaa
     8461 tgaacgtttt gatttccaac gacgacggct acctctccga aggtattgcc gttttggcgc
     8521 gcgttacggc ggaatttgcc aacgtcaggg tggttgcgcc cgaacgcgac aggagcgggg
     8581 tcagcaattc gctgacgctg gaacgccctt tgcagttgaa acaggcgcaa aacgggttct
     8641 actatgtcaa cggcacgccg accgactgca tccacatcgg gcagtctgta ttttcggatt
     8701 ttcaggccga ttttgtcttt tcgggcatca accggggcgc gaatatgggg gacgacacgc
     8761 tttattcggg gacggttgcg gcggcaaccg aagcctacct tatgggcata cccgctgtgg
     8821 cgttttcctt aaacgacgct tccggacgct attgggcaac cgcagaaaag gcactgtgga
     8881 cattgttggc gcattttttc aaaacccccc cgcagttccc tattttgtgg aacatcaata
     8941 tccccgccgt cgcgccggaa gatgtgcggg gcattaaaat cgcccgtttg ggcaggaggc
     9001 atcacggtca gaacgtcatc cccgcgcgca atccgcgcgg cgaacagatt tattggatag
     9061 gcccggtagg cagggtttcc gacaaagaag agggaacgga tttcggtgaa tgcggcgcag
     9121 gtttcattac cgtaacgccg ctgcaaatcg acctgaccgc ctatccggac atggcggaaa
     9181 cagcggtgtt ctggcatgcg gactgaccgt ttcatc
//
LOCUS       DBBZXU010000076         9113 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.076, whole genome shotgun sequence.
ACCESSION   DBBZXU010000076 DBBZXU010000000
VERSION     DBBZXU010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9113
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.076"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(82..1338)
                     /locus_tag="ACJJDE_001532"
     CDS             complement(82..1338)
                     /locus_tag="ACJJDE_001532"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003752501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HGG7541440.1"
                     /translation="MNAAQLDHTAKVLAEMLTFKQPADAVLSAYFREHKKLGRQDRHE
                     IAETAFAALRHYQKISTALRRPHAQPRKAALAALVLGRSTNISQIKDLLDEEETEFLG
                     NLKARKTEFSDGLNTAAELPQWLVEQLQQHWNEEEILAFGRSINQAAPLDIRVNTLKG
                     KRDKVLPLLQAESADAEATPYSPWGIRLKNKIALNKHELFLDGTLEVQDEGSQLLALL
                     VGAKRGEIIVDFCAGAGGKTLAIGAQMANKGRIYAFDIAEKRLANLKPRMTRAGLTNI
                     HPERISSEHDTRIARLAGKADRVLVDAPCSGLGTLRRNPDLKYRQSAETVANLLEQQH
                     SILDAASKLVKPQGRLVYATCSVLPEENELQVERFLSEHPEFEPVNCAELLQSLKVDL
                     DTGKYLRLDSARHQTDGFFAAVLQRK"
     gene            complement(1686..2027)
                     /locus_tag="ACJJDE_001533"
     CDS             complement(1686..2027)
                     /locus_tag="ACJJDE_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541441.1"
                     /translation="MKNNVKNWTTKEVKQSLDKFNNILIKNTFLLQYLKKEFSASSAY
                     CLSMLPEEEDIYEILVNGNIIIDLEFNKHTNETVVINVTDVDEYLKTLTNESGRVFFT
                     LAKEIGKQKNI"
     gene            complement(2231..3088)
                     /locus_tag="ACJJDE_001534"
     CDS             complement(2231..3088)
                     /locus_tag="ACJJDE_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1853 family protein"
                     /protein_id="HGG7541442.1"
                     /translation="MNYALDALWWKLTSQPVRDLASLLTAPPLWQSGCELGVRELLGE
                     RGFRYLLALDADPAPLTEHLTRRAPFGHRLGIYAEELLAFWFANAPHAELLAHNLTVS
                     GSDGNTQGAADFVVRLNGKPYHIELTCKYYGGGTGRLEDMRGLDPKDTLLGKAAKLTA
                     QLGLPHTSDGIRTLRQHGLPLDVKPVSIVRGIGFFPHGFHAFEPPLNPYGWRGIYIQD
                     WAEYGFKRQEVRYHLLDRMAYLAPARVAETETLNATEIRRIDQGLIAVLECRPDGFWH
                     EIERIMKAV"
     gene            complement(3149..3964)
                     /locus_tag="ACJJDE_001535"
     CDS             complement(3149..3964)
                     /locus_tag="ACJJDE_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HGG7541443.1"
                     /translation="MTTLKPALPAYLDNIRIILTRTSHPANIGSAARAMKTMGLHKLT
                     IVAPNLMATPMTENPPVFDPEHPQSFKLPEESFILASGAADVLENATIAASLDEALAD
                     TTIACALTSRRREITAPLQTPRDLVSELLQTANRGEKVALVFGNETFGLSIEEVQACN
                     RLMTINGNPDYFSLNLAQAVQVVCYEIFSQTGSPMTHLQQEDHAATHEQIKGMVAHME
                     SVMNDIGFFNRRNGERLMRRMQSLFGRANTQTEDIDILRGFFNTVSHRIHKKD"
     gene            4028..4198
                     /locus_tag="ACJJDE_001536"
     CDS             4028..4198
                     /locus_tag="ACJJDE_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541444.1"
                     /translation="MPSEMFFNNVGNLTLRLKQTRVGRYFTRFGRIYPNQINSDFAAP
                     KDCASEPAVCHP"
     gene            4208..4993
                     /locus_tag="ACJJDE_001537"
     CDS             4208..4993
                     /locus_tag="ACJJDE_001537"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7541445.1"
                     /translation="MNPFLNTAFKAARRAGQMMIRAAGNLDAVKTDSKAFNDFVSDVD
                     RNSEIILVEALKEAYPHHKITCEESGSHGKAAAEYEWIIDPLDGTTNFLHGHPQYAIS
                     MALLHKGVLQEALVYAPERNDVYMASRGKGALLNDRRIRVSNRIELNRCLIGTGFPVV
                     DQSMMDKYLAILKDFLAKTAGGRREGAASLDLCAVATGRFDGFFEFNLKPWDIAAGAL
                     IVQEAGGIVTDMTGEDGWLESGDIVAANPKVLAQMLKIISAHV"
     gene            5263..7341
                     /locus_tag="ACJJDE_001538"
     CDS             5263..7341
                     /locus_tag="ACJJDE_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015343 - siderophore-iron transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015891 - siderophore transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HGG7541446.1"
                     /translation="MGKANAFTAPITVVNYDEQALNNTEARTLVDAVAKKDASVWQFG
                     GESNTLTGLYFRGYQLDARQFSVNGLAGMYGTQGTASVQVGSAQLIKGASTAVNGMNP
                     EGAVSGSVNIETKKAADEGNRKIGLGRFSNNRAQGTFDLGQRFGENKAFGVRANGKLR
                     HGDTPRHGYSEDNKEFAVNADYRGETLRVAFDSIYAKRKTNGGRARMQDIQNAGGRLF
                     GAPDGKTNLLPSWNWQNTAGQTNMLTFEWDAFDNAQITGGIGYNKARYYGTLISPTVC
                     LNATSTCTDMQNTNASGKVTARNYDYNTGTARLTDQYFRTLSMNLSARGEFETGPVTH
                     NWSTAFDRVIRQRKTINGSGNGNSKIEVKANENIANQLASFTADYPNSWENSANLDAN
                     IKVNSLALSDTLGFVDNKYRLTLGERFQTVEYTDKKSQSGDAKRFSPMLMAAWVPQPD
                     LVVYGNYMEDLEPADIKTDDSGETTMAKPRVSRQFEVGVRKNWGDFVTTLNAFQIKRP
                     GYWRGNTKKGTDFAAYKAAGGADGDEQGMERSRGIEFNAYANLLNKTLRPTFGLMYLQ
                     STVKDYPNSRDMLVNGVQVANPRVIAKAGLEWDTPFAKGLTLNSNVSYFGKSYQDTQK
                     QYAFPSYTLVDVGARYKTKLGKNTLTVSSSVENLFNKNYWQVQRGQYDRSFAVVGLPR
                     TYWLKAELDF"
     gene            7465..9015
                     /locus_tag="ACJJDE_001539"
     CDS             7465..9015
                     /locus_tag="ACJJDE_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HGG7541447.1"
                     /translation="MKKPLISVAAALLGVALGTPYYLGVKAEESLTQQQKILQETGFL
                     TVESHQYERGWFTSMETTVIRLKPELLNNAQKYLPDNLKTVLEQPVTLVNHITHGPFA
                     GGFGTQAHIETEFKYAPETEKVLERFFGKQAPVSLANTVYFNGSGKMEVSVPAFDYEE
                     LSGIRLHWEGLTGKTVYQKGFKSYRNSYDAPLFKIKLADKGDAAFEKAHFDSETSDGI
                     NPLALGSSNLTLEKFSLEWKEGVDYNVKLNELVNLVTDLQIGAFINPNGSIAPSKIEV
                     GKLAFSTKTGESGSFINSEGQFRFDTLVYGNEKYGPLDIHIAAEHLDASALTVLKRKF
                     AQISAKKMTEEQIRNDLIAAVKGEASGLFTNNPVLDIKTFRFTQPSGKIDVGGKIMFK
                     DMKKEDLNQLGLMLKKTEADIRMSIPQKMLEDLAVSQAGNIFSVNAEDEAEGRASLDD
                     INETLRLMVDSTVQSMAREKYLTLNGDQIDTAISLKNNQLKLNGKTLQNEPEPDFDEG
                     GMVSEPQQ"
BASE COUNT         2275 a         2175 c         2406 g         2257 t
ORIGIN      
        1 tttttgttaa tccactataa ttgatgaaat gccgtctgaa cgctttgaaa agggttcgga
       61 cggcattttg ttcaaaccgg tttatttgcg ttgcaatacg gcggcgaaga agccgtcggt
      121 ttggtgtcgg gcggaatcga ggcgcaggta ttttccggta tccaaatcaa ccttcaggct
      181 ttgcagcagt tcggcgcagt tgacgggttc aaattcggga tgttcggaca ggaaacgttc
      241 gacttgcagc tcgttttctt ccggcaacac gctgcaggtg gcgtacacca agcggccttg
      301 cggtttcacc agtttggatg cggcatcgag gatgctgtgt tgctgttcca aaaggttggc
      361 cacggtctcg gcggattggc ggtatttgag gtcgggattg cggcgcagcg tgcctaagcc
      421 ggagcagggc gcatccacta aaacgcggtc ggctttgcct gccagtcggg caatacgggt
      481 atcgtgttca ctgctgatgc gttcagggtg gatgttggtc agtccggcac gggtcatgcg
      541 cggtttgagg ttggcaaggc gtttttcggc gatgtcgaag gcgtagattc tgcctttgtt
      601 cgccatttgc gcgccgatgg cgagggtttt gccgcctgcg ccggcacaga aatcgacaat
      661 gatttcgccg cgttttgcgc ccaccaataa agcaagcagc tggctgcctt cgtcttggac
      721 ttccagtgtg ccgtccaaaa acagctcgtg tttgttaagc gcgattttgt ttttcaggcg
      781 gatgccccaa ggcgaataag gcgttgcctc cgcatcggca ctttcggctt gcaacaatgg
      841 cagcacttta tcgcgtttgc ctttcaaggt attgacgcgg atgtcgagcg gcgcggcttg
      901 gttgatgctg cgtccgaagg cgaggatttc ttcttcgttc caatgctgtt gcagttgttc
      961 gaccagccat tgcggcaatt ctgcggcggt attcagaccg tctgaaaact cggttttgcg
     1021 ggctttcaaa ttgccgagga actctgtttc ttcttcatca agcaggtctt tgatttggct
     1081 gatgttggtg cttctgccga gaaccagtgc ggcgagtgcg gctttgcgcg gctgcgcgtg
     1141 aggacgacgc agggcggtac tgattttttg atagtggcgc agcgcggcaa aggcagtttc
     1201 ggcgatttcg tggcggtctt ggcggccgag ttttttgtgt tcgcggaaat aggcggagag
     1261 gacggcatcg gcaggctgtt tgaaagtcag catttcagcc aaaactttgg cggtatggtc
     1321 gagttgtgcg gcgttcataa tgtaatgggt tctcttactg tgggttattc ataatcaatc
     1381 taacgtcctt aaaataacaa tagcatcttt atcattactt agtattctat ccgcaataag
     1441 aaagatgtgt taaaagtgcg caatcgggat ttgtctaaat ttctccgtta actacaaagg
     1501 cagcctgaaa aaagttctat tttcaggtcg cttgaacagc atccgatata atcacatcag
     1561 cgatttcatt ttgtaatcac tccctaaaac atgaggaaaa aaacaaaatt tattttcttc
     1621 gttcagtata tctatcctaa atatgccatc actccattga gtttttaatt tgtatttcgc
     1681 tcttgttaaa tgtttttctg tttgccgatt tcttttgcta atgtaaaaaa tactctacca
     1741 ctctcattgg ttaaagtttt caagtattca tcaacatcag taacattaat aacaactgtt
     1801 tcatttgtat gtttattaaa ttctaaatca ataataatat tcccattaac caatatttca
     1861 tatatatctt cttcttcagg gagcatagac aaacaataag cacttgaagc tgaaaactct
     1921 tttttcagat actgaagaag aaaagtattt ttaattaaaa tattattaaa tttatctaat
     1981 gattgcttga cttctttagt tgtccaattt ttaacattat tcttcattgt attctacctg
     2041 gggtcgtagt tattaaatta ccatacttat ttgtttggat cgtcataata ttagttggca
     2101 tgttgttgtt atatttatca tatccaatat ccttattaac tcggatgact ctttcataaa
     2161 ttgtatggga aatgagattt ccatcactaa gcctctcaat agatatacgc gttaatgttg
     2221 ggaaagggtt tcagacggcc ttcataatgc gttcgatttc gtgccaaaag ccgtccggcc
     2281 gacattccaa aacggcaatc aagccttggt cgatacggcg gatttcggtt gcgttcaatg
     2341 tttcggtttc ggcgacacgc gcaggcgcga ggtaggccat acggtcgagc agatggtagc
     2401 ggacttcttg gcgtttaaac ccgtattccg cccaatcttg aatatagatg ccgcgccaac
     2461 cgtatggatt aagcggtggc tcaaaagcat ggaaaccgtg tggaaaaaat ccgatgccgc
     2521 gcacgatgga aacgggtttt acgtcaagcg gcagaccgtg ttgccgcaag gttcggatgc
     2581 cgtctgaagt gtgcggcaga ccgagttggg cggtcagttt ggcggctttt cccaacagcg
     2641 tgtctttggg gtcgagtccg cgcatgtctt cgagcctgcc cgtgccgccg ccgtaatatt
     2701 tgcaggtcag ctcgatatgg tagggcttgc cgttaagcct taccacaaaa tccgccgcgc
     2761 cttgcgtatt gccgtccgaa ccggaaaccg tgaggttgtg cgcgagcagt tcggcgtgtg
     2821 gcgcgttggc aaaccaaaat gccagcagtt cttcggcgta aatgccgagg cggtgtccga
     2881 acggggcgcg tcgggtgagg tgttccgtca gcggcgcggg atcggcatcc aatgccaaaa
     2941 gatagcggaa accgcgttcc cccaatagtt cgcgcacgcc caattcgcaa ccgctttgcc
     3001 acaaaggcgg cgcagtcagc agcgaggcga ggtcgcggac gggttggctg gtgagcttcc
     3061 accataatgc gtctagggcg taattcatgc ttatccgaat atcagtcatg ccgtctgaaa
     3121 agctggaaat gttttcagac ggccttaatc agtctttttt atggatacga tggctgacgg
     3181 tattgaaaaa accgcgcagg atatcgatgt cttcggtttg cgtgttggcg cgtccgaaca
     3241 ggctctgcat acggcgcatc agacgctcgc cgttgcggcg gttgaaaaag ccgatgtcgt
     3301 tcatcacgct ttccatgtgg gcgaccatgc ctttgatttg ctcgtgggtc gcagcgtggt
     3361 cttcttgttg aagatgggtc atgggcgaac cggtttggct gaagatttcg tagcacacga
     3421 cctgcacggc ttgggcgagg ttgagcgaga aatagtcggg attgccgttg atggtcatca
     3481 gtcggttgca ggcttggact tcttcgatgc tcaagccgaa agtctcgttg ccgaaaacca
     3541 gtgccacttt ctcgcctcgg tttgcggtct gcagtaattc ggataccaaa tcgcgcgggg
     3601 tttgcagcgg cgcagtaatt tcgcggcggc ggctggtcag ggcgcaggcg atggtggtgt
     3661 cggcaagggc ttcgtccaaa gaagcggcaa tggtggcatt ttccaaaacg tctgccgcgc
     3721 cggaagcgag gatgaagctt tcttccggta atttaaacga ttgaggatgc tccgggtcaa
     3781 acacgggcgg gttttccgtc atcggcgttg ccatcagatt tggggcgacg atggtcagtt
     3841 tgtgcagacc cattgttttc atcgcgcgcg cggcagagcc gatgttggcg ggatggctgg
     3901 tgcgcgtgag gatgatgcgg atgttgtcca gataagcggg cagggcgggt ttgagagtag
     3961 tcatgttcgg ttttcggtcg gaatggaata gggtataatg cgccgtcttt ttcgttcgga
     4021 cggtcaaatg ccgtctgaaa tgttctttaa caacgtcgga aatttaacgt tgcgcctgaa
     4081 gcagacacgc gtcgggcggt attttacccg atttggcagg atttacccca accaaataaa
     4141 ctccgatttt gccgctccga aggactgcgc gtccgaaccg gcggtatgcc acccttaagg
     4201 aaatctgatg aatccgtttt tgaatacagc ctttaaagcc gcccgccgtg ccggtcagat
     4261 gatgatacgc gccgcgggca atctcgatgc cgtcaaaacc gacagcaaag cattcaacga
     4321 ttttgtttcc gatgttgacc gcaattccga aatcatcctg gttgaggctt tgaaagaagc
     4381 ctatccgcac cacaaaatca cttgcgaaga aagcggctcc cacggtaaag ccgcagccga
     4441 atacgaatgg attatcgatc cgctcgacgg cacgaccaac ttccttcacg gccatcccca
     4501 atacgccatc tctatggcac tcctgcacaa aggcgtgttg caagaagctt tggtgtacgc
     4561 ccccgaacgc aacgacgttt acatggcttc gcgcggcaaa ggcgcgttgc tcaatgaccg
     4621 ccgcatccgc gtttccaacc gcatcgaatt gaaccgctgc ctgatcggta ccggctttcc
     4681 tgttgtcgat caaagcatga tggacaagta tctggcgatt ttgaaagatt tcttggcaaa
     4741 aaccgccggc ggccgtcgtg aaggcgcggc ttctttggat ttgtgtgctg tggcgactgg
     4801 tcgttttgac ggctttttcg agttcaacct caaaccttgg gatattgccg caggcgcatt
     4861 gattgttcag gaagcgggcg gtatcgtaac cgatatgacg ggtgaagacg gctggctgga
     4921 aagcggcgat attgttgccg ccaatcccaa agtgctggcg caaatgttaa aaatcatttc
     4981 cgcacacgtt taaatttcag cccgctcccg ggaatgcggg aaaacgggcg ggtatgccgt
     5041 ctgaagtatc gcgccgatat ttcagacggc atttttactg gcagcggggg caggaaggtg
     5101 gaaacggcta aatgcccgaa actgccgaag atggaaaccc atatctgatt aaacggagaa
     5161 ccctgtacga tttgtttata gtggattaac aaaaaccagt acggtgttgc ctcgccttag
     5221 ctcaaagaga acgattctct aaggtgctga agcaccaagt gaatgggcaa agccaacgcc
     5281 tttaccgcgc cgattaccgt cgtcaactac gacgaacaag ccctcaacaa caccgaagcg
     5341 cgtactttgg tggatgccgt agcgaaaaaa gacgcttccg tttggcagtt cggcggagaa
     5401 agcaacacgc tgactggact gtatttcaga ggttatcagc ttgatgcgcg ccaattcagc
     5461 gtcaacggtt tggcaggtat gtacggcacg caaggcacgg ccagcgtgca agtcggctcc
     5521 gcacaactga ttaaaggcgc gtccaccgcc gtaaacggca tgaaccctga aggtgcggta
     5581 tccggttccg tcaatatcga aaccaaaaaa gccgccgatg aaggcaaccg caaaatcggt
     5641 ttgggccggt ttagcaacaa ccgcgcccaa ggtacgttcg atttgggtca acgcttcggc
     5701 gaaaacaaag cattcggcgt acgcgccaac ggcaaactgc gccacggcga cactccgcgc
     5761 cacggttaca gcgaagacaa caaagaattt gcggtaaatg ccgactatcg cggcgaaaca
     5821 ctgcgcgtag cgttcgattc catctacgca aaacgcaaaa ccaacggcgg tcgcgcgcgt
     5881 atgcaggaca ttcaaaacgc cggcggacgc ttgtttggcg cgcccgatgg taaaaccaac
     5941 ctgctgcctt cttggaactg gcaaaatacc gccggccaaa ccaatatgct tacgtttgaa
     6001 tgggatgcgt ttgataatgc acagattaca ggcggtatcg gctacaacaa ggcacgctat
     6061 tacggcacgc tgatttcccc gaccgtatgt ttgaatgcta ccagcacttg taccgatatg
     6121 caaaacacaa acgccagcgg caaagtaacg gcacgcaact atgactacaa taccggtact
     6181 gcgcgcctga ccgaccaata cttccgcact ttaagcatga acctgtctgc gcgaggcgaa
     6241 tttgaaaccg gcccggtaac acataactgg agtacggctt tcgaccgcgt tatccgccag
     6301 cggaaaacca taaacggcag cgggaacggc aacagcaaga tagaagtgaa ggcaaacgaa
     6361 aatattgcga atcaattggc atcgtttaca gccgactatc ccaattcttg ggagaactct
     6421 gccaacttgg atgccaatat caaagtcaac agcctggctt tgtccgacac cttgggcttc
     6481 gtggataaca aataccgcct gactttgggc gaacgtttcc aaacagtcga atataccgac
     6541 aaaaaatcac agagcggcga tgccaaacgt ttcagcccga tgctgatggc ggcgtgggtg
     6601 ccgcaacctg atttggttgt gtacggcaac tatatggaag acttggagcc tgccgacatt
     6661 aaaaccgatg attccggtga aacgacaatg gcgaaaccgc gcgtcagccg ccagtttgaa
     6721 gtgggcgttc gtaaaaactg gggcgacttt gttacgacgt tgaacgcgtt tcaaatcaaa
     6781 cgcccgggct actggcgcgg caataccaaa aaaggtactg attttgcagc atataaagca
     6841 gcaggaggcg cagacggaga tgaacaaggc atggaacgca gccgcggtat cgaattcaat
     6901 gcctatgcca acctgttaaa caaaaccctg cgcccgactt tcggcctgat gtacctgcaa
     6961 tcgaccgtga aagactaccc aaattcacgc gatatgctgg ttaacggcgt acaagtcgcc
     7021 aatccgcgcg taattgccaa ggcaggtttg gaatgggata caccgtttgc caaaggcttg
     7081 actttaaaca gcaatgtttc gtatttcggc aagtcttacc aagacacgca aaaacaatac
     7141 gccttcccat cctatacctt ggttgatgta ggcgcgcgct acaaaaccaa gctcggcaaa
     7201 aatacgttga ccgtcagcag ctcggtggaa aatctgttca acaaaaacta ctggcaggta
     7261 cagcgcggcc aatacgaccg cagcttcgcc gtcgtcggtc tgccgcgtac ttactggctg
     7321 aaggcggaat tggatttctg atttctccgc atctggaaaa tgccgtccga acaggtttca
     7381 gacggcattt cttttaaaga gatatggcgg gatacgctta aataatgcta ttctagcgtc
     7441 tttgaaacct gcttgtttga agtgatgaaa aaacctttga tttcggttgc ggcagcattg
     7501 ctcggcgttg ctttgggcac gccttattat ttgggtgtca aagccgaaga aagcttgacg
     7561 cagcagcaaa aaatattgca ggaaacgggc ttcttgaccg tcgaatcgca ccaatatgag
     7621 cgcggctggt ttacctctat ggaaacgacg gtcatccgtc tgaaacccga gttgctgaat
     7681 aatgcccaaa aatacctgcc ggataacctg aaaacagtgt tggaacagcc ggttacgctg
     7741 gttaaccata tcacgcacgg cccttttgcc ggcggatttg gcacgcaggc gcacattgaa
     7801 accgagttca aatacgcgcc tgaaacggaa aaagttttgg aacgcttttt tgggaaacaa
     7861 gctccggttt cccttgccaa taccgtttat tttaacggca gcggtaaaat ggaagtcagt
     7921 gttcccgcct tcgattatga agagctgtcg ggcatcaggc tgcattggga aggattgacg
     7981 ggaaaaacgg tttatcaaaa aggtttcaaa agctaccgca acagctatga tgcgcccttg
     8041 ttcaaaatca agctggcaga caaaggcgat gccgcgtttg aaaaagcgca tttcgattcg
     8101 gaaacttcag acggcatcaa tccgcttgct ttgggcagca gcaatctgac cttggaaaaa
     8161 ttctccctag aatggaaaga gggtgtcgat tacaacgtca agttaaacga actggtcaat
     8221 cttgttaccg atttgcagat tggcgcgttt atcaatccca acggcagcat cgcaccttcc
     8281 aaaatcgaag tcggcaaact ggctttttca accaagaccg gggaatcagg ctcatttatc
     8341 aacagtgaag ggcagttccg ttttgacacg ctggtgtacg gcaatgaaaa atacggcccg
     8401 ctggacatcc atatcgccgc cgaacatctc gatgcttctg ccttaaccgt attgaaacgt
     8461 aagtttgcac aaatttccgc caaaaaaatg accgaggaac aaatccgcaa tgatttgatt
     8521 gccgccgtca aaggcgaggc ttccggactg ttcaccaaca atcccgtatt ggacattaaa
     8581 acttttcgtt tcacacagcc gtcgggaaaa atcgatgtgg gtggaaaaat catgtttaaa
     8641 gacatgaaga aggaagattt gaaccaattg ggtttgatgc tgaagaaaac cgaagccgac
     8701 atcagaatga gtattcccca aaaaatgctg gaagacttgg cggtcagtca ggcaggcaat
     8761 attttcagcg tcaatgccga agatgaggcg gaaggcaggg caagtcttga cgacatcaac
     8821 gagaccttgc gcctgatggt ggacagtacg gttcagagta tggcaaggga aaaatatctg
     8881 actttgaacg gcgaccagat tgatactgcc atttctctga aaaacaatca gttgaaattg
     8941 aacggtaaaa cgttgcaaaa cgaaccggag ccggattttg atgaaggcgg tatggtttca
     9001 gagccgcagc agtaatgggt caaatgccgt ctgaaatgtt caggcggcat tttgttgtat
     9061 tggaaactgc cgttttcaac cattccttta gataagccgt gtcggattcg ttt
//
LOCUS       DBBZXU010000077         9023 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.077, whole genome shotgun sequence.
ACCESSION   DBBZXU010000077 DBBZXU010000000
VERSION     DBBZXU010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9023
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.077"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..570
                     /locus_tag="ACJJDE_001540"
     CDS             <1..570
                     /locus_tag="ACJJDE_001540"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7541448.1"
                     /translation="FHFRKTEKECAVLGTLSRLDTVRAVHLMLDILKKMVDCGMPVRL
                     NIAGIGEEMDNLKAQAERLGIDDKVTFLGGIRDLTGYFKEIDILVNTPHCVGDHGAGV
                     GNNILEAGLYDTPVVTYDMAGISEMVITGRTGYCIPFGDEEAFIAAVDTLVRQPELRE
                     AMGKRLHAHVAALCSDDEIYRTTMAAYAM"
     gene            590..1757
                     /locus_tag="ACJJDE_001541"
                     /pseudo
     CDS             590..1757
                     /locus_tag="ACJJDE_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981110.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            1750..2277
                     /locus_tag="ACJJDE_001542"
                     /pseudo
     CDS             1750..2277
                     /locus_tag="ACJJDE_001542"
                     /inference="COORDINATES: protein motif:HMM:NF014453.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transferase"
     gene            2326..3327
                     /locus_tag="ACJJDE_001543"
     CDS             2326..3327
                     /locus_tag="ACJJDE_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009174623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-grasp domain-containing protein"
                     /protein_id="HGG7541449.1"
                     /translation="MPYFTGNQTNEKNNILILSAGRRVELVQDFQTEAARFSDGISVF
                     ATDLNPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLAD
                     ERERFEAASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPY
                     DGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAI
                     PRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEI
                     NPRFGGGFPLTYAAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND"
     gene            3314..4000
                     /locus_tag="ACJJDE_001544"
     CDS             3314..4000
                     /locus_tag="ACJJDE_001544"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7541450.1"
                     /translation="MKTINPETTVIVFDLDDTLYSEYEYKLSGIRSVIDTVAALYPDW
                     NSDNLWRNIDPDGKDWLDKLCRHCGFNESEKQVLLWQYRLHRPTLTPYAPPDFLSELT
                     APFAARALITDGRSLTQRLKLEALGLSSLFDDILISEACSSEKPDGKRFRHLQDKYAD
                     KAGCFIYIGDNISKDFIAPNTLGWITIGLLPSGQNIHRHQPESFNTEYHPDFWVNSLQ
                     DLVPIIDSNT"
     gene            complement(4265..4429)
                     /locus_tag="ACJJDE_001545"
     CDS             complement(4265..4429)
                     /locus_tag="ACJJDE_001545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541451.1"
                     /translation="MPSEGGVFRGIGRAPQVLSKSVCTGVHSGLNLNQYGVASPCRTI
                     CTVCGFVALS"
     gene            4470..5645
                     /locus_tag="ACJJDE_001546"
     CDS             4470..5645
                     /locus_tag="ACJJDE_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HGG7541452.1"
                     /translation="MLNTSLSPWPCFTQEEADAVSKVLLSNKVNYWTGSECREFEKEF
                     AAFAGTRYAVALSNGTLALDAALKAIGIGEGDDVVVTSRTFLASASCIVNAGANPVFA
                     DVDLNSQNISAETVKAVLTPNTKAIIVVHLAGMPAEMDDIMALAKEHDLWVIEDCAQA
                     HGAKYKGKSVGSIGHVGAWSFCQDKIMTTGGEGGMVTTNDKTLWEKMWSYKDHGKSYD
                     AVYHREHAPGFRWLHESFGTNWRMMEMQAAIGRIQLKRLPEWTACRQAHAAKLAESLG
                     KFKSIRLVEVADYIGHAQYKFYAFVKPEHLKDGWTRDRIVSELNARKVPCYQGSCSEV
                     YLEKSFDDTPWRPKERLKNAVELGDTSLMFLVHPTLTDDEIAFCKEHIEAVLVEATR"
     gene            5693..7603
                     /gene="pglD"
                     /locus_tag="ACJJDE_001547"
     CDS             5693..7603
                     /gene="pglD"
                     /locus_tag="ACJJDE_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-dependent dehydratase PglD"
                     /protein_id="HGG7541453.1"
                     /translation="MTLETLIALPRNIKKICFLIHDFLMIFIAFWFTQSLKADYSNEW
                     FDPANWQSFLLTAFLTACLFFRMGLYRAVTRFISFRILSTALAGSLASAVLFFLNTLI
                     FEERLRLALPIVYFLLLFVSVTGSRMVLRGLLSEHPKKQMAPVIIYGAGQAGRQLLEA
                     VKQMREYSAAAFVDDDPKLWRTVICGLAVYRPDDIAALIGRYGVEKILLAIPSATQEQ
                     RRRIINKLEAYPCEVLTIPGMKDLMDGKISIGTLKKISVSDLLGRDSVTPDDRLMSAD
                     IEGKTVMVTGAGGSIGSELCRQIIRRRPEKLLLFELSEFALYAVEKELRETCIQKRLD
                     TEILPFLGSVQNRTLLEHVMTAFSVATVYHAAAYKHVPMVEFNTVEGIRNNIFGTLEC
                     ALAATASGVETFVLISTDKAVRPTNTMGASKRMAELCLQALAAEPGQKTRFSMVRFGN
                     VLGSSGSVVPLFEKQIAEGGPLTLTHPDITRYFMTIPEAAQLVIQAGAMGTGGDVFVL
                     DMGESVKIIDLARQMITLSGLKPKTPEQPDGDIEILITGLRPGEKLYEELLIGDNVRK
                     TGHPRIMTADEAMLPWHELSVLLDRIRAACDRYDQQAIRTLLINAPTGFAPSDGICDL
                     LWVRETHRKNAV"
     gene            7659..8951
                     /locus_tag="ACJJDE_001548"
     CDS             7659..8951
                     /locus_tag="ACJJDE_001548"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HGG7541454.1"
                     /translation="MQFSAFGEKFTQHSGILQLMDDLGDALKSDKPVNMLGGGNPARI
                     PEIDRAFADIFSKLAAEHAVENIGNYSNPQGDAALIDALTAFLNREYGWNLTADNIAL
                     TNGSQNAFFYLFNLFGGKFKLSDGTSAEKAILLPLAPEYIGYADVHIEGQHFVSAKPK
                     IENVEHEGEAGFFKYRVNFDALENLPELKEGKIGAICCSRPTNPTGNVLTDGEMARLD
                     ALAQKHGIPLIIDNAYGMPFPNIIYSDVTLNWHENIILCFSLSKVGLPGVRTGIIVAA
                     PEVVKAVSSLNAIVNLAPTRFGAAIAAPLLESGEMKRLADQVIRPFYRNQAQTAVSLL
                     KRELGAYPMKIHKPEGAIFLWLWFENLPVSSQTLYEILKAEGTLIIPGEHFFIGIDTQ
                     DYPHAGECIRMSIAQDAQTLEKGIAAIGKTVRKLYDNV"
BASE COUNT         2242 a         2725 c         2181 g         1875 t
ORIGIN      
        1 tttcatttcc ggaaaaccga aaaagaatgc gccgtactcg gcacgctttc ccgtttggac
       61 accgtccgcg ccgtgcatct gatgttggat attttgaaga aaatggttga ctgcggtatg
      121 cccgtccgcc tcaacatagc gggcatagga gaagaaatgg acaatttgaa agcgcaggcg
      181 gaacgtttgg gcatagatga caaagttacc ttcctcggcg gcatacgcga cttgaccggc
      241 tacttcaaag aaatcgatat tttggtgaac acgccgcatt gcgtgggcga ccacggcgca
      301 ggtgtcggca acaacatctt ggaagccggc ctttacgaca cgcccgtcgt tacctacgat
      361 atggcgggca tttccgaaat ggtcattacc ggccgaaccg gctactgcat ccccttcggc
      421 gacgaagaag cctttatcgc cgccgtagac acgctcgtca gacaaccgga gttgcgcgaa
      481 gcaatgggca aaaggctgca cgcacacgtc gccgcactct gttccgacga cgaaatctac
      541 cgtaccacca tggcggcgta tgccatgtaa tgccgtctga aagccgccga tgaacatcac
      601 catagtcgcc ccctactgct cgctgccgtc cgaaccgtat ttcaaccgct tttggtatct
      661 ggcagaacga ttgtcgcaat cgcacgacgt gttgctgatt accagccgtt tccgccacta
      721 cgacaaatcc ttcagacggc ccgaagatgc cgaggccgcc tcgcaagacc gtctgaaagt
      781 catgctgttg gaagaaagcg gctacggcaa aaacgtgtct ttagaacgtg ttgccagcca
      841 ttaccgcttc gtcaaaaatt ttgagcaatg gctgaaaaac tgccggccgg gcgaacaaga
      901 catcgtctat tccgcctatc cgctgattgc caccaacctg ctgttgggca aacacaaagc
      961 gcgtttgggc tacaaactga ttgtcgatgt gcaggacgta tggccggagt ctttctcctc
     1021 ggtcgtaccg tttttgaaaa aagtaccgca caagctgctg ccctttgctt cacgcgccaa
     1081 ccgtgcctac cgctgcgccg acgcgctggt tgccgtatcg cagacttatc tcgaccgcgc
     1141 caaagaagcc aatccgaacg tacccggcga agccgtctat atcggtacgg attttgccgc
     1201 catcgccccc ccccccgcga ttccgctcca aaaccgtccg ccttttctac ttgggcacgc
     1261 tcagttacag ctacgacgtg gaaaccgtgt gcaaaggtgt tcggaaactt ttagacgacg
     1321 gcgaaaacgt cgaattgcac attatgggcg gaggacccga tttggagaaa ctcaaacaat
     1381 atgaaaatcg cgccatcaag ttttacggtt atttacccta ttctgaaatg atgtcgattg
     1441 ccaaaggctg cgacattgcc gtcaacgcca tccatagcca cgccatgcag tcggttacca
     1501 acaaactctc cgactatatg gctttgcaaa aaccgattct gaacagtcag aacaatgccg
     1561 aagtcctcga cctcatgaat ctgctgccgc acgaaaacta ccgttccggc gatgtggacg
     1621 gtttcgttca agccgccaaa gatattttga agcgcaaaag cgatcctgtt cagtccgacg
     1681 aaatcgtccg ccgcttcaaa cgcgatgtgg cgtatcagaa aatcgtcaac ctgattgaaa
     1741 gattagctca tgaataaatt tttcaaacgc ctgttcgaca tcatcgcctc cgcatcgggg
     1801 ctgattgtcc tctcacccgt tttcctgatt ttggcgtacc tcatccgcaa gaatctaggt
     1861 tcgcccgtct tcttcattca agaacgcccc ggaaaggacg gaaaaccttt taaaatggtc
     1921 aaattccgtt ccatgcgcga cgcgcttgat tcagacggca ttccgctgcc cgacagcgag
     1981 cggctcacac ccttcggcaa aaaactgcgt gccgctagtt tggacgaact gcctgaatta
     2041 tggaatgtct taaaaggcga catgagcctg gtcggcccgc gcccgctttt gacgggctac
     2101 ctgccgcttt ataacgactt ccaaaaccgc cgccacgaaa tgaaaccggg cattaccggc
     2161 tgggcgcagg tcaacgggcg caacgcgctt tcgtgggacg aaaagttcgc ctgcgatgtt
     2221 tggtacaccg acaacttcag cttttggctg gatatgaaaa tcctgttttt gacagtcaaa
     2281 aaagtcttga tcaaagaagg catttcggcg gaaggggaag ccactatgcc ttatttcact
     2341 ggaaatcaaa ctaatgaaaa aaataatata ctgattctgt cggcaggtcg ccgtgtcgaa
     2401 ttggtgcagg acttccaaac cgaagccgca cgtttttcag acggcatcag cgtttttgcc
     2461 actgacctca acccccgcat gtcttctgcc tgccatgttt cggacggttc atttgaagtg
     2521 ccgccgatta gtgccgattc atatatcgac agcattttca atctggcggt acgcgaaaat
     2581 atcggtttaa tcatcccaac catagacacc gaactgcaaa agctggcaga cgagcgcgaa
     2641 cgctttgaag cggcaagtgt ccacatcgtc gtttccgatt cggacttcat cgcacaatgc
     2701 cgcgacaaac ggaaaaccgc caccttgttt gcccgctacg gcatacgctc acccgaaatt
     2761 tacgaccgca agaagttggt tttcccttgc ttcgccaagc cttatgacgg cagccgcgcc
     2821 atcggtgcaa aacggattga cacacctgcc gacctgacac cggaagtctt ggcagacacc
     2881 aaattaatgt tctgtcagtt tatcgacatc gaaaataaat tttccgagtt taccgtcgat
     2941 atgtattacg accgtcaatg ccgtctgaaa tgcgccatcc cgcgaaaacg cttggaagtg
     3001 cgctccggcg aaatcagcaa aggcgttacc tgcaaaaaca gcctctacca aacgctgctg
     3061 gaaaaaatgt cggtattgca gggcgcgcgc ggctgtatca cggcgcagtt cttctacaac
     3121 gaagaaaccg gcgaattcta cggcgtggaa atcaaccccc gcttcggcgg tggcttcccg
     3181 ctgacgtatg ccgcaggcgg caattatccg agccggttga tgcgcgaata cctcggcgac
     3241 gaagaaatcc cgttttcaga cgactgggaa aacaacctca ttatgttgcg ctacgatgcc
     3301 aaggtcttgg ttcatgaaaa cgattaatcc tgaaaccacc gtcatcgtct tcgacttgga
     3361 cgataccctg tattcggaat acgaatacaa gctctccggt atccgttcgg tcatcgatac
     3421 cgttgccgca ctgtatcccg attggaattc agacaaccta tggcgcaaca tcgaccccga
     3481 cggcaaagat tggctggaca aattgtgccg ccactgtggt tttaatgaat cggaaaaaca
     3541 ggttcttttg tggcaatacc ggctgcaccg cccgacgctg actccgtatg ctccgccgga
     3601 tttcctgtcc gaactgaccg cgcccttcgc cgcacgcgcg ctgattaccg acggcagaag
     3661 cctgacccaa cgcctgaagc tggaagcctt gggtctgtct tccctgtttg acgacatcct
     3721 catctctgaa gcctgctctt cggaaaagcc cgacggcaaa cgcttccgcc atcttcaaga
     3781 caaatatgcc gacaaggcag gctgcttcat ctatatcggc gacaacattt ccaaagactt
     3841 tatcgcgccg aacactttgg gctggataac cataggattg cttccctccg gacagaacat
     3901 ccaccgccac cagcctgaaa gttttaacac agaatatcat cccgactttt gggttaactc
     3961 ccttcaagat ttagttccta taattgattc aaatacttaa ccattacata atcaaacatg
     4021 cactcacaat attaaaagga ctatttcatg acaaaatatt attcatgggg cgtaaacggc
     4081 tttccgccct acgttttcga caccatttgg aaacgatgga agttgaatgg gcgcgggggc
     4141 ggttatcgtg tgcgacatcc cggacggcat gaccgtcgcg ggcaatccgg caaagccgct
     4201 gccgcgcaaa aaccccaaga ccgggacggc ataagcgatt aaaatatagt ggattaaatt
     4261 taaatcagga caaggcgacg aagccgcaga cagtacaaat agtacggcaa ggcgaggcaa
     4321 cgccgtactg gtttaaattt aatccactat gcacccccgt acagaccgat tttgacaaca
     4381 cctgcggcgc gcgcccgatt cctcgaaaca cgcccccttc agacggcata gggtcggaaa
     4441 tgccgtctga acccgacgga caaaccatca tgttgaacac ttccctttcc ccgtggccct
     4501 gcttcaccca agaagaagcc gatgccgttt ccaaagtcct cttgtccaac aaagtcaatt
     4561 actggacggg cagcgaatgc cgcgaatttg aaaaagaatt tgccgccttt gccggcacgc
     4621 ggtacgccgt cgccctttcc aacggcacgc tggcactcga tgccgcgctc aaagcaatcg
     4681 gcataggcga gggcgatgat gtggttgtta cctcgcgcac cttcctcgcc tccgcgtcct
     4741 gcatcgtgaa cgcgggcgca aaccccgtgt ttgccgacgt ggatttgaac agccaaaaca
     4801 tcagcgcgga aaccgtcaag gctgtgctga ccccgaatac caaagcgatt atcgtggttc
     4861 accttgccgg tatgcctgcc gaaatggacg acatcatggc tttggcaaaa gaacatgatt
     4921 tgtgggtaat tgaagactgc gcccaagcgc acggcgcaaa atacaaaggc aaatccgtcg
     4981 gctctatcgg acacgtcggc gcgtggtcgt tctgccaaga caaaatcatg accaccggcg
     5041 gcgaaggcgg tatggttacg accaacgaca aaaccctgtg ggaaaaaatg tggtcgtaca
     5101 aagaccacgg caaaagctac gatgccgtgt accaccgcga acacgcgccc ggtttccgct
     5161 ggctgcacga aagtttcggc acaaactggc gtatgatgga aatgcaggcg gcaatcgggc
     5221 gcatccagct caaacgcctg cccgaatgga ctgcctgccg tcaagcgcac gccgccaagc
     5281 tggcggaaag cctaggcaaa ttcaaaagta tccgcttggt tgaagtcgcc gactacatcg
     5341 gacacgcgca atataagttc tacgctttcg tcaaacccga acacctcaaa gacggctgga
     5401 cgcgcgaccg catcgtcagc gaactgaacg cgcgcaaagt cccctgctat caaggcagct
     5461 gctccgaagt ctatttggaa aaatctttcg acgacacgcc ttggcggccg aaagagcgtt
     5521 tgaaaaatgc tgtcgaactg ggcgacacca gcctgatgtt cttggtgcac ccgacgctga
     5581 ccgacgacga aatcgcgttc tgcaaagaac acatcgaagc cgtattggta gaagccacac
     5641 gataaccctt cagacggcat atgccgcctg aaagcacata ccgccccacg atatgactct
     5701 ggaaaccctg atcgccctgc cgcgcaacat caagaaaatc tgtttcctca tacacgattt
     5761 tctgatgatt ttcattgcat tctggttcac ccaaagccta aaggccgact actcgaacga
     5821 atggttcgac cccgccaact ggcagtcttt cctattgacc gcgtttttga ccgcctgcct
     5881 gttcttcaga atggggcttt accgcgccgt cacacgcttc atcagcttcc gcatcctctc
     5941 caccgcgctg gcaggcagcc tcgcctccgc cgtattgttt ttcctcaata cgctgatatt
     6001 tgaagaacgg ctgcggctcg ccctgccgat tgtctatttc ttactgctgt ttgtttccgt
     6061 gaccggctcg cgtatggttt tgcgcggact gttgtccgaa caccccaaaa aacagatggc
     6121 ccccgtcatt atttacggcg cagggcaggc gggcagacag cttctcgagg ccgtcaaaca
     6181 aatgcgcgaa tattccgccg ccgcctttgt ggacgacgac cccaaactgt ggcgcaccgt
     6241 catctgcggc cttgccgttt accgccccga cgacatcgcc gccctcatcg gacgctacgg
     6301 cgtggaaaaa atcctgctcg ccattcccag cgcgactcag gaacaacgcc gccgaatcat
     6361 caacaaactg gaagcctatc cgtgcgaagt gttgaccatt cccggaatga aagacctgat
     6421 ggacgggaaa atcagcatcg gcacgctcaa aaaaatctct gtgtccgacc tgctcgggcg
     6481 cgattccgtc acacccgacg accgcctgat gagtgccgac atcgaaggta aaaccgtcat
     6541 ggtaaccggc gcgggcggct ccatcggttc ggaactctgc cgccagatta tccgccgccg
     6601 ccccgaaaag ctgctgctgt tcgagttatc cgaattcgcc ctgtacgccg tcgaaaaaga
     6661 attgcgcgaa acctgcatcc aaaaacgcct cgacaccgaa atcctgccct ttctcggttc
     6721 ggtgcaaaac cgcacgctgc tcgaacacgt catgaccgcc ttttccgttg cgaccgtcta
     6781 tcacgccgcc gcctacaaac acgtccccat ggtcgagttc aacaccgtcg aaggcatacg
     6841 caacaacatc ttcggcacac tcgaatgcgc gcttgccgcc acggcttcgg gcgtggaaac
     6901 cttcgtcctc atctccaccg acaaagccgt ccgccccacc aacacgatgg gcgccagcaa
     6961 acgtatggcg gaactctgcc tacaggcgct cgccgccgaa cccggacaaa aaacccgctt
     7021 cagcatggtg cgtttcggca atgttttagg ctcgtccggc tccgtcgtcc cgctgtttga
     7081 aaaacagatt gcagaaggcg gcccgcttac cctgacccac cccgacatca cacgttattt
     7141 catgaccata cccgaagccg cccaactcgt catacaggca ggcgcgatgg gtactggcgg
     7201 cgacgtattc gtcctcgata tgggcgaatc cgtcaaaatc atcgaccttg cccgccaaat
     7261 gattacctta agcggcctca aacccaaaac acccgaacaa cccgacggcg acatcgaaat
     7321 cctcattacc ggactgcgtc ccggcgaaaa actctacgaa gagctgctca tcggcgacaa
     7381 cgtccgcaaa accggccatc cgcgcattat gacggctgac gaggcgatgc tgccgtggca
     7441 cgagctctct gtcctgctcg accgcatccg tgcggcctgc gaccgttacg accagcaggc
     7501 aatccgcacc ctgctcatca acgccccgac cggctttgcc ccgagcgacg gtatctgcga
     7561 cctgctttgg gtacgagaaa cacacagaaa aaatgccgtc tgaaccttca gacggcataa
     7621 cgtacaaacc aacctacctt acacacacgg agtttgacat gcagttttcg gcattcggcg
     7681 aaaaattcac gcaacacagc ggcatcctcc aactgatgga cgacctcggc gacgcgctca
     7741 aaagcgacaa gcccgtcaac atgctcggcg gcggcaaccc ggcgcgcatt ccggaaatcg
     7801 atcgggcgtt tgccgacata ttctccaaac tggcggcaga acacgccgtc gaaaacatcg
     7861 gcaactactc caatcctcaa ggagatgccg cgctgattga cgcgctaacc gccttcctca
     7921 accgcgaata cggctggaac ctgaccgccg acaatatcgc gctgaccaat ggttcgcaaa
     7981 acgcgttttt ctatttattc aacctcttcg gcggcaaatt caagctttca gacggcacat
     8041 ccgcagaaaa agccattttg ttgccgctcg cgcccgaata catcggctat gccgacgtgc
     8101 atatcgaagg gcagcacttc gtttccgcca aacccaaaat cgaaaacgtc gaacacgaag
     8161 gcgaagcagg cttcttcaaa taccgcgtga actttgacgc actggaaaac ctgcccgagc
     8221 tgaaagaagg caaaatcggc gcgatttgct gttcgcgccc gaccaacccg accggcaacg
     8281 tgctgaccga cggcgaaatg gcgcgtttgg acgctttggc gcaaaaacac ggcattccgc
     8341 tgattatcga caacgcctac ggaatgccgt tccccaacat catttacagc gacgtaacgc
     8401 tgaattggca tgaaaacatc atcctctgct tcagcctttc caaagtcggt ctgccgggcg
     8461 tgcgcaccgg catcatcgtc gccgcgcccg aagtcgtcaa agccgtcagc agcctgaacg
     8521 cgattgtgaa ccttgccccc acgcgcttcg gcgcggccat cgccgccccg ctgctggaaa
     8581 gcggcgagat gaaacggctt gccgaccaag tcatccggcc gttttaccgc aatcaggcgc
     8641 aaaccgccgt ctcgctgctc aagcgcgagc tgggcgcgta cccgatgaaa atccacaaac
     8701 ccgaaggcgc gattttcctg tggctctggt ttgaaaacct gcccgtttct tcgcaaaccc
     8761 tgtacgaaat actcaaagcc gaaggcacgc tgattattcc gggcgagcat ttcttcatcg
     8821 gcatcgacac gcaggattac ccgcacgcgg gcgagtgcat ccgcatgagc atcgcgcagg
     8881 acgctcaaac gctggaaaaa ggcattgccg ccatcggcaa aaccgtccga aaactgtacg
     8941 acaacgttta aaacgcaaaa aaatgccgtc tgaaaagttt tcagacggca tgagaccttt
     9001 gcaataacat aggttactaa aat
//
LOCUS       DBBZXU010000078         9003 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.078, whole genome shotgun sequence.
ACCESSION   DBBZXU010000078 DBBZXU010000000
VERSION     DBBZXU010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 9003)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9003)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9003
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.078"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(20..367)
                     /locus_tag="ACJJDE_001549"
                     /pseudo
     CDS             complement(20..367)
                     /locus_tag="ACJJDE_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(431..817)
                     /locus_tag="ACJJDE_001550"
                     /pseudo
     CDS             complement(431..817)
                     /locus_tag="ACJJDE_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251873.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(858..1232)
                     /locus_tag="ACJJDE_001551"
                     /pseudo
     CDS             complement(858..1232)
                     /locus_tag="ACJJDE_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009349130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(1465..1812)
                     /locus_tag="ACJJDE_001552"
                     /pseudo
     CDS             complement(1465..1812)
                     /locus_tag="ACJJDE_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247143.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(2026..2235)
                     /locus_tag="ACJJDE_001553"
                     /pseudo
     CDS             complement(2026..2235)
                     /locus_tag="ACJJDE_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573675.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
     gene            complement(2264..2593)
                     /locus_tag="ACJJDE_001554"
     CDS             complement(2264..2593)
                     /locus_tag="ACJJDE_001554"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HGG7541455.1"
                     /translation="MGGLIIEDLQEGFGKEAVKGKEITVHYTGWLEDGTKFDSSLDRR
                     QPLTITLGVGQVIKGWDEGFGGMKESGKRKLTIPSEMAYGAHGAGGVIPPHATLIFEV
                     ELLKVYE"
     gene            complement(2671..2889)
                     /locus_tag="ACJJDE_001555"
     CDS             complement(2671..2889)
                     /locus_tag="ACJJDE_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2061 domain-containing protein"
                     /protein_id="HGG7541456.1"
                     /translation="MLKTLTFAALHFSTAFSITYVLTGSIGISGAVALVEPLINTVVF
                     YFHEKAWNLYEKNKTVQQTQPFQLHRCS"
     gene            3011..3964
                     /locus_tag="ACJJDE_001556"
     CDS             3011..3964
                     /locus_tag="ACJJDE_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase"
                     /protein_id="HGG7541457.1"
                     /translation="MNQKKVVVLDADTLPGRTFHFDFPHELAVYGTTDAAETAGRVRD
                     AHIIITNKVMISADIIAANPQLELIAVSATGVNNVDIGAAEAAGVAVCNVRAYGNESV
                     AEHAFMLMIALMRNLPAYQRDVAAGLWEKSPFFCHYGAPIQDLNGKTLAVFGRGNIGR
                     TLAGYAQAFGMGVVFAEHKHAPAVREGYVAFENAVRTADVLSLHCPLNAQTENMIGEN
                     ELRQMKPGAVLINCGRGGLVDENALLAALKYGQIGGAGVDVLTNEPPKNGNPLLKARL
                     PNLIVTPHTAWASREALDRLFDILLANIHAFVKGEAQNRVV"
     gene            complement(4038..6095)
                     /gene="metG"
                     /locus_tag="ACJJDE_001557"
     CDS             complement(4038..6095)
                     /gene="metG"
                     /locus_tag="ACJJDE_001557"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HGG7541458.1"
                     /translation="MTRKILVTSALPYANGSIHLGHMVEHIQTDVWVRFQKLRGNECY
                     YCCADDTHGTPVMLAAQKQGIAPEDMIAKVREEHLADFTGFNIGYDNYYSTHSPENKQ
                     FSQDIYRALKANGKIESRVIEQLFDPEKQMFLPDRFVKGECPKCHAQDQYGDNCEVCG
                     TTYSPTELINPYSAVSGAKPELRESEHFFFKLGECADFLKAWTSGNNPHDGKPHLQPE
                     ALNKMKEWLGEGEETTLSDWDISRDAPYFGFEIPDAPGKYFYVWLDAPVGYMASFKNL
                     CDRIGIDFDEYFKAGSQTEMYHFIGKDILYFHALFWPAMLHFSGHRAPTGVYAHGFLT
                     VDGQKMSKSRGTFITAKSYLEQGLNPEWMRYYIAAKLNSKIEDIDLNLQDFISRVNSD
                     LVGKYVNIAARASGFIAKRFEGKLKDVSDSALLAKLTAQSEAIAECYENREYARALRD
                     IMALADIVNEYVDANKPWELAKQEGQDERLHEVCSELINAFTMLTAYLAPVLPQTATN
                     AARFLNLDAITWTNTRVTLGKHAINKYKHLMQRVEQKQVDDLIEANKQSIAAAAAPAA
                     EESKYEKVAEQASFDDFMKIDMRVAKVLNCEAVEGSTKLLKFDLDFGFEKRIIFSGIA
                     ASYPNPAELNGRMVIAVANFAPRKMAKFGVSEGMILSAATAEGKLKLLDVDAGAQPGD
                     KVG"
     gene            complement(6211..8049)
                     /gene="glmS"
                     /locus_tag="ACJJDE_001558"
     CDS             complement(6211..8049)
                     /gene="glmS"
                     /locus_tag="ACJJDE_001558"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004360 - glutamine-fructose-6-phosphate
                     transaminase (isomerizing) activity [Evidence IEA];
                     GO_process: GO:1901137 - carbohydrate derivative
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HGG7541459.1"
                     /translation="MCGIVGAIRAHHNVVDFLTDGLKRLEYRGYDSSGIAVNTDGKIK
                     RVRRVGRVQLMEDAAREKGIAGSIGIGHTRWATHGGVTEPNAHPHISGGMIAVVHNGI
                     IENFESERKRLEGLGYRFESQTDTEVIAHSINHEYAQNGGRLFEAVQEAVKRFHGAYA
                     IAVIAQDKPDELVVARMGCPLLVALGDDETFIASDVSAVIAFTRRVAYLEDGDIALLA
                     SDGIKRLTDKSGLPAERKVKVSELSLASLELGPYSHFMQKEIHEQPRAIADTAEVFLD
                     GGFIPENFGKNAKSVFESIRSVKILACGTSYYAALTAKYWLESIAKIPADVEIASEYR
                     YRSVIADPDQLVITISQSGETLDTMEALKYAKSLGHRHSLSICNVMESALPRESSLVL
                     YTRAGAEIGVASTKAFTTQLVALFGLAVTLAKVRGLVSEEDEARYTEELRQLPGSVQH
                     ALNLEPQIAAWAQQFAKKTSALFLGRGIHYPIALEGALKLKEITYIHAEAYPAGELKH
                     GPLALVDENMPVVVIAPNDSLLDKVKANMQEVGARGGELFVFADLDSNFNATKGVHVI
                     RAPRHVGKLSPVVHTIPVQLLAYHTALARGTDVDKPRNLAKSVTVE"
     gene            8155..8280
                     /locus_tag="ACJJDE_001559"
     CDS             8155..8280
                     /locus_tag="ACJJDE_001559"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541460.1"
                     /translation="MPSEGLGLLKKGRDFPVYPRWAFRRHCLPPVYSFYKSILTS"
     gene            8331..8852
                     /locus_tag="ACJJDE_001560"
     CDS             8331..8852
                     /locus_tag="ACJJDE_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541461.1"
                     /translation="MKQMLLAVGVAAVLAGCGKDAGGYEGYWREKSDKKEGMIAVKKE
                     KGNYFLNKINVVTGKEESMLLSEKDGELSINTGIGEIPIKLSDDGKELYVERRQYVKT
                     DAAMKDKIIAHQKKCGQTAQAYRDARNALPSNQTYQQHLAAIEQLKRRFEAEFDELEK
                     EIKCNGRSPALLL"
BASE COUNT         1834 a         2094 c         2709 g         2366 t
ORIGIN      
        1 ggttcgtggg aatgacggtt taggtatttt tattgaaagc cgtaggtggt gtttctatgc
       61 aaacgacaga tgaatcatcg cggcaggttg acggcaggtg cttggtgtcg atctttttgt
      121 cgttggcggc ggtgtcggct ttgacggcgt cgtcggcggt ggctttggcg ttgtcgcgcg
      181 taaccggctg tccgcagaac cattttaccg aaccggcttg acgcttggcc cacagggaga
      241 gttttttgtc tttgatttcg ttgtttacgt tgcttgaaag cattgtggcg gtaacgacgc
      301 cgtttttgac ttcaactttc tcaacatatt tgcctttaat gtcggtggag gttgccacgc
      361 cggcggcatc attaaatccc gtcattccca cgaaagtggg aatctagaac tcagggccgg
      421 agaaaccttt ttacccgata agtttccgtg ccgacagacc tagattcccg ctttcgcggg
      481 aatgacggga tgtaggttcg tgggaatgat tggtgtcgat cttcttgttg gcggcggcgg
      541 taacggcgtc ggcgtcggct ttggcgcgct gaaccggctg tccgcagaac cattttaccg
      601 aaccggcttg acgcttggcc cacagggaga gttttttgcc ttggatttct ttgtttacgc
      661 cggttgaaag cattgtggcg gtaatgacgc cttttgcgac ttcaactttc tcaacatatt
      721 tgcctttgat ttcagaggag gttgccacgc cggcagaact gttgtcgccg ggccatatgc
      781 cgtgattcag gtaatactct gtgacggctg attttttgga agtgtttgaa gtcggcgcgt
      841 ggtgtttcta tgcaaacggc agatgaagcg tcgcagcagg ttgacggcag gtgcttggtg
      901 ttgatgttgt cggcggtctt gccgttggcg gcggcgacgt cgtcgctgtc ggcggcggtg
      961 cgcgtaaccg gctgtccgca gaaccatttt accgaaccgt cttgacgctt ggcccacagg
     1021 gagagttttt tgccttggat ttctttgttt acgccgcttg atttcatttc ggcggtaacg
     1081 acgccgtttt tgacttcaac gcttttaaca tatttgcctt tgatgtcggt ggcggaggat
     1141 gccacgccgg cagaagtatt gttttttggc catatgccgt gattcaggta atactcggtg
     1201 acggctgatt tttgaccttc agccaaaaga atgacgaatt ttaggtttct tattttggtt
     1261 ttctgtcttt gagggaatga tgaaattttg agttttagga atttatcggg agcaacagaa
     1321 accgctccgc cgtcattccc gcgcaggcgg gaatctaggt ctgtcggtac ggaaacttat
     1381 cgggaaagcg gtttctttag attttgcgtt ctggattccc actttcgtgg gaatgacggg
     1441 atgtaggttc gtgggaatga cggtttaggt atttttatag aaagccgtag gtggtgtttc
     1501 tatgcaaacg gcagatgctg cgtcgcggca ggttgacggc aggtgcttgg tgttgatttt
     1561 gtcggtgtcg ggtgtggcgg cggtgacggc gtcggcggtg gctttggcgt tgcgctcaac
     1621 cggctgtccg cagaaccatt ttaccgaacc gttttgacgc ttggcccaca gggagagttt
     1681 tctgccttgg atttctttgt ttacgccgct tgaagccatt tgggcggtaa cgacgccgtt
     1741 tgcgactgta acgctttgaa catatttgcc tttgatgtcg gaggcggtgg atgccacgcc
     1801 ggcggcatca ttaaatcccg tcattcccac gaaagtggga atctaggact caggactgga
     1861 gaaaccgttt tacccgataa gtttctgcgc cgacaaacct agattcccgc ttttgcggga
     1921 atgacgaagt ttttctgcca tttgccgtga ttcgggcaat actcggtaac ggctgatttt
     1981 ttggaagtgt ttgaagtcgg cgcgtggtgt ttctatgcaa ccggtagatg aatcatcgcg
     2041 gcaggttgac ggcaggtgct tggtgttgat tttgtcgtcg gtgccgttgg cggtggcggc
     2101 tttgacgtcg tcggtggctt tgtcggtgcg cgcaaccggc agtccgcaga accattttac
     2161 cgaaccgtct tgacgcttgg cccacaggga gagttttttg tctttgattt cgttgtttac
     2221 gccgcttgaa gccattatgt cagacggtat tgcccgggca gctttattcg tacactttca
     2281 gcagctcgac ttcaaatatc aaagtggcgt gcgggggaat cacgccgccg gcaccgtgtg
     2341 cgccgtaagc catttcagaa gggatggtca gcttgcgttt gccgctttcc ttcattccgc
     2401 cgaagccttc gtcccagcct ttgatgactt gtccgacgcc gagcgtgatg gtcagcggct
     2461 ggcggcggtc gaggctggag tcgaatttgg taccgtcttc cagccaacct gtgtaatgca
     2521 cggtaatctc tttgccttta actgcttctt ttccgaagcc ttcttgcaag tcttcaataa
     2581 tcaggccgcc catatttgtc ctttcattgc ttgttggtca aaacggcaag ggtaacatac
     2641 cgtccgtcga agtcaaatgc cgctcaaacg tcagctgcat cggtgcagct gaaacggctg
     2701 tgtttgttgg actgttttat ttttttcgta aaggttccat gctttttcat ggaaatagaa
     2761 aacgacggtg ttgattaggg gctcgaccag cgcgaccgcc ccggatatgc ctatactgcc
     2821 cgtcagtaca taggttatac tgaaggcggt gctgaaatgc agtgcggcaa aagtcagggt
     2881 tttaagcatc atcctctccc gaattggaca ttgacggagg gatgataaag attatcataa
     2941 ggctgtgcgg tttaaatttg ctatttgctg ttagtgtaaa taaatcattt tctaaatagg
     3001 gataaaaatt atgaatcaga agaaagtagt cgtattggat gcggatactt tacccggtcg
     3061 gacttttcac ttcgatttcc cacacgagct tgcggtttac ggtacgacag atgctgcgga
     3121 aacggcaggg cgggtgcgcg acgcgcatat tatcatcacc aataaggtga tgatttccgc
     3181 cgacattatt gcggctaatc ctcagcttga gctgattgcc gtcagtgcga ccggtgtgaa
     3241 caatgtcgat attggggcgg cggaggcggc gggcgttgcg gtatgcaatg tccgcgccta
     3301 cggaaacgaa tcggttgcgg aacatgcctt tatgctgatg attgccctga tgcggaattt
     3361 gcctgcctat cagcgtgatg ttgcggcagg attatgggaa aaatcgccgt ttttctgcca
     3421 ttacggcgcg ccgattcagg atttgaacgg caaaacgctg gcggttttcg gacgcggcaa
     3481 tatcggacgg acgctggcag gatacgcgca ggcgttcggg atgggggtgg tgtttgccga
     3541 acacaaacac gcgcccgctg tgcgcgaagg ctatgttgcc tttgaaaatg cggtacggac
     3601 tgccgatgtg ttgtcgctgc actgtccgct gaacgcacaa actgaaaata tgataggcga
     3661 aaatgagttg cggcagatga agcccggtgc ggttttgatt aattgcgggc gcggcgggct
     3721 ggtggatgaa aacgcgctgc ttgccgcact caaatacggg cagatcggcg gggcgggcgt
     3781 ggatgttttg acgaatgagc cgcctaaaaa cggcaatcct ctgttgaagg cacgacttcc
     3841 caatctgatt gttacgccgc ataccgcgtg ggcaagccgc gaggctttgg acaggctgtt
     3901 tgatatattg ttggcgaaca ttcacgcctt tgtgaaaggc gaggcgcaaa accgggtggt
     3961 ttgagcttgt cgggatgacg aaaaaatgcc gtctgaacgc ctcaagggtt cagacggcat
     4021 tgttttgaca tttctgctta accgactttg tcgcccggtt gtgcgcctgc atccacatcc
     4081 aagagcttca gtttgccctc tgccgtggcg gcactcaaaa tcataccttc ggatacgccg
     4141 aattttgcca ttttgcgcgg ggcgaagttg gcgacggcga tgaccattct tccgtttaac
     4201 tcggcagggt tgggataaga cgcggcgata ccggagaaga tgatgcgttt ttcaaaaccg
     4261 aaatcgaggt cgaatttcaa aagtttggtg ctgccctcga cggcttcgca gttcaagact
     4321 ttggcgacgc gcatatcaat tttcataaag tcgtcgaagc tggcctgttc ggcgactttt
     4381 tcgtatttgc tctcttcggc ggcaggtgcg gctgcggcgg cgatgctttg tttgttggct
     4441 tcgattaaat cgtccacttg tttttgctcc actcgttgca ttaaatgttt gtatttgttg
     4501 atggcgtgtt tgcccaaggt tacccttgtg ttcgtccaag taatcgcgtc cagattgagg
     4561 aaacgcgcgg cattggtggc ggtttgcggc aatacggggg cgaggtaggc ggtcagcatc
     4621 gtaaaggcgt tgatgagttc gctgcatact tcgtgcaggc gttcgtcttg gccttcttgt
     4681 ttggcgagtt cccaaggttt gttggcatca acgtattcat taacaatgtc tgccaatgcc
     4741 atgatgtcgc gcagggcgcg ggcgtattcg cggttttcgt agcattcggc aatggcttcg
     4801 ctttgcgcag tcagttttgc cagcaatgcg ctgtcggaaa cgtctttgag ttttccttca
     4861 aagcgtttgg cgatgaaacc tgacgcgcgg gcggcgatgt tgacgtattt gccgacgagg
     4921 tcgctgttga cgcgcgagat aaagtcttgc aggttcaaat cgatgtcttc gattttgctg
     4981 ttgagtttgg cggcgatgta gtagcgcatc cactcggggt ttaggccttg ttccagatag
     5041 gatttggcgg taataaacgt gccgcgcgat ttggacattt tttgtccgtc cacggtcaaa
     5101 aagccgtgtg cgtacacgcc ggtcggggcg cggtggccgg agaaatgcag catggcgggc
     5161 cagaacaggg cgtggaaata gaggatgtct ttgccgatga agtggtacat ctcggtttgg
     5221 ctgccggctt tgaagtattc gtcgaaatcg atgccgatgc ggtcgcacag gtttttaaac
     5281 gatgccatgt agccgacggg cgcgtccagc cagacgtaga agtatttgcc cggcgcgtcg
     5341 gggatttcaa aaccgaaata cggcgcgtcg cgggaaatgt cccagtcgga cagggtggtt
     5401 tcttcgcctt cgcccagcca ttctttcatt ttgttgaggg cttctggttg cagatggggt
     5461 ttgccgtcgt gcgggttgtt gccggaagtc catgctttga ggaagtcggc gcattcgccc
     5521 agtttgaaga agaagtgttc ggattcgcgc aattcgggtt tcgcgccgga aacggcggaa
     5581 tacgggttaa tcagttcggt cggggaatag gtcgtgccgc agacttcgca gttgtcgccg
     5641 tattggtctt gggcgtggca tttcgggcat tcgcctttaa cgaagcggtc gggcaggaac
     5701 atttgttttt cggggtcgaa aagctgctcg atgacgcggc tctcaatctt gccgttggct
     5761 ttcagcgcgc ggtaaatatc ttgggaaaac tgtttgtttt caggggaatg ggtgctgtaa
     5821 taattgtcgt agccgatgtt gaaaccggta aagtcggcga ggtgttcttc gcgcactttg
     5881 gcaatcatgt cttcgggcgc gatgccttgt ttttgcgcgg caagcatcac gggcgtgccg
     5941 tgggtgtcgt cggcgcagca gtagtagcat tcgttgccgc gcagtttttg gaagcgcacc
     6001 caaacgtcgg tttggatgtg ttcgaccatg tggccgaggt ggatgctgcc gttggcatag
     6061 ggcagggcgg aggtaactaa gattttgcgt gtcatattgt gctttgcaaa caatgggtaa
     6121 aggcggatta taccgcaaat caaacgggga aatgccgtct gaagcctgaa aaatcgggct
     6181 tcagacggca tttttgcaaa acggcgggag ttattcgacg gttacggatt tcgccaggtt
     6241 gcgcggcttg tccacatcgg taccgcgtgc gagggcggtg tggtaggcga ggagctgcac
     6301 ggggatagta tgcacgacgg gggacagttt gccgacgtgg cgcggtgcgc ggataacgtg
     6361 cacacctttg gtggcattaa aattactgtc gaggtcggca aagacgaaaa gttcgccgcc
     6421 gcgcgcgccg acttcctgca tattggcttt gactttgtcc aacaggctgt cgttgggtgc
     6481 gatgacgacg acgggcatgt tttcgtccac caaggcaagc ggcccgtgct tcagttcgcc
     6541 ggcaggatag gcttcggcgt ggatgtaggt gatttccttc agttttaacg cgccttcgag
     6601 ggcaatcggg taatggatgc cgcgccccaa aaacagcgcg ctggttttct tggcaaactg
     6661 ttgcgcccag gcggcaattt gcggttcgag gtttaaagcg tgctgcacgc tgccgggaag
     6721 ctggcggagt tcttcggtgt aacgtgcttc gtcttcttcg gaaaccaaac cgcgcacttt
     6781 cgccagcgtt accgccaaac cgaacagcgc aaccagctgc gtggtaaatg ctttggttga
     6841 ggcgacgccg atttccgcac cggcacgggt ataaagcacg aggctgcttt cgcgcggcag
     6901 ggcggattcc atcacgttgc agatggagag gctgtggcgg tgtcccaagg attttgcgta
     6961 tttcaacgcc tccatcgtgt ccagcgtttc gccggattgg gaaatggtaa tgaccagttg
     7021 gtccggatcg gcaatcacgc tgcggtatcg gtattcgctg gcgatttcga catcggccgg
     7081 gattttggcg atggattcca accaatattt ggcggtcagc gcggcgtaat aggacgtgcc
     7141 gcaggcaagg attttgacgc tgcggatgct ttcaaacacg cttttggcgt ttttgccgaa
     7201 gttttcgggg atgaagccgc cgtcgaggaa aacctccgcc gtgtctgcaa tcgcgcgcgg
     7261 ctgctcatgg atttcctttt gcataaagtg gctgtacggt cccagttcca aagaggcgag
     7321 cgagagttcg gataccttga ctttgcgttc ggcaggcagg ccgcttttat cggtcagccg
     7381 tttgatgccg tctgaagcca gcagcgcgat gtcgccgtct tcgaggtacg ccacgcggcg
     7441 cgtaaaggcg atgacggcgg atacgtccga agcgataaag gtttcatcgt cgcccaaagc
     7501 gaccaaaagc gggcagccca tacgcgccac aactaattca tcaggcttgt cttgggcaat
     7561 aaccgcgatg gcgtatgcgc cgtggaaacg tttgaccgct tcctgtaccg cttcaaacag
     7621 cctgccgccg ttttgcgcgt attcgtgatt gatgctgtgt gcgatgactt cggtatccgt
     7681 ttgcgattca aaccggtatc ccaaaccttc caagcgtttg cgttcgcttt caaagttttc
     7741 gatgatgccg ttgtggacga cggctatcat cccaccggaa atatgcggat gggcattcgg
     7801 ctcggtaacg ccgccgtgtg tcgcccaacg cgtatgtccg atgccgatgc tgcccgctat
     7861 tcctttttca cgggcagcgt cctccataag ctgcacgcgt ccgacgcggc gcacgcgttt
     7921 gattttgccg tcggtgttga cggcaatacc tgatgagtca taaccccggt attcgaggcg
     7981 tttgaggccg tcggtcagaa aatcgacgac gttgtgatgg gcgcggatgg cgccgacgat
     8041 accgcacata actgttcctt agtatcaggt tgaaaaaaaa caggtgcgga cggctcccgt
     8101 gccgcacctt ccgcttcgga ttataaaccg cctcccgcgc cgaaaaacag caaaatgccg
     8161 tctgaaggct tgggcttgct caaaaaaggg agggatttcc ctgtttatcc gagatgggcg
     8221 ttcagacggc attgcctgcc gccggtttat agtttttaca aatcaatatt gacaagctga
     8281 aaaaaaaaaa caatatactc gctcggtctt aatgttaaag gagtatggaa atgaaacaaa
     8341 tgcttttagc cgtcggcgtg gcggcggtgt tggcgggctg cggcaaggat gccggcggtt
     8401 acgagggtta ttggcgcgaa aaatcggaca aaaaagaggg tatgattgcc gtcaaaaaag
     8461 aaaaaggcaa ttacttcctt aataaaatca acgtggttac aggtaaggaa gaatctatgc
     8521 ttttgtctga aaaagacggc gagctttcga taaacacggg gataggggaa atcccgatca
     8581 aactttccga cgacgggaaa gagctgtatg tcgaacgcag gcagtatgtc aaaaccgatg
     8641 cggcgatgaa ggacaaaatc atcgcccatc agaaaaagtg cggacaaaca gcacaggcat
     8701 accgcgacgc gcgaaatgcg ttgccgtcaa accagacgta tcagcagcat ctggcggcga
     8761 tcgagcaatt gaaacggcgg tttgaagccg agtttgacga attggaaaaa gaaatcaaat
     8821 gcaacggcag aagcccggca ttgttgcttt agtaggggac aaccgggagg atgccgccgt
     8881 ccgaatcgga tgtgcggttt ctgtaccggt acgggcgggc aggaatgtcc gccttttttg
     8941 ttcggatgcg tttgaatacc cgtttgattc cgaccgtttg caaggggtat ttccgttcgg
     9001 gcg
//
LOCUS       DBBZXU010000079         8932 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.079, whole genome shotgun sequence.
ACCESSION   DBBZXU010000079 DBBZXU010000000
VERSION     DBBZXU010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8932)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8932)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8932
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.079"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..219
                     /locus_tag="ACJJDE_001561"
     CDS             <1..219
                     /locus_tag="ACJJDE_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7541462.1"
                     /translation="IYYRINHSKEFADRQNHINGIENFWNQAKRVLRKYNGIDRKSFP
                     LFLKECEFRFNFGTPSQQLKILRDWCGI"
     gene            432..1967
                     /locus_tag="ACJJDE_001562"
     CDS             432..1967
                     /locus_tag="ACJJDE_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7541463.1"
                     /translation="MSDSKTKERATFGTRRAFMIAAIGSAVGLGNIWRFPYIAFENGG
                     GAFILPYLVALLTAGIPLLLLDYAIGHRYRGSAPLAFRRLGRWFEPVGWWNVMTNIVI
                     CIYYAVIIGWAASYTYYSVNAAWGADPQGFFFKDFLQMAGPEALGLDFVGKVAGPLAG
                     VWVFTAAIMALGVQKGVARASSFFMPLLLVMFLIMVGISLTLPGAAKGLDALFTPDWS
                     KLADSKVWVAAYGQIFFSLSICFGIMVTYSSYLKKKTDLGGTGLVVGFANSSFELLAG
                     IGVFAALGFMAQAGGKAVNEVASGGIGLAFIAFPTIINQAPMGWLIGILFFGSLVFAG
                     VTSMISILEVIVAAIQDKLNIGRVNATLLVCIPMGIVSTLLFGTATGLPVLDVMDKFV
                     NTYGIVAAGFVYVAAIIISGRLPELRKHLNALSSIRIGGLWTVCVVVTVVMLGYMLFK
                     DTSGLMEKNYEGYPDGFLSIFGWGMSAALVVFGLLLSLLPWKHGQDFNVKDEHEHEQG
                     EEK"
     gene            1964..2056
                     /locus_tag="ACJJDE_001563"
     CDS             1964..2056
                     /locus_tag="ACJJDE_001563"
                     /inference="COORDINATES: protein motif:HMM:NF033493.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine/alanine import family NSS transporter
                     small subunit"
                     /protein_id="HGG7541464.1"
                     /translation="MSTSAIVMMIVSIVIIWGGLLLSLLRLPNE"
     gene            complement(2092..3336)
                     /gene="lysA"
                     /locus_tag="ACJJDE_001564"
     CDS             complement(2092..3336)
                     /gene="lysA"
                     /locus_tag="ACJJDE_001564"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HGG7541465.1"
                     /translation="MTLFCEQVPYPRLAEAFGTPLYVYSQSALTEAFEHYQTAFAELS
                     PLVCYAVKANGNLSIIKHFASLGSGFDIVSGGELARVLAAGGDATKTIFSGVGKNEAE
                     IEFALNAGVKCFNMESIPEIDRIQKVAARLGKTASVSLRVNPDVDAKTHPYISTGLKA
                     NKFGIAYADALEAYRHAAQQPNLKIIGIDCHIGSQLTDLSPLVEACERILILVDALAA
                     EGIVLEHLDLGGGVGIVYQDENVPDLGAYAQAVQKLIGTRRLKLILEPGRSLVGNAGS
                     LLTRVEFVKYGEEKNFVMVDAAMNDLMRPALYDAYHHIEAVETKDIEPLTANIVGPIC
                     ETGDFLGKDRTIACEEGDLLLIRSAGAYGASMASNYNARNRAAEVLVDGNEYRLIRRR
                     ETLEQQMANELACLQAEHQNAV"
     gene            complement(3347..3517)
                     /locus_tag="ACJJDE_001565"
     CDS             complement(3347..3517)
                     /locus_tag="ACJJDE_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HGG7541466.1"
                     /translation="MKYGVFFAAATALLLSACGYKGDLYLPKEGDTARFGAIQTGLQL
                     QNKPQSAPQTRK"
     gene            3588..3911
                     /gene="cyaY"
                     /locus_tag="ACJJDE_001566"
     CDS             3588..3911
                     /gene="cyaY"
                     /locus_tag="ACJJDE_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HGG7541467.1"
                     /translation="MMTESEFIRASEALFEHIEDQIDENGWDFDCRFAGNVLTIEAEN
                     GTQIIVNRHTPNQELWIAAKSGGYHFAEQNGKWLATRDGRDFYDVLNEALSAASGEAV
                     EIEEL"
     gene            3938..4954
                     /locus_tag="ACJJDE_001567"
     CDS             3938..4954
                     /locus_tag="ACJJDE_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HGG7541468.1"
                     /translation="MNTRPFYFGLIFIAIIAILANYLGNTDFSHHYHISALIIAILLG
                     MAIGNTIYPQFSTQVEKGVLFAKGALLRTGIVLYGFRLTFGDIADVGLNAVVTDAIML
                     ISTFFFTALLGIRYLKMDKQLVYLTGAGCSICGAAAVMAAESVTKAESHKVSVAIAIV
                     VIFGTLAIFTYPLFYTWSQDLINAHQFGIYVGSSVHEVAQVYAIGENINPIVANTAVI
                     SKMIRVMMLAPFLLMLSWLLTRSDGVSENTSHKITIPWFAVLFIGVAIFNSFDLLPKE
                     LVKLFVEIDSFLLISSMAALGLTTQASAIKKAGLKPFVLGILTYLWLVVGGFLVNYGI
                     SKLI"
     gene            4980..5399
                     /locus_tag="ACJJDE_001568"
     CDS             4980..5399
                     /locus_tag="ACJJDE_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2251 domain-containing protein"
                     /protein_id="HGG7541469.1"
                     /translation="MAQLPLYRTAEIENFTVGTPEVLESFSKHIPYGVVFEDDGDTGY
                     FYAASQDGILDALHIYNVEDVSDKHIPNHVLILWDDACTIAALCINDYIHAVYDFVEQ
                     AGYCRNGFPEAQGEWPKVTDRVLDDELQDKILSRKPT"
     gene            5421..5927
                     /gene="luxS"
                     /locus_tag="ACJJDE_001569"
     CDS             5421..5927
                     /gene="luxS"
                     /locus_tag="ACJJDE_001569"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HGG7541470.1"
                     /translation="MPLLDSFKVDHTRMHAPAVRVAKTMTTPKGDTITVFDLRFCVPN
                     KEILPEKGIHTLEHLFAGFMRDHLNGNGVEIIDISPMGCRTGFYMSLIGTPSEQQVAD
                     AWLASMQDVGNVKDQSKIPELNEYQCGTYQMHSLAEAQQIAQNVLAHKVAVNKNEELT
                     LDEGLLNA"
     gene            6072..8861
                     /gene="polA"
                     /locus_tag="ACJJDE_001570"
     CDS             6072..8861
                     /gene="polA"
                     /locus_tag="ACJJDE_001570"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004518994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HGG7541471.1"
                     /translation="MSNRPTLLLVDGSSYLYRAYHAMAQLTAPDGAPTGAMYGVLNML
                     RRLRADYVHDYCAVVFDAKGKNFRHEMFPDYKATRPPMPDDLRPQAEALPDLVRLIGW
                     PVLVIPQVEADDVIGTLAAMAGEAGWNVVVSTGDKDMAQLVNERVTLVNTMSGETLDI
                     EGVKAKFGVRPDQIRDYLALMGDKVDNVPGVEKCGPKTAVKWLEAYGSLAGVMEHAAE
                     IKGKVGENLRAALQRLPLSYDLVTIKTDVDLHTELSDGIESLRRTAPKWAQLVVDFKR
                     WGFRTWLKEAESRMHEAADGDLFGSDSIGEQAALNAEVPSEKQPELAPTPEKLDYQAV
                     TTEAQLAALLDKLSQADTIGIDTETTSLDAMNASLVGISIAFQAGEAIYIPVGHSLTA
                     APEQIDLQDVLGRLKPHLENPALKKIGQNLKYDQHVFANYGIALNGIAGDAMLASYII
                     ESHLGHGLDELSERWLGLETITYESLCGKGAKQISFADVAIGQATEYAAQDADFALRL
                     EAHLRAQMDAKQLEMYEKMELPVAQVLFEMERNGVQIDRAELSRQSAELGAELMKLEQ
                     EAYAVAGQPFNLNSPKQLQEILFDKMGIPTKGLKKTAKGGISTNEAVLEQLAPDYPLP
                     KIILQNRSLAKLKSTYTDKLPEMISPKDGRVHTTYAQAVAITGRLASNNPNLQNIPIR
                     TAEGRRVRRAFTAPQGSVIVSADYSQIELRIMAHLSGDKTLITAFQNGEDVHRRTAAE
                     VFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNISAKTFIDRYFARYPGV
                     AEYMQRTKEQAAAQGFVETLFGRRLYLPDIRNKNANARAGAERAAINAPMQGTASDLI
                     KRAMIDVRNCLSDGIGSKLVMQVHDELVLEVVETELDFVKEKLPQIMAKVDGGLLDVP
                     LVAEVGVGENWEEAH"
BASE COUNT         2103 a         2331 c         2342 g         2156 t
ORIGIN      
        1 atttattacc gcatcaacca ttccaaggaa tttgcagacc gtcagaacca cattaacggc
       61 attgagaatt tttggaatca ggcaaaacgt gtcttgcgaa aatacaatgg aatcgatcgc
      121 aaatctttcc cgctgttctt gaaagaatgc gaatttcgat ttaacttcgg cacaccgtct
      181 caacagctta aaatcctgcg ggattggtgt gggatttagg gctaatctag tacagcccct
      241 aaaatttttc gttttcaagc cttcaccgct tgccatcagc gttaaatttt tttacgataa
      301 gcacatagat tgtaaacaat cggccacaag ccggtttgtt ttttcagaag acattatccc
      361 tgtcagacgc tatttctata tatttcgcct ataatggctt gtttttaata aataattcaa
      421 gaggtatcaa cgtgtctgat tccaagacga aagaacgcgc cacattcggc acgcgccgcg
      481 cgtttatgat tgccgccatc gggtccgccg tcggcttggg caatatttgg cgtttcccct
      541 atattgcttt tgaaaacggc ggcggcgcgt tcatcctgcc ctatctggtc gcgcttctga
      601 cggcgggcat cccgctgctg ctgctcgatt atgccatcgg ccaccgttac cgtggttctg
      661 cgcccttggc tttccgccgc ctcggacgat ggtttgagcc ggtcggctgg tggaacgtga
      721 tgaccaatat cgtcatctgc atctattacg cggtaattat cggttgggcg gcaagctata
      781 cctattattc ggtcaacgcc gcctggggtg cggatccgca gggttttttc tttaaggact
      841 tcctgcaaat ggcgggcccg gaagccttgg gtttggattt tgtcggcaaa gtcgccggtc
      901 ctttggcggg cgtgtgggtt tttaccgccg ccattatggc gttgggcgtg caaaagggcg
      961 tggcgcgcgc ctcgtcgttc tttatgccgc tgcttttggt gatgtttttg attatggtcg
     1021 gcatttcact aaccctgccg ggtgcggcaa agggcttgga cgcattgttt acgcccgact
     1081 ggtcgaaact cgccgattcc aaggtctggg tggcggcata cgggcagatt ttcttttcgc
     1141 tttccatctg cttcggcatt atggttacct attcttctta tttgaagaaa aaaaccgact
     1201 tgggcggaac ggggctggtg gtcggttttg ccaacagcag ctttgaactg ctcgcgggca
     1261 tcggcgtgtt tgccgcattg ggctttatgg cgcaggcggg cggtaaggcg gtcaacgagg
     1321 ttgcctcagg cggcatcggt ttggcgttta tcgcctttcc gaccattatc aaccaggcac
     1381 cgatgggctg gctgatcggc atattgtttt tcggttcgct ggtattcgcc ggcgttacgt
     1441 cgatgatttc catccttgaa gtgattgtgg cggcgattca ggacaagctg aacatcgggc
     1501 gcgtcaacgc cacgctgctg gtctgcattc cgatgggcat tgtttccacg ctgctgttcg
     1561 gtacggcgac ggggctgccg gttttggacg tgatggacaa attcgtcaac acctacggca
     1621 ttgttgccgc cggctttgtt tatgttgccg ccatcatcat cagcggcagg ctgccggaat
     1681 tacgcaagca cctgaacgct ttgtcctcca tccgcatcgg cggcttgtgg acggtctgcg
     1741 tcgtggttac cgtcgtgatg ctcggctata tgctgtttaa agataccagc ggcctgatgg
     1801 agaaaaatta cgaaggttat ccggatggtt tcctcagtat tttcggctgg gggatgtcgg
     1861 cggcgttggt cgtgttcggg ctgctgctgt cgttgctgcc ttggaaacac ggtcaggatt
     1921 tcaacgtcaa agacgaacac gaacatgaac aaggagaaga aaaatgagta cttccgccat
     1981 tgtgatgatg attgtctcaa tcgtgataat ctggggaggg ctgctgcttt ccctgttaag
     2041 gctgccgaac gagtaagcct ttagagcgtt aaaaatgccg tctgaaccgc ttcagacggc
     2101 attttgatgt tcggcttgca ggcaggcgag ttcgtttgcc atttgctgtt ccaaggtttc
     2161 gcgccggcgg atgagtcggt attcgttgcc gtccaccaac acctctgccg cacggttgcg
     2221 cgcgttgtaa ttgctcgcca tactggctcc gtatgcgccc gcgctgcgga taagcagcaa
     2281 atcgccttct tcgcaggcga tggtgcggtc tttgccgagg aagtcgccgg tttcgcaaat
     2341 cggaccgacg atgttggcgg tcagaggctc aatgtctttg gtttcgaccg cctcgatgtg
     2401 atgataggca tcataaagcg ccgggcgcat caaatcgttc atcgccgcat cgaccatcac
     2461 aaagtttttc tcttcgccgt atttgacgaa ttcgacgcgt gtcagcagcg aacctgcgtt
     2521 gccgaccaag ctgcggccgg gctcaagaat gagtttcaga cggcgtgtgc cgatcagttt
     2581 ttgaacggct tgggcatacg cgcccaaatc aggcacattt tcgtcttggt aaacaatgcc
     2641 gacgccgccg cccaagtcca agtgttccaa cacaatgcct tcggcggcaa gcgcgtcaac
     2701 caaaatcaaa atgcgctcgc aggcttcgac cagcgggctt aagtcggtca gttgcgaacc
     2761 gatgtggcag tcgatgccga tgattttcaa attgggctgt tgtgcggcat ggcggtaggc
     2821 ttcgagcgcg tcggcgtagg caatgccgaa tttgttggct ttcagacctg tggagatgta
     2881 gggatgggtt ttcgcatcga catcgggatt gacgcgtagg gagacggacg cggttttgcc
     2941 caaacgcgcg gcaacctttt gaatacggtc gatttcggga atgctttcca tattgaagca
     3001 tttcacgcct gcattcagcg cgaactcgat ttccgcctcg tttttgccca cgccggaaaa
     3061 aatcgttttc gtcgcgtcgc cgcctgccgc caaaacgcgt gccaattcgc cgccggacac
     3121 aatgtcaaaa ccgctcccca aagaagcaaa gtgtttgatg atgctcaggt tgccattggc
     3181 tttaaccgca tagcagacga gcggggagag ctcggcaaag gcagtttggt agtgttcaaa
     3241 tgcttcggtc agcgcggatt ggctgtacac ataaagcggt gtgccgaatg cttcggcaag
     3301 gcgggggtag gggacttgtt cgcaaaacag ggtcatatct tcgttttcat tttcgggttt
     3361 gtggggcgga ttgcggtttg ttttgaagct gcaaaccggt ttggattgcg ccgaaacgcg
     3421 ccgtatcgcc ttctttgggc aggtagaggt cgcctttgta accgcaggcg gaaagcagga
     3481 gggcggttgc cgccgcaaaa aatacgccgt atttcatcgg taaacttcct tcataagcgc
     3541 gaatgtggca agattcggta tcttaaacaa aaaccacaca aaaagccatg atgaccgaaa
     3601 gcgagtttat ccgcgcgagc gaagcattat ttgaacacat cgaagaccaa atcgacgaaa
     3661 acggctggga tttcgactgc cggtttgccg gaaacgtcct gaccatcgaa gccgaaaacg
     3721 gcacgcaaat catcgtcaac cgccacacgc ccaaccaaga attatggatt gccgccaaaa
     3781 gcggtggcta ccatttcgcc gaacaaaacg gcaaatggct ggcaacgcgc gacggacggg
     3841 atttttacga cgttttaaac gaagccctga gcgcggcttc gggcgaagcg gtagagattg
     3901 aggaattgtg atttgggtgt tatcacggaa agaaaaaatg aacacacgtc ccttttattt
     3961 cggacttata tttatcgcga ttattgctat acttgctaac tatttaggaa acactgattt
     4021 ttcccatcat tatcatatca gtgctttaat tattgctatc ttgctgggaa tggcaatcgg
     4081 caataccatt tatccgcaat tttcaacaca agtggaaaaa ggtgttttgt ttgccaaagg
     4141 cgcgcttctt cgcactggca ttgtgttgta tggttttcgc ctcacttttg gcgatattgc
     4201 cgatgtagga ttaaatgcgg ttgtcactga tgcaatcatg ctaatttcaa ccttcttttt
     4261 taccgcactt ttaggcattc gttatctaaa aatggataaa caattggttt atctcactgg
     4321 ggcaggttgc agcatttgcg gtgcggcagc ggttatggcg gcagagtctg ttaccaaagc
     4381 agaatcccat aaagtttcag tggcgattgc catagtggtc attttcggga cgcttgctat
     4441 ttttacttac cccttgttct acacgtggtc acaagattta attaacgccc atcaattcgg
     4501 tatttatgtt ggttctagtg tacacgaagt ggctcaagtg tatgcgattg gggaaaatat
     4561 taatcctatc gtggcgaata ctgccgtcat ttccaaaatg atccgagtga tgatgctcgc
     4621 ccccttttta ttaatgcttt cttggttatt aacacgtagt gatggggtat cagaaaatac
     4681 ctcacacaaa attacaattc cttggtttgc tgtacttttt attggtgttg ccatttttaa
     4741 ttcttttgat ttattaccaa aagaactcgt gaaattattc gttgaaatcg attctttctt
     4801 attaatttca tcaatggctg cgcttggctt aacgacgcaa gcaagcgcaa tcaaaaaggc
     4861 aggattaaaa ccgtttgttt taggaatact aacttattta tggctagtgg ttggtggatt
     4921 tttagtgaac tatggaatat caaaattaat ataaaattca ctaaagagag cgttacccaa
     4981 tggcacaatt acccctgtat cggactgccg aaatcgaaaa ttttactgtc ggcacgcccg
     5041 aagttttaga atcattttcc aaacatatcc cttatggtgt tgtctttgaa gacgacggcg
     5101 acacaggcta cttctatgcc gcttcgcaag acgggatttt agatgccttg cacatttaca
     5161 atgtcgaaga tgtatccgat aaacatatcc ccaatcatgt cttgatttta tgggatgatg
     5221 cctgcaccat agccgcattg tgtatcaacg actacattca tgccgtctat gattttgtcg
     5281 aacaggcagg atattgccgc aacggcttcc ctgaagcaca aggcgaatgg ccgaaagtca
     5341 cagaccgcgt attggacgat gaattgcagg acaaaatcct atcccgaaaa cctacataac
     5401 ctactcaaaa ggataaccca atgcccctac tagacagttt caaagtcgat cacacccgta
     5461 tgcacgcccc cgccgtacgc gtggcgaaaa ccatgaccac gcccaaaggc gacaccatta
     5521 ccgtattcga cctgcgtttc tgcgtgccca acaaagaaat cctgcccgaa aaaggcatcc
     5581 acacgctgga gcatttgttc gccggtttta tgcgcgacca cttgaacggc aacggcgtgg
     5641 aaattatcga catttccccg atgggctgcc gcaccggttt ctacatgagc cttatcggca
     5701 cgccttccga acagcaggtc gccgatgcat ggctcgcctc gatgcaggat gtgggcaatg
     5761 tcaaagacca aagcaaaatc cccgagttga acgaatacca atgcggcact tatcaaatgc
     5821 actcgctcgc cgaagcgcag caaatcgcgc aaaacgtgtt ggcgcacaaa gtggcggtga
     5881 acaaaaacga agagctgacg ctggatgaag ggctgctgaa cgcctaatcc gccaaaaatg
     5941 ccgtctgaac aagggtttca gacggcattt gccttttccg ttataatccg gggttgtgcg
     6001 gggtcgggtt ttaagccggc atcgtccttc cctatttttt ctgtccctta tcggttttaa
     6061 gcgggttttt tatgtccaac agacctacac tcctcctcgt tgacggctcg tcctacctct
     6121 accgcgcgta tcacgcgatg gcgcagttga ccgcgcccga tggtgcgccg acgggcgcga
     6181 tgtatggcgt gttgaacatg ctgcgccggt tgcgggcgga ttatgtgcat gattattgcg
     6241 cggtggtgtt tgatgcgaag ggcaagaatt tccgccacga gatgttcccc gactacaagg
     6301 cgacgcgccc gccaatgccg gacgatttgc gtcctcaagc ggaagccttg ccggatttgg
     6361 tgcggttgat aggctggccg gtgctggtga ttccgcaagt cgaagcggat gacgtgattg
     6421 gcacgctggc ggcaatggca ggcgaagcag gttggaatgt ggtggtgtcc accggcgata
     6481 aggacatggc gcagttggtg aacgaacgcg taacgctggt gaacacgatg agcggcgaaa
     6541 cgctggacat tgaaggtgtg aaggcgaaat tcggcgtgcg ccccgaccaa atccgcgatt
     6601 atctcgcgct gatgggcgac aaggtggaca acgtgccggg cgtggaaaag tgcggcccga
     6661 aaacggcagt gaaatggctg gaagcctacg gctcgctggc gggcgtgatg gaacacgcgg
     6721 cggaaatcaa gggcaaagtg ggcgagaatc tgcgtgccgc cctgcagcgc ctgccgctgt
     6781 cgtatgattt ggtgacgatt aaaaccgatg tggacttgca caccgaactt tcagacggca
     6841 tcgaaagcct gcgccgtacc gcgccgaaat gggcgcaact ggttgtcgat ttcaaacgct
     6901 ggggcttccg cacctggctg aaagaagcgg aaagtcgtat gcacgaagcg gcggacggtg
     6961 atttgttcgg cagcgacagc atcggcgagc aggcggcttt gaatgcggag gtgccgtctg
     7021 aaaaacaacc cgaacttgcc ccgacccccg aaaaactgga ttatcaagcc gttaccaccg
     7081 aagcgcagct tgccgccttg ttggacaaac tgtcgcaggc ggacacaatc ggcatcgata
     7141 cggaaaccac gtcattagac gcgatgaacg cctcgttagt cggcatcagc atcgcgttcc
     7201 aagcaggcga agcgatttac atccccgtag ggcacagcct gaccgctgca cccgaacaga
     7261 ttgatttgca agacgtatta ggccgtctga aaccgcattt ggaaaacccc gccctgaaaa
     7321 aaatcgggca aaacctcaaa tacgaccaac acgttttcgc caactacggc attgccttaa
     7381 acggcattgc cggcgacgcg atgcttgctt cctacatcat cgaaagccac ctcggacacg
     7441 gcttggacga attgtccgaa cgctggctgg gcttggaaac cattacctac gaatcgctgt
     7501 gcggcaaagg cgcgaagcaa atcagttttg ccgatgtcgc catcggacag gcgaccgaat
     7561 acgccgccca agacgccgat ttcgccctgc gcctcgaagc gcatctgcgt gcgcaaatgg
     7621 acgccaaaca gcttgaaatg tatgaaaaaa tggagctgcc cgtcgcgcag gtattgtttg
     7681 aaatggaacg caacggcgtg caaattgatc gcgccgaact ctcccgccaa agcgcggaac
     7741 tcggcgcaga gctgatgaag ctcgaacaag aagcctatgc cgtcgcaggc cagccgttta
     7801 acctcaactc gcccaaacag ctccaagaaa tcctgttcga caaaatgggc attcccacca
     7861 aaggcctgaa aaaaaccgcc aaaggcggca tttccaccaa cgaagccgtg ctcgaacagc
     7921 tcgcacccga ctaccccctg cccaaaatca tcctgcaaaa ccgcagcctg gcgaagctca
     7981 aatccaccta caccgacaaa ctgcccgaaa tgatttcccc caaagacggc cgcgtgcata
     8041 ccacctacgc ccaagccgtc gccattaccg gccgtctcgc cagcaacaac cccaacctgc
     8101 aaaacatccc catccgcacc gccgaaggcc gccgcgtgcg ccgcgccttt accgcaccgc
     8161 aaggcagcgt catcgtttcc gccgactatt cccaaatcga gctgcgcatc atggcgcacc
     8221 tctccggcga caaaaccctg attaccgcgt tccaaaacgg cgaagacgta caccgccgca
     8281 ccgccgccga agtgttcggc attgcccccg aaaacgtctc gtccgaacaa cgccgctacg
     8341 ccaaaaccat caacttcggt ctcatttacg gcatgggcca atacggcctc gccaaatcat
     8401 tgggtatcga caacatctcc gccaaaacct tcatcgaccg ctacttcgcc cgctatcccg
     8461 gcgtcgccga atacatgcag cgcaccaaag aacaagcagc agcgcaaggc ttcgtcgaaa
     8521 ctctgttcgg ccgccgcctc tacctgcccg acatccgcaa caaaaacgcc aacgcccgcg
     8581 ccggagccga acgcgccgcc atcaacgccc ccatgcaagg caccgcctcc gacctcatca
     8641 aacgcgccat gatagacgtg cgaaactgtc tttcagacgg catcggcagc aaactggtca
     8701 tgcaggtgca tgacgaactg gtgctggaag tcgttgaaac cgaactggat tttgtcaaag
     8761 aaaaactgcc gcagattatg gcgaaagtgg acggcggatt attggatgta ccgctggtgg
     8821 ctgaggttgg cgtaggggag aattgggaag aggcacattg attgaaaggt gttatatgct
     8881 atctttattt aaataaaatt taatttttgg tatatttttt ctaaatgttc ct
//
LOCUS       DBBZXU010000080         8904 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.080, whole genome shotgun sequence.
ACCESSION   DBBZXU010000080 DBBZXU010000000
VERSION     DBBZXU010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8904
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.080"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..132)
                     /locus_tag="ACJJDE_001571"
     CDS             complement(<1..132)
                     /locus_tag="ACJJDE_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005694496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HGG7541472.1"
                     /translation="MNILLLDGGKAFGHSHGGLNRTLHKKAKEVLTALGHNVQETVID
                     "
     gene            371..1270
                     /gene="crgA"
                     /locus_tag="ACJJDE_001572"
     CDS             371..1270
                     /gene="crgA"
                     /locus_tag="ACJJDE_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_151940473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator CrgA"
                     /protein_id="HGG7541473.1"
                     /translation="MKTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEK
                     LGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMP
                     MVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAGELDDSGLRARHLF
                     DSRFRVIASPEYLAKHGTPQSAEELAGHQCLGFTEPGSLNTWAVLDAQGNPYKISPHF
                     TASSGEILRSLCLSGCGIACLSDFLVDNDIAEGKLIPLLAEQTSNKTHPFNAVYYSDK
                     AVNLRLRVFLDFLVEELGNNLCG"
     gene            complement(1497..4712)
                     /gene="carB"
                     /locus_tag="ACJJDE_001573"
     CDS             complement(1497..4712)
                     /gene="carB"
                     /locus_tag="ACJJDE_001573"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HGG7541474.1"
                     /translation="MPKRTDLKSILIIGAGPIVIGQACEFDYSGAQACKALREEGYKV
                     ILVNSNPATIMTDPEMADVTYIEPIMWQTVEKIIAKERPDAILPTMGGQTALNCALDL
                     ARNGVLAKYNVELIGATEDAIDKAEDRGRFKEAMEKIGLSCPKSFVCHTMNEALAAQE
                     QVGFPTLIRPSFTMGGSGGGIAYNKDEFLAICERGFDASPTHELLIEQSVLGWKEYEM
                     EVVRDKNDNCIIICSIENFDPMGVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIG
                     VDTGGSNVQFAVNPENGEMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGFTLDE
                     LRNDITGGKTPASFEPSIDYVVTKIPRFAFEKFPAADDRLTTQMKSVGEVMAMGRTIQ
                     ESFQKALRGLETGLCGFNPRSSDKAEIRRELANPGPERMLFVADAFRAGFTPEEIHEI
                     CAIDPWFLAQIEDLVKEEKSVSDGILSDLDFAALRRLKRKGFSDKRIAQLLGVKEKEV
                     REHRYALKLHPVYKRVDTCAAEFATETAYLYSTYEEECESRPSDRKKVMILGGGPNRI
                     GQGIEFDYCCVHAALALRESGFETIMVNCNPETVSTDFDTSDRLYFEPLTLEDVLEIV
                     RTENPWGVIVHYGGQTPLKLANALVENGVNIIGTSADSIDAAEDRERFQKVLNDLGLR
                     QPPNRIAHNEEEALVKAEEIGYPLVVRPSYVLGGRAMQIVHSAEALQKYMREAVQVSE
                     DSPVLLDFFLNNAIEVDVDCVSDGKDVVIGGIMQHVEQAGIHSGDSGCSLPPYSLSEE
                     IQDEIRRQTKAMAYALGVVGLMNVQFAVQDGVVFVLEVNPRASRTVPFVSKATGVPLA
                     KVGARCMAGISLKEQGVEKEVVPDFYAVKEAVFPFIKFPGVDTILGPEMRSTGEVMGV
                     GASFGEAYYKAQLGAGERLNPTGKIFLSVREEDKERVIKTAKNFQALGYGICATRGTA
                     QYLTEHGLIVQTINKVPEGRPHIGDALKNGEIALVVNTVSSDPQSVSDSHIIRQSALQ
                     QRVPQYTTTAGGEAMSEGAKSRDHLGVYSVQELHGRLKNRS"
     gene            complement(4741..5382)
                     /locus_tag="ACJJDE_001574"
     CDS             complement(4741..5382)
                     /locus_tag="ACJJDE_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6037 family protein"
                     /protein_id="HGG7541475.1"
                     /translation="MSIPINFNNLKYLLNDMRNKNRIIEAFPFNYNQRQYAVILTRYK
                     PDEPRPDDYAQAKLEFFNLNSENSIFAYADFYEVHFKSATDFINFFKINVQAGAAKIR
                     EIFQSFSNLFADFIPTQTKKDLDIIYKKIVATRLEPNSPNTIYCYDVRRNGKDKAGKP
                     NRRSVENSEKAKILRPELYEKFKADSNYSFFFSDNPSDEKTDAEIIREVTNRQ"
     gene            5544..5942
                     /locus_tag="ACJJDE_001575"
     CDS             5544..5942
                     /locus_tag="ACJJDE_001575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541476.1"
                     /translation="MRYVCTRSPFSLQPQPTACVPCGTLSADEFKGRLKKRSQRLFHL
                     PCDKGCLKHSRCRCFGHSFSDDLQRLNLLQPTPSPVGEGWGEGILRISATFPNTLTAK
                     TQALWLVALSLTLSHGREDWAVVGAKVSVN"
     gene            complement(6050..6439)
                     /locus_tag="ACJJDE_001576"
     CDS             complement(6050..6439)
                     /locus_tag="ACJJDE_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HGG7541477.1"
                     /translation="MNPHEKLLTTDNPILRQRAKAMRQEMSGAEAKLWQHLRAGRLNG
                     YKFRRQQPMGNYIVDFMCVTPKLIVEADGGQHTEQAAYDHARTAYLNSLGFTVLRFWN
                     HEILQQTNDVLTEILLVLQELEKQAAR"
     gene            complement(7013..7138)
                     /locus_tag="ACJJDE_001577"
                     /pseudo
     CDS             complement(7013..7138)
                     /locus_tag="ACJJDE_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687733.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7184..8317)
                     /gene="carA"
                     /locus_tag="ACJJDE_001578"
     CDS             complement(7184..8317)
                     /gene="carA"
                     /locus_tag="ACJJDE_001578"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HGG7541478.1"
                     /translation="MSTPALLVLADGSVFHGTSIGYEGSTSGEVVFNTSMTGYQEILT
                     DPSYCKQIVTLTYPHIGNTGTNAEDEESRSVYAAGLIIRDLPLLHSNFRASESLHDYL
                     VRNQTVAIADIDTRRLTTLLREKGAQGGAILTGADATVEKAQELIAAFGSMVGKDLAK
                     EVSCTETYEWTEGEWALGKGFVTPDEQPYHVVAYDFGVKTNILRMLASRGCRLTVVPA
                     QTSAQDVLALNPDGVFLSNGPGDPEPCTYAIEAVQKLMESGKPIFGICLGHQLISLAI
                     GAKTLKMRFSHHGANHPVQDLDSGKVVITSQNHGFAVDADTLPANARITHKSLFDNTL
                     QGIELTDKPVFCFQGHPEASPGPQDVGYLFDKFIGNMKAAKRA"
BASE COUNT         1983 a         2292 c         2318 g         2311 t
ORIGIN      
        1 atcaatcacg gtttcttgaa cattgtgtcc gagcgcggtc aaaacttctt tcgctttttt
       61 gtgaagcgtg cggtttaacc cgccgtgaga atgtccgaac gctttgccgc cgtctaataa
      121 taaaatattc atttgttacc tcgtttgtga attgatgaat gtattgtgcc gttttacttt
      181 ataatttaaa agtgcaaaaa taagaaaaca cttttgcgtc aaatgaaata atcagatgtt
      241 ccaacacacg ggatggcaca taaagcaccg ccctgtgtgc cgtcctgatt cggaaggggt
      301 tacacccctc ccaaataaag tctgatcctg ccgccctaaa gggcggggtt ccaaccgaaa
      361 aggaaacacg atgaaaacca attcagaaga actgaccgta tttgttcaag tggtggaaag
      421 cggcagcttc agccgtgcgg cggagcagtt ggcgatggca aattctgccg taagccgcat
      481 cgtcaaacgg ctggaggaaa agttgggtgt gaacctgctc aaccgcacca cgcggcaact
      541 cagtctgacg gaagaaggcg cacaatattt ccgccgcgcg cagagaatcc tgcaagaaat
      601 ggcagcggcg gaaaccgaaa tgctggcagt gcacgaaata ccgcaaggcg tgttgcgcgt
      661 ggattccgcg atgccgatgg tgctgcatct gctggcgccg ctggcagcaa aattcaacga
      721 acgctatccg catatccgac tttcgctcgt ttcttccgaa ggctatatca atctgattga
      781 acgcaaagtc gatattgcct tacgggccgg agaattggac gattccgggc tgcgtgcacg
      841 ccatctgttt gacagccgct tccgcgtaat cgccagtcct gaatacctgg caaaacacgg
      901 cacgccgcaa tctgcagaag agcttgccgg tcaccaatgt ttaggcttca ccgaacccgg
      961 ttctctaaat acatgggcgg ttttagatgc gcagggaaat ccctataaga tttcaccgca
     1021 ctttaccgcc agcagcggtg aaatcttacg ctcgttgtgc ctttcaggtt gcggtattgc
     1081 ttgcttatca gattttttgg ttgacaacga catcgctgaa ggaaagttaa ttcccctgct
     1141 cgccgaacaa acctccaata aaacgcaccc ctttaatgct gtttattaca gcgataaagc
     1201 cgtcaacctc cgcttgcgcg tatttttgga ttttttagtg gaggaactgg gaaacaatct
     1261 ctgtggataa ttctataaaa acctgccata aaattgtttt tactcactta ataactttga
     1321 gaaaaaataa ataagatgat gtatagtcgg cggcaatggc agtctatatg gggagcgtga
     1381 tagggctgtt ccttatgtac ggcttgtgtg tggcaacatc ggctttccaa atgacaaaat
     1441 gccgtctgac accgtaaaaa aaggtttcag acggcatttt caacccgatt caggcatcag
     1501 ctgcggtttt tcaaacgccc gtgcagttct tgaacgctgt acacgcccaa gtggtcgcgg
     1561 cttttcgcgc cttcgctcat cgcttcgccg cccgcagtag tggtgtattg cggcacacgt
     1621 tgctgcaatg cgctttggcg gatgatgtgg ctgtcggaca cggattgcgg atcgctggaa
     1681 acggtattca cgaccagtgc gatttcgccg tttttcagcg cgtcgccgat gtgcgggcgg
     1741 ccttcgggga ctttattgat ggtttgtaca atcagcccgt gttcggtcag gtattgcgcc
     1801 gtgccgcgcg tggcgcagat gccgtagcct aaggcttgga agtttttggc ggttttaatg
     1861 acgcgttctt tgtcttcttc gcgcacggag aggaagattt tgccggtcgg gttgaggcgt
     1921 tcgcccgcgc cgagttgggc tttgtagtag gcttcgccaa agcttgcgcc cacgcccatg
     1981 acttcgccgg tggagcgcat ttccggtccc aaaatcgtat ccacgcccgg gaatttgatg
     2041 aatgggaaca cggcttcttt aacggcatag aaatcgggga caacttcttt ttccacgcct
     2101 tgttctttca gggaaatgcc tgccatgcag cgcgcgccga ctttggcgag cggcacgccg
     2161 gtggctttgg agacgaaggg cacggtgcgg ctggcgcgcg ggttcacttc caatacgaac
     2221 accacgccgt cttgtacggc aaactgcacg ttcatcagtc cgaccacgcc cagcgcgtac
     2281 gccatcgctt tagtttggcg gcggatttcg tcttggattt cttcgcttaa ggagtagggc
     2341 ggcagcgagc agccggagtc gccggagtgg atgcccgcct gttcgacgtg ctgcatgatg
     2401 ccgccgataa ccacgtcttt gccgtctgaa acgcagtcca catccacttc aatcgcgttg
     2461 ttgaggaaga aatcgagcaa cacggggctg tcttcggaaa cctgcacggc ttcgcgcatg
     2521 tatttttgca aggcttcggc agagtggaca atctgcatcg cgcgtccgcc caaaacataa
     2581 gacgggcgca cgaccagcgg atagccgatt tcttcggctt tgacgagtgc ttcttcttcg
     2641 ttgtgggcga tgcggttggg cggttggcgc agacctaagt cgttcaacac tttttggaag
     2701 cgttcgcggt cttcggcggc gtcgatgctg tcggcggacg tgccgatgat gtttacgccg
     2761 ttttcaacca gcgcgttggc gagtttgagc ggggtttgac cgccgtaatg cacaatcacg
     2821 ccccacgggt tttcggtgcg gacgatttcc aacacgtctt ccaatgtcag cggctcgaaa
     2881 tagaggcggt cgctggtgtc gaagtcggtg gacacggttt ctgggttgca gttgaccata
     2941 atcgtttcaa aaccggattc gcgcagggcg agcgcggcgt gaacgcagca gtagtcaaac
     3001 tcgatgccct gaccgatgcg gttcgggccg ccgccgagaa tcatcacttt tttacggtcg
     3061 gaaggacggg attcgcattc ttcttcgtaa gtggagtaaa gataggcggt ttcggtggcg
     3121 aactcggcgg cgcaggtgtc aacgcgtttg taaaccggat gcagcttcag cgcgtagcgg
     3181 tgttcgcgca cttctttttc ttttacgccc aaaagctgcg cgatgcgttt gtcggagaag
     3241 cctttgcgtt tcagacggcg tagggcggcg aaatccaaat cactcaaaat gccgtctgaa
     3301 accgattttt cttctttcac caagtcttcg atttgcgcca agaaccaagg gtcgatggcg
     3361 cagatttcgt ggatttcttc cggcgtgaag cccgcgcgga acgcgtctgc cacaaacagc
     3421 atgcgctcgg ggccggggtt tgccagttcg cggcggattt ccgctttgtc ggagcttctc
     3481 ggattgaagc cgcacaagcc tgtttccaag ccgcgcaggg ctttttggaa actttcctga
     3541 atcgtgcgtc ccatcgccat cacttcgccc accgatttca tctgcgtggt caggcggtcg
     3601 tctgcggcag ggaatttttc aaacgcaaaa cgcgggattt tggttaccac atagtcgatg
     3661 gacggctcga atgacgcggg ggttttgccg ccggtgatgt cgttgcgcaa ctcgtccagc
     3721 gtaaagccga ccgccagttt cgccgccacc ttcgcaatcg ggaagcccgt cgctttggaa
     3781 gccagcgcgg atgaacggct cacgcgcggg ttcatctcaa tcacaatcat ctcgccgttt
     3841 tcagggttca ccgcaaactg cacgtttgag ccacccgtgt ccacgccgat ttcgcgcaat
     3901 actgccaacg aagcattacg catgatttgg tattctttgt ctgtcaatgt ttgcgccggc
     3961 gcaaccgtaa tcgagtcgcc cgtatgcacg cccatcgggt cgaagttttc aatcgagcaa
     4021 atgatgatgc agttatcgtt cttatcgcgc accacctcca tctcgtactc tttccagccg
     4081 aggacggact gctcaatcag cagctcgtgc gtgggcgacg catcgaaacc gcgttcgcaa
     4141 atcgccaaaa actcgtcttt attgtaggca atgccgccgc ccgaaccgcc catcgtgaaa
     4201 gacggacgaa tcagcgtcgg gaagccgacc tgttcttgcg ccgccaaggc ttcgttcatc
     4261 gtgtggcaga caaaagattt cgggcaagac aaaccgattt tttccatcgc ttctttaaag
     4321 cggccacggt cttccgcctt gtcaatcgcg tcttctgtcg cgccgattaa ctcgacgttg
     4381 tatttcgcca gcacgccgtt gcgcgccaaa tccagcgcac agttcagcgc ggtctggccg
     4441 cccatcgtgg gcagaatcgc atcgggccgc tctttggcga taatcttctc caccgtctgc
     4501 cacataatcg gctcgatgta ggtaacatcc gccatttcag ggtcggtcat gatggtggcg
     4561 gggttggagt ttaccaaaat gactttatag ccttcttcac gcaaagcctt gcaggcctgt
     4621 gcgcccgaat agtcaaattc gcaggcctga ccgataacga tagggccggc gccgatgata
     4681 aggatggatt ttaggtcggt acgtttgggc atggtgggtc tttcttttga agaatttgga
     4741 ttattgacga ttggtaactt ctctaattat ttctgcatct gttttttcat cgcttggatt
     4801 atctgaaaag aaaaaactgt aattactatc ggctttaaat ttttcgtata gctctgggcg
     4861 caaaattttt gctttttcac tattttccac gctcctgcga ttaggcttgc cagccttatc
     4921 tttcccattt ctacggacat catagcaata aatagtgtta ggagaattag gttctaaacg
     4981 agtagctaca atctttttat aaattatgtc taaatctttt ttagtttgtg ttggaatgaa
     5041 atctgcaaaa agattactaa aactctgaaa aatttctctg attttcgcag caccagcctg
     5101 aacattaatt ttaaaaaaat taataaaatc agtagcactt ttaaaatgaa cttcataaaa
     5161 atcagcatac gcaaatattg aattttcact attcaaatta aaaaactcta attttgcttg
     5221 tgcataatca tctggtctag gttcatcagg tttataccta gtcaaaataa cggcgtattg
     5281 cctttgatta taattaaaag gaaatgcttc aattattcta tttttgtttc tcatatcatt
     5341 aagcaaatac tttaagttat tgaaattaat aggtattgac atatttaaac tcctgcgaat
     5401 atgttgcaat aaacgtagca atcgtaggtt gggttgaaaa cccaacacaa accgcttaat
     5461 tgtctaaaat gttgggtttg ctaacctaac ttgtatatcg aaacccccgt atcgtagcaa
     5521 gccgtagccc gtatgtaggg tatgtgcggt acgtatgcac gcgttctcca ttttccctgc
     5581 aaccccaacc caccgcgtgc gtgccttgcg gcacactctc tgccgatgag ttcaaaggtc
     5641 gtctgaaaaa acgttcgcaa cgtttgttcc acctgccttg cgataaaggc tgcctgaaac
     5701 attcccgctg tcgatgtttc gggcattctt tttcagacga cctgcaacgc ctgaatctgc
     5761 tgcaacctac cccctccccc gtgggggagg gctggggaga gggcattctc cgaatttcgg
     5821 caacctttcc taacactcta accgccaaga cacaagcctt gtggcttgtt gccctctctc
     5881 taactctctc ccacgggaga gaggactggg cggttgttgg ggctaaggtt tctgtaaact
     5941 aatcaggtta tgcaggctgc tttttgtttt tcagacggcc tttataaatg ctcaattcag
     6001 tcggctttat cctattattt tcaataatcc aatcaaaatc agccatctgc tatcgtgcag
     6061 cttgcttttc caattcttgc aacacgagca ggatttctgt cagcacatcg tttgtctgct
     6121 gtaaaatctc gtgattccaa aaccgcagta cggtaaagcc caagctgttg agatatgccg
     6181 tccgcgcgtg gtcgtatgcg gcttgttctg tgtgctgccc tccgtctgct tcgacaatca
     6241 acttgggcgt tacgcacata aaatcaacaa tatagtttcc catcggctgc tggcggcgga
     6301 atttatagcc gttcagacga cctgcccgca ggtgctgcca caattttgct tccgccccgc
     6361 tcatttcttg gcgcatggct ttggcgcgtt ggcgcaagat ggggttgtcg gtggtcaaga
     6421 gtttctcgtg cgggttcatt ttgttgtcgt gctgtttgct gccctctctc taactctctc
     6481 ccacggggag agaggacggg gcggttgttg gggttaaagg ggctgtaagg aaaacaagtc
     6541 gttcaggcca ctttttactt ttcagacgac ctgcaatcaa cggttgtaaa tccaagttgc
     6601 ttttcaaacc gcctgtaacc gcaaaacttg ctgcaaccta ccccctcccc cgtgggggag
     6661 ggctggggag agggcattct tcgaatttcg gcaaccttcc ccaacaccct aaccgcccaa
     6721 acacaagcct tgctgtttgt tgccctctct ctaacgcttt cccacaggga gacaggacgg
     6781 ggcggctgta gtgattaagg gttttgcaag gaaaacaagg aaaacaagtt gtacaggctg
     6841 tttttttatt tttcaagcga cctgaaatca acgcttgtaa atccaagtcg cttttcaaac
     6901 tgcctgcaac cgcaaaatct gctgcaacct accccctccc ccgtggggga gggctgggga
     6961 gagggcattt tccaagttgc ggcaatcttt cccaaatccc ttagtcttct aaaatacaag
     7021 ccttacggtt gttgccaaat gaaacttctt ccatacccaa aacttgcgtg taaaacgcaa
     7081 tggttcggtc aatgtcggca acggtcagta ccagatggtc gagtgcgcta atcttcattt
     7141 cccgctttct ttttcaggcg gcggcagtgc cgtctgaaag ccattatgcc cgttttgccg
     7201 ctttcatatt gccaatgaat ttgtcaaaca aatagccgac atcttgcggg ccggggctgg
     7261 cttcggggtg gccttggaag cagaacacag gtttgtcggt cagctcgatg ccttgcaaag
     7321 tgttgtcaaa caaggatttg tgggtaatgc gtgcgttagc gggcagggtg tcggcatcaa
     7381 cggcaaaacc gtggttttgg ctggtgatga cgactttgcc gctgtccaaa tcttgcacag
     7441 ggtggttcgc accgtggtgg ctgaagcgca ttttcagggt tttcgcgccg atagcgaggc
     7501 tgatgagctg gtgtcccaag cagatgccga aaatcggttt gccgctttcc atcagttttt
     7561 gcacggcttc gatggcgtag gtgcaaggct cggggtcgcc ggggccgttg gacaggaaca
     7621 cgccgtcggg attgagtgcc aacacgtctt gtgcgctcgt ttgggcgggg acgacggtca
     7681 ggcggcagcc gcgcgaggcg agcatacgca ggatgttggt tttcacgccg aaatcgtagg
     7741 cgacgacgtg gtaaggctgt tcgtcagggg taacgaaacc cttgcccaat gcccattcac
     7801 cttccgtcca ttcgtaagtt tccgtgcagg aaacttcttt tgccaagtct ttgccgacca
     7861 tgctgccgaa cgcggcgatg agttcttgcg ctttttcgac cgtagcgtcc gcgccggtca
     7921 gaatcgcacc gccttgcgcg cctttttcac gcaacagcgt ggtcaggcgg cgggtgtcga
     7981 tgtcggcgat ggcaacggtt tggttgcgca ccagatagtc gtgcaggctt tcggaggcgc
     8041 ggaagttgct gtgcaagagc ggcaggtcgc ggataatcaa accggcggcg taaacgctgc
     8101 ggctttcttc atcttcggcg ttggtaccgg tattgccgat gtgtgggtag gtgagggtaa
     8161 cgatttgttt gcagtaggac gggtcggtca ggatttcctg atagccagtc atcgaagtat
     8221 tgaacacgac ttcgccggaa gtcgaacctt cgtaaccgat tgatgtgccg tggaatacgc
     8281 tgccgtcagc gaggacgagg agggcggggg tgctcatgat gggaatcctg tttttaataa
     8341 aattcttgac aatgccgtct gaagggactt cggcaggggg catccggtcg gaaaaatccg
     8401 gtcaaaaaaa aacacgccgc gcaagataga cgcgtaacgt gcttttcggg caagtgccta
     8461 taccctgaaa gcagcatatt ttaagacgaa acatacccga tttcaagcgc aaacgcggca
     8521 ggcgggctga tatgttcgcg cgaaaacgga aatccgtggc gtaaaaccgc ccgctccgcg
     8581 cccactatgc ccgttacgca tttccccacg tccgtccggc gaaactatgg gaatacccga
     8641 atcgtcattc ccacgaaagt gggaatccag ttttttgagt ttcagtcatt tccgataaat
     8701 tgccttagca ttgaatgtct agattcccgc ctgcgcggga atgacgcgtt tcatttgccc
     8761 ccatcccgaa aacgcaaaca ataccgtctg aaagctctgt agggagggct tcagcccacc
     8821 gattccatca atcccacatt tccgccgttt tcaccgaatc cgcccctttt cacaatccag
     8881 tcctacgcaa ctgaaccgtc attc
//
LOCUS       DBBZXU010000081         8589 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.081, whole genome shotgun sequence.
ACCESSION   DBBZXU010000081 DBBZXU010000000
VERSION     DBBZXU010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8589
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.081"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(209..937)
                     /gene="rmpM"
                     /locus_tag="ACJJDE_001579"
     CDS             complement(209..937)
                     /gene="rmpM"
                     /locus_tag="ACJJDE_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding outer membrane protein
                     RmpM"
                     /protein_id="HGG7541479.1"
                     /translation="MTKQLKLSALFVALLASGTAVAGEASVQGYTVSGQSNEIVRNNY
                     GECWKNAYFDKASQGRVECGDAVAAPEPEPEPEPAPAPVVVVEQAPQYVDETISLSAK
                     TLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSERRAYV
                     VANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIEPD
                     RRVDVKIRSIVTRQVVPAHNHHQH"
     gene            1301..2251
                     /locus_tag="ACJJDE_001580"
     CDS             1301..2251
                     /locus_tag="ACJJDE_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002230250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CysB family HTH-type transcriptional regulator"
                     /protein_id="HGG7541480.1"
                     /translation="MKLQQLKYALEVYQHNLNVSEAAEALFTSQPGISKQIKLLEEEI
                     GIQIFIRSGKRVVSVSQPGKVVLDIAERILRDVQNIKNIGSEFTGQDSGSLTVATTHT
                     QARYALPLIVADFVKRYPKVNLTIKQGSPAAIARMVTSGEADLAIVTERIDDHPELGK
                     LPCYDWTHAVIVPNDHPLLECRNPLRIEDLARFPLITYEFAFNAGSSIARAFSKARLE
                     QPDVALAAADTDVLKTYVRLGLGVGLMAKMAYNPDTDGDLQLVDAAHLFEPSPTWIAL
                     RSDTYLRGYAYDFIQAFAPHLTREKVDRILYTPISEDFSI"
     gene            complement(2364..3098)
                     /gene="fnr"
                     /locus_tag="ACJJDE_001581"
     CDS             complement(2364..3098)
                     /gene="fnr"
                     /locus_tag="ACJJDE_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate/nitrate reduction transcriptional
                     regulator Fnr"
                     /protein_id="HGG7541481.1"
                     /translation="MASHNTTHQMKTLCSSCSLRELCLPVGLLPNELSQLDAVIRQSR
                     RLKKGEYLFCVGEAFTSLFAIRSGFFKTTVASQDGRDQVTGFFMSGELIGMDGICSHV
                     HSCDAVALEDSEVCELPFTHIEELGQNIPSLRTHFFRMMSREIVRDQGVMLLLGNMRA
                     EERIAAFLLNLSQRLYSRGFAANDFILRMSREEIGSYLGLKLETVSRTLSKFHQEGLI
                     SVEHKHIKILNLQVLKKMVSGCSHAI"
     gene            3301..4722
                     /gene="hemN"
                     /locus_tag="ACJJDE_001582"
     CDS             3301..4722
                     /gene="hemN"
                     /locus_tag="ACJJDE_001582"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003684340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HGG7541482.1"
                     /translation="MKIIQIQNNHNVNDDRPEFDRALIASLPASGPRYTSYPTADRFH
                     DGFREGEYIKALHLRGMGALNKPLSLYIHIPFCNTICYYCGCNKIITKDKSRADAYIE
                     YLEKEMELLAPHLNGRHQLAQLHFGGGTPTFLSDEQIERVFRMIRKHFELIPTGEYSI
                     EIDPRKVSRDTVLMLGRLGFNRMSIGIQDFDPKVQAAVNRIQSYEETKEVIDAAREAG
                     FKSVSVDLIYGLPHQTSESIKTTIDTVLSLDPDRLALYHYAHLPHVFKPQRRIDTAAV
                     PDSEEKLDMLQYCVQTLTERGYVFIGMDHFAKPDDELSIALKEGFLQRNFQGYSTYAD
                     CDLVAIGVSSIGKIGSTYSQNERDIDAYYAAIDEGRLPIMRGYQLNQDDILRRNIIQD
                     LMCRFALDYRIYESMFGIPFDRYFKDELADLEKLAGLGLVRLNSHGLTVTPKGRFLIR
                     NIAMVFDYHLRHKETKAKYSQTV"
     gene            complement(5075..6649)
                     /locus_tag="ACJJDE_001583"
     CDS             complement(5075..6649)
                     /locus_tag="ACJJDE_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0006817 - phosphate ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HGG7541483.1"
                     /translation="MAQIQMSANVKTINAVFAAMLVGTVGYFIYWGLGYTHYNYAALF
                     IIATMFGVFMAFNIGGNDVANSFGTSVGAGTLTIPQALLIAAVFEVSGAVIAGGEVTN
                     TIRKGIVDLKGVDFEPIQFVFIMMSALLAAALWLLFASKKGLPVSTTHSIIGGIVGSA
                     VCMAVMNDAASGDLIRWGKLGGIGVSWVLSPVLGGAVSYFLFSRVKKNVLDYNAWAEG
                     TLKGIKQEKKAYKERHRLFFEGLSEAEKVEYATKMAHDAQIYDEPEFDPQELQSEYYR
                     GLYAFDNRKNNVDSYKALHSWIPFIASFGAMMISAMLIFKGLKNLHLGMSNVNSFLTI
                     FMIGAAVWMGTFVFAKSLKRKDLGKSTFQMFSWMQVFTACGFAFSHGANDIANAIGPF
                     AAIMDVLRTNSVAAQNVVPPIAMLTFGIALIVGLWFVGKEVIKTVGTSLAEMHPASGF
                     TAELSAASVVMGASLMGLPVSSTHILVGAVLGIGLVNRNANWKLMKPIGLAWVITLPA
                     AAVLSVVCYLVLQAVF"
     gene            6974..8074
                     /locus_tag="ACJJDE_001584"
     CDS             6974..8074
                     /locus_tag="ACJJDE_001584"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_process: GO:0006040 - amino sugar metabolic process
                     [Evidence IEA];
                     GO_process: GO:0009254 - peptidoglycan turnover [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HGG7541484.1"
                     /translation="METQLYIGIMSGTSMDGADAVLVRMDGGKWLGAEGHAFTPYPDR
                     LRRQLLDLQDTGTDELHRSRILSQELSRLYAQTAAELLCSQNLAPSDITALGCHGQTV
                     RHAPEHGYSIQLADLPLLAERTRIFTVGDFRSRDLAAGGQGAPLVPAFHKALFRDDRE
                     TRAVLNIGGIANISVLPPDAPAFGFDTGPGNMLMDAWTQAHWQLPYDKNGEKAAQGNI
                     LPQLLDRLLAHPYFAQPHPKSTGRELFALNWLETYLDGGENRYDVLRTLSRFTAQTVF
                     DAVSHAAADARQMYICGGGIRNPVLMADLAECFGTRVSLHSTAELNLDPQWVEAAAFA
                     WLAACWINRIPGSPHKATGASKPCILGAGYYY"
     gene            8193..>8589
                     /gene="mafA"
                     /locus_tag="ACJJDE_001585"
     CDS             8193..>8589
                     /gene="mafA"
                     /locus_tag="ACJJDE_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7541485.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALT"
BASE COUNT         2171 a         2462 c         2081 g         1875 t
ORIGIN      
        1 cggcaatggg acacaaacct gaatctgaat ccgaacctgc accccgattc tgacgatagc
       61 cgtttcagaa aaccacccaa aaaaacaaac cccgcaaaag cgggggtttg tttcacatca
      121 tcgatgccga ccgacgtttc acgaatattg caacagtacc tggtacaaaa tccactaacc
      181 tcatgcatcg gcaagatatt gcctagcctt agtgttggtg atgattgtgt gccggcacaa
      241 cctgacgggt tacgatgctg cggattttca catccacacg gcggtcaggt tcgatacatg
      301 caatcagagc ctcacgtttt ttggctttag agactttcgc acccagtttg gcaacttcgg
      361 cttcacaaac ttgagtcatt tgcgcttgag attcgcccaa gccgacagca gaaattctag
      421 aaacaggtac gccgttgctg accaggttgt ttgccactac gtatgcgcgg cgttcggaca
      481 gggcctgatt gtatttgtca gaacccataa agtcggtatg gccttcgacg cggacagatt
      541 ggatattggt ttgacccagg cgttgcgcca atactttcag gttgtcttga gcttcggcgc
      601 gcaatgaatc cttatcgaaa ccgaacaggg ttttggcaga cagggaaatg gtttcatcaa
      661 catattgcgg agcctgctcc acaacgacga caggagcggg tgcgggttcg ggttctggct
      721 cgggttcggg ggcagcaacc gcatcgccgc attctacgcg accttggctt gctttatcaa
      781 agtaggcgtt tttccagcat tcgccatagt tgttgcgtac gatttcgttc gactggccgc
      841 ttacggtgta accctgaacg gacgcctcgc ccgcaacagc agtgccggaa gcgagcaatg
      901 caacgaataa tgcgcttaat ttcagctgtt tggtcatttt attccctcat taaatttgta
      961 cagcagatac agaagcaact gctgaattgc caacatacag gccgctgtag aaacatggcg
     1021 gcaaatcgga tatttcagtc tccactataa agaagcaggg ggaggactgt caatactcaa
     1081 cgcctgaaaa caaccgtaaa acagcctgtt tcctgatagt ctatcatgcc gaaaaatcaa
     1141 ttccgtgtca ttactttagg gggatttttt ccatatcgca cgattgccgt tgcacaaaaa
     1201 caacaaacac aacggcaaag ccccataccg taccggcaag aaaatatgat aaattataaa
     1261 caatgttcag ccacccgaca cagacccaca ccgacccgcc atgaaattac aacaattgaa
     1321 atacgcctta gaagtttacc agcacaacct gaacgtttcc gaagcggccg aagccttgtt
     1381 tacttcgcaa cccggcatct ccaaacaaat caaattgctg gaagaagaaa tcggcattca
     1441 gatttttatc cgcagcggca agcgcgtggt ttcggtctcg cagccgggca aggtggtttt
     1501 ggatattgcg gaacgtattt tacgcgatgt acagaacatt aaaaatatcg gcagcgagtt
     1561 taccggacag gacagcggtt cgctgacggt tgccacgacg catactcagg cacgctatgc
     1621 cctacccttg attgttgccg attttgtgaa acgctatccg aaagtcaacc tgaccatcaa
     1681 acaggggagc cctgccgcca tcgcacgtat ggttacctca ggcgaggcgg acttggcgat
     1741 tgttacggaa cggatagacg accatcccga actgggaaaa cttccctgct atgactggac
     1801 tcatgcggtt atcgtaccga acgaccaccc cttgctcgaa tgcagaaacc ccctccgcat
     1861 tgaagatttg gcgaggtttc cgctgattac ttatgaattt gcattcaatg cgggcagcag
     1921 catcgcgcgg gcattttcca aagcccgttt ggaacagccg gatgtcgcat tggcggcggc
     1981 ggatacggac gtattgaaga cttatgtgcg cttgggtttg ggcgtgggac tgatggcgaa
     2041 aatggcgtac aacccggata cggacggcga tttgcagctt gtggatgcgg cacacctgtt
     2101 cgagccgtcg ccgacgtgga ttgctttgcg cagcgatact tatttgcgcg gatatgccta
     2161 cgactttatc caagcgtttg cgccgcacct gacacgcgag aaggtggata ggattctgta
     2221 cacgcccatc agcgaggatt tttcgattta ggcggctgcc ggttttcaga cggcactttg
     2281 cggcagatac aacaaacagg acagatgttt tcgtctgccc tgtgtttatt gagaatgccg
     2341 tctgaaatgt tcgtacgggt taatcaaatg gcgtgcgaac aaccggatac catcttcttc
     2401 aacacctgca gattgaggat cttgatgtgt ttgtgttcga cggaaatcaa tccttcctga
     2461 tgaaatttag ataatgtgcg gctgacggtt tcaagtttca gcccgagata actgccgatt
     2521 tcttcgcggg acattcttaa gatgaagtcg ttggcagcaa aacctcggga ataaaggcgt
     2581 tgggaaaggt tcaacagaaa ggcggcaatc cgctcttcgg cgcgcatatt gcccaacagc
     2641 agcataacac cttggtcgcg cacgatttca cgactcatca tgcggaaaaa gtgggtacgc
     2701 aggctgggga tattctgccc cagttcttcg atgtgggtaa acggcagttc gcacacttcg
     2761 ctgtcttcca aggcgaccgc gtcgcaactg tgcacatggg aacagatgcc gtccatgccg
     2821 atgagttcgc ccgacataaa gaaacccgtt acctgatcgc ggccgtcctg actggcgacg
     2881 gttgttttga agaagcccga acggatggca aagagcgagg taaaggcttc gccgacacag
     2941 aacaggtatt cgcccttttt caggcggcgg ctttgacgga tgacggcatc gagttggctg
     3001 agctcgttgg gcagcagccc gacaggcagg cagagttccc gcaaagaaca ggaagaacac
     3061 agcgttttca tctgatgtgt agtattatgc gaagccatac cgtacctttt tgtgcgcttt
     3121 gccccatcat gattatagtg gattaaattt aaaccagtac ggcgttgcct cgccttgtcc
     3181 ttatttaaat ttaatccact atatgtgctt attgacacat atcaagacag gtttatcata
     3241 ctgtggcatt ctaccaaact atccaaaatt tgactaacat cataaaaccg cacacacacc
     3301 atgaaaatca ttcagataca gaacaatcac aatgtaaacg atgaccgccc cgagtttgac
     3361 cgcgcgctga ttgccagcct gcccgccagc ggcccgcgct acacttccta ccctaccgcc
     3421 gaccgtttcc atgacggttt ccgcgaaggc gaatatatca aagctttaca tttgcgcggt
     3481 atgggcgcgt taaacaaacc gctttccctt tacattcaca ttccgttctg caacaccatc
     3541 tgctactact gcggctgcaa caaaatcatc accaaagaca aaagccgcgc cgatgcctac
     3601 atcgaatatc ttgaaaaaga aatggaactg ctcgctccac atctgaacgg acggcaccag
     3661 cttgcccaac tgcacttcgg cggcggcacg ccgacctttt tgagcgacga acagatcgaa
     3721 cgtgtcttcc gcatgatacg caaacatttc gagttaatcc ccaccggcga atactccatc
     3781 gaaatcgacc cgcgcaaagt cagccgcgac accgtcctca tgctcggcag actcggcttc
     3841 aaccgcatga gcatcggcat tcaggatttc gaccccaaag tgcaggcggc ggtcaaccgc
     3901 atccaaagtt acgaagaaac caaagaagtc atcgatgcgg cgcgcgaagc ggggttcaaa
     3961 tccgtcagcg tcgatttgat ttacggcctg ccgcaccaga cttcggaaag catcaaaacc
     4021 accatcgata ccgttttgtc gctcgatccc gaccgcctcg ccctttatca ctacgcccac
     4081 ctgccgcacg tgttcaaacc gcaacgccgc atcgataccg ccgccgttcc cgacagcgaa
     4141 gagaagctcg atatgctgca atactgcgtc caaaccctaa ccgaacgcgg ttacgtcttc
     4201 atcggcatgg accatttcgc caaacctgac gacgaactct ccatcgccct caaagaaggc
     4261 ttcctccagc gcaacttcca aggctattcg acctacgcgg attgcgattt ggtcgccatc
     4321 ggcgtgtcgt ccatcggcaa aatcggcagc acctattccc aaaacgaacg cgacatcgat
     4381 gcctactatg ccgccatcga cgaaggcaga ctgcccatca tgcgcggtta tcagctcaat
     4441 caggacgaca tcctgcgccg caacatcatt caggatttga tgtgccgctt cgcgctcgac
     4501 tatcggattt acgaaagtat gttcggcatc ccgttcgacc gctacttcaa agacgaactg
     4561 gcggatttgg aaaaactcgc cggtttggga ttggtgcgcc tgaacagcca cgggctgacc
     4621 gttaccccga aaggacgctt cctcatccgc aacatcgcca tggtcttcga ttaccacctg
     4681 cgccacaaag aaaccaaggc gaaatattcg caaacggtgt gattgcgtct aacgtacaaa
     4741 tgccgtctga aaggcttttt cagacggcat tttgctgccg gcaggataag tgttttcaag
     4801 aacaggcggc ggcatatcat aacgttccgc acctttgtgt ccgaccgttc cgaaaccaag
     4861 atatagtgga ttaacaaaaa ccagtacagc gttgcctcgc cttgccgtac tatctgtact
     4921 gtctgcggct tcgtcgcctt gtcctgattt ttgttaatca ctataccaaa cggcatatcc
     4981 cgacagaaca gattgcgcat aaggcacaag cccgcacatt ccatcaacaa aatgccgtct
     5041 gaacacgggt tcagacggca tcagtatttt acaatcagaa tactgcctgt aaaaccaagt
     5101 agcagacaac cgacaatacg gcggcggcag gcagggtaat gacccacgcc aaaccgatgg
     5161 gcttcatcag tttccaattg gcattacggt tgaccagacc gataccgagt accgcgccga
     5221 ccaagatatg cgtactggac acgggcagcc ccatcagcga cgcgcccatc acgacagatg
     5281 cggcggacag ttcggcagta aaacccgagg cggggtgcat ttccgccaaa ctcgtaccga
     5341 cggttttaat cacctcttta ccgacaaacc acaaaccgac aatcagcgcg ataccgaaag
     5401 tcagcatcgc aatcgggggg acgacatttt gcgcggcaac gctgttggta cgcaaaacat
     5461 ccataatcgc ggcaaacgga ccgatggcgt tggcgatatc gttcgccccg tggctgaatg
     5521 cgaagccgca ggcggtaaag acctgcatcc atgaaaacat ctgaaaggtc gatttgccca
     5581 agtctttacg cttgaggctt ttggcaaaaa caaacgtccc catccacacc gccgcgccta
     5641 tcataaagat ggtcaggaag ctgttgacgt tgctcatccc caaatgcagg tttttcaagc
     5701 ccttgaaaat cagcatagcg gaaatcatca tcgcgccgaa cgaagcgata aagggaatcc
     5761 aagaatgcag cgctttgtag gaatcgacat tgtttttacg gttgtcgaac gcataaagac
     5821 cgcggtaata ctccgattgc agctcttgcg gatcgaattc gggttcgtcg taaatttgcg
     5881 cgtcgtgcgc cattttggtg gcgtactcga ctttttcggc ttcggacaaa ccctcgaaaa
     5941 acaggcggtg ccgttcttta taggcctttt tttcctgctt gatgcccttg agcgtgcctt
     6001 ccgcccaagc gttgtaatct aagacgtttt tcttgacgcg cgaaaacagg aaataggaca
     6061 ccgcgccgcc caacacgggc gacaataccc aagaaacacc aataccgccc agcttgcccc
     6121 aacgtatcaa atcgcccgat gcggcatcgt tcattaccgc catacatacc gcgctgccga
     6181 caatgccgcc gataatggaa tgggtggtag ataccggaag cccttttttc gaggcaaaca
     6241 acagccacaa cgccgccgcc aaaagcgcgg acatcataat aaacacaaac tgtatgggtt
     6301 cgaaatcaac acccttcaaa tcgacgatgc ctttgcgtat ggtattggtt acctcaccgc
     6361 ccgcgatgac cgcgccgctg acctcaaata ccgccgcaat cagcaaagcc tgcgggatgg
     6421 tcagcgtacc cgcaccgacg ctggtgccga aagaattggc aacatcgttg ccgccgatgt
     6481 tgaacgccat aaacacgccg aacatcgtgg caataatgaa taaggcggcg taattgtaat
     6541 gggtataacc caagccccaa taaataaaat agccgactgt acctaccagc atggcggcaa
     6601 agacggcgtt gatggtttta acatttgcgc tcatttggat ttgagccatg gcaatcttcc
     6661 tttaatgtgg tggaaatcat gagtgttgcc gacactgtac tgctgcctcc ggtcgaactg
     6721 ccgtttcggg atatggcaga cgcatccttc cttctgaacc gcatccgaat acccccaaac
     6781 ctgaccgaat gcaaaactgc tgccggaaac ggtttgtatg acacttctac tactggatgt
     6841 tgcgggcgca ttataatatt tttccatccg tcttgaaaca tttatttaca ctttatttac
     6901 actgcggcgg caaatcggta tacgagcgtc aatacacgtt aaaatggcgt tttgcaccag
     6961 tttgggagtg atgatggaaa cacagcttta catcggcatc atgtcgggaa ccagtatgga
     7021 tggggcggat gccgtgctgg tacggatgga cggcggcaaa tggctgggcg cggaagggca
     7081 cgcctttacc ccctatcccg acaggctgcg ccgccaattg ctggatttgc aggacacagg
     7141 cacagacgaa ctgcaccgca gcaggatttt gtcgcaagaa ctcagccgcc tatatgcgca
     7201 aaccgccgcc gaactgctgt gcagtcaaaa cctcgcgccg tccgacatta ccgccctcgg
     7261 ctgccacggg caaaccgtcc gacacgcgcc ggaacacggt tacagcatac agcttgccga
     7321 tttgccgctg ctggcagaac ggacgcggat ttttaccgtc ggcgacttcc gcagccgcga
     7381 ccttgcggcc ggcggacaag gtgcgccgct cgtccccgcc tttcacaaag ccctgttccg
     7441 cgacgacagg gaaacacgcg cggtactgaa catcggcggg attgccaaca tcagcgtact
     7501 cccccccgac gcacccgcct tcggcttcga cacagggccg ggcaatatgc tgatggacgc
     7561 gtggacgcag gcacactggc agctgcctta cgacaaaaac ggtgaaaaag cggcacaagg
     7621 caacatattg ccgcaactgc tcgacaggct gctcgcccac ccgtatttcg cacaacccca
     7681 ccctaaaagc acggggcgcg aactgtttgc cctaaattgg ctcgaaacct accttgacgg
     7741 cggcgaaaac cgatacgacg tattgcggac gctttcccga ttcaccgcgc aaaccgtttt
     7801 cgacgccgtc tcacacgcag cggcagatgc ccgtcaaatg tacatttgcg gcggcggcat
     7861 ccgcaatcct gttttaatgg cggatttggc agaatgtttc ggcacacgcg tttccctgca
     7921 cagcaccgcc gaactgaacc tcgatccgca atgggtagaa gccgccgcat ttgcgtggtt
     7981 ggcggcgtgt tggattaacc gcatccccgg tagtccgcac aaagcaaccg gcgcatccaa
     8041 accgtgtatt ctgggcgcgg gatattatta ttgagcgcaa ataccgtctg aaagccattt
     8101 ccgccgctca gacggcattt tcgccccttt tgtttacaaa cccttaaaat ccatttacac
     8161 tcaaactcgt tcaaaacaaa acaaaccctg ccatgaaaac cctgctcctc ctcatccccc
     8221 tcgtcctaac cgcctgcggc acactgaccg gcatacccgc ccacggcggc ggcaaacgct
     8281 ttgccgtcga acaagaactc gtcgccgcat cgtcccgcgc cgccgtcaaa gaaatggact
     8341 tgtccgccct gaaaggacgc aaagccgccc tttacgtctc cgttatgggc gaccaaggtt
     8401 cgggcaacat aagcggcgga cgctactcta tcgacgcact gatacgcggc ggctaccaca
     8461 acaaccccga aagtgccacc caatacagct accccgccta cgacactacc gccaccacca
     8521 aatccgacgc tctctccagc gtaaccactt ccacatcgct tttgaacgcc cccgccgccg
     8581 ccctgacga
//
LOCUS       DBBZXU010000082         8563 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.082, whole genome shotgun sequence.
ACCESSION   DBBZXU010000082 DBBZXU010000000
VERSION     DBBZXU010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8563)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8563)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8563
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.082"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(78..596)
                     /locus_tag="ACJJDE_001586"
     CDS             complement(78..596)
                     /locus_tag="ACJJDE_001586"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase, GntK/IdnK-type"
                     /protein_id="HGG7541486.1"
                     /translation="MTTHFVVMGVCGCGKTTAALSLQKHLGQCPYAEGDEFHTQANRD
                     KMGAGIPLTDEDRYPWLGNLRDWMTKQAQNGANHTIVTCSALKRGYRDILRGAEGKAA
                     FIHLSPPQDINLERMMSRKGHYMKAGMLDSQLEILEELGEGEYGVKIANPGTPEAVEA
                     DILNWVASENLL"
     gene            complement(616..2001)
                     /locus_tag="ACJJDE_001587"
     CDS             complement(616..2001)
                     /locus_tag="ACJJDE_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003705069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HGG7541487.1"
                     /translation="MDGWTQTLSAQTLLGISAAAIILILILIVKFRIHALLTLVIVSL
                     LTALATGLPTGSIVNDVLVKNFGGTLGGVALLVGLGAMLGRLVETSGGAQSLADALIR
                     MFGEKRAPFALGVASLIFGFPIFFDAGLIVMLPIVFATARRMKQDVLPFALASIGAFS
                     VMHVFLPPHPGPIAASEFYGANIGQVLILGLPTAFITWYFSGYMLGKVLGRTIHVPVP
                     ELLSGGTQDNDLPKEPAKAGTVVAIMLIPMLLIFLNTGVSALISEKLVSADETWVQTA
                     KTIGSTPIALLISVLVALFVLGRKRGESGSALEKTVDGALAPVCSVILITGAGGMFGG
                     VLRASGIGKALADSMADLGIPVLLGCFLVALALRIAQGSATVALTTAAALMAPAVAAA
                     GFTDWQLACIVLATAAGSVGCSHFNDSGFWLVGRLLDMDVPTTLKTWTVNQTLIALIG
                     FALSALLFAIV"
     gene            2240..3781
                     /locus_tag="ACJJDE_001588"
     CDS             2240..3781
                     /locus_tag="ACJJDE_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HGG7541488.1"
                     /translation="MDGRRWAVWGAFALLPSAFLAVMVVAPLWAVAAYDGLAWRAVLS
                     DAYMLKRLAWTVFQAAATCVLVLPLGVPVAWVLARLAFPGRALVLRLLMLPFVMPTLV
                     AGVGVLALFGADGLLWRGRQDTPYLLLYGNVFFNLPVLVRAAYQGFVQVPAARLQTAR
                     TLGAGAWRRFWDIEMPVLRPWLAGGVCLVFLYCFSGFGLALLLGGSRYATVEVEIYQL
                     VMFELDMAVASVLVWLVLGVTAAAGLLYAWFGRRAVSDKAVSPVMPSPPQSVGEYVLL
                     AFAAEVLSVCCLFPLLAIVVKAWSAGESWRVLMESETWQAVWNTLRFSAAAVFAAAVL
                     GVVYAAAARRSAWMRGLMFLPFMVSPVCVSAGVLLLYPQWTASLPLLLAMYALLAYPF
                     VAKDVLSAWDALPPDYGRAAAGLGANGFQTACRITFPLLKPALRRGLTLAAATCVGEF
                     AATLFLSRPEWQTLTTLIYAYLGRAGEDNYARAMVLTLLLSAFALGIFLLLDNGEGGK
                     QTETL"
     gene            3810..4409
                     /locus_tag="ACJJDE_001589"
     CDS             3810..4409
                     /locus_tag="ACJJDE_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-class carbonic anhydrase"
                     /protein_id="HGG7541489.1"
                     /translation="MSELDNILAHNRQFVESGEYEKYFTDKYPERGLAVLSCMDARII
                     GLLPDALGLKNGDAKLIKNAGALVTHPWGSVMRSLLVAVFELKVREIMVIAHHDCGMQ
                     GLNAEEFLGRVRESQIPEDRIETLRYAGIDLDGWLTGFDNVEDSVRHTVDLIRNHPLM
                     PRHIAVHGLVIHPVTGKLTLVVDGSVSDGMDLSEGMETS"
     gene            4406..5011
                     /gene="nadD"
                     /locus_tag="ACJJDE_001590"
     CDS             4406..5011
                     /gene="nadD"
                     /locus_tag="ACJJDE_001590"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HGG7541490.1"
                     /translation="MKKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYH
                     KDAASASAADRLAMVELATAEDARFAVSDCDIVRRGETYTFDTVQIFRQQFPSAQLWW
                     LMGSDSLMKLHTWKKWQMLVRETNIAVAMRQGDSLHQTPRELHAWLGNALQDGSVRIL
                     SAPMHNVSSTEIRRNLAGQGVSDGIPPAAARYIREHGLYEK"
     gene            5070..5456
                     /gene="rsfS"
                     /locus_tag="ACJJDE_001591"
     CDS             5070..5456
                     /gene="rsfS"
                     /locus_tag="ACJJDE_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HGG7541491.1"
                     /translation="MNEQELQDLQKMVGVAVNALEDIKAKDISVLETQDKTSLFARMI
                     IASGDSTRQVKALANNVAVDLKEAGFEILSTEGDSGEWTLVDAGDLVVHVMLPAVRDF
                     YDIDTLWGGEKPSFHAGMQKPWHAAD"
     gene            5510..5980
                     /gene="rlmH"
                     /locus_tag="ACJJDE_001592"
     CDS             5510..5980
                     /gene="rlmH"
                     /locus_tag="ACJJDE_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HGG7541492.1"
                     /translation="MNITVLAVGTKMPRWVDEAVAEYAKRFGRDVAYALKEIKPEKRG
                     AGVNAAQGMAAEEKRILEAVPQGAFLVVLDERGKAPTSVELAEHLKSWRQNGEHVCFV
                     IGGADGMTDRLKQQARMMMRLSSLTLPHGMVRVLLTEQLYRAVSILHNHPYHRE"
     gene            6053..6319
                     /locus_tag="ACJJDE_001593"
     CDS             6053..6319
                     /locus_tag="ACJJDE_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HGG7541493.1"
                     /translation="MARMVFCVKLNKEAEGMKFPPLPNELGKRIFENVSQEAWAAWTR
                     HQTMLINENRLSLADPRAREYLAQQMEQYFFGDGADAVQGYVPQ"
     gene            6476..7159
                     /locus_tag="ACJJDE_001594"
     CDS             6476..7159
                     /locus_tag="ACJJDE_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HGG7541494.1"
                     /translation="MQHDVYDYTAHTVSKNTVLQKTYRLLGFSFIPAAAGAALAANAG
                     FNFYAAFGSRWIGFAVVLAFFYGMIHFIEKNRYSNTGVTLLMVFTFGMGVLIGPVLQY
                     ALHIADGAKIVGIAAAMTAAVFLTMSALARRTRLDMNALGRFLTVGAVILMVAVVANL
                     FLGIPALALTISAGFVLFSSLMIMWQVRTVIDGGEDSHISAALTLFISLYNIFSSLLN
                     ILLSLNGED"
     gene            7283..7795
                     /gene="coaD"
                     /locus_tag="ACJJDE_001595"
     CDS             7283..7795
                     /gene="coaD"
                     /locus_tag="ACJJDE_001595"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HGG7541495.1"
                     /translation="MLPNTPRRAVYAGSFDPPTLGHLWMIRQAQSMFDELIVAIGINP
                     DKRSTYTVAERQDMLCDITKMFPNVRTDVFENRFLVHYAREVDAGFIVRGIRSASDYE
                     YERSMRHINSDLAPEISTVFLMPPREIAEVSSTMVKGLVGPEGWTETIHRYVPQAVYE
                     KILAEHQHEN"
     gene            7827..8480
                     /locus_tag="ACJJDE_001596"
     CDS             7827..8480
                     /locus_tag="ACJJDE_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01621 family pseudouridine synthase"
                     /protein_id="HGG7541496.1"
                     /translation="MLEILFRHQDFVAINKPGGISVHQDSGETGLARTLAIQLGVERV
                     WLLHRLDKQTSGILLFALNRESASALSGQFAGKSIKKTYLALSDRKPSKKQGWIKGGM
                     EKSRRGMWKLTRNTENIAVTRFHSISIAEKLRLFILEPHTGKTHQLRVAMKSLGSPIL
                     GDSLYGGTESETMFLYAWKIQFAYQNRQIEIVAPLKNEWQTENISHALEEFYMAKAG"
BASE COUNT         1851 a         2275 c         2508 g         1929 t
ORIGIN      
        1 caatgtaatc cattctgttc ccgatgttta tgccgtctga aacccatcct gtgtcgggct
       61 tcagacggca tattgcttca aagcaggttt tccgaggcaa cccagttcag aatatcggct
      121 tcgaccgctt cgggcgtgcc ggggttggcg attttgaccc cgtattcgcc ttcgcccagt
      181 tcctcgagga tttccagttg cgaatcgagc atccctgctt tcatataatg tcctttgcgc
      241 gacatcatgc gctcgaggtt gatgtcttgc ggcggactga ggtggatgaa ggcagctttg
      301 ccttcggctc cgcgcagaat gtcgcggtag ccgcgtttga gggcggaaca ggttacgatg
      361 gtgtggttcg caccgttttg cgcctgtttc gtcatccagt cgcgcagatt gcccaaccac
      421 ggatagcggt cttcatcggt cagcggaata cccgcgccca tcttgtcgcg gttggcttgg
      481 gtgtggaact cgtcgccttc ggcataggga cattgaccga ggtgtttctg cagggacagc
      541 gcggcggtgg tcttgccgca gccgcatacg cccataacga caaaatgcgt agtcatttac
      601 tatcctttcc gtctgtcaga cgatggcgaa cagcagtgcg gacaaggcaa agccgatgag
      661 tgcgatgagg gtttggttga ccgtccaggt tttcagcgtg gtcggtacgt ccatgtccaa
      721 gaggcggccg accagccaga agccggagtc gttgaagtgg ctgcaaccga ccgaacctgc
      781 cgccgttgcc aatacgatac aggcgagctg ccagtcggta aagccggcgg cggcaacggc
      841 aggagccatc agcgcggcgg cggtggtcag ggcgacggtt gccgaacctt gcgcgatacg
      901 cagtgccaag gcgacaagga aacagcccaa aaggacggga atgcccaaat ccgccatgct
      961 gtcggcgagt gccttgccga tgccggaagc gcgcaaaacg ccgccgaaca taccgcccgc
     1021 gccggtaatc agaatcacgg aacagacggg ggcgagtgcg ccgtccacgg ttttttccaa
     1081 cgcgctgccg ctttcgccgc gtttgcgtcc caagacaaac agtgcgacca atacggaaat
     1141 cagaagggcg atcggtgtcg aaccgattgt ttttgccgtc tgaacccagg tttcgtccgc
     1201 acttacgagt ttttcgctga tgagggccga tacgccggta ttcaggaaaa tcagcagcat
     1261 gggaatcagc atgatggcga cgaccgttcc tgctttggca ggttctttcg gcaggtcgtt
     1321 gtcttgcgtg ccgccgctga gcagttcggg aacgggaaca tggatggtgc gccccaacac
     1381 tttgccgagc atatagccgc tgaaatacca tgtgatgaag gcggtcggca gacccaaaat
     1441 caaaacttgg ccgatgttcg cgccgtaaaa ttcggaagcg gcaatcgggc ccggatgggg
     1501 cggcaggaag acgtgcatga cggaaaatgc gccgatggag gcaagcgcga agggcagtac
     1561 gtcctgtttc atgcgccgtg cggtggcgaa cacgatgggc agcatgacga ttagtccggc
     1621 atcgaagaaa atcgggaagc cgaaaatcag cgaggcaacg cccagcgcga acggtgcgcg
     1681 tttttcgccg aacatccgga tcagcgcgtc cgccagcgac tgtgcgccgc cggatgtttc
     1741 gaccaaacgt ccgagcatcg cgcccaggcc gaccagaagc gccacgccgc cgagcgtgcc
     1801 gccgaagttt ttgaccagta cgtcgttgac aatgctgcct gtgggcaaac cggttgccaa
     1861 agccgtcagc aggctgacga tgaccagtgt cagcagcgcg tggatgcgga atttgacgat
     1921 taaaatcaga atgaggatga ttgccgccgc cgaaatgccc aacagggttt gcgcggacag
     1981 cgtctgtgtc cagccgtcca tttgtaaagc ctttctctgt aataaaagta caaaattgtc
     2041 aggttttttt aagttgtgcg aaaacgatag cacaaatcgg gcggtaagtt gtttgtctga
     2101 agttatattc ctgtttattt gaacgattta tttcagacgg cgggaggaag gcggatacgg
     2161 tatgtagtcg gattgaaata tacggtatgt ggggcttttg ggtacaatcg caacatcagt
     2221 gtttcaagtg gggaaggcga tggatggacg gcgttgggcg gtatggggtg cttttgccct
     2281 gctgccttcg gcttttttgg cggtaatggt cgttgcgcct ttgtgggcgg tggcggcgta
     2341 tgacggtttg gcgtggcgcg cggtgctgtc ggatgcctat atgctcaaac gtttggcgtg
     2401 gacggtattt caggcagcgg caacctgtgt gctggtgctg cctttgggcg tgcctgtcgc
     2461 gtgggtgctg gcgcggctgg cgtttccggg gcgggctttg gtgctgcgcc tgctgatgct
     2521 gccttttgtg atgcccacgt tggtggcggg cgtgggcgtg ctggctctgt ttggggcgga
     2581 cggcctgttg tggcgcggac ggcaggatac gccgtatctg ttgttgtacg gcaatgtgtt
     2641 tttcaacctt cctgtgttgg tcagggcggc gtatcagggg tttgtgcaag tgcctgcggc
     2701 acggcttcag acggcacgga cgttgggcgc gggggcgtgg cggcggtttt gggacattga
     2761 aatgcccgtt ttgcgcccgt ggcttgccgg cggcgtgtgc cttgtctttc tgtattgttt
     2821 ttccgggttc gggctggcgc tgctgctggg cggcagccgt tatgccacgg tcgaagtgga
     2881 aatttaccag ttggtcatgt tcgaactcga tatggcggtt gcttcggtgc tggtgtggct
     2941 ggtgttgggg gtaacggcgg cggcagggtt gctgtatgcg tggttcggca ggcgcgcggt
     3001 ttcggataag gcggtttccc ctgtgatgcc gtcgccgccg cagtcggtcg gggaatatgt
     3061 gctgctggcg tttgcggcgg aggtgttgtc tgtgtgctgc ctgtttcctt tgttggcaat
     3121 tgttgtgaaa gcgtggtcgg ccggcgaatc gtggcgtgtg ttaatggaaa gtgaaacgtg
     3181 gcaggcggtg tggaatactt tgcgcttctc ggcggcggcg gtgtttgcgg cggcggtttt
     3241 gggtgtggtg tatgcggcgg cggcgcggcg gtcggcgtgg atgcgcgggc tgatgttttt
     3301 gccgtttatg gtgtcgccgg tttgtgtttc ggcgggcgtg ctgctgcttt atccgcagtg
     3361 gacggcttcg ttgccgttgc tgctggcgat gtatgcgctg ctggcgtatc cgtttgtggc
     3421 aaaagatgtt ttgtcggctt gggacgcact gccgccggat tacggcaggg cggcggcggg
     3481 tttgggcgca aacggctttc agacggcatg ccgcatcacg ttccccctct tgaaaccggc
     3541 gttgcggcgc ggtctgactt tggcggcggc aacctgcgtg ggcgaatttg cggcaacctt
     3601 gttcctgtcg cgtcccgagt ggcagacgct gacgactttg atttatgcct atttggggcg
     3661 tgcgggtgag gataattatg cgcgggcaat ggtgttgaca ttgctgttgt cggcgttcgc
     3721 gctgggcatt ttcctgctgt tggacaacgg cgaaggcgga aaacagacgg aaacgttata
     3781 atgtgaaccc tttttcagag gacggcaaaa tgagcgagtt ggataacatc cttgcccata
     3841 accggcagtt tgtcgagtcg ggcgaatatg aaaaatactt taccgacaaa taccccgaac
     3901 gcgggctggc agttttgtcc tgtatggatg cgcggattat cgggctgctg cccgacgcgt
     3961 tgggtttgaa aaacggcgat gccaagctga ttaaaaatgc cggcgcgctg gttacgcacc
     4021 cgtggggttc ggtgatgcgg agtcttttgg ttgccgtgtt tgaattgaag gtcagagaga
     4081 ttatggtcat cgcccatcac gattgcggta tgcaggggct gaatgccgaa gaattcctcg
     4141 ggcgcgtccg ggaaagccag attcccgaag accgtatcga aaccctgcgt tatgccggta
     4201 tcgacctcga cggctggctg accggtttcg acaacgtcga agacagtgtg cgccacacgg
     4261 tggaccttat ccgtaaccat ccgctgatgc cgcgccatat cgccgttcac ggactggtca
     4321 tccatcccgt taccggcaaa ctgacgctgg ttgtggacgg cagtgtttca gacggcatgg
     4381 acttatcgga aggaatggaa acatcatgaa gaaaatcgga ctgttcggcg gcactttcga
     4441 cccgatacac aacgggcatc tccacatcgc ccgcgccttt gccgacgaaa tcggcttgga
     4501 cgcggttgtt ttcctgccga caggcggccc gtatcacaaa gacgccgcct ccgcttccgc
     4561 cgccgaccgc cttgccatgg tcgaattggc gacggcagaa gatgcgcgtt ttgccgtcag
     4621 cgactgcgac atcgtccgcc ggggcgagac ttacactttc gacaccgtcc aaattttccg
     4681 ccagcagttc ccctcggcgc aactctggtg gctgatgggc agcgacagcc tgatgaagct
     4741 gcacacatgg aaaaaatggc agatgctcgt gcgcgaaacc aatatcgccg tcgccatgcg
     4801 gcagggcgac agcctgcacc aaaccccgcg cgaactgcac gcgtggctgg gcaatgcgct
     4861 tcaggacggc agcgtccgca tcttgtccgc cccgatgcat aatgtgtcgt caacggaaat
     4921 ccgccgcaac cttgccggcc aaggcgtttc agacggcatc ccgcctgccg ccgcacgcta
     4981 catccgcgaa cacggtttgt atgaaaaata aagtcaaatc agtaagaaac ggctataatg
     5041 ccgtctgaaa acatcccgtt aggaacataa tgaacgaaca agaactgcaa gacctgcaaa
     5101 aaatggtcgg ggtcgccgtc aacgccctcg aagacatcaa agccaaagac atttccgttc
     5161 tcgaaacgca agataaaact tcgctgtttg ccagaatgat tatcgccagc ggcgacagta
     5221 cgcgccaagt caaagcactg gccaacaacg ttgccgtcga tttgaaagaa gccggttttg
     5281 aaatcctcag taccgaaggc gacagcggcg aatggacgtt ggttgatgca ggagacctcg
     5341 ttgtccacgt tatgctccct gccgtgcgcg acttctacga catcgacacc ctttggggcg
     5401 gcgagaaacc gagtttccac gccggaatgc agaagccgtg gcacgcggca gactgattcc
     5461 cgatgccgtc tgaatgttca gacggcattt tcctgtaagg gagaaagcat tgaacattac
     5521 cgttttggca gtcggcacca aaatgccgcg ctgggttgat gaggccgtcg ccgaatacgc
     5581 caaacgcttc ggacgcgacg tcgcctacgc actcaaagaa atcaaacccg aaaaacgcgg
     5641 cgcgggcgtg aatgccgccc aaggtatggc ggcggaagaa aaacgcatcc ttgaagccgt
     5701 tccgcaaggc gcgttccttg tcgttcttga cgaacgcggc aaagcgccga cctccgtcga
     5761 gctggcggaa cacctcaaaa gctggcggca aaacggcgaa cacgtctgct tcgtcatcgg
     5821 cggcgcggac ggcatgaccg accgcctcaa acaacaagcc cgcatgatga tgcgcctgtc
     5881 cagcctcacc ctgccgcacg gcatggtgcg cgtccttctg accgagcagc tctaccgggc
     5941 cgtttccatc ctgcacaacc atccttatca tcgggaataa gaaggctttt gtccgccccc
     6001 ctaatcggtt aaaatcaccc cgttatttct gaacacagca aaggaatccg ctatggcacg
     6061 catggtattc tgcgtcaagc tcaacaaaga agccgaaggc atgaaatttc cgccgcttcc
     6121 caacgaattg ggcaagcgca tttttgaaaa cgtatcgcaa gaagcgtggg cggcgtggac
     6181 gcgccaccaa accatgctga ttaacgaaaa ccgcttaagc cttgccgatc cgcgcgcgcg
     6241 cgaatacctg gctcagcaga tggagcagta tttcttcggc gacggcgcgg atgccgttca
     6301 gggatacgtt ccgcaataac ggttttccgt tttgaacaca ggctgtccga aactgcttca
     6361 gacggccttt aaaatacgct ggacaacttt atcttcacgc aaccggacaa attttgacat
     6421 tgggcaatgt taaaatcccc cattattccc aaccgcgctt tcaggagcag atgatatgca
     6481 acacgacgtt tacgactaca ccgcgcatac ggtttctaaa aacaccgtcc tgcagaaaac
     6541 ctaccgcctg ctcggatttt cattcattcc ggcagccgca ggcgcggcac ttgccgccaa
     6601 tgccggtttc aatttttacg ccgccttcgg ttcgcgctgg atagggtttg ccgtcgtgtt
     6661 ggcgtttttc tacggtatga tccacttcat cgagaaaaac cgttacagca ataccggcgt
     6721 taccctgctg atggtattca cattcggtat gggcgtattg atcggccccg tgctgcaata
     6781 cgcgctccat attgccgacg gtgcgaaaat cgtcggcatt gccgccgcga tgaccgccgc
     6841 cgtcttttta acgatgtccg ccttggcgcg ccgaacccgg ctcgatatga acgcgctcgg
     6901 acgcttcctg accgtaggtg cggtcattct gatggtcgcc gtggttgcca atctgttttt
     6961 gggtattccc gcactcgccc tgaccatttc cgccggtttt gtcttgttca gttccttaat
     7021 gattatgtgg caggtacgca ccgtcatcga cggcggcgaa gacagccaca tcagcgcggc
     7081 actgacactg tttatctcgc tttacaacat cttcagcagc ctgctgaaca tcctgttgtc
     7141 tttaaacggc gaggattgat gccggcaaaa cgccgtccga ctatgccgtc tgaaaatgct
     7201 tcagacggca ttttactttg ggcatacaat acggatgcac acgcaccaac acacagccga
     7261 ctatgaagcc gggaggaatc aaatgttacc gaatacaccg cgccgcgccg tttatgccgg
     7321 cagtttcgat ccgcccacat tggggcatct gtggatgata cggcaggcgc aatctatgtt
     7381 tgacgaactc atcgtcgcca tcggcattaa ccccgacaaa cgcagcacct ataccgtcgc
     7441 tgaaaggcag gatatgttgt gcgatattac taaaatgttt cccaacgtca gaaccgatgt
     7501 atttgaaaac cgatttctgg tgcattacgc ccgtgaggta gatgcaggat tcatcgtgcg
     7561 cggcatccgt tctgcttcgg attacgaata cgaacgttcc atgcgccata tcaacagcga
     7621 cctcgccccc gaaatatcca ccgtattcct catgccgccg cgcgaaatcg ccgaagtgtc
     7681 gtccactatg gtcaaaggac tggtcgggcc ggaaggctgg acggaaacga tccaccgcta
     7741 cgtgccgcaa gctgtgtacg aaaaaatcct tgccgaacat caacacgaaa attgaaccct
     7801 tctatttttg caaggcatat atggatatgt tggaaatttt gttccgccat caagacttcg
     7861 tcgccatcaa caaaccgggc ggcatatccg tccaccaaga cagcggcgag accggactgg
     7921 cccgaacact cgccatacag ttgggcgtag agcgtgtgtg gctgctgcac cgattggaca
     7981 aacagaccag cggcatttta ctgtttgccc tcaacagaga aagcgcgtcc gcccttagcg
     8041 gacagtttgc cggcaaaagc atcaaaaaaa cctatttggc actatccgac cgcaaaccgt
     8101 ccaaaaagca gggttggatt aaaggcggaa tggaaaaatc cagacgcgga atgtggaagt
     8161 tgacgcgcaa tacagaaaat atcgccgtta cccgattcca cagcatcagt atcgccgaaa
     8221 aactgcggct gttcatcctg gaaccgcata cgggcaaaac gcaccaattg agagtggcga
     8281 tgaaaagttt gggcagtccg attctgggcg acagcttata cggcggaaca gaatccgaaa
     8341 ccatgtttct gtatgcatgg aaaatacaat ttgcctacca aaaccgacaa atcgaaattg
     8401 ttgcaccctt aaaaaacgaa tggcagactg aaaatatctc tcatgcgctg gaagaatttt
     8461 atatggcaaa agcaggttaa taaatataaa ttaatttata aacaatatga taaatatttt
     8521 tataaaaatt tttcaagaaa acggttgact gcaaatctct tca
//
LOCUS       DBBZXU010000083         8473 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.083, whole genome shotgun sequence.
ACCESSION   DBBZXU010000083 DBBZXU010000000
VERSION     DBBZXU010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8473
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.083"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            96..1280
                     /gene="coaBC"
                     /locus_tag="ACJJDE_001597"
     CDS             96..1280
                     /gene="coaBC"
                     /locus_tag="ACJJDE_001597"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015941 - pantothenate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HGG7541497.1"
                     /translation="MGKHILLGVTGSIAAYKSCELVRLLKKQGHSVTVVMSRSATEFV
                     SPLTFQALSGNPVLTDTHGGNGSNGMEHINLTRNADVFLIAPASMNTVAKICNGVADN
                     LLTSLAAARKCPLAIAPAMNVEMWLNPANQRNIAQLVSDGITVYMPGLGEQACGENGM
                     GRMPEPAELLDLLPDLWTPKILRGKKILITAGATFEAIDPVRGITNTSSGKMGVALAR
                     ACRAAGAEVSLIHGQLQTALPFGISDTVQAVSAEDMHRAVHRLIDKQDAFISVAAVSD
                     YKVKNRSTQKFKKDKNAKPLSIELDENPDILASIASLPNPPFCIGFAAETENVMAYAR
                     EKRIKKKIPVIVANDVSIAMGKPTNRITIIGDDEELSFPETSKDEAAMQIVERLAVYL
                     NK"
     gene            complement(1347..3503)
                     /locus_tag="ACJJDE_001598"
     CDS             complement(1347..3503)
                     /locus_tag="ACJJDE_001598"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HGG7541498.1"
                     /translation="MPVPQPTAPYDPLTAEARTLLFHTASYLKPEEQAELEKAVAYAF
                     RAHDGQTRKSGEPYITHPIAVATQLAVWHMDVQGLCAGVMHDVLEDTGVTKGEMAAVF
                     GNTIAEMVDGLSKLEKLKFEDHAEHQAESFRKLILAMTKDVRVIVVKLADRLHNMRTL
                     GSMRPDKRRRIARETLEIYAQIANRIGLNNAYQELQDLSFQNLHPNRYETLKKAMDKS
                     RKNRQDVVGKVLRAFGQRLVGANIEAKIKGREKNLYGIHQKMMAKKLRFAEVMDIYGF
                     RVIVNSIPACYAALGALHTLYQPKPGRFKDYIAIPKSNGYQSLHTTLVGPYGLPIEVQ
                     IRTKEMDAVAEGGIAGHWSYKSYSKMVDQAVLHTNRWLKNILDLQASSANAIEFLEHV
                     KVDLFPNEIYILTPKGKILTLPKGATPVDFAYAVHTDIGHKTVAARINNIMMPLRTKL
                     KTGDSVEIITSEHAKPNPAWLNFAVSGRARSAIRQYIKNLNRHDAVVLGESLLQKALS
                     SLLPKDVLLSDGIKEKYLADLNDKQTSFEEVLYNVGMGHTLPVYVAMHIAELAGEHFG
                     SEVRLSSIKVDGQESGHIHFAECCHPVPGDSIRLLLVKGKGMIIHRDTCPTLLKSDPE
                     QQLDADWENMNGQNYRVGLQVQSEDSHGLLALMAQAISDSGADIESVETPSKSQSGTE
                     GFVEFKFLLKVKNLNQLNQIIQNLHSIPYIRKVIRS"
     gene            complement(3596..3802)
                     /gene="rpoZ"
                     /locus_tag="ACJJDE_001599"
     CDS             complement(3596..3802)
                     /gene="rpoZ"
                     /locus_tag="ACJJDE_001599"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HGG7541499.1"
                     /translation="MARITTEDCTGKISNHFDLTLVAARRARQLENGNTPLVDDARNN
                     KPTVTALREIAAGHIGTELLTRNK"
     gene            complement(3861..4478)
                     /gene="gmk"
                     /locus_tag="ACJJDE_001600"
     CDS             complement(3861..4478)
                     /gene="gmk"
                     /locus_tag="ACJJDE_001600"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002241856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006163 - purine nucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HGG7541500.1"
                     /translation="MSAYRKGNIFIISAASGTGKTTLVSRLLANHNGLRVSVSHTTRP
                     PREGEVNGVHYHFVSKEEFESLIAQEAFLEYADVFGNYYGTSAEGVNALAAAGYDVIL
                     EIDVQGAAQVRNALPEAVGIFILPPSFDVLAARLNGRGTDSREVIQRRLSKARHEIEQ
                     SVLFDFVVVNDDLARAEEDLRHIVNACRLKRSRQLGFIADLLENS"
     gene            4606..5205
                     /locus_tag="ACJJDE_001601"
     CDS             4606..5205
                     /locus_tag="ACJJDE_001601"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003999 - adenine
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0006168 - adenine salvage [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HGG7541501.1"
                     /translation="MALKTSNLEHAMLVHPEAMSVGALADKIRKIENWPQKGILFHDI
                     TPVLQSAEYFRLLVDLLVYRYMDQKIDIVAGLDARGFIIGAALAYHLNVGFVPIRKKG
                     KLPFETVSQSYALEYGEAAVEIHTDAVKPGSRVLLVDDLVATGGTMLAGLELIRKLGG
                     EIVEAAAILEFTDLQGGKNIRASGAPLFTLLQNEGCMKG"
     gene            complement(5251..6039)
                     /locus_tag="ACJJDE_001602"
     CDS             complement(5251..6039)
                     /locus_tag="ACJJDE_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HGG7541502.1"
                     /translation="MNPKIVFFDIDDTLYRKYTDTLRPSVKTAVAALRGKGILTALAT
                     GRSLATIPEKVRDMMAETGMDAVVTINGQFALLHGKTVREVPMDAGLMGRVCAHLDGL
                     GMDYAFVGGEGIAVSALSECVCRALQHIASDFFADKDYFSSKPVYQMLVFAEENEMPP
                     WSDIVEREGLKTVRWHEEAVDLLPAGMSKTDGIRSVVEALGLEMADVMAFGDGLNDVE
                     MLSEVGFGVAMGNGEQAVKEAAKYVCPGVDEDGVLRGLQDLGVI"
     gene            6364..7719
                     /gene="yegQ"
                     /locus_tag="ACJJDE_001603"
     CDS             6364..7719
                     /gene="yegQ"
                     /locus_tag="ACJJDE_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HGG7541503.1"
                     /translation="MKAPELLLPAGGLERMRTAYDYGADAVYAGSPRYSLRARNNEFA
                     KLDVLEQGIKEAHERNKKFFLTVNTLPHNSKLKTFVSDMEPLIAMKPDALIMADPGLI
                     MTVREKWPEMPIHLSVQANTTNYWGVKFWQNIGVERIILSRELSMEEIAEIRQQCPDI
                     ELEVFIHGALCIAYSGRCLLSGYFNHRDPNQGTCTNSCRWDYKVHNATESDAGDAQLL
                     QGFNFEKAQEEANQNFEGINGQKRHPYADKVFLIEESNRPGEMMPIMEDEHGTYIMNS
                     KDLRGIEVVEKLAKIGVDSLKVEGRTKSLYYVARVAQSYRKAIDDAVAGRPFDYSLLS
                     ELEGLANRGYTSGFLERHHTQDYQNYLTGHSTAKQSQYVGHVTEIDKNGWATIEVKNR
                     FAVGDSLEIIHPNGNQTIKLEQMARKGQPVDVAPGNGIQVKIPDMQGKEKALIARVLN
                     P"
     gene            7853..8329
                     /locus_tag="ACJJDE_001604"
     CDS             7853..8329
                     /locus_tag="ACJJDE_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease"
                     /protein_id="HGG7541504.1"
                     /translation="MLAVCQSGSAPKNAHTASAGTPAGESCKVIRDDTAGSGKNIIYR
                     CCNGQAAINAAIADGVLESGIPVSFGGGGVPVANGRNLVTRQAANGVGKSDSEACEHA
                     LINAARKFQQTAGKLGGRGVTGFHSYFDKQPLQGGQYDCQAGSFHVRVVMRANVVR"
BASE COUNT         2130 a         2316 c         2019 g         2008 t
ORIGIN      
        1 ttcagacggc attttgtatc caaaacggta actaatgtat ccgtactttg ttatagaatg
       61 gctgctgttt ttcttcgtaa ttagaaattg tcaaaatggg caaacatatt cttttaggtg
      121 taacgggcag tattgcggcg tataagtctt gcgagttggt gcgactgctg aaaaaacagg
      181 ggcattcggt tacggtggtt atgagccgct cggcaactga atttgtttct ccgctgactt
      241 ttcaggcttt aagcggcaat cctgtcctga ccgacacgca cggcggcaac ggttcaaacg
      301 gtatggaaca tatcaacctg acccggaatg cggatgtttt tctgattgcg ccggcaagta
      361 tgaataccgt ggcaaaaatc tgtaacggcg tggcagataa cctactgacc agtctggcag
      421 ccgcacggaa atgtccgctt gccatcgctc ccgcgatgaa tgtggaaatg tggctcaacc
      481 ctgccaacca acggaatatc gcacaactgg tttcagacgg cattactgtc tatatgccgg
      541 gcttgggcga acaggcttgc ggagaaaatg gcatgggaag gatgccggaa cctgccgaat
      601 tgctggattt gcttccggac ttgtggacac cgaaaatttt aaggggcaag aaaatcttga
      661 ttaccgcagg tgcgacattt gaagccattg accctgtcag gggcatcaca aatacctcca
      721 gcggaaaaat gggggtagct ttggcgcggg cgtgccgtgc cgccggtgcg gaagtcagcc
      781 tgattcacgg acagcttcaa accgcgctgc ctttcggcat atccgatacg gttcaagccg
      841 tcagcgctga agatatgcat cgcgcagtgc atcgtttaat cgacaaacaa gatgctttta
      901 tttctgttgc cgccgtctca gactataagg ttaaaaacag gagtacgcaa aaattcaaaa
      961 aagataaaaa tgccaaacca ttatccatcg aattggatga gaaccccgat attttggctt
     1021 ctattgcctc attgccgaac ccgccgttct gcatcggttt tgccgctgaa acggagaatg
     1081 taatggcata tgcgcgagaa aaacgtatta agaaaaaaat accagtgatc gttgccaatg
     1141 atgtttcaat cgcgatgggc aaaccgacca accggattac cattatcggg gacgacgagg
     1201 aactgtcttt tcccgaaaca agtaaagatg aagcggcaat gcagattgtt gaaaggcttg
     1261 ccgtatattt gaacaaataa gcaattgaac ggataaacca taaagcgggt tgcctgttaa
     1321 tcaaaaggca acccgtttta cctgcttcaa cttctgatga ctttgcggat atatggaata
     1381 ctatgcagat tttgaataat ctgattcaat tgattcagat tcttgacttt caataagaat
     1441 ttgaattcga caaaaccttc cgttcccgac tgggatttag acggtgtttc gaccgactca
     1501 atgtccgcac cggaatcgga aatcgcttgc gccattaatg ccagcaagcc gtggctgtct
     1561 tccgattgga cttgaagccc gacacggtag ttctgcccgt tcatattttc ccagtctgca
     1621 tccagctgct gttcgggatc ggactttaac aacgtcgggc aggtatccct atggataatc
     1681 atgccttttc ccttaaccaa cagcaaacgg atggaatcgc cgggaaccgg atggcagcac
     1741 tctgcaaaat gaatatgccc gctttcctga ccatcaactt taatggaact gagcctgacc
     1801 tcgctgccga aatgctcccc tgccaactcg gcaatgtgca tggcgacata aacaggcagg
     1861 gtatgcccca taccgacgtt gtacagcact tcctcaaatg aagtctgttt gtcgttgaga
     1921 tcggcaaggt atttttcttt aatgccgtct gaaagcagga catctttggg cagcaaactg
     1981 gacagggctt tttgtaagag gctctctccc aaaacgaccg catcgtgccg gttaaggttt
     2041 ttaatatatt ggcgtatggc actgcgcgcc ctgcctgaca cggcgaaatt caaccatgca
     2101 ggattgggtt tggcatgttc ggatgtaata atttcgacgg aatcgccggt tttgagcttc
     2161 gtacgcaacg gcatcatgat attgttgata cgtgcggcaa cggttttgtg cccgatatcg
     2221 gtatgcaccg cataagcaaa atcgacaggc gttgcccctt tgggcaaagt taggattttt
     2281 ccttttggcg taaggatgta gatttcgttc ggaaacaaat cgactttgac gtgttcgaga
     2341 aactcaatgg cattggcact gcttgcctgc aaatctaaga tatttttcag ccaccggttt
     2401 gtgtgaagca ccgcctgatc gaccatctta gaatatgatt tatagctcca atgtccggcg
     2461 attccacctt cggcaacagc atccatttcc ttggtacgta tctgaacttc aatcggcaag
     2521 ccgtaagggc cgaccaaagt cgtatgcaga ctttgatacc cgttgctttt cggaatggcg
     2581 atatagtctt tgaaccgccc gggcttgggc tgatagaggg tgtgcaatgc gccgagtgcg
     2641 gcataacagg ctggaatgct gttgacaatg acgcggaaac cgtaaatatc cataacctcg
     2701 gcaaagcgca gctttttcgc catcattttc tgatggatgc cgtacaggtt tttttccctg
     2761 cctttgattt tggcctctat attcgcgcct accagccgct ggccgaatgc gcgcaagact
     2821 ttgccgacaa cgtcctgccg gttcttccgg ctcttgtcca tcgctttttt taaagtctcg
     2881 tagcggttgg gatgcaggtt ttggaacgat aaatcctgaa gctcttgata tgcgttattc
     2941 aaacctatac ggttggcaat ctgtgcatag atttcaaggg tttcccttgc aatccggcgg
     3001 cgtttgtccg ggcgcatcga accgagcgtc cgcatattgt gcaggcggtc ggcaagtttg
     3061 acgacgatga cgcgcacatc tttggtcatc gccaaaatca gtttgcggaa actctccgcc
     3121 tgatgttccg catgatcttc aaatttgagt ttttcgagtt tggacagccc gtccaccatc
     3181 tcggcaatcg tattgccgaa caccgccgcc atttcccctt ttgtcacgcc cgtatcttcc
     3241 aatacgtcgt gcattacacc tgcacaaaga ccctgtacgt ccatatgcca aaccgcaagc
     3301 tgtgtcgcaa cggcaatcgg atgcgtaatg tatggttcgc cacttttgcg ggtttgcccg
     3361 tcgtgggcgc gaaacgcata ggcgacggct ttttcaagct ccgcctgttc ctcgggcttg
     3421 aggtaggagg ctgtatggaa aagcagggta cgcgcttcgg cggtcagagg gtcgtaaggt
     3481 gcggtgggtt gagggacagg catttcagac ggctttcgga acatatttta tttttcgttt
     3541 caaaccgtcg gactgcacgg cggcagaatg tgccgacgtg cgtttccggc agaatttatt
     3601 tattgcgcgt caacagttcc gtaccgatat gcccggcggc gatttccctt aaggcggtaa
     3661 cggtcggttt gttattgcgg gcatcgtcca caagcggcgt gttgccgttc tcaagctggc
     3721 gggcgcggcg agccgctacc aatgtcaggt caaaatggtt ggaaattttt ccggtacagt
     3781 cttcggtggt aatacgtgcc atattatttg ctttctttca aaaatattta aattgggaaa
     3841 ccgagtattt tcgcggtttt ttaggaattt tccaacaaat ctgcaataaa ccccagttgc
     3901 cgcgaccttt tcagacggca ggcattcaca atatggcgca aatcctcctc cgctcgcgcc
     3961 aagtcgtcat tgaccacgac aaagtcaaac aatacggact gctcgatttc atgccttgcc
     4021 ttcgacagcc tcctttggat aacttcccga ctgtccgtcc cgcgtccgtt cagacgtgca
     4081 gcaagcacat cgaaagacgg cggcaggata aagatgccga cggcttccgg cagcgcgttg
     4141 cgaacctgcg ccgcgccctg aacgtcgatt tccaaaatta cgtcatagcc tgccgccgcc
     4201 aaagcattca cgccctccgc gcttgtgccg taatagttgc cgaacacgtc tgcgtattcc
     4261 aaaaaagctt cctgcgcgat aagcgactca aactcttctt tagaaacaaa atgataatgt
     4321 acgccgttta cttcgccttc acgcggcgga cgcgtcgtgt gcgatacgga aacgcgcaaa
     4381 ccgttatggt ttgccaacag ccgcgacacc agcgtggttt tgcccgtgcc ggaagcggcc
     4441 gaaatgataa agatgttgcc ttttcgataa gcggacatat tttttacctg tatattttcc
     4501 agccgattgt atcacaatgg acacccagtt tcctatttgc cgatgcccat attttgccgc
     4561 tattgttttg attgatttgg caagcggcag gctgacggct acaatatggc gttaaaaaca
     4621 tcaaacttgg aacacgcaat gctggttcat cccgaagcta tgagtgtcgg cgcgcttgcc
     4681 gacaaaatcc gcaaaatcga aaactggccg caaaaaggca tcttattcca cgacatcacg
     4741 cccgtcctgc aaagtgcgga atacttccgc cttttagttg atttattggt ttaccgctat
     4801 atggatcaga aaatcgacat cgttgccggt ttggacgcgc gcggcttcat tatcggcgcg
     4861 gcactcgcct accatctcaa cgtcggtttt gtccccatcc gcaaaaaagg caagctgcct
     4921 tttgaaaccg tatcgcaaag ctacgcgctc gaatacgggg aagctgcggt ggaaatccac
     4981 accgatgccg tcaaacccgg ttcgcgcgtg ctgctggtcg atgatttggt tgccacgggc
     5041 ggcacaatgc ttgccgggct ggaactgatc cgcaaactcg gcggagaaat tgtcgaagcc
     5101 gccgccattt tggaatttac cgaccttcaa ggcggcaaga atatccgtgc aagcggcgcg
     5161 cccttattta ccctgcttca aaacgaaggc tgtatgaagg gctgaaaacc gaccctgccg
     5221 tctgaaaccg gcagggttgt tatgatgcgt tcaaatcacg cccaaatctt gcaagcccct
     5281 caacacgccg tcttcatcaa cgccggggca aacatatttc gccgcctctt tcactgcctg
     5341 ttccccgtta cccattgcca caccgaaccc gacttcagac agcatttcca catcgttcaa
     5401 accgtcgccg aacgccatca cgtccgccat ttccaaaccc aatgcttcaa ccacgcttct
     5461 gatgccgtct gttttcgaca ttcccgcagg cagcagatcg accgcttcct cgtgccagcg
     5521 caccgttttc aagccttccc gttccacaat atccgaccag ggcggcattt cgttttcctc
     5581 cgcaaacacc agcatctgat acaccggttt gcttgaaaaa taatccttat cggcaaaaaa
     5641 atcgctggcg atatgctgca aggcgcggca cacgcattcc gacagcgcgg acacggcgat
     5701 cccctctccg ccgacaaacg cataatccat acccaagcca tccaaatgcg cgcaaaccct
     5761 gcccatcaaa ccggcatcca tcggtacttc gcgcacagtt tttccgtgca gcagcgcaaa
     5821 ctgtccgttt atcgttacca cggcatccat gcccgtttcc gccatcatgt ccctgacctt
     5881 ttcgggaatc gtcgccaaag accgccccgt tgccaacgcc gtcaatatgc ctttgccgcg
     5941 caaagccgcc accgccgttt tcacggaagg acgcaaggta tccgtatatt tgcggtacag
     6001 cgtatcgtca atatcgaaaa acacgatttt aggattcatc acattctctc tcgcattcaa
     6061 actgccgcat tgtatcccaa tcaggcaaat acttgataaa tccttataaa tttcccggca
     6121 aaattgaccg cgaacacgaa aaggcggata atccgcccat cctcaaaccc ttttcagacg
     6181 gcatttgcag caatgccgtc tgaaacattt ttacaaagca cacaaatcat gtttcaacac
     6241 acaggacgac acataaagcg tcgccctatg tgttgccctg attcggaagg ggttacgccc
     6301 ctcccaaata aagtctgatt ctaccgccct aaagggcggg gtttcaaccg aaaaggaaac
     6361 acgatgaaag cacccgaact cttattgccc gccggcggat tggaaagaat gcgcaccgcc
     6421 tacgactacg gcgcagatgc cgtttacgcc ggcagcccgc gttattccct gcgcgcccgc
     6481 aacaacgaat ttgccaaact tgatgtttta gaacaaggca ttaaagaagc gcacgagcgc
     6541 aacaaaaaat tctttttgac cgtcaacacc ctgccgcaca attccaaact caaaaccttt
     6601 gtttccgata tggagccgct gattgcgatg aagcccgacg cgctgattat ggcggatccg
     6661 ggcttgatta tgaccgtgcg cgaaaaatgg ccggaaatgc cgatccacct gtccgtacag
     6721 gcgaacacca ccaactactg gggcgtgaaa ttctggcaga acatcggcgt cgaacgcatt
     6781 attctgtcac gcgaattgag tatggaagaa atcgccgaaa tccgccaaca atgccccgac
     6841 atcgaactcg aagtcttcat ccacggcgca ttgtgcatcg cctactccgg ccgttgccta
     6901 ttgtcgggct atttcaacca ccgcgacccc aaccaaggca cttgcaccaa ctcttgccgt
     6961 tgggattaca aagtccacaa cgctacggaa agcgatgcgg gcgatgccca gcttctgcaa
     7021 ggttttaact ttgaaaaagc ccaagaagaa gccaaccaaa acttcgaagg catcaacggt
     7081 cagaaacgcc atccctacgc cgacaaggtt ttcctgattg aagaatccaa ccgtccgggc
     7141 gagatgatgc cgattatgga agacgaacac ggcacctaca tcatgaactc caaagacctt
     7201 cgtggcattg aagtggttga gaaactcgcc aaaatcggcg tggacagcct caaagtcgaa
     7261 ggccgcacca agtcgctcta ttatgtcgca cgcgtcgccc aatcctaccg caaagcgatt
     7321 gacgatgccg tcgcaggccg tccgtttgat tacagcctgt tgagcgaact cgaaggcctt
     7381 gccaaccgcg gctacaccag cggcttcctc gaacgccacc acactcagga ttatcaaaac
     7441 tacctgaccg gccattccac cgccaaacaa agccaatacg tcggacacgt taccgaaatc
     7501 gacaaaaacg gctgggcgac catcgaagtt aaaaaccgct tcgccgtcgg cgattcactc
     7561 gaaatcatcc acccgaacgg caaccaaacc atcaaattgg aacaaatggc ccgaaaaggc
     7621 cagcctgtcg atgtcgcacc cggcaacggc attcaggtca aaatccccga tatgcagggc
     7681 aaagaaaaag ccctcatcgc acgcgtgttg aacccctgag ccacaatgcc gtctgaaccc
     7741 cgttttcaga cggcattttg ttgaatctta cggtacaatg gcaatgattt cccaccgcaa
     7801 gcaaggatat ccgacatgaa aaaaaatcct catactctcc gccgccgccc tgatgctggc
     7861 agtctgccaa tccggcagcg cacctaaaaa cgcgcacacg gcatccgccg gcacaccggc
     7921 cggagaatca tgcaaagtca tccgggacga caccgcagga agcggcaaaa acatcattta
     7981 ccgttgctgc aacggtcagg cggcaataaa tgcagccatt gcagacggcg tattggaatc
     8041 agggattccc gtcagcttcg gcggcggggg cgtaccggtt gcaaacggca ggaatctggt
     8101 tacacggcaa gcagcaaacg gcgttggcaa atccgactcc gaggcctgcg aacacgccct
     8161 aatcaatgcc gcccgcaaat tccagcagac cgccggcaaa ctcggcgggc gcggcgttac
     8221 cggcttccac agctacttcg acaagcagcc gctgcaaggc ggacaatacg actgtcaggc
     8281 aggctcgttc cacgtccgtg tggtcatgcg cgccaatgtc gtccgttaac atatcggcaa
     8341 tcaaaaaatt aggctgtgtt ttagtaatct gttgatttca attatttgca aaggaaaaga
     8401 caattatttt ttcggttagg aagagaccta tcctattgaa tacatttaag ttaaatacgt
     8461 ctatcaacac tat
//
LOCUS       DBBZXU010000084         8468 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.084, whole genome shotgun sequence.
ACCESSION   DBBZXU010000084 DBBZXU010000000
VERSION     DBBZXU010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.084"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(10..222)
                     /locus_tag="ACJJDE_001605"
     CDS             complement(10..222)
                     /locus_tag="ACJJDE_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HGG7541505.1"
                     /translation="MELGYTPYNLRTLRNRCKLTQAELAQIVGVKHYIQVGRWEAEPD
                     TETRRADMPLEKWRQFLDWIEKTNAV"
     gene            complement(234..515)
                     /locus_tag="ACJJDE_001606"
     CDS             complement(234..515)
                     /locus_tag="ACJJDE_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541506.1"
                     /translation="MNRAALFNRYPEWIIGQDGASRFITHCRYPRLIAKIHRQTDGEC
                     PGGHYRHSENGITLYDFIFFDGKPADEARFAAVLTETCRRAVKKICETK"
     gene            complement(844..1416)
                     /locus_tag="ACJJDE_001607"
     CDS             complement(844..1416)
                     /locus_tag="ACJJDE_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HGG7541507.1"
                     /translation="MGKPGKSSRPSALLSARWQDIDLTARLWHIPAADMKTKHPFTVP
                     LSDWAVEILRELHTQTGDNIHLFPGIRPRRKPAPHPDHISIKFAHNAIRRLGYDGSTP
                     GKSKHTMHGFRHLFTNISLTAGKDTLTTDLALGHISRAALQRAGFSSLHHYLTADSYR
                     LQERRELAEWYSRRHRQAYEAAAQNTCNKT"
     gene            complement(1391..1735)
                     /locus_tag="ACJJDE_001608"
                     /pseudo
     CDS             complement(1391..1735)
                     /locus_tag="ACJJDE_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003701232.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            complement(1728..2603)
                     /locus_tag="ACJJDE_001609"
     CDS             complement(1728..2603)
                     /locus_tag="ACJJDE_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3102 domain-containing protein"
                     /protein_id="HGG7541508.1"
                     /translation="MSNEVEVMDAVSVQNYQVAHSVMVMEQWGNGEVYNEATWIERGR
                     LAVRQTMEGMFELGRALIVLKEHTEHGRFMEIVKGQFGIGHNETARLMSATQRFATPQ
                     MQKAAPKLMDLGKSKLLELLVEEDVTLVGLAEGEEVNGMTFDDVDRMTVRELRVALRE
                     SRENLAAKDEVMKTKTAKIDELTEKLAKKQTVVREPKAEDVGSELAMQLTSLEVGIRS
                     QVSRLKDLFDQLNAHSEAHEISHQAKMVGTLNQIILDCEQLRESYALPTEAPTDNVPE
                     WLGGETGEGDESGND"
     gene            complement(2649..2939)
                     /locus_tag="ACJJDE_001610"
     CDS             complement(2649..2939)
                     /locus_tag="ACJJDE_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7541509.1"
                     /translation="MAESKRVQRLLRVFIALDEHPIIGLSNKDLSVGLGLTPSQVSRD
                     IDDLVASGLVIKLENGNYAYGIKTLQIAERFRRQHERLQSKIAEIGKRVNAD"
     gene            complement(2951..3196)
                     /locus_tag="ACJJDE_001611"
     CDS             complement(2951..3196)
                     /locus_tag="ACJJDE_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7541510.1"
                     /translation="MINHECINQPYGRILKFSRVQAKEMLTADELKENFAQNGQTLAQ
                     WARENGFKPRDVYLVIGGQRKGNYGKGYEIAKKLGLK"
     gene            complement(3189..3413)
                     /locus_tag="ACJJDE_001612"
     CDS             complement(3189..3413)
                     /locus_tag="ACJJDE_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HGG7541511.1"
                     /translation="MEKPLNFKPIPYPQTRESAAGWFKRNGVCKAHWAKYFNLERTTV
                     EHLLRGKLKGNFGKSHEAAVLLGMKEKSDD"
     gene            3574..4056
                     /locus_tag="ACJJDE_001613"
     CDS             3574..4056
                     /locus_tag="ACJJDE_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003702557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7541512.1"
                     /translation="MSFQSVHFFVLSRDDLGCLCFDVEIIGRILPILQGIFMNNSSFF
                     GNRLKEERKKLKMTQAEIAEKCGVSGRMWGDYERGISQPKAELFFQFEKVGIDVQYVM
                     HGRRGETAVMPSETLNAEEQELLALFREAAAADREMILMVARRAEKKAQTALGKVSNG
                     "
     gene            4058..4681
                     /locus_tag="ACJJDE_001614"
     CDS             4058..4681
                     /locus_tag="ACJJDE_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541513.1"
                     /translation="MNQFELCQKEHVNPFALSKQYLLVVTFVKSSSKNFQAALLWARS
                     AKLFENLEIGKETIYCCAFDKTAEQAGMAGVFLNYIENWNGKQIYINGRIHSGSIYDL
                     LGVLDCYQKSQSCPNPKSHCCFVSDDIFLWHGSRPTFEISLDLTGKKKETSSAKKFVM
                     PCINFRHHRIEKETYLGNWNEQIAALAVKQNIDWCPSFDIENFRQYE"
     gene            4674..4868
                     /locus_tag="ACJJDE_001615"
     CDS             4674..4868
                     /locus_tag="ACJJDE_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7541514.1"
                     /translation="MNNYYLYRNCSSDVLWVKRIQRQIDGSLLLISDNSTYPPMPLAL
                     AEHPDIQIIGQVVQVSKDLN"
     gene            4892..5452
                     /locus_tag="ACJJDE_001616"
     CDS             4892..5452
                     /locus_tag="ACJJDE_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541515.1"
                     /translation="MKILALLIAATCALSACGGQAEEQPASAQPQEQAQSELKTMPVS
                     YTDYQSVANKGLADQKTGLTLPEHVVPADNAEGKNLLHDFSDGLTLTVDTDKADKITA
                     VRVVWNTDAMPQKAEKLSKAAAALIAATAPGDRTLLRDTGDQIKMAIDSHNAQKEPTR
                     EWARGGIAYKVTVTNLPSVVLTAKAE"
     gene            5593..6651
                     /locus_tag="ACJJDE_001617"
     CDS             5593..6651
                     /locus_tag="ACJJDE_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541516.1"
                     /translation="MKNKLTLRYFKITRCGYWSGSSKEPNHYEDLLKTLTHLETYVKG
                     KTIEETGISRDDKEPSTFLLDICKKNGLWLLAFWNPAAESSSDEIVSLNMKSKLGQVD
                     SSPVTAGNGKTFGFVSYFLIWPEHNFYSTILSPNATLAGRTEFEEYMLNFLWIDPNFI
                     EKTTYEETSTDGIIHTMERTNFKLPLKINGTPVPRFAGKLAKSPSEKEYVISNYDQVT
                     QVHNQCTVKVTSGQSSSGILKKMLPSFFGSTELFAPLKTIRVNHSVSAAFENKSNLKD
                     WIEDWEKNSFDLDKDDCGFKLKNDDKIYWIRGNVIKCELDVNLHKENGIYPAAKILDI
                     IDQRKDYVLNEFKLSDDS"
     gene            6641..7147
                     /locus_tag="ACJJDE_001618"
     CDS             6641..7147
                     /locus_tag="ACJJDE_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541517.1"
                     /translation="MILRNIFLICSAFMIGVAWYLGANIRFEEQWVLYEALRTTASII
                     FAVVGVWLAIVYPERLKSPFSQTFSSPVYRRGFKQLFSPVISSIFILSIVLLVGLLAP
                     LLKHIEAIIQYIPLCRKISFSLLASLTMWQIYTVLSVLVPLLNILSKNENDCHASNII
                     NKLKGEQN"
     gene            7251..7754
                     /locus_tag="ACJJDE_001619"
     CDS             7251..7754
                     /locus_tag="ACJJDE_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 108 protein"
                     /protein_id="HGG7541518.1"
                     /translation="MSTKFNQFINRVLSHEGGYVSHPKDPGGETNWGITKRTAQANGY
                     NGSMRAMTREQAIGIYRKAFWERYRADQMPEAVAFQFFDACVNHGYGNAVRMLQRAAG
                     VADDGIIGEISLKAINSLPENDLLLRFNAERLVFYTKLSTFTSFGKGWVRRVAQNLIH
                     ASADNTD"
     gene            7866..8198
                     /locus_tag="ACJJDE_001620"
                     /pseudo
     CDS             7866..8198
                     /locus_tag="ACJJDE_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217309.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8195..>8468
                     /locus_tag="ACJJDE_001621"
     CDS             8195..>8468
                     /locus_tag="ACJJDE_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein tyrosine phosphatase"
                     /protein_id="HGG7541519.1"
                     /translation="MIEFVRAKKRLLWAFVLLLVWTCGYRYAADKAEAKQTALIATYR
                     HSSMVAAEQYALQLKKAQDERQRWYDFSQKQGRKPVKKQYPPQTKKA"
BASE COUNT         2122 a         1976 c         2037 g         2333 t
ORIGIN      
        1 ctgaaggttt cagacggcgt ttgttttttc tatccaatcg aggaactgcc gccatttttc
       61 cagcggcata tcggcccgac gggtttcggt atcgggttcg gcttcccagc ggcctacctg
      121 tatgtagtgc ttcaccccga cgatttgcgc caactcggcc tgtgtcagtt tgcagcggtt
      181 gcgaagggtg cgaaggttgt aaggcgtgta gccgagttcc atgtcgttgc ggtttatttt
      241 gtttcgcata tttttttgac tgccctgcgg caggtttcgg taaggacggc ggcaaatcgg
      301 gcttcgtctg ccggtttgcc gtcgaaaaaa ataaaatcgt aaagggtgat gccgttttcg
      361 gaatggcggt aatgcccgcc cgggcattcg ccgtctgtct gcctgtggat tttggcaatc
      421 aggcggggat agcggcaatg ggtaatgaaa cggcttgcgc cgtcttgccc gataatccat
      481 tcggggtagc ggttgaatag tgcggctctg ttcattttgt tcgggttgtt cgggggataa
      541 agcccctcgc ggggcttgtg gtcaggcaaa tttgaatatc agtgccaaca cggcggcgat
      601 ggcggtaacc agcccggtgg ccgccatcat gggataccat cgggattctt gggctatttt
      661 acggattcgg cgttgatttt gtgcgcgtct gcaatgattt tggcgatttc ggcatctact
      721 tttctcagac tggagtgttt catttcttgt tcgattatgt tcatcgtact tcctttcgtt
      781 tttggcggtt gccgccgctt gtcggatggt aggatgtctg ccatgtgtat atattgatac
      841 cttttaggtt ttattgcaag tgttttgggc ggcggcttcg tatgcttggc ggtggcggcg
      901 gctgtaccat tcggcgagtt cgcgccgctc ttggaggcgg tagctgtcgg cggtcaggta
      961 gtggtgcagg cttgagaagc cggcgcgttg gagggcggcg cggctgatgt ggccgagggc
     1021 gaggtctgtt gtgagggtgt cttttccggc ggtcaggctg atgttggtga agaggtggcg
     1081 gaatccgtgc attgtgtgtt tggatttgcc gggggtgctg ccgtcatagc ccagtcgtcg
     1141 gatggcgttg tgggcgaatt tgatgctgat gtggtcggga tggggggcgg gtttgcgccg
     1201 tgggcggatg ccggggaaaa ggtggatgtt gtcgccggtc tgtgtgtgca gctctcggag
     1261 tatttctacc gcccagtccg acagtgggac ggtaaagggg tgtttggtct tcatgtcggc
     1321 ggcggggatg tgccataacc gggcggtgag gtcgatgtct tgccagcggg cggaaagcag
     1381 tgcggaggga cgggatgact tccccggttt ccccatcaat ccgcgccgcc tcgatttttc
     1441 cgttggcgcg cagcatttcc accgcctgcc gcaccgacat caaccgcttg ccgttgcgcc
     1501 tcatcgcctc caccaaaacc gccgaaatca atttggcttc ttccggttta agctccgtct
     1561 tgcccgcatc gctgcgccgt ttgcgcgtcg gcttgacgct gaccgcctcc agcttgcggt
     1621 atagcgtggc aaggctgatg cccaattcct gcgcctgctg cttaagatat gcagagcgtg
     1681 cgccgcgttc cattgcttcc gcctgattct cgactgcctt aagacgctca atcattgccg
     1741 gattcatcgc cttctcccgt ttcaccgccc aaccattccg gcacattgtc tgtcggtgct
     1801 tcagtcggca gggcatagct ttcgcgcagt tgctcgcagt ccaaaataat ttgattgagc
     1861 gtgccgacca tctttgcctg atggctgatc tcgtgtgcct cactgtgcgc attaagttgg
     1921 tcgaacaaat ctttcaaacg gctcacttga ctgcggatac cgacctcaag gcttgttaac
     1981 tgcatcgcca actcactgcc cacgtcttcc gccttcggct ctctgacaac ggtttgcttc
     2041 ttagccagct tctcggtcag ctcatcaatt ttggctgttt tggttttcat cacttcgtct
     2101 ttggcggcga ggttttcacg gctttcgcgc agggcgacgc gcagctcgcg caccgtcatt
     2161 cggtccacat cgtcaaaggt catgccgttg acttcttctc cttcggcaag tcccaccaac
     2221 gtaacgtctt cttcgaccaa gagttccagc agctttgact tgcccaaatc catcagcttc
     2281 ggcgcggctt tctgcatttg cggcgtggcg aaacgttggg tagcagacat caatcgggcg
     2341 gtttcgttat ggccgatacc aaattgacct tttacaattt ccataaatcg cccgtgttct
     2401 gtatgctctt tcagtacaat aagtgcgcgc cccaattcaa acatgccttc catcgtctgc
     2461 cgtaccgcca agcggccgcg ttcgatccaa gtggcttcgt tgtaaacctc gccgttaccc
     2521 cattgctcca tcaccatcac gctgtgcgcg acttggtagt tttgcactga aaccgcatcc
     2581 atcacttcaa cttcattgct catttttcac tctccaaatt tccttacgtc aggaaatttc
     2641 aaaattcgtt aatctgcatt cacccgcttg ccgatttcgg caatcttgct ttgcagccgt
     2701 tcatgctgcc gcctgaaccg ctcggcgatt tgcagggttt tgataccgta ggcgtagttg
     2761 ccgttttcaa gcttgatgac caatcccgat gcaaccaaat catcaatatc cctgctgact
     2821 tgtgatggcg tcagccccag tccgaccgat aaatccttat tgctcagacc gataatcgga
     2881 tgttcgtcaa gcgcgataaa gaccctcaat agccgttgta cccttttact ttctgccatc
     2941 cgcatcctcc ttatttcagt cccagcttct tggcaatttc gtaccccttg ccgtaattgc
     3001 ctttgcgctg tccgccgatc actagataca catcgcgcgg cttaaagccg ttctctcttg
     3061 cccactgcgc cagcgtctgg ccgttttggg caaaattttc tttcaattcg tctgccgtaa
     3121 gcatttcttt ggcctgtacg cgggaaaatt tcagtatccg tccgtacggt tggttaatac
     3181 actcatgatt aatcatcgct tttctccttc atccccagca aaaccgccgc ttcgtggctt
     3241 ttgccaaaat tgcctttcag cttgccgcgc aagaggtgct ccaccgtggt gcgctctaga
     3301 ttgaaatatt tcgcccaatg cgccttgcac accccgttgc gcttaaacca cccggccgcg
     3361 ctctcgcgcg tttgcggata gggaataggc ttgaaattca aaggtttttc catattattt
     3421 atgcctttcg tgtgatataa tgtgtttgtt tttaggtctc tttgcacgat aaacatccgg
     3481 tctgttgtgc agcagcaggg tcttggcttg ttttaaagta aacaagcttt ttctcgtagc
     3541 tgggtgtatg tgatccatca tgagctgtcg cgcatgagct ttcaaagtgt tcattttttc
     3601 gtcctttctc gtgatgattt agggtgtttg tgtttcgatg tggaaattat aggaagaatt
     3661 cttcctattt tgcaaggaat atttatgaat aactcttcct tttttggcaa ccgattgaaa
     3721 gaagaaagaa aaaaattaaa aatgactcaa gctgaaatcg ctgaaaaatg tggggtttca
     3781 ggaagaatgt ggggggatta tgaacgtggc atcagccagc caaaagcgga acttttcttc
     3841 caatttgaaa aggtgggtat agacgttcaa tacgtcatgc acggcagacg cggcgaaaca
     3901 gcggtcatgc cgtctgaaac cctgaacgcc gaagaacaag aactgcttgc cctgttccgc
     3961 gaggcggcag ctgccgaccg tgaaatgatt ctgatggttg cgcgcagggc agagaaaaaa
     4021 gcccaaactg cgcttggtaa agtgagtaat ggataaaatg aatcaattcg aattgtgcca
     4081 aaaagaacat gtcaatccat ttgccttgtc aaagcaatat ctattggttg taacattcgt
     4141 caaatccagc agtaaaaatt ttcaggcagc attactttgg gcaagaagtg ccaaattatt
     4201 tgagaatctt gagattggaa aagaaaccat ctattgctgc gctttcgata aaacagcaga
     4261 acaggctggg atggccgggg tatttttgaa ttatattgaa aattggaatg gcaaacagat
     4321 ttacatcaat ggccgaatcc atagtggcag tatttatgat ttgttagggg ttttagactg
     4381 ctatcaaaaa tcacagtcct gtcccaaccc taaaagccac tgttgctttg tttcagacga
     4441 catttttcta tggcatggat caagaccaac gtttgaaatc agtcttgatc taactggaaa
     4501 gaaaaaagaa acatcctctg caaagaaatt tgtgatgcct tgtattaatt tccgtcacca
     4561 taggattgaa aaagaaacct acttaggaaa ttggaatgaa caaattgccg cattggcagt
     4621 aaaacaaaat atagattggt gtccaagttt tgatattgag aattttagac agtatgaata
     4681 attactatct atataggaat tgcagcagcg atgtgttatg ggtcaaacgt atccaacgcc
     4741 aaatcgacgg cagcctactc ttgatttctg acaattcaac ctatccaccc atgcccttgg
     4801 cactggcgga acaccccgat attcaaatca tcgggcaggt agtgcaggta tcaaaagact
     4861 tgaactagac acaatcaaaa agggaaatag aatgaaaata ctcgctttat taattgccgc
     4921 tacctgtgct ttatctgcgt gtggcggcca agctgaagaa caaccggcat ctgcccaacc
     4981 tcaagagcag gcacaatccg aattaaaaac catgccggta agctataccg actatcaatc
     5041 agtagccaat aaagggcttg ccgaccaaaa aactggtctg acccttccag aacatgttgt
     5101 tcctgccgac aatgcggaag ggaagaatct gctgcatgac ttttcagacg gcctcacatt
     5161 aaccgttgat accgataaag ccgacaaaat tactgctgtc cgagtagtct ggaatacaga
     5221 tgcaatgcct caaaaagcgg aaaaactgtc caaagctgcc gcagccttga ttgcggcaac
     5281 cgccccggga gaccgcacac tgctgcgtga taccggcgac caaatcaaaa tggcaattga
     5341 cagccataat gcgcaaaaag agccaacccg agaatgggcg cgtggtggga ttgcttataa
     5401 agtcactgtt actaatttgc cgagcgtggt tttgacagca aaagctgaat aacctgcatt
     5461 acagccacaa ttaggagcag acggagatga tgtttataga gcctgctgag aataaataac
     5521 tgataaaaaa gctgtctgaa aaggtttcgg atagttagga tagctatcta tttttaatat
     5581 attagagaga atatgaaaaa taaactgact ttacgttatt tcaaaataac tcgttgcggt
     5641 tattggtctg gttcttcaaa agaacctaat cattatgagg acttattaaa aactttaact
     5701 catttagaga catatgttaa aggtaaaact attgaagaga ctggaattag tcgtgatgat
     5761 aaagagccaa gcactttctt gctcgatatc tgcaaaaaaa atggtctgtg gttgcttgct
     5821 ttttggaatc ctgccgcaga aagctcttca gatgaaattg tttctttaaa catgaaaagt
     5881 aaactaggtc aagttgattc tagcccagta acagcaggaa atgggaaaac ttttggcttc
     5941 gttagttatt ttcttatttg gccagaacat aatttttact caacgattct ttctcctaat
     6001 gcaactttag ctggacgaac agagtttgaa gagtacatgc ttaatttctt gtggattgat
     6061 cctaatttta tagaaaagac tacctacgaa gaaacttcaa cagacggaat aattcatacc
     6121 atggagcgaa ctaattttaa attgcctctt aaaattaatg gaactcctgt gccacgtttt
     6181 gcggggaaac tagctaaatc tccttcagaa aaagagtatg tcattagtaa ttatgaccaa
     6241 gtaacccaag tgcataatca atgcacggta aaggttacct ctggacaaag ttcaagtgga
     6301 attttgaaga aaatgttacc aagctttttt ggttcaacag aattgtttgc tccattaaaa
     6361 accattcgtg taaatcattc tgtttctgct gcatttgaaa acaaatcaaa tcttaaggat
     6421 tggattgaag actgggaaaa aaattctttt gatttagata aagatgattg tggctttaag
     6481 ttaaaaaacg atgacaagat ttattggatt cgaggaaatg tcatcaaatg tgaattagac
     6541 gtcaaccttc ataaggaaaa tgggatttat ccagctgcta aaattctaga tataatagac
     6601 caaaggaaag attacgtttt aaacgaattc aaattaagtg atgattctta gaaatatttt
     6661 cctaatatgc tctgcattca tgattggtgt agcctggtat ttaggtgcta atatccgatt
     6721 tgaagagcaa tgggtattgt atgaagcctt gagaacaact gcatcaatta tttttgcagt
     6781 tgttggggtt tggttggcta ttgtctatcc cgaacgatta aaaagccctt ttagtcaaac
     6841 tttctcctct ccggtatatc ggcgtggatt caaacagctt ttttcccctg ttataagttc
     6901 catttttatt ttaagtattg tgttacttgt tggtttgttg gctcctttgc tcaaacatat
     6961 tgaggcaata attcaatata tcccactttg tcggaaaatc tcatttagcc tgttagcaag
     7021 cttgacgatg tggcaaattt atacggtttt atctgtatta gtgcctttgt taaatatttt
     7081 aagtaaaaat gaaaatgact gtcatgcatc caacattatt aacaagctaa agggtgaaca
     7141 gaattagcta tgtgattttt agtgtaaact gcttttaact cgtattaaaa ggccactctt
     7201 ttaatacctc ctaaaatccc tgtacctatc aatagataca gggatttttt atgtccacca
     7261 aattcaacca attcatcaac cgcgttctct cccacgaggg cggttacgtc agccatccca
     7321 aagaccccgg cggcgaaacc aattggggca tcactaagcg caccgcccag gcaaacggct
     7381 acaacggctc catgcgtgcc atgacgcgtg aacaggctat cggcatttac cgaaaggcgt
     7441 tttgggagcg ttaccgcgcc gaccaaatgc cggaagcggt cgcgttccaa ttttttgatg
     7501 cctgcgtcaa ccacggttac ggcaatgccg tccgtatgct gcaacgcgcc gcaggcgtgg
     7561 cggacgatgg aatcatcggc gaaatcagcc tcaaagccat caattccctc cccgaaaacg
     7621 accttttatt gcggttcaac gccgagcgtc tggtctttta taccaagctc agtacgttca
     7681 cctctttcgg caagggctgg gtacgccgtg tggcgcaaaa cctgattcac gcgtctgcag
     7741 ataacactga ttaaagggag ataaaccatg tcaaaaaagt cactcatcgc cctaatgacc
     7801 gcagccatgc agcccgattt cagccacagc gacctaggca ttcgctacgc catgccgact
     7861 cagggatgtt ggacgcaagc ccaccgcaag agcggggtag ccgccgcgaa acgcgcagcc
     7921 aaaaaaaagc gtcacaaata accgcctttt tccgatggct gggcggcttg gtctctaatc
     7981 cggccacagg aaaaatcagc cataccaaac tatgggcaaa cgtcgccgca gccgccatga
     8041 cttggaagtt cgtgcaggcg gcggacgcgc ccgaatggct ctagtgggct tatggcgcat
     8101 tggtcggcgg gtatgcatta atcaaacgcg gcatcgcggc gattccgcag ttggcagaaa
     8161 tcaaaaaatc cgcaaatcag gaaggggggc ggcaatgatt gaatttgtcc gagccaaaaa
     8221 acggctgctt tgggcatttg tgcttttgct tgtgtggacg tgcggttacc gatacgccgc
     8281 cgacaaggcc gaagcgaaac aaaccgccct gattgccacc tatcggcatt cttctatggt
     8341 tgcggcggaa caatacgcct tgcagcttaa aaaagcgcag gacgaaaggc agcggtggta
     8401 cgacttttcc caaaaacaag gaagaaagcc cgtgaaaaaa cagtatccgc cgcaaacgaa
     8461 aaaagccg
//
LOCUS       DBBZXU010000085         8421 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.085, whole genome shotgun sequence.
ACCESSION   DBBZXU010000085 DBBZXU010000000
VERSION     DBBZXU010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.085"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(270..830)
                     /gene="sodC"
                     /locus_tag="ACJJDE_001622"
     CDS             complement(270..830)
                     /gene="sodC"
                     /locus_tag="ACJJDE_001622"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC"
                     /protein_id="HGG7541520.1"
                     /translation="MNMKTLLALAVSAVCSVGVAQAHEHNTIPKGASIEVKVQQLDPV
                     NGNKDVGTVTITESNYGLVFTPDLQGLSEGLHGFHIHENPSCEPKEKEGKLTAGLGAG
                     GHWDPKGAKQHGYPWQDDAHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIH
                     TGGDNHSDHPAPLGGGGPRMACGVIK"
     gene            complement(1247..2287)
                     /gene="mutY"
                     /locus_tag="ACJJDE_001623"
     CDS             complement(1247..2287)
                     /gene="mutY"
                     /locus_tag="ACJJDE_001623"
                     /EC_number="3.2.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HGG7541521.1"
                     /translation="MNTPIPFSERLIRWQKQHGRHHLPWQVKNPYCVWLSEIMLQQTQ
                     VATVLDYYPRFLEKFPTVQTLAAAPQDEVLSLWAGLGYYSRARNLHKAAQQVVRQFGG
                     TFPSERKDLETLCGVGRSTAAAICAFSFNRRETILDGNVKRVLCRVFARDGNPQDKKF
                     ENSLWTLAESLLPSENADMPAYTQGLMDLGATVCKRTKPLCHQCPMADICEAKKQNRT
                     AELPRKKTAAEVPTLPLYWLIIRNRNGAILLEKRPAKGIWGGLYCVPCFESLNGLSDF
                     AAKFSLTMADMDEQTALTHRLTHRLLMITPFEGQMPSESPSDGIWIKPAHLKDYGLPK
                     PLEIYLNGNRLE"
     gene            2450..3491
                     /locus_tag="ACJJDE_001624"
                     /pseudo
     CDS             2450..3491
                     /locus_tag="ACJJDE_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225132.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
     gene            complement(3514..3732)
                     /locus_tag="ACJJDE_001625"
     CDS             complement(3514..3732)
                     /locus_tag="ACJJDE_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541522.1"
                     /translation="MPSEALSSLRRHFAAWRRSRHTRQHHSDILPLKCPSAFRIIKIT
                     FSSFDSSRTAHTTRLKKCRLKRIQTASA"
     gene            complement(3747..4385)
                     /locus_tag="ACJJDE_001626"
     CDS             complement(3747..4385)
                     /locus_tag="ACJJDE_001626"
                     /EC_number="4.1.2.14"
                     /EC_number="4.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016832 - aldehyde-lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016833 - oxo-acid-lyase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HGG7541523.1"
                     /translation="MSKLTPREILTAGAVVPVMAIDDLSTAIDLSHALVEGGIPTLEI
                     TLRTPVGLDAIRLIAKEVPNAIVGAGTVTNPEQLKAVEDAGAVFAISPGLHESLAKAG
                     RNSGIPLIPGVATPGEIQLALEHGIDTLKLFPAEVVGGKAMLKALYGPYADVRFCPTG
                     GISLATAPDYLALPNVLCVGGSWLTPKEAVKNKDWDTITRLAKEAAALKPKA"
     gene            complement(4566..6401)
                     /gene="edd"
                     /locus_tag="ACJJDE_001627"
     CDS             complement(4566..6401)
                     /gene="edd"
                     /locus_tag="ACJJDE_001627"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004456 - phosphogluconate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009255 - Entner-Doudoroff pathway through
                     6-phosphogluconate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HGG7541524.1"
                     /translation="MNTTPIHSKLAEITGRIIERSRPTREKYLAKIRSAKQMGRLERN
                     QLGCSNLAHGYAAMPKSIKIEMLQETVPNLGIITAYNDMVSAHQPFKDFPDQIKDEAQ
                     KNGATAQVAGGTPAMCDGITQGYAGMELSLFSRDVIAMSTAVGLSHQMFDGSLFMGVC
                     DKIVPGLMIGALSFGHIPGIFVPAGPMSSGIGNKEKARTRQLFAEGKVGRNELLKSEM
                     GSYHSPGTCTFYGTANSNQMMMEMMGVHLPAAAFVHPYTDLREALTRYAAGHLARGIK
                     NGTIKPLGEMLTEKSFINALIGLMATGGSTNHTMHLVAMARAAGVILNWDDFDEISSI
                     IPLLIRVYPNGKADVNHFTAAGGLPFVIRELLNAGLLHDDVDTVVGHGMRHYTKEPFL
                     IDGKLEWREAPETSGNDDILRKADNPFSPDGGLRLMKGNIGRGVIKVSAVREGCRIIE
                     APAIVFNDQREVLAAFERGELERDFVCVVRYQGPRANGMPELHKLTPPLGILQDRGFK
                     VALLTDGRMSGASGKVPASIHMTPEALMGGNIAKIRTGDLIRFDSVSGELNVLINETE
                     WNAREVESIDLGANQQGCGRELFANFRSMTSSAETGAMSFGGEFA"
     gene            6917..8362
                     /gene="zwf"
                     /locus_tag="ACJJDE_001628"
     CDS             6917..8362
                     /gene="zwf"
                     /locus_tag="ACJJDE_001628"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004345 - glucose-6-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HGG7541525.1"
                     /translation="MSTQTNFDLVLFGATGDLAMRKLLPCLYQAHVAGLLHPEGRILG
                     VSRSELDTEGFLAKVETSSKIHVKENFSDEAWASFVERFAYLKVDVTQPDDFAALGDL
                     VKARKETDNVVIYLSTAPKFFAQTCENLAKIGLNADNVRVVLEKPLGTDLASSQQINT
                     DVARYFKEGQIYRIDHYLGKESLQNLLALRFANVMFEPLWNNKYIESVQLTIAEQLGV
                     EERGEFYDITGALRDMVQNHLMQMLCMTAMEAPASLDADAVRDEKVKVIKSLKPLTVE
                     SVNENVVRGQYTAAKGMNGYLEEINVPQDSFTETYVAIKAEIENERWKGVPFYLRTGK
                     RMAGKVAEIVLNFKDLNSHIFEGSRTAPNRLVIELQPYESVRLYTQMKTPGAGNKVET
                     VPLATDLGKALEGRRAEAYERLLLDVINGKLALFNRRDELEAAWEYVMPILENWANNT
                     TPPHGYGAHSWGPEAARELLARDGHKWHEEQ"
BASE COUNT         1972 a         2001 c         2321 g         2127 t
ORIGIN      
        1 gtaattagga gcgaaaatag acgaaaacct gtgtttgggt ttcggctgtc gggagggaag
       61 ggaattttgc aaaggtctca aatagtacgg aatcgattca cttggtgctt cagcacctta
      121 gagaatcgtt ctctttgagc taaggcgagg caacgctgta ctggtttaaa tttaattcac
      181 tatactgctg aagtcgtgaa ttaaatgcta aatatctagc aaaaaagtgc ggtcaaaatt
      241 taccgcactt ttcgtttcga acaatcgaat tatttaatca cgccacatgc catacgtggg
      301 ccgccaccgc caagtggagc tggatgatcg gagtgattat caccacccgt gtggatcata
      361 atagagtgac cgcgaacatc atctaaatgt ttaagacgtg gtgctaaaac aggatttgtt
      421 gctgtgccat catgcaatac agttaatgca ggtaaatcac ctaagtgtgc atcatcttgc
      481 catgggtaac catgttgttt tgcaccttta ggatcccagt gaccgcctgc gcctaaacca
      541 gctgtcaatt taccttcttt ttcttttggc tcacagcttg ggttttcatg gatgtggaaa
      601 ccatgtaagc cttcgcttaa tccttgtaaa tcaggggtaa acacaagacc atagttagat
      661 tcagtaatag tcactgtacc cacatctttg ttaccgttta ctggatcaag ttgttgcact
      721 ttcacttcaa tagaagcacc tttaggtatc gtattatgct cgtgtgcttg cgcaacacca
      781 actgaacata ctgcactaac cgctagtgct aataaggttt tcatattcat tgcaatctcc
      841 tttattgcag taaaaactcg cgactatttt agtcaatttt gttttaaaag ccgataaatt
      901 tttacgaaaa ttttacatta attgttattt gcagaaaatt agaacccgtt atcacgtctt
      961 ggataaatgc caaaaccatt gtgattcaga gaattaaaaa gaaaaatttc ggaatcctca
     1021 tccttttctg aaacctgatt gcggtatcca tggctttgtc tttgtcattt aagtttgtgt
     1081 tcatgttttt gaccttcttt gctttttaaa tcctttttaa attgccgact tctaccgttc
     1141 caaatgtccc atttgaacat tatcccgccg cctaaaatac gacccaaatt catcggttgt
     1201 tcttgctgcg atacctgcaa acaacagttc aatgggttta ttttgtttat tctaacctat
     1261 taccgtttaa ataaatttcc aaaggcttgg gcaaaccgta atctttcaaa tgcgccggct
     1321 ttatccaaat gccgtctgaa gggctttcag acggcatttg tccttcaaac ggcgtaatca
     1381 tcagcaaccg gtgcgtcagc cggtgggtca gggcggtttg ttcgtccata tctgccatgg
     1441 tcagggagaa tttggcggca aagtcggaaa gcccgttcaa actttcaaaa cacggcacgc
     1501 aatacagccc gccccaaatg cctttggcgg ggcgtttttc cagcaaaatc gcgccgttcc
     1561 ggttgcggat aatcagccag taaagcggca gggtcggtac ttcggcggcg gtttttttgc
     1621 gcggcagctc ggcggtgcgg ttttgctttt tcgcttcgca gatgtccgcc atcgggcatt
     1681 ggtggcacaa gggtttcgtc cgtttgcaca cggtcgcgcc caaatccatc aaaccttgtg
     1741 tataggcagg catatcggcg ttttcagacg gcagcaggct ttcggcaagt gtccagagcg
     1801 agttttcaaa ttttttgtcc tgcggattgc cgtcgcgggc gaacacgcgg cagagtacgc
     1861 gtttgacgtt gccgtccaaa atggtttcgc ggcggttgaa ggagaaggcg caaatggcgg
     1921 cggcggtgct tctgcctacg ccgcagaggg tttccaagtc tttgcgctcc gacggaaacg
     1981 tgccgccgaa ttgcctgacg acttgttgcg cggctttgtg caggttgcgc gcgcggctgt
     2041 aatagcccaa gcccgcccac aacgacaaca cttcgtcttg cggcgcggcg gcaagcgtct
     2101 gaacggtcgg gaatttttct aagaagcgcg gatagtagtc caacacggtg gcgacttgcg
     2161 tttgctggag catgatttcg gaaagccaga cgcaataagg gtttttgacc tgccaaggga
     2221 ggtggtggcg accgtgttgt ttttgccagc ggatgagccg ttcggagaag gggatgggtg
     2281 tgttcattaa tatcaatcgg tggttttatt tatatttaaa acggtatgtt attgtataac
     2341 attgtgaaaa taattcttat tgacttattt tttgtagggg catataactt atataaagaa
     2401 actttattgc ggtattgaaa ttatttatca acaagcaagg agtatcagca tgaaagcaat
     2461 ggtttatcac ggcgcaaacg acatccgttt tgaagaaaaa ccccgtccgc agattatcga
     2521 tccgaccgat gcggtggtga aaatcgtcaa aaccacgatt tgcggtaccg atttgggtat
     2581 ttggaaaggc aaaaaaaccc gaagtcgccg acggtcgtat tctcggtcat gaaggcatcg
     2641 gtattgtaga agaagtcggc gatgctgtaa aaaacatcaa agtcggcgat aaagtcatta
     2701 tttcatgcgt cagcaaatgc tgtacttgcg acaactgcaa aatccaactt tattcgcatt
     2761 gccgcaacgg cggctggatt ttgggctaca tgattgacgg cacgcaggca gaatacgtcc
     2821 gcacgcctta tgccgacaac agcctcgtgc cgctgcccga caacgtcaac gaagaagtcg
     2881 ccctgttgtt gagcgacgct ttgccgaccg cacacgaaat cggcgtgcaa tacggcgatg
     2941 tcaaacccgg cgacaccgta ttcatcgcag gtgccgctcc tgtcggtatg tccgccttgt
     3001 tgaccgccca actgtatagc cccgccgcca ttatcgtgtg cgatatggac gaaaaccgtt
     3061 tgaaactggc gaaagagttg ggcgcgaccc ataccatcag ccccgcttcc ggcgacgtct
     3121 ccaaacaagt tttcgccatc gtcggcgaag acggcgtaga ttgtgccatc gaagcggtcg
     3181 gtatccctgc aacttggaat atgtgccaag acatcgtgaa acccggcggc catatcgccg
     3241 ttgtcggcgt acacggtcaa tccgttgatt tcaaactgga aaaactgtgg attaaaaagc
     3301 ttgccatcac taccggcctg gtaaacgcca ataccaccga aatgctgatg aaggcaattt
     3361 ccagcagctc cgtcgattac accaaaatgt tgacccaccg tttcaaattc agcgaattgg
     3421 aaaaagccta cgacgtgttc aaacacgccg ccgaaaatca agcgatgaaa gtggttttgg
     3481 aagcggatta atcggcgttg aatcagttgt tttttaagcg gatgccgtct gaatgcgttt
     3541 cagacggcat tttttcagcc gcgtagtatg ggctgtccgg ctgctgtcga atgaactgaa
     3601 cgttattttt attatgcgga aggcggatgg gcattttagg ggcagtatgt cggagtggtg
     3661 ctgccgtgta tgccgactgc gccgccaagc ggcaaaatgc cgtctgagac tggaaagggc
     3721 ttcagacggc atttttacga tgcggttcag gctttgggtt tcaatgccgc cgcttctttg
     3781 gcgagacggg tgatggtgtc ccagtctttg tttttcacgg cttctttcgg cgtcagccat
     3841 gagccgccga cgcacaggac gttgggcagt gccaagtaat cgggcgcggt ggcgaggctg
     3901 atgccgcctg tcgggcagaa gcgaacatcg gcgtaagggc cgtacagggc tttgagcatg
     3961 gctttgccgc caacgacttc ggcagggaag agtttgaggg tgtcgatgcc gtgttccaaa
     4021 gccagttgga tttcgcccgg ggtggcaaca ccgggaatca gggggatgcc gctgttgcgg
     4081 ccggctttgg cgagggattc atgcagcccc gggctgatgg cgaaaaccgc gcctgcgtct
     4141 tcgacggctt taagctgttc gggattggtt accgtacctg cgccgacgat ggcgttgggc
     4201 acttctttgg caatcaggcg gatggcatcg aggccgacag gggtgcgcag ggtgatttcg
     4261 agggtaggga tgccgccttc gacaagggcg tgggacaaat cgatggcggt gcttaagtcg
     4321 tcaatcgcca ttaccggcac aactgcgccg gcggtcaaaa tttcgcgggg ggtcagtttg
     4381 gacatttcgg ttctccgggt ggaatggggt attttattaa gatgggacag gtcgtaggtc
     4441 ggattcaaga aaccgacatc ttggacggct gtgtcggatt cgagaatcca acctacgtct
     4501 atcttaaaac acttgaataa tttttcagac ggccttcggt ctgaaaaggc cgtctgaaac
     4561 gcgcatcagg caaattcgcc gccgaagctc atcgcgccgg tttcggcgct gctggtcatg
     4621 ctgcggaagt tggcgaaaag ttcgcggccg cagccttgtt ggttcgcgcc caagtcgatg
     4681 ctttcgactt cgcgggcatt ccattcggtt tcgttaatca ggacgttgag ttcgccgcta
     4741 acggagtcga agcggatcag gtcgccggta cggattttgg cgatgttgcc gcccatcagg
     4801 gcttcgggcg tcatgtggat ggaggccgga actttgccgg atgcgccgga catacgaccg
     4861 tcggtcagca gtgccacttt gaagccgcgg tcttgcagga tgcccaaagg cggggtcagt
     4921 ttgtgcaatt cgggcatacc gttggcacgc gggccttggt agcggacgac gcacacaaaa
     4981 tcgcgttcca actcgccgcg ttcaaacgca gccaacactt cgcgttggtc gttgaacacg
     5041 atggcaggcg cttcaataat gcggcagcct tcgcgcacgg cggacacttt aatcacgcca
     5101 cgtccgatgt tgcctttcat caggcgcaga ccgccgtcgg gggagaacgg gttgtcagct
     5161 ttacgcagga tgtcgtcgtt gccgctggtt tcgggggctt cgcgccattc gagtttgccg
     5221 tcgatgagga aaggctcttt ggtgtagtgg cgcataccgt gtccgacgac ggtatcgaca
     5281 tcgtcgtgca acaggcctgc attcagcaat tcgcggataa cgaaaggcag tccgcccgct
     5341 gcggtaaagt gattcacgtc ggccttgccg ttcggataaa cgcggatgag tagtgggatg
     5401 atggaggaaa tttcgtcgaa gtcgtcccag ttcaaaatca cgccggccgc acgcgccata
     5461 gcgacgaggt gcatggtgtg gttggtcgaa ccgccggttg ccatcaggcc aatcaaggcg
     5521 ttgataaagg atttttcggt caacatttcg cccaaaggtt taatcgtgcc gtttttgatg
     5581 ccgcgcgcga ggtgtccggc ggcgtagcga gtcagcgctt cgcgcaggtc ggtgtaaggg
     5641 tggacgaagg cggcggcagg caggtgcacg cccatcattt ccatcatcat ttggttggag
     5701 tttgccgtgc cgtagaaagt gcaggtgccc gggctgtggt aagaacccat ttcgcttttc
     5761 aaaagttcgt tgcgtccgac cttgccttcg gcgaaaagct ggcgggtgcg ggctttttct
     5821 ttgttgccga taccgctgga catcgggcct gcggggacga agatacccgg aatatgaccg
     5881 aacgaaagcg cgcctatcat caaacccgga acgattttgt cgcatacgcc cataaacagg
     5941 ctgccgtcaa acatttgatg cgacagcccg acggcggtac tcatggcaat cacgtcgcgg
     6001 gagaacagcg acagttccat gccggcgtag ccttgcgtga tgccgtcgca catggcgggc
     6061 gtgccgccgg cgacttgggc ggtcgcgccg tttttctgcg cttcgtcttt gatttggtca
     6121 gggaagtctt taaacggctg gtgtgcggaa accatgtcgt tgtaggcggt gatgatgcct
     6181 aagttgggga cggtttcctg aagcatttcg attttgatac ttttaggcat ggcagcatag
     6241 ccgtgtgcca agttgctgca gccgagctgg ttgcgctcta agcgtcccat ttgtttggca
     6301 ctgcggatct tcgccagata tttttcacgc gtcggacggc tgcgttcaat aatgcgcccg
     6361 gtgatttcgg cgagtttgga gtggatagga gtagtgttca cggtcggtct cctgtcggaa
     6421 cggggggtat tggggatttg tttgtgcgtt tctgattttt gtatcgggta ttcagacggt
     6481 aagtatagtg gattaacaaa aaccagtacg gcgttgcctc gccttgccgt attatctgta
     6541 ctgtctgcgg cttcgtcgcc ttgtcctgat ttttgttaat ccactatatt ttaaaaggta
     6601 tgccgtctga aagtgggaag cgggtgttat tatagtacaa aatttgtaat tttgttacaa
     6661 aaaaatcaga catcgaaaag aaatttgatt taaatcgcag aatctttcga ttgttgtaac
     6721 ggaatagggg aaacctgccc gatttttgga ctaggtcaaa taaattgtaa aaatgggaat
     6781 agacaaaaag tgtagcggtg tgtagtatta ctactcatta tgccgcctgc ctttgtttcc
     6841 gatattgcga tgcagcgtga tggggaaaac aggtttcaaa cggcatcgaa aaattctttc
     6901 ctgacgagat aatacgatga gtacacaaac aaattttgat ttggtgttgt tcggtgcgac
     6961 cggcgatttg gcgatgcgca agctgttgcc ctgtctgtac caggcgcatg ttgccggtct
     7021 gcttcatccc gaagggcgta ttttgggggt cagccgcagc gagttggata ccgaaggttt
     7081 tctggcgaag gtggaaacca gttccaaaat ccatgtgaaa gaaaattttt ccgatgaggc
     7141 ttgggcatcg tttgtcgaac gtttcgcata tctcaaagtc gatgttacgc agccggacga
     7201 ttttgccgct ttgggcgatt tggtcaaagc gcgcaaagaa accgacaatg tcgtcatcta
     7261 tctttccacc gcgccgaaat tcttcgcgca aacatgtgaa aaccttgcca aaatcggttt
     7321 gaacgccgac aacgtgcgtg tggttttgga aaaaccgttg ggtacggatt tggcttcttc
     7381 ccagcaaatc aataccgatg ttgcgcgtta tttcaaagaa gggcaaattt accgcatcga
     7441 ccactacctt ggcaaagaaa gcctgcaaaa cctgcttgcg ctgcgttttg ccaatgtaat
     7501 gttcgagccg ctgtggaaca ataaatacat cgaaagcgtg cagttgacca tcgccgaaca
     7561 gctcggtgtg gaagagcgcg gcgagtttta cgacattacc ggcgcgttgc gcgatatggt
     7621 gcaaaaccat ttgatgcaga tgctgtgcat gactgcgatg gaagcccccg ccagcttgga
     7681 tgccgacgcg gtgcgcgatg aaaaagtcaa agtcatcaag tcattgaagc cgctgaccgt
     7741 cgaatctgtc aatgaaaatg tcgtgcgcgg acaatatacc gccgccaaag gcatgaacgg
     7801 ctatcttgaa gaaatcaacg ttccgcaaga cagctttacc gaaacctacg tcgccattaa
     7861 agccgaaatc gaaaacgaac gctggaaggg cgttcccttc tacctgcgta ccggcaagcg
     7921 catggcgggc aaagtggcgg aaatcgtttt gaacttcaaa gatttgaaca gccatatttt
     7981 tgaaggcagt cgcaccgcgc ccaaccggct cgttatcgag ttgcaaccat atgaatccgt
     8041 gcgcctctat acgcagatga aaaccccggg ggcaggaaat aaggtcgaaa ccgtgccgct
     8101 ggcaaccgat ttgggcaaag cattggaagg ccgccgcgcg gaagcttacg agcgcctgct
     8161 gctggatgtg attaacggca aactcgcttt gttcaaccgc cgcgacgaac tcgaagccgc
     8221 gtgggaatat gtgatgccga ttttggaaaa ctgggcaaat aacaccacgc cgccgcacgg
     8281 ctacggcgca cactcgtggg ggcctgaagc cgcgcgcgaa ctattggcgc gcgacggaca
     8341 caagtggcac gaagagcagt aatacaataa tgcgttcaga cggcatgggg tttgaaatgc
     8401 cgtctgaacg caagtaaagc a
//
LOCUS       DBBZXU010000086         8276 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.086, whole genome shotgun sequence.
ACCESSION   DBBZXU010000086 DBBZXU010000000
VERSION     DBBZXU010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8276
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.086"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(281..1498)
                     /locus_tag="ACJJDE_001629"
     CDS             complement(281..1498)
                     /locus_tag="ACJJDE_001629"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HGG7541526.1"
                     /translation="MALIVHKYGGTSVGSPERIKNVAKRVAKARAEGHDIVVVVSAMS
                     GETNRLVALAHEMQEHPDPRELDVVLSTGEQVTIGLLAMALKDIGVDAKSYTGWQVAL
                     KTDTAHTKARIESIDDEKMRADLTAGKVVIVAGFQGISSEGDISTLGRGGSDTSAVAL
                     AAALKADECQIYTDVDGVYTTDPRVVPEARRMDTVTFEEMIELASLGSKVLQIRSVEF
                     AGKYKVRLRVLSSLQDGGNGTLITFEEDDNMERAAVTGIAFDKNQARINVRGVPDKPG
                     VAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSERQDSIGAAS
                     IDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMISTSEIKVSVLIDEKYME
                     LATRVLHKAFNLG"
     gene            complement(1700..2428)
                     /gene="rph"
                     /locus_tag="ACJJDE_001630"
     CDS             complement(1700..2428)
                     /gene="rph"
                     /locus_tag="ACJJDE_001630"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0009022 - tRNA nucleotidyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HGG7541527.1"
                     /translation="MPDYIRISRAADSLRDIKITPHFLPHTDGSCLIECGNTKVICTA
                     SIDENVPPFLRGKNQGWVTAEYGMLPASTASRMRREASAGKQSGRTQEIQRLIGRSLR
                     AVVDMEKLGERQILIDCDVIQADGGTRTASITGAFVALQIAVGKLVSDGILSENPIRE
                     AVAAVSVGVVNGVPLLDLDYPEDSGCDSDVNIVMTASGKIIEIQGTAEDAPFSLDELG
                     KLVALAQKGIGELLQHQQNALSAA"
     gene            complement(2510..2974)
                     /locus_tag="ACJJDE_001631"
     CDS             complement(2510..2974)
                     /locus_tag="ACJJDE_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HGG7541528.1"
                     /translation="MYKHLVVAVDGSETSINALKHAAELAGVNGARLTLVHVANPAEY
                     MALAPEFLQHESYEAAAVAQGNEVLDAAERTARELGVENTVKHLLVANKGAREMAQDL
                     VDYADENGADLLVLGTHGRTGLMHLLMGSFAETVMRQSHLPLLIIRSKAEEA"
     gene            3191..3967
                     /locus_tag="ACJJDE_001632"
     CDS             3191..3967
                     /locus_tag="ACJJDE_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HGG7541529.1"
                     /translation="MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWA
                     VEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVF
                     EIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
                     ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREAC
                     SADAAPQGLSCAGYGASMLVTASFGLYCAQAAVEHIADKK"
     gene            4213..5067
                     /locus_tag="ACJJDE_001633"
     CDS             4213..5067
                     /locus_tag="ACJJDE_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ScpA family protein"
                     /protein_id="HGG7541530.1"
                     /translation="MPPIPAPSAPSEHTVAWVFGQPVTDLPQDLFIPPDALKVVLGSF
                     QGPLDLLLYLIRKQNIDVLDIPMVKITEQYLHYIAQIEAYQFDLAAEYLLMAAMLIEI
                     KSRLLLPRTETVEDEEADPRAELVRRLLAYEQMKLAAQGLDALPRAGRDFAWAYLPLE
                     IAVEAKLPEVYITDLTQAWLGILSRAKHTRSHEVIKETISVRAQMTAILRRLNGHGIC
                     RFHDLFNPEQGAAYVVVNFIALLELAKEGLVGIVQEVGFGEIRISLNHEGAHSDGISG
                     TRGGRDVF"
     gene            5108..6316
                     /gene="pncB"
                     /locus_tag="ACJJDE_001634"
     CDS             5108..6316
                     /gene="pncB"
                     /locus_tag="ACJJDE_001634"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004516 - nicotinate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HGG7541531.1"
                     /translation="MTGIIHSLLDTDLYKFTMLQVVLHQFPQTHSLYEFRCRNASTVY
                     PLADIREDLEAELDALCQLRFTHDELDYLRSLRFIKSDFVDYLELFQLQRRFVEIGTD
                     DKDRLNIRIEGPMIQAMFFEIFILAIVNELYFRRLETPAVIEEGERRLQAKAARLKEI
                     AAAQNPDEPPFLISDFGTRRRYKLAWQEHVIRTLLEAAPSIVRGTSNVFLAKKLGITP
                     IGTMAHEFLQAFQALDVRLRNFQKAALESWVHEYRGDLGVALTDVVGMDAFLRDFDLY
                     FAKLFDGLRHDSGDPYVWGDKAYAHYQKLKIDSRTKMLTFSDGLDIERSWALHQYFKD
                     RFKTGFGIGTNLTNDMGHTPLNIVLKLVECNGQSVAKLSDSPGKTMTNNSTFLAYLRQ
                     VFDVPEPETP"
     gene            6408..8126
                     /gene="argS"
                     /locus_tag="ACJJDE_001635"
     CDS             6408..8126
                     /gene="argS"
                     /locus_tag="ACJJDE_001635"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HGG7541532.1"
                     /translation="MNLHQTVEHEAAAAFAAAGIAGSPVVLQPTKNAEHGDFQINGVM
                     GAAKKAKQNPRELAQKVADALAGNAVIESAEVAGPGFINLRLRPEFLAQNIQTALNDA
                     RFGIAKTDKPQTVVIDYSSPNLAKEMHVGHLRSSIIGDSISRVLAFMGNTVVRQNHVG
                     DWGTQFGMLVAYLVEQQKDNAAFELADLEQFYRAAKVRFDEDPAFADTAREYVVKLQG
                     GDETVLALWKQFVDISLSHAQAVYDTLGLKLRPEDVAGESKYNDDLQPVVDDLVQKGL
                     AVEDDGAKVVFLDEFKNKEGEPAAFIVQKQGGGFLYASTDLACLRYRVGTLHADRLLY
                     VVDHRQALHFEQLFTTSRKAGYLPENVGAAFVGFGTMMGKDGKPFKTRSGDTVKLVDL
                     LTEAVERAAALVKEKNPELGADEAAKIGKTVGIGAVKYADLSKNRTSNYVFDWDAMLS
                     FEGNTAPYLQYAYTRVQSVFRKAGEWDATAPTVLSEPLEKQLAAELLKFEDVLQSVAD
                     TAYPHYLAAYLYQIATLFSRFYEACPILKAESASRNSRLQLAKLTGDTLKQGLDLLGI
                     DVLDVM"
     gene            complement(8014..>8276)
                     /locus_tag="ACJJDE_001636"
     CDS             complement(8014..>8276)
                     /locus_tag="ACJJDE_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541533.1"
                     /translation="LLACLLACLLAWRLFVSHFGRGGGYGVSRRFFQIRIRMARLLSA
                     IGRCGFTLRPTHRCPANPSLVSACRRSASPVAGGCCGLRFRL"
BASE COUNT         1924 a         2382 c         2133 g         1837 t
ORIGIN      
        1 gatgtatagt ggattaacaa aaaccagtac ggcgttgcct cgccttagct caaagagaac
       61 gattgtctaa ggtgctgaag caccgagtga atcggttccg tactatttgt actgtctgcg
      121 gcttcgtcgc cttgtcctga tttttgttaa tccactataa atttaatcca ctatattttt
      181 tgttccaaag tcaaaatatg ccgtccgaac attcgggcgg cagacaaaac ggcactgccc
      241 gataaaggca gtgccgttgt ccgtttcaaa ccgtgaaaca tcagcccaaa ttaaaggctt
      301 tatgcaatac cctggttgcc agttccatgt atttttcatc aatcaatacg gaaactttga
      361 tttcggaggt ggaaatcatt tggatgttga taccctcttc ggcgagcgtg cggaagattt
      421 tggcggctac accgacgtgc gaacgcatac ccaaaccgac tgcggagact ttgcatacgg
      481 tgtcgtcgcc atcaatagaa gccgcgccga tactgtcttg gcgttccgac aggatttcca
      541 aagtctgctt gtaatcgccg cgcggtacgg taaaggaaaa atcggttgtg ccttcgctgc
      601 cgacattttg gataatcata tcgacttcaa tgttggcatc ggcaaccgcg cccaaaatct
      661 gataggcaac gccgggtttg tcgggtacgc cgcgcacgtt gatgcgggct tggtttttat
      721 cgaatgcgat accggttacg gcagctcttt ccatgttgtc gtcctcttca aaggtaatta
      781 aggtgccatt gccgccgtct tgcaggctgc tcagtacgcg caggcgcact ttgtactttc
      841 cggcgaattc tactgaacgg atttgcaaga ctttcgagcc gaggcttgcc aattcgatca
      901 tttcttcaaa tgtaaccgta tccatgcggc gcgcttcggg tacgacgcgc ggatcggtgg
      961 tgtacacgcc gtccacgtcg gtatagattt ggcattcgtc cgctttgagg gctgcggcaa
     1021 gcgcaacggc ggaagtgtcg gaaccgccgc gtccgagcgt ggaaatatcg ccttcactgc
     1081 tgatgccttg gaagccggca acgatgacga ctttgccggc ggtaaggtcg gcacgcattt
     1141 tttcgtcatc aatgctttcg atgcgggctt tggtgtgggc ggtatcggtt ttgagggcga
     1201 cctgccagcc tgtgtagctt ttggcatcca cgccgatgtc tttcaatgcc atcgccaaaa
     1261 ggccgatggt tacttgttcg ccggtggaca aaaccacgtc caattcgcgc ggatcgggat
     1321 gctcctgcat ttcgtgcgcc aacgcgacca ggcggttggt ttcaccgctc atggcggata
     1381 cgacgacgac gatgtcgtgt ccttcggcgc gggctttggc gacacgtttg gccacgtttt
     1441 taatgcgttc gggcgagcct acggatgtgc cgccgtattt gtgtacgatt aacgccatgt
     1501 ttcgtgcttt cttgtgtggg attggtcggg cagcatggtt tgctggaaaa gcggctatta
     1561 ttactatttt ttacatgaag ttcaagaacg gactgcgctt tcccgcctgc cgtttgacag
     1621 cggtcagcga aaaacctgtt ctttcagatt gttgacaaaa tgccgtctga acggttttca
     1681 gacggcatcc ggacgacaat caggcggcgg acaacgcatt ttgctggtgt tgcagcagtt
     1741 cgcctatgcc tttttgcgcc agtgcaacca gtttgcccaa ttcgtccaaa ctgaacggcg
     1801 cgtcttccgc cgtaccttgg atttcgatga tttttcccga tgcggtcatg acgatattca
     1861 catcactgtc gcaaccggag tcttcgggat aatccaaatc caaaagcggc acgccgttca
     1921 ctacgcctac tgacacagcg gcaacggctt cgcggatggg gttttcactc aaaatgccgt
     1981 ctgaaaccag tttgccgacg gcgatttgca gcgcgacaaa cgcaccggta atcgaagccg
     2041 tacgcgtacc gccgtctgcc tgaatcacgt cgcagtcaat caagatttgg cgttcgccga
     2101 gtttttccat atccacgacc gcgcgcagcg aacgcccgat aaggcgttgg atttcttgtg
     2161 tgcgcccgga ctgtttgccc gccgaagctt cgcggcgcat ccgggaagca gttgaggcag
     2221 gcagcatccc gtattccgcc gttacccagc cttggttttt accgcgcaga aacggcggga
     2281 cgttttcatc tatggaagcg gtacaaatca ctttggtatt gccgcattca ataaggcacg
     2341 aaccgtccgt atgcggcagg aaatgagggg tgattttgat atcgcgcagg ctgtcggcgg
     2401 cgcgcgagat gcggatgtaa tcaggcatac tgccctcccg ttaaaaacag ataaattaaa
     2461 aagccttaaa tatgaaaaat cacatttaag gccttcaaac tgaaaatttc tacgcctctt
     2521 cggctttgct gcggataatc aaaagcggca ggtggctttg gcgcattacc gtttcggcaa
     2581 aactacccat taaaaggtgc atcagtccgg tacgtccgtg cgtacccaac accagcaggt
     2641 cggcaccgtt ttcatcggca taatcaacca aatcctgcgc catttcacgc gcacccttat
     2701 tggcaaccag caggtgtttg acggtatttt ccacacccag ttcccgggcg gtgcgctcgg
     2761 cggcatccaa aacttcgttg ccttgcgcga cggcggcggc ttcgtagctt tcgtgttgca
     2821 aaaattcggg ggcgagcgcc atatattcgg caggattggc aacgtgtacc aaagtcagac
     2881 gcgcaccgtt gaccccggca agctcggcgg catgtttcag ggcattgatg gacgtttcac
     2941 tgccgtcaac ggcaacaacc aaatgtttgt acatatcgta ttctcctttt gcaccgcctc
     3001 gcggtgccct cttgtcggat gggcgcaggg acagtttgcg ctgtttcatt atagacccgc
     3061 cgtcgggctt tatacaacag ccgaacagcc cgaccgcttt ccagtataat atgccgcttc
     3121 cgtgcagtca ggcatttttt gccggctttc gttcactttt tgatttgacg caatcttgca
     3181 ggattcgacc atgtccgaca acgctttgac ctcttcgcga cgcttcggcg gcatcgccag
     3241 actctacgga gactctgcct tggcgcactt ttcacaggca cacgtctgcg tagtcggcgt
     3301 gggcggtgtc ggctcgtggg cggtcgaggc tttggcgcgg acgggcatcg gacgtttgac
     3361 tttgattgat ttggacaacg ttgccgaatc gaatgtcaac cgccagctgc acgccctgac
     3421 cggagacttc ggcaaagcaa aagttaccgc cttgcgcgaa cgcgtcgccc aaatcaaccc
     3481 agaatgccaa gtgtttgaaa ttgaagattt cgttaccgaa gacaatttgc cggaatactt
     3541 cggaaaaggt tttgatttcg tcatcgacgc gatcgaccaa gtgcgcgtca aagcagcaat
     3601 ggcggcttat tttgtggaac gcaaacaacc gtttgtcctc agcggcggcg cgggcggaca
     3661 aaaaaatccg gcgttaatcc aaaccgccga tttgagccgc gtaacccacg acccgctgct
     3721 tgccaacctg cgctacacct tgcggaaacg ctacggattc agccgcgata cgaaagcaaa
     3781 tatgcgcgtg ccttgcgtgt attcgaccga aaatatcgtg ccgccgcagt ctagggaggc
     3841 ttgttcggca gatgccgctc cgcaaggctt gtcgtgcgcc ggctacggtg caagcatgct
     3901 cgttaccgct tcgttcgggc tatattgcgc acaggcggcg gtggaacaca tcgcagacaa
     3961 aaaataagca atgccgtctg aaaacaggat tcagacggca tttgaacaaa cgcggcaatc
     4021 aagctgtcgg ttcagaaaaa ccaacatcgg cacgcctaaa accgtattca caacctgctc
     4081 cttttcaaaa catttgcatt taaaagccgt tataatgccg tctgaacatt tgcccgacca
     4141 cattatacgt gaatgtcggc agattgtttt cttttgtaaa cttatattaa aatccactta
     4201 ccgattcacg ccatgccgcc catccctgcc ccatccgcac catccgagca cactgtcgca
     4261 tgggtattcg gccaacccgt taccgatttg ccgcaggatt tgtttatccc acccgacgcg
     4321 ctgaaagtcg tattgggcag ttttcaaggc cctttggatc tactgctgta tctgatccgc
     4381 aagcagaaca tcgatgttct cgatattccg atggtgaaga ttaccgagca gtatctgcac
     4441 tacatcgccc aaatagaagc ctatcagttt gatttggcgg cggaatacct gcttatggcg
     4501 gccatgctga ttgaaatcaa atcgcgcctg ctgctgccgc gtaccgaaac cgtcgaagac
     4561 gaagaagccg acccgcgtgc cgagttggtg cgccgcctgc tggcttacga acagatgaag
     4621 ctggcggcgc agggtttgga cgcgctgccc cgagccggac gggatttcgc gtgggcttac
     4681 ctgccgctgg aaattgccgt cgaagccaag ctgcccgaag tctatattac cgacttgacg
     4741 caagcgtggc tgggtatttt gtctcgggca aaacacacgc gcagccacga agtaatcaaa
     4801 gaaaccatct ccgtgcgcgc gcaaatgacg gcaatcctgc gccgtttgaa cggacacggg
     4861 atatgcaggt ttcacgacct gttcaatccc gaacagggcg cggcttacgt ggtcgtcaac
     4921 ttcatcgcac tgttggagct tgccaaagaa ggtttggtcg gaatcgtaca ggaagtcggt
     4981 ttcggagaaa tccgaatcag cctcaatcat gagggggcac attcagacgg catttccggc
     5041 acacggggcg ggcgcgatgt gttctaatac gccccaagcc gccaccaaaa atcgggagac
     5101 acgccatatg accggcatca tacattcgct gcttgacacc gacctctaca aattcactat
     5161 gctgcaagtg gttctgcacc agtttccgca gacgcacagc ctttacgaat tccgctgccg
     5221 caacgcctcg accgtctatc cgcttgccga catcagggaa gacttggaag ccgaactcga
     5281 cgcgctctgc caactacgct tcacccacga cgaactcgac tacctccgta gcctgcgttt
     5341 cattaaaagc gactttgtcg attatctcga actcttccag ctccaacgcc gctttgtcga
     5401 aatcggcaca gacgataaag accgtctgaa catccgcatc gaaggtccga tgatacaggc
     5461 gatgtttttt gaaatcttca tcctcgccat tgtcaacgaa ctttacttcc gccgcctgga
     5521 aacccctgca gtcatagaag aaggcgaacg ccggcttcaa gccaaagccg cgcgcctcaa
     5581 agaaatcgcc gccgcacaaa accccgacga accgcccttc ctgatttccg acttcggcac
     5641 gcgccgccgc tacaagctcg cgtggcagga acacgtcatc cgcaccctgc tcgaagccgc
     5701 cccaagcatc gtgcgcggca ccagcaatgt ctttctcgcc aaaaaactcg gcatcacccc
     5761 catcggcacc atggcgcacg agttcctcca agccttccag gccctcgacg tacgcctgcg
     5821 gaatttccaa aaggccgcgc tcgaaagctg ggtgcacgaa taccggggcg atttgggcgt
     5881 tgccctgacc gacgtggtcg gtatggatgc cttcctgcgc gatttcgacc tctatttcgc
     5941 caaacttttc gacgggctgc gccacgacag cggcgaccct tacgtttggg gcgacaaagc
     6001 ctacgcccac tatcaaaagc tcaaaatcga cagccgcacc aaaatgctga ccttctccga
     6061 cgggctggac atcgaacgct cttgggcatt acaccaatat ttcaaagacc gcttcaaaac
     6121 cggcttcggc atcggcacca acctgaccaa cgatatgggg catacgcctt tgaatatcgt
     6181 cttgaaactg gtcgaatgca acgggcagtc cgtcgccaag ctgtccgact ctccgggcaa
     6241 aaccatgacc aacaacagca ccttcctcgc ctacctgcgc caagtgttcg acgtacccga
     6301 acccgaaacg ccgtaaaccg gcagaaaaag cgcacaattc ctgtttctgc cgcataaaat
     6361 cttttaaaat accgcctgat ttgaatttaa ccgaaagacc gaacttcatg aacctacatc
     6421 aaaccgtcga acacgaagcc gccgccgcct ttgccgccgc aggcatcgcc ggcagccccg
     6481 ttgttttgca gccgaccaaa aatgccgaac acggcgattt ccaaatcaac ggcgtgatgg
     6541 gtgcggcgaa aaaagccaaa caaaacccgc gcgaactggc gcaaaaggtc gccgacgcat
     6601 tggcaggcaa cgccgtcatc gaaagcgcgg aagtcgccgg tcccggtttt atcaacctgc
     6661 gcctgcgccc cgaatttctc gcgcaaaaca ttcagacggc cttgaacgac gcgcgtttcg
     6721 gcatagcgaa aaccgacaaa ccgcaaaccg tcgtcatcga ctattcctcg cccaatctgg
     6781 cgaaggaaat gcatgtcggt cacctgcgtt ccagcatcat cggcgacagc atttcgcgcg
     6841 tgttggcatt tatgggcaac accgtcgtcc gtcaaaacca cgtcggcgac tggggtacgc
     6901 agttcggcat gttggtcgct tatttggtcg agcagcaaaa agacaatgcc gcgtttgagc
     6961 tggcggattt ggagcagttt taccgcgccg ccaaagtgcg ctttgacgaa gatcctgcct
     7021 tcgccgacac cgcgcgcgaa tacgttgtga agctgcaagg cggcgatgaa accgttttgg
     7081 cattgtggaa acagtttgtc gatatttcgc tctcgcacgc ccaagccgtt tacgacacgc
     7141 tgggcttgaa gctgcgcccc gaagacgtgg cgggcgaatc gaagtacaac gacgatttgc
     7201 agccagtggt cgatgatttg gttcaaaaag gtctggcggt cgaagacgac ggcgcgaaag
     7261 tcgtattctt ggacgagttc aaaaacaaag aaggcgaacc cgccgcgttt atcgtgcaaa
     7321 aacaaggcgg cggcttcctt tatgcttcca ccgacttggc gtgtttgcgc taccgtgtcg
     7381 gcacgcttca tgccgaccgc ctgctgtacg tcgtcgacca ccgccaagcc ctgcactttg
     7441 agcaactctt taccacttcc cgcaaagcag gctatctgcc ggaaaacgtc ggcgcggcat
     7501 ttgtcggctt cggcacgatg atgggcaaag acggcaaacc gttcaaaaca cgcagcggcg
     7561 acactgtaaa actggtcgat ctgctgaccg aagccgtcga acgcgccgcc gctttggtga
     7621 aagagaaaaa tcccgaattg ggcgcggacg aagccgccaa aatcggcaaa accgtcggca
     7681 tcggcgcggt caaatacgcc gacttgagca aaaaccgcac cagcaattat gtgttcgact
     7741 gggacgctat gctttcgttt gaaggcaaca ccgcccccta cctgcaatat gcctacaccc
     7801 gcgtgcaaag cgtgttccgc aaagccggtg aatgggacgc aaccgcaccg actgttttga
     7861 gcgaaccgct ggaaaaacag cttgccgccg agctgctgaa attcgaagac gtgctgcaaa
     7921 gcgtggcgga cacggcgtat ccgcactacc tcgccgccta cctctatcaa attgcgaccc
     7981 tgttcagccg cttctacgaa gcctgtccga tactcaaagc cgaaagcgca agccgcaaca
     8041 gccgcctgca actggcgaag ctgaccggcg acacgctgaa acaaggcttg gatttgctgg
     8101 gcatcgatgt gttggacgta atgtaaaacc gcaccgcccg attgcggaca acagcctcgc
     8161 catccttatc cgaatctgaa aaaagcggcg cgatacaccg tatccgccgc ccctcccaaa
     8221 atgcgaaaca aacaaacgcc aagcaagcaa gcaagcaagc aagcaagcaa gcaagc
//
LOCUS       DBBZXU010000087         8171 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.087, whole genome shotgun sequence.
ACCESSION   DBBZXU010000087 DBBZXU010000000
VERSION     DBBZXU010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 8171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8171
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.087"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(65..1312)
                     /gene="fabF"
                     /locus_tag="ACJJDE_001637"
     CDS             complement(65..1312)
                     /gene="fabF"
                     /locus_tag="ACJJDE_001637"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HGG7541534.1"
                     /translation="MSQRRVVITGLGQVSPVGNTVAEAWDTLLTGKSGIGAITRFDAS
                     DINSRVAGEVRGFDIGQYISAKEARRMDVFIHYGIAAALQAIADSGLDDVENLDKDRI
                     GVNIGSGIGGLPGIEVTGKAVIEGGARKINPFFIPGSLINLISGHVTILKGYRGPSYG
                     MVSACTTGAHAIGDSLRMIKYGDADIMVAGGAEGAISTLGVGGFAAMKALSTRNDDPA
                     TASRPWDKGRDGFVIGEGAGILVLEELEHAKKRGAKIYAEIVGFGMSSDAYHITAPNE
                     EGPALAVTRALKDAGINPEDVDYVNAHGTSTPLGDANETKALKRAFGEHAYKTVVSST
                     KSMTGHLLGAAGGVEAVYSILAIHDGKIPPTINIFEQDVEAGCDLDYCANEARDAEID
                     VAISNSFGFGGTNGTLVFKRFKG"
     gene            complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="ACJJDE_001638"
     CDS             complement(1468..1704)
                     /gene="acpP"
                     /locus_tag="ACJJDE_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HGG7541535.1"
                     /translation="MSNIEQQVKKIVAEQLGVNEADVKNESSFQDDLGADSLDTVELV
                     MALEEAFGCEIPDEDAEKITTVQLAIDYINAHNG"
     gene            1936..2943
                     /locus_tag="ACJJDE_001639"
     CDS             1936..2943
                     /locus_tag="ACJJDE_001639"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006222 - UMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HGG7541536.1"
                     /translation="MYPLARRILFALDAEKAHHFTLDALYTVYKLGLIPVTGNRTKPV
                     KLMGMDLPNPVGLAAGLDKNGEYIDALGALGFGFIEIGTVTPKPQPGNPQPRLFRVPE
                     HQGIINRMGFNNHGIDTMIRNIEKSKFSGVLGINIGKNAVTPIENAADDYLICLEKAY
                     AHASYITVNISSPNTKNLRALQGGDELSALLEALKNKQAQLASVYGKYVPLAVKIAPD
                     LDEAQIEDIAHVVKSVEMDGIIATNTTIDKSSLGSHPLAGEQGGLSGRPVHEKSNRVL
                     KLLADHIDGKLPIIGVGGIMEGRDAADKIRLGATAVQVYSGLIYKGPALVKECLKALA
                     R"
     gene            2959..3138
                     /locus_tag="ACJJDE_001640"
     CDS             2959..3138
                     /locus_tag="ACJJDE_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541537.1"
                     /translation="MPSERTFCRSDGIFISFFRLPPLENPLRAALFETKQTPAANRTI
                     LIRSQSKSGGKLLNI"
     gene            3276..3599
                     /locus_tag="ACJJDE_001641"
     CDS             3276..3599
                     /locus_tag="ACJJDE_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541538.1"
                     /translation="MFKDELNEFIRLISDPESELDEWYLSDFKDEHIWEMQSYEAFSC
                     LREAVPYLFAYPRYGYELLEIISALKETSDTTELFYEPGIVPLLIDLYKEDSYLVNMV
                     KRIFK"
     gene            3686..3967
                     /locus_tag="ACJJDE_001642"
     CDS             3686..3967
                     /locus_tag="ACJJDE_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541539.1"
                     /translation="MENGQRNNRFPLEKRIFYLEHSGRYLMICALSDYSQNKHTVVMA
                     NFIYPDEKTDWRNLDDLFNELVLEELQASFMDWHPTVEEAISRHLEDFS"
     gene            4020..4493
                     /locus_tag="ACJJDE_001643"
     CDS             4020..4493
                     /locus_tag="ACJJDE_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2247 family protein"
                     /protein_id="HGG7541540.1"
                     /translation="MNLDLTAQKVRLSWKDILWGYGNKYLGWADVAAYARKMTLSDHD
                     ERVFKLSLINKSNILELKPVLEDLASEMRDYSPKNWLYVLLSDVFHRKEEFEDPLGEV
                     EKIYADFDYPEEIESFVRYMPPKDGYIPSAHTYEENIARLYSHWEHYLNNGGGQG"
     gene            4747..5082
                     /locus_tag="ACJJDE_001644"
     CDS             4747..5082
                     /locus_tag="ACJJDE_001644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541541.1"
                     /translation="MTVDKEQVEKMIYSENKQSVIDGMLGMTFSSEEDEIPWISEKLT
                     ELSKHKDLDIARLSLTCFGHLARMHENIGDCDKVIALLLSKQGDPDFQGFAEDALDEI
                     SLFIFKKRP"
     gene            5262..7952
                     /gene="glnE"
                     /locus_tag="ACJJDE_001645"
     CDS             5262..7952
                     /gene="glnE"
                     /locus_tag="ACJJDE_001645"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HGG7541542.1"
                     /translation="MSDNRLDTARRHSLFLARQLDNGKLKPEIFLPMLDKVLTEADFQ
                     AFADWDKIRAEENEEELARQLRGLRRYVVSQIIVRDINRISDLNEVTRTITLFADFAV
                     NTALDFSYAYYQDMYGTPIGRYTKSPQHLSVVAMGKAGGYELNVSSDIDLIFIYPESG
                     DTDGRRERGNQEFFTKVGQKLIALLNDITADGQVFRVDMRLRPDGDSGALVLSETALE
                     QYLITQGREWERYAWCKGRVVTPYPNDIKSLVRPFVFRKYLDYGAYEAMRKLHRQIHS
                     EVGKKGMADNIKLGAGGIREVEFIAQIFQMIRGGQMRALQLKGTRETLEKLAESGIMP
                     SENVETLLAAYRFLRDVEHRLQYWDDRQTQTLPASPEQRQLLAESMGFDDYADFLNAL
                     NQHRNQVNRLFNEILSEPEEQTQSNSEWQWVWQDKPDEEERQGRLKEHGFDAETIATR
                     LDQIRHSHKYRHLSAHAQPRFDAVVPLFVQAAAAQSNPTDTLMRLLDFLENISRRSAY
                     LAFLNEHPQTLAQLAQIMGQSSWVAAYLNKYPILLDELISAQLLDTAFDWQALAAALS
                     DDLKACGGDTEAQMDTLRHFQHAQVFRLAVQDLAGLWTVESLSDQLSALADTILAAAL
                     LCAWADMPKKHRDTPQFAVVGYGKLGGKELGYASDLDLVYLYDDPHPEAGDVYSRLAR
                     RLTNWLSTATGAGSLYETDLRLRPNGDAGFLAHSIAAFEKYQRENAWTWEHQSLTRAR
                     FICGTPEIQTAFDRIRTEILTAERDQTALADEIIEMREKMFPTHPPADSNVKYARGGV
                     VDVEFIVQYLILAHARKYPQLLDNYGNIALLNIATDCGLIDKTLAEQSRTAYRFYRRQ
                     QHNTKLRDAEKTEVSGELLAHYGNVRKLWREVFGEEAATA"
BASE COUNT         2044 a         2075 c         2153 g         1899 t
ORIGIN      
        1 ctataaaaat gccgtctgaa acggtttcag acggcatttc gatgtcggcg gcggctttgc
       61 ggaatcagcc tttgaagcgt ttgaagacca gcgtgccgtt ggtgccgccg aagccgaagg
      121 agttggaaat ggcaacgtcg atttccgcgt cgcgcgcttc gttggcgcag tagtccaaat
      181 cgcagccggc ttcaacgtct tgttcaaaaa tgttgatggt cggcgggatt ttgccgtcgt
      241 gtatcgccaa aatgctgtac acggcctcca cgccgcccgc cgcgccgagc aggtggccgg
      301 tcatggattt ggtcgagctg acgacggttt tgtaggcgtg ttcgccgaac gcgcgtttga
      361 gggctttggt ttcgttggca tcgcccaagg gggtggacgt gccgtgcgcg ttgacgtaat
      421 ccacgtcttc gggattgatg ccggcatctt tcagcgcgcg ggtaacggca agggcggggc
      481 cttcttcgtt cggcgcggtg atatggtaag catcggaact catgccgaag ccgacgattt
      541 cggcgtagat tttcgcgccg cgttttttgg cgtgttccaa ttcttccaac accaatatgc
      601 ccgcgccttc gccgataacg aagccgtcgc ggcctttgtc ccacggacgg gaagcggtgg
      661 cggggtcgtc gttgcgggtg gagagggctt tcatcgcggc aaaaccgccc acgcccaaag
      721 tgctgattgc gccttccgcg ccgccggcaa ccattatgtc cgcgtcgccg tatttaatca
      781 tacggaggga atcgccgatg gcgtgcgcgc cggtggtgca ggcggaaacc atcccgtagc
      841 tcgggccgcg gtagcctttg aggatggtaa cgtgtccgga aatcagatta atcagagaac
      901 cggggataaa gaaagggttg attttgcgcg cgccgccttc gattacggct ttgccggtga
      961 cctcgatgcc gggcagtccg ccgatgccgg aaccgatgtt cacgccgatg cggtctttgt
     1021 cgaggttttc cacatcgtcc aaacccgaat cggcgattgc ctgcaatgcg gcggcaatgc
     1081 cgtagtggat gaatacgtcc atccggcgcg cttctttcgc gctgatgtat tgtccgatgt
     1141 cgaaaccgcg cacctcgccg gcgacacggc tgttgatgtc ggatgcgtca aagcgggtaa
     1201 tcgcgccgat gccgcttttg ccggtgagca gggtgtccca agcctctgcg acagtgttgc
     1261 cgacagggga aacctgacct aagcctgtaa tgactactct tctctgactc atgataacct
     1321 cgctgttggt tgtcggaatg ggggcatatg cggctgtcgt gcagatgccg tctgtaattt
     1381 gcggcagggg ttcaaacagt ttgccatata agggaaaagc ctctattgcg cggtgcagca
     1441 gaggctgttg tgtcgggcga cgaccggtta gccgttgtgg gcattgatgt agtcgatagc
     1501 cagttggacg gtggtgattt tttcggcatc ttcgtcgggg atttcgcagc cgaatgcttc
     1561 ttccaaagcc ataaccagct ccacggtgtc caaagaatcc gcgcccaagt cgtcttggaa
     1621 agaagattcg tttttcacgt cggcttcgtt tacgcccagt tgttcagcaa caattttttt
     1681 aacttgttgt tcgatgtttg acatatcagt cgttccttta tgccttgcgg caggttgttt
     1741 aagggaaata aatcggtggt attgtaccga cttttaatag agttttctat ctaatgacta
     1801 ttatatcaat atttgccgat ttgtacattt ttgggtgcgg cgggttttgt cgttcaagtt
     1861 tgacctgtgt gccgtatgtt tgacgggatt tcggttaaaa tgacggcatt tccatctgaa
     1921 gcagaaagcc ctgtcatgta tccacttgcc cgccgcatcc tgtttgcact cgatgccgag
     1981 aaagcccacc acttcacgct cgacgcgctc tacacggttt ataaattggg tctgattccc
     2041 gtaaccggca accgtaccaa acctgtaaaa ttgatgggta tggatttgcc caaccctgtc
     2101 ggacttgccg ctggactcga caaaaacggc gaatacatcg acgcattggg cgcgctcggc
     2161 tttggtttca tcgaaatcgg cacggtaacg cccaaaccgc agcccggcaa cccgcagccg
     2221 cgcctcttcc gcgttcccga acaccaaggc atcatcaacc gcatgggttt caacaaccac
     2281 ggtatcgaca ccatgatacg caacatcgaa aaaagtaaat tcagtggcgt attgggcatc
     2341 aacatcggta aaaacgcggt tacacccatc gaaaacgctg ccgatgatta tttaatctgc
     2401 cttgaaaaag cctacgcaca cgcaagttac attaccgtca acatttcctc gcccaacacc
     2461 aaaaacctcc gcgcgctgca aggtggcgac gagttgagcg cattgcttga ggctttgaaa
     2521 aacaaacagg cacagcttgc ctctgtatac gggaaatacg ttccgctcgc cgtcaaaatc
     2581 gcccccgatt tggatgaagc acaaatcgaa gacatcgccc acgttgtcaa atccgtcgaa
     2641 atggacggca tcatcgctac caataccacc atcgacaaat caagtctcgg cagccatccg
     2701 ctcgcaggcg agcagggcgg tttgagcggg cggcccgttc atgaaaaaag taatcgggtg
     2761 ttgaagctgt tggcagacca catagacggc aagctgccga ttatcggcgt aggcggcatt
     2821 atggaaggca gggacgcggc agataaaatc cgcttgggcg caactgccgt ccaggtgtac
     2881 agcggattga tatacaaagg tccggcattg gtcaaagaat gtttgaaggc tttggcgcga
     2941 tgacgcgatc cgcccaaaat gccgtctgaa cgcacgtttt gccgttcaga cggcattttc
     3001 atttcctttt tccgcctgcc gccccttgaa aatcccttac gcgccgccct gtttgaaaca
     3061 aagcaaacgc ccgccgcgaa ccggacaatc ttgatacgca gccaaagcaa gtccggcggt
     3121 aagttgttaa atatataagc aattgataaa aaaaataatt ttatgccgtg gtggacggtt
     3181 tgagaaaacg caaaatatga acggcgttga aattcatgat gtggaaaata aggatacggc
     3241 ggataatcaa aagattttat atttaaggat ttgatatgtt taaggacgaa ctaaatgaat
     3301 ttatccgatt gatatccgat ccggaaagtg aattggatga atggtatttg agtgatttta
     3361 aagatgaaca tatatgggaa atgcaaagtt acgaagcatt ttcatgtttg cgggaagcag
     3421 tcccctattt gtttgcttat ccccgatacg ggtatgaact gttggagata atttccgcgt
     3481 taaaagaaac atctgatacg acagaattat tttatgagcc gggtatcgtg cctttgctga
     3541 ttgatttata taaagaagat agttatctgg taaatatggt caaacggata ttcaaatgat
     3601 gaaaggggcg cgggcgtttg cttggcggaa ggcaggtaac tcaatttgaa ggacgcggaa
     3661 gccgatacgt taaaaaggat gaaaaatgga aaacgggcaa cggaataacc ggtttccttt
     3721 ggaaaaacga attttttatc tggagcattc ggggcggtat ctgatgattt gcgccttatc
     3781 ggattattcc caaaacaaac atactgtcgt tatggcaaat ttcatctatc cggatgaaaa
     3841 aacggattgg cggaatttgg atgatttatt caatgagttg gttttagagg aattgcaggc
     3901 ttcatttatg gattggcatc cgactgttga agaggcaatc agccgtcatt tggaagactt
     3961 ttcgtaacag gcgtcaatcg gaaggggcgg aatgacgggg caggcaatcg gagtaaaaaa
     4021 tgaaccttga tttaaccgcg caaaaagtcc gtctttcttg gaaggatatt ctgtgggggt
     4081 atgggaataa atacttgggt tgggctgatg tggcagctta tgcccgaaaa atgacgcttt
     4141 cagatcatga tgaacgtgtg ttcaaactat ctttaatcaa caaatccaat attcttgaat
     4201 taaagcctgt tctggaagat ttggcttcgg aaatgaggga ttattcccct aaaaattggc
     4261 tgtacgtcct cttaagcgat gtattccata gaaaagaaga atttgaggat cctttggggg
     4321 aagttgaaaa aatttatgca gattttgatt atccggaaga aatagaatca tttgtcaggt
     4381 atatgccgcc caaagacggt tatattcctt ctgcccacac ctatgaagaa aatattgccc
     4441 ggttatattc tcactgggaa cactatttga acaacggcgg agggcagggt taaaaccggc
     4501 aatccgatgc cgtctgaagc attatccggc cttcagacgg caaacggatt agagcggaag
     4561 atttgaaagc gggggcgggc tgcattccgg aagcggcaaa acccgaaccg cccgcatcgt
     4621 tgccgataaa ccgataagga aatcgttttg ccggaccggg tgcaaatgtt tgataacaat
     4681 cctgccgccc ggcaaaaatg ctttaaagaa agcaggattg gttaatttaa aaggaaaaat
     4741 taaaaaatga cggttgataa ggaacaagta gaaaagatga tttattctga aaataaacag
     4801 agtgttattg acggtatgct cggtatgacc ttcagctcgg aggaggatga aatcccctgg
     4861 atttccgaga agttgacgga gttgtcgaaa cataaagact tggatattgc cagattgtca
     4921 ttaacctgtt tcggacatct cgccaggatg catgaaaata tcggcgattg cgataaagtg
     4981 attgctttat tgctctcaaa acaaggtgat ccggattttc aaggttttgc cgaagatgcg
     5041 ttagacgaga tttctttatt tatatttaaa aagcgtccgt aagcgcggat taaacctgtc
     5101 aatccgatgc cgtctgaagc gttatccggc tttcagacgg catcgaaggt tgctatgata
     5161 tagtggcttg actttaaacc ggtacggcat cccctcgccc tgtcctgatt tgaagtgaat
     5221 ccgccatcat cttcctgcca ttttttcaaa cggaatccga aatgtccgac aaccgcctcg
     5281 acaccgcccg ccgccattcc ctcttcctcg cccgccagct cgacaacggc aaactcaagc
     5341 ccgaaatttt cctgccgatg ttggacaagg tgttgaccga agcggatttc caagcctttg
     5401 ccgactggga caaaatccgt gcggaagaaa acgaggaaga attggcgcgg cagttgcgcg
     5461 ggttgcgccg ttatgtggtg tcgcagatta tcgtgcgcga tatcaaccgc atcagcgatt
     5521 tgaacgaagt aacccgcacg attacgctgt ttgccgattt tgctgtgaat accgcattgg
     5581 atttttcata cgcctattat caggatatgt acggcacgcc gatcgggcgt tataccaaat
     5641 cgccgcagca tttgagcgtg gtggcgatgg gcaaggcggg cggctatgag ttgaacgtgt
     5701 cttccgacat cgatttaatt tttatctacc ccgaatcggg cgataccgac ggtaggcgcg
     5761 aacgcggcaa tcaggaattt ttcaccaaag tcgggcagaa actgattgcg ttgctgaatg
     5821 acattaccgc cgacgggcag gtgttccgcg tcgatatgcg gctgcggccg gacggcgatt
     5881 cgggcgcgct ggtattgagc gaaaccgcgc tggagcaata tttgattacg caggggcgcg
     5941 aatgggaacg ctacgcgtgg tgcaaaggcc gcgtggtcac gccgtatccg aacgacatca
     6001 aatcgctggt gcgccccttc gtgttccgca aatatctgga ttacggcgcg tatgaggcga
     6061 tgcgtaagct gcaccgccaa atccacagcg aagtcggcaa aaaagggatg gcggacaaca
     6121 tcaaactcgg cgcgggcggc atccgcgaag tcgaatttat cgcccagatt ttccagatga
     6181 tacgcggcgg gcaaatgcgc gcgctgcaac tgaaaggcac gcgggaaacg ctggaaaaac
     6241 tcgccgaatc gggcattatg ccgtctgaaa acgtcgaaac cctgcttgcc gcctaccgct
     6301 ttttgcgcga tgtcgaacat cgtttgcaat attgggacga ccggcaaacc caaaccctgc
     6361 cggcttcgcc cgaacagcgg caactgcttg ccgaaagtat gggatttgat gattacgccg
     6421 attttttgaa tgctttaaat caacatcgga accaagtcaa tcggttgttc aacgaaattc
     6481 tgagcgaacc cgaagaacaa acgcaaagca acagcgaatg gcaatgggtt tggcaggaca
     6541 agcccgacga agaagaacgg caaggccgtc tgaaagaaca cgggtttgat gccgaaacca
     6601 ttgccacgcg gctcgaccaa atccgccaca gccataaata ccgccacctc tccgcacacg
     6661 cccagccgcg tttcgatgcg gttgtgccgc tgttcgtaca ggcggcggca gcgcaaagca
     6721 acccgaccga tacattgatg cggctgttgg attttctcga aaacatcagc cgccgatccg
     6781 cctatctcgc cttcctcaac gaacatccgc aaaccttggc gcaactggcg cagattatgg
     6841 gccaaagttc ttgggtggcg gcgtatctga acaaatatcc gattttgttg gacgaactca
     6901 tcagcgcgca gcttttggat accgcgtttg attggcaggc gctcgccgcc gccctttcag
     6961 acgacctcaa agcctgcggc ggcgatactg aagcgcaaat ggacaccctg cgccatttcc
     7021 aacacgccca agtcttccgc ctcgccgttc aagacctcgc cggactgtgg acggtagaat
     7081 ccctctccga ccagctctcc gcccttgccg acaccatcct cgccgccgcc ctgctgtgcg
     7141 cgtgggcgga catgcccaaa aaacaccgcg acaccccgca atttgccgtc gtcggctacg
     7201 gcaagctcgg cggcaaagaa ctcggctacg cctccgacct cgacttggtc tatctttacg
     7261 acgatcccca tcccgaagca ggcgacgtgt acagccgcct cgcccgccgc ctgaccaact
     7321 ggctttccac cgccaccggc gcaggcagcc tctacgaaac cgacctgcgc ctgcgcccca
     7381 acggcgacgc aggtttcctc gcgcacagca tcgccgcctt tgaaaaatac cagcgcgaaa
     7441 acgcgtggac gtgggaacac cagtccctta cccgcgcccg cttcatctgc ggcacacccg
     7501 aaattcagac ggcattcgac cgcatccgca ccgaaatcct taccgccgaa cgcgaccaaa
     7561 ccgccttggc agacgaaatc atcgaaatgc gcgaaaaaat gttccccact catcccccag
     7621 ccgacagcaa cgtcaaatac gcacgcggcg gcgtggttga tgtcgaattt atcgtccaat
     7681 atctgatact tgcccacgcc cgaaaatatc cgcaactctt ggacaactac ggcaacatcg
     7741 ccctcttgaa catcgccacc gactgtggcc tcatcgacaa aacccttgca gaacaaagcc
     7801 gcaccgccta ccgcttctac cgccggcagc aacacaatac caaactgcgc gacgcagaaa
     7861 aaaccgaagt aagcggcgaa ttgctggcac attacggcaa tgtcaggaaa ttgtggcggg
     7921 aagtgttcgg cgaagaagcg gcaaccgcct gaataaaaaa tgccgtctga agcctgacaa
     7981 tctgggtttc agacggtatt ttcgtaccgt gccgttttaa ggttgcggca gagctaaagc
     8041 gatttatcgg gaatggctga aacccaaaaa ccggattcct ctttcgcggg aatgacggga
     8101 tttcaggctt ctgtttttgt gggaatgatg ggatttttta tccaagcaaa aatcaaaaca
     8161 aacaaataag a
//
LOCUS       DBBZXU010000088         7952 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.088, whole genome shotgun sequence.
ACCESSION   DBBZXU010000088 DBBZXU010000000
VERSION     DBBZXU010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7952
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.088"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            33..1148
                     /gene="asd"
                     /locus_tag="ACJJDE_001646"
     CDS             33..1148
                     /gene="asd"
                     /locus_tag="ACJJDE_001646"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HGG7541543.1"
                     /translation="MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAA
                     PDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQALRDSGWNGYWVDAASSLR
                     MKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMT
                     YQAASGAGAKNMRELISGMGAVHAQVADELADPAGSILDIDRKVSDFLRSEDYPKANF
                     GVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRVGAMRCHS
                     QAITLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIRELTPAKVTGTLSVPVGRIR
                     KLGMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL"
     gene            complement(1377..1907)
                     /locus_tag="ACJJDE_001647"
     CDS             complement(1377..1907)
                     /locus_tag="ACJJDE_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HGG7541544.1"
                     /translation="MQGFELEDLTLWLIRDAGEDQMWIDRWAVSYPVVQMSEASAGQS
                     IGEWQAGLQTAFERIQGRHIAVVAHGAGAAAFLAWLYRADILTRKKIANIILVPQHPD
                     IFSDDAEHTFQRVRCPCRAALVVSEHGDVPRDWAQKQADTWNARLLVSPHSGSLNGML
                     GGWQWGMKLMQEMLLA"
     gene            complement(1918..2262)
                     /locus_tag="ACJJDE_001648"
     CDS             complement(1918..2262)
                     /locus_tag="ACJJDE_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541545.1"
                     /translation="MLPNKVLGKYDWNVDGKTGIGAAWVVAAFVLPMSVWAIFMLARM
                     QGWLAPTKANPIWALVWLLICLPCLLIASKCLGWKGWRRVVNIFVCLTVCAILSVPAS
                     LLIAFTLRDLLK"
     gene            complement(2249..3028)
                     /locus_tag="ACJJDE_001649"
     CDS             complement(2249..3028)
                     /locus_tag="ACJJDE_001649"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7541546.1"
                     /translation="MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADL
                     SADMKNPHGMHGYWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR
                     LSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLK
                     NWKGNQKNSGFLPEEREWIGKVIHTLGWTDMWRTLYPDNPGYTWWSNRGQAYAKDVGW
                     RIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVEYDYAAE"
     gene            complement(3199..4620)
                     /gene="cysS"
                     /locus_tag="ACJJDE_001650"
     CDS             complement(3199..4620)
                     /gene="cysS"
                     /locus_tag="ACJJDE_001650"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HGG7541547.1"
                     /translation="MTTIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVM
                     VVFDMIARWLRECGYPLTYVRNITDIDDKIIARAAENGETIGELTARFIQAMHEDADA
                     LGVLRPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSL
                     DDLRAGERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFG
                     DTFDIHGGGADLQFPHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFI
                     RVDGEKMSKSLGNFFTIREVLKQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTR
                     LYTTLKNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQL
                     AGCLKALGGIIGLLQRDPIEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRI
                     RDLLNEHKIILEDNAGGTTWRRG"
     gene            complement(5308..6357)
                     /locus_tag="ACJJDE_001651"
     CDS             complement(5308..6357)
                     /locus_tag="ACJJDE_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HGG7541548.1"
                     /translation="MSSNQYIQSLELTNFTVLPNDTFEFSENLNVIVAENGCGKTHLL
                     KILYSLLEVTSNTKNRLLKTELQKSFADKLLNVFRPDSLGRLSKRLQGRGRTEIVLKL
                     QNGTTHSSLNFSSNSSSQVNVQSIGLKENEYTPTPIFLPSRELITLCPWFTSLYQNQS
                     IPFEETWFDTCMQLNHPLAKGPRETKIRELLEPIENAMGGKVSEEQGRFYLSLTNTGG
                     KIEAPLVAEGLRKFVMIARLIATGALLDKGYLFWDEPEANLNPKLIKVAARIIWSLSQ
                     QGIQVFIATHSLFLLRELELLKLENNTDLPVRFFSLIASDDGTKVEQGNSINDLNTLI
                     LLDENIMQADRYLNI"
     gene            complement(6440..7594)
                     /gene="obgE"
                     /locus_tag="ACJJDE_001652"
     CDS             complement(6440..7594)
                     /gene="obgE"
                     /locus_tag="ACJJDE_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HGG7541549.1"
                     /translation="MKFIDEAKIEVAAGKGGNGATSFRREKFVPRGGPDGGDGGKGGS
                     VWAEADENTNTLVEYRFVKRYQAKNGEKGHGSDRYGAGADDIVLKMPIGTLIRDLDTD
                     EIVADLTYHGQRVCLAKGGKGGLGNIHFKSSVNRAPKQSTPGEEGETRSLQLELKVLA
                     DVGLLGMPNAGKSTLITAVSAARPKIANYPFTTLHPNLGVVRIDENHSFVMADIPGLI
                     EGAAEGAGLGHRFLKHLSRTGLLLHVVDLAPFDETANPAEEALAIINELRKYDEELYD
                     KPRWLVLNKLDMLDEEEAQARSAAFLEAIGWDYPKPDDRFQFDMETPRLFQISALTHQ
                     GTQELVHQINQYLTEKKRIEAEKAEAEKAAANVEIIEQQPKTDTGVFKPE"
BASE COUNT         1822 a         2052 c         1993 g         2085 t
ORIGIN      
        1 atattaacga tttttcctca aggagcaaca caatgaaagt aggtttcgtc ggctggcgcg
       61 gtatggtcgg ttcggttttg atgcagcgta tgaaagaaga aaacgacttc gcccacattc
      121 ctgaagcgtt tttctttacc acttccaacg tcggcggcgc agcccctgat ttcggtcagg
      181 cagccaaaac attgttggat gccaacgatg ttgccgaatt ggcaaaaatg gacatcatcg
      241 ttacctgtca gggcggcgat tacaccaaat ccgtgttcca agccctgcgc gacagcggct
      301 ggaacggcta ctgggttgac gcggcatctt ctctgcgcat gaaagacgac gcgattatcg
      361 tcctcgaccc tgtcaaccgc aacgttatcg acaacggcct caaaaacggc gtgaaaaact
      421 acatcggcgg caactgcacc gtctccctga tgctgatggc tttgggcggc ctgttccaaa
      481 acgatttggt cgaatgggca accagcatga cctaccaagc cgcttccggc gcaggtgcga
      541 aaaacatgcg cgaactcatc agcggtatgg gcgcggttca cgcccaagtg gcggacgaac
      601 ttgccgatcc tgccggctcg attctcgaca tcgaccgcaa agtatccgat ttcctgcgca
      661 gcgaagacta tccgaaagcc aacttcggcg taccgctcgc cggcagcctg attccgtgga
      721 ttgacgtgga tttgggcaac ggccagtcca aagaagaatg gaaaggcggc gtggaaacca
      781 acaaaatcct cggccgcagc gacaatccaa ccgtgattga cggcctgtgc gtccgcgtcg
      841 gcgcgatgcg ctgccacagc caagccatca ctctgaagtt gaaaaaagac ctgcccgttt
      901 ccgaaatcga agcgattttg gcaggcgcga acgactgggt gaaagtcatc cccaacgaaa
      961 aagaagccag catccgcgag ctgacccccg ccaaagttac cggcacgctg tccgtccccg
     1021 tcggacgcat ccgcaaactg ggtatgggcg gcgaatacat cagcgcgttc accgtcggcg
     1081 accagctctt gtggggcgcg gccgagccgc tgcgccgcgt attgcgtatc gtgttgggca
     1141 gcctgtaagc cctgtttgaa tggaaatgcc gtctgaagcc tgtttcagac ggcattttcc
     1201 ttgcaaccct gccggataac gccctgccgg cactgccgac gtaaaaaata aaggattcca
     1261 tttccggcgg tatgcggcag cccgacttta tccgaacctg atgcgcctgc acgtcaatga
     1321 aaacagcccg atatgcggac ttcctgctac agccgaaatt ccgataaggc aagcgttcac
     1381 gccagcaaca tttcctgcat cagcttcata ccccactgcc agccgccgag cataccgttc
     1441 aaactgcccg aatgcgggga aaccaacagg cgcgcgttcc acgtatccgc ctgtttttgc
     1501 gcccaatctc gcggcacatc cccgtgttcg gacaccacca atgcggcacg gcagggacag
     1561 cggacgcgtt ggaaagtgtg ttccgcatcg tcggagaaaa tatcgggatg ctgcggtaca
     1621 aggatgatgt tggcaatttt cttccgtgtc aggatgtctg cgcggtacag ccacgccaag
     1681 aatgcggccg cacccgcgcc gtgtgcgaca acggcgatat gcctgccctg tatccgttcg
     1741 aatgccgtct gaagccctgc ctgccattcc cctatgcttt gaccggccga tgcttcggac
     1801 atctgcacga cgggataact gaccgcccaa cggtctatcc acatctgatc ttctccggca
     1861 tcgcgtatca gccaaagcgt caaatcttcg agttcgaaac cctgcatacc gccgcgccta
     1921 tttcagcagg tcccggaggg taaaggcgat gagcagcgaa gcggggacgc tcaatatggc
     1981 gcagacggtc aggcagacaa aaatattcac cacccgccgc cagcctttcc aacccaaaca
     2041 tttggacgca atcagcaggc agggcaggca aatcagcagc cacaccaacg cccatatcgg
     2101 gtttgccttg gtcggcgcaa gccagccctg catccgcgcc agcataaata tcgcccacac
     2161 cgacataggc agcacaaatg ccgccacgac ccatgccgcg cctattcctg tttttccgtc
     2221 cacattccaa tcatatttac ccaaaacttt attcggcagc atagtcatac tccacgacca
     2281 gcggcgcatg gtcggaaaat ttttcgtctt tataaacatg tgcggacacg gctttggcgg
     2341 caagttcggg cgtaaccatc tgataatcga tgcgccaccc gacatctttc gcatacgcct
     2401 gtccgcggtt gctccaccaa gtgtagcccg gattgtcggg ataaagcgtg cgccacatat
     2461 ccgtccagcc cagcgtatgg atgaccttgc ctatccactc gcgctcttcg ggcaggaagc
     2521 ccgaattttt ctgattgccc ttccagtttt tcaggtcgat gttttggtgg gcgatgttcc
     2581 agtcgccgca gacgacaatg tcgcgccctt cgtttttcat cgcttcgagc atagggtaaa
     2641 acgcatcgag gaaacggtat ttcacctgct ggcgttcttc tgcgctgctg ccgctgggca
     2701 aataaagcga aataacgctc aacctgccga aatcgcaacg cacaaaccgc ccttccctgt
     2761 cgaattcttc aatgcccata ccgatttgca cattgtcggg tttgcgtttg ctgtacaccg
     2821 ccacgccgct gtaaccacgc ttctcggcgc aatgccaata gccgtgcatc ccgtgcggat
     2881 ttttcatatc ggcagacaaa tcagcctcct gcgctttgag ttcctgcacg cagacaatgt
     2941 ccgcgcccga tgcggcgata tattcgtaaa aacctttttt gtaggcggag cggatgccgt
     3001 tgacgttggc ggaaatgatt ttaagcataa taaaaataag ttctcacaat gttcccatac
     3061 acaaagcagc acccggtgcg ccgcccggca tttcccattc ggccctgcct gctgaaaacg
     3121 gcggggcttc aagcgggaaa tgccgtctga aaacggaaaa agagcaaaag gcggtacttt
     3181 tgccctttcc gatacagttc aaccgcgccg ccaagtcgta ccgccggcgt tgtcttccag
     3241 aatgattttg tgttcgttca gaaggtcgcg gatgcggtcg gactctgccc agtttttatc
     3301 cgcgcgcgct tgtttgcgcc gtgcgattaa gtcttcgatt tcttcgttgg agaggccgtc
     3361 tgaagccgcg cctccttgca ggaactcaat cggatcgcgt tgcagcagtc cgatgatgcc
     3421 gcccaaggct ttcaggcagc cggcgagctg tgcgtcattg gttttgttca cttcgcctgc
     3481 cagttcgaac aacacggcaa ccgcttcgac cgtaccgaaa tcgtcgttca tggcggcgta
     3541 gaagcggcgg gtgtagccgt tggcgttttc ggataaatca aactcagccg ccggcgtgtt
     3601 tttcaaggtg gtgtacagac gggtcagcgc accttttgca tcgtccaaat gcgcgtcgga
     3661 atagttcaac gggctgcggt agtgggcgcg caggatgaag aagcgcacga cttcggggtc
     3721 gtattgtttc aacacttcgc ggatggtgaa gaagttgccc agtgatttgg acattttttc
     3781 gccgtccacg cggataaagc cgttgtgcag ccaatatttg acgtggctgg cgatgctttg
     3841 cccgtggtgg gtttgcgcgt gatgatgacc gcaggtatgc cccgtcgcgc cgacgctttg
     3901 ggcaatttcg ttttcgtggt gcggaaactg caaatccgcg ccgccgccgt ggatgtcgaa
     3961 ggtatcgccg aacaggtttt cactcatggc agagcattca atgtgccaac ccggacggcc
     4021 gttgccccac gggctttccc acgccggttc gcctgctttc gccgctttcc acaatacaaa
     4081 atcaagcgga tcgcgtttga aaccgtccac ttccacgcgc tcgcccgcgc gcaggtcgtc
     4141 caatgatttg cccgataatt gtccgtaagc cgaaaactcg cgcacggcgt agtaaacgtc
     4201 gccgtttgcg gcaggatagg ctttgccgtt ttgaatcagg gtctcaatca tggcaatcat
     4261 ctgcggaatg ttttctgttg ccttcggctc aatatccgga cgcaacacac ccaaagcatc
     4321 ggcatcttcg tgcatagcct gaatgaaacg cgcagtcagc tcgccgatgg tttcgccgtt
     4381 ttcagccgca cgggcgatga ttttgtcgtc gatgtcggtg atattgcgca cataagtgag
     4441 cggataaccg cactcgcgca accaacgggc aatcatgtcg aacaccacca tcacacgggc
     4501 atggcctaag tggcaatagt cgtaaacagt catgccgcaa acgtacatac gcacgttttc
     4561 agggtcgatg ggggcaaagg gttctttttg gcgggtaagg gtgttgtaga tggtggtcat
     4621 gggattatgg attaatcttt gttgctcgga tgataatttc tgttctgttc ctgtagatac
     4681 ggaccaagga acattacgta gttgcggatt attaatatgg ctgatatttg tgaaaattgg
     4741 ttctgcataa cagtttgcaa aattttttgt aaattctgat aatttaaact tatcttttaa
     4801 taagtttgct aaatctgatg acgagggata aagtttactt cttatactag gcatttcaat
     4861 atgaaggact atttttattt cgttacaatc taaagccaag cgagaaaaat ctttttcttc
     4921 ctgtttttct gctttaaatt tagcagaaac caatcctgcc aatgaatctc gaatttttct
     4981 tgcgattaaa tatggtaggt cagaaagttt ttcatctatt gattgggcat ttggctcaag
     5041 cccaagtcgg taataatctt taatttcgat tagccaaagt gtcgactcat gaagggctat
     5101 tatatctaca cctgagctgc cattatcgtc atctacactt tgatttatcc cgttctttcc
     5161 cttttcattt gtatcaattt tattacgtaa attacaactg ttctgaaaaa ttttataatg
     5221 ttcccattcg tcatacttgg taacgtaata atcttcagga aaagcaaagg ttaatctctt
     5281 ttctgtgatt gtagtcatag cttaacctca aatattcaga tacctgtctg cctgcataat
     5341 gttttcatct aacaatatca atgtgttcaa atcattaata ctgttccctt gctccacttt
     5401 tgttccatca tcggaagcaa tcaacgagaa aaaacgtaca ggtaaatccg tgttattttc
     5461 aagcttcaaa agttccaatt ctctcaataa gaataaagag tgtgttgcaa taaaaacctg
     5521 aataccctgt tgagataaag accaaataat acgggcagcc actttgatca atttaggatt
     5581 cagattagct tccggttcat cccaaaatag atagccttta tccagcaatg cccctgttgc
     5641 gattaaccgg gcaatcatga caaatttccg caaaccctct gctaccaaag gtgcttcaat
     5701 cttaccgccc gtatttgtca gcgatagata aaaccttcct tgttcttcag atacttttcc
     5761 gcccatcgcg ttctcaatag gttcgagcaa ttctcgaatt tttgtttctc tggggccttt
     5821 ggcaagcggg tgatttaatt gcatacaggt atcaaaccaa gtttcttcga aagggatgct
     5881 ttggttttga tacaaagaag tgaaccaagg gcaaagtgta attaattcgc ggctgggtaa
     5941 gaagataggt gtcggagtat attcattttc tttcaatccg atgctttgaa cattgacttg
     6001 cgatgatgag ttactggaaa aattcagact actatgcgta gtgccgtttt gcagttttaa
     6061 aacgatttcc gtacgcccgc gcccctgcaa acgtttgctc aacctgccca aggaatcggg
     6121 acggaaaaca ttcagtaatt tatcggcaaa acttttttgc aattctgttt tcagtaatct
     6181 gtttttggtg ttagatgtta cttctagcag gctgtataaa atttttaaca aatgtgtttt
     6241 gccacaaccg ttttcggcaa caataacatt gagattttca gaaaattcaa aagtatcgtt
     6301 tggaagaacg gtaaagtttg tcaactcaag cgactggata tattggttag atgacatttt
     6361 taatccattt caatcttgct ttaaaattgt ttcaaacaac cttttgtaga acaaatatcg
     6421 tctgaaaccc tttctttttt cactccggct taaacacgcc cgtatccgtt ttaggctgct
     6481 gttcgataat ttcaacattt gccgctgctt tctccgcttc ggctttttca gcttcgatac
     6541 gttttttctc ggtcaggtat tggttgattt ggtgtaccaa ttcctgcgtg ccttggtggg
     6601 tcagcgcgct gatttggaag aggcgcgggg tttccatgtc aaattggaaa cggtcgtcgg
     6661 gtttcgggta gtcccagccg atggcttcga ggaaggcggc gctacgcgct tgggcttctt
     6721 cttcatcgag catatcgagt ttgttcagca ccagccagcg tggtttgtcg tagagctctt
     6781 cgtcgtattt gcgcaattcg ttgatgatgg cgagggcttc ttcggcgggg ttggcggttt
     6841 cgtcgaaggg tgccaaatcg acgacgtgca gcaataatcc ggtgcgcgat aagtgtttga
     6901 ggaaacgatg ccccaaaccc gcgccttctg ccgcgccttc aatcaggccg gggatgtcag
     6961 ccatcacgaa gctgtggttt tcgtcgatgc gtaccacgcc taagtttgga tgcagggtgg
     7021 tgaaggggta gttggcgatt ttggggcgtg cggcggatac ggcggtaatc agggtggatt
     7081 tgccggcgtt gggcataccc aataagccga catcggcgag gactttgagt tcgagttgca
     7141 gggagcgggt ttcgccttct tcgccgggcg tggattgttt tggggcgcgg ttgacggagg
     7201 atttgaagtg gatgttgccc aagccgcctt tgccgccttt ggcaaggcag acgcgctgac
     7261 cgtggtaggt gaggtcggca acgatttcgt cggtgtcgag gtcgcggata agggtgccga
     7321 tgggcatttt gaggacgatg tcgtccgcac ctgcgccgta acgatcggag ccgtggcctt
     7381 tttcgccgtt tttggcttgg tagcgtttaa cgaagcggta ttcgacgagg gtgttggtgt
     7441 tttcgtcggc ttccgcccag acgctaccgc ctttgccgcc gtcgccgccg tccgggccgc
     7501 cgcgcggtac gaatttttcg cggcggaaac tggttgcgcc attaccgcct ttgcctgcgg
     7561 cgacttcgat ttttgcttcg tcgatgaatt tcattcaatg ctcttgtttg ttggtttcaa
     7621 atggggggtt cagacggatt accgtgtgtt ttgatgccgt ccgaacagaa tttcggacgc
     7681 tattataagg gataagcggt atttcaacac gccgtaccca aactatttgt tccgcccatc
     7741 ttaatgaatt tttaagcaaa tcttcagcct gcaaacaaaa ttatgtccaa cttctttggt
     7801 acaatcgcgc ctttttgaca ttccgacccg acggaatgtc cgttcaaacc gttacatata
     7861 ataagttttg gggctgtcct agataactag gataaactcg gttttactaa ttgttttaaa
     7921 atggaacaag aacttttatc tcactgttgt ta
//
LOCUS       DBBZXU010000089         7826 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.089, whole genome shotgun sequence.
ACCESSION   DBBZXU010000089 DBBZXU010000000
VERSION     DBBZXU010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7826)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7826)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7826
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.089"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(134..1825)
                     /gene="dld"
                     /locus_tag="ACJJDE_001653"
     CDS             complement(134..1825)
                     /gene="dld"
                     /locus_tag="ACJJDE_001653"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016901 - oxidoreductase activity, acting
                     on the CH-OH group of donors, quinone or similar compound
                     as acceptor [Evidence IEA];
                     GO_process: GO:0006089 - lactate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019516 - lactate oxidation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HGG7541550.1"
                     /translation="MSASQLLSRLTQTVGEKYIITDPAKTEQYRQGYRFGEGKALAVV
                     RPGSILEMWKILQACVEADVIVITQAANTGLTGGSTPDGNDYDRDIVIVNTMRMNIIQ
                     TINNNEQVVCLPGSTLNQLELLLKPLGREPHSVIGSSCIGASVLGGVCNNSGGALVQR
                     GPAYTEMALFAQINEEGRLELVNHLGIDLGDTPEEILTNLQGHHYQNKDIKQDAGKGH
                     DHAYCEHVRQVDEPTAARFNADPARHYEASGCAGKLMVFAVRLDTFPQEKQTAVFYIG
                     TNDINELTDIRRAALGEFESLPVSGEYIHRHAFDIADVYGKDTFYVIKKFGTHQLPKL
                     FDLKARVDRFGKKASFLPKHFSDKAMQFVSKYLPDHLPKSMRDYRDKYEHHLILKMGG
                     KGVDEARAFLKEYFAHHSGAFFECNAEETQAAMLHRFAVASAAIRYRAVHDDEVEDLV
                     ALDIALRRDDRDWFEKLPPEIDNKIIHKLYYGHFMCHVFHQDYIIKKGNDCMALEHEM
                     LHLLDQRGAQYPAEHNVGHLYEAKPALKQFYRKLDPTNSFNPGVGKTSKKKNWAE"
     gene            complement(1992..2088)
                     /gene="ffs"
                     /locus_tag="ACJJDE_001654"
     ncRNA           complement(1992..2088)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="ACJJDE_001654"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            2349..6182
                     /locus_tag="ACJJDE_001655"
     CDS             2349..6182
                     /locus_tag="ACJJDE_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3683 domain-containing protein"
                     /protein_id="HGG7541551.1"
                     /translation="MTTTTAPQRIREIPYNYTSYTDREIVIRLLGDEAWQILQDLRGQ
                     RKTGRSARMLFEVLGDIWVVVRNPYLVDDLLEHPKRRAALVREMRHRLNEIRKRRDDN
                     RQVDVLVAAAEKAVERFDSSFDETSQKRHQILERLSKITKPHNIMFDGLARVTHVTDA
                     TDWRVEYPFVVVNPDTEAEVAPLVRALIELDLVIIPRGGGTGYTGGAIPLDAMSAVIN
                     TEKLDKHRGVEFVELAGLDGRHPIIRCGAGVVTRRVEETAHQAGLVFAVDPTSADASC
                     VGGNVAMNAGGKKAVLWGTALDNLAYWQMVNPQGEWLRIERVRHNFGKIHDEETAIFD
                     VHTLDSDGLNVVKTERLEIPGHKFRKVGLGKDVTDKFLSGLPGVQKEGTDGIITSVAF
                     VLHKMPKYTRTVCMEFFGTVATATPSIVEIRDFLLAHESVRLAGLEHLDWRYVRAVGY
                     ATKAAGKGRPKMVLLADVVSDDEAAVEAAAEHICELARARDGEGFIAISPEARKTFWL
                     DRSRTAAIAKHTNAFKINEDVVIPLERLGEYSDGIERINIELSIQNKLKLCAALEQYL
                     SGKLPIDKMGTDLPTAELLGERGKHALAHVSAVKARWDWLLANLDTPLADYKARYGAA
                     VHAAPEAKDNESCFTAFRDFRLRVSVKADVMKPLSEIFSGKTDTKIIEGLGKIHAKTV
                     RGRVFVALHMHAGDGNVHTNIPVNSDDAEMLQTAYRSVERIMKIARSLNGVISGEHGI
                     GITKLEFLSDEEMQPFWNYKNQVDPKHTFNRHKLMKGSDLRNAYTPSFELLGAESLIM
                     EKSDLGTIADSVKDCLRCGKCKPVCSTHVPRANLLYSPRNKILGVGLLTEAFLYEEQT
                     RRGVSVKHFEELMDIGDHCTVCHRCVKPCPVNIDFGDVTVAVRNYLADSGHKRFAPAA
                     AMGMAFLNATGPKTIKALRAAMIQTGFPAQNFAYKIGKLLPIGTKKQKAEPKATVGKA
                     PIKEQVIHFINRPLPKSVPAKTPRSLLGIEDGKSIPIIRNPAAPEDAEAVFYFPGCGS
                     ERLFSQIGLAVQAMLWHVGVQTVLPPGYMCCGYPQDAGGNKAKAEEMSTNNRVAFHRM
                     ANTLNYLDIKTVVVSCGTCYDQLEKYRFEEIFPGCRIIDIHEYLLEKGVKLDGVQGQQ
                     YLYHDPCHTPIKTMNATQMASSLMGQKVVLSDRCCGESGMFAVKRPDIATQVKFRKQE
                     EIEKNLKELPQGEPVKMLTSCPACLQGLSRYTDDNNMPADYIVIEMAKHILGENWLDE
                     FVKKANNGGVEKVLL"
     gene            6258..7259
                     /locus_tag="ACJJDE_001656"
     CDS             6258..7259
                     /locus_tag="ACJJDE_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase"
                     /protein_id="HGG7541552.1"
                     /translation="MIDGQTTEPKQKTRIILAPMQGLVDDVMRDLLTRIGGYDECVSE
                     FVRITHTVHSRSIWLKYVPEIANGNKTFSGTPCTVQLLGSDADNMAANALEAVRFGAN
                     KIDLNFGCPAPTVNKHKGGAILLKEPELIFHIVKTLRGRLPAHIPLTAKMRLGYEDKS
                     RALECACAIAEGGACGLTVHARTKAEGYEPPAHWEWIRKIRDSVNIPVTANGDVFSLQ
                     DYIGIKTISGCNSVMLGRGAVIRPDLARQIKQYENGGPVKDTDFAEVSKWIRQFFELC
                     LTKEANNKYPIARLKQWLGMMKKTFDPAQTLFDRVRTVKDADEVRRILNAFEHEINV"
     gene            complement(7321..7503)
                     /locus_tag="ACJJDE_001657"
     CDS             complement(7321..7503)
                     /locus_tag="ACJJDE_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541553.1"
                     /translation="MFWYVIGFCSFVVALLSLWVNVGAFGMQEDDTPQSDYEKRLGLG
                     AKLKNKNTPDTEEKQQ"
     gene            7690..>7826
                     /locus_tag="ACJJDE_001658"
     CDS             7690..>7826
                     /locus_tag="ACJJDE_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541554.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRTR
                     YL"
BASE COUNT         1913 a         2186 c         2029 g         1698 t
ORIGIN      
        1 ttgggagggg cgcgcccgtg tgtcggcata cggtttgaaa gcgattaccc gacggggaac
       61 ttcaaacccg acaatgccgt ctgaacggcg ttttgccttc agacggcatt gcctgccttc
      121 aaagcggaca cgcttattcc gcccagtttt tctttttgct ggttttgcct acgcccgggt
      181 tgaagctgtt ggtcgggtca agtttgcggt aaaactgttt gagcgcgggt ttggcttcat
      241 acaaatgacc gacgttgtgt tcggcgggat attgcgcgcc gcgttggtct aaaagatgca
      301 gcatttcgtg ttccaacgcc atgcagtcgt tgcctttttt gatgatgtaa tcctgatgga
      361 aaacgtggca catgaaatgt ccgtagtaga gtttgtggat gattttattg tcgatttcgg
      421 gcggcagttt ttcaaaccag tcgcggtcgt cgcggcgcag ggcgatgtca agcgcgacca
      481 agtcttccac ttcgtcatca tgcacggcgc ggtagcggat ggcggcggag gcgacggcga
      541 aacggtgcag catcgcggct tgggtttctt cggcgttgca ctcgaaaaac gcgccgctgt
      601 ggtgtgcaaa atattctttt aagaacgcgc gcgcctcatc cacgcctttc ccgcccattt
      661 tcagaatcaa atggtgttcg tatttgtcgc ggtaatcgcg catggatttg ggcaggtggt
      721 cgggcaggta tttgctgacg aactgcatgg ccttgtcgga aaaatgtttg ggcaggaagc
      781 tggctttttt gccgaacctg tccacgcgcg ccttcaagtc aaataatttc ggcagttggt
      841 gcgtaccgaa ttttttgatg acgtaaaacg tgtctttgcc gtacacgtcg gcaatatcga
      901 aagcgtggcg gtggatgtat tcgccggaaa caggcaggct ttcaaattcg cccaaggcgg
      961 cgcggcggat gtcggtcagc tcgttgatgt cgttcgtgcc gatgtagaac acggcggttt
     1021 gtttttcttg cgggaaggtg tccaaacgga cggcaaaaac catcagtttg cccgcgcagc
     1081 ccgaggcttc gtaatggcgg gcggggtcgg cattgaaacg cgcggcggtc ggttcgtcca
     1141 cttggcggac gtgttcgcaa taggcgtggt cgtgtccttt gcccgcgtct tgtttgatgt
     1201 ctttgttttg ataatgatga ccttgcaggt tggtcaggat ttcttcgggc gtgtcgccca
     1261 agtctatgcc caagtggttg accagttcca acctgccttc ttcgttgatt tgggcgaaca
     1321 gtgccatttc ggtgtaggcc gggccgcgct gtaccaatgc gccgccggag ttgttgcaca
     1381 cgccgcccaa gacggacgca ccgatgcagg aagagccgat aaccgaatgc ggttcgcgtc
     1441 ccaagggttt cagcagcaat tcaagctggt tcagggtcga gccgggcagg cagacgactt
     1501 gttcgttgtt gttgatggtt tggatgatgt tcatccgcat ggtgttcaca atcacgatgt
     1561 cgcggtcgta atcgttgccg tcgggggtcg aaccgccggt cagtccggta ttcgccgcct
     1621 gcgtaatcac aatcacgtct gcttcgacgc acgcctgcag aattttccac atttccagaa
     1681 tgcttccggg gcgaaccacc gccaacgcct taccctcgcc gaagcggtaa ccttggcggt
     1741 attgttcggt tttcgcgggg tcggtaatga tgtatttttc gcctacggtt tgggtcagtc
     1801 ttgacagtaa ttgtgatgcg ctcatggcag tttccttaaa attgtcggca ggtgcattgc
     1861 acattggaat tgttttcaca ttgtagttat acgttatggc aaagtaaaga aaatgccgtc
     1921 tgaacggctt tcagacggca acggtgcgat acgggaacgc cggaacatca aagctccggc
     1981 gtttcaaata gggcggcggg ccaaaccccc ggcactggcg caccggagtg ggctgctggc
     2041 ttccgcccct gacccggtgt tccgatttgc catgcgggga gacccgcctc agagaaacgg
     2101 cattataacg ggttttctga aaaactcaac cgttttgata cggtcatacg ccggaaacac
     2161 cacctaaaat ttatatttga taatattgtc aacaatttct caaagcgtta ttttgtttct
     2221 ataagggtat ttcctgtttc ggcattgaaa aatatcaaaa attgaactac attatcgcct
     2281 tttcaaactc gcctgaaacc gaattttcag acggcattca aataaaaact gccaagcacg
     2341 gacacaccat gaccacgact actgcccctc agcgtattcg agaaattccc tataactata
     2401 cttcttatac cgaccgcgaa atcgtcatcc gcctgctggg cgacgaagcg tggcagattc
     2461 tgcaagactt gcgcggacag cgtaaaaccg gacgttcggc acggatgctg tttgaagtgt
     2521 tgggcgatat ttgggtagtt gtgcgcaatc catatctggt cgatgacttg ttggagcacc
     2581 cgaaacgccg cgccgcgctg gtgcgggaaa tgcgccaccg tttgaacgaa atccgcaaac
     2641 gccgcgacga taatcggcaa gtggatgtat tggttgcggc agcggaaaag gcagtcgagc
     2701 gttttgatag cagttttgat gaaaccagcc aaaaacgcca tcaaattttg gaacgcttaa
     2761 gcaaaattac caagccgcac aatattatgt tcgacgggct ggcgcgggta acgcatgtta
     2821 ccgatgcaac cgactggcgc gtcgaatatc cgtttgtcgt cgtcaatccc gacacggagg
     2881 cggaagtcgc gcctttggtg cgcgccttaa ttgagttgga cttggttatt atcccgcgcg
     2941 gcggcggtac gggttatacc ggcggcgcga ttcctttgga cgcaatgagc gcggtcatca
     3001 atacggaaaa gctggacaaa catcgcggcg tggaatttgt cgaactggcg ggcttggatg
     3061 gcagacatcc gattatccgg tgcggcgcgg gcgtggttac gcggcgagtg gaagaaaccg
     3121 cgcatcaggc aggtttggtg ttcgccgtcg atccgacttc tgccgacgcg tcctgcgtgg
     3181 gcggtaatgt agcgatgaac gcgggcggta aaaaagccgt gctgtggggg acggcgttgg
     3241 acaacctcgc ctactggcaa atggtcaacc ctcaaggcga atggctgcgt atcgaacgcg
     3301 tgcgccacaa tttcggcaaa atccacgacg aagaaaccgc aatatttgac gttcacacac
     3361 tggattcaga cggcctcaat gtcgtcaaaa ccgaacgctt ggaaattccc ggtcacaaat
     3421 tccgcaaagt cggtttgggc aaagacgtta ccgacaaatt cttgagcggc ctgcccggcg
     3481 tgcagaaaga aggcacggac ggcatcatca ccagcgttgc cttcgtgttg cataaaatgc
     3541 cgaaatacac gcgcaccgtg tgtatggagt ttttcggcac ggttgccacc gccacgccat
     3601 ctattgtcga aatccgcgac tttttgcttg cccatgaaag cgtacggctg gcaggtttgg
     3661 aacatttgga ctggcgttat gtccgcgccg tcggctacgc caccaaagcg gcgggcaagg
     3721 gacggccgaa aatggttttg ctggcggacg tggtttcaga cgacgaagcc gccgtagagg
     3781 cagccgccga acacatctgc gaacttgccc gcgcccgcga cggcgaaggc tttatcgcca
     3841 tatctcccga agcccgcaaa accttctggc tcgaccgcag ccgcaccgcc gccatcgcca
     3901 aacacaccaa cgcctttaaa atcaacgaag acgtggtcat cccactcgaa aggctcggcg
     3961 agtattcaga cggcatcgaa cgcatcaaca ttgagctttc cattcaaaac aaactcaaac
     4021 tctgtgccgc cttggagcaa tatctgtccg gcaaactccc catcgacaaa atgggaaccg
     4081 acctgccgac cgccgaactg ttgggcgaac gcggcaaaca cgccctggcc cacgtttccg
     4141 ccgtcaaagc gcgttgggac tggttgctcg ccaatctcga cacgccgctt gccgactaca
     4201 aggcccgcta cggcgcagcc gtccacgccg cgcccgaagc caaagacaat gaaagctgct
     4261 ttaccgcatt ccgcgatttc cgcctgcgcg tgtctgtcaa agcagacgta atgaagccgc
     4321 tttctgaaat cttcagcggc aaaaccgaca ccaaaatcat cgaaggcttg ggcaaaatcc
     4381 acgccaaaac cgtgcgcggc agagtctttg tcgccctgca tatgcacgcc ggcgacggca
     4441 atgtccacac caatatcccc gtcaattcag acgatgccga aatgcttcag acggcatacc
     4501 gttctgtgga acgcattatg aaaatcgccc gttcgcttaa cggcgtgatt tcgggcgaac
     4561 acggcatcgg catcaccaag ctcgaatttt taagcgatga agaaatgcag ccgttttgga
     4621 actacaaaaa ccaagtcgat cccaaacaca ccttcaaccg ccacaaactg atgaaaggat
     4681 cggacttacg caacgcctac acgccgtcgt tcgagctttt gggtgcggaa tcgctgatta
     4741 tggaaaaatc agatctcggc acgattgccg attccgtcaa agactgcctg cgctgcggca
     4801 aatgcaaacc cgtctgctct actcacgttc cgcgtgccaa cctgctgtac agtccgcgca
     4861 acaaaatcct cggcgtgggc ttgctgaccg aagccttctt atacgaagaa caaacccgcc
     4921 gcggcgtttc cgtcaaacac tttgaagaac tcatggacat cggcgaccac tgcaccgtgt
     4981 gccaccgctg cgtcaaaccc tgccccgtca acatcgactt cggcgacgta accgtagccg
     5041 tccgcaacta ccttgccgat tccggccaca aacgatttgc gcctgccgca gctatgggta
     5101 tggcgttttt gaacgccacc ggcccgaaaa ccatcaaagc ccttcgcgcc gccatgatac
     5161 agaccggctt cccagcgcaa aactttgcct acaaaatcgg caagcttctt ccgatcggca
     5221 cgaaaaagca aaaagccgaa cccaaggcaa ccgtcggcaa agccccaatt aaagaacagg
     5281 ttatccattt catcaaccgt cctttgccga aaagcgtacc cgccaaaaca ccgcgctcct
     5341 tattgggcat cgaagacggc aaaagcatcc ccatcatccg caaccccgcc gcgcccgaag
     5401 atgccgaagc cgtgttctac ttcccgggtt gcggttcgga acgcctgttc agccaaatcg
     5461 gacttgccgt tcaagccatg ctctggcacg tcggcgtaca aaccgtcctg ccgcccggct
     5521 atatgtgttg cggctatccg caagacgcgg gcggcaacaa ggctaaagcc gaagaaatga
     5581 gcaccaacaa ccgcgtggct ttccaccgta tggcaaacac cctcaactac ctcgacatta
     5641 agaccgtcgt tgtcagttgc ggcacttgtt acgaccagct cgaaaaatac cgctttgaag
     5701 aaatcttccc cggctgccgc atcatcgaca tccacgaata cctgctcgaa aaaggcgtga
     5761 aactcgacgg cgtgcaaggt cagcaatacc tctaccacga cccctgccac acccccatca
     5821 aaaccatgaa cgccacccaa atggccagca gcctgatggg gcagaaagtc gtcttaagcg
     5881 accgctgctg cggcgagtcc ggtatgttcg ccgtcaaacg acccgatatc gccacccaag
     5941 tcaaattccg caaacaagag gaaatcgaga aaaacctcaa agagctgccg cagggtgaac
     6001 ccgtcaaaat gcttacttcc tgcccagcct gcctgcaagg cttgagccgc tacaccgacg
     6061 acaacaatat gcctgccgac tacatcgtca tcgaaatggc gaaacacatc ctcggcgaaa
     6121 actggctaga cgagtttgtg aaaaaagcca acaacggcgg cgtggaaaaa gtattgctgt
     6181 aacaacggac acggaaatgc cgtctgaacg ccgaagtctt cagacggcat tgtttaaacc
     6241 caatacctac ccaaatcatg attgacggac aaacaaccga acccaaacaa aaaacccgaa
     6301 tcatccttgc ccctatgcag ggtctggtcg atgacgtgat gcgcgacctg ctgacgcgta
     6361 ttggcggcta cgacgaatgc gtcagcgaat ttgtacgcat tacccatacc gtgcattccc
     6421 gatccatatg gttaaaatat gtccccgaaa tcgccaacgg aaacaaaacg ttttccggca
     6481 cgccctgcac cgtccaactt ttgggcagcg atgcggacaa tatggcggcg aatgcgctgg
     6541 aagccgtccg cttcggtgcg aacaaaatcg atttgaactt cggctgcccc gcgcccaccg
     6601 tcaacaaaca caaaggcggc gcaatccttt taaaagagcc ggaactgata ttccacatcg
     6661 tcaaaacgct gcgcggacgt ttgcccgcac atattccgct caccgcaaaa atgcggctcg
     6721 gttacgaaga caaaagccgg gctttggaat gcgcctgtgc gattgccgaa gggggcgcat
     6781 gcggactgac cgtacacgcg cgtaccaaag ccgagggtta cgaaccgccg gcgcattggg
     6841 aatggataag gaaaatccga gacagcgtca atattcccgt taccgccaac ggcgacgttt
     6901 tcagcctgca agactatatc ggcatcaaaa caatcagcgg ctgcaacagc gtgatgctcg
     6961 gtcgcggcgc ggtcatccgc cccgatttgg cgcggcaaat caagcaatac gagaacggcg
     7021 ggccggtcaa agacacggat tttgccgaag tttccaaatg gatacggcag tttttcgagc
     7081 tgtgcctgac aaaagaggca aacaataaat acccgatcgc ccgtcttaag caatggttgg
     7141 gcatgatgaa aaaaacgttc gacccggcgc aaacgctgtt tgaccgcgtc cgaacggtta
     7201 aggatgcgga tgaagtccgc cgaatcctga acgcatttga gcatgagata aatgtttgac
     7261 tgtctcccat gcttcaaagc aaatgccgtc tgaaaatctt tcagacggca tttcatatct
     7321 ttattgctgc ttttcttccg tatccggcgt atttttgttt ttcagcttcg cacccaagcc
     7381 caaacgtttt tcataatccg attgcggggt atcgtcttcc tgcataccga atgcgccgac
     7441 attgacccac agcgacagca gcgcgacgac aaaggagcaa aagccgatta cataccaaaa
     7501 cattgcccct cccgatttgt taaaatcata tcaaatacag tgccgaattt atcacaaacg
     7561 cacgggcaaa tatagtgaat taaatttaaa taaggacaag gcggcgagcc gaagacagta
     7621 caaatagaga cctttgcaaa attccccaaa atcccctaaa ttcccaccaa gccatttagg
     7681 ggattttcca tgagcacctt cttccggcaa accgcacaag ccatgattgc caaacacatc
     7741 gaccgtttcc cgctattgaa gttggaccag gtaattgatt ggcagccgat cgaacaatac
     7801 ctgaaccgtc aaagaacccg ttacct
//
LOCUS       DBBZXU010000090         7776 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.090, whole genome shotgun sequence.
ACCESSION   DBBZXU010000090 DBBZXU010000000
VERSION     DBBZXU010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7776)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7776)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7776
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.090"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            13..123
                     /locus_tag="ACJJDE_001659"
                     /pseudo
     CDS             13..123
                     /locus_tag="ACJJDE_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            251..646
                     /locus_tag="ACJJDE_001660"
     CDS             251..646
                     /locus_tag="ACJJDE_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0022904 - respiratory electron transport
                     chain [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HGG7541555.1"
                     /translation="MFGLHKSFGFLTLTVITLRIVWAVANRAKRPQSDSKAAAAGHGI
                     LYLLMLAVPVIGMIRQYGSGRGPLKVFGVEVMQGSPEKIEWMANLGNTFHGNLGWLLF
                     AAVAGHVAMVVTHRVQGRDVLCRMTGRVR"
     gene            complement(671..1546)
                     /gene="rsmI"
                     /locus_tag="ACJJDE_001661"
     CDS             complement(671..1546)
                     /gene="rsmI"
                     /locus_tag="ACJJDE_001661"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HGG7541556.1"
                     /translation="MFQKHLQKASDSVVGGTLYVVATPIGNLADITLRALAVLQKADI
                     ICAEDTRVTAQLLSAYGIQGKLVSVREHNERQMADKIVGYLSDGMVVAQVSDAGTPAV
                     CDPGAKLARRVREVGFKVVPVVGASAVMAALSVAGVAGSDFYFNGFVPPKSGERRKLF
                     AKWVRAAFPIVMFETPHRIGATLADMAELFPERRLMLAREITKTFETFLSGTVGEIQT
                     ALAADGNQSRGEMVLILYPAQDEKHEGLSESAQNVMKILAAELPTKQAAELAAKITGE
                     GKKALYDLAVSWKNK"
     gene            1600..1947
                     /locus_tag="ACJJDE_001662"
     CDS             1600..1947
                     /locus_tag="ACJJDE_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HGG7541557.1"
                     /translation="MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKN
                     GGMILFVEVKYRKNRQFGGAAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIE
                     GSRPPEWIQNITG"
     gene            1952..2545
                     /locus_tag="ACJJDE_001663"
     CDS             1952..2545
                     /locus_tag="ACJJDE_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008968 - D-sedoheptulose 7-phosphate
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoheptose isomerase"
                     /protein_id="HGG7541558.1"
                     /translation="MTTLQERVAAHFAESIRAKQEAGKVLVEPTVQAAELMLQCLMND
                     GKILACGNGGSAADAQHFAAEMTGRFEKERMELAAVALTTDTSALTAIGNDYGFNHVF
                     SKQVRALGRAGDILVGISTSGNSANVIEAIKAAHERDMHVIALTGRDGGKIAAILKDT
                     DVLLNVPHPRTARIQENHILLIHAICDCIDSVLLEGM"
     gene            2609..3217
                     /locus_tag="ACJJDE_001664"
     CDS             2609..3217
                     /locus_tag="ACJJDE_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BON domain-containing protein"
                     /protein_id="HGG7541559.1"
                     /translation="MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTT
                     GAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFV
                     GQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
                     YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR"
     gene            3225..3875
                     /locus_tag="ACJJDE_001665"
     CDS             3225..3875
                     /locus_tag="ACJJDE_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541560.1"
                     /translation="MPSEPPSDGIARHPKSTIKMAKKPNKPFRLTPKLLIRVVLLICI
                     TAIGALAIGIVSTFNPNGGKTLQTEPQHTDSPRETEFWLPNGVVGQDAAQPEHHHAAS
                     SEPAQPDGTDESGSGLPSPAAPKKNRVKPQPADTAQTDRQPDDAGTQAENTLKETPVL
                     PTNVPRPEPRKETPEKQAQPKETPKEKETPKENHTKPDTPKNTPPKPHKEILDNLF"
     gene            3915..4694
                     /gene="map"
                     /locus_tag="ACJJDE_001666"
     CDS             3915..4694
                     /gene="map"
                     /locus_tag="ACJJDE_001666"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003677158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HGG7541561.1"
                     /translation="MNGIIIKTPEEIEKMRELGKLVAEALDYIGQFVKPGVTTDEIDK
                     LVYDYHVNVQGGYPAPLHYGNPPYPKSCCTSVNHVICHGIPDDKPLKEGDIINIDLTI
                     KKDGFHGDSSRMFTVGKVSPIAQRLIDVTHASMMAGIEAVKPGATLGDVGYACQQVAE
                     NAGYSVVQEFCGHGIGRGFHEAPQVLHYGKKGQGPVLKPGMIFTVEPMINQGKRHLRI
                     LNDGWTVVTKDRSLSAQWEHEVLVTETGYEILTVSPASGKP"
     gene            4849..5148
                     /locus_tag="ACJJDE_001667"
     CDS             4849..5148
                     /locus_tag="ACJJDE_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7541562.1"
                     /translation="MKIFENIEDVKAIRKKTGLNQIDFWGKVGVTQSGGSRYETGRKM
                     PKPVRELLRLVHIECIDLAKVNKKDMEIAALLKKHHPDLYAELSKQTKSERKKQS"
     gene            5386..5760
                     /locus_tag="ACJJDE_001668"
     CDS             5386..5760
                     /locus_tag="ACJJDE_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HGG7541563.1"
                     /translation="MKLLTTAILSSAIALSSMAAAAGTNNPTVAKKTVSYVCQQGKKV
                     KVTYGFNKQGLTTYASAVINGKRVQMPVNLDKSDNVETFYGKEGGYVLGTGVMDGKSY
                     RKQPIMITAPDNQIVFKDCSPR"
     gene            complement(5947..7413)
                     /locus_tag="ACJJDE_001669"
     CDS             complement(5947..7413)
                     /locus_tag="ACJJDE_001669"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate:quinone oxidoreductase"
                     /protein_id="HGG7541564.1"
                     /translation="MAEATDVVLVGGGIMSATLGVLLKELEPSWEITLIERLEDVALE
                     SSNAWNNAGTGHSALCELNYAPLGANGIIDPARALNIAEQFHVSRQFWATLVAEGKLE
                     DNSFINAVPHMSLVMNEDHCSYLQKRYDAFKTQKLFENMEFSTDRNKISDWAPLMMRG
                     RDENQPVAANYSAEGTDVDFGRLTRQMVKYLQGKGVKTEFNRHVEDIKRESDGAWVLK
                     TADTRNPDGQLTLRTRFLFLGAGGGALTLLQKSGIPEGKGYGGFPVSGLFFRNSNPET
                     AEQHNAKVYGQASVGAPPMSVPHLDTRNVDGKRHLMFGPYAGFRSNFLKQGSLMDLPL
                     SIHMDNLYPMLCAGWANMPLTKYLLGELRKTKEERFASLLEYYPEANPDDWELITAGQ
                     RVQIIKKDSEKGGVLQFGTEIVAHADGSLAALLGASPGASTAVPLMIRLMHQCFPERA
                     PSWEDRLKELVPGYGIKLNENPERADEIIAYTAKVLDI"
BASE COUNT         2015 a         2347 c         1893 g         1521 t
ORIGIN      
        1 cctaagtttt ttatgaacac aaaccaacct gccgtttacg acccgttgac acgcgcgctg
       61 cactggctga ccgttgccgg cttcatcggc attctgacca ccattgtcct gtggacgatt
      121 tatagtggat taacaaaaat caggacaagg cgacgaagcc gcagacagta caaatagtac
      181 ggcaaggcga ggcaacgccg tactggtttt tgttaatcca ctatacgaag aggcggaatg
      241 ggcgggcagc ctgttcggcc tgcacaaatc tttcggcttc ctcacgctga cggtgattac
      301 attgcgcatc gtgtgggcag ttgccaaccg cgccaagcgt ccgcaaagcg acagcaaggc
      361 tgcggcggca ggacacggca ttctgtatct gctcatgctt gctgttcccg ttatcggcat
      421 gatccgccaa tacggcagcg gccgcggccc gttgaaagtg ttcggcgttg aagtgatgca
      481 gggttcgccg gaaaaaatcg agtggatggc aaacttgggc aacacgttcc acggcaattt
      541 gggctggctg ctgtttgccg ccgtcgccgg acacgtcgcc atggtcgtca cccaccgtgt
      601 tcagggtaga gatgttctgt gccgcatgac ggggcgtgtc cgctgattcc gttcgcacta
      661 tggtgccgca ctatttgttt ttccacgaca ctgccaaatc gtacaaagcc tttttgccct
      721 cacctgtaat cttggcggca agctcggcag cctgtttggt cggcagttcg gcagcaagga
      781 ttttcatcac attttgcgcg gactcggaca agccttcgtg tttttcatcc tgcgccggat
      841 acagtatcaa caccatctcg ccgcgcgatt ggttgccgtc ggcagccaat gccgtctgaa
      901 tttccccaac cgtgccgctt aagaacgttt caaacgtttt cgtgatttcg cgcgccagca
      961 tcagacggcg ttcggggaac agttccgcca tatcggcaag cgtcgccccg atgcggtgcg
     1021 gcgtttcaaa cataacgata ggaaacgccg cccgcaccca tttggcaaac aatttcctac
     1081 gttcgcccga tttcggcggt acaaaaccgt tgaaataaaa atcggatccc gccacaccag
     1141 ccacactcaa agccgccatc accgcgcttg cgccgacaac agggacaact ttaaacccga
     1201 cctcacgcac gcggcgggcg agtttcgcgc ccgggtcgca cacggccggc gtacccgcat
     1261 cggaaacctg tgccacaacc atgccgtctg aaagatagcc gacaatcttg tccgccatct
     1321 gccgttcgtt gtgttcgcgc acgctgacga gtttgccctg aatgccgtac gcgctcaaaa
     1381 gctgcgcggt aacgcgcgtg tcttcggcac agatgatgtc cgccttttgc aataccgcca
     1441 aagcgcgcag ggtaatgtcc gccaaattgc cgatgggcgt ggcaaccacg tataatgtcc
     1501 ctccgacgac gctgtcggag gctttctgca agtgtttctg aaacataaaa aatgccgtct
     1561 gaaaaacaaa cattataaat tataaaggtt aaaccgatta tgcgcctaaa ccacaaacag
     1621 ggcgaggcag gggaagatgc cgcgcttgcc ttcctccaat cccaaggctg cacactgctt
     1681 gcccgcaact ggcactgcgc ctacggcgaa atcgacctga ttgtcaaaaa cggcggcatg
     1741 attctgtttg ttgaagtaaa ataccgcaaa aatcggcaat tcggcggtgc cgcatacagc
     1801 atttccccat ccaaattatt gaaactgcaa cgaagtgtag agtattatct gcaacagaac
     1861 aggttgacaa acgtaccgtg ccgcctcgac gcggtactca tcgaaggcag ccgcccgccc
     1921 gagtggatac agaatattac aggttgacga tatgacgaca ttacaagaac gcgttgccgc
     1981 ccattttgcc gaaagcatcc gtgccaagca ggaagccgga aaagtattgg tcgagccgac
     2041 cgtacaggct gccgagctga tgctgcaatg cctgatgaac gacggcaaga ttctggcgtg
     2101 cggcaacggc ggttcggctg ccgacgcgca gcacttcgcc gccgaaatga ccggacgctt
     2161 tgaaaaagag cgcatggaac tcgccgccgt cgccctgacc accgacacat ccgcgctgac
     2221 cgccatcggt aacgactacg gcttcaacca cgtcttcagc aaacaggtac gcgccctcgg
     2281 acgcgccggc gacatcctcg tcggcatttc cacttccggc aattccgcca acgtcatcga
     2341 agccattaaa gcggcacacg aacgcgatat gcacgtcatc gccctgaccg gccgcgacgg
     2401 cggcaaaatc gccgccatac tcaaagacac cgacgttctg ctcaacgtcc cccatccgcg
     2461 caccgcccgc attcaggaaa accacatcct gctgatacac gccatatgcg actgtatcga
     2521 ctccgtactg ctggaaggaa tgtaaccctt ttcagacggc atggcgcaaa gcaatgccgt
     2581 ctgaaacgcc caagaaagga agcccccgat gaaacccaaa ccgcacaccg tccgcaccct
     2641 gattgccgcc attttcagcc ttgcccttag cggctgcgtc agcgcagtaa tcggaagcgc
     2701 cgccgtcggc gcgaaatccg ccgtcgaccg ccgaaccacc ggcgcgcaaa ccgacgacaa
     2761 cgttatggcg ttgcgtatcg aaaccaccgc ccgctcctat ctgcgccaaa acaaccaaac
     2821 caaaggctac acgccccaaa tctccgttgt cggctacaac cgccacctgc tgctgctcgg
     2881 acaagtcgcc accgaaggcg agaaacagtt cgtcggtcag attgcacgtt ccgaacaggc
     2941 cgccgaaggc gtatacaact acattaccgt cgcctccctg ccgcgcactg ccggcgacat
     3001 cgccggcgac acttggaaca catccaaagt ccgcgccacg ctgttgggca tcagccccgc
     3061 cacacaggcg cgcgtcaaaa tcgttaccta cggcaacgta acctacgtta tgggcatcct
     3121 cacccccgaa gaacaggcgc agattaccca aaaagtcagc accaccgtcg gcgtacaaaa
     3181 agtcatcacc ctctaccaaa actacgtcca acgctgactc ggcaatgccg tctgaaccgc
     3241 cttcagacgg cattgcccga caccccaaaa gcacaatcaa aatggcaaaa aaaccgaaca
     3301 aacccttcag gctgaccccc aaactcctga tacgcgtcgt attgctcatc tgtatcaccg
     3361 ccatcggcgc attggcaata ggcatcgtca gcacattcaa cccgaacggc ggcaaaaccc
     3421 tccaaaccga accgcaacac accgacagcc cccgcgaaac cgaattctgg ctgccaaacg
     3481 gcgtagtcgg acaagatgcc gcccaacccg aacaccacca cgccgcctca tccgaacccg
     3541 cacagccgga cggcacagac gaaagcggca gcggactgcc gtcccctgcc gcacccaaga
     3601 aaaaccgggt caaaccgcaa cctgccgaca cagctcaaac cgacaggcag ccggacgacg
     3661 ccggaacaca agctgaaaac acactcaaag aaacccccgt actgcccaca aacgtccccc
     3721 gtcccgaacc ccgaaaagaa acacccgaaa aacaggcgca gcccaaagaa acacccaaag
     3781 aaaaagaaac gcccaaagaa aaccatacca aaccggacac cccgaaaaac acgccgccca
     3841 aaccccataa agaaattctc gacaacctct tctgacccgg cacggcaggc acacccgcaa
     3901 tccaaggaag cattatgaac ggcatcatca tcaaaacccc cgaagaaatc gaaaaaatgc
     3961 gcgagctggg caaactcgtc gccgaagccc tcgactacat cggacaattc gtcaaacccg
     4021 gcgtaaccac cgacgaaatc gacaaactcg tttacgacta ccacgtcaac gtccaaggcg
     4081 gctatcccgc ccccctgcac tacggcaacc cgccctaccc caaatcctgc tgcacctccg
     4141 tcaaccacgt catctgccac ggcattcccg acgacaagcc gctcaaagaa ggcgacatta
     4201 tcaacatcga cctcaccatc aaaaaagacg gcttccacgg cgactccagc cgtatgttta
     4261 ccgtcggcaa agtctccccc atcgcccaac ggctgatcga cgtaacccac gcctccatga
     4321 tggcgggcat agaagccgtc aaacccggcg cgacactggg cgacgtaggc tacgcctgcc
     4381 aacaggttgc cgaaaacgcc ggctattccg tcgtacagga attctgcgga cacggcatcg
     4441 ggcgcggttt ccacgaagcc ccgcaagtgt tgcactacgg aaaaaaaggg cagggccccg
     4501 ttctaaaacc gggtatgatt tttaccgtcg aaccgatgat caaccaaggc aaacgccacc
     4561 tgcgtatcct caacgacggc tggacggtgg ttaccaaaga ccgctccctc tccgcccaat
     4621 gggaacacga agtcttggtg accgaaaccg gctacgaaat cctcaccgtc agccccgcct
     4681 ccggcaaacc ctgaagccgg acgtatccgc cccataaaaa caaacaatgc cgtctgaaag
     4741 aaacggcaga tatgatatat aatataaaaa caggcttgac ccggcacatt acgaaaacaa
     4801 agcaaatcgg aatttgcccc gcaaccagac aaacttaaag gaagttttat gaaaatattt
     4861 gaaaatatag aagatgttaa agccatccgt aaaaagaccg ggctgaacca gatagacttc
     4921 tggggcaagg tcggcgttac ccagtctgga ggctcgcgct acgaaaccgg ccgcaaaatg
     4981 cccaaacccg tacgcgaact gctccgcctc gtccatatcg aatgcatcga tttggcgaaa
     5041 gtcaacaaaa aagatatgga aatcgccgcc ctgttgaaaa aacaccatcc cgacctgtat
     5101 gccgaattgt ccaaacagac caagtccgaa agaaaaaaac aaagttaaac cgcaacctcc
     5161 ggatgcccga aagtttttca tttccgaaaa acgcaaacaa tgccgtctga aacaccggac
     5221 aggtcgccgt atcccgcctg ccgcccctgc ctcaaaccgc cgaaccgccc gaacccgcct
     5281 ttttacaaac tttatccaat ttcctgttta tttcaggata cgccgacatt agaatgtcaa
     5341 acagctcgaa acgggcaaac tccacatcca tccaaaggaa taaaaatgaa acttctgacc
     5401 accgcaatcc tgtcttccgc aatcgcgctc agcagtatgg ctgctgctgc cggcacgaac
     5461 aaccccaccg ttgccaaaaa aaccgtcagc tacgtctgcc agcaaggtaa aaaagtcaaa
     5521 gtaacctacg gcttcaacaa acagggcctg accacatacg cttccgccgt catcaacggc
     5581 aaacgcgtgc aaatgcctgt caatttggac aaatccgaca atgtggaaac attctacggc
     5641 aaagaaggcg gttatgtttt gggtaccggc gtgatggatg gtaaatccta ccgcaaacag
     5701 cccattatga ttaccgcacc tgacaaccaa atcgtcttca aagactgttc cccacgttaa
     5761 tcaggcaaca aaaaacagcg ttttcagaaa tgaaaacgct gttttttgac tgttccatta
     5821 ttcacaaaag ggaaaaaacg attacctgcc ccgtgtacca aaacctgccc tgccggatga
     5881 agggcataac tggcagggac ggcgtcaaca ccatatgggg gtacggcttt tcttgaaaga
     5941 ttcggcttaa atatccaata ctttcgcggt ataggcgata atttcatccg ccctttcagg
     6001 gttttcgttc aacttgatgc cgtaacccgg taccagctct ttcagacggt cttcccaaga
     6061 cggggcgcgc tcggggaagc attggtgcat cagccggatc atcagcggca cagcggtcga
     6121 tgcgcccggc gacgcgccca gcaatgcggc gagtgagccg tcggcgtggg cgacaatctc
     6181 cgtaccaaac tggagcacgc cgcctttttc ggagtctttt ttaatgattt ggacgcgttg
     6241 ccctgcggtg atgagttccc agtcgtcggg gtttgcctcg gggtagtatt ccagcaggga
     6301 ggcgaagcgt tcttctttgg ttttacgcaa ttcgcccagc aggtatttgg tcagcggcat
     6361 attcgcccag ccggcgcaca gcataggata gaggttgtcc atatggatgg acagcggcaa
     6421 atccataagc gagccttgct tgaggaagtt ggaacggaag cctgcgtaag ggccgaacat
     6481 aaggtggcgt ttgccgtcca cgttgcgtgt gtcgaggtgc gggacggaca tcggcggcgc
     6541 gccgacggaa gcctgcccgt acactttggc gttgtgttgt tcggcggttt cggggttgct
     6601 gttgcggaag aacaggccgg acacggggaa gccgccgtag cctttgcctt cggggatgcc
     6661 ggatttttgc agcagggtca gcgcgccgcc gcccgcgccg aggaagagga agcgggtacg
     6721 gagggtgagc tgcccgtcgg ggttgcgggt atcggcggtt ttgagcaccc acgcgccgtc
     6781 ggattcgcgt ttgatgtctt cgacgtggcg gttgaactcg gtttttacgc ccttgccctg
     6841 caaatatttc accatttggc gcgtcagccg tccgaaatcg acatccgtac cttcggcgga
     6901 gtagttggcg gcgacgggtt ggttttcgtc ccggccgcgc atcatcagcg gagcccaatc
     6961 ggaaattttg ttccgatcgg tggaaaattc catattttca aaaagttttt gggttttaaa
     7021 cgcgtcataa cgtttttgaa gataagaaca atggtcttca ttcatcacca aagacatatg
     7081 cggcacggca ttgatgaagg aattgtcttc caacttgcct tccgcgacca gcgtcgccca
     7141 aaactggcgg ctgacatgaa actgttcggc aatattgagg gcgcgcgccg gatcgataat
     7201 cccatttgca cccaacggcg catagttcaa ttcgcacagc gcggaatgcc ccgtgccggc
     7261 gttgttccac gcgtttgacg attccaacgc cacatcttcc aagcgttcaa tcagggtgat
     7321 ttcccaagac ggttcgagtt ctttgagcaa aacgcccaaa gtcgcgctca taatgccgcc
     7381 gcccaccaag acaacgtctg tcgcttcagc catggtttac tcctaaaaaa caggcatctt
     7441 ctgcccttat ggttatttgc cgtactacaa acgcctgaat cgcaaaagca gggaaaaccg
     7501 acaatggtgt gtgtccgagt atgctgtttc ggggttggaa tgcgttgcaa gtatggcttc
     7561 cgacaccgct tcaggggctt gtaatatgtt atcgtgaatg tagtggattt tactgggaaa
     7621 tgcaaagttt ttctgtcgcc cgccaagtcg ggaaactgcg aaatgaaaaa taaaaatagt
     7681 tatttatcta tatatatcaa atttttaata gataaaaaat caaaattgtt tatatattaa
     7741 tttttaaaag attgtcagca tattgcgtta agtttt
//
LOCUS       DBBZXU010000091         7539 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.091, whole genome shotgun sequence.
ACCESSION   DBBZXU010000091 DBBZXU010000000
VERSION     DBBZXU010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7539
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.091"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(43..252)
                     /locus_tag="ACJJDE_001670"
                     /pseudo
     CDS             complement(43..252)
                     /locus_tag="ACJJDE_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006249760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(558..1817)
                     /gene="rho"
                     /locus_tag="ACJJDE_001671"
     CDS             complement(558..1817)
                     /gene="rho"
                     /locus_tag="ACJJDE_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003823056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HGG7541565.1"
                     /translation="MHVSELQTLHISKLLELAEEHGIENANRFRKQDLVFAIVRQMMK
                     KGEGFTCSGTLEILPDGFGFLRSADTSYLAGPDDIYVSPTQIRRFNLHTGDTIEGSVR
                     VPKDNERYFALVRLDTINGDHPEVCRHKILFENLTPLFPTEQLKLERDLKSEENLTGR
                     AIDLISPIGKGQRALLVAPPKSGKTVMLQNIAHAVTANYPEVELIVLLIDERPEEVTE
                     MSRSVRGEVVSSTFDEPAQRHVQVAEMVLEKAKRMVEHKKDVVILLDSITRLARAYNT
                     VVPTSGKILTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVETGSRMDDVIYEE
                     FKGTGNMELHLDRRMAEKRLFPAININKSGTRREELLVPNDQLQRMWLLRKFLHPMDE
                     IEATEFLNGKIKASKNNDDFFELMRGK"
     gene            complement(2037..4421)
                     /gene="ppsA"
                     /locus_tag="ACJJDE_001672"
     CDS             complement(2037..4421)
                     /gene="ppsA"
                     /locus_tag="ACJJDE_001672"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008986 - pyruvate, water dikinase
                     activity [Evidence IEA];
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0006090 - pyruvate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HGG7541566.1"
                     /translation="MADNYVIWFENLRMTDVERVGGKNASLGEMISQLTEKGVRVPGG
                     FATTAEAYRAFLAHNGLSERISAALAKLDVEDVAELARVGKEIRQWILDTPFPEQLDA
                     EIEAAWNKMVADAGGADISVAVRSSATAEDLPDASFAGQQETFLNINGLENVKEAMHH
                     VFASLYNDRAISYRVHKGFEHDIVALSAGVQRMVRSDSGASGVMFTLDTESGYDQVVF
                     VTSSYGLGENVVQGAVNPDEFYVFKPTLKAGKPAILRKTMGSKHIKMIFTDKAEAGKS
                     VTNVDVPEEDRNRFSITDEEITELAHYALTIEKHYGRPMDIEWGRDGLDGKLYILQAR
                     PETVKSQEEGSRNLRRFAINGDKTVLCEGRAIGQKVGQGKVRLIKDASEMDSVEAGDV
                     LVTDMTDPDWEPVMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATELLENGQE
                     VTVSCAEGDTGFIYAGLLDVQITDVALDNMPKAPVKVMMNVGNPELAFSFANLPSEGI
                     GLARMEFIINRQIGIHPKALLEFDKQDDELKAEITRRIAGYASPVDFYVDKIAEGVAT
                     LAASVYPRKTIVRMSDFKSNEYANLVGGNVYEPHEENPMLGFRGAARYVADNFKDCFA
                     LECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCEL
                     PSNAVLAEQFLQYFDGFSIGSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAIS
                     ACRKQNKYVGICGQGPSDHPDFAKWLVEEGIESVSLNPDTVIETWLYLANELNK"
     gene            4832..5653
                     /locus_tag="ACJJDE_001673"
     CDS             4832..5653
                     /locus_tag="ACJJDE_001673"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HGG7541567.1"
                     /translation="MSSPRHVFYISDRTGLTAENIGEALLNQFGNLSFKRHTHPFVDT
                     PEKARAVVEKVNRSRQENGQRPIAFVSVVDDEIRRIIKGADAFQINFFETFLGLLEKE
                     LNTEATASEQGHHSIGNTKRYDARMEAVNFSLNHDDGVSDKNLQEADVILMGVSRSGK
                     TPTCLYLALQYGIRAANYPLIPDDLESADLPRMVKPYRDKLFGLTIQPERLQAIRQER
                     RPNSTYAKIDTCRSEVADAQSMFRRHGIPFANTTDKSVEELAVHILQACKLKRRF"
     gene            complement(5893..6555)
                     /locus_tag="ACJJDE_001674"
     CDS             complement(5893..6555)
                     /locus_tag="ACJJDE_001674"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HGG7541568.1"
                     /translation="MIHAVLFDLDGTLADTALDLGGALNTLLARHGLPAKSMDEIRTQ
                     ASHGAAGLIKLGAGITPDHPDYARWRTEYLEEYDRRYAQDTELFDGVNELIAELNQRG
                     IKWGIITNKPMRFTDKLVPKLGFIIPPAVVVSGDTCGEPKPSIKPMLYACGQIHADPQ
                     HTLYVGDAERDIQAGRNAGMKTVLAEWGYISDEDDTDSWQADFHIRTPLDLLECLDKI
                     QP"
     gene            complement(6568..7395)
                     /locus_tag="ACJJDE_001675"
     CDS             complement(6568..7395)
                     /locus_tag="ACJJDE_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HGG7541569.1"
                     /translation="MKLDIYALLERALLSGDPDEKGRLTDEAFAAVQNMDGAETNTPP
                     ADFPRAGRPDKPVLVAPSQLTPRKMNTAEGYAAMLHAIAHIEFNAVNLALDAAYRFRT
                     LPFQFVRDWVKVAKEEVYHFRLMRDRLRAFGFDYGSFEAHNHLWDMAYKTAYDPLLRM
                     ALVPRVLEARGLDVTPGIRAKVAQRGDSETCGVLDIIYRDEVGHVAIGNHWYQHLCRE
                     RGLEPVALFRSLITRYDMFIFRGYVNIEAREKAGFSRFELDMLEDFEQGLKQNKNTV"
BASE COUNT         1581 a         1812 c         2194 g         1952 t
ORIGIN      
        1 tcaaaagttc ccaattccat tgatatggtt ttgtcgttca gcaaaataac tttcatctgc
       61 ttttacttcg ccgtcaaaca tttccaaatg cggactgttt tgataaataa gtaatcgtaa
      121 acgatgaaaa taataggctg cggtactttt attaacgcct actaactctg ctgctgttct
      181 tgcagttaca cctgcgacaa acagttcaat gagtttattt tgtttatact ggcttagacg
      241 actttttctc ataggggcaa ctctaactta atttgaattt ccctagttat ctaggacagc
      301 cccaaattta tacaaaaatg agcgcggttc ggcgcaacct tgaatcaagt tcccgcatcg
      361 gttttcattg ccggtacgga tgcgttcaag ccggtttttc aaaggccgcg ctttcggcaa
      421 gcggacacgg acactgccga cggttgcgcc gttaacgggg ggagggagga gctgcgccga
      481 ccgtgtgaat gaaagtgccg tctgaaaccc gattttcagg cttcagacgg catttcgcat
      541 taatgcgggc ggcgcgttta tttgccgcgc atcagttcaa agaaatcgtc gttgttttta
      601 gaggctttga ttttcccgtt taagaactcg gtagcttcga tttcatccat cgggtgcagg
      661 aacttgcgta agagccacat acgttgcaac tggtcgttcg gcacaagcag ctcttcgcgg
      721 cgcgtgccgg atttgttgat gttgatggcg gggaagaggc gtttttccgc catacggcga
      781 tcaaggtgca attccatatt gccggtgcct ttgaattctt cgtaaatcac atcgtccata
      841 cggctgccgg tttcaaccaa tgcggtggcg ataatggtca gcgaaccgcc ttcttccacg
      901 ttgcgcgccg caccgaagaa acgtttgggg cggtgcagcg cgttggcatc gacaccgccg
      961 gtcaggattt tgcccgaggt ggggacgacg gtattgtagg cgcgggcaag gcgggtaatc
     1021 gaatccagca ggatgaccac gtcttttttg tgttccacca tacgcttggc tttttcaagc
     1081 accatttcag caacttggac gtggcgttgc gccggttcgt caaaggtgga ggaaaccact
     1141 tcgccgcgga cggaacggct catttcggtt acttcttcgg gacgctcgtc aatcaagagg
     1201 acgatgagtt cgacttcggg atagtttgcg gtaacggcgt gggcaatatt ttgcagcatc
     1261 acggttttac cgcttttggg cggggcaacc aagagggcgc gctgaccttt gccgatgggg
     1321 gaaatcaggt cgatggcgcg tccggtcagg ttttcttcgg actttaagtc gcgttccagc
     1381 ttcaactgtt cggtcggaaa cagcggggtc aggttttcaa acaggatttt atggcggcat
     1441 acttccgggt ggtcgccgtt gatggtatca agcctgacca gggcaaaata gcgttcgttg
     1501 tcttttggga cgcgcacgct tccttcgatg gtgtcgcccg tatgcaggtt gaagcggcgg
     1561 atttgggtgg gtgagacata gatgtcgtcg ggaccggcaa gataggacgt gtccgcgctg
     1621 cggaggaagc cgaagccgtc gggcaggatt tcaagcgtgc cggagcaggt gaaaccctcg
     1681 ccttttttca tcatctggcg gacgatggca aatacgaggt cttgtttgcg gaatcggttg
     1741 gcgttttcga tgccgtgttc ttccgccaat tctaagagtt tggaaatgtg cagggtttgt
     1801 aattcggaga cgtgcataat aatgatgtat tttgaagagg aaaaagacag gcagatgccg
     1861 tctgaaagaa gaagctgacc gttgccggtt gctcggggaa gggggaattg taggcagtcg
     1921 gcgcgtgggt gtcaaatatt atcgcggacg gggcatcggc agaaaatgcc gtctgagcgg
     1981 agctgcttgg aaaaaaatac ccccgcgctt ttcaggctcg ggggtatggg cattgattat
     2041 ttgttcaatt cattcgccaa atacagccaa gtttcgatga cggtatccgg gttcagggaa
     2101 acgctttcga taccttcctc aaccagccat ttggcgaagt ccggatggtc ggacgggcct
     2161 tgaccgcaga tgccgacata tttgttctgc ttgcggcagg cggagatggc aaggtgcagc
     2221 atcactttga cggcagggtt gcgttcgtca aacgattcgg ataccaagcc gctgtcgcgg
     2281 tcgagaccga gggtcagttg ggtcatgtcg ttcgagccga tggagaagcc gtcgaagtat
     2341 tgcaggaatt gttccgccaa taccgcgttg ctcggcagct cgcacatcat aatcaggcgc
     2401 aggccgtttt tgccgcgttc caagccgttt tctttcaggg ctttgacaac ggcttcggct
     2461 tcgcccaaag tgcggacgaa cggaatcatg atttcaacgt tggtcagacc catttcatcg
     2521 cggacgcgtt tcaaggcttt gcattccaag gcgaaacagt ctttgaagtt gtcggcgaca
     2581 taacgcgccg cgccccggaa gcccaacatc gggttttctt catgcggttc gtatacgttg
     2641 ccgccgacca ggttggcgta ttcgttggat ttgaagtcgg acatacggac gatggtttta
     2701 cgcggataaa ccgatgcggc caatgtcgcc acgccttcgg cgattttatc gacgtagaag
     2761 tcgacagggg acgcgtaacc ggcgatacgg cgggtaattt ccgcttttaa ttcgtcgtct
     2821 tgtttgtcaa attccaacaa ggctttcggg tggataccga tttggcggtt gatgataaat
     2881 tccatacgcg ccaagccgat gccttcgctg ggcaggttgg cgaagctgaa tgcgagttcg
     2941 gggttgccga cgttcatcat gactttgacg ggtgctttgg gcatattgtc caaggcgaca
     3001 tcggtgatct gtacgtccaa caggccggca tagatgaagc cggtatcgcc ttcggcgcag
     3061 gatacggtca cttcctgacc gttttccaag agttcggtcg cattgccgca gccgacgacg
     3121 gcaggaatac ccagttcgcg cgcgatgatg gcggcgtggc aggtacggcc gccgcggttg
     3181 gtcacgatgg cggaagcacg tttcatcacc ggttcccaat ccgggtcggt catatcggta
     3241 acgagtacgt cgccggcttc gacggaatcc atctcggaag catctttaat caggcgtacc
     3301 ttgccctgac cgactttctg accgatggca cggccttcgc ataatacggt tttatcgccg
     3361 ttgatggcga agcggcgcag gttgcggctg ccttcttcct gggatttgac ggtttcgggg
     3421 cgggcttgca ggatgtagag tttgccgtcc aagccgtcgc gtccccactc gatgtccatc
     3481 gggcggccgt agtgtttttc gatggtcagt gcgtaatgcg ccaactcggt gatttcttcg
     3541 tcggtaatgg agaagcggtt gcggtcttct tcggggacat cgacgttggt taccgatttg
     3601 ccggcttcgg ctttgtcggt aaaaatcatt ttgatgtgtt tcgaacccat ggttttacgc
     3661 aggatggcgg gcttgcccgc tttgagcgtg ggtttgaaca cataaaattc gtccgggttg
     3721 accgcacctt gtacgacgtt ttcgcccaga ccgtaagagg aggtaacaaa gacgacttga
     3781 tcgtagccgg attcggtgtc gagggtgaac atcacacctg atgcgccgct gtcggaacgc
     3841 accatgcgtt gaacgccggc ggaaagggcg acgatatcgt gttcgaagcc tttgtggaca
     3901 cggtaggaaa tggcgcggtc gttgtacagg gaggcgaata catggtgcat cgcttcttta
     3961 acgttttcca atccgttgat gttcaagaag gtttcctgtt ggccggcaaa tgatgcgtcg
     4021 ggcaggtctt cggcggttgc ggaagagcgt acggcaacgg aaatgtccgc gccgccggca
     4081 tcggcaacca ttttgttcca tgccgcttcg atttcggcat cgagctgttc ggggaagggt
     4141 gtgtccaaaa tccattggcg gatttctttg ccgacgcgtg ccagttcggc aacgtcttcg
     4201 acatccaatt ttgccagtgc ggcggaaatg cgttcgctca gaccgttgtg tgcgaggaat
     4261 gcgcggtagg cttcggctgt ggtggcaaag ccgccgggga cgcgaacgcc tttttcggtc
     4321 agctgactga tcatttcgcc cagcgaggcg tttttaccgc ccacgcgttc aacatctgtc
     4381 atacgcaggt tttcaaacca aattacgtag ttgtcggcca tttgtgtgtc caatccaaaa
     4441 tatgttaaaa aagaaacaaa tccgcgtgct tattttaagc gattcgttcc tctgctgtca
     4501 tgtgttttat ccgttttaaa atcatgatgc cgtctgaaaa attgcggttt cggcgtgtgt
     4561 agcggtttga aacttgcagc cggtatactt ctttttttgg gtattttctt tgtaaaacag
     4621 gtggtttgaa taggttaatg ttttttctgt ttgatttttt tgtttatttt ttaaaatttt
     4681 ctgccaaaaa atactttata taaataattt tatttcaaaa ttatattgtg tctgtttggg
     4741 tgtaatccga ggtaggcgtg ctgcgggtgc tttccttgtg tctgccgctg ctgttatgat
     4801 gatattttta ttctgtattt aaggatggaa gatgagcagt ccgcgccatg tgttttacat
     4861 ttccgaccgt accggtctga ctgccgagaa tatcggcgag gctttgctga accagtttgg
     4921 caatctgtcg ttcaaacgcc atacgcatcc gtttgtcgat acgccggaaa aggcgcgcgc
     4981 ggtggtggag aaggtcaatc ggagccggca ggaaaacggt cagcgtccga ttgcgtttgt
     5041 cagtgtggtt gatgacgaaa tccgtcggat tatcaaaggg gcggatgctt ttcagattaa
     5101 tttctttgag acttttttgg gactgttgga gaaagaactc aataccgaag ccacggcatc
     5161 cgagcagggg catcacagta tcggtaatac gaagcgttac gatgcgcgta tggaggcggt
     5221 aaatttctca ttgaaccacg atgacggggt cagcgataag aaccttcagg aagcggatgt
     5281 aatcttgatg ggtgtatcgc gttcgggcaa aacgccgacc tgcctttacc tcgccctgca
     5341 atacggcatc cgtgcggcaa actatccgct gattcctgac gatttggaat cggccgatct
     5401 gccgcgtatg gtcaagcctt atagggataa gctgttcggg ttgaccatcc agccggaacg
     5461 tttgcaggcc atccgccaag agcgccgccc gaattcaact tatgccaaaa tcgatacatg
     5521 ccgcagcgag gtggcagacg cgcagagtat gttcagacgg catgggattc cgtttgcgaa
     5581 tacgacggat aaatcagtgg aagagcttgc cgtacacatc cttcaggcgt gcaagctcaa
     5641 acgcaggttt tgacgggttt tgattcggtt tgaaggtgga aatgccgtct gaaatcaggt
     5701 ttcagacggc agttttatag tggattaaca aaaatcatga caaggcgacg aagccgcaga
     5761 cagtacaaat agtacggagc cgattcactt ggtgcttcag caccttagag aatcgttctc
     5821 tttgagctaa ggcgaggcaa cgctgtactg gtttagattt aatccactat atgtttgtgg
     5881 ggcggatatt tttcagggct gtattttgtc cagacattcg agcagatcga gcggcgttcg
     5941 gatgtggaaa tccgcctgcc atgagtcggt atcgtcttca tctgagatgt agccccattc
     6001 ggcgaggacg gttttcatgc cggcgttgcg gcctgcttgg atgtcgcgtt cggcatcacc
     6061 gacgtagagt gtgtgttgcg ggtcggcgtg gatttgtccg cacgcataca gcatgggttt
     6121 gatgctgggc ttgggttcgc cgcaggtgtc gccgctgacg acgacggcgg gtgggatgat
     6181 gaagccgagt ttggggacga gtttgtcggt gaagcgcatg ggtttgttgg tgatgatgcc
     6241 ccatttgatg ccgcgttggt tgagttcggc aatgagttcg ttcacgccgt caaagagctc
     6301 ggtgtcttgg gcgtagcggc ggtcgtattc ctccagatat tcggtgcgcc atcgggcata
     6361 gtcggggtgg tcgggggtga tgcctgcgcc gagtttgatc agtcctgccg cgccgtggct
     6421 ggcttgggtg cggatctcgt ccatgctttt tgcaggtagt ccgtggcgag cgagcagggt
     6481 gttgagtgcg cctccgaggt cgagggcggt gtcggcaagt gtgccgtcga ggtcgaagag
     6541 tacggcgtgt atcatgtgtg ttccttttca gacggtattt ttgttctgtt tcaaaccctg
     6601 ctcgaaatct tccagcatat ccaattcaaa gcggctgaag cccgcttttt cgcgcgcttc
     6661 gatgttcaca tagccgcgga agataaacat atcgtaacgg gtaatcagac tgcggaacag
     6721 ggcgacaggt tccaaaccgc gttcgcggca gaggtgttga taccaatggt tgccgatggc
     6781 gacatggccc acttcgtcgc ggtaaatgat gtccaatacg ccgcaggttt ccgaatcgcc
     6841 gcgctgcgcc accttcgcgc gtatccccgg cgtaacgtcc agcccgcgcg cttccaacac
     6901 gcgcggtacc aacgccatac gcaacagcgg gtcgtaggcg gttttgtacg ccatatccca
     6961 caaatggttg tgcgcctcga aactgccgta atcgaagccg aaagcgcgca atctgtcgcg
     7021 catcaggcgg aaatggtaca cctcttcctt cgccactttc acccagtcgc ggacaaactg
     7081 aaacggcagc gtgcggaaac ggtatgccgc gtccaaagct agattgacgg cgttgaattc
     7141 gatatgcgca atcgcgtgca gcatcgccgc atagccttct gccgtgttca ttttgcgcgg
     7201 ggtcagttgc gacggcgcga ccaaaacagg cttgtccggc cgtcccgctc gggggaagtc
     7261 cgccggcggc gtgtttgttt cagcaccgtc catgttctga acggcggcaa acgcctcatc
     7321 cgtcagccgt cctttttcat ctgggtcgcc cgaaagcagg gcgcgttcca gcaaagcata
     7381 aatatcgagt ttcatctcaa gtccgccgtg ttcggaaaac aaatattata gcgttttaaa
     7441 aaaaacaaga tgaggcatat aatctccgcg attcggcatt ccgcgcccaa accgtcaaat
     7501 atagtggatt aacaaaaacc ggtacggcgt tgcctcgcc
//
LOCUS       DBBZXU010000092         7512 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.092, whole genome shotgun sequence.
ACCESSION   DBBZXU010000092 DBBZXU010000000
VERSION     DBBZXU010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.092"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..328
                     /locus_tag="ACJJDE_001676"
     CDS             <1..328
                     /locus_tag="ACJJDE_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glucosamine-fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HGG7541570.1"
                     /translation="TEEGIAQTVVKGKTTRAEVEARFGKRNPFGCYAYHEVSLPIYNF
                     LPTNFIYMKSERRHWEWCVDYDWEGVVRDYRFTHKVEKDERSVIRDAVGVIRKEAGKS
                     LSQPEK"
     gene            392..1675
                     /gene="hemL"
                     /locus_tag="ACJJDE_001677"
     CDS             392..1675
                     /gene="hemL"
                     /locus_tag="ACJJDE_001677"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042286 - glutamate-1-semialdehyde
                     2,1-aminomutase activity [Evidence IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HGG7541571.1"
                     /translation="MNRNEILFDRAKAIIPGGVNSPVRAFGSVGGVPRFIKKAEGAYV
                     WDENGTRYTDYVGSWGPAIVGHAHPEVVEAVREAALGGLSFGAPTEGEIAIAEQIAKI
                     MPSVERLRLVSSGTEATMTAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGLLTF
                     GNPSSAGVPADFTKHTLVLEYNNIAQLEEAFAQSGNDIACVILEPFVGNMNLVRPTEA
                     FVKALRELTEKHGAVLIYDEVMTGFRVALGGAQSLHGIMPDLTTMGKVIGGGMPLAAF
                     GGRKDIMECISPLGGVYQAGTLSGNPIAVAAGLKTLEIIRREGFYENLTARTEQLVQG
                     FQTAADAAGIEFAADSVGGMFGLYFAAHAPRNYADMARSNIDAFKRFFHGMLDRGIAF
                     GPSAYEAGFVSAAHTPELIDETVAVAVEVFKAMAA"
     gene            complement(1891..2163)
                     /locus_tag="ACJJDE_001678"
     CDS             complement(1891..2163)
                     /locus_tag="ACJJDE_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taxon MazF"
                     /protein_id="HGG7541572.1"
                     /translation="MPSEAQILHFRRHFYSRLKSKIYTPVIPAQAGIRKVGLVGHEVV
                     LKMKRYRKSDELKEKYSDIDETFEFIKGFIYVIALAFTAYVAIRFF"
     gene            complement(2174..2737)
                     /gene="orn"
                     /locus_tag="ACJJDE_001679"
     CDS             complement(2174..2737)
                     /gene="orn"
                     /locus_tag="ACJJDE_001679"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HGG7541573.1"
                     /translation="MQDKNNLCWLDMEMTGLNPETDRIIEVAMIITDSDLNVLAQSEV
                     YAVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATP
                     MCGNSIHQDRRFMVKYMPKLENYFHYRNLDVSTLKELAKRWNPPVAKSVVKRGSHKAL
                     DDILESIEEMRHYREHFLISAPRAEAQ"
     gene            complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="ACJJDE_001680"
     CDS             complement(2755..3642)
                     /gene="prmA"
                     /locus_tag="ACJJDE_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HGG7541574.1"
                     /translation="MPYQQITVNVNDAVAERLADALMEHGALSAAIEDAYAGTQNEQA
                     IFGEPGMPAEQIWQQSKVIALFGEHDEAAAIIQTAAQECGLKDLAYTGETLEDQDWVR
                     LTQAQFDPIQISERLWITPSWHEAPEGTAVNLRLDPGLAFGTGSHPTTRLCLKWLDTQ
                     LKNGESVLDYGCGSGILTIAALKLGAGSAVGVDIDEQAVRAGRDNAAQNNVDAQFFLP
                     DGLPQGQFDVVVANILANPLRMLGEMLAARTKQGGRIVLSGLLDEQAEELGGIYSQWF
                     DLDPAETEEGWARLSGVKR"
     gene            complement(3760..5121)
                     /gene="accC"
                     /locus_tag="ACJJDE_001681"
     CDS             complement(3760..5121)
                     /gene="accC"
                     /locus_tag="ACJJDE_001681"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HGG7541575.1"
                     /translation="MLKKVLIANRGEIALRVLRACREMGIATVAVHSEADKDSLHVKL
                     ADESVCIGPAASAQSYLNVPAIIAAAEVSCADAVHPGYGFLAENADFAEQVEQSGFTF
                     IGPKPDTIRLMGDKVSAKHAMIAAGVPCVPGSDGALPDDGEEILKIADKVGYPVIIKA
                     SGGGGGRGMRVVEKKEDLLQSVEMTKAEAGAAFGNPMVYMERYLQRPRHVEIQVIADE
                     HGNAIYLAERDCSLQRRHQKVIEEAPAPFITEKERAKIGNACADACKRIGYRGAGTFE
                     FLYEDGEFFFIEMNTRVQVEHPVTELITGVDIVQEQLRIAAGLPLQYKQKDIQVEGHA
                     FECRINAEDPYNFIPSPGPIESCHLPGGFGIRVDSHIYQGYRIPPYYDSLIGKICVHG
                     KTREQAMAKMRVALAELAVTGIKTNTPLHRDLFADAGFQKGGVSIHYLEHWLEDRKAK
                     QDK"
     gene            complement(5235..5690)
                     /gene="accB"
                     /locus_tag="ACJJDE_001682"
     CDS             complement(5235..5690)
                     /gene="accB"
                     /locus_tag="ACJJDE_001682"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HGG7541576.1"
                     /translation="MDLRKLKKLIDLVEESGIAEIEVTEGEEKVRITRTIAAAPVYAA
                     PVPAAAPAVTPAAAPVAASAPAAAPAARDLSDAQKSPMVGTFYRAPGPNAAPFVEVGQ
                     QVKAGDTLCIIEAMKLMNEIEAEKSGTVKEILVENGTPVEFGEPLFIIG"
     gene            complement(5672..5929)
                     /locus_tag="ACJJDE_001683"
     CDS             complement(5672..5929)
                     /locus_tag="ACJJDE_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HGG7541577.1"
                     /translation="MRKIKLPAHFPQKPPFFDILLDIYRQLRENKHILTVVFHHRKTV
                     SEHHSARFAPLPQAGCFLKNQRNNPPEHRQPLKEQKWICAN"
     gene            6046..7086
                     /gene="queA"
                     /locus_tag="ACJJDE_001684"
     CDS             6046..7086
                     /gene="queA"
                     /locus_tag="ACJJDE_001684"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HGG7541578.1"
                     /translation="MDISDFDFTLPEKLIAQHPPEVRGSSRLLVALPDMPLQDRVFGD
                     LPDYVEAGDVLVFNNTKVMKARLFGQKDSGGRIEALIERVLDNHTALAHIRSSKSPKP
                     GMGLVFEGGIRAVMVGREGELFCLRFEGGQTVYELLEQNGHLPLPPYIERAADADDDS
                     RYQTVYAKYQGAVAAPTAGLHFTEELLRRLKDKGAVTAEVTLHVGAGTFQPVRVEKIE
                     EHKMHSEWFEVPSETAAAVEAAKARGNKVWAVGTTSMRALESAARATGRLKAGQGDTD
                     IFITPGYRFNVVDRLVTNFHLPKSTLLMLVSAFSGMGHIRAAYRYAVEREYRFFSYGD
                     AMVLGRNEGVVR"
BASE COUNT         1558 a         1899 c         2234 g         1821 t
ORIGIN      
        1 gacggaagag ggaatcgcac aaacggttgt taaaggcaaa acgactcggg cggaggtaga
       61 ggcacgtttc gggaagcgca accctttcgg ttgttatgcc tatcatgaag tcagcctgcc
      121 gatttataat tttttgccga ccaatttcat ttatatgaaa tcagaacgcc ggcattggga
      181 gtggtgtgtg gattacgact gggaaggagt tgtccgggac taccgcttta cacataaagt
      241 ggaaaaagac gagcgttccg tcatccggga tgcggttggc gtcatccgca aagaagcagg
      301 caaatccttg tcgcaacctg aaaaatgata aaatgggact ttctgcttct aagcccgaaa
      361 cctgccgttc agacggcatt tgaggataaa tatgaaccgt aacgaaattt tattcgaccg
      421 cgccaaagcc atcatccccg gcggcgtgaa ttcccccgtc cgcgcattcg gcagcgtcgg
      481 cggcgtgccg cgcttcatca aaaaagccga aggcgcgtat gtttgggacg aaaacggcac
      541 gcgttatacc gactatgtcg gctcttgggg gcctgcgatt gtcggacacg cgcaccccga
      601 agtcgtcgaa gccgtgcgcg aagccgcgtt gggcggtttg tcgttcggcg cgcccaccga
      661 gggcgaaatc gccattgccg aacaaatcgc caaaatcatg ccgtccgtcg aacggctgcg
      721 cctcgtcagc tccggtaccg aagcgacgat gaccgccatc cgtttggcac gcggttttac
      781 cggtcgcgac aaaatcatca agtttgaagg ctgctaccac gggcattccg acagcctgct
      841 ggtgaaagcc ggcagcggcc tgctgacgtt cggtaatccc tcttccgccg gtgtgcctgc
      901 cgactttacc aaacacactt tagtccttga gtacaacaac atcgcccaat tggaagaagc
      961 ctttgctcaa agcggcaatg acattgcctg tgtgattttg gagccttttg tcggcaatat
     1021 gaaccttgtc cgcccgaccg aagccttcgt caaagccctg cgcgaattga ccgaaaaaca
     1081 cggcgcggtg ttgatttacg acgaagtgat gaccggtttc cgcgtcgcgc tcggcggcgc
     1141 acaatcgctg cacggcatca tgcccgacct gaccacgatg ggcaaagtca tcggcggcgg
     1201 tatgccgctt gccgcgttcg gcgggcgcaa agacattatg gaatgtattt ccccactggg
     1261 cggcgtgtat caggcaggta cattatcagg caacccgatt gccgtcgccg ccggtttgaa
     1321 aacgctggaa atcatccgcc gcgaagggtt ttatgaaaac ctgacggcgc gtaccgaaca
     1381 gttggttcaa ggttttcaga cggcagcgga tgcggcgggc atcgagtttg ccgccgacag
     1441 cgtgggcggt atgttcggtc tgtatttcgc cgcacacgcg ccgcgaaact atgccgatat
     1501 ggcgcgttcc aatattgacg ctttcaaacg cttcttccac ggtatgctcg accgcggcat
     1561 tgccttcggc ccgtccgctt atgaagcagg tttcgtttct gccgcgcata cgcccgagct
     1621 gattgacgaa acggttgcgg ttgcggttga agtgttcaag gcgatggctg catgatgttt
     1681 tgacggacag agtttctctg ttcgatttgt ttggcagatt gaagtaagaa tgcacaccgc
     1741 cgtcattccc gcgcaggcgg gaatccagac ctttcagttt ctgtaatgat tgaaaataac
     1801 gggccgaaat cagccgcgcc cggcaggaag ccgccgccac ctgaaacaat gccgtctgaa
     1861 gccttcagac ggcattttat cggaagcgca tcagaaaaaa cggatagcga catatgcggt
     1921 aaaagcaagg gcaattacat agataaaccc ctttataaat tcaaaagtct catctatatc
     1981 gctatatttt tctttcagtt cgtcagattt tcgataacgt ttcattttca agaccacttc
     2041 atgaccaaca agcccgacct tccggattcc cgcctgcgcg ggaatgacgg gcgtgtatat
     2101 ttttgatttc aatctgctgt aaaaatgccg tctgaaatgc aggatttgcg cttcagacgg
     2161 cattttttgt ttcttattgc gcttcggctc tcggggcgga aatcagaaag tgttcgcggt
     2221 agtggcgcat ttcttcgatg ctctccaaaa tgtcgtccaa tgccttgtgc gaaccgcgtt
     2281 tgacgacgct tttggcaacg ggcggattcc agcgtttggc aagctctttc agtgtggaaa
     2341 cgtcaaggtt gcggtagtgg aagtagtttt ccagtttcgg catatatttg accataaaac
     2401 gccggtcttg gtggatggaa ttgccgcaca tcggcgtggc gcgtccgggt acccattccg
     2461 acataaagtc cagcagtttc tgttcgactt cggcttcggt atgcgacgat tcgcgcacgc
     2521 gctgcgtcag ccccgtcctg ccgtgtgtgg cggtgttcca ctcgtccata ttgtcgagca
     2581 gctcgtcgct ttggtggacg gcgtaaactt cggattgcgc caatacattc aaatccgagt
     2641 cggtaataat catcgcgact tcgataatgc ggtcggtttc gggattcagc cccgtcattt
     2701 ccatatcgag ccagcagagg ttgtttttgt cctgcacggt gtttcctttt cgtttcagcg
     2761 ttttacgccg ctcaagcgcg cccagccttc ttcggtttcc gccgggtcga ggtcgaacca
     2821 ttggctgtaa atgccgccga gttcttcggc ctgttcgtcc aacaaaccgg acaacacgat
     2881 gcgtccgccc tgtttggtgc gggctgcgag catttcgccg agcatacgca aagggttggc
     2941 gaggatgttg gcgacaacta cgtcgaattg cccttgaggc agaccgtcgg gcaggaagaa
     3001 ttgtgcatcg acgttgtttt gcgcggcgtt gtccctgccg gcgcggacgg cctgttcgtc
     3061 aatatccacg ccgacggcgg aacctgcacc gagtttgagg gcggcgatgg tcaggatgcc
     3121 cgaaccgcag ccgtagtcga ggacgctttc gccgtttttg agttgcgtat ccagccattt
     3181 gaggcagagg cgcgtggtcg ggtggctgcc ggtgccgaag gcgaggccgg gatcgaggcg
     3241 gaggttgacg gcagtgcctt cgggggcttc gtgccaagag ggggtaatcc acaggcgttc
     3301 ggaaatttgg atggggtcga attgcgcttg ggtcaggcgt acccagtctt ggtcttcaag
     3361 ggtttcgccg gtgtatgcca agtcttttaa tccgcattct tgtgcggcgg tttggatgat
     3421 ggcggcggct tcgtcgtgtt cgccgaacag ggcgatgact ttgctctgct gccagatttg
     3481 ttcggcgggc ataccgggtt cgccgaaaat cgcctgttcg ttttgcgtgc cggcgtaggc
     3541 atcttcgatg gcggcggaga gtgcgccgtg ttccatcagc gcgtcggcga ggcgttcggc
     3601 gacggcatcg ttgacgttga cggtgatttg ttggtagggc ataacgggct ttcttaacag
     3661 accttcggaa tagggtcgta ctgtataagg ggatgggtgt gtaacggaaa tgccgtctga
     3721 aaacggacaa actgtttcag acggcatatc ggcggcggtt tacttgtcct gtttggcttt
     3781 gcgatcttcc agccagtgtt ccaaatagtg gatgctgaca ccgccttttt ggaaacccgc
     3841 atcggcgaac aggtcgcggt gaagcggcgt attggttttg atgccggtta ccgccagctc
     3901 ggcgagtgcg acgcgcattt tcgccattgc ctgttcacgc gttttgccgt gtacgcagat
     3961 tttgccgatc aggctgtcgt agtacggtgg gatgcggtag ccttggtaaa tgtggctgtc
     4021 cacgcggata ccgaagccgc cgggcaggtg gcagctttca atcgggcccg ggctggggat
     4081 gaagttgtat gggtcttcgg cgttgatacg gcactcaaac gcgtggcctt cgacttgaat
     4141 atccttttgt ttgtattgca aaggcaggcc ggcggcgatg cggagttgct cctgcacgat
     4201 gtccacgccg gtgatgagct cggtaaccgg atgctcgacc tgaacgcgcg tgttcatctc
     4261 gataaagaaa aattcgccgt cttcgtataa aaactcaaac gtacccgcgc cccggtagcc
     4321 gatgcgtttg caggcatcgg cacaggcgtt gccgattttg gcgcgttctt tttcagtgat
     4381 gaacggagcc ggtgcttcct cgatgacttt ttggtggcgg cgttgcagcg aacagtcgcg
     4441 ctcggcaagg tagatggcgt tgccgtgttc gtcggcaatc acttggattt cgacgtggcg
     4501 cggacgttgc aaatagcgtt ccatgtaaac catcgggttg ccgaatgccg cgcccgcttc
     4561 ggccttggtc atttcgacag attggaggag gtcttctttt ttctcgacca cgcgcatacc
     4621 gcgaccgccg ccgccaccgg aggctttgat aatgacggga taaccgactt tatcggcgat
     4681 tttgaggatt tcttcgccgt cgtcgggcaa tgcgccgtca gaaccgggga cgcagggtac
     4741 gcctgccgct atcatcgcgt gtttggcgga gactttgtcg cccatcaggc ggatggtgtc
     4801 gggtttcggg ccgataaagg taaagccgga ctgctcgacc tgttcggcga aatcggcgtt
     4861 ttcggcaagg aaaccgtagc ccggatggac agcgtccgcg cagcttactt cggcggcggc
     4921 gataatggcg gggacgttaa ggtagctttg cgcggaagcg gcagggccga tgcacacgga
     4981 ttcgtcggcg agtttgacgt gcaggctgtc tttgtcggcc tcggaatgca cggcgacggt
     5041 ggcaatgccc atttcgcggc aggcacggag tacgcgtaat gcgatttcgc ctcggttggc
     5101 gattaaaact tttttcagca tgatgactgt tcctgtggtt ccggcaaccc gtccgtaaaa
     5161 aaaaaggtgc gggaacgccg aagggggaaa gcatttcaga cggcatcgga agtttatgcc
     5221 gtctgaaaac aggattatcc gatgatgaag agcggttcgc cgaattcgac gggcgtaccg
     5281 ttttcgacca gaatttcttt gaccgtgccg gatttttcgg cttcgatttc gttcatcagc
     5341 ttcatcgctt cgatgatgca cagcgtgtcg ccggctttaa cctgttggcc gacttcgaca
     5401 aaaggcgcgg cattcgggcc gggtgcgcgg tagaacgtgc cgaccatagg cgatttttgc
     5461 gcgtcggaca aatcgcgggc ggcaggtgcg gcggcgggcg cggatgccgc aacgggtgcg
     5521 gcggcaggcg ttacggccgg cgcggcggca ggtacgggcg cggcgtaaac gggtgcggcg
     5581 gcgatggttc gggtgatgcg gactttttcc tcgccttcgg ttacttcgat ttcggcgata
     5641 cccgattctt caaccaaatc aatcagtttt tttaatttgc gcaaatccat ttctgttcct
     5701 ttaaaggctg ccggtgttcc ggcgggttgt tgcgttggtt tttcagaaaa cagccggctt
     5761 gcggcaacgg cgcaaaccgg gcggaatggt gttcggatac ggttttcctg tggtggaaaa
     5821 caaccgtgag aatgtgttta ttttcccgaa gttgtcggta aatgtccagt aaaatatcaa
     5881 aaaacggcgg tttttggggg aaatgtgcag gaagtttgat tttgcgcaca agatgttcca
     5941 ggttaagagt gtttattcta atctgttggt ttttcggaca aagatgccgt ctgaaaaagg
     6001 gctaaagtgc gtataatggc ggcttgcccg aacgagagtg taaaaatgga tatttcagat
     6061 tttgatttta ccctgcccga aaagctgatt gcccagcatc cgcccgaagt gcgcggcagc
     6121 agccgccttt tggttgcgtt gcccgatatg ccgctgcaag accgggtgtt cggcgatttg
     6181 ccggattatg tcgaggcggg cgacgttttg gtgttcaaca acaccaaagt catgaaggcg
     6241 cggctgtttg ggcagaaaga cagcggcggc aggatcgaag ccctgattga gcgcgtgttg
     6301 gacaaccata ccgcactggc gcacatccgt tcgtccaagt cccccaagcc cggtatgggg
     6361 ctggtgtttg aaggcggcat ccgtgccgtg atggtcgggc gtgagggcga actgttctgc
     6421 ctgcgttttg aaggcggtca aaccgtttac gaacttttgg aacagaacgg acacctgccc
     6481 ctgccgcctt atatcgaacg cgccgccgac gcggacgacg acagccgtta tcaaaccgtt
     6541 tatgccaaat atcagggtgc ggtcgccgcg ccgacggcgg gtctgcattt tacggaagaa
     6601 cttttgcgcc gcctgaaaga caaaggcgca gtaaccgcag aagtaaccct gcacgtcggt
     6661 gcgggaacgt tccagcccgt gcgtgtggaa aaaatcgaag aacacaaaat gcacagcgaa
     6721 tggtttgaag tgccgtctga aaccgccgcc gccgttgagg cggcaaaagc acgggggaac
     6781 aaagtctggg cggtcggcac gacttccatg cgcgccctcg aatctgccgc gcgtgcgacg
     6841 ggtcgtctga aagcggggca gggcgacacc gatattttca tcacgccggg ctaccgtttt
     6901 aatgttgtcg acaggctggt taccaatttt catttgccga aatcgacgct gctgatgctt
     6961 gtcagcgcgt tttcgggtat gggtcatatc cgcgccgcgt atcgttatgc ggtcgaacgc
     7021 gaataccgtt tcttcagcta cggcgatgcg atggttttgg ggcggaacga aggggtggta
     7081 cgttagaaca gccccaagtc tattggggga agacaagtgc cgtctgaacg gacgttcgga
     7141 cggcattctt ttgttgattt gaatgaaagg aactgtatga catagattca ggcgcgagag
     7201 gcgagaaact cagtcattgt tgatgacgcg caatacgtta aaattcattc cgttttggtc
     7261 gtataaacat attacatacg ccattttttt gtattcaagg ctgcctgaaa acagtgggca
     7321 agaatatcta acccaacgaa aagctgaaaa agcaacaaaa aataatctgc accttagtcg
     7381 gttggttagt ccaaccttag gggtgcagac cattcaatct ttcaggctgc ctttgtttgt
     7441 ttataagata aatttttagc cgaacacttt ttccaagtgt gcctgataat ctgccaagta
     7501 tttttccact tg
//
LOCUS       DBBZXU010000093         7472 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.093, whole genome shotgun sequence.
ACCESSION   DBBZXU010000093 DBBZXU010000000
VERSION     DBBZXU010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7472
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.093"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            140..721
                     /locus_tag="ACJJDE_001685"
     CDS             140..721
                     /locus_tag="ACJJDE_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HGG7541579.1"
                     /translation="MEEKNDYTDAASDNRNGQEIEVGIAGAGDRILAALLNQLFTFLV
                     LLVPFAGLIAFAIKNEGRIGGSEEIFGLLLGMTSFWVGLAGILVYTVVQIYYMSRDGQ
                     SLGKKIMRIRVLKTDGRNPGFVGTVLVREIAWSVLVAIIAAVIGLAVGDNGENAINLL
                     AFLANFVLLFMVKRDRRTLYDILADTVVVKLPK"
     gene            complement(783..1637)
                     /gene="folD"
                     /locus_tag="ACJJDE_001686"
     CDS             complement(783..1637)
                     /gene="folD"
                     /locus_tag="ACJJDE_001686"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HGG7541580.1"
                     /translation="MSAQLINGKEVSQKRLQAVAEAVAQRQQDNLHMPCLAVVLVGGD
                     PASAVYVRNKKTACQKCGIKSLSYELPESTSQEELLALVDRLNADSEVDGILVQLPLP
                     KHLDSQAVLERISPDKDVDGFHPYNVGRLAVKMPLMRPCTPKGVMTLLEAYGIDPKGK
                     KAVVVGASNIVGRPQALELLLARATVTVCHSATENLADEVAGADILVVGVGIPNFVKG
                     EWIKPGAVVIDVGINRLDDGSLCGDVKFETAKERAAMITPVPGGVGPMTIATLMENTL
                     HAASLHDA"
     gene            1860..1937
                     /locus_tag="ACJJDE_001687"
     tRNA            1860..1937
                     /locus_tag="ACJJDE_001687"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1895..1897,aa:Pro,seq:tgg)
     gene            1962..2038
                     /locus_tag="ACJJDE_001688"
     tRNA            1962..2038
                     /locus_tag="ACJJDE_001688"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1996..1998,aa:Arg,seq:tct)
     gene            2066..2141
                     /locus_tag="ACJJDE_001689"
     tRNA            2066..2141
                     /locus_tag="ACJJDE_001689"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2099..2101,aa:His,seq:gtg)
     gene            2277..2783
                     /gene="rfaE2"
                     /locus_tag="ACJJDE_001690"
     CDS             2277..2783
                     /gene="rfaE2"
                     /locus_tag="ACJJDE_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016773 - phosphotransferase activity,
                     alcohol group as acceptor [Evidence IEA];
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HGG7541581.1"
                     /translation="MVDAWSVPDFESKICPPEALAARLALLPRPLVFTNGCFDILHRG
                     HVTYLAQARSMGGALVLALNTDASVRRLGKGGDRPINPLENRAAVAAALESVDLVTWF
                     DEDTPAALIEAVKPEILVKGGDWAADKIVGAAETLARGGQVFSIPFLHQTSTTKTLAK
                     IRAAEGGK"
     gene            2780..4558
                     /locus_tag="ACJJDE_001691"
     CDS             2780..4558
                     /locus_tag="ACJJDE_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/type III pantothenate kinase"
                     /protein_id="HGG7541582.1"
                     /translation="MTVLKPSHWRVLAELADGLPQHVSQLARMADMKPQQLNGFWQQM
                     PAHIRGLLRQHDGYWRLVRPLAVFDAEGLRALGERSGFQTALKHECASSNDEILELAR
                     IAPDKAHKTICVTHLQSKGRGRQGRKWSHRLGECLMFSFGWVFDRPQYELGSLSPVAA
                     VACRRALSRLGLDVQIKWPNDLVVGRDKLGGILIETVRTGGKTVAVVGIGINFVLPKE
                     VENAASVQSLFQTASRRGNADAAVLLETLLVELDAVLLQYARDGFAPFVAEYQAANRD
                     HGKAVLLLRDGETVFEGTVKGVDGQGVLHLETAEGKQTVVSGEISLRSDDRPVSVPKR
                     RDSERFLLLDGGNSRLKWAWVENGTFATVGSAPYRDLSPLGAEWAEKADGNVRIVGCA
                     VCGEFKKAQVQEQLARKIEWLPSSAQALGIRNHYRHPEEHGSDRWFNALGSRRFSRNA
                     CVVVSCGTAVTVDALTDDGHYLGGTIMPGFHLMKESLAVRTANLNRHAGKRYPFPTTT
                     GNAVASGMMDAVCGSVMMMHGRLKEKTGAGKPVDVIITGGGAAKVAEALPPAFLAENT
                     VRVADNLVIHGLLNLIAAEGGESEHT"
     gene            4671..5495
                     /locus_tag="ACJJDE_001692"
     CDS             4671..5495
                     /locus_tag="ACJJDE_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SPOR domain-containing protein"
                     /protein_id="HGG7541583.1"
                     /translation="MKWLFTLLAVLNIAVFGGTVGYKLAVKATGGVPENRAVENTPPA
                     TPAADNAAASVEDTAALLKPGDILTEEQAEQLRLKKEAEQKKLKEKKQREEKARREKL
                     AAEKAQAERENGAADALCAAQASLTMDEDDYHRIKGLLGKWSHVASRSVEKRTAKAKP
                     ADKTYRVVLPVSADAENQAAELSAKGFNPIPFDGALSLGVGNSRENAQALQNRLAGAG
                     FGGAHIVEHFAEADRQDDSLSVSRMTVLFTGVNAADADEIRKITSLYGKLNLKSCK"
     gene            complement(6258..7046)
                     /locus_tag="ACJJDE_001693"
     CDS             complement(6258..7046)
                     /locus_tag="ACJJDE_001693"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990107 - thiazole synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HGG7541584.1"
                     /translation="MLTLYSETFPSRLLLGTAAYPTPEILKQSVRTARPAMITVSLRR
                     AGCGGEAHGQGFWSLLQETGVPVLPNTAGCQSVQEAVTTAQMAREVFETDWIKLELIG
                     DDDTLQPDVFQLVEAAEILIKDGFKVLPYCTEDLIACRRLLDAGCQALMPWAAPIGTG
                     LGAVHAYALNVLRERLPYTPLIIDAGLGLPSQAAQVMEWGFDGVLLNTAVSRSGDPVN
                     MARAFALAVESGRLAFEAGPVEARDKAQASTPTVGQPFWHSAEY"
     gene            complement(7260..7454)
                     /gene="thiS"
                     /locus_tag="ACJJDE_001694"
     CDS             complement(7260..7454)
                     /gene="thiS"
                     /locus_tag="ACJJDE_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007343677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HGG7541585.1"
                     /translation="MNIILNGGPAELHGTTVADLIAQTAPQKPFAVAVNTGFVAKGAY
                     AETVLNENDKIDIVRPVVGG"
BASE COUNT         1591 a         1922 c         2238 g         1721 t
ORIGIN      
        1 atgtatggcg taaaggaagc gttttaacgc cgtattggga aaatgtaaag ttctttatcg
       61 ggatttcttt aagtattggc gttttcggtg tcgtggcggt agaatcgggg tcagttaaga
      121 acaattatca ggaacggata tggaagaaaa aaacgactac accgacgcgg catccgacaa
      181 ccgcaacggg caggaaattg aagtcggaat tgccggcgca ggcgaccgga tacttgccgc
      241 gctgctgaac caattgttta cctttttggt tttgttggtg ccgtttgccg gactgattgc
      301 tttcgccatc aagaatgaag gcaggattgg cggcagtgag gaaatattcg ggctgctttt
      361 gggcatgact tccttttggg taggactggc gggcattttg gtttataccg tcgttcaaat
      421 ctactatatg agtcgggacg ggcagtcatt gggtaagaag atcatgagaa tcagggtgtt
      481 gaaaaccgac ggccgcaatc cgggttttgt cggcacggtt ttggtacgcg aaatcgcatg
      541 gtcggttttg gttgccatta ttgccgccgt tatcggtctt gcagtaggtg acaacggaga
      601 aaacgccatc aacctgctgg cattccttgc caactttgtc ctgctcttta tggtcaaacg
      661 cgaccgccgc acgctttacg acatactggc ggatacggtt gtcgtcaagc tgcccaaata
      721 aacggacacg gcaaaatgcc gtctgaaagc ctttcagacg gcatttttat cttcagaacc
      781 gctcaagcat cgtgcagtga agccgcgtgc agggtgtttt ccatcaatgt ggcaatcgtc
      841 atcggaccca cgccgccggg aacgggcgta atcatcgccg cccgttcttt tgccgtttca
      901 aatttcacgt cgccgcacag gctgccgtcg tccaaacggt tgatgcccac atcgataacg
      961 accgcgccgg gtttgatcca ttcgcctttg acaaagttcg gaatgcccac gccgaccacc
     1021 aaaatatcgg ctccggcaac ctcgtctgcc agattttcgg ttgcgctgtg gcagaccgtt
     1081 accgttgcgc gcgccagcag cagttccaaa gcctgcgggc ggccgacgat attcgacgcg
     1141 ccgaccacga ccgctttttt ccccttcgga tcaatgccgt aagcttccaa aagcgtcatc
     1201 acgcccttgg gcgtacacgg gcgcatcagc ggcattttga ccgccagcct gccgacattg
     1261 taaggatgga agccgtccac gtccttatcc ggcgaaatac gttccaaaac cgcctggctg
     1321 tcgaggtgct tcggcagggg cagctgaacc agaataccgt ccacttcgga atcggcattc
     1381 aggcggtcga ccagtgccag cagttcttcc tgcgatgttg attcgggcag ttcgtaagac
     1441 agtgatttga tgccgcattt ttggcaggca gttttcttgt tgcggacata aaccgcgctg
     1501 gcagggtcgc ctccgaccaa aaccacggcc aggcaaggca tgtgcagatt gtcctgttgg
     1561 cgttgcgcca ccgcttcggc aaccgcctgc aggcgttttt gcgaaacttc tttaccattg
     1621 atcagttgtg ccgacatatc cgtccttttg ttaaacaggt agaaaatgct gaaaattatc
     1681 gcattttccg tttgttttta cagcaggatg ccgaaaataa atttgccctg aaataaaata
     1741 cggctgtttg gacggattaa atattttttc aaatcaaaaa actatatttt tcatcttggt
     1801 gtcttgaaaa taaatattga cgcatctttc cctgagttgt atagttcgct tcttcaagtc
     1861 ggggcgtagc gcagcccggt tagcgcatct gctttgggag cagagggtcg tgagttcgaa
     1921 tcccaccgcc ccgaccaatc aatcagcacg aatcggcatg agcgcccgta gctcaaccgg
     1981 atagagcacc gaccttctaa gtcgggggtt acaggttcga ttcctgtcgg gcgtgccaag
     2041 aatttgattg aaaaccgttt ttatggtggc tgtagctcag ttggtagagc cccggattgt
     2101 gattccggtt gtcgtgggtt cgagccccat cagccacccc agataaaggc ccgtactttt
     2161 cggtacgggt cttttcccgt ttgcgcgtac tgtccgcgcc gccggctttg cctttcgcat
     2221 atgcttctgt atcatgtggg tttttctgtc ttttatggtt tttgtcggag gctttgatgg
     2281 ttgacgcttg gtctgtccct gattttgaat cgaaaatctg tccgcccgag gcgttggcgg
     2341 cgcgtttggc gttgttgccg cgcccgctgg tgtttaccaa cggctgtttc gacatcctcc
     2401 acagggggca cgttacttat ctggcgcagg cgcgttcgat ggggggcgcg ttggtgctgg
     2461 cgttgaatac cgatgcttcg gtgcggcgtt tgggcaaggg cggcgaccgc ccgattaatc
     2521 ctttggagaa ccgtgccgcc gttgccgccg ctttggaaag tgtggatttg gtaacgtggt
     2581 ttgacgagga tacgccggcg gcgttgattg aggcggtcaa acctgagatt ttggtcaagg
     2641 gcggcgattg ggctgcggat aagattgtcg gtgcggcaga aacgttggcg cgcggcggtc
     2701 aggtgttttc aattccgttt ctgcaccaga cttcgacaac gaagactttg gcaaaaatcc
     2761 gtgcggcaga gggcggaaaa tgacggtttt gaagccttcg cactggcggg tgttggcgga
     2821 gcttgccgac ggtttgccgc aacacgtctc gcaactggcg cgtatggcgg atatgaagcc
     2881 gcagcagctc aacggttttt ggcagcagat gccggcgcac atacgcgggc tgttgcgcca
     2941 acacgacggc tattggcggc tggtgcgccc attggcggtt ttcgatgccg aaggtttgcg
     3001 cgcgttgggg gaaaggtcgg gttttcagac ggcattgaag cacgagtgcg cgtccagcaa
     3061 cgacgagata ctggaattgg cgcggattgc gccggacaag gcgcacaaaa ccatatgtgt
     3121 gacccacctg caaagtaagg gcagggggcg gcaggggcgg aagtggtcgc accgtttggg
     3181 cgagtgtctg atgttcagtt ttggctgggt gtttgaccgg ccgcagtatg agttgggttc
     3241 gctgtcgcct gttgcggcag tggcgtgccg gcgcgccttg tcgcgtttag gtttggatgt
     3301 gcagattaag tggcccaatg atttggttgt cggacgcgac aaattgggcg gcattctgat
     3361 tgaaacggtc aggacgggcg gcaaaacggt tgccgtggtc ggtatcggca tcaattttgt
     3421 cctgcccaag gaagtagaaa atgccgcttc cgtgcaatcg ctgtttcaga cggcatcgcg
     3481 gcggggcaat gccgatgccg ccgtgctgct ggaaacgctg ttggtggaac tggacgcggt
     3541 gttgttgcaa tatgcgcggg acggatttgc gccttttgtg gcggaatatc aggctgccaa
     3601 ccgcgaccac ggcaaggcgg tattgctgtt gcgcgacggc gaaaccgtgt tcgaaggcac
     3661 ggttaaaggc gtggacggac aaggcgtttt gcacttggaa acggcagagg gcaaacagac
     3721 ggtcgtcagc ggcgaaatca gcctgcggtc cgacgacagg ccggtttccg tgccgaagcg
     3781 gcgggattcg gaacgttttc tgctgttgga cggcggcaac agccggctca agtgggcgtg
     3841 ggtggaaaac ggcacgttcg caaccgtcgg tagcgcgccg taccgcgatt tgtcgccttt
     3901 gggcgcggag tgggcggaaa aggcggatgg aaatgtccgc atcgtcggtt gcgccgtgtg
     3961 cggagaattc aaaaaggcac aagtgcagga acagctcgcc cgaaaaatcg agtggctgcc
     4021 gtcttccgca caggctttgg gcatacgcaa ccactaccgc caccccgaag aacacggttc
     4081 cgatcgctgg ttcaacgcct tgggcagccg ccgcttcagc cgcaacgcct gcgtcgtcgt
     4141 cagttgcggc acggcggtaa cggttgacgc gctcaccgat gacggacatt atctcggggg
     4201 aaccatcatg cccggtttcc acctgatgaa agaatcgctc gccgtccgaa ccgccaacct
     4261 caaccggcac gccggtaagc gttatccttt cccgaccaca acgggcaatg ccgtcgccag
     4321 cggcatgatg gatgcggttt gcggctcggt tatgatgatg cacgggcgtt tgaaagaaaa
     4381 aaccggggcg ggcaagcctg tcgatgtcat cattaccggc ggcggcgcgg caaaagttgc
     4441 cgaagccctg ccgcctgcat ttttggcgga aaataccgtg cgcgtggcgg acaacctcgt
     4501 cattcacggg ctgctgaacc tgattgccgc cgaaggcggg gaatcggaac atacttaaaa
     4561 aatacaccct ttttcaacac ggggcggtat ccgtccgaat ccgtccggat tctgccgccc
     4621 gacagactgc cgcccaggcg ggcggggttt caaacattga ggaaattcta atgaaatggc
     4681 tcttcaccct tttggcggta ctcaatattg ccgtattcgg cggcacggtg ggctataaat
     4741 tggccgttaa agcgacgggc ggcgtgccgg aaaaccgggc cgtcgaaaac acgccccccg
     4801 caacgcccgc cgccgacaat gcggcggcat ccgtggagga tacggcggca ctgctcaaac
     4861 cgggcgacat cctgaccgaa gaacaggcgg agcagttgcg cttgaagaaa gaagcggaac
     4921 agaaaaaact gaaagagaaa aaacagcgtg aagaaaaagc ccgccgcgaa aaactcgccg
     4981 ccgaaaaggc gcaggcggaa cgcgaaaacg gcgcggcgga tgccttatgc gccgcgcagg
     5041 caagcctcac gatggacgaa gatgactacc accgcatcaa agggcttttg ggcaaatggt
     5101 cgcacgttgc cagcaggagt gttgaaaaac gcaccgccaa agccaaacct gccgacaaaa
     5161 cctaccgcgt cgtcctgccc gtttccgccg atgccgaaaa tcaggcggcg gagctgtctg
     5221 ccaaaggttt caaccccata ccgtttgacg gcgcattgag tttgggtgtc ggcaacagcc
     5281 gggaaaacgc ccaagccctg caaaaccggc ttgccggcgc cggattcggc ggggcgcata
     5341 ttgtcgaaca ctttgccgaa gccgacaggc aggacgattc tttgagcgtg tcgcgtatga
     5401 cggttttgtt taccggcgtg aatgccgccg atgcggacga aattcgtaaa atcacgtccc
     5461 tatacggcaa actgaacctc aagtcttgca aataggcgcg aaagccggac gataaacgcc
     5521 aaacccaccg cgaaggtggg tttggcgttt cggttttgag tatctgatat ataaaaaggg
     5581 aatgtatgtc tcgtatatgc cgactccaag tgtgaaagtg atgatgggga aatatggtgt
     5641 ttaatggttc ggaacggacg acttccgagt ggttttgatt atacgctaat aataataatt
     5701 atcaataaaa atttaaaaat aaatgcagat tttttgtaat acgatgaaaa ataaacaaat
     5761 taaactattt gccgatgttg gtgattcggg tcggcaaact ttcattgtgt cggacaaatc
     5821 ggggtcggca gtcatagctg agggcttcgt gcctgacgga aataaggttg cccgtgtttg
     5881 aacatccgtc cgattgggcg cggacgaggt tgtcattcgg gggtgtttga gcgtggattc
     5941 ggggatgcaa aagcggtaaa accgttgcgg atgaaggctt acggacggct ttaggtattt
     6001 ttaagtgtat tcaaacaaca acaaaacgct tcttctattg ccgtatttag ggcttgcgcg
     6061 gcagcctgca caccgtggag gccgagtgtt tcgttggttg cggcatcggg acgggcggca
     6121 aggttttccg gccggttttt ccattttttc cgacaaagcc gtgatgccgg ggaatggcgg
     6181 tttgtccgtt tcggaccgcc gccgttttga gccgcgatgc cgtctgaagc cttcagacgg
     6241 catttttgcc gcctttttca atattccgcc gaatgccaaa acggctgtcc gactgtcggc
     6301 gtgctggctt gcgctttgtc gcgtgcttcg accggtccgg cttcaaatgc cagccgtccg
     6361 gattcgacgg cgagtgcgaa ggcgcgtgcc atattgactg gatcgccgct gcgggaaacg
     6421 gcggtgttca aaagcacgcc gtcaaagccc cattccatca cttgtgccgc ctgtgagggc
     6481 aaacccaagc ccgcgtcgat aatcagcggc gtgtagggca ggcgttcgcg caggacgttc
     6541 aacgcgtagg cgtgaaccgc gcccaaaccc gtgccgatcg gggccgccca cggcatcaac
     6601 gcctgacagc ccgcgtcgag caggcggcgg caggcaatca ggtcttcggt gcaataaggc
     6661 agcactttga agccgtcttt aatcaggatt tccgccgctt cgacaagctg gaacacatcc
     6721 ggctgcaagg tgtcgtcatc tccgatgagt tccaatttta tccaatcggt ttcaaacact
     6781 tcgcgcgcca tttgcgccgt cgttaccgct tcctgcacgc tttggcagcc tgccgtgttc
     6841 ggcaggacgg gaacgccggt ttcttgaagc agcgaccaaa acccctgacc gtgcgcctcg
     6901 ccgccgcatc ccgcgcggcg cagcgagacg gtaatcatcg cgggccgggc ggttcggacg
     6961 gattgtttga ggatttcagg ggtcgggtag gcggctgtgc cgagcagcag ccgcgaaggg
     7021 aaagtttcgc tgtacagggt gagcataatg ggttcctttg tatagtggat taacaaaaac
     7081 cagtacggcg ttgcctcgtc ttagctcaaa gaaaacgatt ctctaaggtg ctgaagcact
     7141 aagtgaatcg gttccgtact atttgtactg tctgcggctt cgtcgccttg tcctgattta
     7201 aagttaatcc accataacgt tgttttgggg acaggggtcg tctgaaaagg caaaaccgcc
     7261 tagccgccga ccaccggccg cacgatatcg attttgtcgt tttcgtttaa aacggtttcc
     7321 gcatacgcgc ctttggcgac aaatccggta ttcaccgcta cggcaaaagg cttttgcggc
     7381 gcggtttggg cgatgaggtc ggcaacggtc gtgccgtgaa gttcggcggg tccgccgttt
     7441 aagatgatgt tcatggtttc tcgatgtttc tg
//
LOCUS       DBBZXU010000094         7468 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.094, whole genome shotgun sequence.
ACCESSION   DBBZXU010000094 DBBZXU010000000
VERSION     DBBZXU010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.094"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(100..459)
                     /gene="rnpB"
                     /locus_tag="ACJJDE_001695"
     ncRNA           complement(100..459)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="ACJJDE_001695"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(538..1641)
                     /gene="prfB"
                     /locus_tag="ACJJDE_001696"
     CDS             complement(538..1641)
                     /gene="prfB"
                     /locus_tag="ACJJDE_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HGG7541586.1"
                     /translation="MEAEVINQLNNTLNDLEKRSEDIRVYMDYQGKKDRLEEVVGLSE
                     DPELWNDPKRAQEIGKERKILEGIVLTLDNIATGIEDNRMLIEMTVEENDEEGFAAVQ
                     EDVAGLEKQMADLEFKRMFNQPADPNNCFIDITAGAGGTEAEDWAGMLFRMYSRYAER
                     KGFKIEILEEDDGEIAGINRATIRVEGEYAYGLLRTETGVHRLVRYSPFDSNNKRHTS
                     FASVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGIVVQC
                     QNDRSQHANKAAAMEMLKSKLYELEMRKRNEEKQALEEGKSDVGWGSQIRSYVLDSSR
                     IKDLRTGYEVGNTKAVLDGDLDGFIEASLKQGV"
     gene            complement(1744..2637)
                     /locus_tag="ACJJDE_001697"
     CDS             complement(1744..2637)
                     /locus_tag="ACJJDE_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HGG7541587.1"
                     /translation="MVTFSKIRPLLAIAAAALLAACGTAGNNAARKPVQTAKPAAVVG
                     LALGGGASKGFAHVGIIKVLKENGIPVKVVTGTSAGSIVGSLFASGMSPDRLELEAEI
                     LGKTDLVDLTLSTSGFIKGEKLQNYINRKVGGRRIQQFPIKFAAVATDFETGKAVAFN
                     QGNAGQAVRASAAIPNVFQPVIIGRHTYVDGGLSQPVPVSAARRQGANFVIAVDISAR
                     PGKNISQGFFSYFDQTLNVMSVSALQNELGQADVVIKPQVLDLGAVGGFDQKKRAIRL
                     GEEAARAALPEIKRKLAAYRY"
     gene            2979..3428
                     /locus_tag="ACJJDE_001698"
     CDS             2979..3428
                     /locus_tag="ACJJDE_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HGG7541588.1"
                     /translation="MKIGTTWQTASAMLVLRLFAAYEFLESGLQKWNGENWFSEINDQ
                     FPFPFNLLPDALNWNLAMYAELLLPVLLLLGLATRLSALGLMVVTAVAWAAVHAGSGY
                     NVCDNGYKMALIYIVVLIPLLFQGAGGWSLDTLLKKRFCPQCRLKQD"
     gene            3502..3810
                     /locus_tag="ACJJDE_001699"
     CDS             3502..3810
                     /locus_tag="ACJJDE_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541589.1"
                     /translation="MNKNIAAALAGALSLSLAAGAVAANKPASNATGVHKSAHGSCGA
                     SKSAEGSCGAAGSKAGEGKCGEGKCGATVKKTHKHTKASKAKAKSAEGKCGEGKCGSK
                     "
     gene            3926..4768
                     /locus_tag="ACJJDE_001700"
     CDS             3926..4768
                     /locus_tag="ACJJDE_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HGG7541590.1"
                     /translation="MIQHAGLGYRRDLAEDFLSLSENSPICFIEAAPENWLKMGGWAR
                     KQFDRVAERLPLALHGLSMSLGGQAPLDTDLIDGIKEMMRRYDCTFFSDHLSYCHDGG
                     HLYDLLPLPFTEEMVHHTARRIREVQDRLGCRIAVENTSYYLHSPLAEMNEVEFLNAV
                     AREADCGIHLDVNNIYVNAVNHGLLSPEAFLKNVDADRVCYIHIAGHDVETPELLIDT
                     HGAAVLPTVWDLLELAYAKLPTIPPTLLERDFNFPPFAELEAEVAKIADYQTRAGKEC
                     RRAA"
     gene            4758..5504
                     /locus_tag="ACJJDE_001701"
     CDS             4758..5504
                     /locus_tag="ACJJDE_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2063 domain-containing protein"
                     /protein_id="HGG7541591.1"
                     /translation="MQPETSAQYQHRFAQAIRGGEAADGLPQDRLNVYIRLIRNNIHS
                     FIDRCYTETRQYFDSEEWSRLKEGFVRDAHAQTPYFQEIPGEFLQYCQSLPLSDGILA
                     LMDFEYTQLLAEVAQIPDIPDIHYSNHSKYTPSPAAFIRQYRYDVTDDLQEAETALLI
                     WRNAEDDVMYQTLDGFDMMLLEIMGSSALSFDTLAQTLVEFMPEDDNWKNILLGKWSG
                     WTEQRIIIPSLSAISENMEGNSPGQNHLSA"
     gene            5526..6113
                     /locus_tag="ACJJDE_001702"
     CDS             5526..6113
                     /locus_tag="ACJJDE_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HGG7541592.1"
                     /translation="MPLPDLTDAELIESRKLLLHFARLQLPDHPDLAEDLVQETLLSA
                     YSAGDSFQGRALVNSWLFAILKNKIIDALRQIGRQRKVFTTLDDELLDEAFESHFSQN
                     GHWTQEGQPQHWNTPEKSLNNNEFQKILQSCLYNLPENTARVFTLKEILGFSSDEIQQ
                     MCGISTSNYHTIMHRARESLRQCLQIKWFNQENPK"
     gene            6119..6298
                     /locus_tag="ACJJDE_001703"
     CDS             6119..6298
                     /locus_tag="ACJJDE_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003692066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zf-HC2 domain-containing protein"
                     /protein_id="HGG7541593.1"
                     /translation="MKKCRDIALLLSKHQDRETTPGEKISIYTHLLFCPYCREYKRQL
                     QTIKRSLAKTTRTSK"
     gene            6539..6979
                     /locus_tag="ACJJDE_001704"
     CDS             6539..6979
                     /locus_tag="ACJJDE_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-adhesin E family protein"
                     /protein_id="HGG7541594.1"
                     /translation="MIKETLMRPIFLSFVLLPILITACSTPDKSARWENIGTISNGNI
                     HTYINKDSVRKNGNLMIFQDKKVVTNLKQERFANTPAYKTAIAEWEIHCNNKTYRLSS
                     LQLFDTKNTEISTQSYTASSLRPMSILSGTLTEKQYETVCGKKL"
BASE COUNT         1919 a         1982 c         1684 g         1883 t
ORIGIN      
        1 ccgtaccggt ttttgttaat ccactataaa aacacaacct aaataaaaat gccgtctgaa
       61 ccatatttca ggtttcagac ggcatttgcg tgtcggatgc acaccggacg ggcggtaagc
      121 cgggttctgt ctcggacagt cattcctcta ggcataccgt taccggtatg ctcaagcaac
      181 ctacccgaac gctcggcggg cagcgtcatt gcgttctgtt tggtcttgct ccgaatgggg
      241 tttggcctgc cgcatattgt taccaaatgc gcggtgcgcc cttaccgcac cttttcaccc
      301 ttgcctgtgc tgccaaagca gccatcggcg gttttgcttt ctgttccact ttccgtcgcg
      361 ttaccgcgcc cggccgttaa ccggcattct accctgcgga gcccggactt tcctccccgt
      421 atgccttacg cgatacgcgg cgactgtctg cccgtcccgt gtgcggcgcg gattataaca
      481 cgaaacgcaa aaatgccgtc tgaaacggta caggtttcag acggcatacg gttcaaacta
      541 cacgccctgt ttcaggctgg cttcgataaa gccgtccaaa tcgccatcca atacggcttt
      601 ggtgttgccg acttcgtagc ctgtacgcaa gtctttgata cgtgaggaat ccaaaacata
      661 cgaacggatt tggctgcccc aacctacatc ggatttacct tcttccaacg cctgtttctc
      721 ttcgttgcgt ttgcgcattt ccaattcata cagtttggat ttcaacattt ccatcgcggc
      781 cgctttgttg gcgtgttgcg aacggtcgtt ttgacattgc accacaatcc ccgtcggctc
      841 gtgggtaata cgcacggcgg agtcggtttt gttgatgtgc tgaccgcccg cgcccgatgc
      901 gcgataggtg tcgatacgca aatcggcggg gttgatttcg atttcaatgg aatcatcgat
      961 ttcagggtaa acgaacacgg aggcaaacga agtatggcgt ttgttgttcg agtcaaacgg
     1021 tgaatagcgc accaagcggt gaacgccggt ttcggtacgc agcaaaccat aggcgtattc
     1081 gccttccact cggatagtcg cgcggttgat gcccgcgatt tcgccgtcgt cttcttcgag
     1141 gatttcgatt ttgaagcctt tgcgctcggc gtagcggctg tacatacgga acagcatacc
     1201 cgcccagtct tccgcttccg taccgcccgc gcctgcggtg atgtcgataa agcagttgtt
     1261 cgggtcggcg ggctggttga acatccgttt gaactccaaa tccgccatct gtttttccag
     1321 ccccgccaca tcttcctgca cggcggcaaa accttcttcg tcgttttctt cgacggtcat
     1381 ttcaatcagc atgcggttgt cttcgatgcc cgtcgcgatg ttgtcgagcg tcaacacgat
     1441 gccttcgagg attttgcgct ctttgccgat ttcttgggcg cgtttcgggt cgttccaaag
     1501 ttcggggtct tcggaaagac cgacaacttc ttccaatcgg tctttcttgc cctgataatc
     1561 catataaacg cggatgtctt cgctgcgctt ttccaaatca ttcagggtat tgttgagctg
     1621 gttgattact tcggcttcca tgattctttt gttctttcaa aattttaggg gcgtattgta
     1681 cgggattcgg gtattttttt ctatggataa agccttctgg aaacacgttc ggacggcata
     1741 gcgtcaataa cggtatgccg ccagtttgcg tttgatttca ggcaatgcgg cacgtgctgc
     1801 ctcctcaccc aaccggatgg cgcgtttttt ctgatcgaat ccgccgactg cacccaaatc
     1861 caaaacctgc ggtttgataa ccacatccgc ctgccccaac tcattttgca acgcggaaac
     1921 gctcattacg ttcagcgtct gatcgaaata agagaagaaa ccttggctga tgtttttgcc
     1981 cggacgggcg gaaatatcga cggcaatcac gaaattcgcc ccctgccgcc gggcggcact
     2041 gacgggcacg ggctgcgaca gaccgccgtc aacatatgta tgcctgccga tgataacggg
     2101 ttggaacaca ttgggaatgg cggcggaagc gcgcacagcc tgcccggcat tcccttgatt
     2161 gaaagcgacg gccttgccgg tttcaaaatc agtagcaaca gcggcaaatt tgatgggaaa
     2221 ctgctgaatc cgcctgccgc cgacttttcg gttgatgtaa ttttgcagct tttcgccttt
     2281 gataaaacca ctggtggaca aggttaaatc gactaaatcg gttttgccta aaatttcggc
     2341 ttccaattcg aggcggtcgg gcgacatacc cgatgcaaaa aggctgccga ctatcgaacc
     2401 tgccgatgtg ccggtaacca ccttcacagg aataccattt tctttcaaaa ccttaataat
     2461 gcctacatgg gcaaatcctt tagatgcgcc gccaccgagt gccaaaccga ccactgcggc
     2521 gggtttggcg gtttgcaccg gcttgcgggc agcattattt cccgccgtgc cgcaggcggc
     2581 aagcaacgcg gcggcggcga ttgccaaaag cggtctgatt tttgaaaacg ttaccatatt
     2641 ttccattcct ttatatatcg caccccgtca aaaagaggga ttgcttttct taacaacccc
     2701 ctttgacagc caagcaaatg ggggctttgt taagtcatca tcaaaattaa tatttctttt
     2761 tttcctttac ggaaattata tttgaaggca tactatccaa ggcgggaatt atctcacaac
     2821 accgccgtta tccaaatatc ccgccttttt cccttccttt ccatcaaaat actttctttt
     2881 tatattcatt aacttgttaa atcattggct gccgggtgtc agtttttccg acaaaatccg
     2941 tctaatgggg tatcaacaga accaaaacag gaacacttat gaaaatcgga acaacttggc
     3001 agacggcatc cgctatgctg gttttgcgtc tgtttgccgc atatgaattt ttggaatcgg
     3061 gtttgcaaaa atggaacggg gagaattggt tttctgaaat caacgatcaa ttcccattcc
     3121 cgttcaactt gctgccggac gcgttaaact ggaatctcgc catgtatgcg gagcttttgc
     3181 tgcccgtact gttgcttttg ggtttggcaa cgcgtctgtc ggcattaggg ctgatggtcg
     3241 ttaccgccgt cgcttgggct gcggttcacg ccggttcggg ttacaatgtc tgcgacaacg
     3301 gttataaaat ggctttaatt tatatcgtgg tattaatccc gctgcttttc cagggtgcgg
     3361 gcggatggtc gctggatacg ctgctgaaaa aacggttttg cccccaatgc cgtctgaagc
     3421 aagattgatt cagtcgtgga atctgacttt aaacattcca accttatctc gttaacttga
     3481 tattctgaaa aggaaataga aatgaacaaa aacattgctg ccgcactcgc cggtgcttta
     3541 tccctgtctt tggccgccgg tgcagttgct gccaacaaac cggcaagcaa cgcaacaggc
     3601 gttcataaat ccgcccatgg ctcttgcggc gcgtccaaat ctgccgaagg ttcgtgcggc
     3661 gcggctggtt ctaaagcagg cgaaggcaaa tgcggcgagg gcaaatgcgg tgcgaccgta
     3721 aaaaaaaccc acaaacacac caaagcatct aaagccaagg ccaaatctgc cgaaggcaaa
     3781 tgcggcgaag gcaaatgcgg ttctaaataa tcccacccct tcaaaccaag ccgcgttttt
     3841 cagtaaaatg cggctttttt aacggcaaac aaagattttt taacaagcac atcattcttt
     3901 tgtgccatcc gaaccgggta aaaatatgat tcaacacgca ggcttgggct accgccgcga
     3961 cttggcggaa gactttctct cgctttccga aaacagcccg atatgcttta tcgaagccgc
     4021 accggaaaac tggctgaaaa tgggcggctg ggcgcgcaaa cagtttgacc gtgtggcgga
     4081 acggctgccg ctggcgttgc acggattgtc tatgtcgctg ggcgggcaag caccgctgga
     4141 tactgatttg atagacggca tcaaagaaat gatgcgccgt tacgattgca cgtttttctc
     4201 cgaccatttg agctactgcc acgacggcgg tcatctttac gatttgttgc cgctgccctt
     4261 caccgaggaa atggtgcatc atacggcgcg gcgtatccgt gaagtgcaag accgtttggg
     4321 ctgccgcatc gccgtggaaa acacgtccta ctatctgcat tccccgcttg ccgagatgaa
     4381 cgaggtcgag ttcctcaacg ccgtcgcacg tgaggccgat tgcggcattc atctggatgt
     4441 gaacaatatc tacgtcaacg ccgtcaatca cggcctgttg tcgccggagg cttttttgaa
     4501 aaacgttgac gcagatcgcg tgtgctatat ccatattgcc ggacatgacg tggaaacgcc
     4561 ggaattgttg attgatacac atggcgcggc agttttgccg actgtttggg acttgctcga
     4621 acttgcctat gccaagctgc cgacgattcc gcccaccctg ttggaacgcg attttaattt
     4681 cccgcctttt gccgaactcg aagccgaagt cgccaaaatc gccgattatc aaacgcgtgc
     4741 cggaaaggaa tgccgccgtg cagcctgaaa cctccgccca ataccagcac cgtttcgccc
     4801 aagccatacg cgggggcgaa gccgcagacg gtctgccgca agaccgactg aacgtctata
     4861 tccgcctgat acgcaacaat atccacagct ttatcgaccg ctgctatacc gaaacgcggc
     4921 aatactttga cagcgaagaa tggagccgtc tgaaagaagg tttcgtccgc gacgcgcacg
     4981 cccaaacgcc ctattttcaa gaaatccccg gcgagttcct acaatattgc caaagcctgc
     5041 cgctttcaga cggcattttg gcactgatgg attttgaata tacccaatta ctggcagaag
     5101 ttgcacaaat tccggatatt cccgacattc attattcaaa tcacagcaaa tacacgccct
     5161 cccctgcggc ctttatccgg caatatcgat atgatgttac cgatgatttg caggaagcgg
     5221 aaacagcctt gttaatatgg cgaaacgccg aagatgatgt gatgtaccaa acattggacg
     5281 gcttcgatat gatgctgctg gagataatgg gttcctccgc gctttcgttt gacaccctcg
     5341 cccaaaccct tgtcgaattt atgcctgagg acgataattg gaaaaatatt ttgcttggga
     5401 aatggtcagg ctggactgaa caaaggatta tcatcccctc cttgtccgcc atatccgaaa
     5461 atatggaagg caattccccg ggccaaaacc atctatccgc ataaaattac cttgttcccg
     5521 atactatgcc gctacccgac ctgaccgatg ccgaattaat agagtcgcgt aaactgcttc
     5581 tgcattttgc gcggcttcag ttgcccgacc accctgattt ggctgaagat ttagtgcagg
     5641 aaacattgct gtccgcatac agcgcaggcg acagttttca aggcagggca cttgtcaaca
     5701 gctggctttt tgccatattg aaaaacaaaa ttattgacgc attacgtcaa atcggaaggc
     5761 agaggaaagt ctttaccaca ctggatgacg agctactgga tgaagcattt gaaagccatt
     5821 tttcccaaaa cgggcattgg acgcaggaag ggcagccgca acattggaac actccggaaa
     5881 aatcattaaa caacaacgaa ttccaaaaaa ttctgcaaag ctgcctatac aacctgcctg
     5941 aaaacaccgc acgggtattt accctgaagg aaatactcgg tttttcatcc gacgaaatac
     6001 aacaaatgtg cggtatcagc acgtccaact accacaccat tatgcaccgc gcccgagaat
     6061 cattgcgcca atgcctgcaa atcaaatggt tcaaccaaga aaacccgaag taaacgttat
     6121 gaaaaaatgc cgcgatatcg ccctgcttct ttccaaacat caggaccggg aaaccacccc
     6181 gggcgagaag atttccatat acacacacct gctgttctgt ccgtattgcc gtgaatataa
     6241 aagacaactt caaaccatca aaagatcact ggcaaaaaca accagaactt caaaataaat
     6301 gccgtctgaa aaggcttcag acggcataag ctgacggaaa caaatcaaac cgatttactg
     6361 ttatctgcag ttcatccata atacacactt caaaagcagc atatttcccc atacggaatg
     6421 tataaatacg caaaatacga aggctgcatc aatttgccat atttgcttta tttgccttat
     6481 ttcacagacg acactccccc tcccgcccaa cccgttcttt ctgaatgagc agatttcaat
     6541 gattaaggaa accctaatgc gcccaatctt cctatctttc gttttactcc ctattttgat
     6601 aaccgcctgc agcacaccgg acaagtctgc ccgatgggaa aatatcggca caatctcaaa
     6661 cggcaatatt catacatata tcaacaaaga cagcgtgaga aaaaacggaa atctgatgat
     6721 tttccaagat aaaaaagttg tgaccaatct aaaacaagaa cgttttgcca acacccccgc
     6781 atacaagact gccattgccg agtgggaaat ccactgcaac aacaaaacat accgcttaag
     6841 ttcgctacag ttgtttgata caaaaaacac ggaaatttcc acacaaagct acacagcctc
     6901 ttccctccgc ccgatgagca tcctgtccgg aacattaact gaaaaacaat atgaaaccgt
     6961 atgcgggaaa aaactctgat tacaacttat gcacaaactt atccataaac cttattataa
     7021 aaatgccgtc tgaaatactg aaatatcagc atttcggacg gcattttgcc atttccccga
     7081 aaagttaccc ccaaagttat ccacattatt ttttaaacca gcttccatcc gaaatatagt
     7141 ggattaacaa aaatcaagac aaggcgacga agccgcagac agtacaaata gtacgaaacc
     7201 gattcacttg gtgcttgagc accttagaga atcgttctct ttgagctaag gcgaggtaac
     7261 gccgtactgg tttttgttaa tccactataa actcgctata caatttcact atccaaacgt
     7321 aaattgttcc attgatacac aaaactgctt gcccccataa ttttgataaa gcatttctta
     7381 cattcccggc tccgtcccgt aaccaacaca gcctctaaaa aataatcgct tgttttgaca
     7441 ccgatacact catatagtgg attaacaa
//
LOCUS       DBBZXU010000095         7452 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.095, whole genome shotgun sequence.
ACCESSION   DBBZXU010000095 DBBZXU010000000
VERSION     DBBZXU010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7452
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.095"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(205..2808)
                     /gene="pepN"
                     /locus_tag="ACJJDE_001705"
     CDS             complement(205..2808)
                     /gene="pepN"
                     /locus_tag="ACJJDE_001705"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016688050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HGG7541595.1"
                     /translation="MSKTVRYLKDYQTPAYRILETDLHFDIAEPQTVVKSRLTVEPQR
                     VGEPLVLDGSAKLLFVKINGAAADYVLEGEMLTIAGVPSERFTVEVETEILPAENKSL
                     MGLYASGGNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIVADKKRYPVLLSNGNKIDG
                     GECSDGRHWVKWEDPFAKPSYLFALVAGDLAVTEDRFTTMSGRNVKIEFYTTEADKPK
                     VGFAVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADS
                     RTATDTDFEGIESVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRA
                     VRRIENIRLLRQHQFPEDAGPTAHPVRPASYEEMNNFYTMTVYEKGAEVVRMYHTLLG
                     EEGFQKGMKLYFQRHDGQAVTCDDFRATMADANGINLDQFALWYSQAGTPVLEAEGRL
                     KNNVFELTIKQTVPPTPDMADKQPMMIPVKIGLLNRNGEAVAFDYQGKRATEAVLLLA
                     EAEQTFPLEGVTEAVVPSLLRGFSAPVHLNYPYSDDDLLLLLAHDSDAFTRWEAAQTL
                     YRRAVAANLAALSDGVELPKHEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWDGA
                     ENIDPLRYHQAREALLDTLAVRFLPKWHELNRQAAKQENQSYEYSPEAAGWRTLRNVC
                     RAFVLCADPAHIETVAEKYGEMAQNMTHEWGILSAVNGNESDTRNRLLAQFADKFSDD
                     ALVMDKYFALVGSSRRSDTLQQVQTALQHPKFSLENPNKARSLIGSFSRNVPHFHAED
                     GSGYRFIADKVIEIDRFNPQVAARLVQAFNLCNKLEPHRKNLVKQALQRIRAQEGLSK
                     DVGEIVGKILD"
     gene            complement(3020..3814)
                     /locus_tag="ACJJDE_001706"
     CDS             complement(3020..3814)
                     /locus_tag="ACJJDE_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002252744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HGG7541596.1"
                     /translation="MNTILAFDIETVPDVQGIRTLYELPSSLPDDEVVLFAQQKRRAQ
                     TGGDFMQHHLHQIVAISCCMRWGQDKVHVGTIGEMDDGEEVVIAKFFELIEKHTPQLV
                     SWNGGGFDLPVLHYRSLIYGINAARYWDMGDGDFGDSRDFKWNNYISRYHQRHCDLMD
                     LLALYQPRANVPLDDMAKLCGFPGKLGMDGSKVWDAFHAGRLKEIRNYCETDAVNTYL
                     MYLRFCLVSGRFDADEYEMEIKRIRNYLSAQTEDKPHWSEFAQAWK"
     gene            complement(3931..4065)
                     /locus_tag="ACJJDE_001707"
     CDS             complement(3931..4065)
                     /locus_tag="ACJJDE_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541597.1"
                     /translation="MPSERIFRSILRLVGVSSETVKQKFAGVELSYAGKAAGESLYCL
                     "
     gene            complement(4565..5434)
                     /locus_tag="ACJJDE_001708"
     CDS             complement(4565..5434)
                     /locus_tag="ACJJDE_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HGG7541598.1"
                     /translation="MKFIFFVLYVLQFLPFALLHKLADLTGLLAYLLVKPRRRIGEIN
                     LAKCFPEWSEEKRKTVLKQHFKHMAKLMLEYGLYWYAPAGRLKSLVRYRNKHYLDDAL
                     AAGEKVIILYPHFTAFEMAVYALNQDVPLISMYSHQKNKILDAQILKGRNRYDNVFLI
                     GRTEGLRALVKQFRKSSAPFLYLPDQDFGRNDSVFVDFFGIRTATITGLSRIAALANA
                     KVIPAIPVREADNTVTLQFYPAWKSFPGEDAQADAQRMNRFIEERVREHPEQYFWLHK
                     RFKTRPEGSPDFY"
     gene            complement(5485..6021)
                     /gene="ruvC"
                     /locus_tag="ACJJDE_001709"
     CDS             complement(5485..6021)
                     /gene="ruvC"
                     /locus_tag="ACJJDE_001709"
                     /EC_number="3.1.21.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HGG7541599.1"
                     /translation="MSATVRILGIDPGSRVTGFGIIDVRGRDHFYVASGCIKTPADAS
                     LADRIAVIVRHIGEVVAVYKPQQAAVEQVFVNVNPASTLMLGQARGAALAALVSHKLP
                     VSEYTALQVKQAVVGKGKAAKEQVQHMVVQMLGLSGTPQADAADGLAVALTHALRNHG
                     LAAKLNPSGMQVKRGRFQ"
     gene            complement(6024..6263)
                     /locus_tag="ACJJDE_001710"
     CDS             complement(6024..6263)
                     /locus_tag="ACJJDE_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fis family transcriptional regulator"
                     /protein_id="HGG7541600.1"
                     /translation="MPHTLPDISQCIRQNLEQYFKDLNGTEPCGVYDMVLHQVEKPLL
                     VCVMEQCGGNQSKASVMLGLNRNTLRKKLIQHGLL"
     gene            complement(6294..7304)
                     /gene="dusB"
                     /locus_tag="ACJJDE_001711"
     CDS             complement(6294..7304)
                     /gene="dusB"
                     /locus_tag="ACJJDE_001711"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HGG7541601.1"
                     /translation="MHIGGYFIDNPIALAPMAGITDKPFRRLCRDFGAGWAVCEMLTS
                     DPTLRNTKKTLHRSDFADEGGIVAVQIAGSDPQQMADAARYNVSLGAQVIDINMGCPA
                     KKVCNAQAGSALMQNEPLVAAILEAVVRAVDVPVTLKTRLGWHDDHKNLPAVARIAED
                     CGIAALAVHGRTRTQMYKGEAAYDLIAETKCRLNIPVWVNGDITSPQKAQAVLKQTAA
                     DGIMIGRGAQGRPWFFRDLKHYAEHGVLPPALSLAECSAAILNHVRAMHAFYGETAGV
                     RIARKHIGWYIDEMPDGEQTRREINRLDSAAAQYDMLAGYLERLAGKTDRWACAYRQN
                     AV"
BASE COUNT         1671 a         1969 c         1961 g         1851 t
ORIGIN      
        1 acaaaaacca gtacagcgtt gcctcgcctt accgtactat ctgtactgtc tgcggctttg
       61 tcgccttgtc ctgatttttg ttaatccact ataattaata tgactttgcg gccgttttgc
      121 cattgcgtaa taaaacgatg gggaagtgat gataaaacgt gtgtgtaact atatcagacg
      181 gcattgtttt tctgtttgac ggcctcaatc caaaattttg ccgacgattt cgcccacgtc
      241 tttcgacaat ccttcctgcg cccgaatgcg ctgcaatgct tgtttcacca agtttttgcg
      301 gtgcggctcg agcttgttgc agaggttgaa cgcctgcacc aggcgggcgg cgacctgcgg
      361 gttaaagcgg tcgatttcga tgactttgtc ggcgatgaag cggtagccgc tgccgtcttc
      421 tgcgtggaaa tgcgggacgt tgcggctgaa gctgccgatg agcgagcggg ctttgttggg
      481 attttcgagg ctgaacttcg gatgctgcaa ggcggtttga acctgttgca gggtgtcgct
      541 gcggcggctt gagccgacga gggcgaaata tttgtccatc accagcgcgt cgtctgaaaa
      601 cttgtcggca aactgagcca gcaggcggtt gcgcgtatcg ctttcgttgc cgttaacggc
      661 ggacaggatg ccccattcgt gggtcatgtt ttgcgccatt tcgccgtatt tttcggcaac
      721 ggtttcgatg tgcgcggggt cggcgcacag gacgaaggcg cggcagacgt tgcgcagcgt
      781 gcgccagccg gcagcttcgg ggctgtactc gtagctttgg ttttcctgct tcgccgcctg
      841 acggttcaat tcgtgccatt tcggcaggaa gcggacggca agcgtatcca acaaggcttc
      901 gcgcgcctga tggtagcgca gcgggtcgat gttttctgcg ccgtcccaca gttcggcttc
      961 agacggaacg cccaaaagca gggctttgaa ggcgttgtcc aagaggtcgt ctgaaatgac
     1021 tttttcgacg gcggcaagca gtttttcatg tttcggcaac tcgacgccgt ctgaaagcgc
     1081 ggcaaggttg gcggcgacgg cgcggcggta gagcgtttgc gcggcttccc agcgcgtgaa
     1141 ggcgtcgctg tcgtgggcaa gcaggagcag caggtcatcg tcgctgtacg gatagttcag
     1201 atgcactggc gcactgaacc cgcgcagcag cgagggaacg acggcttcgg ttacgccttc
     1261 gagcgggaag gtctgttcgg cttcggccag cagcaacacg gcttcggtcg cgcgtttgcc
     1321 ctgataatca aatgccaccg cttcgccgtt gcggttcagc agcccgattt tgacgggaat
     1381 catcatcggc tgcttgtccg ccatatcggg cgtgggcggc acggtttgtt taatggtcaa
     1441 ctcgaaaaca ttgtttttca gacgaccttc cgcttccaaa acgggcgtgc ccgcctggct
     1501 gtaccacaag gcgaactggt cgagattaat gccgttcgcg tccgccattg tcgcgcggaa
     1561 atcgtcgcag gtcacggctt gcccgtcgtg gcgttggaaa tagagcttca tgcctttttg
     1621 gaagccctct tcgccgagca gggtgtgata catccgcacc acttccgcgc ctttttcata
     1681 aacggtcatg gtgtagaaat tgttcatctc ctcatagctg gcggggcgca ccggatgggc
     1741 ggtcgggcct gcgtcttcgg ggaactggtg ctggcgcagc aggcggatgt tctcgatgcg
     1801 gcgcacggcg cggctggcgc ggtcgccgga aaattcttgg tcgcggaaca cggtcagccc
     1861 ttccttcagt gaaagctgga accagtcgcg gcaggtaacg cggttgcccg tccagttgtg
     1921 gaaatattcg tgtccgatca cggattcgat gccttcaaaa tcggtatcgg tggcggttcg
     1981 gctgtcggca aggacgaact tggtgttaaa gatgttcaaa cccttgtttt ccatcgcacc
     2041 catattgaaa tcgcctacgg cgacgaccat gaaaatatcc aagtcgtatt ccaagccgaa
     2101 gcgcgtttcg tcccacttca tcgcgttttt caaggattcc acggcaaagc cgaccttggg
     2161 cttgtccgct tcggtggtgt aaaactcgat tttgacgttt ctgccgctca tggtggtgaa
     2221 acggtcttcc gttaccgcca aatcgcccgc gaccaaagca aacaaatagc tcggtttggc
     2281 aaacgggtct tcccatttca cccaatggcg gccgtctgaa cactcgccgc cgtcgatttt
     2341 gttgccgttg gagagcaaaa cgggatagcg ttttttgtcc gcaacgatgg tggtcgtgaa
     2401 tttggacatc acatccggac ggtcgatgta gaacgtgatt ttgcggaagc cctccggctc
     2461 gcattgggta aacagattgc caccggaagc atacagcccc atcagcgatt tgttttccgc
     2521 cggcaggatc tcggtttcca cttcgacggt gaagcgttcg gacggcacgc ctgcaatcgt
     2581 cagcatctcg ccttccaaca cataatccgc tgccgcccca ttgattttga cgaacaagag
     2641 tttcgccgaa ccgtccaaca ccagcggctc tcctaccctc tgcggctcga ccgtcaaacg
     2701 tgatttcacg acggtttgcg gttcggcaat gtcaaaatgc aggtcggttt caaggatgcg
     2761 gtaggcaggc gtttggtaat ctttcagata acggacggtt ttgctcattt ttttctttca
     2821 atattgtttg gtttgactgg aaaaggcttc agacagcacg gatacagctt ttaaagcgga
     2881 ttaacaaaaa tcaggacaag gcgacgaagc cacagacagt acagatagta cgggctgtac
     2941 cggtttgaat ttaatccacc atatgccgtc tgaaaccgaa acggcggcac aagcgtaccg
     3001 ccttcggaca gcaggttttc tatttccacg cttgggcaaa ttctgaccaa tgcggtttat
     3061 cttctgtttg ggcggaaaga tagtttctga tccgcttgat ttccatttcg tattcgtccg
     3121 cgtcgaatct gccgctgacc agacaaaaac gcagatacat caaatacgta ttcacggcat
     3181 cggtttcgca ataattgcgg atttctttca gcctgcccgc gtggaacgca tcccacacct
     3241 tgctgccgtc catacccagc ttgcccggaa aaccgcacag tttcgccata tcgtccagcg
     3301 gcacgtttgc cctcggctgg taaagcgcga gcaaatccat caaatcgcag tggcgttggt
     3361 gataacggct gatgtagttg ttccacttga aatcgcggct gtcgccgaaa tcgccgtcgc
     3421 ccatatccca atagcgcgcg gcgttaatgc cgtatatcag ggagcggtaa tgcagaaccg
     3481 gcaggtcgaa accgccgccg ttccaactga ccagttgcgg cgtatgtttt tcaatcaact
     3541 cgaaaaattt ggcaatcacg acttcttcgc catcgtccat ctcgccgatg gtgccgacat
     3601 ggactttatc ctgcccccaa cgcatgcagc acgaaatcgc cacaatctga tgaagatgat
     3661 gctgcataaa atccccaccc gtctgagcac ggcgtttttg ctgggcaaac agcaccactt
     3721 catcgtcggg cagcgaggac ggcagctcgt acaatgttcg gataccctgc acatcgggta
     3781 cggtttcaat atcgaaagcc aaaatcgtat tcatggcagt accttgcatt caaaaacaga
     3841 cttgcgccta ttgtgtcatt aaaaggcgga taaaaaaaga ggcaaccccc cacaggattg
     3901 ccccaatacc tcaaatcaga gatttacgct tcacaaacaa tacaggcttt cgcctgcggc
     3961 tttgcccgcg tagctcaact ctacgccggc aaacttttgt ttcaccgttt ccgatgaaac
     4021 cccgaccaat cgcaagattg accggaaaat cctttcagac ggcatttcct gcctgtcgtg
     4081 taattccatg tagcgaaatg tacgccattt tctacgcttt gccaagcatt ttttacaata
     4141 taaatgtcaa aacattaatt ttataaaatt gctgaaaata ttaaatatat gaatttttat
     4201 tttaaatatt ttaataaata taaatttaat tttgatttat atttaaattt aagcataaaa
     4261 tgttaaatat taaaggcaat atgaaaggca tatattaaat atttatttat aacgctatgt
     4321 ttttaaagaa aattaatttt aatatattaa ctagattgtc tgcagatatt catgggtttg
     4381 cggtatttct tccaaaacct gcttcgaatt ttccgaccaa gtcttaaaaa tattgttttt
     4441 tgagatactt aaatagcagc gattatcaaa tgaaatctgt tcatataatc tgccatttcg
     4501 catttaaaaa aacaaacagg agtttcgact cgaaacgcct gatatgtttt gtaattttac
     4561 gtagtcagta aaaatcgggg ctgccttccg gacgggtttt aaaacgcttg tgcagccaaa
     4621 aatattgttc tggatgttcg cgcacccgct cttcgataaa gcggttcata cgctgcgcat
     4681 cggcttgcgc gtcttcaccc ggaaaggatt tccaagccgg gtagaattgc aatgtaaccg
     4741 tattgtccgc ctcgcggaca gggatggcgg gtatcacttt tgcatttgca agcgcggcaa
     4801 tgcggctcaa tccggtaatc gttgccgtcc gaataccgaa gaaatccaca aaaaccgaat
     4861 cgttgcgtcc gaaatcctga tcgggcagat acagaaacgg cgcgctgctt ttgcggaact
     4921 gtttgacgag ggcgcgcagc ccttcggtgc gcccgataag gaagacgttg tcgtagcggt
     4981 tgcggccttt caaaatctgt gcgtccaata tcttgttttt ttggtgggaa tacatactaa
     5041 ttagcgggac atcctgatta agcgcgtaca ccgccatctc gaacgcggta aagtgcggat
     5101 acaggatgat gactttttcc cccgccgcca gcgcgtcgtc caaataatgc ttattgcggt
     5161 agcgcaccag cgatttcaaa cgcccggcgg gcgcgtacca atataagccg tattcgagca
     5221 tcagtttcgc catatgtttg aaatgctgtt tcaacacggt tttacgcttt tcctcactcc
     5281 attcgggaaa acatttcgcc aaattgattt cgccgatacg gcggcggggt ttgaccaaaa
     5341 ggtaggcaag caaacccgtc agatcggcaa gtttgtgcag cagcgcaaac ggcagaaact
     5401 gcaaaacata cagtacaaaa aatataaatt tcatctcgat acacattttc ttttcagacg
     5461 gcaaaataca aatgccgtct gaaactattg aaacctgccg cgcttgacct gcatccccga
     5521 aggattgagt ttggcggcaa gcccgtggtt gcgtaaggcg tgggtcagcg cgacggcaag
     5581 accgtccgcc gcatccgcct gcggcgttcc cgaaagcccc agcatctgca ccaccatatg
     5641 ctgcacctgt tctttcgccg ccttgccttt gccgactacc gcctgtttga cctgcaaggc
     5701 cgtgtattcc gaaacgggca gcttatggct gaccaatgcc gccaatgccg cgcccctagc
     5761 ctgacccagc atcagcgtcg atgcaggatt gacgttgacg aacacctgtt ccactgccgc
     5821 ctgttgaggc ttgtaaacgg caacgacttc gccgatatgc cgcacaatca cggcaatcct
     5881 gtctgccaga gacgcatcgg caggcgtttt gatgcagccg gaggcaacat aaaaatgatc
     5941 ccgccccctg acatcgatga tgccgaaacc cgttacgcgg ctgcccgggt caatgcccaa
     6001 gatacggacg gttgccgaca tattcacaac aaaccgtgtt gaatcagttt tttacgcaag
     6061 gtattgcggt tcagccccag catcacggag gctttggact ggttgccgcc gcattgctcc
     6121 atcacgcaca ccagcagcgg tttttccacc tgatgcaaga ccatatcgta cacgccgcaa
     6181 ggttcggtac cgttcaggtc tttgaaatat tgttccaaat tttgtctgat acattgggaa
     6241 atatcgggaa gggtatgggg cataatcgcg ctttcaaaag gataatcggg tgttcagacg
     6301 gcattttggc ggtaggcgca cgcccaacgg tcggtttttc cggcaagtct ttcaagataa
     6361 cctgcaagca tgtcgtattg cgccgccgca ctgtccaagc ggttgatttc acgacgtgtc
     6421 tgttcgccgt cgggcatttc gtcgatgtac cagcctatgt gtttgcgtgc aatgcgcaca
     6481 ccggcggtct caccataaaa cgcgtgcatg gcgcggacgt ggttcaaaat ggcggcactg
     6541 cattctgcca aactcaaggc aggcggtaaa acaccgtgtt cggcgtaatg tttcaaatcg
     6601 cggaagaacc acggtctgcc ttgcgcgccg cgccctatca tgatgccgtc tgcggcggtt
     6661 tgtttaagga cggcttgggc tttttgcggc gaagtaatgt cgccgttgac ccaaaccggg
     6721 atgttcagac ggcatttggt ttcggcaatc aggtcgtaag ccgcttcacc tttgtacatt
     6781 tgcgtgcgag tgcgtccgtg gacggcaagg gcggcaatgc cgcaatcttc ggcgatgcgg
     6841 gcgacggcag gcaggttttt gtggtcgtcg tgccagccca aacgggtttt gagggtaacg
     6901 ggtacgtcca ccgcacggac gacggcttcg agaatggcgg caaccagcgg ctcgttctgc
     6961 atcagcgcgc tgccggcttg ggcattgcac actttcttgg cgggacagcc catgttgatg
     7021 tcgataacct gcgccccaag gctgacgttg taacgcgcgg catccgccat ctgctgcgga
     7081 tcgctgccgg caatctgcac ggcaacgatg ccgccttcat cggcaaaatc gctgcggtgc
     7141 agggtctttt tggtatttct aagtgtcggg tcgctggtca gcatttcgca caccgcccaa
     7201 cccgcgccga aatcgcggca gaggcggcgg aagggtttgt cggtaatgcc cgccatcggt
     7261 gcaagtgcga tggggttgtc gataaaatag ccgccgatgt gcataatgga tccgcgtttc
     7321 aaaaaagtgc gccattgtac attttttaag caggatttcc aatctccgga cgcgcccgcg
     7381 attggggcgg acaccgtttt atggcataat ccgcacacag attccctgcc ccgccactca
     7441 caggcgggca gt
//
LOCUS       DBBZXU010000096         7343 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.096, whole genome shotgun sequence.
ACCESSION   DBBZXU010000096 DBBZXU010000000
VERSION     DBBZXU010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.096"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            217..429
                     /locus_tag="ACJJDE_001712"
     CDS             217..429
                     /locus_tag="ACJJDE_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heavy-metal-associated domain-containing
                     protein"
                     /protein_id="HGG7541602.1"
                     /translation="METLILDIGGMSCGGCVKSVTRILEGVKGVASVEVSLENKSATV
                     GYDPAQTDAGALIEAVEDGGYDAALK"
     gene            577..2160
                     /locus_tag="ACJJDE_001713"
     CDS             577..2160
                     /locus_tag="ACJJDE_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase regulatory domain-containing
                     protein"
                     /protein_id="HGG7541603.1"
                     /translation="MPNKKKKAAFARAATENGVPDVSNIKNSYDDLMYESKAFSQTAI
                     NALEARARMMGLQPAPAANAKVLELGCSMGGNIITQALYYPDAEFVGIDLSGRQVAQG
                     NAIIEKMGLKNVRLEEKDILTVDESFGKFDYIIVHGIWSWVPDAVKDKIFSICRNNLT
                     EHGIAYISYNVYPGWKRQEQLREIMYFAGRDVLEEPLEARTRKGLDALKALAEILEND
                     KGLDGGGKLPAIQKILNHNFYYIAHEYMEAFNDPIYVNGFIEWANRHRLAYIGDADLH
                     ASFVSWMAEHTRERILALAGGDYIAKEFYSDILSDRQFRRSLLCREEVGDTVRRDESV
                     AVEVIESLNFRPARGETINFDENDTLLSGIRDVMKTGEPFKTEDVAENLARRFPGLTF
                     DRMKINSQLLLQTILGRFSVSSDNAGKQFFEDHKTYVPARFTDYAAAFVEHGAEAFVR
                     PANRYNESTPSFGYGHLYIMRQLSRPTSKQALIETVAENLNIVSTTPDGLTFHPPAEV
                     YVEEILADLADRHFLVSAD"
     gene            2242..3339
                     /locus_tag="ACJJDE_001714"
     CDS             2242..3339
                     /locus_tag="ACJJDE_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein"
                     /protein_id="HGG7541604.1"
                     /translation="MNQTFTLPDTRPYPQNPIKNHLLLNAYQLAHNSSQASRKLSSGQ
                     LQTEIRGMLEQNHYINLSLALTMSPDAGTYAALLSSVNAVLDCEKEGEVQWFALPVVL
                     VSGCKKERAIEMKLPTEALFACLQNYPHLRALTQETQWLPYLVHSSDLSAVAPDEWWR
                     AKQNTEAAAQHLRRFAPRPLLLPEGQSVHVVYALGFGSGKVQTALGQNLLQAGLPLMQ
                     VWQENLASEGVTLFANPLSPDSPVRALSDGSHTRQRMAMDVFAANAIRAVRMQSPRVG
                     VVAAAKAGGQVLFGFNATDGAFEVVPQVFSWQLSFTDNIAVIQQNFLDLMAECRVEHV
                     YLLHNPLGEQESIPSYAEALKREGHNPFFSA"
     gene            3453..4568
                     /locus_tag="ACJJDE_001715"
     CDS             3453..4568
                     /locus_tag="ACJJDE_001715"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HGG7541605.1"
                     /translation="MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDG
                     GEGTVDAIRHSLDLEEKCLQVTGPFGQKEVMRYFQKEQLALFEVADLVGLGKIPLEKR
                     NPLQIQTRGIGELIRHLISQEIKEIYIGVGGTASNDGGIGIAAGLGYQFYDEDGNTLP
                     VCGQSLLNLASVSTENRYEIPEDVHIRILADVVSPLCGHQGATYTFGKQKGLDSTMFE
                     AVDQAIQDFYEKVSPATLKLKGAGAGGGIAGGLCAFAQASIVSGIDTCLDLIDFDKKV
                     SDVDLVIIGEGRLDRQSLAGKAPIGVAKRTPVGVPVVAICGSLVEDLPSLPFENIQAA
                     FSILEKSEPLEDSLKNASLYLEHTASNIGHLLNMPKI"
     gene            4693..5148
                     /locus_tag="ACJJDE_001716"
     CDS             4693..5148
                     /locus_tag="ACJJDE_001716"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase"
                     /protein_id="HGG7541606.1"
                     /translation="MKKPKILFVCLGNICRSPMAEYILRRRAAEAGIPLEADSAGTSG
                     WHDGEDMHRETAKILKKHGIDASGFTSRKICQSDAAAFDCIIAMDGKNLSELERTFGR
                     RPEKIFKLTDLIPESGYDHVPDPWYTGDFEETFRLADAGCRALLEKISK"
     gene            5219..5695
                     /locus_tag="ACJJDE_001717"
     CDS             5219..5695
                     /locus_tag="ACJJDE_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HGG7541607.1"
                     /translation="MKTNFKQKIIEQARSEGLQVTALREQVLDIVLQQSGVIKAYNVL
                     SQMQQQSEGVLAPPTAYRALDFWAEQGVLHKVAAVNGYILCSHAQHECDDHCHDHEEA
                     EAHHSAFILVCTECGTADEQTLSHEWAALRAGVAESGFALKEEHVVLTGICKKCQK"
     gene            5683..6609
                     /locus_tag="ACJJDE_001718"
     CDS             5683..6609
                     /locus_tag="ACJJDE_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HGG7541608.1"
                     /translation="MSEVKKTKVHLISGFLGTGKTTALKSLMAQKDPNEKWVIIVNEF
                     GEIGIDGAVLSDNGIPVAEIAGGCLCCTAGPQMGVTVQKMLRDAKPDRLMIEASGLAH
                     AASVIDELKAKPLDSLLEIGAVFTVVNPRQFINPDYAQQALYKDQIGICDVLVASKTD
                     LCTTEQLAEFHDKAAKLFPPKAKVVEVQNAQLDIRWLDIPVIEKSRYRLKALPDNTMG
                     FQSQGFTFPAGRDFDGEKLTNFFNDLPKMTEGLVRAKGVFQVLGTWVWLNWVDGQWGA
                     NQVSWRRDSRFELIAKSFDADLIEQKLKDALE"
     gene            6674..7231
                     /locus_tag="ACJJDE_001719"
     CDS             6674..7231
                     /locus_tag="ACJJDE_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7541609.1"
                     /translation="MKPKFKTVLTALLLAVSLPSMAATHVLMETDMGNIRLVLDESKA
                     PKTVANFVRYARKGFYDDTVFHRVIDGFVIQGGGFTEDLVQKATDKAVANESGNGLKN
                     TAGTIAMARTADPDSATSQFFINLADNASLDYKNGQYGYTVFGRVESGMDTVSKIARV
                     KTATRGFYQNVPVQPVKIRRVVVGQ"
BASE COUNT         1922 a         1810 c         1912 g         1699 t
ORIGIN      
        1 tgttaatcca ctataaatgc gccgattgcc aaggcgatga tgctcaacca gggtttttgc
       61 gaagcgttca ttgttgtcgt cctgatggga attgccgcca ttatgcgcaa gcgtccgtct
      121 ttttccaaac cgccgcaccg tttccgcgtt tgcccaagtt cacgccccga cttacaataa
      181 cgcccgtcag attgcagttc caacgaaagg aaaatgatgg aaacccttat cctcgacatc
      241 ggcggcatga gctgcggcgg ctgcgtcaaa agcgttaccc ggatattgga aggcgtaaaa
      301 ggcgtggcaa gcgtcgaagt cagtcttgaa aacaaaagtg cgaccgtcgg atacgacccc
      361 gcgcaaaccg atgcaggggc gttgattgaa gccgttgaag acggcggcta tgatgccgcg
      421 ttgaaataaa gcggcaaaaa tgccgtctga agccttcgcg cctcccagat gccgtctgaa
      481 gtacgctccg cgccttcaga tggcatttga tttagttgaa cgggtaggat gaattggtta
      541 aacttgcggg caatagtgcc ttcagacaaa caaaatatgc cgaacaaaaa gaaaaaagcc
      601 gcctttgcgc gtgctgcaac ggagaacggt gtgccggacg tgtccaacat caaaaattca
      661 tatgatgatt tgatgtatga atccaaagca ttttcccaaa ccgccatcaa cgccttggag
      721 gctcgcgccc gcatgatggg tttgcagccc gcgcccgccg ccaatgccaa ggtcttggag
      781 ctgggctgtt cgatgggcgg caacatcatc acgcaggctc tttattaccc ggatgcggaa
      841 tttgtcggta tcgacttgtc cggcaggcag gttgcgcagg gcaacgccat cattgaaaaa
      901 atgggcttga aaaatgtgcg tctggaagaa aaagatattt tgaccgtcga tgagtcattc
      961 gggaagtttg actatatcat cgtccacggc atttggtcgt gggtgcctga cgcagttaaa
     1021 gacaaaattt tttcgatttg ccggaacaac ttgaccgaac acggcattgc ctatatttca
     1081 tacaatgttt accccggctg gaaacggcag gagcagttgc gcgaaattat gtactttgcc
     1141 ggcagggatg tgcttgaaga acccttggaa gcacggacgc ggaaaggctt ggacgcgctc
     1201 aaggcgctgg cggaaatttt agaaaacgac aagggcttgg acggcggcgg caaacttccg
     1261 gcgattcaaa aaatattgaa tcataatttt tattacatcg cacacgaata tatggaggcg
     1321 tttaacgacc cgatttacgt caacggcttc atcgaatggg caaaccgcca ccggctggcg
     1381 tatatcgggg atgccgattt gcacgcgtct tttgtttctt ggatggcgga gcatacgcgg
     1441 gagcggattc tggcattggc agggggcgat tatattgcca aagaatttta cagcgatatt
     1501 ttatccgacc gccaattccg ccgttcgctt ttatgccgtg aggaagtcgg ggatactgtc
     1561 aggcgtgacg agtcggttgc cgtcgaagtg atagaaagtt tgaatttccg cccggcaaga
     1621 ggggaaacaa tcaactttga tgaaaacgat accctgcttt cgggcatacg cgatgtgatg
     1681 aaaaccggag agccgtttaa aacggaagat gttgcggaaa atctcgcccg ccgatttccc
     1741 ggtttgacat tcgaccgtat gaaaatcaat tcccagcttt tattgcaaac cattctcggg
     1801 cgtttttctg tttcatcaga caatgcgggc aaacaatttt ttgaagacca taaaacctat
     1861 gtgccggcgc gttttacaga ttatgccgcc gcctttgtgg aacacggcgc ggaagcgttt
     1921 gtccggcctg ccaaccgtta caacgaaagc accccctcat tcggatatgg gcatttgtac
     1981 attatgcggc aattgtcgcg gccgacgagc aaacaggcat tgattgaaac ggttgccgaa
     2041 aacttgaaca tcgtcagcac cacgcccgac ggtttgacat tccatccgcc tgccgaagtg
     2101 tatgtggaag aaatattggc agacttggca gacaggcatt ttctcgtttc ggcggattga
     2161 cgggcaagtc ccgacggcaa tccgtccgat atattttcaa acaggaaaaa cacacactac
     2221 gaaaagcggt acacgacaca tatgaaccag acatttacct tgcccgatac gcgcccgtat
     2281 ccccaaaatc cgattaagaa ccacctgctg ctcaatgcct accagttggc gcataattct
     2341 tcccaggctt cgcgcaaact ctcgtccggc caacttcaaa ccgaaatcag ggggatgctt
     2401 gagcaaaacc actatatcaa cctttccctc gcgttgacga tgtcgcccga tgccggaact
     2461 tatgccgcgc tgctttccag tgtgaacgcg gtactcgatt gcgagaaaga aggcgaagtg
     2521 cagtggttcg ccctgccggt cgtgctggtg tccggctgca agaaagaacg ggcaatcgag
     2581 atgaagctgc cgacggaggc attgtttgcc tgcctgcaaa actatccgca cctgcgcgcg
     2641 ttgacgcaag agacacaatg gctgccttat cttgtgcatt cgtccgattt gagtgcggtc
     2701 gcgccggatg agtggtggcg tgccaaacaa aataccgaag cggcggcgca acacttacgc
     2761 cgtttcgccc cgcgcccttt gctgttgccc gaagggcagt ccgtccacgt cgtttacgcg
     2821 ctgggtttcg gcagcggcaa ggttcagacg gcattgggtc agaaccttct tcaggcaggc
     2881 ctgcccttaa tgcaggtatg gcaggaaaat cttgcatcgg aaggtgttac gctgtttgcc
     2941 aatccacttt ccccggattc tccggtacgc gcgctttcag acggcagcca cacgcgccag
     3001 cgtatggcga tggatgtttt tgcggcaaac gcgatacgcg ccgtccgtat gcagagtccg
     3061 cgcgtcggcg tggtcgctgc ggcaaaggcg ggcggacagg ttttattcgg gtttaatgcg
     3121 accgacggcg cgtttgaagt cgtgccgcag gtgttttcgt ggcagctttc ctttaccgac
     3181 aacatcgccg tcatccagca aaatttcctc gacctgatgg cggagtgccg cgtggaacac
     3241 gtttacctgt tgcacaatcc cttgggcgaa caggaaagca tcccgagcta tgcggaagca
     3301 ttgaaacggg aagggcacaa tccgtttttc agcgcatagt gatttgtagt agtgataggc
     3361 tttctcattt atataataaa tcaaaataaa gagcacaaca ctttttcatt ctgtgttgtg
     3421 ccttgagtga aacgaaagga tgaattataa atatgaagat tgtaattgca ccggattcgt
     3481 ttaaggaaag cttgacagct caacaggtag ctgaagcaat aaaaagaggc ttccaacaat
     3541 cgatagcaga tgtggaatgt ctcctctgtc ctgtcggtga tgggggagaa ggcactgtag
     3601 atgctatccg acattctctt gacctagaag aaaaatgtct tcaagtgaca ggaccttttg
     3661 gacaaaaaga agtcatgcgc tattttcaaa aagaacaact agccctattc gaagttgctg
     3721 atttggttgg tcttggaaaa atcccgctag agaaacgaaa tccattacaa atccaaactc
     3781 gtggtattgg agaattgatt cgccacctca ttagtcaaga aattaaagaa atctatattg
     3841 gcgttggcgg tacggccagt aatgatggag gtattgggat tgctgctggt ttaggttatc
     3901 aattttatga tgaggatgga aataccttac ccgtttgcgg tcaatcctta ctaaacctag
     3961 cttctgtttc aacagaaaat cgctatgaaa ttcctgaaga tgttcacatt cgtattttag
     4021 cagatgttgt gagtccctta tgtggacacc aaggtgcgac ctatacgttt ggcaagcaaa
     4081 aagggttgga ttctactatg tttgaggccg tagatcaggc aatacaagat ttttatgaaa
     4141 aagtctcccc tgcaacatta aaacttaaag gagcaggagc tggtggaggc atcgctggtg
     4201 gtttgtgcgc ctttgctcag gcaagtatcg tatctggaat tgacacctgc ctggacttga
     4261 ttgactttga taagaaagtg tcagatgttg acttggttat cattggtgaa ggaagactag
     4321 atcgtcaaag tttagcaggg aaagcgccta ttggtgtagc aaaaagaacc cctgtcggag
     4381 ttcctgttgt cgctatttgt ggcagtctcg ttgaagattt gccttccctg ccatttgaaa
     4441 atatccaagc tgccttttct attttggaga aaagtgaacc tttagaagat agtttgaaaa
     4501 atgccagtct ctatttggag catacggctt ctaatattgg acacttatta aatatgccta
     4561 agatttagcc aaaccatttc ttccagatgg atgttttggc tggttctgcc ttatgcggtt
     4621 acgattaacc gaccgatgcc gtctgaaagg gtttccgctt cagacggcat cgcgccggaa
     4681 cagggagggg atatgaaaaa accgaaaatc ctttttgtct gcctcggcaa catctgccgt
     4741 tcgccgatgg cggaatacat tttgcgccgc cgcgccgccg aagcgggcat tccccttgaa
     4801 gcggacagcg cggggacatc gggctggcac gacggcgaag atatgcaccg cgagacggca
     4861 aagatattga aaaaacacgg tatcgatgct tcaggcttta ccagccgcaa aatctgccaa
     4921 agcgatgcgg cggcgtttga ctgcatcatc gcgatggacg gcaagaattt gtccgaattg
     4981 gaaagaacct tcggcaggcg gccggaaaaa atattcaagc tgaccgacct gatacccgaa
     5041 agcggttacg accatgtccc cgatccgtgg tatacgggcg attttgaaga aaccttcagg
     5101 cttgcggatg cgggctgtcg ggcattgttg gaaaagattt ccaaataaag caattgaata
     5161 caaatataaa accgcctcct gccgtatcgg ttgttcagac ggcataaaca gagaatttat
     5221 gaaaacaaat ttcaaacaga aaattatcga acaggcacgc agcgaaggct tgcaggtaac
     5281 cgctttgcgc gagcaggtat tagatattgt cttgcagcaa agcggcgtga ttaaagccta
     5341 caacgtcttg tcgcagatgc agcagcaaag cgagggcgtg cttgcgccgc cgaccgccta
     5401 ccgcgccctt gatttttggg cggagcaggg cgttttgcac aaagtggcgg cggtcaacgg
     5461 ctatattttg tgcagccacg cgcagcacga gtgcgacgac cattgccacg accacgaaga
     5521 agccgaagcg caccacagcg cgtttatttt ggtctgcacc gaatgcggca cggcggacga
     5581 gcaaaccctc agccacgagt gggcggcact gcgcgcaggc gttgccgaaa gcggctttgc
     5641 gctgaaagaa gaacacgttg ttttaactgg gatttgtaaa aaatgtcaga agtgaaaaaa
     5701 accaaagtcc acctgatttc aggttttctg ggaacaggca aaaccactgc gctcaaaagc
     5761 ctgatggcgc aaaaagaccc gaacgaaaaa tgggtcatca tcgtcaacga gttcggcgaa
     5821 atcggcattg acggcgcggt attgagcgac aacggtatcc ctgtggcaga aatcgccggc
     5881 ggctgtttgt gttgcaccgc cggcccgcaa atgggcgtaa ccgtgcagaa aatgctgcgc
     5941 gacgccaagc ccgaccgcct gatgattgaa gcaagcggac tggctcacgc agccagcgtc
     6001 atcgacgaac tcaaagccaa accgctggac agccttttgg aaatcggcgc cgtctttacc
     6061 gtcgtcaatc cgcgccagtt catcaacccc gattacgcgc aacaggcgtt gtataaagac
     6121 caaatcggca tctgcgacgt attggtcgcc agcaaaaccg atttatgcac caccgaacag
     6181 cttgccgaat ttcacgacaa agcggcaaaa ctgttcccgc ccaaagccaa agtggtcgaa
     6241 gtccaaaacg cacaactcga catccggtgg ctcgatattc ccgtcatcga aaaatcacgc
     6301 taccgcctca aagccctgcc ggacaacacc atgggcttcc agtcgcaagg tttcacattc
     6361 cccgccggac gcgatttcga cggcgaaaag ctgaccaact ttttcaacga cctgcccaaa
     6421 atgaccgaag gactcgtccg cgccaaaggc gtgtttcaag tattgggaac gtgggtgtgg
     6481 ctcaactggg tagacggaca gtggggcgcg aaccaagtct catggcggcg cgattcgcgt
     6541 tttgaattga ttgccaaatc gtttgatgcg gatttaatcg aacaaaaact taaagatgca
     6601 ttggaatagc gttaacgcgc tttcagacgg catatgaaat gaaaatgccg tctgaaggtc
     6661 tgaggaggat gggatgaaac ccaaatttaa aaccgtttta accgcgctgc ttttggcggt
     6721 ttccctgccg tctatggcgg caacccatgt tttgatggaa accgatatgg gcaatatccg
     6781 tttggttttg gacgagtcca aagcccccaa aaccgttgct aatttcgtgc gctatgcccg
     6841 aaaaggcttt tacgacgaca ccgtttttca ccgcgttatc gacggtttcg ttatccaagg
     6901 cggcggattt accgaagact tggtacaaaa ggcaaccgat aaagccgttg ccaacgaatc
     6961 cggcaacggc ttgaaaaaca ccgccggcac catcgccatg gcgcggacgg cagaccccga
     7021 ttccgccacc agccaattct ttatcaatct cgcggacaac gcttcgctcg actacaaaaa
     7081 cggacaatac ggctataccg ttttcggcag ggtcgaaagc ggaatggaca cagtttccaa
     7141 aatcgcccgc gtcaaaaccg ccacgcgcgg cttttatcaa aatgtacccg tacagcccgt
     7201 caaaatccgt cgcgttgttg tcggacagta acacgcagac agacgttcag acggcgtcgc
     7261 ccgtttcaca aaaaacgccg tctgaagtga aaaaatattt taaaacagac agttgatatt
     7321 gacaaattca aaccgaggat ttt
//
LOCUS       DBBZXU010000097         7240 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.097, whole genome shotgun sequence.
ACCESSION   DBBZXU010000097 DBBZXU010000000
VERSION     DBBZXU010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7240)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7240)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7240
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.097"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(62..817)
                     /locus_tag="ACJJDE_001720"
     CDS             complement(62..817)
                     /locus_tag="ACJJDE_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HGG7541610.1"
                     /translation="MKFARLLFLCAALAGTQAAAAEMVQIEGGSYRPLYLKKDTGLIK
                     VKPFKLDKYPVTNAEFAEFVNSHPQWQKGRIGSKQAEPAYLKHWMKNGSRSYAPKAGE
                     LKQPVTNVSWFAANAYCAAQGKRLPTIDEWEFAGLASATQKNGSNEPGYNRTILDWYA
                     DGGRKGLHDVGKGRPNYWGVYDMHGLIWEWTEDFNSSLLSSGNANAQMFCSGASIGSS
                     DSSNYAAFLRYGIRTSLQSKYVLHNLGFRCTSR"
     gene            complement(997..2156)
                     /gene="nirK"
                     /locus_tag="ACJJDE_001721"
                     /pseudo
     CDS             complement(997..2156)
                     /gene="nirK"
                     /locus_tag="ACJJDE_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003714409.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0050421 - nitrite reductase (NO-forming)
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper-containing nitrite reductase"
     gene            2536..4791
                     /locus_tag="ACJJDE_001722"
     CDS             2536..4791
                     /locus_tag="ACJJDE_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric-oxide reductase large subunit"
                     /protein_id="HGG7541611.1"
                     /translation="MGQYKKLWYLLFAVLAVCFTILGYMGSEVYKKAPPYPEQVVSAS
                     GKVLMTKDDILAGQSAWQSTGGMEVGSILGHGAYQAPDWTADWLHRELSAWLDLTAQQ
                     TYGKKFDEVSPEEQAVLKTRLADEYRNQSRIKEDGSVVISDTRVKAIESILPYYHGVY
                     GDDPALQTTREHFAMKNNTLPSQEAREKLFDFFFWTSWSASTNRPDETFTYTNNWPHE
                     PLINNVPTTENYMWSFTSVVLLLMGIGLLMWGYSFLTKHEEVEVPSEDPISKIQLTPS
                     QKALGKYVFLTVALFVVQVLLGGLTAHYTVEGQGFYGIDEALGFEMSDWFPYALTRTW
                     HIQSAIFWIATGFLTAGLFLAPIVNGGKDPKFQRAGVNFLYIALFIVVGGSYAGNFFA
                     LTHILPPEFNFWFGHQGYEYLDLGRFWQLLLMVGLLLWLFLMLRCTVSAFKEKGVDKN
                     LLAIFVASMVGVGVFYAPGLFYGEKSPIAVMEYWRWWVVHLWVEGFFEVFATAAFAFV
                     FYNMGFVRRSTATASTLAAAAIFMLGGVPGTLHHLYFSGSTSASMAIGACFSALEVVP
                     LVLLGREAYEHWSYQHLSDWAKRLRWPLMCFVAVAFWNMIGAGVFGFLINPPISLFYI
                     QGLNTSAVHAHAALFGVYGFLALGFVLLVARYLKPNVQFDDKLMTWGFWLLNGGLVGM
                     IAISLLPVGVIQAYASITHGLWYARSEEFLQMEILDTLRWVRTAADLIFIGGAICVAI
                     QATKIVFGRDK"
     gene            4970..5503
                     /locus_tag="ACJJDE_001723"
     CDS             4970..5503
                     /locus_tag="ACJJDE_001723"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004602 - glutathione peroxidase activity
                     [Evidence IEA];
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HGG7541612.1"
                     /translation="MGIYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQYEAL
                     QKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANT
                     APLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGDIKWNFTKFLVNRDGEVVERF
                     APSVTPEEIEADIRALL"
     gene            complement(5566..6750)
                     /locus_tag="ACJJDE_001724"
     CDS             complement(5566..6750)
                     /locus_tag="ACJJDE_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HGG7541613.1"
                     /translation="MTEPTSRRRFLKTCTAAAGAGLLQACGTSATSVPPLPSSHSVVK
                     ARTVPLQTPRRQSSDGNLLRVVASSGFAEDTNRVNTALTRLYNAGFTVTNQQAGSRRF
                     QRFAGTDAQRVADFQEVASGRVATPKVLMGLRGGYGAARILPHIDFASLGARMREHGT
                     LFFGFSDVCAVQLALLAKGNMMSFAGPMAYSDFGKPAPGAFTMDAFIKGATQNRLTVD
                     VPYIQRADVETEGILWGGNLSVLASLAGTPYMPDIDGGILFLEDVGEQPYRIERMLNT
                     LYLSGILKKQRAIVFGNFRMEKIRDVYDPSYDFSAVANHVSRTAKIPVLTGFPFGHIA
                     DKITFPLGAHARIRMNGNSGYSVAFEGYPTLDASALTLDTLLPPPDLPIFPESGVADI
                     SE"
     gene            complement(6790..7194)
                     /locus_tag="ACJJDE_001725"
     CDS             complement(6790..7194)
                     /locus_tag="ACJJDE_001725"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HGG7541614.1"
                     /translation="MTAQPCPICTAQDEDILLQTPKLRVIAVHNDSGSPAFCRVIWRK
                     HIAEMTDLSAAERGELMEMVYKVEAAMRQVFQPAKINLASLGNVVPHLHWHIIARFEN
                     DASFPAPIWANPVRKHGMTLPQDWTEQLKKLL"
BASE COUNT         1624 a         1758 c         2017 g         1841 t
ORIGIN      
        1 cagtacggca aggcgaggca acgccgtact ggtttttgtt aatccactat aattgaaggg
       61 gttatcggct tgtgcaacgg aagcccaagt tgtgcaagac gtatttggat tgcaggctgg
      121 tgcggatgcc gtagcggagg aaggcggcat agttggacga gtcgctcgac ccgatagacg
      181 cgccgctgca aaacatttgc gcgttggcat tgccggaaga aagcaggctg ctgttgaaat
      241 cttccgtcca ttcccaaatc agcccgtgca tatcataaac gccccagtag ttcgggcggc
      301 ctttgccgac atcgtgcagg cctttccgtc cgccgtcggc ataccaatcg agaatagtgc
      361 ggttgtagcc gggttcgttt gagccgtttt tctgcgtggc ggaagcaagt ccggcaaatt
      421 cccattcgtc aatggtcggc aggcgtttgc cttgtgcggc gcaataggcg ttggcggcaa
      481 accaggaaac attggttacc ggttgtttta attcgcccgc cttcggcgca tagctgcggc
      541 tgccgttttt catccaatgc ttcaggtaag cgggttctgc ctgtttggaa ccgatcctgc
      601 ctttttgcca ttgggggtgg ctgttgacaa attcggcaaa ctcggcattg gtaacgggat
      661 atttatccag tttgaacggt ttgactttaa tcaggccggt atcttttttc agataaagcg
      721 ggcggtagct gccgccttcg atttgaacca tttcggcagc cgccgcttga gtgccggcga
      781 gtgccgcaca gagaaagagt aaccgggcaa acttcatatc atgcctcctg acaggcagtt
      841 aaaattgatt tttcagacgg cattttaaac aaaaagccgc gaatgccgtc tgaagaatca
      901 atcttccgaa aggaaagatt ggttgttaaa aaaccactgc cgtgcgtaat taagtacggc
      961 ggcagtggtt cgtttgccta aaaatgggtg ttcaatttag taatcgcttt ttgcaggagc
     1021 agaggctgca ggagcagaag ctgcgggagc ggaagcagca ggagctgcac cgttaccggc
     1081 gtaagcggta tcactcaatt tttgagtcat gatttcaggg ttttctgcac cttctacttt
     1141 caattgaccc agtgcgcctt tgttgaatgc gcggaagata gagtggtcaa ccaaagtgta
     1201 gctgcccggg atgtcgactt tgaattcgac gatggcagag ccgccggcag gaacgatggt
     1261 actttgtacg ttttcgttaa tcagtttgcc gccttcaaca taaactttgt cgaagatttc
     1321 accgattacg tggaaggaag acaccaagtt cgggccgccg ttaccaacgt acatacgtac
     1381 agtttcgcct gctttggctt tcagggcgtt gtcgccggcg atagcaccta cgtgaccgtt
     1441 gaatacgacg tattcaggct gttcggcaac agctttgtcc atatcgaacg gttgcaggcc
     1501 ttgcgcacct tttttgcctt tggtgtagaa gtcgccttgg acgatgtaga actctttatc
     1561 cactttcggc aggccttctt taggctcgac caaaatcagg ccgtacatac cgttggcgat
     1621 gtgcataccg accggcgcga cggcgcagtg gtagatgtac agacccggtt gcagggcttt
     1681 gaagctgaat gtggaagtgc ggcccgggcg gtaaaggtcg cggctgcacc gccgccctga
     1741 ccggttgcgg cgtggaagtc gacgttgtgc ggaacggtag aagaaggatt gttggaaaat
     1801 tccacttcaa ccgtatcgcc ttcgcgtacg cggatcatgc gacccggaac gtcgccgtca
     1861 aatgtccagt agcggtattc cacaccgtct tccatggtca tggttttttc gacggtttcc
     1921 attttcacgc gtactttggc agggtagtcg cggtcgattg caggaggtac ttctggagcg
     1981 tgtgtggtaa ccgcatcgat aacgggcagt tcgcctgtcg gcgtttcggc ggcggtttgt
     2041 gcggcggaac ttgcggcttc tgcggaagcg gcaggggctt gcgcggcagg ttcgccgccg
     2101 caggcggcta atgcgaataa ggaagcaatc attgcagcta aggcttggcg tttcataata
     2161 ttttcctttt gtaagaaaag tagagggatt ggttaagaac ttggtgtgat tatgcgtttg
     2221 ccccattggg ggcattttga tttaagtcaa ataattcata aaatatgaac ttaaaatgat
     2281 acttctaata ctttatagct actaaaaatt acaataaata ggctgatttg cttaaggact
     2341 tcggcaaatc aggcaaaggc agggtagttg ccgactaaag aataatgata gttattatca
     2401 tatatgtatt tgttttatat gtgagtttct ttaaacaaat gtttatttgc gcggtaaacc
     2461 gtgatacaat ctttaacatt catatttgat gaattaatac ccaaccactt ttaccaaaat
     2521 taaggagtac ttaaaatggg acagtacaag aagctgtggt acttgctgtt tgccgttctg
     2581 gcggtatgct ttaccattct tggctatatg ggcagcgagg tttataagaa agccccgcct
     2641 taccccgaac aggtcgtttc cgcatcaggc aaagtgctga tgacgaaaga cgatattttg
     2701 gcaggtcagt ctgcgtggca gagtaccggc ggtatggaag tcggttcgat tctgggtcac
     2761 ggcgcatatc aggctccgga ctggacggcc gactggctgc atcgtgagtt gtccgcctgg
     2821 ttggatttga ccgcgcaaca gacttacggc aaaaaattcg atgaagtttc ccctgaagaa
     2881 caagccgttc tgaaaacccg actggctgac gaataccgca accaaagccg tattaaagaa
     2941 gacggcagcg tcgtcatcag cgatacgcgc gtgaaagcca tcgaaagcat cctgccttat
     3001 taccacggtg tttacggcga tgatcccgcg ctgcaaacca cccgcgaaca ctttgcaatg
     3061 aaaaacaaca cattgccaag ccaagaagcg cgtgaaaaac tgttcgactt cttcttctgg
     3121 acttcttggt ctgcttcgac caaccgtcct gacgagacgt tcacttatac caacaactgg
     3181 ccgcacgagc ctttgatcaa caacgtaccg accactgaaa actatatgtg gtcattcacc
     3241 agcgttgttc ttctgctgat gggcatcggt ttgctgatgt ggggttattc cttcttgacc
     3301 aaacacgagg aagtggaagt gccgtctgaa gacccgattt ccaaaatcca actgacccct
     3361 tcgcaaaaag cattgggcaa atacgtcttc ctgacggtcg ccctgtttgt ggtacaagta
     3421 ttgctgggcg gactgaccgc gcactacacc gtcgaaggcc agggtttcta cggcattgac
     3481 gaggcgttgg gctttgaaat gtccgactgg ttcccctacg ccctgacccg tacttggcac
     3541 atccaatccg ctatcttctg gattgcaacc ggctttttga cggcaggttt gttcctcgcg
     3601 ccgattgtca acggcggcaa agatcccaag ttccaacgtg ccggtgtgaa cttcctctat
     3661 atcgccctct tcatcgtggt cggcggttct tacgcgggca acttcttcgc gttgacgcac
     3721 atccttcccc ccgaatttaa tttctggttc ggacaccaag gttacgaata cctcgatttg
     3781 ggtcgtttct ggcaactcct gctgatggtc ggactgctgt tgtggctgtt cctgatgttg
     3841 cgctgcacgg tttccgcctt caaagaaaaa ggcgtggaca aaaacctgct ggcaatcttt
     3901 gtcgcttcta tggtcggtgt gggcgtgttc tacgcaccgg gactgttcta tggcgaaaaa
     3961 tccccgattg ccgtaatgga atactggcgt tggtgggtgg ttcacctgtg ggtggaaggc
     4021 ttctttgaag tatttgccac tgccgccttc gcatttgtct tctacaatat gggctttgtc
     4081 cgccgcagta ccgccactgc ctccactttg gccgctgccg ccatctttat gttgggcggc
     4141 gttccgggta cgctgcacca cctgtacttc tccggctcta cctccgcctc tatggcaatc
     4201 ggcgcctgct tctccgcttt agaagtcgtg ccgctggtgt tgctgggtcg tgaagcatac
     4261 gagcattggt cttaccaaca cctgtccgac tgggcgaaac gcctgcgttg gccgctgatg
     4321 tgcttcgttg cagtcgcctt ctggaatatg atcggtgccg gcgtattcgg cttcctgatc
     4381 aatccgccga tttccctgtt ctatatccaa ggtttgaaca cttctgccgt tcacgcgcac
     4441 gccgccttgt tcggtgtgta cggtttcttg gcattgggct tcgtattgct ggttgcccgt
     4501 tatttgaaac cgaacgtgca gtttgacgac aaactgatga cttggggctt ctggctgctg
     4561 aacggcggtt tggtgggtat gattgccatc agcctgttgc cggttggcgt gattcaggca
     4621 tacgcctcca tcacgcacgg tctgtggtat gcgcgtagcg aagagttcct gcaaatggaa
     4681 atcttggata ctctgcgttg ggttcgtact gctgctgact tgatcttcat cggcggtgca
     4741 atctgtgtcg ccatccaagc cactaaaatc gtattcggcc gcgacaaata agttttgcgg
     4801 tatgaaatga gcaactgcac ccgttttcgg gtgcagtttt ttattgcgga ttgggacggg
     4861 aatggaaaag gatgtggatt ttttatttta atcggctata caattgctgc tttcatgccg
     4921 tctgaagcac gtttcagatg gcatcggttt acatcagata aggataaaaa tgggtattta
     4981 cgattttcaa atgaaagatg cagaaggcaa tgcggttgat ttgtcaggct atcgcggcaa
     5041 ggttctgctg attgtcaaca cggcaacgcg ttgcggtctg accccgcaat acgaggcttt
     5101 gcagaagctg tatgcacaat ataccgcaga aggcttggag attttggatt ttccgtgcaa
     5161 ccagttccgc gaacaggctc ccgaaagcag cggagaaatt gcccaagtgt gtatgatgaa
     5221 gtttggcacg aagtttaaga ttttcgacaa aatcgaagtc aatggagcaa ataccgcgcc
     5281 cttgtatgcc tacctgaaat ccgtcaaacc gcaagataaa ggcaatcatc tgtttaaaga
     5341 tttcgtgttg aagctcgcag ctttgggaga gaagcgcgac gaaggcgaca tcaaatggaa
     5401 ctttaccaaa ttcctcgtca accgcgacgg cgaagtggtc gagcgttttg cgcctagtgt
     5461 tacgcccgaa gaaatcgaag ccgatattcg ggcattgctg taatctgccg ccgtcttggg
     5521 aaatgccgtc tgaaggcttc agacggcatt tgtccgtttg cgggtttatt ccgaaatatc
     5581 ggcaacaccg ctttcgggga agatgggcaa atccggcggt gggagcaggg tatccaaagt
     5641 cagggcggac gcatcgagtg tggggtagcc ttcaaacgcg accgaataac cgctgtttcc
     5701 gttcatacgg attcgggcgt gcgcgcccag agggaaagtg attttgtcgg caatgtgccc
     5761 gaagggaaag cccgtcagca cggggatttt cgccgtgcgc gaaacatggt tggcaacggc
     5821 ggaaaaatca taagacggat catagacatc tcgaattttt tccatacgga aattgccgaa
     5881 cacgatggcg cgctgtttct tcaaaatacc cgaaagatac agcgtattga gcatacgttc
     5941 gatgcggtag ggctgttcgc cgacatcttc gaggaacaaa atgccgccgt cgatgtcggg
     6001 catataaggc gtgccggcga gcgaggcgag gacgcttaag ttgccgcccc acaatatgcc
     6061 ttcggtttcg acatcggcgc gttggatata aggaacatca acggtcaggc ggttttgggt
     6121 tgcacccttg ataaaggcat ccatcgtaaa cgcaccgggg gcgggtttgc caaaatcgct
     6181 ataagccatc gggccggcaa aactcatcat attgcctttt gccaacaatg ccagctggac
     6241 ggcgcatacg tcgctgaatc cgaaaaacag cgtgccgtgt tcgcgcatcc ttgcgccgag
     6301 cgaagcaaaa tcgatatgcg gcagaatccg cgccgcaccg taaccgccgc gcaagcccat
     6361 cagcacttta ggcgtggcga cgcggccgga agcgacctct tggaaatcgg cgacacgttg
     6421 tgcgtccgta ccagcaaacc gttggaagcg gcggctgccc gcctgttggt tggttacggt
     6481 aaaaccggca ttgtaaaggc gggttaaggc tgtgttgacg cggttggtgt cttcggcaaa
     6541 gcctgacgaa gcgacaacgc gcagaaggtt gccgtccgaa ctttgacggc gtggcgtttg
     6601 gagaggcacg gttcgggctt tcacaacaga atgggaagag ggaaggggcg gaacggatgt
     6661 ggcggatgtg ccgcaagcct gaagcagtcc cgcgccggcg gcggcggtgc aggttttcag
     6721 aaaacgacgg cgggaggtcg gttcggtcat aatttccctt tcatacggtt tcagacggca
     6781 tcggcgggct taaagcagct ttttaagctg ttccgtccaa tcttgcggca gggtcatacc
     6841 gtgttttcgg acggggtttg cccaaatcgg cgcagggaag gacgcatcgt tttcaaagcg
     6901 ggcgataata tgccaatgca ggtgcggcac gacattgccc aagctggcga ggttaatctt
     6961 ggcaggttga aacacttggc gcatagcggc ttcgactttg tacaccattt ccatcaattc
     7021 gccgcgttcc gctgccgaaa ggtcggtcat ttcggcaata tgcttacgcc aaatgacgcg
     7081 gcagaatgca ggcgaaccgc tgtcgttatg gacggcgatg acgcgcagct tgggggtttg
     7141 cagcaaaata tcttcatctt gtgccgtgca gatggggcag ggttgggcgg tcatttttcc
     7201 ttattcctga aagtgtttaa aaaacggtag gataatttct
//
LOCUS       DBBZXU010000098         7202 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.098, whole genome shotgun sequence.
ACCESSION   DBBZXU010000098 DBBZXU010000000
VERSION     DBBZXU010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7202
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.098"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..547
                     /gene="dapB"
                     /locus_tag="ACJJDE_001726"
     CDS             <1..547
                     /gene="dapB"
                     /locus_tag="ACJJDE_001726"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HGG7541615.1"
                     /translation="CVEKQVNIIIGTTGFDDAGKAAIHTAAEQTGIVFAANFSVGVNL
                     TFHILDTVARVLNEGYDIEIIEGHHRHKVDAPSGTALRMGEVIAGALGRDLKQCAVYG
                     REGHTGPRDPSTIGFATVRAGDIVGDHTALFATDGERVEITHKASSRMTFAAGAVRAA
                     VWVNGKTGLYDMQDVLGLNNR"
     gene            complement(661..1071)
                     /locus_tag="ACJJDE_001727"
     CDS             complement(661..1071)
                     /locus_tag="ACJJDE_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541616.1"
                     /translation="MTTYTIPKKDYQFLYIYEGTLLNYTLKNDEFHIIVQNVDYPDFP
                     QEIPTPNYTDWVKIKFKQFSYLKFVYGYATKSQDINIDNTLELGELKQDDEILDYGGA
                     LELIGGRYDFPTAFRIDIVCREIELEFLDQEGFN"
     gene            complement(1073..1306)
                     /locus_tag="ACJJDE_001728"
     CDS             complement(1073..1306)
                     /locus_tag="ACJJDE_001728"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541617.1"
                     /translation="MKQHVLQKKGGEIVINGTSNNKYLRGIPNEGELARVGLRLKYNG
                     PLKEEFKQLKFHKSSRTNLDSKNLKLIVFEKVK"
     gene            complement(1327..2481)
                     /gene="lpxB"
                     /locus_tag="ACJJDE_001729"
     CDS             complement(1327..2481)
                     /gene="lpxB"
                     /locus_tag="ACJJDE_001729"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008915 - lipid-A-disaccharide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HGG7541618.1"
                     /translation="MVDKKSPLIAVSVGEASGDLLGAHLIRAIRERCPQARFTGIGGE
                     LMKAEGFESLYDQERLAVRGFVEVVRRLPEILRIRRGLVRDLLSLKPDVFVGIDAPDF
                     NLGVAEKLKRTGIPTVHYVSPSVWAWRRERVGKIVHQVNRVLCLFPMEPQLYLDAGGR
                     AEFVGHPMAQLMPLEDDRETARKTLGVDAGIPVFALLPGSRVSEIDYMAPVFFQTALL
                     LLERYPAARFLLPAATAATKRRLAEVLQRPEFAGLPLTVIDRQSETVCRAADAVLVTS
                     GTATLEVALCKRPMVISYKISPLTYAYVKRKIKVPHVGLPNILLGKEAVPELLQHDAV
                     PEKLAAALADWYEHPDKVAALQQDFRALHLLLKKDTADLAARAVLEEAGC"
     gene            complement(2547..3539)
                     /locus_tag="ACJJDE_001730"
     CDS             complement(2547..3539)
                     /locus_tag="ACJJDE_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HGG7541619.1"
                     /translation="MKTHEISKDSVSLIGVAEHEAGQRLDNYLIKILKGVPKSHIHRI
                     IRAGEVRLNKKRCKPDSRIAEGDTVRIPPVRVAEKEMPSERRAAVPARAFDVVYEDDA
                     LLVIDKPSGVAVHGGSGVSFGVIEQLRRARPEAKYLELVHRLDKDTSGLLMVAKKRSA
                     LVKLHEAIRNDHPKKIYLALGVGKLPDDNFHVKLPLFKYTGAQGEKMVRVSADGQSAH
                     TVFRVLSRFSDGILHGVGLSHLTLVRATLKTGRTHQIRVHLQSQGCPIAGDERYGDYQ
                     ANRRLQKLGLKRMFLHASELHLNHPLTGEPLVLKVGLPPDLAQFAVMLENGTKM"
     gene            4032..6791
                     /locus_tag="ACJJDE_001731"
     CDS             4032..6791
                     /locus_tag="ACJJDE_001731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HGG7541620.1"
                     /translation="MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKG
                     IITRIEPSLEACFVDYGTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQV
                     EKDERGNKGAALTTFISLAGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPN
                     GMSIIARTAGIGRSAEELEWDLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRD
                     YFRPDIGEILVDNQEVYDQVAEFMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAF
                     SRSVSLPSGGAIVIDHTEALVSIDVNSARATRGADIEDTAFKTNMEAAEEVARQMRLR
                     DLGGLVVIDFIDMENPKHQRDVENVLRDALKKDRARVQMGKLSRFGLLELSRQRLKPA
                     LGESSHVACPRCAGTGVIRGIESTALHVLRIIQEEAMKDNTGEVRAQVPVDVATFLLN
                     EKRAELFAMEERLDVNVVLIPNIHLENPHYEINRIRTDDVEEDGEPSYKRVAEPEEDE
                     SAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEKKTSWWDSFKAWLKRIFGGSETQA
                     APAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKVEVREVAGKTAGQEARADKAET
                     RNNGNRRRNERGDRAAERANEAEIQSRNVQPAATVADAAPSETEMQTGKRRRNGSRSE
                     RSQTAPETAAVAETAVQTAENTPSEPHTAEDKGSKPKSERNRRERDSRDAKERRERNN
                     QRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVFGETDANAPITVSIADPVA
                     ERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQEMPSETATFTAAAE
                     QARETAQTGGLVLIETDPAALKAWAAQPEVQTGRGLRRSEQPKPSEVATVPAEEMIQV
                     ETRQG"
BASE COUNT         1808 a         2269 c         1736 g         1389 t
ORIGIN      
        1 atgcgttgaa aaacaagtca acatcatcat cggcacaaca ggcttcgacg atgcgggcaa
       61 agccgctatc cacactgccg ccgaacaaac aggcatcgtt ttcgccgcca acttcagcgt
      121 cggcgtcaac ctcaccttcc acatcctcga caccgtcgca cgcgtattaa acgaaggcta
      181 cgacatcgaa atcattgaag gccaccaccg ccacaaagtc gatgccccca gcggcaccgc
      241 gttacgcatg ggcgaagtca tcgccggcgc gctcggcaga gacctcaaac aatgcgccgt
      301 ttacggccgc gaaggccaca ccggtccgcg cgatccgtcg accatcggct ttgccaccgt
      361 ccgcgcaggc gacatcgtcg gcgaccacac cgccctcttc gccaccgacg gcgagcgcgt
      421 ggaaatcacc cacaaggcca gcagccgcat gacctttgcc gccggtgccg tccgcgccgc
      481 agtttgggta aacggcaaaa cgggtttgta cgatatgcag gacgtactcg ggctgaacaa
      541 ccgttaaccc ccatacaaaa tgccgtctga aaagatattg ttcagacggc attttgccaa
      601 caggctccgt atcggcatat caataaagtt gcttgcgcgg catgacaagc tacggctcgt
      661 ttaattgaaa ccctcctgat ctaaaaattc taactctatt tcccggcaaa ctatatctat
      721 cctaaaagca gtcggaaaat catacctacc gcctatcaat tccagcgcac ctccataatc
      781 caagatttca tcatcctgct ttaattcgcc aagttccaat gtattatcga tatttatatc
      841 ttggctcttt gtagcgtatc catagacaaa tttcagatag ctgaactgct tgaatttaat
      901 ttttacccag tctgtataat ttggtgtagg aatctcttga ggaaagtccg gataatccac
      961 attctggacg atgatatgga attcatcgtt tttcaaagta tagtttaata gagtgccctc
     1021 atatatatac agaaattgat aatctttttt tggaatggta taagttgtca tattatttta
     1081 ccttttcaaa aacaatgagt ttaagatttt ttgagtccaa gttggttcta ctactcttat
     1141 gaaatttcag ttgtttaaac tcttccttta acggcccatt atattttaac cttaatccca
     1201 ctcgagccag ttctccttca tttggaattc ctcttaaata cttattgttt gatgtgccat
     1261 taatcacaat ttctcccccc tttttttgta atacgtgctg cttcaagaag ataatccatt
     1321 aaccgctcaa catcccgcct cttccaaaac cgcgcgcgcg gccaaatccg ccgtatcttt
     1381 tttcaacagc aggtgcaacg ccctgaaatc ctgttgcagc gcggcaacct tatcggggtg
     1441 ttcgtaccag tccgccaacg ccgccgccag tttttccggt acggcatcat gttgaagcag
     1501 ctccggcaca gcctccttac ccaacaggat attcggcagg ccgacatgcg gcactttgat
     1561 tttgcgtttc acataagcat aagtcagcgg cgaaatcttg tagctgatga ccatcggacg
     1621 cttgcacaga gccacttcca aagttgccgt accgctcgtt accagcaccg catccgccgc
     1681 cctgcacact gtttcagact gtctgtcgat taccgtcagc ggcaatccgg caaactccgg
     1741 ccgctgcaaa acttccgcca aacgccgctt cgtcgccgcc gttgcggcag gcagcaggaa
     1801 gcgtgcggca ggatagcgtt ccaacaacaa taatgccgtc tgaaaaaaca ccggcgccat
     1861 atagtcgatt tcgctgacgc ggctgccggg cagcagggcg aatacgggga tgccggcatc
     1921 cacgcccaaa gttttccgcg ccgtttcacg gtcgtcttcc aagggcataa gctgcgccat
     1981 cggatgaccg acaaactccg cacgtccgcc cgcatcgaga taaagctgcg gctccatcgg
     2041 gaacaggcac agcacgcggt tgacctgatg cacgattttg cccacgcgtt cccgccgcca
     2101 cgcccacacc gacggactga cataatgcac ggtcggaatg cccgtccgtt tcagcttttc
     2161 cgccacaccc aaattgaaat cgggcgcatc gataccgaca aagacatcag gtttcaacga
     2221 cagcaaatcc cgtaccagcc ccctgcgtat ccgtaaaatt tccggcagcc gcctgaccac
     2281 ttcgacaaag ccgcgcaccg ccagccgctc ctgatcataa aggctctcga aaccttccgc
     2341 cttcatcagt tccccgccga taccggtaaa ccgcgcctgc gggcaacgct cgcggatggc
     2401 gcgtatcagg tgcgccccca acaggtcgcc cgacgcttcg ccgacactga cggcaatcaa
     2461 agggcttttt ttatcaacca tattcgttct tcttcacata ctttcacgtc ccgatgccgt
     2521 ctgaaggctt cagacggcat cggggttcac attttcgtcc cgttttccaa catcaccgca
     2581 aactgtgcca aatccggcgg cagccccacc tttaacacca gcggctcgcc cgtgagcgga
     2641 tggttcaggt gcagctcgga cgcgtgcaaa aacatccgct tcaaacccaa cttctgcaaa
     2701 cgacggttcg cctgataatc gccgtagcgt tcgtcgcccg caatcggaca gccttgagat
     2761 tgcaggtgga cgcggatttg gtgcgtgcgc cccgttttca acgtcgcccg caccaaagtc
     2821 aggtgcgaca gcccgacacc gtgcaaaatg ccgtctgaaa aacggcttaa cacacggaac
     2881 accgtatgcg ccgactgccc gtccgcactg acgcgcacca tcttttcgcc ttgtgcgccg
     2941 gtatatttga acaggggcag tttgacatgg aaattgtcgt ccggcagttt gcccaccccc
     3001 agcgcaaggt agattttttt ggggtggtcg ttacggatgg cttcgtgaag tttgacgagc
     3061 gcgctgcgtt tcttcgccac catcaacaag ccgctcgtat ccttgtccaa acgatgaacc
     3121 aactccaaat acttcgcctc cggacgggcg cggcgcaact gttcgataac gccgaaactc
     3181 acgccgctgc cgccgtggac ggcaacgccg gacggtttgt cgatgaccaa aagcgcatcg
     3241 tcttcgtaaa caacgtcaaa cgcacgcgcc ggtacggcgg cacgcctttc agacggcatt
     3301 tccttctccg ccacgcgcac aggcggaatc cgcaccgtat ccccctccgc aatacggctg
     3361 tcgggtttgc agcgtttctt gttcaaccgc acctcgccgg cgcggataat gcggtggata
     3421 tggctcttgg gaacaccctt gaggattttt atcagatagt tatcaaggcg ttgacccgcc
     3481 tcatgttcgg caacccctat caagctgacc gaatctttgc ttatttcgtg cgttttcatc
     3541 tataatccga acatccgttt cagcaaaaag cgcgcccgcc gcgcctcctg aaacggttta
     3601 ctttaaaacg gaattttata ttaaaaacgc actccgcaaa gcattttccc tgcgcctgtt
     3661 cccagccggc aggcgcagaa cgtaatcaag tttgaattga ttttgccgtt tcggcgcgga
     3721 agtaagacgg cagccgggcc caagtcccaa acgcaaaccg cccaaaacac aggcatcacg
     3781 ataacaagaa gaagccggcc cccatttttc cgaccgcagc gttcggaacg cggcagacaa
     3841 accgccgcat cgatctttat agccttctgt atccgaccct tccgcacacg gttctccgga
     3901 acgtgcatcc ctgcggattt tcaactcaaa aactgattac cggttttatc cgaaaacatc
     3961 ggaaaaccca gccttacgga atgccgaacc gggcatgtgc cgtctgaacg ccgcctgccc
     4021 acgaggtgat catgaaaaga atgttattta acgcaacgca ggccgaagag ctgcgcgttg
     4081 ccatcgtcga cggacaaaac ctgctggatt tggacatcga aacgctgggc aaagaacagc
     4141 gcaaaggcaa tatctacaaa ggcatcatta cccgcatcga gccgtcgctg gaagcgtgtt
     4201 tcgtggatta cggaaccgac cgccacggct tcttgccgtt taaagaagtc tcccgctcat
     4261 acttccaaga ctacgaaggc ggacgcgcgc gcatccaaga cgtgctcaaa gaaggcatgg
     4321 aagtcatcgt ccaagtcgaa aaagacgagc gcggcaacaa aggcgccgcg ctgaccacct
     4381 tcatcagcct cgccggacgc tatctggtat tgatgccgaa caacccgcgc ggcggcggcg
     4441 tatcccgccg tatcgaaggt gaagagcgtc aagagttgaa agccgccatg gcggaactcg
     4501 acattccgaa cggcatgagc atcatcgccc gtaccgccgg catcggccgc agcgcggaag
     4561 agttggaatg ggacttgaac tacctcaaac aactctggca ggcgattgaa gaagcaggaa
     4621 aagcgcatca cgacccctac ctgctcttta tggaaagctc gctgctgatc cgagccatcc
     4681 gcgactattt ccgccccgac atcggcgaga ttttggtgga caatcaagaa gtttacgacc
     4741 aagttgccga gttcatgagc tacgtcatgc cgggcaatat aggccgtctg aaactctacg
     4801 aagaccacac gccgctgttt tcccgcttcc aaatcgaaca ccaaatcgaa agcgcgtttt
     4861 cgcgcagcgt cagcctgccc tccggcggcg cgatcgtcat cgaccatacc gaagccctcg
     4921 tctccatcga cgtgaactcc gcacgcgcca ctcgcggcgc agacattgaa gacaccgcgt
     4981 tcaaaaccaa tatggaagcc gccgaagaag tcgcccgaca aatgcgcctg cgcgacttgg
     5041 gcggcttggt cgtcatcgac ttcatcgaca tggaaaaccc caaacaccag cgcgatgtgg
     5101 aaaacgtcct gcgcgacgcg ctcaaaaaag accgcgcccg cgtgcagatg ggcaaactct
     5161 cccgtttcgg acttttagaa ttgagccgcc aacgtttgaa accggctttg ggcgaaagca
     5221 gccacgtcgc ctgtccgcgc tgcgccggca ccggcgtgat tcggggcatc gaatccaccg
     5281 ccctgcacgt tttacgcatc attcaagaag aagcgatgaa ggacaacacc ggagaagtgc
     5341 gcgcacaagt gcccgtcgat gtcgccacct tcctgctgaa cgaaaaacgc gccgagctgt
     5401 ttgcgatgga agagcgtttg gatgtcaacg tcgtcctgat tccgaacatc cacctcgaaa
     5461 atccgcacta cgaaatcaac cgcatccgca ccgacgacgt agaagaagac ggcgaaccga
     5521 gctacaaacg cgtcgccgag ccggaagaag acgaatccgc caaaccgttc ggcggcgaaa
     5581 aagccaaagc cgcccgtccc gaacccgccg tcaaaggcgt gcgccacacc agccccgccc
     5641 cgactgccgc ccccgagaaa aaaacctctt ggtgggacag cttcaaagca tggctcaaac
     5701 gcattttcgg cggcagcgaa acccaagccg cgcccgctgc cgaaacctcc gaaaaacgca
     5761 gcacggcaaa ccgcagcggc agccgcgcca acaaccgccg ccaaaacccg cgccgcagca
     5821 aacgcgaagg cagcaaagta gaagtccgcg aagtggcagg caaaactgcc ggacaggaag
     5881 cgcgtgccga caaagccgaa acgcgcaaca acggcaaccg ccgccgcaat gaacgcggcg
     5941 accgtgccgc cgaacgcgcc aacgaagcgg aaatccaaag ccgcaacgta cagcctgccg
     6001 caaccgttgc agatgccgca ccgtccgaaa ccgaaatgca aaccggcaaa cgccgccgca
     6061 acggcagccg cagcgaacgc agccaaaccg cgccggaaac cgccgccgtt gccgaaacag
     6121 ccgttcagac agcggaaaac acgccgtccg aaccgcatac cgcagaagac aaaggcagca
     6181 agcccaaatc cgaacgcaac cgccgcgaac gcgacagccg cgacgccaaa gaacgccgcg
     6241 agcgcaacaa tcagcgcgac cgccgtcaaa acggcaaaaa acgcaatatc ccgtctgccg
     6301 ccaaaatcga gcagtacctg aatattcacg acaccgccga caaagtccgt tccgccgccg
     6361 cgcacgtttt cggcgaaacc gacgcaaacg cgccgattac cgtcagcatt gccgatccgg
     6421 ttgcagaaag ggatcttccg acagcatctc ccgccgtttc aaacggcgac gcaccggttt
     6481 atgatgcggc ggaaaaaatc cgccgtgcca ccgccgccat cctgcccgaa ggcgcgacac
     6541 cgaaagccga agcacaggaa atgccgtctg aaaccgcaac ctttacggct gcggcggaac
     6601 aggcacggga aaccgcacaa accggcggac tcgtcctgat cgaaaccgac cctgccgcat
     6661 tgaaggcatg ggcggcacaa cccgaagtcc aaaccggacg cggtttgcgc cgttccgaac
     6721 agcccaagcc gtctgaagtc gcaaccgtcc ctgccgaaga aatgatccaa gtcgaaaccc
     6781 ggcaaggctg aaccgacggc ggcaaaaaga ggttctgttc cgcagaacct cttttttata
     6841 tagattcgga tacctgcaat gccgtctgaa gcctcaccat tcccatgatt accgcaacct
     6901 ttcgtcattc ccgtgaaaac gggaatctag aacctcaaac tttcaaataa cctttgaata
     6961 ttgccgctgc cttaaggtct ggattcccac ctgcgcggaa tgacggttta gaagttgccc
     7021 gaaacctcaa aaaaaactga aaccgaacaa gccggattcc cgcaacattc cgtcattccc
     7081 gtgaaaacgg gaatatagaa ccccaaactt tcagataatc tttgaatatt gccgtcgccc
     7141 aaaggcctgg attcccgcct gcgtgggaat gacggcggag ggtggacgat gccgtctgaa
     7201 ac
//
LOCUS       DBBZXU010000099         7142 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.099, whole genome shotgun sequence.
ACCESSION   DBBZXU010000099 DBBZXU010000000
VERSION     DBBZXU010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7142)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7142)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7142
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.099"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(107..1453)
                     /gene="mnmE"
                     /locus_tag="ACJJDE_001732"
     CDS             complement(107..1453)
                     /gene="mnmE"
                     /locus_tag="ACJJDE_001732"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HGG7541621.1"
                     /translation="MSDNVPTIAAVATAPGRGGVGVIRISGKNLLPMAEALCGKTPKP
                     RVATYADFTDADGQAIDSGLLLFFAAPASFTGEDVIELQGHGGPVVMDMLLNRCLELG
                     ARLAEPGEFTKRAFLNDKLDLAQAEGVADLIDASSRSAARLALRSLKGDFSRRIHGLV
                     EDLITLRMLVEATLDFPEEDIDFLEAADARGKLDGLRRAVDDVLANAQQGAILREGLN
                     VVLVGAPNVGKSSLLNALAGDEVAIVTDIAGTTRDAVRERILIDGVPVHIVDTAGLRE
                     TDDVVERIGIERSRKAVSEADVALVLVDPREGVNDKTRAILDALPPELKRIEIHSKSD
                     LHAHAAGGFGTGAETVIALSAKTGDGLDALKRTLLREAGWQGEGEGLFLARTRHVNAL
                     KAAQEELSLAALCGNHQIELFAEHLRLAQVACGEITGEFTADDLLGVIFSRFCIGK"
     gene            1584..1739
                     /locus_tag="ACJJDE_001733"
     CDS             1584..1739
                     /locus_tag="ACJJDE_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541622.1"
                     /translation="MEKRNTYAFLLGIGSLLGLFHPAKTAIRPNPADDLKNIGGDFQR
                     AIEKARK"
     gene            1736..2167
                     /locus_tag="ACJJDE_001734"
     CDS             1736..2167
                     /locus_tag="ACJJDE_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2335 domain-containing protein"
                     /protein_id="HGG7541623.1"
                     /translation="MTENAQDKARQAVETVVKSPELVEQILSDEYVQIMIARRFHSGP
                     LPPPSDLAQYNDIISNGADRIMAMAEKEQAVRHETIRQDQTFNRRGQLYGFISVILIL
                     LFAVFLVWSGYPATAASLAGGTVVALAGAFVIGRSRDQGKN"
     gene            2301..6701
                     /gene="app"
                     /locus_tag="ACJJDE_001735"
     CDS             2301..6701
                     /gene="app"
                     /locus_tag="ACJJDE_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_168458961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion and penetration autotransporter App"
                     /protein_id="HGG7541624.1"
                     /translation="MKTTDKRTTETHRKAPKTGRIRFSPAYLAICLSFGILPQAWAGH
                     TYFGINYQYYRDFAENKGKFAVGAKDIEVYNKKGELVGKSMTKAPMIDFSVVSRNGVA
                     ALVGDQYIVSVAHNGGYNNVDFGAEGSNPDQHRFSYQIVKRNNYKAGTKGHPYGGDYH
                     MPRLHKFVTDAEPVEMTSYMDGWKYTDQNNYPDRVRIGAGRQYWRSDEDEPNNRESSY
                     HIASAYSWLVGGNTFAQNGSGGGTVNLGSEKIKHSPYGFLPTGGSFGDSGSPMFIYDA
                     QKQKWLINGVLQTGNPYIGKSNGFQLVRKNWFYDEIFTGDTHSVFYEPHQNGKYTFHD
                     NNNGTGKINAKHEHNSLPNRLKTRTVQLFNVSLSETAREPVYHAAGGVNSYRPRLNNG
                     ENISFIDEGKGELILTSNINQGAGGLYFQGDFTVSPENNETWQGAGVHISEDSTVTWK
                     VNGVANDRLSKIGKGTLHVQAKGENQGSISVGDGTVILDQQADDKGKKQAFSEIGLVS
                     GRGTVQLNADNQFNPDKLYFGFRGGRLDLNRHSLSFHRIQNTDEGAMIVNHNATTTST
                     VTITGNESITQPSGKNINRLNYSKEIAYNGWFGEKDATKTNGRLNLVYQPAAEDRTLL
                     LSGGTNLNGNITQTNGKLFFSGRPTPHAYNHLNNHWSQKEGIPHGEIVWDNDWINRTF
                     KAENFHIQGGQAVISRNVAKVEGDWHLSNHAQAVFGVAPHQSHTICTRSDWTGLTNCV
                     ENTITDDKVIASLTNTDISGNVDLADHAHLNLTGLATLNGNLTAGGDTHYEVTHNATQ
                     RGNLSLVGNAQATFNQATLNGNTSASGNASFNLSNNAVQNGSLTLSGNAKANVSHSAL
                     NGNVSLADKAVFHFENSRLTGQISGGKDTALHLKDSEWTLPSGTELGNLNLDNATITL
                     NSAYRHDAAGAQTGSVSDTPRRRSRRSRRSRRSLLSVTPPTSAESRFNTLTVNGKLNG
                     QGTFRFMSELFGYRSDKLKLAESSEGTYTLAVNNTGNEPASLEQLTVVEGKDNKPLSE
                     NLNFTLQNEHVDAGAWRYQLIRKDGEFRLHNPVKEQELSDKLGKAEAKKQAGKDNAQS
                     LDALIAAGRDAVEKTESVAEPARQAGGENVGIMQAEEEKKRVQADKDSALAKQREAET
                     RPATTAFPRARRARRDLPQPQPQPQPQPQPQPQRDLISRYANSGLSEFSATLNSVFAV
                     QDELDRVFAEDRRNAVWTSGIRDTKHYRSQDFRAYRQQTDLRQIGMQKNLGSGRVGIL
                     FSHNRTENTFDDGIGNSARLAHGAVFGQYGIDRFYIGISAGAGFSSGSLSDGIGGKIR
                     RRVLHYGIQARYRAGFGGFGIEPHIGATRYFVQKADYRYENVNIATPGLSFNRYRAGI
                     KADYSFKPAQHISITPYLSLSYTDAASGKVRTRVNTAVLAQDFGKTRSAEWGVNAEIK
                     GFMLSLHAAAAKGPQLEAQHSAGIKLGYRW"
     gene            complement(7017..>7142)
                     /locus_tag="ACJJDE_001736"
     CDS             complement(7017..>7142)
                     /locus_tag="ACJJDE_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541625.1"
                     /translation="KFRYARAAYFGLSKVSAQSHLKAMCLNLLKAANRLSAPAAA"
BASE COUNT         1897 a         2062 c         1731 g         1452 t
ORIGIN      
        1 tgtcctgatt tttgttaatc cactataaaa ccaaacggat cggattcccg tttttatggg
       61 ataacggaat gttcagccgg acaccgccac gatgctttcg atccgtttat tttccgatac
      121 aaaacctcga aaaaatcacg ccgagcaggt cgtccgccgt aaactcgccc gtgatttcgc
      181 cgcatgcgac ctgcgccaag cgcaagtgtt cggcaaacag ctcgatttga tggttgccgc
      241 acaatgccgc cagcgacaat tcttcctgcg ctgctttgag tgcgttgacg tgccgcgtcc
      301 gcgccaaaaa cagcccttcg ccctcgccct gccatccggc ctcgcgcaac aacgtccgtt
      361 tcagcgcgtc caagccgtcg ccggttttcg ccgacagcgc gatgacggtt tccgcgcccg
      421 taccgaaccc gcctgccgcg tgtgcgtgca aatcggattt gctgtggatt tcgatgcgtt
      481 tcaactccgg cggcaacgcg tccaaaatcg cccgtgtctt gtcgttcacg ccttcgcgcg
      541 gatcgaccaa caccagcgcg acatcggctt cggatacggc tttgcggctg cgttcgatgc
      601 cgatgcgttc gaccacgtcg tccgtctcgc gcaaacctgc cgtatcgaca atatgcaccg
      661 gaacgccgtc aatcaggata cgttccctga ccgcgtcgcg cgtcgttccg gcaatatcgg
      721 taacaatcgc cacttcgtcg cccgccagcg cgttcaacag gctggatttg ccgacattcg
      781 gcgcgccgac caatacgaca ttcagacctt cgcgcaaaat cgcgccctgc tgcgcgttgg
      841 caagcacatc atccacggcg cggcgcaagc cgtccagttt gccgcgtgcg tctgccgctt
      901 cgagaaaatc aatgtcttcc tcgggaaaat ctaacgtcgc ttcgaccagc atccgcaagg
      961 taatcaagtc ttcgaccaga ccgtgtatcc gccgcgaaaa atcgcctttg agcgagcgca
     1021 acgccagacg cgccgccgaa cggctggatg cgtcaatcaa atccgccacg ccttccgcct
     1081 gtgccaagtc cagtttgtcg tttaaaaacg cacgcttcgt aaactcgccc ggttcggcaa
     1141 ggcgcgcgcc caattccaaa cagcggttca gcagcatatc catcactacc ggcccgccgt
     1201 gtccctgaag ctcgataaca tcttcgcccg taaaacttgc cggtgcggca aaaaaaagca
     1261 aaagcccgct gtcgattgcc tgaccgtccg cgtccgtaaa atcagcatag gttgccacgc
     1321 gcggcttggg cgttttccca cacaaagcct ctgccatcgg cagcaggttt ttccccgata
     1381 tgcgtatcac gcccacgccg ccgcgcccgg gtgcggtagc gactgccgca atcgttggaa
     1441 cgttatccga cataaaaccc ccgaaaattc aaaacagccg cgattatagc aaatgccgtc
     1501 tgaagtccga cggtttggct ttcagacggc ataaaaccgc aaaaatgctt gataaatccg
     1561 tccgcctgac ctaatataac catatggaaa aacgaaacac atacgccttc ctgctcggta
     1621 taggctcgct gctgggtctg ttccatcccg caaaaaccgc catccgcccc aatcccgccg
     1681 acgatctcaa aaacatcggc ggcgattttc aacgcgccat agagaaagcg cgcaaatgac
     1741 cgaaaacgca caggacaagg cgcggcaggc tgtcgaaacc gtcgtcaaat ccccggagct
     1801 tgtcgagcaa atcctgtccg acgagtacgt gcaaataatg atagcccggc gtttccattc
     1861 gggaccgttg ccgccgccgt ccgacttggc gcaatacaac gacattatca gcaacggggc
     1921 agaccgcatt atggcaatgg cggaaaaaga acaagccgtc cggcacgaaa ccatacggca
     1981 agaccaaacc ttcaacaggc gcgggcaact gtacggcttc atcagcgtca tcctgatact
     2041 gctttttgcc gtcttcctcg tatggagcgg ctaccccgca accgccgcct cccttgccgg
     2101 cggcacagtg gttgccttgg cgggtgcttt cgtgattgga agaagccgag accaaggcaa
     2161 aaattaatga caaatcctag ggcgtgcttc atatccgccc gaacgccgaa ccgcacatat
     2221 aggcacatcc cgcgcgccgc ccggaagcgg aagccgcgcc ctcccaaaca aacccgaatc
     2281 ccgtcagata aggaaaaata atgaaaacaa ccgacaaacg gacaaccgaa acacaccgca
     2341 aagccccgaa aaccggccgc atccgcttct cgcctgctta cttagccata tgcctgtcgt
     2401 tcggcattct tccccaagct tgggcgggac acacttattt cggcatcaac taccaatact
     2461 atcgcgactt tgccgaaaat aaaggcaagt ttgcagtcgg ggcgaaagat attgaggttt
     2521 acaacaaaaa aggggagttg gtcggcaaat caatgacaaa agccccgatg attgattttt
     2581 ctgtggtgtc gcgtaacggc gtggcggcat tggtgggcga tcaatatatt gtgagcgtgg
     2641 cacataacgg cggttataac aatgttgatt ttggtgcgga gggaagcaat cccgatcagc
     2701 accgtttttc ttaccaaatt gtgaaaagaa ataattataa agcagggact aaaggccatc
     2761 cttatggcgg cgattatcat atgccgcgtt tgcataaatt tgtcacagat gcagaacctg
     2821 ttgagatgac cagttatatg gatgggtgga aatataccga tcaaaataat tatcctgacc
     2881 gtgttcgaat cggagcaggc agacaatatt ggcggtctga tgaagatgaa cccaataacc
     2941 gcgaaagttc atatcatatt gcaagtgcgt attcttggct cgttggtggc aatacctttg
     3001 cacaaaatgg atcaggtggt ggcacagtca acttaggtag tgaaaaaatt aaacatagcc
     3061 catatggttt tttaccaaca ggaggctcat ttggcgacag tggctcacca atgtttatct
     3121 atgatgccca aaagcaaaag tggttaatta atggggtatt gcaaacaggc aacccctata
     3181 taggaaaaag caatggcttc cagctagtgc gtaaaaattg gttttatgac gaaattttta
     3241 ccggagatac ccattcagta ttctacgaac cacatcaaaa tgggaaatac acttttcacg
     3301 acaataataa tggcacagga aaaatcaatg ccaaacatga acacaattct ctgcctaata
     3361 gattaaaaac acgaaccgtt caattgttta atgtttcttt atccgagaca gcaagagaac
     3421 ctgtttatca tgctgcaggt ggtgtcaaca gttatcgacc cagactgaat aatggagaaa
     3481 atatttcctt tattgacgaa gggaaaggcg aattgatact taccagtaac atcaaccaag
     3541 gtgctggagg attatatttc caaggagatt ttacggtctc gcctgaaaac aacgaaacgt
     3601 ggcaaggtgc gggcgttcat atcagtgaag acagtaccgt tacttggaaa gtaaacggcg
     3661 tggcaaacga ccgcctgtcc aaaatcggca aaggcacgct gcacgttcaa gccaaagggg
     3721 aaaaccaagg ctcgatcagc gtgggcgacg gtacagtcat tttggatcag caggcagacg
     3781 ataaaggcaa aaaacaagcc tttagtgaaa tcggcttggt cagcggcagg ggtacggtgc
     3841 aactgaatgc cgataatcag ttcaaccccg acaaactcta tttcggcttt cgcggcggac
     3901 gtttggattt aaacaggcat tcgctttcgt tccaccgtat tcaaaatacc gatgaagggg
     3961 cgatgattgt caatcataat gccacaacaa catccaccgt taccattaca gggaatgaaa
     4021 gtattacaca accgagtggt aagaatatca atagacttaa ttacagcaaa gaaattgcct
     4081 acaacggttg gtttggcgag aaagatgcga ccaaaacgaa tgggcggctc aaccttgttt
     4141 accagcccgc cgcagaagac cgcaccctgc tgctttccgg cggaacaaat ttaaacggta
     4201 acatcacgca aacaaacggc aaactgtttt tcagcggcag accaacaccg cacgcctaca
     4261 atcatttaaa caaccattgg tcgcaaaaag agggcattcc gcacggagaa atcgtgtggg
     4321 acaacgactg gattaaccgc acgtttaaag cggaaaattt ccatattcag ggcgggcagg
     4381 cggtgatttc ccgcaatgtt gccaaagtgg aaggcgattg gcatttgagc aatcacgccc
     4441 aagcagtttt cggtgtcgca ccgcatcaaa gccacacaat ctgtacacgt tcggactgga
     4501 cgggtctgac aaattgtgtc gaaaacacca ttaccgacga taaagtgatt gcttcattga
     4561 ccaataccga catcagcggc aatgtcgatc ttgccgatca cgctcattta aatctcacag
     4621 ggcttgccac gctcaacggc aatctgaccg caggcggaga cacgcactat gaggttacgc
     4681 acaacgccac ccaaagaggc aaccttagcc tcgtgggcaa tgcccaagca acatttaatc
     4741 aagccacatt aaacggaaac acatcggctt cgggcaatgc ttcatttaat ctaagcaaca
     4801 acgccgtaca aaacggcagt ctgacgcttt ccggcaacgc taaggcaaac gtaagccatt
     4861 ccgcactcaa cggcaatgtc tccctagccg ataaggcagt attccatttt gaaaacagcc
     4921 gccttaccgg acaaatcagc ggcggcaagg atacggcatt acacttaaaa gacagcgaat
     4981 ggacgctgcc gtcaggcacg gaattaggca atttaaacct tgacaacgcc accattacac
     5041 tcaattccgc ctatcgccac gatgctgcag gcgcgcaaac cggcagtgtg tcagacacgc
     5101 cgcgccgccg ttcgcgccgt tcgcgccgtt cgcgccgttc cctattatcc gttacaccgc
     5161 caacttcggc agaatcccgt ttcaacacgc tgacggtaaa cggcaaattg aacggtcagg
     5221 gaacattccg ctttatgtcg gaactcttcg gctaccgcag cgacaaattg aagctggcgg
     5281 aaagttccga aggcacttac accttggcgg tcaacaatac cggcaacgaa cctgcaagcc
     5341 tcgaacaatt gacggtagtg gaaggaaaag acaacaaacc gctgtccgaa aaccttaatt
     5401 tcaccctgca aaacgaacac gtcgatgccg gcgcgtggcg ttaccaactc atccgcaaag
     5461 acggcgagtt ccgcctgcat aatccggtca aagaacaaga gctttccgac aaactcggca
     5521 aggcagaagc caaaaaacag gcgggaaaag acaacgcgca aagccttgac gcgctgattg
     5581 cggccgggcg cgatgccgtc gaaaagacag aaagcgttgc cgaaccggcc cggcaggcag
     5641 gcggggaaaa tgtcggcatt atgcaggcgg aggaagagaa aaaacgggtg caggcggata
     5701 aagacagcgc cttggcgaaa cagcgcgaag cggaaacccg gccggctacc accgccttcc
     5761 cccgcgcccg ccgcgcccgc cgggatttgc cgcaaccgca accccaaccg caaccccaac
     5821 cgcagcccca accgcagcgc gacctgatca gccgttatgc caatagcggt ttgagtgaat
     5881 tttccgccac gctcaacagc gttttcgccg tacaagacga attagaccgc gtatttgccg
     5941 aagaccgccg caacgccgtt tggacaagcg gcatccggga caccaaacac taccgttcgc
     6001 aagatttccg cgcctaccgc caacaaaccg acctgcgcca aatcggtatg cagaaaaacc
     6061 tcggcagcgg gcgcgtcggc atcctgtttt cgcacaaccg gaccgaaaac accttcgacg
     6121 acggcatcgg caactcggca cggcttgccc acggcgccgt tttcgggcaa tacggcatcg
     6181 acaggttcta catcggcatc agcgcgggcg cgggttttag cagcggcagc ctttcagacg
     6241 gcatcggagg caaaatccgc cgccgcgtgc tgcattacgg cattcaggca cgataccgcg
     6301 ccggtttcgg cggattcggc atcgaaccgc acatcggcgc aacgcgctat ttcgtccaaa
     6361 aagcggatta ccgctacgaa aacgtcaata tcgccacccc cggtctttcg ttcaaccgct
     6421 accgcgcggg cattaaggca gattattcat tcaaaccggc acaacacatt tccatcacgc
     6481 cttatttgag cctgtcctat accgatgccg cttcgggcaa agtccgaaca cgcgtcaata
     6541 ccgccgtatt ggctcaggat ttcggcaaaa cccgcagtgc ggaatggggc gtaaacgccg
     6601 aaatcaaagg tttcatgctg tccctccacg ctgccgccgc caaaggcccg caactggaag
     6661 cgcaacacag cgcgggcatc aaattaggct accgctggta accgccggat atgccgaaag
     6721 gggtctgacg atgccaccgt gcgctgtcaa accctttttc tgccgccgcc ttgtgcctgc
     6781 tccattgtct gataaccgtc aaattgattt ttagcccatg tttggtgggt cggggaaatc
     6841 tatatcttcg tccgtgccga aatagtctga gacctttgca aaattccttt ccctcccgac
     6901 agccgaaacc caaacacagg ttttcgtcta ttttcgcccc aaatacctcc taattctacc
     6961 caaatacccc cttaatcctc cacggacacc cgataatcag gcatccgggc tgctttttag
     7021 gcggcagcgg gcgcacttag cctgttggcc gctttcaaaa ggttcaaaca catcgccttc
     7081 agatggcttt gtgcactcac tttgctcagc ccgaaatagg ctgcccgcgc atagcggaat
     7141 tt
//
LOCUS       DBBZXU010000100         7061 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.100, whole genome shotgun sequence.
ACCESSION   DBBZXU010000100 DBBZXU010000000
VERSION     DBBZXU010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 7061)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7061)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7061
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.100"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(311..2107)
                     /locus_tag="ACJJDE_001737"
     CDS             complement(311..2107)
                     /locus_tag="ACJJDE_001737"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017146933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HGG7541626.1"
                     /translation="MNTVSNYLSALREAMKAQGLDALVIPSADPHLSEYLPEHWQARR
                     ELSGFTGSVGTFVVTADEAGVWVDSRYWEQAAKQLAGSGIELQKSGQVPPYNEWLAAN
                     LPENAAVGILSDMVSLTGKRTLAQSLAAKNIRIEHPDGLLDQVWTSRPAIPAETVFVH
                     DPAYVSETAAEKLARVRAVMAEKGADYHLVSSLDDIAWLTNLRGSDVPFNPVFVSFLL
                     IGKDNAVLFTDRCRLNAEAAAALQTAGITVEPYAQVADKLAQIGGALLIEPNKTAVST
                     LVRLPESVRLIEGINPSTLFKSCKSEADIARIREAMEHDGAALCGFFAEFEDIIGNGG
                     SLTEIDVDTMLYRHRSVRPGFISLSFDTIAGFNANGALPHYSATPESHSTISGNGLLL
                     IDSGAQYKGGTTDITRVVPVGTPSAEQKSDNTLVLKAHIALAEAVFPENIPSPLIDAI
                     CRKPLWQAQCDYGHGTGHGVGYFLNVHEGPQRIAFAAPATPETAMKKGMVTSIEPGLY
                     RPGKWGIRIENLAANQAVAAPQETEFGSFLCFETLTLCPIDTRLMDTALMTDGEIDWV
                     NRYHAEVRRRLEPLTEGAAKAWLIKRTEPLAR"
     gene            2565..3818
                     /locus_tag="ACJJDE_001738"
     CDS             2565..3818
                     /locus_tag="ACJJDE_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0046873 - metal ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NRAMP family divalent metal transporter"
                     /protein_id="HGG7541627.1"
                     /translation="MSEQHISTWKSKINALGPGIMMASAAVGGSHLIASTQAGALYGW
                     QIALIIILTNLFKYPFFRFSAHYTLDTGKSLIEGYAEKSRVYLWVFLILCILSATINA
                     GAVAIVTAAIVKMAIPSLMFDAGTVAALIMASCLIILVSGRYRALDRVSKIIIVTLSI
                     ATLAAAGIAMSRGMQMQPDFIEPTPWTLAGLGFLIALMGWMPAPIEISAINSLWVTEK
                     QRINPSEYRDGIFDFNVGYIASAVLALVFLALGAFVQYGNGEAVQMAGGKYIGQLINM
                     YAVTIGGWSRPLVAFIAFACMYGTTITVVDGYARAIAEPVRLLRGKDKTGNAEFFAWN
                     IWVAGSGLAVIFWFDGVMANLLKFAMIAAFVSAPVFAWLNYRLVKGDEKHKLTSGMNA
                     LALAGLIYLTGFTVLFLLNLAGMFK"
     gene            3973..5484
                     /gene="lysS"
                     /locus_tag="ACJJDE_001739"
     CDS             3973..5484
                     /gene="lysS"
                     /locus_tag="ACJJDE_001739"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009313040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HGG7541628.1"
                     /translation="MSEQNHPQTEPQLDENQIIALRREKLHNIRQQRNAYPNDFKRDS
                     FAADLHAQYGEIGKEELDPQGIPVKVAGRMMLKRQMGKASFATIQDVSGQIQLYLNNK
                     GVSQEVLDDFNHWDLGDIVGAEGTLFKTNHGELTVRVSDIRLLSKSLRPLPDKHKGLS
                     DQETKYRQRYVDLIANEESRNTFIKRSQIIQSVRNFMVGEHYLEVETPMMHPIPGGAT
                     AKPFVTHHNALDIPLYLRIAPELYLKRLVVGGLERVFEINRSFRNEGMSVRHNPEFTM
                     IEFYEAFSDYERMMQMAEDIIRNASRTVNGTANITYNGKEVDLESPFERLTILEAIKK
                     YNPHYTDEQLNDAEWLKKEIVKHGESLPPSPGIGSLQLALFEGCAEGKLWNPTFIIDY
                     PVEVSPLARASDTKQGLTERFELFVVGRELANGYSELNDPEDQAERFKSQVAQKDAGD
                     DEAMHYDADYIRAMEFGLPPTGGCGIGIDRLVMLLTDSQTIRDVILFPQMRPE"
     gene            complement(5668..5898)
                     /locus_tag="ACJJDE_001740"
                     /pseudo
     CDS             complement(5668..5898)
                     /locus_tag="ACJJDE_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311460.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(5902..6780)
                     /locus_tag="ACJJDE_001741"
     CDS             complement(5902..6780)
                     /locus_tag="ACJJDE_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF723 domain-containing protein"
                     /protein_id="HGG7541629.1"
                     /translation="MARRSKTFEEAAAEVEERFGHRGIKLVEFEGTAKPCVINCPKHG
                     NQTCSRYSNMFIGSSWGCPSCGNEQAAKAGIATLRKNHIALEMLKQAVTGMTKQERIT
                     TQAYNEMTKSVAGSNSIVLNDVQGDTTINNHHTHTHNHSDADGKALSMRLTPRPLLSD
                     RQAAAFARTGKLTGSFDLFASVVAPSQYTFAVAMPDTSMSPVIEKGDLLVVEPRMRPA
                     DEDIVLIELSDKRLVVAHLVIDIAGRMLIYQTGRPSEALDLPEGSVILGVVLEVKKRF
                     MSAAQARRRVDSDYRP"
     gene            complement(6810..>7061)
                     /locus_tag="ACJJDE_001742"
     CDS             complement(6810..>7061)
                     /locus_tag="ACJJDE_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7541630.1"
                     /translation="QGIYTHELVNLLFEQPYTRIANLEAAGIAKRQTASKYLKELSDI
                     GVLQEIAIGRDKLFIHPRLMELLRGEGNSFTSFQSLVKA"
BASE COUNT         1548 a         1810 c         1993 g         1710 t
ORIGIN      
        1 aatgacggtt cgggcattcc ttaaatcacc cgtgtatcgc tgtaaatctt agagatggcg
       61 gaatatagcg gattaacaaa aaccagtacg gcgttgtcgc gccttagctc aaagagaacg
      121 attctctcag gtgctgaagc accgagtgaa tcggttccgt actattcgta ctgtctgcgg
      181 cttcgccgcc ttgtcctgat ttttgttaat ccactatatt tgcttgcggc aagatgaaaa
      241 cggtgcggga tgttttagga aaccaatgcc gtctgaaggc tttcagacgg cattttttgc
      301 gccgtgctgt ttaacgcgcc agcggttcgg tgcgtttgat cagccacgct tttgccgcgc
      361 cttcggtcag cggctcgagg cggcggcgga cttcggcgtg gtagcggttg acccagtcga
      421 tttcgccgtc ggtcatgagg gcggtgtcca tcaggcgtgt atcgatgggg cagagggtca
      481 gggtttcaaa acagaggaag ctgccgaatt cggtttcttg aggggcggcg acggcttggt
      541 tggcggcaag gttttcaatg cggatgcccc attttcccgg gcggtagagt ccgggttcga
      601 tggaggtaac catgcctttt ttcatggcgg tttcgggcgt ggcgggggcg gcgaaggcga
      661 tgcgctgcgg gccttcgtgg acgttgagga aatagcctac gccgtgtccg gtgccgtggc
      721 cgtagtcgca ttgcgcctgc cacaggggtt tgcggcaaat cgcatcaatc agcggcgagg
      781 ggatgttttc ggggaatacg gcttcggcaa gcgcgatatg ggctttgaga acgagggtgt
      841 tgtcgctttt ttgttcggca ctcggcgtgc cgacagggac gacgcgggtg atgtcggtcg
      901 tgccgccttt gtattgcgcg ccggagtcga tgagcaaaag cccgttgccg ctgatggtgc
      961 tgtggctttc gggcgttgcg ctgtaatgcg gcagtgcgcc gttggcgttg aagcctgcga
     1021 tggtgtcgaa actcaatgaa atgaagcctg ggcgcacgct gcggtggcga taaagcatgg
     1081 tgtccacgtc gatttcggtc aggctgccgc cgttgccgat gatgtcttca aactcggcga
     1141 agaaaccgca caacgccgcg ccgtcgtgtt ccatcgcttc gcggatgcgg gcgatgtcgg
     1201 cttcggattt gcaggatttg aacagcgtgg atgggttgat tccctcgata aggcgcacgc
     1261 tttcgggcag gcgcacaagc gtgctgacgg cggttttgtt cggttcgata agcagcgcgc
     1321 cgccgatttg cgcgagtttg tcggcaactt gggcataagg ttcgaccgtg atgcctgcgg
     1381 tttgcagcgc ggcggcggct tcggcgttca gacggcatcg gtcggtaaac aggacggcgt
     1441 tgtctttgcc aatcagcagg aaggacacga aaacagggtt gaaaggtacg tcgctgccac
     1501 gcaggttggt cagccaggcg atgtcgtcga gcgaggaaac caagtggtaa tccgcgcctt
     1561 tttccgccat cacggcgcgc acgcgggcga gtttttcggc ggcggtttcg gagacgtagg
     1621 cggggtcgtg gacgaacacg gtttcggcag gaatggccgg gcggcttgtc cacacttggt
     1681 caagcaggcc gtcggggtgt tcgatgcgga tgtttttggc ggcgagcgat tgcgctaaag
     1741 tgcgtttgcc ggtgagcgag accatatcgg aaaggatgcc gacggcggcg ttttcgggca
     1801 ggtttgccgc gagccattcg ttatacggcg gcacttgccc gcttttttgc agttcgatgc
     1861 cgctgcccgc aagctgcttg gcggcttgtt cccaatagcg gctgtccacc catacgcccg
     1921 cttcgtcggc ggtaacgacg aatgtgccga ccgagccggt aaagcccgac aattcgcgcc
     1981 gcgcctgcca atgttcgggc aggtattcgg acaggtgggg gtcggcggaa gggatgacga
     2041 gtgcatccaa gccttgcgcc ttcatggctt cgcgcaatgc ggacaggtaa ttcgatacgg
     2101 tattcataat aattcctcca atcgggtttt gcggcttcag acggcatgga cggaaatctg
     2161 aaatgccgtc tgaaaaacat aaccatctta tcaaatcgcc agcctgctgc aaaacggacg
     2221 ggctgatcgg atggtgcgtg tttgcgcgaa aaaagcgatg taaggttgtt tgttgtaaaa
     2281 ttttaggcat aaaatgtcgt ttcatgcctt tttttggaag taatacggaa aatatagtca
     2341 agtttgagca tgaagttcta atagtgtgtg ttggcaggta tttggattac gttacaatac
     2401 gcgctttcat caaaatttcc ctaccgggcg gtatcctgtt tttgaagacg gtaggatttg
     2461 ggtttgtttg ggggcaatcc cgcccaaatt ggagcaatag atagggctgt gtccgaatat
     2521 gcggctctgt gtgttgaaac acggttaaaa atacggaaga ctttatgtcc gaacaacata
     2581 tttcgacttg gaaaagtaaa atcaacgcat tgggaccagg gattatgatg gcttcggcgg
     2641 cggtcggcgg ttcgcacctg attgcctcga cgcaggcggg cgcgctttac ggctggcaga
     2701 tcgcgctcat catcatcctg accaacctct tcaaataccc gtttttccgc ttcagcgcgc
     2761 attacacgct ggacacgggc aagagcctga ttgaaggtta tgccgagaaa agccgcgttt
     2821 atttgtgggt attcctgatt ttgtgcatcc tctccgccac gattaacgcg ggcgcggtcg
     2881 ccattgtcac cgccgccatc gtcaaaatgg cgattccctc gctgatgttt gatgccggca
     2941 cggttgccgc cttgattatg gcatcctgcc tgattatttt ggtgagcgga cgttaccgcg
     3001 ctttggatcg cgtttccaaa atcatcatcg ttactttgag tatcgccacg cttgccgccg
     3061 ccggcatcgc tatgtcgcgc ggtatgcaga tgcagccgga ctttatcgag ccgacaccgt
     3121 ggacgcttgc cggtttgggc ttcctgatcg cgctgatggg ctggatgcct gcgccgattg
     3181 aaatttccgc catcaattct ttgtgggtaa ccgaaaaaca acgcatcaat ccttccgaat
     3241 accgcgacgg gatttttgat ttcaacgtcg gttatatcgc cagtgcggtt ttggctttgg
     3301 ttttccttgc actgggcgcg tttgtgcaat acggcaacgg cgaagcagtg cagatggcgg
     3361 gcggcaaata tatcgggcaa ttgatcaata tgtacgccgt taccatcggc ggctggtcgc
     3421 gcccgctggt ggcgtttatc gcgtttgcct gcatgtacgg cacgacgatt accgttgtgg
     3481 acggctatgc ccgtgccatt gccgaacccg tgcgcctgct gcgcggaaaa gacaaaacgg
     3541 gcaacgccga attctttgcc tggaatattt gggtggcggg cagcggtttg gcggtgattt
     3601 tttggtttga cggcgtaatg gcgaatctgc tcaaatttgc gatgattgcc gcttttgtgt
     3661 ccgcccctgt gtttgcctgg ctgaattacc gtttggtcaa aggtgatgaa aaacacaaac
     3721 tcacatcagg tatgaatgcc cttgcattgg caggcttgat ttatctgacc ggttttaccg
     3781 ttttgttctt attgaatttg gcgggaatgt tcaaatgata acgatgccgt ctgaaaccgc
     3841 aaaccgcttt cagacggcat tgtcgcgttt atggaaaaaa atgccgacat cgcgtaaaat
     3901 atgcgcaaat tttgtgattc ggtcaggtcg tctgaaacag attgcgcctg atttattttt
     3961 tcggaaaacc ctatgagcga acaaaaccat ccgcaaaccg agccgcagtt ggacgaaaac
     4021 caaatcatcg ccctgcgccg cgaaaaactg cacaacatcc gccaacagcg caacgcctat
     4081 cccaacgact tcaaacgcga cagcttcgcc gccgatttgc acgcccaata cggcgaaatc
     4141 ggcaaagaag aactcgatcc gcaaggcatt cccgtcaaag tggccggccg catgatgctg
     4201 aagcgtcaaa tgggcaaggc gagctttgcc accattcaag acgtgtccgg gcaaatccag
     4261 ctttatctga acaacaaagg cgtgagccaa gaagttttgg acgacttcaa ccattgggat
     4321 ttgggcgaca tcgtcggcgc ggaaggcact ttgttcaaaa ccaaccacgg cgaactgacc
     4381 gtacgcgtgt ccgacatccg cctgttgtcc aaatccttgc gtccgctgcc ggacaaacac
     4441 aaaggcttga gcgatcagga aaccaaatac cgccaacgct atgtcgattt gattgccaac
     4501 gaagaatcgc gcaatacctt tatcaaacgc agccaaatca tccaatccgt gcgtaatttt
     4561 atggtgggcg agcattatct cgaagtcgaa accccgatga tgcacccgat tcccggcggc
     4621 gcgacggcaa aacccttcgt tactcatcac aatgccttag atattccgct ttacctgcgt
     4681 atcgcgcctg agctgtattt gaaacgcctg gttgtcggcg gcttggaacg cgtgtttgaa
     4741 atcaaccgca gcttccgcaa cgaaggcatg tccgtgcgcc acaaccccga atttacgatg
     4801 attgaatttt acgaagcctt ctccgactac gaacgtatga tgcagatggc ggaagacatc
     4861 atccgcaacg catcgcgcac agtaaacggt acggcaaaca tcacttacaa tggcaaagaa
     4921 gtcgatttgg aaagcccgtt cgagcgtctg accatcctcg aagccatcaa aaaatacaat
     4981 ccgcactaca ccgacgagca gttgaacgat gcggaatggc tgaaaaaaga aatcgtcaaa
     5041 cacggtgaaa gcctgccgcc gtccccgggc atcggcagcc tgcaactcgc gctgtttgaa
     5101 ggttgcgccg agggcaagct gtggaacccg actttcatca tcgattaccc ggtcgaagtt
     5161 tccccgttgg cgcgcgcttc ggataccaaa caaggtctga ccgaacgttt cgaattgttc
     5221 gttgtcggcc gcgaactggc aaacggctat tcagaattga atgaccctga agaccaagcc
     5281 gaacgcttca aatcgcaagt cgcacaaaaa gacgcgggcg acgacgaagc catgcattac
     5341 gatgccgact acatccgcgc gatggagttc ggtctgccgc cgacaggcgg ttgcggcatc
     5401 ggtatcgacc gcttagtgat gctgctgacc gattcgcaaa ccatccgcga tgtgattctg
     5461 tttccgcaga tgcgccccga gtaatcataa aaacagttga aatggcaatg ccgtctgaac
     5521 ctgattggat tcagacggca ttttgtatgg caggattgat agtgaattaa caaaaatcag
     5581 gacaaggcgg cgagccgcag acagtacaaa tagtacggaa ccaattcact tggtgcttca
     5641 gcaccttaga gaatcgttct ctttgagcta aggcgagcca acgctgtacc ggtttaaatt
     5701 taattcacta tattcggttt ccaactgacc gacccattct gacaaggccg acaggcgttg
     5761 ttcggatttc gccacgaacg ggttttcggt atcccacgcg tagcctgcca aaatcgaaga
     5821 aagcatacgg ctgatttccg ggctgcggtc gggcgcgtac acgacgtttt ggaagcggaa
     5881 atcgtaccaa ccgtccacac atcaggggcg gtaatccgaa tcaacacgcc ttcttgcctg
     5941 tgcggcggac ataaaccgtt ttttgacctc cagcaccaca cctaaaatca cgctgccttc
     6001 gggcaggtcg agggcttcag acggcctgcc cgtctgataa atcagcatcc tgcccgcaat
     6061 atcgataaca aggtgcgcga cgaccagccg cttgtcggac agttcaatca gtacgatgtc
     6121 ttcgtccgca gggcgcatac gcggctcgac caccagcaaa tccccctttt cgataaccgg
     6181 cgacatggac gtgtcgggca tggcaacggc aaacgtgtac tgcgaggggg cgaccaccga
     6241 agcaaacaag tcgaaactgc ctgtgagttt gcctgtacgg gcgaaagccg ccgcctgacg
     6301 gtctgacaac agggggcgtg gtgtgagcct catcgacagt gctttgccgt cggcatcgct
     6361 gtggttgtgc gtatgcgtat gatggttgtt gatggtcgta tcgccttgga catcgttaag
     6421 gactatgctg tttgaacctg ccacggattt ggtcatctca ttgtaggctt gcgtcgtgat
     6481 gcgctcttgc ttggtcatac ctgttacagc ctgtttcagc atttctaacg ctatgtgatt
     6541 cttcctaagg gtcgctatac cggcttttgc agcttgctca ttaccacaag aggggcaacc
     6601 ccagctactt cctatgaaca tattggagta cctcgaacag gtttggtttc catgtttagg
     6661 gcagttgatt acacacggct tggctgtacc ctcaaactcg accaacttaa tgccacgatg
     6721 accgaaacgt tcctcaacct cagcagcagc ttcttcaaat gtttttgacc ttcttgccat
     6781 attgacctcc ggattattga ttattttggc tatgctttaa cgagggattg gaatgaggta
     6841 aagctgttgc cctctccccg caatagttcc attaggcgcg gatgaatgaa tagtttgtcc
     6901 ctgccgatgg cgatttcttg cagcacacct atgtctgaaa gctctttcag gtacttagag
     6961 gccgtctgcc gtttggctat ccctgccgct tctaggttgg caatgcgtgt atatggctgc
     7021 tcaaacagaa gatttaccag ttcgtgcgtg tagattcctt g
//
LOCUS       DBBZXU010000101         6971 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.101, whole genome shotgun sequence.
ACCESSION   DBBZXU010000101 DBBZXU010000000
VERSION     DBBZXU010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6971
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.101"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1043..2491
                     /gene="gnd"
                     /locus_tag="ACJJDE_001743"
     CDS             1043..2491
                     /gene="gnd"
                     /locus_tag="ACJJDE_001743"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004616 - phosphogluconate dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating NADP(+)-dependent
                     phosphogluconate dehydrogenase"
                     /protein_id="HGG7541631.1"
                     /translation="MKGDIGVIGLAVMGQNLILNMNDCGFKVVAYNRTIGKVDEFLNG
                     AAKGTGIIGAYSLQDLVDKLAKPRKIMMMVRAGSVVDDFIEQLLPLLEEGDIIIDGGN
                     ANYSDTTRRTHYLAGKGILFVGAGVSGGEEGARRGPSIMPGGDKRAWETVKPIFQAIA
                     AKTPHGEPCCDWVGKDGAGHFVKMVHNGIEYGDMQLICEAYQFMKDGLGLSYDEMHRV
                     FAEWNKTELDSYLIEITAAILGYKDEGGEPLVEKILDTAGQKGTGKWTGINALDLGIP
                     LTLISEAVFARCVSSFKEQRVQTGKLFARTVTPVEGGKQEWVEALRQALLASKIISYA
                     QGFMLIREAGESYGWDLDYGNTALLWREGCIIRSAFLSNIRDAYENNPDLVFLGADPY
                     FKNILENCLPAWRKVVAKAVECGIPMPCMASAITFLDGYTTERLPANLLQAQRDYFGA
                     HTYERTDKPRGEFFHTNWTGKGGDTASTTYDI"
     gene            2554..3825
                     /gene="waaA"
                     /locus_tag="ACJJDE_001744"
     CDS             2554..3825
                     /gene="waaA"
                     /locus_tag="ACJJDE_001744"
                     /EC_number="2.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A) 3-deoxy-D-manno-octulosonic acid
                     transferase"
                     /protein_id="HGG7541632.1"
                     /translation="MFQWLYDVLWLLAPIWIRRYLDKRSGSAPAYRAHRDERFGKPYP
                     NPVTGAVWIHAVSVGETRAAQPLIRELRQRFPDAPLLMTQMTPTGRETAQVLFPDAQC
                     RYLPYDKKTWVRQFLREHRPMFGILMETEIWPNLMTECRRAGVPLFLANARLSEKSLS
                     GYLKVRRLIRPAAASLTGCLAQTEADAARLAKLGAASVQVCGNTKYDLMPSEQMKTLA
                     GQFEKRIGGRPVAVCGSTRVYRGEDEAEKLLAAWQQYRGDALLVVVPRHPEHFQTVFE
                     TAKRFGFKVQRRSDGLPVEPDTQVWIGDSMGELYAYYLCADVAFVGGSLVDSGCQNII
                     EPLSCGVPTIFGFSTYNFSEACRHALASGAAVQVESADAWREAVEKNLSAEGGGMQMQ
                     ARVDGFIAQHRGAGARIAEAVWEAVCGHRGR"
     gene            3866..4315
                     /locus_tag="ACJJDE_001745"
     CDS             3866..4315
                     /locus_tag="ACJJDE_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopD family copper resistance protein"
                     /protein_id="HGG7541633.1"
                     /translation="MSIYAVAHIVHLYCAIAFVGGVFFEVLVLSVLHTGRVSCEARRE
                     VEKAMSYRAVRVMPFVVGLLFASGIVMAANRYLPILGEPFATSFGAMLTLKILLAFSV
                     LAHFAIAVVKMARSTLTVGWSKYIHAVVFTHMLLIVFLAKAMFYISW"
     gene            4348..5322
                     /locus_tag="ACJJDE_001746"
     CDS             4348..5322
                     /locus_tag="ACJJDE_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003697776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HGG7541634.1"
                     /translation="MTEYPGIGSPLFYGVFFAAVLVMIALDMFSLKKNGSHKVGVKEA
                     LAWSGLWVAVSCLFAGWLYFKLAGNPGYGAAVAKEKVLEFFTGYILEKSLAVDNIFVF
                     LMIFGYFKVAPQFQHRVLLYGVLGALVLRTVMIFVGAALVRQFEWILYLFGAFLLYTG
                     IHMMKPEGDEKEDLANSRLLNAVKKVVPVGTEFHGEKFFTVENGKKIATPLFLVLVMI
                     ELSDVVFAVDSIPAVFAVTTDPFIVLTSNIFAILGLRAMYFLLADVAERFIFLKYGLA
                     FVLSFIGVKMLVMHWVHIPISVSLSVVFGALGASVLTSLVYTKKQSDK"
     gene            5391..5466
                     /locus_tag="ACJJDE_001747"
     tRNA            5391..5466
                     /locus_tag="ACJJDE_001747"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5424..5426,aa:Lys,seq:ttt)
     gene            5685..6938
                     /gene="murA"
                     /locus_tag="ACJJDE_001748"
     CDS             5685..6938
                     /gene="murA"
                     /locus_tag="ACJJDE_001748"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0019277 - UDP-N-acetylgalactosamine
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HGG7541635.1"
                     /translation="MDKLKISANGPLNGEITVSGAKNAALPLMCAGLLTSGTLRLKNV
                     PMLADVKTTQKLLQGMGARVLTDNISEFEINGGTVNNTCAPYELVRTMRASILVLGPT
                     LARFGEAQVSLPGGCAIGSRPVDQHLKGLEAMGAEIVIEHGYVKAKGKLKGTRVAMDV
                     VTVGGTENLLMAATLAEGTTVLENCAIEPEVVDLAECLVKMGAKISGIGTSTMIVEGV
                     DELHGCEHSVVPDRIEAGTFLCAVAITGGRVVLRNAAPKTMEVVLDKLVEAGAVIEAG
                     DDWIAIDMRQRPKAVDIRTVVHPGFPTDMQAQFMALNAVAEGSCRVVETIFENRFMHV
                     PELNRMGANITTEGNTAFVQGVEQLSGAVVKATDLRASASLVIAGLAARGETVVEQIY
                     HLDRGYENIEKKLGSVGAKIERVSG"
BASE COUNT         1626 a         1678 c         1979 g         1688 t
ORIGIN      
        1 acgaaagtgg gaatctagaa tcccggactt tcagataatc tttgaatatt gctgttattc
       61 taaggtctgg attcccgcct gcgcgggaat gacggcggag cggtttctgt tttttccggt
      121 aaatgccgca atctcaaatc ccgtcattcc cacgaaagtg ggaatctagt tcgttgagtt
      181 tcagttattt agaataaatt ttgaaacttt aatcccgtca ttcccacgaa agtgggaatc
      241 tagaacgtaa aatctcaaga aaccgttttc ccgataagtt tccgtgccga cagacctaga
      301 ttcccgcctg cgcgggaatg acggcagagc ggtttctgtt gctcccgata aattcctaaa
      361 actcaaaatt tcatcattcc cactttcatg ggaatgacgg gatgtaggtt cgtgggaatg
      421 acgcggtaca ggtttccgtt acgtatcccc atccgaaact ttacttatac acaagcaatc
      481 caaagttatc tgactgaaat attgtgagat ttacccgaaa atctcatttt ttccaccact
      541 tatacacaaa ttcggatgcg cactctgccg atatgcagaa ataagacatt catgccgaca
      601 cctgaccatt tccacaagtt ccaaacacac tttcctctca aacctccaca gtattccggt
      661 tcttaaaggc atcggcagcc attcggtaaa gaaaagtagg atgccatctg cacaacaagc
      721 aaactgtcca caaaaactat tcttcatgaa aaacaatcca caggtatgca caaaagggaa
      781 tccgccttac cgacaccctt ttaaaacgga aatcccaatg atttttaaaa taaaaaaaag
      841 ttacccacag aaaatttctc ctatcaatat aatcatcgtt ttattattta aattttatat
      901 tttatttata agccttcagg gaaacgcacg gtaaagcgta aaggcatctt ttcaaaaaat
      961 taaaaagtta aggattgtta aacaagtgta aatcaggtag agttgcggtc gataaattaa
     1021 atctataacg gagcttcctg caatgaaagg cgatattggc gtaatcggtt tggcggttat
     1081 ggggcaaaac ctgattttga atatgaacga ttgcggattt aaggttgtcg cctacaaccg
     1141 aacaatcggt aaggtggacg aatttttaaa cggcgcggca aaagggaccg gtattatcgg
     1201 cgcgtactcc ctgcaagact tggtcgataa gctggcaaaa ccaagaaaaa tcatgatgat
     1261 ggttcgcgca ggttcggtgg ttgacgactt tatcgaacaa ctgcttccgc tgttggaaga
     1321 aggcgacatc attattgacg gcggcaatgc caattactcc gacacgacac ggcggacaca
     1381 ttaccttgcc ggaaaaggga ttttatttgt cggcgcgggc gtatccggcg gcgaagaagg
     1441 cgcgcggcgc ggcccgtcca ttatgccggg cggggataaa cgcgcttggg aaaccgtcaa
     1501 accgattttc caagcgattg ccgccaaaac gccgcatggc gaaccgtgtt gtgactgggt
     1561 cggcaaggac ggcgcgggac attttgtcaa aatggtgcac aacggcatcg aatacggcga
     1621 tatgcagttg atttgcgagg cttaccagtt tatgaaagac ggtttgggat tgtcctacga
     1681 cgaaatgcac cgcgtgtttg ccgagtggaa caaaaccgag ctggattctt atctgattga
     1741 aatcacagcg gcaattttgg gctataagga cgaaggcggt gaaccgctgg tcgagaaaat
     1801 cctcgatacg gcagggcaaa aaggcacggg caaatggacg ggcatcaatg ctttggattt
     1861 gggtattccg ttgacgctga tttccgaagc ggtattcgcc cgctgcgttt cgtcgttcaa
     1921 agaacagcgc gtgcagaccg gcaagctatt cgcccgaacc gttacgcccg tcgaaggcgg
     1981 caaacaagaa tgggttgagg cgttgagaca ggccctgctt gcatccaaaa tcatttccta
     2041 cgcacaaggc tttatgctga tccgcgaagc gggcgaaagc tacggctggg atttggacta
     2101 cggcaacact gcgctgctgt ggcgcgaggg gtgcatcatt cgcagcgcat tcttaagcaa
     2161 tatccgcgac gcgtatgaaa acaatcccga tttggtgttc ttgggtgcgg atccgtattt
     2221 caaaaatatt ttggaaaact gcctgccggc gtggcgcaag gtggttgcca aggcggtcga
     2281 atgcggcatc cctatgccct gcatggcttc ggcgattacg ttcttggacg gctacacgac
     2341 cgaacgtctg cctgccaacc tcttgcaggc acagcgcgac tacttcggcg cgcacactta
     2401 cgagcgcacc gacaaaccgc gcggcgagtt tttccatacc aactggacgg gcaagggcgg
     2461 agataccgct tcgacaacct acgatatttg attccgttgc cgaaatgccg tccgaaccgt
     2521 tcggacggca tttgttttgc aggaaataga aagatgttcc aatggcttta tgatgtattg
     2581 tggctgcttg cgccgatatg gatacggcgt tatttggaca aacgctccgg aagtgcccct
     2641 gcatatcggg cgcatcggga cgagcgtttc ggcaagccgt atccgaatcc cgttaccgga
     2701 gcggtttgga tacacgccgt ttcggtcgga gaaacgcgtg ccgcccagcc cttgatacgc
     2761 gagttgcggc agcgttttcc cgatgcaccg ctgctgatga cgcagatgac cccgacggga
     2821 cgggaaaccg cgcaagttct gtttcccgat gcgcaatgcc gctatcttcc gtatgacaaa
     2881 aaaacgtggg tacggcagtt tttgcgcgaa caccgcccga tgttcggcat tttgatggaa
     2941 accgaaatct ggcccaatct gatgacggag tgccggcgcg cgggtgtgcc gctgtttttg
     3001 gcgaatgcgc ggctgtcgga aaaatcgttg agcggttatc tgaaagtccg ccgcctgatc
     3061 cgtcctgccg ccgcttcgct gacgggttgt ctggcgcaga cggaggcgga tgcggcgcgg
     3121 ttggcgaaat tgggcgcggc atccgtgcag gtgtgcggca ataccaaata cgacctgatg
     3181 ccgtcggaac agatgaaaac gctggcgggg cagtttgaaa aacgcatcgg aggcaggccg
     3241 gttgccgtgt gcggcagcac gcgcgtttat cggggtgaag acgaggcgga aaaactgctg
     3301 gcggcgtggc aacaatatcg cggcgatgcg ctgctggtcg tcgtgccgcg ccatcccgag
     3361 cattttcaga cggtatttga aacggcaaaa cgcttcgggt ttaaggttca gcggcgcagc
     3421 gacggtttgc cggtcgaacc cgatactcag gtgtggatag gcgacagtat gggcgagctg
     3481 tatgcgtatt acctgtgcgc cgatgtcgct tttgtcggcg gcagtctggt cgattcgggt
     3541 tgtcagaaca tcatcgaacc gctttcctgc ggcgttccga cgatattcgg cttttcgacc
     3601 tacaattttt ccgaagcctg ccgacacgcc ttggcatcgg gtgcggcggt tcaagtcgaa
     3661 tcggcggacg cgtggcggga agccgttgaa aaaaacttat ctgctgaggg gggcggaatg
     3721 cagatgcagg cgcgcgtgga cggctttatc gcacaacatc gcggagcggg cgcgagaatc
     3781 gccgaggcgg tatgggaagc ggtatgcgga catcgggggc gatagtgata caatccgtat
     3841 ccgagttttc cggttggagc atcgtatgag tatttatgcc gtcgcgcaca tcgttcatct
     3901 gtattgcgct attgcctttg tcggcggcgt gttttttgaa gtgctggttt tgtccgtcct
     3961 gcatacggga cgggtgtcgt gcgaggcgcg gcgcgaagtg gaaaaggcca tgtcttaccg
     4021 cgccgtcagg gtgatgccgt ttgtggtcgg actgctgttc gccagcggca tcgtgatggc
     4081 ggcaaaccgc taccttccta tattgggtga accgtttgcc acttccttcg gtgcgatgct
     4141 gacgctgaaa atcctgttgg cgttcagcgt gttggcgcac ttcgccatag ccgtcgtcaa
     4201 aatggcgcgt tccacactga cggtcggctg gtcgaaatac atacacgccg tcgtctttac
     4261 ccatatgctg ctgattgtct ttttggcaaa agcgatgttt tatatcagct ggtaacacaa
     4321 ctacatttca aatcaggaga ttgaaccatg acagaatatc ccggtatcgg gtcgccgttg
     4381 ttttacggcg ttttttttgc ggcagtgctg gtcatgattg ccttggatat gttttcgctg
     4441 aagaaaaacg gcagccataa agtcggtgtc aaagaagcct tggcatggag cggcttgtgg
     4501 gttgccgtat cctgcctgtt cgcgggctgg ctgtatttca aactcgccgg caatcccggc
     4561 tacggcgcgg cagtcgcaaa agaaaaagta ttggaattct ttaccggcta cattttggaa
     4621 aaatcgttgg cagtcgacaa tattttcgtg ttcctgatga tattcggcta cttcaaagtc
     4681 gcaccgcagt ttcagcaccg cgtgctgctg tacggcgtat tgggcgcatt ggtattgcgc
     4741 accgtcatga ttttcgtcgg cgcggcactg gttcggcagt ttgagtggat tctgtatctg
     4801 tttggcgcgt tcctgctcta taccggcata cacatgatga agcccgaagg cgatgagaaa
     4861 gaggatttgg caaacagcag gctgctgaat gccgtcaaga aagtcgttcc ggttggcacg
     4921 gaatttcacg gcgagaaatt ttttaccgtc gaaaacggta aaaaaatcgc cacgccgctg
     4981 tttttggtgc tagtcatgat tgaattgagc gatgtcgtgt ttgccgtgga cagcatcccc
     5041 gccgtctttg ccgttaccac cgatccgttt atcgtgctga cttccaatat tttcgctatt
     5101 ttgggcttgc gggcgatgta tttcctgctg gcggatgtgg cggaacgctt tatcttcctg
     5161 aaatacggct tggcattcgt gttgagtttt atcggtgtga aaatgctggt aatgcattgg
     5221 gtgcatatcc cgatttccgt ttcgctgtcg gtcgtgttcg gcgcattggg tgcatcggtg
     5281 ttgacttcat tggtttatac gaaaaaacag tccgataaat aaaatgccgt ctcaacgccg
     5341 acaaaatggt tgacagcatc aggcttgatg tatagaattt cgagcttatc gggtcgttag
     5401 ctcagtcggt agagcagcgg acttttaatc cgttggtcga gcgttcgaat cgctcacgac
     5461 ccaccagata aaacaaaaaa gctgagtttt caaaactcgg ctttttttgt cttccgacaa
     5521 tccttgttcg gaaagcgcgg catttcgtca aattctttgg tgcggcttcc gtatttttcc
     5581 cgaaaatccc ttataattcc gcctctgcaa ccttcatcgg gtgatgcttt atgcgttgtc
     5641 ccgagtattg aaatattaca agtacccacc aggaaagaac aaacgtggac aaactgaaaa
     5701 tctccgcaaa cggcccgctc aacggggaaa taacggtctc gggcgcgaaa aacgcggcat
     5761 tgccgctgat gtgcgcgggt ttgctgacat cgggtacgtt gcgcctgaaa aacgtcccta
     5821 tgctggcaga tgtgaaaacc acgcaaaagc tgcttcaggg gatgggcgcg cgcgttctga
     5881 ccgacaatat cagtgaattt gaaatcaacg gaggtacggt aaacaatacc tgcgcccctt
     5941 acgaattggt cagaaccatg cgcgcctcaa ttttggtact cggccctacg ctggcgcgtt
     6001 tcggtgaggc gcaagtcagt ctgccgggcg gttgtgccat tggttcccgc cctgtcgacc
     6061 agcatttgaa aggcttggaa gcaatgggtg ctgagattgt tatcgaacac ggttacgtca
     6121 aagccaaagg caaactcaaa ggtacgcgcg tggcgatgga tgtcgttacc gtcggcggca
     6181 cggaaaacct gctgatggcg gcgacgctgg cggaaggtac gacggttttg gaaaactgcg
     6241 ccattgagcc tgaagtggtc gatttggcgg aatgcctggt caaaatgggc gcgaaaatca
     6301 gcggcatcgg tacgtccaca atgattgtgg aaggggtgga cgagctgcac ggctgcgaac
     6361 acagcgtcgt ccccgaccgg atcgaggcgg ggacgttcct gtgcgcggtg gcgataaccg
     6421 gtggcagggt ggttttgcgg aatgccgcgc cgaaaacgat ggaagtggtg ttggacaaac
     6481 tggttgaggc aggtgcggtg attgaggcgg gcgacgattg gatcgccatc gatatgcggc
     6541 agcgtccgaa ggcggtggac atccgtacgg tcgtccaccc cggcttcccc acggatatgc
     6601 aggcgcagtt tatggcattg aatgccgtgg cggagggaag ctgccgcgtg gtggaaacga
     6661 tttttgaaaa ccgctttatg cacgtccccg agttgaaccg gatgggggcg aacatcacaa
     6721 ccgagggcaa tacggcattt gtgcagggtg tggaacagct ttccggcgcg gtcgtcaagg
     6781 cgacggattt gcgtgcgtcc gcaagcctcg ttatcgccgg tttggcggcg cgaggcgaaa
     6841 ccgtggtcga acagatttac cacttggatc gcggttatga aaatattgaa aaaaaactcg
     6901 gcagcgtcgg cgcgaaaatc gagcgcgtat ccggctgatc gggttgcgat gccgtctgaa
     6961 gccttcagac g
//
LOCUS       DBBZXU010000102         6969 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.102, whole genome shotgun sequence.
ACCESSION   DBBZXU010000102 DBBZXU010000000
VERSION     DBBZXU010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6969)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6969)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6969
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.102"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(258..896)
                     /locus_tag="ACJJDE_001749"
     CDS             complement(258..896)
                     /locus_tag="ACJJDE_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HGG7541636.1"
                     /translation="MKKINVAPENPQYRIVEIFESLQGEGWNTGMPAVFVRLGKCNLA
                     CGWCDTDYLTFGMMSLSDILGRLKAYAARNIIITGGEPTIQPHLDMLLDMLKAEGYFL
                     CIETNGLNPAPPQIDYVATSPKACYAAKYENSCIETADEVRIVADGDVLAFCENMERK
                     IRAHHYYLSPCEQDGAMNIYDTIRQIGILNSRPDAPVHWQLSVQTHKWAGIE"
     gene            complement(893..1264)
                     /locus_tag="ACJJDE_001750"
     CDS             complement(893..1264)
                     /locus_tag="ACJJDE_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HGG7541637.1"
                     /translation="MKLLSTLLVLLVTAEHFYIAWLEMTQIPSEKAAEIFKLPYEFME
                     QKRVQTLFGNQGLYNGFLGIGLVWSRFAAPDNAVYGATVLFLGFVLIAAAWGAFSSGN
                     KGILVKQGLPAFLAAAAVLAV"
     gene            complement(1533..1955)
                     /gene="queD"
                     /locus_tag="ACJJDE_001751"
     CDS             complement(1533..1955)
                     /gene="queD"
                     /locus_tag="ACJJDE_001751"
                     /EC_number="4.1.2.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HGG7541638.1"
                     /translation="MKITKIFTFDSSHMLDGHDGKCQNLHGHTYKLEITVSDDLVRGG
                     PKDGMVMDFTDLKAIVKQHITDPFDHAFIYHGGNGRESQIAALLEGWNMKTLRLPCRT
                     TAENMAVEMYDRLKNAGLNVCRVKLWETPTSCAEYEGE"
     gene            complement(1962..2477)
                     /locus_tag="ACJJDE_001752"
     CDS             complement(1962..2477)
                     /locus_tag="ACJJDE_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003698058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1543 domain-containing protein"
                     /protein_id="HGG7541639.1"
                     /translation="MPKLHMFYLGGNAGRSNIEVHDIQFAVCDDYREAIPALKAAWFG
                     DADKIHIDGWQVVEWADGYDIAVSEMPKTEMPSEHAPRLYFANVGGYRAGQLAEAHAF
                     GLFTAATPAEAKQKALQTLLTDHVQQHKDNLKDVDNLLALDRIGNFHIRLTPNPHGKP
                     AEIGFQGYLPI"
     gene            complement(2505..3164)
                     /gene="queC"
                     /locus_tag="ACJJDE_001753"
     CDS             complement(2505..3164)
                     /gene="queC"
                     /locus_tag="ACJJDE_001753"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HGG7541640.1"
                     /translation="MSNQQALVIFSGGQDSTTCLIQAIQTYGRENVQAITFQYGQRHA
                     VELERARWIAQDLGIKQTVLDLSLMRQITHNALMDDTAAIETAGNGVPNTFVDGRNAL
                     FLLYAAIYAKGQGIRHIIAGVCETDFSGYPDCRDVFVKSMNVTLNLAMDYDFQIHTPL
                     MYLTKAQTWALADEMGALDYIREQTHTCYNGIVGGCRECPSCILRERGLAEYLESKKA
                     V"
     gene            complement(3368..3554)
                     /locus_tag="ACJJDE_001754"
                     /pseudo
     CDS             complement(3368..3554)
                     /locus_tag="ACJJDE_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003779592.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
     gene            3709..4935
                     /locus_tag="ACJJDE_001755"
     CDS             3709..4935
                     /locus_tag="ACJJDE_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003699499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY family inner membrane protein"
                     /protein_id="HGG7541641.1"
                     /translation="MTFLQRLQGLADNKICAFAWFVVRRFDEERVPQAAASMTFTTLL
                     ALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYINAFREQANRLTA
                     IGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVGISFM
                     VGSVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQAFVGALATA
                     FCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQ
                     GEAFRRGFDSRGRFDDVLKILLLLDAAQKEGKALPVQEFRRHINMGYDELGELLEKLA
                     RYGYIYSGRQGWVLKTGADSIELNELFKLFVYRPLPVERDHVNQAVDAVMMPCLQTLN
                     MTLAEFDAQAKKQQQS"
     gene            complement(4956..5292)
                     /locus_tag="ACJJDE_001756"
                     /pseudo
     CDS             complement(4956..5292)
                     /locus_tag="ACJJDE_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            complement(5317..5451)
                     /locus_tag="ACJJDE_001757"
                     /pseudo
     CDS             complement(5317..5451)
                     /locus_tag="ACJJDE_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            complement(5462..5908)
                     /locus_tag="ACJJDE_001758"
     CDS             complement(5462..5908)
                     /locus_tag="ACJJDE_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541642.1"
                     /translation="MLTKLKILLFLFLFVFVLAINLLFFFFSSDIESFGNYQFEYVYD
                     KGWPANYILVMKDGNEGNFDKIISGLVLEYYKEDDNIYFSYIDGQGFASDSCYYKPEI
                     LYGKIILNKNHIININSMEKNNFLSEDKIMKGTRNWLADPKNKCNI"
     gene            complement(6473..6676)
                     /locus_tag="ACJJDE_001759"
     CDS             complement(6473..6676)
                     /locus_tag="ACJJDE_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541643.1"
                     /translation="MLSLEIQQEGFTIGGGLVLGGCAGAHLARKEPLILTGKTGAGAS
                     AIANASIGYQWTVNLSEPKEGAK"
BASE COUNT         1648 a         1631 c         1775 g         1915 t
ORIGIN      
        1 aatgctgttt cagacggcat ttcgttttcc ctaaccctgc catttgcgcg cactggcaca
       61 gagtatcggc aaggttcaaa agaccatcgg aatttaggaa gccgggcttg tacccaacgg
      121 cggcatctta ttcagtaagg ttccgcctca atcaggcagc ggaaatgtgg gcagtttcac
      181 gcggaagcgg cacacttttc ccatatgtta gacatcggca aaacggtacg ccggcccttt
      241 gagttacact gcttaaacta ctctattccc gcccatttgt gcgtctgcac gctcaactgc
      301 caatgcaccg gcgcgtcggg gcgactgttt aaaataccga tttggcggat ggtgtcgtag
      361 atgttcatcg caccgtcttg ttcgcagggc gaaaggtagt aatgatgcgc gcggatttta
      421 cgttccatgt tttcgcagaa cgcaaggaca tcaccatcgg caacaatccg cacttcgtcg
      481 gctgtttcga tacagctatt ttcatatttg gcggcgtagc aggctttggg gctggtggcg
      541 acatagtcga tttgcggcgg cgcgggattg agtccgttgg tttcgataca gaggaaataa
      601 ccttccgcct tgagcatgtc cagcagcata tcgagatgcg gctggatggt cggttcgccg
      661 ccggtgatga tgatgttgcg ggcggcatag gctttcagac ggcctaagat gtcggacagg
      721 ctcatcatgc cgaatgtcaa ataatcggta tcacaccagc cgcaggcgag gttgcatttg
      781 cccaagcgga cgaaaacggc gggcatgccc gtgttccagc cttcgccttg caggctttca
      841 aagatttcga cgatgcggta ttggggattt tcgggggcaa cattgatttt tttcataccg
      901 ccaacaccgc cgccgctgcc aaaaatgcgg gcaaaccttg tttgacgagt atgcctttgt
      961 tgccggaaga gaacgcgccc cacgcggcgg caatcaggac gaagccgaga aacagtaccg
     1021 ttgcgccgta caccgcgtta tccggagcgg caaaccgcga ccacaccagc ccgatgccga
     1081 gaaagccgtt atacagccct tggttgccga acagggtctg cacgcgcttt tgttccataa
     1141 attcataagg cagcttgaat atttccgccg ctttttcgct gggaatctgc gtcatttcaa
     1201 gccaggcgat gtagaaatgt tcggcggtga caaggaggac taagagggtg gagagaagtt
     1261 tcatgggtat tccttttaat gggtgtattt gatatggagg gtcgtctgaa aaaacgggga
     1321 atccgtacag gagaaaaaac cgttttacgg taaattcaaa taaggacgct ctaaaccgtc
     1381 ctttccgcgc aggcgggaat ccaaagattt ggaattgctg caatttttaa atattcctga
     1441 aaaaccaagg tctggattcc cgcctgcgcg ggaatgacgc ggttgggcat gtcttattgg
     1501 aatttactat atcgatacgt tcaagatatt ccctactccc cttcatactc cgcacacgat
     1561 gtcggcgttt cccacaattt gacgcggcac acgttcagcc ccgcgttttt cagacggtcg
     1621 tacatttcga ccgccatatt ttcggcagtg gtgcggcagg gcaggcgcag ggttttcatg
     1681 ttccagcctt ccaagagtgc ggcgatttga gattcgcgcc cgttgccgcc gtggtagatg
     1741 aaggcgtggt cgaaggggtc ggtaatgtgt tgtttgacaa tggctttcaa gtcggtaaag
     1801 tccatcacca taccgtcttt cggcccgcct ctgacgaggt cgtctgaaac ggtgatttcg
     1861 agtttgtagg tatgcccgtg caggttttgg catttgccgt catgcccgtc gagcatatga
     1921 gaggagtcga aggtgaagat tttggtgatt ttcatgggtt ctcaaatggg caaatagcct
     1981 tgaaagccga tttcggcggg tttgccgtgc ggattcgggg tcaggcggat atggaaattg
     2041 ccgatgcggt cgagcgcaag caggttgtcc acgtctttta agttgtcttt atgttgctga
     2101 acatggtcgg tcaacagggt ttgcagggct ttttgtttgg cttcggcagg cgtggcggcg
     2161 gtgaacagcc cgaacgcgtg cgcctcggca agctgccccg cgcgataacc gccgacattg
     2221 gcaaaataca ggcgcggggc gtgttcagac ggcatttccg ttttgggcat ttcggatacg
     2281 gcgatgtcgt aaccgtccgc ccattcgaca acctgccaac cgtcgatgtg gattttgtcc
     2341 gcatcgccga accatgcggc tttgagtgcg gggatggctt cgcggtagtc gtcgcacacg
     2401 gcaaattgga tgtcgtgcac ttcgatattc gacctgccgg cattgccgcc gaggtaaaac
     2461 atatggagct tgggcatatc gtattcctta tggtttgcgc gtgttcagac ggccttttta
     2521 ctttccagat attccgccag cccgcgttcg cgcaagatac agctcgggca ttcgcggcag
     2581 ccgccgacga tgccgttata gcaggtgtgg gtttgctcgc ggatatagtc cagcgcgccc
     2641 atttcgtccg ccaacgccca agtttgcgcc ttggtcagat acatcagcgg cgtgtggatt
     2701 tgaaaatcat agtccatcgc caaattaagg gtaacgttca tcgatttgac aaacacgtcg
     2761 cggcagtcgg gatagccgga gaagtcggtt tcgcacacgc ccgcgatgat gtgccgtatc
     2821 ccctgccctt tggcgtaaat cgcggcgtaa agcaggaaaa gcgcgttgcg cccgtccaca
     2881 aaggtattgg gaacaccgtt gccggcggtt tcgatggcgg cggtatcgtc catcagggca
     2941 ttgtgcgtaa tctgccgcat caggctcaag tcgagtacgg tttgtttgat gcccaaatcc
     3001 tgcgcaatcc agcgggcgcg ttccagctcg acggcatggc gttgcccgta ttggaaagtg
     3061 atggcttgga cgttttcgcg cccgtaggtt tggattgcct gaatcaggca ggtggtcgaa
     3121 tcctgaccgc ccgaaaagat gaccaaggct tgttggtttg acatatcgaa tcctagtttt
     3181 ggtaacgcgg gaggtttgcg aaccgcgaag ttgaacagta aagatgcgga ttatacaggc
     3241 aaacgcgttc agacggcatc tgaacgccat gccgtctgaa cacgcggctt atgccgactt
     3301 gacggcgagt tccgccaagc gtttgctttg tgcgaaggcg atattgtttt cttcggcggt
     3361 caggacggga gccgctgtcg ggaatatctt ttttgacggc ttcgcagacg gcggagactt
     3421 tggggacggt gcgcaatacg gcttcgcaac cttcaacgct gtcgatgccg cgagcgattc
     3481 ggcgggcggg attgcggggg ctgccgtttt gggaatagta gaggacgagg attttgaggg
     3541 ggatttgggt tcatgggcgg attccgttaa aatggttcgg tcttcaaacg gcataacagt
     3601 tgttccgatg ccgtctgaaa cagccgcagt tcaggcattt gttcctgacg gcaaacttgg
     3661 ctataacatc gggcatcaat gcccaactta ctgaccgggc aagaaattat gaccttttta
     3721 caacgtttgc aaggtttggc agacaataaa atctgtgcgt ttgcatggtt cgtcgtccgc
     3781 cgctttgatg aagaacgcgt accgcaggcg gcggcaagca tgacgtttac gacgctgctg
     3841 gcactcgtcc ccgtgctgac cgtgatggtg gcggtcgctt cgattttccc cgtgttcgac
     3901 cgctggtcgg attcgttcgt ctccttcgtc aaccaaacca ttgtgccgca gggcgcggac
     3961 atggtgttcg actatatcaa tgcgttccgc gagcaggcga accggctgac ggcaatcggc
     4021 agcgtgatgc tggtcgttac ctcgctgatg ctgattcgga cgatagacaa tacgttcaac
     4081 cgcatctggc gggtcaattc ccagcgtccg tggatgatgc agtttctcgt ctattgggct
     4141 ttactgacgt tcgggccgct gtctttgggc gtgggcattt cctttatggt cggctcggta
     4201 caggatgccg cgcttgcctc aggtgcgccg cagtggtcgg gcgcgttgcg aacggcggcg
     4261 acgctgacct tcatgacgct tttgctgtgg gggctgtacc gcttcgtgcc aaaccgcttc
     4321 gttcccgcgc ggcaggcgtt tgtcggggct ttggcaacag cgttttgtct ggaaaccgcg
     4381 cgctccctct tcacttggta tatgggcaat ttcgacggct accgctcgat ttacggcgcg
     4441 tttgccgccg tgccgttttt tctgttgtgg ctgaacctgt tgtggacgct ggtcttgggc
     4501 ggcgcggtgc tgacttcttc actctcctac tggcagggag aagcgttccg caggggcttc
     4561 gactcgcgcg gacggtttga cgacgtgttg aaaatcctgc tgcttctgga tgcggcgcaa
     4621 aaagaaggca aagccttgcc tgttcaggag ttcagacggc atatcaatat gggctacgac
     4681 gagttgggcg agcttttgga aaagctggcg cggtacggct atatctattc cggcagacag
     4741 ggttgggtgt tgaaaacggg ggcggattcg attgagttga acgaactctt caagctcttc
     4801 gtttaccgtc cgttgcctgt ggaaagggat catgtgaacc aagctgtcga tgcagtaatg
     4861 atgccgtgtt tgcagacttt gaacatgacg ctggcagagt ttgacgctca ggcgaaaaaa
     4921 cagcagcaat cttgagtatt tttgaaactg tatttttatc ctaaagacat tttcctatct
     4981 gctgattcca ccgtttcctt tctgtgtgcc gccataattt ttatgataga caagccattc
     5041 aagtttgcat tgactgcttt ttcattggca atatccaaat ggctggtcgc tgcatctaaa
     5101 aataggattt tcggttcgca atattaaggc ccgcgccaat acgatgcgtt gtttttgtcc
     5161 gcctgacagt gcgctgccca tatcgccgat caaggtttca tagcccatag gcatggcgga
     5221 gatttcttcg tgaatcatag caaggcaggc gcaatgttcg atttttcctc tatccggttc
     5281 cgtatcgaaa aaacaagggg ctgtactaga ttagccctaa attccacacc aatcccgcag
     5341 gattttaagc tgttgagacg gtgtgccgaa gttaaatcga aattcgcatt ctttcaagaa
     5401 cagcgggaaa gatttacgat cgattccgtt gtattttcgc aagacgcgtt tagtctagag
     5461 tctatatatt acatttattt ttagggtctg ctagccaatt tcttgttccc ttcattattt
     5521 tatcttctga aagaaaatta tttttttcca tgctattaat attaatgata tgatttttat
     5581 ttaaaataat ttttccatat aaaatttccg gtttgtaata gcaagagtct gaagcaaatc
     5641 cttgcccgtc aatataagaa aaataaatgt tatcatcctc cttataatat tctaaaacca
     5701 atccggatat tattttatca aaattccctt catttccatc tttcatgact aaaatataat
     5761 tagcaggcca acctttatcg taaacatatt caaactgata gttcccgaaa ctctcgatat
     5821 ccgaactaaa aaagaagaaa agcaaattaa tagccaatac aaaaacaaat aagaacaaaa
     5881 atagcaaaat tttcaactta gttaacaata tttacctctc ctttaaattc aatcctgaaa
     5941 ggtacccctt accctgggct accaattata gtttccatat ttctaaatat tgtttttaca
     6001 ttactttttt ctccccccaa aggaatgcat tttaaaatca tgcttttcag gtgctaatcg
     6061 atacttacca ttaacatctt taatcacaga tatatttcca tgtatagccc aacgtgaaaa
     6121 atctgagtat tatatacagt tataccttac tgaaacaaag ctagctgtac atatctgtac
     6181 catattttta ctacaaacaa aaaatattta taattattaa ggataagata aaaaccccca
     6241 acgccagatt aattcttaat aatttcaaat aaaaaatatt tgagattttt tcttttccaa
     6301 ataatatatt gaaatattta aagttaaggt agcttgattt aattagaaaa tcaaaaaaaa
     6361 ccattaatta atttttcttc tttaaatatt ttatatgata ttataaaatt aaataacatt
     6421 gcgaaaacat atgaaatcat caaaatacca aatatatagt gggaatgcat tattatttag
     6481 ctccttcttt tggctctgac aaattgacag tccattgata tccaatgctt gcatttgcaa
     6541 ttgctgacgc acctgcccct gttttccctg ttagtatcaa tggttctttt cttgcaagat
     6601 gtgcacctgc acaaccacct aatactaaac caccacctat tgtaaatcct tcctgttgta
     6661 tctctaatga taacattttc ttcttgtgcc gcccttaata cagattgtgg aattggattg
     6721 acctgagcag gaacttctaa aataagtttt ccttcaagct gtcttcctct tagcagatta
     6781 ggtgtacttg gaacattgga aatgacaaag tgagtacgca aaccacctga aggcgatgtg
     6841 tttgaacctg ttgaaagcgg ccaacaggct aaatgcgccc gctgccgcct aaaaggcagc
     6901 ccggatgcct gattatcggg tgtccgagga ggattaaggg ggtatttggg taaaattagg
     6961 aggtatttg
//
LOCUS       DBBZXU010000103         6652 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.103, whole genome shotgun sequence.
ACCESSION   DBBZXU010000103 DBBZXU010000000
VERSION     DBBZXU010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6652)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6652)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6652
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.103"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..410)
                     /locus_tag="ACJJDE_001760"
     CDS             complement(<1..410)
                     /locus_tag="ACJJDE_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HGG7541644.1"
                     /translation="MKTDIQTELTQALLPHEKVWANEEKTILAKNILLDLVEKTDPTI
                     IGLLLNNDELKRHFFVEVNGVLVFKLQDLRFFLDKHSVNNSYTKYANRIGLTDGNRFL
                     KDNSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRS"
     gene            579..689
                     /locus_tag="ACJJDE_001761"
                     /pseudo
     CDS             579..689
                     /locus_tag="ACJJDE_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582428.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
     gene            complement(731..1654)
                     /gene="truB"
                     /locus_tag="ACJJDE_001762"
     CDS             complement(731..1654)
                     /gene="truB"
                     /locus_tag="ACJJDE_001762"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HGG7541645.1"
                     /translation="MNTGKPQKRAVNGVLLLDKPEGLSSNTALQKARRLFHAEKAGHT
                     GVLDPLATGLLPVCFGEATKFAQYLLDADKAYTATLKLGEASSTGDAEGEIIATARAD
                     ISLAEFQTACQALTGNIRQVPPMFSALKHEGKPLYEYARKGIVIERKARDITVYAIDI
                     AEFDAPKAVIDVRCSKGTYIRTLSEDIAKHIGTFAHLTALRRTETAGFTIAQSHTLEA
                     LANLNETERDSLLLPCDVLVSHFPQTVLNDYAVHMLHCGQRPRFEEDLPSDTPVRVYT
                     ENGRFVGLAEYQKEICRLKALRLMNTAASAA"
     gene            complement(1687..2058)
                     /gene="rbfA"
                     /locus_tag="ACJJDE_001763"
     CDS             complement(1687..2058)
                     /gene="rbfA"
                     /locus_tag="ACJJDE_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HGG7541646.1"
                     /translation="MRKPQRGYARQDRVKEQIMRELAELVRTGLKDPRAGFITVNEVE
                     VTRDYSHATVFYTILNQDAREITEEVLEHARGHLRSELAKRIKLFKTPELHFKYDESL
                     ERGLNLSALIDQVAAEKPVED"
     gene            2249..3493
                     /gene="clpX"
                     /locus_tag="ACJJDE_001764"
     CDS             2249..3493
                     /gene="clpX"
                     /locus_tag="ACJJDE_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpX"
                     /protein_id="HGG7541647.1"
                     /translation="MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCIEILHED
                     GNDGTPSESAGGEPEESGKLPTPAEIVANLNDHVIGQEQAKKALAVSVYNHYKRLRHP
                     KAGANVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
                     IITKLLGKCDFDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VASVPPQGGRKHPNQEFINVDTTNILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSK
                     DENADITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDALINILTEPKNALVK
                     QYQALFGMENVELEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLKGL
                     KKVVVGKAVIEEGREPELVFES"
     gene            complement(3596..4792)
                     /locus_tag="ACJJDE_001765"
     CDS             complement(3596..4792)
                     /locus_tag="ACJJDE_001765"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HGG7541648.1"
                     /translation="MQNYLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNAL
                     GHCHPALADALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGAEANEA
                     ALKLARKYARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVP
                     FNDIAALEAAVGEQTCAVIIEPIQGESGILPATAEYLQTARRLCDRHNALLILDEVQT
                     GMGHTGRLFAYEHYGVVPDILSSAKALGCGFPIGAMLATEKIAAAFQPGTHGSTFGGN
                     PMACAVGSRAFDIINTPETLNHVREQGQKLQTALLDLCRKTGLFSQVRGMGLLLGCVL
                     DEAYRGRASEITAAALKHGVMILVAGADVLRFAPSLLLNDEDMAEGLRRLEHALTEFA
                     ATSDNP"
     gene            4913..5248
                     /locus_tag="ACJJDE_001766"
     CDS             4913..5248
                     /locus_tag="ACJJDE_001766"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541649.1"
                     /translation="MKNQKNFDKMLEARQRFDLESPQYFYLQTAFHHARQKIYNRLLL
                     LVPHRRAVLFCACLKSIPYAKQAARKWGGFFVTFTQVARFGNTRQNQENDHECNAPNR
                     RTKRNPAHL"
     gene            5196..5696
                     /locus_tag="ACJJDE_001767"
     CDS             5196..5696
                     /locus_tag="ACJJDE_001767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541650.1"
                     /translation="MNAMPQTAAQNETLHTCSIIVDDAQDFSPMLLDAGRDDTLISES
                     MIPQIRTVAALIAAERHDFSRSSPAEFTDAADFFAARILVLGVRRFHLDVSLLQILKT
                     ANSRARRFAEKHRLFFTPAQAELSLNKHKNRRLLTVETEHEVENKGNPVANSLAFVRK
                     LHTLPL"
     gene            5781..6335
                     /locus_tag="ACJJDE_001768"
     CDS             5781..6335
                     /locus_tag="ACJJDE_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541651.1"
                     /translation="MKKIIASALIATFALAACQDDTQARLEQQQKQIEALQQQLAQQA
                     DDTVYQLTPEAVKDTIPAEAQANGNNGQPVTGKDGQQYIYDQSTGSWLLQSLVGAAAG
                     AFIGNALANKFTRAGNQDSPVARRARAAYHQSARPNARTSRDLNTRSLRAKQQAAQAQ
                     RYRPTTRPPANYRRPAMRGFGRRR"
BASE COUNT         1613 a         1724 c         1748 g         1567 t
ORIGIN      
        1 ttactgcgtt taaaataaat ctcttcgcct tcttcggtgc tttgtccgcc attcaatacg
       61 caatctttaa acggaaaatc caacacaata tccgaattgt ctttcaaaaa gcggttgccg
      121 tccgtcaaac caatgcggtt ggcgtatttt gtgtaggaat tattgacgct gtgtttgtcc
      181 aagaaaaaac gtaaatcctg caatttaaac accaaaacac cattcacttc cacaaagaaa
      241 tggcgtttta actcatcatt attcaataac aaaccgataa tggtcgggtc ggttttttcc
      301 accaaatcca acagaatgtt tttggctaaa atggtttttt cttcgttcgc ccatactttt
      361 tcgtgtggta gtagggcttg ggttaattcg gtttgaatgt ctgtcttcat cgttataaat
      421 cctcatcagt cattttaatg tgccattctt gtgtaacggc aaatggtttt gcaaataaac
      481 tctaataaaa tcaattattt gctgtatttg ctgtttccgg ggcgttcgca aagttgcgat
      541 aagcggggcg ggtgtccgag tgtgtcgtga ttttgcggaa atatagtgga ttaaatttaa
      601 atcaggacaa ggcgacgaag ccgcagacag tacaaatagt acggcaaggc gaggcaacgc
      661 tgtactggtt taaatttaat ccactatatc aacacattat tcaaacacag cctgtatttt
      721 taaccgccgt tcaggcggcg gatgccgccg tgttcatcag gcgcaaggct ttcagacggc
      781 atatttcttt ttgatattcc gccagaccga caaagcggcc gttttccgtg taaacgcgta
      841 ccggcgtgtc ggaaggcagg tcttcttcga aacgcggacg ttgtccgcag tggagcatat
      901 ggacggcata atcgtttaaa acggtttggg gaaagtgtga aaccaatacg tcgcagggta
      961 gcagcaagct gtcgcgttct gtttcgttca aatttgccaa ggcctcaagc gtgtggcttt
     1021 gggcgatggt aaagccggcg gtttcagtgc ggcgcagggc ggtcaggtgg gcgaacgtgc
     1081 cgatgtgttt ggcgatgtct tcgctgaggg tgcggatgta ggtgcctttg ctgcaacgta
     1141 cgtcgatgac ggctttgggc gcgtcaaatt cggcaatatc gatggcgtaa acggtaatgt
     1201 cgcgcgcttt gcgttcgatg acgatgcctt tgcgggcgta ttcgtacagc ggtttgcctt
     1261 cgtgcttgag cgcggaaaac attggcggca cttggcggat gttgcctgtc agtgcttggc
     1321 aggccgtctg aaattcggct aaggaaatat cggcgcgggc ggtggcaatg atttcgcctt
     1381 cggcatcacc cgtgctgctg gcttcgccga gtttcagcgt ggcggtgtag gctttgtcgg
     1441 catccagcag gtattgggcg aacttggtcg cttcaccgaa gcagacgggc aaaagtccgg
     1501 ttgccaaagg gtcgagcacg ccggtatgtc cggctttttc ggcatgaaac aaacgccgcg
     1561 ctttttgcag cgcggtgttg ctggaaaggc cttcgggttt gtccaagagc aaaacaccgt
     1621 tgacggcacg tttttggggt ttgcctgtat tcatggttcg atgttcggac ggcatgggca
     1681 tatccgtcag tcttcaaccg gtttttccgc cgccacttga tcgataaggg cggacaggtt
     1741 caaaccgcgt tccaaagatt cgtcgtattt gaaatgcagt tcgggcgttt tgaacagctt
     1801 gatgcgtttg gccaattcgc tgcggaggtg tccgcgcgcg tgttccagca cttcttccgt
     1861 aatttcgcgc gcgtcttggt ttaaaatggt gtagaacacg gtggcgtggc tgtaatcgcg
     1921 ggtaacttcg acttcgttga cggtaatgaa gccggcgcgc gggtctttca gtccggtacg
     1981 gacgagttcg gcaagctcgc gcataatttg ttctttgaca cggtcttggc gggcgtagcc
     2041 gcgttggggt tttctcatga atatcctcag atttcagatt tggtttcaga cggcattttt
     2101 gccgccgggg cggttgcgaa agggcgtatt atagcctaat cggcgggatt ttaaggtaat
     2161 acattgataa gaacggatat agttattata cttggcaacc cgaacggcac gtgccgtttt
     2221 ctgtaacgca tacattgtaa agaaagccat gtccaacgaa aaccgtactt gttccttttg
     2281 cggaaaatcc aaatcacacg tcaaacattt aattgagggc gaaaacgcct ttatctgtga
     2341 cgaatgcgtc tcaaactgta ttgaaatatt gcatgaagac ggaaatgacg gcacgccttc
     2401 ggaaagtgcc ggaggggagc cggaagaatc cggcaagctg cccacgcccg ccgaaatcgt
     2461 cgccaacctc aacgaccacg ttatcggtca ggaacaagcc aagaaagcct tggcggtgtc
     2521 ggtgtacaac cattacaaac gcctgcgcca tcctaaagca ggagctaatg tcgaattgtc
     2581 gaaatccaac atcctgctta tcggcccgac cggatcgggt aaaaccctgc tggcgcaatc
     2641 tttggcgcgc aaactggatg tgccgttcgt gatggcggat gccacaactt tgactgaagc
     2701 aggttatgtc ggcgaagacg tcgagcaaat cattaccaag cttttgggca aatgtgattt
     2761 cgatgtcgaa aaagcccagc gcggcattgt ctatatcgac gaaatcgata aaatttcacg
     2821 caaaagcgac aacccgtcga ttacccgcga cgtatccggc gaaggtgtgc aacaagcctt
     2881 gttgaaactg attgaaggta cagtggccag cgttccgccc caaggcggcc gcaagcatcc
     2941 gaatcaggaa tttatcaacg tcgataccac caacatcctg tttatctgcg gcggcgcgtt
     3001 tgcaggcttg gaaaaagtca tccgccagcg tactgaaaaa ggcggtatcg gtttcggtgc
     3061 gtccgttcac agcaaggacg aaaatgccga cattaccaag ctgttcggca tcgtcgaacc
     3121 ggaagacttg attaaattcg gtctgattcc agaattaatc ggacgtttgc ctgtgattgc
     3181 aactttagaa gaattggacg aagacgcgct gattaatatt ttgaccgagc cgaaaaatgc
     3241 tttggtcaag cagtatcagg cgttgttcgg tatggaaaat gtcgaactgg agtttgaaga
     3301 aggcgcattg cgttccatcg cgcgtcaggc aatggaacgc aaaaccggcg cgcgcggcct
     3361 gaggtccatc gtcgaacgct gcctgctcga tacgatgtac cgcctgcctg atttgaaagg
     3421 cttgaaaaaa gtggtggtcg gtaaggcagt catcgaagag ggcagggaac cggaattggt
     3481 gttcgagtcc tgatggcaaa caaaaccgct tcggaacgtt gaaccacgtt tctgaagcgg
     3541 ttttttgttt ctgatgccgt ctgaagcctt cccgccttca gacggcattt gagttttacg
     3601 gattgtctga tgtcgcggca aattccgtca gcgcgtgttc caaacgtcgc aaaccttccg
     3661 ccatatcctc atcgttcaac agtagcgaag gcgcgaaacg caatacgtcc gcacccgcaa
     3721 ccaaaatcat cacgccgtgt ttcaaggcgg cggcggtgat ttcggatgcg cgtccgcgat
     3781 aggcttcgtc caacacgcag ccgagtagca gccccatccc gcgaacttgt gagaacaagc
     3841 ccgttttcct gcacaaatcc agcaatgccg tctgaagttt ctgcccctgt tcacggacat
     3901 ggtttaaagt ttcgggcgta ttgatgatgt cgaatgcgcg gctgccgacc gcacacgcca
     3961 tcgggttgcc gccgaaagtc gagccgtgcg tgcccggttg gaaggcggcg gcaatctttt
     4021 ctgtcgccag catcgcgccg atcggaaagc cgcagcccaa ggcttttgcc gaactcaaaa
     4081 tatcgggaac aacgccgtaa tgttcatagg caaacagcct gcccgtatgc cccatcccgg
     4141 tttgaacttc gtccaaaatc aacaacgcat tgtgccggtc gcacagacgg cgcgcggttt
     4201 gcaaatattc cgcagtggcg ggcaggatgc cgctttcgcc ctgtatcggc tcgatgatga
     4261 ccgcgcaggt ctgttcgccg acggcagctt ccagcgcggc aatatcgttg aacggaacgt
     4321 gcgtaatgcc ttgcggcagc ggtgcataat ccttgctgta tttcggctga ccgccgacgg
     4381 acacggtaaa cagcgtgcgt ccgtggaaac tgttgataca ggcgacgatt tcgctttttc
     4441 ctccgccgaa acggtcgcgc gcatatttcc ttgccagctt caacgccgcc tcattcgctt
     4501 ccgcgcccga gttgcagaaa aaaaccttgt cggcaaaact gtttgcaacc aatttttgcg
     4561 ccaattcctg cgccggacgc gtcgtataga tattggaaat gtgccacagc ttgtgcatct
     4621 gcgcgtttaa agcatcggca agggcagggt ggcagtgtcc cagcgcattg acggcgatac
     4681 cgcctgaaaa atcaatatat tcacgccctt ccgtatccca aacgcggctg cctgaagcgc
     4741 gttcgggaat catcggggca aaggcgaaat tgggggtcag atagttttgc ataattgctc
     4801 ctgattgcgg ttttgctcgg gattatgcac cgtttttcaa agcagataaa gggaaattgc
     4861 cgacaatatc gggcagcggt aaaaataaac cgaaatattt tcaatcggat agatgaaaaa
     4921 tcaaaaaaat ttcgataaaa tgcttgaggc gcggcagcgt tttgatttag aatctcccca
     4981 atatttttat cttcagacgg catttcatca tgcaaggcaa aaaatttaca accgcttatt
     5041 gctattggta ccacacagac gtgcggtact tttttgcgct tgcttgaaat ccatcccata
     5101 cgcaaaacag gccgctcgaa aatggggcgg cttttttgtt accttcacac aggtcgcccg
     5161 attcggcaac acacgacaga atcaggaaaa tgaccatgaa tgcaatgccc caaaccgccg
     5221 cacaaaacga aaccctgcac acttgtagca ttattgtcga tgatgcgcag gatttttccc
     5281 ccatgcttct cgatgcaggg cgggacgaca cacttatcag cgaatcgatg attccgcaaa
     5341 tccgcaccgt tgccgccctg atagccgccg aacggcacga cttcagccgc agcagccccg
     5401 ccgagtttac cgatgccgcc gatttttttg ccgcacggat tctcgtattg ggcgtgcgac
     5461 gcttccatct ggacgtatcg ctgcttcaga ttttgaaaac cgccaacagc cgcgcccgcc
     5521 gctttgccga aaaacaccgc ctgtttttca cacccgcaca agccgaattg agcctgaaca
     5581 aacacaaaaa ccgccgcctg ctgaccgtag aaaccgaaca cgaagtcgaa aacaaaggca
     5641 acccagtcgc caacagcctc gcatttgtcc gcaaactgca caccctgccc ctgtaaacat
     5701 cacgatttgt cggcagaatg cttgccaaaa ttcccgacgg cgatacaata aaaccgattt
     5761 tccacccaaa caggacacac atgaaaaaaa tcatcgcctc cgcgcttatc gcaacattcg
     5821 cactcgccgc ctgccaagac gacacgcagg cacggctcga acagcagcag aaacagattg
     5881 aagccctgca acagcagctc gcacagcagg cagacgatac ggtttaccaa ctgactcccg
     5941 aagcagtcaa agacaccatt cctgccgaag cacaggcaaa cggcaacaac gggcaacccg
     6001 ttaccggtaa agacgggcag cagtatattt acgaccaatc gacaggaagc tggctgctgc
     6061 aaagcctggt cggcgcggcg gcaggcgcgt ttatcggcaa cgcgctggca aacaaattca
     6121 cacgggcagg caaccaagac agtcccgtcg cccggcgcgc gcgtgcagcc taccatcagt
     6181 ccgcacgccc caatgcgcgc accagcaggg atttgaacac gcgcagcctc cgcgcaaaac
     6241 aacaggcggc gcaggcgcag cgttaccgcc cgacaacgcg cccgcccgcc aattaccgcc
     6301 gaccggctat gcgcggtttc ggcaggaggc ggtaaacccg gcgcgccaat gccgtctgaa
     6361 gggctttcag acggcatttt gtttccaaga gtttgatgtc gggatggcaa ttctgattta
     6421 cgtgcgttgg cagggcggca ttgtcatgcc gccgttgggt tttcagacgg catcatatcg
     6481 aaccgtcagg tcgtggggtg agcattcttg cccaccgttg taagggcggg attttttggt
     6541 gaacaggaat gcccaccctg catctgaaac ccttctgcgt cattcccacg caggaaggaa
     6601 tttagatatt tgaatttaca gaaattttca atcgttgcca aagcggaaaa gg
//
LOCUS       DBBZXU010000104         6598 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.104, whole genome shotgun sequence.
ACCESSION   DBBZXU010000104 DBBZXU010000000
VERSION     DBBZXU010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6598
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.104"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(101..2077)
                     /locus_tag="ACJJDE_001769"
     CDS             complement(101..2077)
                     /locus_tag="ACJJDE_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HGG7541652.1"
                     /translation="MNEFSLAPIVVVLLVSVITVILCRKFNIPSMLGYLLVGFLAGPG
                     MLSLIPKSHATDYLGEIGIVFLMFSIGLEFSLPKLRAMRRLVFGLGGLQVGVTMLSVM
                     GILMLTGVPFNWAFAVSGALAMSSTAIVSRILSEKTELGQPHGQMAMGVLLMQDIAVV
                     PLMILIPALAGGGDGNIWAALGLAFAKMLLTLGLLFFVGSKIMSRWFRMVAKRKSSEL
                     FMINVLLVTLGVAYLTELEGLSMALGAFVAGMLLSETEYRFQVEDDIRPFRDILLGFF
                     FITVGMKLDIQALIGGWRQVLMLLAMLLVLKALVVFAIAFKMKHSVGDSLKTALYLAQ
                     GGEFGFVMLAIAGQLDMVSPEWEQAATAAVLLSMIIAPFLLGGSDALVGRLVKSSWDM
                     KSLDLHSMLVETMSKSDHVLIVGFGRGGQTVGRVLAQEDIPYFALDLDIARVQVARSA
                     GEPVSFGDAKRREVLEAAGLGRAKMVVLTLNNMHETQHVLDNVLSMYPNMPVYVRATN
                     DDYVKTFTDIGAEEAVSDTKETGLVLAGYAMLGNGASYRHVYQTMANIRHSRYAALEG
                     LFVGSDDEAGFGENGETVRHAFPLAAEAYAVGKTVGTLPMAAYGIKLLFVRRRTGRIE
                     NPDASFTLEGGDVLVVAGKKEEIISFENWSLQGI"
     gene            2226..3065
                     /locus_tag="ACJJDE_001770"
     CDS             2226..3065
                     /locus_tag="ACJJDE_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RnfABCDGE type electron transport complex
                     subunit B"
                     /protein_id="HGG7541653.1"
                     /translation="MTATAAAIDRLLPQTQCRECGYDGCLPYAQAVATGEAYNLCAPG
                     GEAVIRDISALLGKPLVAPAKTQAKALARIDETACIGCTACIRACPADAIMGAGKLMH
                     TVIADECTGCGLCVAPCPVDCIHMQPVADTVLPRARRFSLSADSRFAAAEHARARYLK
                     RNERKQREADERKAMLAEREAAVRNARPQTPDTPKKPAFNPADLIAKAMAKAQTQQDR
                     LAAADNRKDYQAKQIAEARERAELRRAQRDMKYGSDSEKAAALEYLKQYKAKQEAAQN
                     TAS"
     gene            3266..4297
                     /gene="gap"
                     /locus_tag="ACJJDE_001771"
     CDS             3266..4297
                     /gene="gap"
                     /locus_tag="ACJJDE_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HGG7541654.1"
                     /translation="MGIKVAINGYGRIGRQVLRAIYDYQIQDQLQIVAVNASGSLETN
                     AHLTKFDTVHGRFEADVSHDGGNLIVNGDKIPFFSTRNPAELPWKELGVDLVMECTGA
                     FTSKEKAKVHLESGAKKVLISAPGGDDVDATVVYGVNDSILTADMTVVSNASCTTNCL
                     SPVAKVLSESVGIVKGAMTTIHALTNDQTVTDVRHKDLRRARSGVENMIPTKTGAAKA
                     VGLVLPELKDKLDGLAIRVPTVNVSLVDLNFQAARDTTIEEINALMKAASEAGALKGV
                     LGYNTLPLVSMDFNHTTEASHFDATLTKVVDGNMIKVFAWYDNEWGFSCQMLNTARRM
                     FGLEVRPLK"
     gene            complement(4551..5276)
                     /gene="aat"
                     /locus_tag="ACJJDE_001772"
     CDS             complement(4551..5276)
                     /gene="aat"
                     /locus_tag="ACJJDE_001772"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HGG7541655.1"
                     /translation="MRIPLLAPDNYAFPDPAYALARCDGLVGVSRDLDAGRLLEAYRN
                     GVFPWFLRDGWFFWYAVGPRAVIVPERLHVPRSLEKTLRNCSYRVTVNGCFAEVVAHC
                     AAAVRPNQDGTWIAPEFQTAYLKLHEMGYAHSFECHYPDENGKTRLAGGFYGVQIGRV
                     FYGESMFALQPDASKIAFACAVPFLASLGVELIDCQQDTGHMRRFGSELLPFADFAER
                     LRMLNAVPLKEEIGRREVACKGL"
     gene            complement(5346..5780)
                     /gene="fur"
                     /locus_tag="ACJJDE_001773"
     CDS             complement(5346..5780)
                     /gene="fur"
                     /locus_tag="ACJJDE_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HGG7541656.1"
                     /translation="MEKFSNIAQLKDSGLKVTGPRLKILDLFETHAEEHLSAEDVYRI
                     LLEEGVEIGVATIYRVLTQFEQAGILQRHHFETGKAVYELDKGDHHDHIVCVKCGEVT
                     EFHNPEIEALQDKIAEENGYRIVDHALYMYGVCSDCQAKGKR"
     gene            6007..6384
                     /locus_tag="ACJJDE_001774"
     CDS             6007..6384
                     /locus_tag="ACJJDE_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HGG7541657.1"
                     /translation="MNKTLILVLSALFSLTACSVERVSLFPSYKLKIIQGNELEPRAV
                     AALRPGMTKDQVLLLLGSPMLRDAFHTDRWDYTFNTSRNGIIKERSNLTVYFENGVLV
                     RTEGDVLQNAAEALKDRQNTDKP"
     gene            6394..>6598
                     /locus_tag="ACJJDE_001775"
     CDS             6394..>6598
                     /locus_tag="ACJJDE_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HGG7541658.1"
                     /translation="MTPLKIAIAGVNGRMGRVLVEAVNNHPDTVLSGALEHSGSEALG
                     LDAGYAVGLKTGIAISDDVDAVLA"
BASE COUNT         1683 a         2186 c         1487 g         1242 t
ORIGIN      
        1 gcagacgctc taccaactga gctaatcacc catgaatttt gcgaaagcgt tattaaacca
       61 aataaccgga aatggcgcaa gccttatttc ggcatttcat ttatattccc tgcaaactcc
      121 agttttcaaa agagataatt tcttcttttt tgcctgcgac caccaacacg tcaccgcctt
      181 ccaatgtaaa cgaggcatcc gggttttcaa tccggcctgt gcggcggcgg acgaacaaga
      241 gtttgatgcc gtaagccgcc atcggaagcg tgccgactgt tttgccgacg gcgtatgctt
      301 ctgcagccaa aggaaaggcg tggcggacgg tttcgccatt ttcgccgaat cctgcctcat
      361 catcactacc gacaaacaaa ccctccaacg cggcataacg gctgtggcgg atatttgcca
      421 tcgtctgata gacgtgccgg tacgacgcgc cgttgcctaa catcgcatag cctgccagca
      481 cgagtccggt ttctttggtg tccgacacgg cttcttccgc acctatatcg gtaaacgttt
      541 tcacataatc gtcgttggtg gcgcgcacat atacgggcat attgggatac atggacagca
      601 cattgtctaa aacgtgttgc gtttcgtgca tattgttgag cgtcagcacc accattttcg
      661 cccgccccaa accggcggct tccaatactt ccctgcgttt cgcatcgccg aacgacaccg
      721 gttcgcccgc acttctggca acctgcaccc gcgcaatgtc caagtcgagc gcgaaatacg
      781 gaatatcctc ttgggcaagg acgcgtccga ccgtctgccc gcccctgccg aagccgacaa
      841 tcagcacatg gtcggacttg ctcatggttt ctaccagcat actgtgcaga tcgagcgact
      901 tcatgtccca gcttgacttg accaaacgcc cgaccagcgc atcgctgccg cccaagagga
      961 agggcgcgat aatcatcgac agcagcaccg ccgccgtcgc cgcctgttcc cattctggcg
     1021 aaaccatatc aagctgcccg gcaatggcca gcatcacgaa gccgaactcg ccgccttgtg
     1081 cgagatacaa agccgttttg aggctgtcgc cgaccgaatg tttcattttg aaggcaatgg
     1141 caaacacaac cagtgccttc aacaccagca gcattgccaa cagcatcaat acctgccgcc
     1201 agccgccgat caatgcctga atgtccagct tcatgccgac cgtgataaag aaaaagccga
     1261 gcaaaatatc gcggaacggg cggatgtcgt cttcgacttg gaaacggtat tccgtttccg
     1321 aaagcagcat ccccgccaca aacgcgccca acgccataga caaaccttcc agctcagtca
     1381 gataagccac acccaaggtt accagcagca cattgatcat aaagagttcg gacgatttgc
     1441 gttttgccac catcctgaac catcgcgaca taattttgct gccgacgaaa aacagcagcc
     1501 ccagcgtcag cagcattttt gcaaacgcca aacccaaggc cgcccaaata tttccgtccc
     1561 ctccgcccgc cagcgcggga atcagaatca tcagcggcac gacggcgatg tcctgcatca
     1621 gcagcacgcc catcgccatc tgaccgtgcg gctgccccaa ttccgtcttt tccgacaaaa
     1681 tccggctcac aatcgccgtg gacgacatcg ccaacgcgcc cgacacggca aacgcccaat
     1741 tgaacggcac gcccgtcagc atcagtatgc ccattaccga cagcatcgta acgccgacct
     1801 gcaaaccgcc cagcccgaat accagccgcc tcatcgccct caacttgggc agcgagaact
     1861 ccaaaccaat gctgaacatc aggaacacaa tcccgatttc acccaaataa tccgtcgcat
     1921 ggcttttcgg aatcaggctg agcataccgg gccccgccaa aaagcccacc agcaggtagc
     1981 ccagcatgga gggaatgttg aacttgcggc acaggatcac cgtaatgacc gacaccagca
     2041 aaacaaccac aataggggca agcgaaaatt cgttcataga ccgtccgaac aggaaaatac
     2101 agaaaaatgc cgtctgaaac ggcatacgcc gccgtattat aacaaaacac cgcgcaccat
     2161 ccgaaacggg cgcggcatac aattctgcta aaatacgccc tttcgatttt gagccgcaca
     2221 ccgacatgac cgccacagcc gccgccatag accgcctgct tccccaaacc caatgccgcg
     2281 aatgcggcta cgacggctgc ctgccctacg cacaggcagt cgcaacaggc gaagcgtaca
     2341 acctctgcgc cccgggcgga gaagccgtca ttcgggacat ttccgccctg ctcggcaaac
     2401 cccttgtcgc acctgccaaa acccaagcca aagcactcgc ccggatagac gaaaccgcct
     2461 gtatcggctg caccgcctgc atccgcgcct gccctgccga tgccattatg ggtgcgggca
     2521 aacttatgca caccgtcatc gccgacgaat gcaccggctg cggactctgc gtcgccccct
     2581 gccccgtcga ctgcatccat atgcagcccg ttgccgacac cgtcctgccc cgcgcgcgcc
     2641 gcttcagcct gtccgccgac agccgttttg ccgccgccga acacgcgcgt gcgcgctacc
     2701 tcaaacgcaa cgaacgcaaa cagcgcgaag ccgacgaacg caaggccatg cttgccgaac
     2761 gcgaagccgc cgtccgcaac gcgcgtccgc aaacacccga cacaccgaaa aaaccggcgt
     2821 ttaaccctgc cgacctcatc gccaaagcca tggcaaaagc gcaaacccaa caagaccgcc
     2881 tcgccgccgc cgacaaccgc aaagactatc aggcgaaaca gatagccgaa gcccgcgaac
     2941 gcgccgagtt gcgccgcgcc caacgcgata tgaaatacgg cagcgacagc gaaaaagccg
     3001 ccgccctcga atatctcaaa caatacaaag ccaaacagga agccgcacag aataccgcct
     3061 cctgaccctt ccctgatatg ccgtctgaaa accgtttcag acggcatttt atcaagctct
     3121 ccgtccgccg cacccgtgcc gtccgcatct taccgcccac ccttccggcc gcgccgtttt
     3181 caataaaata ttaattacac gccactacaa atttgctata atccgccccg aaaatctacc
     3241 caacccctca acaaaggaac aaaccatggg catcaaagtc gccatcaacg gctacggacg
     3301 catcggccgc caggttttgc gcgccatcta cgattatcag attcaagacc aactccaaat
     3361 cgtcgccgtc aacgccagcg gcagccttga aaccaacgcc cacctcacca aattcgacac
     3421 cgtgcacgga cgctttgaag ccgacgtatc ccacgacggc ggcaacctca tcgtcaacgg
     3481 cgacaaaatc cccttcttct cgacccgcaa ccctgccgaa ctgccgtgga aagaactcgg
     3541 tgtcgatttg gtcatggaat gcaccggcgc gttcaccagc aaagaaaaag ccaaagttca
     3601 tctggaaagc ggcgcgaaaa aagtcctcat ttccgcaccg ggcggcgacg atgtcgatgc
     3661 aaccgtcgtg tacggcgtga acgacagcat cctgaccgcc gacatgaccg tcgtttccaa
     3721 cgcttcctgc accaccaact gcctctcgcc ggttgccaaa gtgttgagcg aaagcgtcgg
     3781 catcgtcaaa ggcgcgatga ccaccatcca cgcgctgacc aacgaccaaa ccgttaccga
     3841 cgtgcgccac aaagacctgc gccgcgcccg cagcggcgtg gaaaacatga ttccgaccaa
     3901 aactggcgcg gcaaaagccg tcggactggt actgcccgaa ttgaaagaca aactcgacgg
     3961 gcttgccatc cgcgtgccga ccgtcaacgt atcattggta gatttgaact tccaagccgc
     4021 gcgcgacacg acaatcgaag aaatcaacgc actgatgaaa gccgcctcgg aagcaggcgc
     4081 gctcaaaggc gttttaggct acaacaccct gcccttggtt tccatggact tcaaccacac
     4141 caccgaagcc agccacttcg acgcaacact gaccaaagtc gttgacggca acatgattaa
     4201 agtcttcgca tggtatgaca acgaatgggg cttcagctgc caaatgctga acaccgcacg
     4261 ccgtatgttc ggacttgaag tgcgcccgct caaataagca ataaaccgtc aaacaaaatg
     4321 ccgtctgaaa cccgatgttt tcaagttcca gacggcattt ttcatttttc accgtgattt
     4381 tacccggctg tcgtcatttc taattttata gtggattaac aaaaaccagt acggcgttgc
     4441 ctcgccttgc cgtactattt gtactgtctg cggcttcgtc gccttgtcct gatttttgtt
     4501 aatccactat aatccaccat atttgaacct gaccgaagca taagccgcca tcaaagcccc
     4561 ttgcacgcca cttcgcgccg cccgatttcc tctttcaacg gcacggcgtt caacatccgc
     4621 agacgttcgg caaaatccgc aaacggcagc agctccgaac cgaaacggcg catatgcccc
     4681 gtatcctgct ggcagtctat cagttccaca cccaaagacg cgagaaacgg cacggcgcag
     4741 gcaaacgcga ttttcgacgc atccggttgt aatgcgaaca tcgattcgcc gtaaaacacc
     4801 ctgccgatct gaacgccgta aaacccgccc gccaacctcg ttttaccgtt ttcatcggga
     4861 taatggcact caaacgaatg cgcgtatccc atttcgtgca gcttcaaata tgccgtctga
     4921 aactcgggcg caatccaagt tccgtcctga ttcgggcgca ccgctgccgc acaatgcgcg
     4981 accacttccg caaaacagcc gttgaccgta acccgatagc tgcagttgcg tagcgttttc
     5041 tccagcgagc gcggaacgtg cagacgttcg ggaacaatca ccgcacgcgg cccgaccgca
     5101 taccaaaaaa accaaccgtc tcgcaaaaac caaggaaaca cgccgttccg atacgcctcg
     5161 agcagccgcc ccgcgtccaa atccctgctc acgccgacca gcccgtcgca ccgtgccaaa
     5221 gcataggcag gatcgggaaa ggcataattg tcaggggcaa gcagcggaat acgcatggca
     5281 gttctccaaa aacacagacg gcatccaaaa tcatgaatgc cgtctgaaca acaaaccgtc
     5341 cggatttaac gtttgccctt ggcctgacag tcgctgcaca cgccgtacat ataaagcgcg
     5401 tgatcgacga tgcggtagcc gttttcctcg gcgattttgt cttgcagggc ttcgatttcg
     5461 ggattgtgga attccgttac ctcgccgcac ttcacacaga cgatatggtc gtggtggtcg
     5521 cccttgtcca actcataaac cgccttgccc gtttcaaaat ggtggcgttg caaaatgccc
     5581 gcctgctcaa attgcgtcag cacgcgataa atcgtcgcca caccgatttc cacaccctct
     5641 tccaacaaaa tacggtacac atcctcggca ctcaaatgct cttccgcatg agtctcgaac
     5701 aaatccaaaa tcttcaaacg cgggccggta actttcagtc cactgtcttt cagttgcgca
     5761 atgttgctga atttttccat aatattcaat atccctgtaa aataatagac gctataatac
     5821 gcaatttcag cctgcttgcc cactatcaca ccatagcagt ttgcaatagc aaaaccgcaa
     5881 cggcggacgg gcagtcggac acagacaggg tgaaataccg cttaagcgta tgattatcgt
     5941 tcgcttttat aaaatattca agcagtgcta cactagacat cccgatttgc acagaaaggt
     6001 tctcccgtga acaaaaccct catactcgtc ctttccgccc tgttcagcct gaccgcgtgc
     6061 agcgtcgaac gcgtttcact gttcccctcg tacaaactca aaatcataca gggcaacgaa
     6121 ctcgaacccc gcgccgttgc cgccctgcgc cccggcatga ccaaagacca agtcctgctc
     6181 ctgctcggca gccccatgct gcgcgacgca ttccataccg accgctggga ctataccttc
     6241 aacacctccc gcaacggcat catcaaagaa cgcagcaatc tgaccgtcta ttttgaaaac
     6301 ggcgtactcg tccgcaccga aggcgacgtc ctgcaaaacg ctgccgaagc cctcaaagac
     6361 cgccaaaaca cagacaaacc ataaggaaca cacatgacac cgctcaaaat cgctatcgcc
     6421 ggcgtcaacg gccgcatggg gcgcgtattg gttgaagccg tcaacaacca tcccgacacc
     6481 gtcctttccg gcgcgctcga acactcgggc tcagaagccc tcgggctgga cgcaggctac
     6541 gccgtcggac tcaaaaccgg catcgccatt tcagacgacg ttgacgccgt tctcgcac
//
LOCUS       DBBZXU010000105         6562 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.105, whole genome shotgun sequence.
ACCESSION   DBBZXU010000105 DBBZXU010000000
VERSION     DBBZXU010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6562
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.105"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..532
                     /locus_tag="ACJJDE_001776"
     CDS             <1..532
                     /locus_tag="ACJJDE_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SGNH hydrolase domain-containing protein"
                     /protein_id="HGG7541659.1"
                     /translation="YASRVFQNWAACRAVYRYAEEHLPRYSKVVLAMRWGSQMPENSR
                     SLAYDAGFFQKFDRMLHKLSSEKQAVYLMADNLASSYNVQRAYILSSRIPGYRQTLRP
                     DDESTLKANARIRELAAKYPNVYIIDAAAYIPADFQIGGLPVYSDTDHINPYGGTELA
                     KRFSEKQRFLNTRHNH"
     gene            594..1889
                     /gene="tyrS"
                     /locus_tag="ACJJDE_001777"
     CDS             594..1889
                     /gene="tyrS"
                     /locus_tag="ACJJDE_001777"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HGG7541660.1"
                     /translation="MSVIQDLQSRDLIAQTTDIEALDALLNEQKIALYCGFDPTADSL
                     HIGHLLPVLALRRFQQAGHTPIALVGGATGMIGDPSFKAAERSLNSAETVAGWVESIR
                     NQLTPFLSFEGGNAAIMANNADWFGSMNCLDFLRDIGKHFSVNAMLNKESVKQRIDRD
                     GAGISFTEFAYSLLQGYDFAELNKRHGAVLEIGGSDQWGNITAGIDLTRRLNQKQVFG
                     LTLPLVTKSDGTKFGKTEGGAVWLNAKKTSPYQFYQFWLKVADADVYKFLKYFTFLSI
                     EEIDAVEAKDKASGSKPEAQRILAEEMTRLIHGEEALAAAQRISESLFAEDQSSLTES
                     DFEQLALDGLPAFEVSDGINVVEALVKTGLASSNKEARGFVNSKAVLLNGKPAEANNP
                     NHAAERPDDACLLTDEHKRFGKYTILRRGKRNHALLVWK"
     gene            2416..3336
                     /gene="ribF"
                     /locus_tag="ACJJDE_001778"
     CDS             2416..3336
                     /gene="ribF"
                     /locus_tag="ACJJDE_001778"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003749748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HGG7541661.1"
                     /translation="MRIRLGRHNAPDFPHGAAVTIGNFDGVHLGHKHILQKLRLEADA
                     RGLPVVAVIFEPQPKEFFASRTGRVPPCRISPLRTKLELLEGTGCIDAVWVLRFDRHF
                     SEISAQGFIDRLLRQTLNTRYLLVGDDFRFGAGREGCFELLAQQPDMQTERTPSVIVE
                     DIRTSSTAVRQALSDGNLAYAKKLLGHDYVLGGRVVHGRKLGRTLNAPTANIRLPGHR
                     YALGGVFVVEADGAFGTRRGVASFGFNPTVDSGCSQKLEVHLFDFQGDLYGQRLNVRF
                     LHKLRDEEKFDGMEELKRQIAADMEAAKCW"
     gene            3478..6267
                     /gene="ileS"
                     /locus_tag="ACJJDE_001779"
     CDS             3478..6267
                     /gene="ileS"
                     /locus_tag="ACJJDE_001779"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013449470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HGG7541662.1"
                     /translation="MTDYSKTVNLLESPFPMRGNLAKREPAWLKSWYEQKRYQKLREI
                     AKGRPKFILHDGPPYANGDIHIGHAVNKILKDIIIRSKTQAGFDAPYVPGWDCHGLPI
                     EVMVEKLHGKDMPKARFRELCREYAAEQIARQKKDFIRLGVLGDWDHPYLTMDFKTEA
                     DTVRMLGEIYKSGYLYRGAKPVQFCLDCGSSLAEAEVEYKDKVSPAIDVAYPFKDTAA
                     LAAAFGLAGIEGKAFAVIWTTTPWTLPASQAVSAGADVVYQLIDTPTGKLVLAKDLAE
                     DALKRYGFSDGIAILAETTGDKLENLHMNHPFLERDIPMLNGEHVTTDAGTGLVHTAP
                     AHGLEDYAVCNKYGIELYNPVNAEGKYIGETPRVAGMRVWEANPVILQWLEETSNLLA
                     SSKIEHSYAHCWRHKTPLIYRATGQWFVGMDKAGADGKTLRDKAIKAVDDTEFFPSWG
                     RARLEAMIEGRPDWVVSRQRYWGTPMTFFVHKETGELHPNSAELLEKVALKIEEKGIE
                     AWFSLDKSELLSAEDCENYDKLSDTMDVWFDSGSTHYSVVKQREELEWPADLYLEGSD
                     QHRGWFQSSMLTGCASSMGRAPYKQLLTHGFVVDGEGKKMSKSIGNVVAPQEVYNEFG
                     ADILRLWAASTDYSGELAISKEILKRVTESYRRIRNTLSFLFANLSDFNPIEDAVQQA
                     DMVEIDRYAVVLARQLQERLAGDYYPRYAFHFAVKDIVSFCSEDLGAFYLDILKDRLY
                     TTKADSHARRSAQTALYHITRSLVLLIAPILCFTGEEAWDIIGGGEEDSVLFHTWHEF
                     PTINEKTEAELVKKWTAIREAREAVTAAIEPLRADKTVGSSLQAEAEITAPEEMAGYL
                     NALGEELRFALLVSKAEVKVGSELAVAAKASDGEKCERCWHYTRDVGAVAGYETVCKR
                     CAENVGGEGETRHYA"
BASE COUNT         1603 a         1867 c         1709 g         1383 t
ORIGIN      
        1 ctacgcgtcc cgcgtgttcc aaaactgggc cgcctgccgc gccgtttacc gctatgccga
       61 agaacacctg ccccggtatt caaaagtggt tttggcgatg cgctggggca gccagatgcc
      121 cgaaaacagc cgctcccttg cctacgatgc cggttttttc caaaaattcg accgtatgct
      181 gcacaaactc tcatccgaaa aacaagccgt ttacctgatg gcggacaacc ttgcctcgtc
      241 ttacaacgtc cagcgcgcct atatcttgtc ttcacgcata ccgggttacc gccaaaccct
      301 gcgcccggac gacgaaagca ccctgaaagc caatgcacgc atcagggaat tggcagccaa
      361 ataccccaac gtctatatta ttgatgccgc cgcctatatc cccgcagatt ttcaaatcgg
      421 cggattgccg gtttactcgg acacagacca catcaaccct tacggcggca cggaattggc
      481 aaagcgtttt tccgaaaaac aacggtttct caatacgcgc cataaccatt gattcgctta
      541 aatttgttac aatcggcggt ttgcaaaaac gctaattttt ttgaaagaga ccgatgagcg
      601 tcatccaaga cctgcaatcg cgcgacctta tcgcgcaaac gaccgacatc gaagccttag
      661 acgctttgtt gaacgaacaa aaaatcgccc tttactgcgg tttcgatccg accgccgaca
      721 gcctgcacat cggacacctg ctgcccgtat tggcattgcg ccgcttccaa caggcggggc
      781 atacgccgat tgctttggtg ggcggcgcga ccggtatgat cggcgacccc agcttcaaag
      841 ccgccgaacg cagcttgaat tccgccgaaa ctgttgccgg ctgggtggaa agtatccgca
      901 accaattaac ccctttcttg agctttgaag gcggaaatgc cgccattatg gcgaacaatg
      961 ccgactggtt cggcagcatg aactgccttg acttcctgcg cgacatcggc aagcatttct
     1021 ccgtcaacgc catgctgaac aaagaatccg tcaaacagcg cattgaccgc gacggcgcag
     1081 gcatttcctt caccgagttc gcctactccc tgctgcaagg ctacgacttc gccgagttga
     1141 acaaacgcca cggcgcggtt ttggaaatcg gcggctccga ccaatggggc aacatcaccg
     1201 ccggtatcga cctgacccgc cgcctgaatc aaaaacaagt gttcggcctg accctgcctt
     1261 tggttaccaa atcagacggc accaaattcg gcaaaaccga aggcggcgca gtatggctga
     1321 acgcgaaaaa aacctcgccc tatcagttct accaattctg gctgaaagtc gccgatgccg
     1381 atgtgtataa attcctgaaa tactttacct tcctgtccat cgaagaaatc gatgccgtcg
     1441 aagcgaaaga caaggcaagc ggcagcaagc ccgaagcgca acgcatcctc gccgaagaaa
     1501 tgacccgcct gattcacggc gaagaagccc ttgccgccgc gcagcgcatt tccgaaagcc
     1561 tgtttgccga agaccaaagc agcctgaccg aaagcgactt cgagcagctc gccctcgacg
     1621 gcctgcctgc atttgaagtt tcagacggca tcaatgtcgt cgaagccttg gtcaaaaccg
     1681 gtttggcatc ctccaataaa gaagcgcgcg gctttgtgaa cagcaaagcg gttttgctca
     1741 acggcaaacc tgccgaagcc aacaacccca accacgccgc cgaacgcccc gacgatgcct
     1801 gcctgctgac cgacgaacac aaacgtttcg gcaaatacac catccttcgg cgcggcaaac
     1861 gcaatcacgc gcttttggtt tggaaataat ccgattgccg cagaaatgcc gtcattcccg
     1921 cgcaggcggg aatccggacc tgtccgcacg gaaacttatc gggcaaaacg gtttcttaga
     1981 ttccacgttc tagattcccg cctgagcggg aatgacgagt ttcaagatta cggtgttgtc
     2041 ggaacgcaac tgaaccgtca ttcccacgaa agtgggaatc tagaatctcg gggtttgagc
     2101 aactgttttt atccgataag tttctgtgcg gacaggtccg gattcccgcc tgcgcgggaa
     2161 tgacggcgga gggttgtttg tctcggttta cctggttaaa aaagaacgat tttcactgat
     2221 gttgcatcag gtttggggcg atgtttcaac acatagcacc gcgcctgctg cgcgctttat
     2281 gcgtttggcg cgttcggctg cgggaaattt gcctactttt cccgcgtcgg gcgggcgtaa
     2341 cgggcggcac actgtctata aaccgcaata ccgtttacaa tgaccgcctg tttcaccaca
     2401 tacccgaaca taacaatgag aatcaggctg gggcggcaca acgcgcccga ctttccgcac
     2461 ggggccgccg taaccatagg caattttgac ggcgtacacc tcggacacaa acacatcctc
     2521 caaaaactcc gcctcgaagc cgatgcgcgc ggcctgcccg tcgtagccgt tatcttcgag
     2581 ccgcaaccca aagaattttt tgcaagccgc acgggtagag tgccgccgtg ccgcatcagc
     2641 cccctgcgta ccaaactgga attgctggaa gggacgggct gcatcgatgc cgtctgggtt
     2701 ttgcgtttcg accggcattt ttccgaaata tccgcgcaag ggtttatcga ccgcctgctg
     2761 cgtcaaactt taaatacgcg ctatttgctc gtcggcgacg atttccgttt cggtgcgggg
     2821 cgggaaggct gttttgaact gttggcacaa cagcccgata tgcagaccga acgcacgcct
     2881 tccgtcatcg tcgaagacat ccgcaccagc agtaccgccg tccgccaggc cctttcagac
     2941 ggcaaccttg cctatgcgaa aaaacttttg gggcacgact acgttttggg gggcagggtg
     3001 gtgcacggca gaaaactcgg acgcacctta aacgccccga ctgccaacat ccgcctgccc
     3061 ggccaccgtt atgcactcgg cggcgtgttc gtcgtcgaag cggacggcgc attcggcacg
     3121 cggcgcggcg tggcgagctt cggcttcaat cccaccgttg atagcggctg ttctcaaaag
     3181 cttgaagtcc acctgttcga ctttcaaggc gacctgtacg gacaacggct gaacgtccgc
     3241 ttcctgcaca aactgcgcga tgaggaaaag tttgacggta tggaagaact gaaaaggcag
     3301 atagcagccg atatggaagc cgcaaagtgt tggtaggcaa accttataca aaccatccga
     3361 ttgggctaca atcaaccttt taacttttca gacggcatag gggtttcccg ttgtgaaata
     3421 ctgtttgagg cgcaatgccg tctgaaaccg aaatattgta acaatagaga tcaaaaaatg
     3481 accgattaca gcaaaaccgt caacctgctc gaaagcccgt ttccgatgcg cggcaatctt
     3541 gccaagcgcg agcctgcatg gctgaaaagc tggtacgagc aaaaacgcta ccaaaaactg
     3601 cgcgaaatcg ccaaaggccg tccgaaattc atcctgcacg acggcccgcc gtatgccaac
     3661 ggcgacatcc acatcggtca cgccgtcaac aaaattctca aagacatcat tatccgcagc
     3721 aaaacccaag ccggttttga cgcgccttat gtgccgggtt gggactgtca cggcctgcct
     3781 atcgaagtga tggtggaaaa actgcacggc aaagacatgc ctaaagcccg tttccgcgaa
     3841 ttgtgccgcg aatacgccgc cgaacagatt gcccgtcaga aaaaagactt tatccgcttg
     3901 ggcgtgttgg gtgactggga ccatccttac ctgaccatgg atttcaaaac agaagccgat
     3961 accgtgcgta tgctcggcga aatctacaaa tcgggctatc tctaccgggg cgcgaaaccg
     4021 gttcaattct gcttggactg cggttcttca ttggccgaag cggaagtgga atacaaagac
     4081 aaagtatcgc ctgcgattga cgttgcctat ccgtttaaag acaccgccgc gcttgccgcc
     4141 gcattcggtt tggcaggtat cgaaggcaaa gcgtttgccg ttatttggac aaccacgcct
     4201 tggacgctgc cggcgagcca agccgtgtct gccggtgcgg acgtggtgta tcaattaatc
     4261 gatacgccta caggcaaatt ggtgctggcg aaagatttgg cggaagatgc gctcaaacgt
     4321 tacggctttt cagacggcat cgccatcctt gccgaaacca ccggcgacaa gctggaaaac
     4381 ctgcacatga accatccgtt cctcgaacgc gatattccca tgcttaacgg cgaacacgtt
     4441 accaccgatg ccggtaccgg cttggtgcat actgcgcccg cgcacggttt ggaagactac
     4501 gccgtctgca acaaatacgg catcgagctt tacaatcctg tcaacgccga aggcaaatac
     4561 atcggcgaaa cgccgcgtgt cgccggtatg cgcgtttggg aggcgaaccc cgtcatcctg
     4621 caatggttgg aagaaaccag caaccttttg gcaagcagta aaatcgaaca cagctacgcc
     4681 cactgctggc ggcacaaaac gccgctgatt taccgcgcga caggtcaatg gtttgtcggt
     4741 atggacaaag ccggtgccga cggcaaaacc ctgcgcgaca aagccatcaa ggccgtggac
     4801 gacaccgaat tcttcccgtc ttggggtcgc gcgcgtttgg aagccatgat tgaaggtcgt
     4861 cctgactggg tggtttcacg ccaacgctat tggggcacgc cgatgacttt ctttgttcac
     4921 aaagaaacgg gcgagctgca tccgaactct gccgaacttt tggaaaaagt tgccctgaaa
     4981 atcgaagaaa aaggcatcga agcgtggttc tccctcgata agagcgaact cttgagcgcg
     5041 gaagattgcg aaaattacga taaactttct gacacaatgg acgtatggtt cgattccggt
     5101 tcgacccatt attccgttgt gaaacaacgc gaagaattgg aatggccggc ggatttgtat
     5161 ctcgaaggca gcgaccagca ccgcggctgg tttcaatcgt ccatgctgac cggctgcgcc
     5221 tcatcaatgg gtcgcgcgcc gtataaacag ctgctgaccc atggtttcgt tgtcgacggc
     5281 gaaggcaaaa aaatgtcgaa atccatcggc aacgtcgttg caccgcaaga ggtttataac
     5341 gaattcggcg cagacatcct gcgcctgtgg gcggcatcta ccgattacag cggcgaattg
     5401 gcgatttcca aagaaatcct caaacgcgta accgaaagct accgccgtat ccgcaatacc
     5461 ttgagctttt tgtttgccaa cttgagcgac tttaatccga ttgaagatgc cgtgcaacag
     5521 gcggatatgg tggaaatcga ccgctacgcc gtggtattgg cacgtcagct gcaagagcgt
     5581 ctggcaggcg attactatcc gcgttatgcc ttccactttg ccgtaaaaga cattgtttct
     5641 ttctgctcgg aagacttggg tgcgttctac ctcgacatcc tgaaagaccg cctctacacc
     5701 accaaagccg acagccatgc acgccgcagc gcacaaactg ccctgtatca catcacacgc
     5761 agtttggttc tcttgattgc accgattttg tgcttcaccg gcgaagaagc gtgggacatc
     5821 atcggcggcg gcgaagaaga cagcgtcctc ttccatactt ggcacgagtt cccgaccatc
     5881 aacgaaaaaa ccgaagccga actggtgaaa aaatggacgg caatccgcga agcccgcgaa
     5941 gcggtaaccg ccgccatcga gcctttgcgc gccgacaaaa ccgtcggttc gtccttgcaa
     6001 gccgaagccg aaattaccgc gccggaagaa atggccggct atctgaatgc tttgggcgaa
     6061 gaattgcgct ttgctttgct ggtgtctaaa gcagaagtga aagtaggcag cgaacttgcc
     6121 gttgccgcta aagccagtga tggtgaaaaa tgcgaacgct gctggcacta cacccgcgat
     6181 gtgggcgcgg ttgcaggcta tgaaaccgtc tgcaaacgct gtgcagagaa tgtcggcgga
     6241 gaaggcgaaa cgcgccatta cgcctgataa agtttgagca aatgccgtct gaaaccgccg
     6301 aacagcattt cagacggcat tttttgtgcc gcgatttgtc tttataacgg cggaggggtt
     6361 tcaagattgc ggtgttgtcg gaatgcaact gaaccgtcat tcccacgaaa gtgggaatct
     6421 agaatctcga ggtttcagtc atttccgata gattcccgcc gcgtcgtggg tctggattcc
     6481 cgcctgtgtg ggaatgacgg atttcgagat tgcggtgttg ttggaacgca actgaaccgt
     6541 cattcccacg aaagtgggaa tc
//
LOCUS       DBBZXU010000106         6505 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.106, whole genome shotgun sequence.
ACCESSION   DBBZXU010000106 DBBZXU010000000
VERSION     DBBZXU010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6505)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6505)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6505
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.106"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            25..408
                     /locus_tag="ACJJDE_001780"
     CDS             25..408
                     /locus_tag="ACJJDE_001780"
                     /EC_number="2.7.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004143 - ATP-dependent diacylglycerol
                     kinase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HGG7541663.1"
                     /translation="MEPSSYAAEKKGKGGIRRVINAFGYSIDGIAAAYRYEAAFRQVL
                     WLNVLLVCAAFFWVSETAVRLPLIIASFVSVIVELFNTAVEAAVDHTSTEKHELAKRA
                     KDAGSAAQLFAMLMLAAVWLSALFG"
     gene            522..995
                     /locus_tag="ACJJDE_001781"
     CDS             522..995
                     /locus_tag="ACJJDE_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HGG7541664.1"
                     /translation="MKKLLAAVMMAGLAGAVSAAGVHVEDGWARTTVEGMKIGGAFMK
                     IHNDEAKQDFLLGGSSPVADRVEVHTHINDNGVMRMREVKGGVPLEAKSVTELKPGSY
                     HVMFMGLKKQLKEGDKIPVTLKFKNAKAQTVQLEVKTAPMPAMNHGHHHGEAHQH"
     gene            1121..2224
                     /gene="mnmA"
                     /locus_tag="ACJJDE_001782"
     CDS             1121..2224
                     /gene="mnmA"
                     /locus_tag="ACJJDE_001782"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HGG7541665.1"
                     /translation="MNTTANPSNIIVGLSGGVDSSVTAALLKQQGYQVRGVFMQNWED
                     DDNDEYCSIKQDSFDAIAVADIVGIDIDIVNFAAQYKDKVFAYFLQEYSAGRTPNPDV
                     LCNAEIKFKCFLDYAVGQGADTIATGHYARKEVRNGVHYLLKGLDRNKDQSYFLYRLK
                     PFQLERAIFPLGGLEKPEVRRLAAEFKLPTAAKKDSTGICFIGERPFREFLQKYLPTD
                     NGKMVTPEGKTVGEHVGLMFYTLGQRKGLGIGGAGEPWFVAAKDLTKNELIVVQGHDH
                     PLLYTRSLVMNDLSFTLPERPKAGRYTCKTRYRMADAPCELRYLDEETAELVFDEPQW
                     AVTPGQSAVLYEGDVCLGGGIIQSTDKPVIITR"
     gene            2295..3965
                     /locus_tag="ACJJDE_001783"
     CDS             2295..3965
                     /locus_tag="ACJJDE_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HGG7541666.1"
                     /translation="MKKIWLDSYEKGVSAEIDITQYNSVSDVFRQSVEKFADQPAFQN
                     MGKTLTYAETGKLATDFASYLQNVLKLPRGERVAIMLPNVLQYPVALFGILQAGLVAV
                     NTNPLYTPRELEHQLKDSGATAIIVLENFANTLELVLPRTQIKHVIVASVGEMFGLLK
                     GSLINFIIRKIKKMVPEYRIRETISFQTALKEGAKHVFQPVALNREDTALLQYTGGTT
                     GVAKGAVLSHGNICANMLQAKEWIKNQLREGKETVIAALPLYHIFALTVNLMIFANAG
                     SKIILITNPRDMKGFIGELKKQRVNVFIGVNTLFNAMVNRPDFAEVDFSGLRLTLGGG
                     MATQKAVAEKWKKITGTPIVEAYGLTEASPGVCCNPLNIESYSGSIGLPVSSTEVELR
                     DANGKEVPVGQPGELWVKGPQVMQGYWNRPEETAKAIDARGFLETGDIAVMDEKGWLK
                     LVDRKKDLVVVSGFNVYPNEIEEVIAHHGKVMEVACIGVPDEKTGEALKVFVVKKDPS
                     LTKEELIAFCRTELTAYKVPKNIEFRDELPKSNVGKILRRELRQSTGK"
     gene            4077..5711
                     /locus_tag="ACJJDE_001784"
     CDS             4077..5711
                     /locus_tag="ACJJDE_001784"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HGG7541667.1"
                     /translation="MTKFIFVTGGVVSSLGKGIAAASIAAILESRGLNVTMLKLDPYI
                     NVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDSTMTRRNSFSTGQVYENVIAKE
                     RRGDYLGGTVQVIPHITDEIKRRIHEGAAGYDVAIVEIGGTVGDIESLPFLEAIRQMR
                     SQLGRNNTLFAHLSYVPYIAAAGEIKTKPTQHTVKEMLSIGLQPDILICRMDRTMPAD
                     ERRKIALFCNVEERAIVGSYDVDSIYECPEMLHDQGIDNIITEQLQLNVQQADLTAWK
                     KIVHAIQNPKHTVKIAMVGKYVDLTESYKSLIEALKHAGIHTETDVQITFVDSESIEK
                     NNGDVSMLKDMDAILVPGGFGSRGVEGKIAAVRYARENNVPYLGICLGMQIALIEYAR
                     DVAGLKGANSTEFDLKCAAPVVALIDEWQTADGSVETRDESADLGGTMRLGAQEVELK
                     AGSLAAKIYGSEHIRERHRHRYEVNNNYVPTLEQAGLVIGGVSAGRERLVETIELPNH
                     PWFFACQFHPEFTSNPRKGHPLFTAFVKAALNNKKA"
     gene            5939..6244
                     /locus_tag="ACJJDE_001785"
                     /pseudo
     CDS             5939..6244
                     /locus_tag="ACJJDE_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227159.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         1702 a         1784 c         1613 g         1406 t
ORIGIN      
        1 tgagaacatt ttgaaaggat accgatggaa ccttcctcct acgcggcaga aaaaaaaggc
       61 aaaggcggca tcaggcgcgt cattaacgca ttcggctatt cgatagacgg catcgccgcc
      121 gcctaccgtt acgaagcggc attccgtcag gttttgtggc tgaacgtact gctggtgtgc
      181 gcggcatttt tttgggtttc cgaaaccgcc gtccgcctgc cgttgattat cgcgtctttt
      241 gtgtcggtca ttgtcgaact gttcaacacc gccgtcgaag ctgccgtcga tcatacttcg
      301 accgaaaaac acgagctggc caaacgcgcc aaagacgcag gttctgccgc acaattgttc
      361 gcgatgctga tgttggcggc ggtttggctg tctgccctgt tcgggtaaaa cgcttgcagc
      421 aggatttgta atcctttagg attagtatgt ggtatttatt attcacttaa tccactataa
      481 gattaagcac attccccgtc tgatattcaa ggagcagaaa gatgaaaaaa ttattggcag
      541 ccgtgatgat ggcaggtttg gcaggcgcgg tttccgcggc cggagtccac gtcgaggacg
      601 gctgggcgcg caccaccgtc gaaggtatga aaataggcgg cgcgttcatg aaaatccaca
      661 acgacgaagc caaacaagac tttttgctcg gcggaagcag ccccgttgcc gaccgcgtcg
      721 aagtgcatac ccacatcaac gacaacggcg tgatgcggat gcgcgaagtc aaaggcggcg
      781 tgcctttgga ggcgaaatcc gttaccgaac tcaagcccgg cagctatcac gtgatgttta
      841 tgggtttgaa aaaacaatta aaagagggcg acaagattcc cgttaccctg aaatttaaaa
      901 acgccaaagc gcaaaccgtc caactggaag tcaaaaccgc gccgatgccg gcaatgaacc
      961 acggtcatca ccacggcgaa gcgcatcagc actaatctgc tgaaaatatt tgaaatgccg
     1021 tctgaaaaag cccgggcttt cagacggcat ttttatgact gcctttaaaa tgtgttaaaa
     1081 tccgccttta aaaaccgccg tttccaacca tattctacgc atgaatacga cagcaaaccc
     1141 ttccaatatc atcgtcgggc tctccggcgg tgtcgattct tccgtaaccg ccgccctgct
     1201 caagcagcag ggttatcaag tgcgcggtgt gttcatgcag aactgggaag acgacgacaa
     1261 cgacgaatat tgcagcatca aacaggattc gtttgatgcc atcgccgttg ccgatattgt
     1321 cggcatcgac atcgacatcg ttaatttcgc cgcgcaatat aaagacaaag tctttgctta
     1381 ttttcttcag gaatacagtg cggggcgcac gccgaatccc gatgtgttgt gcaacgccga
     1441 aatcaaattc aaatgctttt tggattacgc cgtagggcag ggcgcggata ccatcgccac
     1501 cggacactat gcgcgcaaag aagtccgcaa cggcgtgcat tacctgctca aaggtttgga
     1561 tcgaaacaaa gaccaaagct atttcctcta ccgcctcaag cctttccaac tcgagcgcgc
     1621 gatttttccg ttgggcggtt tggaaaaacc cgaagtccgc cgccttgccg ccgagttcaa
     1681 actgccgact gccgccaaaa aagacagcac gggcatctgc ttcatcggcg aacgcccgtt
     1741 tcgcgagttt ctgcaaaaat acctgccgac cgacaacggt aaaatggtta cgcccgaagg
     1801 gaaaaccgtc ggcgaacacg tcgggctgat gttctacacg ctcggacagc gcaaaggttt
     1861 gggcattggc ggcgcgggcg aaccgtggtt tgttgcggct aaagatttga cgaaaaacga
     1921 actgattgtc gtgcaaggac acgaccatcc gctgctctat acccgcagcc ttgtgatgaa
     1981 cgatttgagt ttcacgcttc ccgaacgccc gaaggcagga cgctatacct gcaaaacgcg
     2041 ttaccgtatg gcggacgcgc cttgtgagtt gcgctatttg gatgaagaaa ccgccgagct
     2101 ggtgtttgac gaaccgcaat gggcggttac gccgggccag tctgccgtgc tgtatgaggg
     2161 cgatgtctgc ttgggcggcg gcattatcca atcaaccgac aaacccgtca tcatcacgcg
     2221 ataaaggtaa tgccgtctga aacggttttc agacggcatt gttccgctca attccacttt
     2281 aaagaccgat acctatgaaa aaaatctggt tagacagcta cgagaagggc gtcagtgccg
     2341 aaatcgacat cacgcaatac aattccgtca gcgacgtatt ccgccaaagc gtggaaaaat
     2401 ttgccgacca acctgctttt caaaacatgg gtaagacgct gacttatgcc gaaaccggca
     2461 aactggcaac agattttgct tcttatctgc aaaacgtcct taaattgcct cgaggagagc
     2521 gcgtggcaat aatgttgccc aatgtactgc aatatccggt tgcccttttc ggcattttgc
     2581 aggcaggttt ggtagcggtg aacaccaatc cgctctatac cccgcgcgag ctggagcatc
     2641 agttgaaaga cagcggcgcg accgccatca tcgttttgga aaatttcgcc aacacgctgg
     2701 agctggtgct gccgcgcacg cagatcaaac acgtcatcgt cgcctctgtc ggcgaaatgt
     2761 tcgggctgct taaaggttcg ctgatcaatt tcatcatccg gaaaatcaag aaaatggtgc
     2821 ccgaataccg tattcgggaa accatttcct ttcagacggc attgaaagaa ggggcgaagc
     2881 acgttttcca acctgtcgca ttaaaccgcg aagataccgc gctgttgcaa tacacgggcg
     2941 gcacgacagg tgttgccaaa ggggcggtgc tgagtcacgg caacatctgc gccaatatgc
     3001 ttcaggcaaa agaatggatt aaaaaccagt tgcgcgaggg caaagaaacc gttatcgccg
     3061 ccctgccgct gtatcatatt tttgccttaa ccgtgaatct gatgattttt gccaatgccg
     3121 gctcgaaaat catcctgatt accaacccgc gcgatatgaa aggctttatc ggagaactga
     3181 aaaaacagcg ggttaatgta tttatcggcg tgaacacgct gtttaacgcg atggttaacc
     3241 gtcctgattt tgccgaagtc gatttttcag gattgcggct gactttgggc ggcggtatgg
     3301 cgacccaaaa agccgttgcc gaaaaatgga aaaaaatcac cggcacgccc atcgtcgaag
     3361 cctacggtct gaccgaagcc agccccggcg tgtgctgcaa ccccttaaac atcgaatcat
     3421 acagcggcag catcggtttg cccgtctcgt ccaccgaagt cgaactgcgc gacgcaaacg
     3481 gcaaagaagt ccccgtcggg cagccgggcg aattgtgggt aaaaggccct caagtgatgc
     3541 aaggctactg gaaccgcccc gaagaaaccg ccaaagccat agacgcgcgc ggcttcttgg
     3601 aaaccggcga tattgccgtc atggacgaaa aaggctggtt gaagctggtc gatcgtaaga
     3661 aagacctcgt cgttgtttcc ggattcaatg tttatccgaa cgaaatcgag gaagtcatcg
     3721 cgcatcacgg caaagtcatg gaagtcgcct gtatcggcgt tcccgacgaa aaaaccggcg
     3781 aggcactcaa agtattcgtc gtcaaaaaag acccgtcatt gaccaaagaa gaacttatcg
     3841 ccttttgccg caccgaatta accgcatata aagtaccgaa aaatatcgaa ttccgcgacg
     3901 agttgcccaa gtccaacgtc ggcaaaatcc tgcgccgcga gttgcggcaa agtaccggga
     3961 aataaagaaa agatgccgtc tgaaaacagc cgtccaccgt tcagacggca tccgtccgtt
     4021 tgccagaacc gcgcgcttca cgttaaaatc acgcattcca acatgggtat tccatcatga
     4081 ccaaattcat tttcgtaacc ggcggcgttg tctcctcact gggtaaaggt atcgccgccg
     4141 cttctattgc cgccatcctc gaatcgcgcg gcttgaacgt taccatgctc aagctcgatc
     4201 cttatatcaa cgtcgatccc ggcacgatga gcccgtttca acacggcgaa gtgttcgtaa
     4261 ccgacgacgg cgcggaaacc gacctcgact tgggacacta cgaacgtttc atcgattcca
     4321 cgatgacccg ccgcaacagc ttcagcacgg ggcaggtgta cgaaaacgtc atcgccaaag
     4381 aacgacgggg cgactacctc ggcggtacgg ttcaagtcat cccgcacatt accgacgaaa
     4441 tcaaacgccg catccacgaa ggcgcggcag gttacgatgt ggcgattgtc gaaatcggcg
     4501 gtacagtcgg cgatatcgaa tctttgccat tcttggaagc catccgccaa atgcgcagcc
     4561 agctcggccg caacaataca ttgtttgccc acctgagcta tgttccttac atcgccgctg
     4621 caggcgaaat caaaaccaag ccgacccagc acaccgttaa agaaatgttg agcatcggtt
     4681 tgcaacccga catcctgatt tgccgtatgg acaggacaat gcctgcggac gaacgccgca
     4741 aaatcgcctt gttctgcaac gtggaagaac gcgcgattgt cggcagctac gatgtggaca
     4801 gcatctacga atgccccgaa atgctgcacg accaaggcat cgataacatc attaccgagc
     4861 agttgcagct taatgtgcag caggcggatt tgaccgcgtg gaaaaaaatc gtccacgcca
     4921 tccaaaaccc gaaacacacc gtcaaaatcg ccatggtcgg caaatacgtc gatttgaccg
     4981 agtcctacaa atcgctgatc gaagccttga aacacgcagg cattcacacc gaaaccgacg
     5041 tacaaattac ctttgttgac agcgaaagca tcgagaaaaa caacggcgac gtttctatgc
     5101 tcaaagatat ggacgccatc ctcgttcccg gcggtttcgg ttcgcgcggc gtggaaggca
     5161 aaatcgccgc tgtgcgctat gcccgcgaaa acaacgtgcc atacttgggc atctgcctcg
     5221 gtatgcagat tgcgctgatc gaatacgccc gcgacgtggc aggtttgaaa ggtgcgaatt
     5281 ccaccgagtt cgacctcaaa tgcgccgccc ccgtcgttgc cctgattgac gaatggcaaa
     5341 ctgccgacgg cagcgtcgaa acccgcgacg aatccgccga tttgggcggc accatgcgtt
     5401 tgggcgcgca agaagtcgaa ttgaaagcag gcagcctcgc cgccaaaatc tacggcagcg
     5461 aacacatccg cgaacgccac cgccaccgct acgaagtcaa caacaactac gttcctacgc
     5521 tggaacaggc aggtttggtc atcggcggcg tatccgccgg acgcgaacgc ttggtcgaaa
     5581 ccatcgaact gccgaaccat ccttggttct tcgcctgcca gttccacccc gagtttacct
     5641 ccaatccgcg caaagggcat cctttgttca ccgcgtttgt caaagctgcg ttgaacaata
     5701 aaaaagcctg ataaagcgtt acttgatgat caaaatgccg tctgaaagcc tgaatgaaga
     5761 ctttcagacg gcatttttgc aaatcgggga tcataaaagc catcaattta atttttatgg
     5821 ttttatctaa tattgaccaa ctgaatattg ttaagcgggg cgtgaaactc aagttgagac
     5881 ctttgcaaaa ttccccaaaa tcccctaaat tcccaccaag acatttagga gatttctcat
     5941 gagcaccttc tttcagcaaa ccgcacaagc catgattgcc aaacacatcg accgcttccc
     6001 gctattgaag ttggaccagg tgattgattg gcagccgatc gaacaatacc tgaaccgtca
     6061 aagaacccgt tacctcagag accaccgcgg ccgtcctgcc tacccgctgt tgtccatgtt
     6121 caaagccgtc ctgctcggac aatggcacag cctctccgtt cccgaactcg aacacagcct
     6181 catcacccgc atcgacttca acctgttttg ccgtttcgac gaactgagca tccctgatta
     6241 cagtatagtg gattaacaaa aaccagtacg gcgttgcctc gccttagctc aaagagaacg
     6301 attctctaag gtgttgaagc accaagtgaa tcggttccgt actatttgta ctgtctgcgg
     6361 cttcgtcgcc ttatcctgat ttttgttaat ccactataaa gaccgtcggg catctgcagc
     6421 cgtcattccc gcgccggcgg gaatctagac attcaatgct aaggcaattt atcgggaatg
     6481 actgaaactc aaaaaactgg attcc
//
LOCUS       DBBZXU010000107         6485 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.107, whole genome shotgun sequence.
ACCESSION   DBBZXU010000107 DBBZXU010000000
VERSION     DBBZXU010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.107"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..96)
                     /locus_tag="ACJJDE_001786"
     CDS             complement(<1..96)
                     /locus_tag="ACJJDE_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_060537127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7541668.1"
                     /translation="MRKSRLSRYKQNKLIELFVAGVTARTAAELVG"
     gene            163..465
                     /locus_tag="ACJJDE_001787"
     CDS             163..465
                     /locus_tag="ACJJDE_001787"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541669.1"
                     /translation="MKDFDEVCEKWEKSFKENGKEIEYNQKYSRIYGEVRGAGFNGDI
                     GEKLHRCAVMEWAENETVKLAQKWEQEQKKQQIQQKKETEKSPKHKASRDDWEMER"
     gene            complement(547..2634)
                     /locus_tag="ACJJDE_001788"
     CDS             complement(547..2634)
                     /locus_tag="ACJJDE_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003700725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase domain-containing ABC transporter"
                     /protein_id="HGG7541670.1"
                     /translation="MDYLSRLSFGFNKKLPVILQTEVAECGLACLTSILSYYGFHTDL
                     RTLRQKYTLSLKGANLADIMRFGNEMNLTPRALRLELDELSNLQLPCILHWNLNHFVV
                     LCSISKDSIVIMDPAVGMRKIKMDEVSQKFTGIALELFPNTHFEEKKETKKIKILSLL
                     RGISGLKRSLIQMLILAISLEVFALVSPFFMQWVIDHVIVTADKNLLLTLTLGFGLLA
                     ILQQLISLLQAWVGMHLSTTLNLQWKANIFKRLLDLPNDYFSKRHLGDVISRFGSIDH
                     IQETLTSTFFVLVLNSLMAVFTFVLMTIYSTQLSLIVLLTLVLYILIRWLAYYPLRNA
                     TEENIVHEAKQNSYFMETIRGIQSVKLFDKHYQRHGTWMSLFVNTVNTKLTTDKLSAL
                     FEFSNKLLFSMENIIIIYLGASAILDGSFTVGVLMAFLAYKGQFESRTASLVDQYIQI
                     KMLGLHAERLADITLNETETEIIKYNHIPKLDNEQLVLKVENVSFRYADNEPYLFENI
                     NLEFKDNEAVVLTGQSGRGKSTLLNILTGSLKPETGTVSINGHDIYQVSPSFIRGLSG
                     IVRQDDVLFAGSIGENISFFDESPNMELIEQCAKMAQIHDDILKMPMGYETLIGDMGN
                     ILSGGQKQRVILARALYKRPKILFLDEASSHLDVENEQKINHNLKSLGIMKIMVAHRQ
                     ETIQSADKILNLG"
     gene            complement(2637..3902)
                     /locus_tag="ACJJDE_001789"
     CDS             complement(2637..3902)
                     /locus_tag="ACJJDE_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family efflux transporter periplasmic
                     adaptor subunit"
                     /protein_id="HGG7541671.1"
                     /translation="MSHLFRKEVFVAQQNKWTGQVILTRPFSFLFLTFCAFLIALCII
                     IFLIFGSYTNKTTVEGQLLPTMGVVRVYSSDIGTITHKFVEDGNFVKAGEPLFKLSTS
                     RFGEKGNVQAKLAAEANLKKTLALQELERLKRIHQNEQKNVHNNIHRLNNQLENIKQQ
                     ITGQNRQIRLAEKTLNKNKFLASQGAVSQQDKMTAESHLLEQRSRLESLKLEQNNAIR
                     ELDEQKITLSSLPERHKTELSQLNRAITEMNQEILDFDLKSEQTIRASKSGYISTINV
                     DIGQQVEPSKLLLSIVPEQTELVANLYIPSKAVGFIKPKDKVVLRYQAYPYQKFGHAT
                     GEIISVARTALGKQELSGLGIIFTNPTLLNEPAYLVKVKLEKQTIKAYGENKPLQIGM
                     ILEADILHERKKLYEWVLDPLYSISGKIN"
     gene            complement(3946..4083)
                     /locus_tag="ACJJDE_001790"
     CDS             complement(3946..4083)
                     /locus_tag="ACJJDE_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541672.1"
                     /translation="MNTETIYATVFCILAATISGLLVKFNVIKIETSINSKFMLLGIS
                     I"
     gene            complement(5123..5359)
                     /locus_tag="ACJJDE_001791"
     CDS             complement(5123..5359)
                     /locus_tag="ACJJDE_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriocin transporter"
                     /protein_id="HGG7541673.1"
                     /translation="MKELHTSELVEVSGGKFHIFAQGGGNLGKKDMVAVGKIGASYSP
                     NNSGVEFSVSKQFGYVQGLGVQFSKPTFGISKKW"
BASE COUNT         2067 a         1141 c         1121 g         2156 t
ORIGIN      
        1 gcctactaac tctgctgctg ttcttgcagt tacacctgcg acaaatagct caatgagttt
       61 attttgttta taccggctta gacgactttt tctcataggg ataattctaa cttaatttga
      121 atttccctag ttatctagga cagcccctta aaaaatatcc ctttgaaaga ttttgatgaa
      181 gtttgtgaaa agtgggagaa atcctttaaa gaaaatggaa aagaaattga atataatcaa
      241 aaatattcaa gaatttatgg tgaagttcgt ggagctggct ttaatggcga tatcggagaa
      301 aagctacatc gttgtgccgt gatggaatgg gctgaaaatg agaccgtgaa attagcccaa
      361 aaatgggaac aagagcagaa aaaacaacaa attcaacaga aaaaggaaac tgaaaaatcg
      421 ccaaaacaca aagccagtcg tgatgattgg gaaatggaac gttaaaccgc tattttcatg
      481 tattctatta aattatttga aaaaagactt cactttttgt taaagaaaaa tgaagtcttg
      541 ttctgttcaa cctaaattca gaattttatc tgccgattga attgtttctt ggcggtgtgc
      601 aaccattatt ttcataatac caagactttt taggttatgg ttaatttttt gttcattttc
      661 tacatctaaa tggctacttg cttcgtctaa aaatagaatt ttgggtcgtt tatacaatgc
      721 acgagccaag ataactctct gcttttgtcc acctgataag atatttccca tatcgccaat
      781 caaggtctca tagcccattg gcattttaag tatatcgtca tgtatttgtg ccatttttgc
      841 acattgttca atgagctcca tatttgggct ttcatcaaaa aatgaaatat tttccccaat
      901 agaacctgca aaaaggacat catcttggcg aacaatcccg ctcaatcccc taataaagga
      961 tggagaaact tgatatatat catgcccatt aatactaact gtaccagttt caggttttag
     1021 gctacctgtt aaaatgttta acaaagtgga cttcccccga ccagattgtc ctgttaaaac
     1081 aactgcttca ttatctttaa attccaaatt aatgttttca aaaagatatg gctcattatc
     1141 agcatatctg aatgagacgt tttcaacttt aagaaccagt tgttcattat ctaatttagg
     1201 tatatgatta tacttaataa tttcagtttc tgtttcattt aaagtaatgt cagccaaacg
     1261 ttcagcatga agccctaaca ttttgatttg gatgtattgg tcaacgagag aagctgttct
     1321 gctttcaaat tgccctttat aagccaaaaa agccatcaga acaccgactg taaatgaacc
     1381 atctaaaatt gcgcttgcac caagataaat tatgataata ttttccatgc taaacaacag
     1441 tttatttgaa aattcaaata aagcagagag tttatctgtt gtcagcttgg tattgactgt
     1501 attcacaaat aggctcatcc aagtgccatg tctttgataa tgtttatcaa ataatttaac
     1561 tgattggata ccacgaatgg tttccatgaa atatgagttt tgtttggctt catgaacaat
     1621 attttcttct gttgcatttc ttaatgggta atatgcaagc caacgaatta gtatgtacaa
     1681 aacaagtgtt aaaagaacaa tcagcgataa ttgagtgctg taaattgtca ttaacacgaa
     1741 agtaaaaaca gccattaagc tatttaaaac taaaacaaaa aaagtagaag ttagtgtttc
     1801 ttggatatga tctattgaac caaatcttga aatcacatct cctaaatgtc gtttactgaa
     1861 atagtcatta ggtaagtcaa gtaacctttt aaatatattg gctttccatt gtaaattaag
     1921 agttgtagat aggtgcatac ctacccatgc ttgtaacagg ctaattaact gttgcaggat
     1981 agccagtaaa ccaaatccca aagtaagggt cagtaataaa tttttatcag cagttacaat
     2041 gacatggtct attacccatt gcataaagaa tggactaacc aatgcaaaga cttccaaaga
     2101 aatagctaat ataagcattt gaattaaaga gcgttttaag cctgaaatcc cccttaatag
     2161 agataatatt ttgattttct ttgtttcttt tttctcttca aaatgggtat tggggaataa
     2221 ttctagggca atccctgtga atttttgtga aacttcgtcc attttgattt ttcgcatacc
     2281 gacagcaggg tccataatga cgatactgtc tttggaaatg gaacaaagta caacaaaatg
     2341 gtttaagttc caatggagaa tgcagggtag ttgtaaattt gacagctcat ctaactctaa
     2401 acgcaaagct cgtggcgtta aattcatttc attgccaaat ctcatgatgt ctgcaagatt
     2461 tgcgcccttt aatgacaggg tgtatttttg gcgtaacgtt cttaaatcag tgtgaaagcc
     2521 ataataggac aagatggatg tcaggcatgc taaaccacat tcagcaactt ctgtttgcag
     2581 aatgacaggt agctttttgt taaatccaaa ggacagtctt gataaataat ccatttttaa
     2641 ttgatttttc ctgaaatgct gtaaagtggg tcaagtaccc attcgtacaa tttttttcgt
     2701 tcatggagaa tatctgcttc taaaatcatg ccaatttgaa gcggcttgtt ttctccgtat
     2761 gctttaatcg tttgtttttc caatttaact ttcacaagat aggcaggttc atttaataag
     2821 gttgggttag tgaaaatgat acctaaacct gatagctctt gtttaccgag agcagttctg
     2881 gcaactgaaa taatttctcc tgtggcatgt ccaaattttt ggtaagggta cgcttggtaa
     2941 cgtaaaacaa ctttatcttt cggtttaata aaaccaacag ctttactggg tatgtaaaga
     3001 ttggcgacca attcagtttg ttcagggaca atgcttaaca gcaatttaga cggttcaact
     3061 tgttgcccta tatcaacatt aattgttgat atataacctg atttactagc tcgtatggtt
     3121 tgttcggatt tcaaatcaaa atccaaaatt tcttggttca tttccgtaat cgcacggttg
     3181 agttggctca attcggtttt atggcgttca ggcaggctgc ttaatgtaat tttctgttca
     3241 tcaagttccc tgattgcatt attttgttca agttttaggc tctccaaacg tgagcgttgt
     3301 tccaataaat ggctttcggc ggtcatctta tcttgttggg atactgcgcc ttgactggct
     3361 aaaaacttgt tcttgttaag ggttttttcc gctaaacgaa tttgacgatt ttgccctgta
     3421 atttgctgtt taatattctc taattgattg tttaaacgat gaatgttgtt atgaacattt
     3481 ttttgctcat tttgatgaat gcgctttaaa cgttccaatt cttgtaatgc caaagttttt
     3541 ttaaggttgg cttctgctgc caatttggct tgtacgtttc ctttttcgcc aaaacgcgat
     3601 gtggaaagtt tgaacaatgg ttcgccagct ttgacaaagt taccatcttc aacaaattta
     3661 tgcgtaatcg tgccgatatc ggaagagtaa acacgaacca cccccatagt tggaagtaat
     3721 tgaccttcaa cggttgtttt attggtatag ctaccaaaaa tcaaaaagat aatgatacac
     3781 agagcaatga gaaaagcgca aaaagtcaga aataaaaaag agaatggacg ggtcaagata
     3841 acctgacctg tccacttatt ttgttgggct acaaagactt cttttcggaa taagtgggac
     3901 atttattatt atttcttaaa aaaatggata gaaaaacacc aataattaaa tacttatgcc
     3961 taataacata aatttgctat tgattgatgt ttctatttta attacattaa atttaaccaa
     4021 taatccagaa atggttgcag ctaaaatgca aaagacagtg gcgtaaatgg tttcagtatt
     4081 cataattttt ctctttcaaa attgttcaat ctaaatagaa aaaggtaact tcaatacata
     4141 ttgctgtaac tgaaattacc ttttccttaa tgatgtaatt atcttatggc ttcatcatgc
     4201 cacgaccgat attgtatccg ccagcagcag agaaaatacc agctccaatt gcgccaaccc
     4261 agcctactgg tcctgtccac ttgttccgtt gagctacaaa gacttctggt ctgaaaaatg
     4321 agtgattgtt agacatgtgt acttatttat gtttctttga ttgggataaa tttgtaaaaa
     4381 caaaaaaaag gcaagttgtt attatagaag aacttaaaat gcttaacata ctcattgagg
     4441 tttgtaccac ataatgagat acgagataat ttgttgggag taaaatcaaa aaaagattaa
     4501 atatttaaaa taatcactat attttttcat tatttgttcc tttttgtatt taagttctta
     4561 tgaaaaacta gggtattttg aatagaaaat atcaaaatac cctagtttta ttaaggaata
     4621 ttaccaccaa caagtgcttc catattgtac agcaccagtg attgcaccac caatagctcc
     4681 gaatttcgca cttggaatag caccaatacc acctgcaaat gaaccaacaa ttgccccacc
     4741 agctgctcca cctaatgcac taccaatggt attttttgag aaatcacgcc agttacaagc
     4801 agcaccagaa acttgttaaa tttcattcaa agtcaaaact tgcataatat tcacctttgt
     4861 taagtgtggt tgagaaaaaa gtaaattttc atcgttactc attatttgca atcatgcata
     4921 tactgtaacc aagcactata ttcagttgga tcatagtttt tcctactggg ttgtctgata
     4981 tgactattgg cactattggc acaattggga ttagcaactt tattgtgagt acctaatgga
     5041 ttgatatttc ctgtaaagtg gctattgcat gcgcttaatg agcatagatt tattaatgtc
     5101 agaaaggata aaacaaaaaa tcttaccatt ttttactaat accaaaagta ggtttcgaaa
     5161 actgtacacc aagaccttgt acatatccaa attgcttgct aacagaaaac tctactccac
     5221 tattgttagg ggaataggaa gcaccaattt taccaacagc aaccatatct tttttaccta
     5281 ggttgccgcc accctgtgca aagatatgga atttgccacc tgacacttca actaattcag
     5341 aggtgtgtaa ctctttcatg attttctcct gtaaagaagt atggttggaa atgtaaatca
     5401 gaattaacct ttcttaagtt taatttaata ctttttttgc aagtatttta ttttaaatta
     5461 aatcaatatt ttaaaaatat ttacttgtat actgaatatt tacttgtata ctgaaaaaga
     5521 aactcctaat ggtggagtgg ggcttttgtt taagtaagca ttgaaaaaat ttaaatttcc
     5581 cattatgatt aacttaatgc aagagctttt tcaggacgta caaaccagcg aacgggcgtt
     5641 ctgatgtggg caggttggtt gtcgctaacc aatttcagta gctcaatcgt cagattggta
     5701 tccggcccta tcaagctaag gagaggctgc ggctactaca caaagcacct gaaattattg
     5761 ggtgcttttg tctttttatg gcattgtacc aatttgtgta ccacgagggc ttgttcgacc
     5821 aaacgcggta acaactgaat acacactttc cccctcaact tctttgcgtt ctaaaacgac
     5881 tgtcccaatc cgagaataga caatcatagg acgatgattg ccccttacat cactaaattc
     5941 actaaaaatt tttgcgcctg attgaaaaat catttccaca taaaagggtt acacctgttt
     6001 catcgtggct taatccaaac cgcgttaaat ctgctttgtg ttctgccaaa atgtgaatca
     6061 caccaaagcc gtgattaacc tttttgtgtt cgccgtgttt taaaacaatt tgacctgccg
     6121 ggaagtctgc tctattgttc ggacaatagg gggaatatac caattacttt aactacatca
     6181 ttttttgaca tttttcttgc ctttcaattt aaaatccaaa atcatactgc cataatttag
     6241 caatccaaaa aaatttaggc agcagtcatg gtttcgtatt ttagaaaacg aaacttggtt
     6301 tggtgttttg aagcatttca gtacacaaac atggaatttt aaattgtctt gtgttgcctt
     6361 gatttaggat gttccagttt tttaataaat agtttggggc tgtcctagat aactaggaca
     6421 aacttgattt tactaattgt tttaaaatgg aacaagaact tttatctcac tgttgttaaa
     6481 acgtc
//
LOCUS       DBBZXU010000108         6176 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.108, whole genome shotgun sequence.
ACCESSION   DBBZXU010000108 DBBZXU010000000
VERSION     DBBZXU010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6176)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6176)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6176
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.108"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            143..1993
                     /gene="ltgA"
                     /locus_tag="ACJJDE_001792"
     CDS             143..1993
                     /gene="ltgA"
                     /locus_tag="ACJJDE_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase LtgA"
                     /protein_id="HGG7541674.1"
                     /translation="MYLPSMKHSLPLLATLVLAACSSTNTLPAGKTPADNIETADLSA
                     SVPTRPAEPEGKTLADYGGYPSALDAVKQKNDAAVAAYLENAGDSAMAENVRNEWLKS
                     LGARKQWTLFAQEYAKLEPAGRAQEVECYADSSRNDYTRAAELVKNTGKLPSGCTKLL
                     EQAAASGLLDGNDAWRRVRGLLAGRQTTDARNLAAALGSPFDGGTQGSREYALLNVIG
                     KEARKSPNAAALLSEMESGLSLEQRSFAWGVLGHYQSQNLNVPAALDYYGKVADRRQL
                     TDDQIEWYARAALRARRWDELASVISHMPEKLQKSPTWLYWLARSRAATGNTQEAEKL
                     YKQAAATGRNFYAVLAGEELGRKIDTRNNVPDADANSVLRMAEDGAIKRALVLFQNSR
                     TAGDAKMRRQAQAEWRFATRGFDEDKLLTAAQTAFDHGFYDMAVNSAERTDRKLNYTL
                     RYISPFKDTVIRHAQNVNVDPAWVYGLIRQESRFVIGAQSRVGAQGLMQVMPATAREI
                     AGKIGMDAAQLYTADGNIRMGTWYMADTKRRLQNNEVLATAGYNAGPGRARRWQADTP
                     LEGAVYAETIPFSETRDYVKKVMANAAYYASLFGAPHIPLKQRMGIVPAR"
     gene            2282..2494
                     /gene="rpsU"
                     /locus_tag="ACJJDE_001793"
     CDS             2282..2494
                     /gene="rpsU"
                     /locus_tag="ACJJDE_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011484193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HGG7541675.1"
                     /translation="MPAIRVKENEPFEVAMRRFKRAVEKTGLLTELRAREAYEKPTTE
                     RKRKKAAAVKRLQKRLRSQQLPPKMY"
     gene            2626..3072
                     /locus_tag="ACJJDE_001794"
     CDS             2626..3072
                     /locus_tag="ACJJDE_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010356294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HGG7541676.1"
                     /translation="MSLKIRLTEDMKTAMRAKDQVSLGTIRLINAAVKQFEVDERTEA
                     DDAKITAILTKMVKQRKDSAKIYTEAGRQDLADKENAEIEVLHRYLPQMLSAGEIRTA
                     VDAAVAETGAAGMADMGKVMGVLKTRLAGKADMGEVNKILKAVLTA"
     gene            complement(3150..3392)
                     /locus_tag="ACJJDE_001795"
     CDS             complement(3150..3392)
                     /locus_tag="ACJJDE_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541677.1"
                     /translation="MPSERNRVSDGILSDGAQTESVYRQNPFRCIETVLPLPIRYWDV
                     IASALECNYGAANQAIERQRQRAAAVAVHERVAKFL"
     gene            complement(3397..3789)
                     /locus_tag="ACJJDE_001796"
     CDS             complement(3397..3789)
                     /locus_tag="ACJJDE_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HGG7541678.1"
                     /translation="MPTSTKPYILRALCEWCSDNSLTPHILVWVNEHTRVPMQYVRDN
                     EIMLNIGATATQNLQIDNDWISFSARFGGQAHDIWIPVGHVLSLFARETGEGMGFELE
                     AYRPDTPPENTSAETAPRPAKKGLKLVK"
     gene            complement(3861..4466)
                     /locus_tag="ACJJDE_001797"
     CDS             complement(3861..4466)
                     /locus_tag="ACJJDE_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HGG7541679.1"
                     /translation="MMTLYSGITCPFSHRCRFVLYEKGMDFEIKDVDIYNKPEDLAVM
                     NPYNQVPVLVERDLVLHESNIINEYIDERFPHPQLMPGDPVMRGRGRLVLYRMEKELF
                     NHVQVLENPAATNKEQAKAREAIGNGLTMLAPSFSKSKYILGEDFSMIDVALAPLLWR
                     LDHYDVKLGKSAAPLLKYAERIFQREAFIEALTPAEKAMRK"
     gene            complement(4568..>6176)
                     /locus_tag="ACJJDE_001798"
     CDS             complement(4568..>6176)
                     /locus_tag="ACJJDE_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HGG7541680.1"
                     /translation="LMAFAWLWPGVFSHDLWNPAEPAVYTAVEALAGSPTPLVAHLFG
                     QTDFGIPPVYLWVAAAFKHLLSPWAADSYDAARFAGVFFAVVGLTSCGFAGFNFLGRH
                     HGRSVVLILIGCIGLIPTVHFLNPAAAAFAAAGLVLHGYSLACRRVIAASFLLGTGWT
                     LMSLAAAYPAAFALMLPLPVLMFFRPWQSRRLMLTAVASLAFALPLMTVYPLLLAKTQ
                     PALFAQWLDDHVFGTFGGVRHVQTAFSLFYYLKNLLWFALPALPLAVWTVCRTRLFST
                     DWGILGVVWMLAVLVLLAANPQRFQDNLVWLLPPLALFGAAQLDSLRRGAAAFVNWFG
                     IMAFGLFAVFLWTGFFAMNYGWPAKLAERAAYFSPYYVPDIDPIPMAVAVLFTPLWLW
                     AITRKNIRGRQAVTNWAAGVTLTWALLMTLFLPWLDAAKSHAPVVRSMEASLSPELKR
                     ELSDGIECIDIGGGDLHTRIVWTQYGTLPHRVGDVQCRYRIVRLPQNADASQGWQTVW
                     QGARPRNKDSKFALIRKIGENILKTTD"
BASE COUNT         1514 a         1767 c         1721 g         1174 t
ORIGIN      
        1 aatttaatcc actataaatt atgtcggaaa cattccaaag gcggtgcagt ttcggcatat
       61 aattcgggca aacgcctgtt cagacggcat tttgtctttt ccaaccctga ccgttcaggg
      121 ttccgattct taaggaaatc cgatgtacct accctctatg aagcattccc tgccgctgct
      181 ggcgacccta gtgcttgccg cgtgttcttc gacaaacaca ctgccagccg gcaagacccc
      241 ggcagacaat atagaaactg ccgacctttc ggcaagcgtt cccacccgcc ctgccgaacc
      301 ggaaggaaaa acgctggcag attacggcgg ctacccgtcc gcactggatg cagtgaaaca
      361 gaaaaacgat gccgccgtcg ccgcctattt ggaaaacgcc ggcgacagtg cgatggcgga
      421 aaatgtccgc aacgagtggc tgaagtcttt gggcgcacgc aaacagtgga cgctgtttgc
      481 acaggaatat gccaaactcg aaccggcagg gcgcgcccaa gaagtcgaat gctacgccga
      541 ttcgagccgc aacgactata cgcgtgccgc cgaactggtc aaaaatacgg gcaaactgcc
      601 ttcgggctgc accaaactgt tggaacaggc agccgcatcc ggcttgttgg acggcaacga
      661 cgcctggagg cgcgtgcgcg gactgctggc cggccgccaa accacagacg cacgcaacct
      721 tgccgccgca ttgggcagcc cgtttgacgg cggtacacaa ggttcgcgcg aatatgccct
      781 gttgaacgtc atcggcaaag aagcacgcaa atcgccgaat gccgccgccc tgctgtccga
      841 aatggaaagc ggtttaagcc tcgaacaacg cagtttcgcg tggggcgtat tggggcatta
      901 tcagtcgcaa aacctcaatg tgcctgccgc cttggactat tacggcaagg ttgccgaccg
      961 ccgccaactg accgacgacc aaatcgagtg gtacgcccgc gccgccttgc gcgcccgacg
     1021 ttgggacgag ctggcctccg ttatctcgca tatgcccgaa aaactgcaaa aaagcccgac
     1081 ctggctctac tggctggcac gcagccgcgc cgcaacgggc aacacgcaag aggcggaaaa
     1141 actttacaaa caggcggcag cgacgggcag gaatttttat gcggtgctgg caggggaaga
     1201 gttggggcgc aaaatcgata cgcgcaacaa tgttcccgat gccgacgcaa acagcgtcct
     1261 ccgtatggcg gaagacggcg cgattaagcg tgcgctggta ctgttccaaa acagccggac
     1321 cgccggcgat gcgaaaatgc gccgtcaggc tcaggcggaa tggcgttttg ccacacgcgg
     1381 gttcgacgaa gacaagctgc tgaccgccgc acaaaccgcg ttcgaccacg gtttttacga
     1441 tatggcggtc aacagcgcgg aacgcaccga ccgcaaactc aactacacct tgcgctatat
     1501 ttcgccgttt aaagacacgg taatccgcca cgcgcaaaat gttaatgtcg atccggcttg
     1561 ggtttacggc ctgattcgtc aggaaagccg cttcgttata ggcgcgcaat cccgcgtagg
     1621 cgcgcagggg ctgatgcagg ttatgcctgc caccgcgcgc gaaatcgccg gcaaaatcgg
     1681 tatggatgcc gcacaacttt acaccgccga cggcaatatc cgtatgggga cgtggtatat
     1741 ggcggacacc aaacgccgcc tgcaaaacaa cgaagtcctc gccaccgcag gctataacgc
     1801 cggtcccggc agggcgcgcc gatggcaggc ggacacgccc ctcgaaggcg cggtatatgc
     1861 cgaaaccatc ccgttttccg aaacgcgcga ctatgtcaaa aaagtgatgg ccaatgccgc
     1921 ctactacgcc tccctcttcg gcgcgccgca catcccgctc aaacagcgta tgggcattgt
     1981 ccccgcccgc tgacgtaccg atgccgtctg aaacccgccc ggtctttcag acggcatttt
     2041 tatcccgaac ggcattgacg gcgaaccata aatataagac aatccgaaaa ttgtttttcc
     2101 tgctttttca agcagcttga cacggcacaa gccgacccgt taggaggtga tgtttccgtc
     2161 acggcgcgta tcccgccgcc gcaaggcaca gcgatacggt aaaccttcaa caccgtctgc
     2221 cctacccttt ccaccgatat gatgggcaga tgaaacaacc gaatttatta aaggaaataa
     2281 aatgcctgca atccgcgtaa aagagaatga accatttgaa gtcgctatgc gccgtttcaa
     2341 acgcgccgta gaaaaaaccg gcctgctgac cgagctgcgc gcccgcgaag cctacgaaaa
     2401 accgactacc gaacgcaaac gcaaaaaagc ggcagccgta aaacgcctgc aaaaacgcct
     2461 gcgcagccaa caactgccgc ccaaaatgta ctaaacgttc aagtacagat tacaggtcag
     2521 ccctgtgata tgaggacaca ccgcaagacc tgctctgcgg tgtgttttgc ttttcagacg
     2581 gcatcgaaac ccgccgtttc catccgacat cccagcgagg acatcatgag cctgaaaatc
     2641 cgccttaccg aagacatgaa aaccgcgatg cgcgccaaag accaagtttc cctcggcacc
     2701 atccgcctca tcaacgccgc cgtcaaacag tttgaagtgg acgaacgcac cgaagccgac
     2761 gatgccaaaa tcaccgccat cctgaccaaa atggtcaaac agcgaaaaga cagcgcgaaa
     2821 atctacactg aagccggccg tcaggatttg gcagacaaag aaaacgccga aatcgaggta
     2881 ctgcaccgct accttcccca aatgctctcc gccggggaaa tccgtactgc ggtcgatgcc
     2941 gccgttgccg aaaccggcgc ggcaggtatg gcggatatgg gcaaagtgat gggcgtattg
     3001 aaaacccgcc tcgccggcaa agccgatatg ggcgaagtca acaaaatcct gaaagccgtg
     3061 ctgaccgcct gattgcccga atatcggaca aaatgccgtc tgaagcccgt atcgcaggtt
     3121 cagacggcat tttcatggtt tgatgatatt tataaaaatt ttgcaacacg ctcatgcaca
     3181 gcaactgccg ctgctcgttg gcgttgccgc tctatcgctt ggttagctgc accataattg
     3241 cactctaatg ctgatgcaat aacgtcccaa tatcgaatcg gcaggggcaa cacggtttcg
     3301 atacaccgaa acgggttttg ccgataaacg gattccgttt gcgccccatc ggacaaaatg
     3361 ccgtctgaaa cacgattccg ttcagacggc atagatttat ttgaccaatt tcaagccttt
     3421 tttggcgggc cggggcgcgg tttcggcaga ggtgttttca ggcggcgtgt cggggcgata
     3481 cgcttccaat tcaaacccca taccttcgcc ggtctcccgt gcgaaaaggc tgaggacgtg
     3541 tccgacaggt atccatatgt cgtgcgcctg tccgccgaag cgggcggaaa agctgatcca
     3601 atcgttgtcg atttgaaggt tttgcgtggc ggtcgcgccg atgttgagca taatttcgtt
     3661 gtcgcggacg tactgcatgg ggacacgcgt gtgttcgttg acccagacaa gaatgtgcgg
     3721 cgtgaggctg ttatcgctgc accattcgca aagtgcgcgg aggatgtagg gtttggtgga
     3781 agtgggcata atgggttccg tgtggtgtgc ctgaatgtga aaatgcctac aaaacggcgg
     3841 gttttgcaag cattccgggc ttatttgcgc atggcttttt cggcgggtgt cagtgcttcg
     3901 ataaaggctt cgcgctggaa gatgcgctcg gcgtatttga gcagcggcgc ggcacttttg
     3961 cccagtttga catcgtagtg gtcgagccgc cacagcagcg gagcaagggc gacatcaatc
     4021 atagaaaaat cttcgccgag gatgtatttg cttttgctga acgaaggggc aagcatggtc
     4081 agaccgttgc cgatggcttc gcgcgctttt gcctgttcct tgttggtggc ggcggggttt
     4141 tctaacactt ggacgtggtt gaacaattct ttttccatac ggtacagcac cagccggccc
     4201 cggccgcgca taacgggatc gccgggcata agctgcggat gagggaagcg ttcgtcgatg
     4261 tattcgttga tgatgttgga ctcgtgcagc accaaatcgc gctcgaccag cacgggaact
     4321 tggttatacg gattcatgac ggcgaggtct tcgggtttgt tgtaaatatc gacgtctttg
     4381 atttcaaaat ccataccttt ttcgtacaaa acgaagcggc agcggtggct gaaggggcag
     4441 gtaatgccgg aatagagggt catcataata attgtcgctc ctgtgtgatg cctgcaaaac
     4501 ggctgattta taaaggttta atcgcgcaat tatacgcgat ttccggcact taatccagaa
     4561 attcggctca atctgttgtt tttaatatat tttccccgat tttccgtatc agtgcgaact
     4621 tactgtcttt gttgcgcggg cgcgcaccct gccagaccgt ctgccagcct tgcgacgcat
     4681 ccgcattttg gggcaagcgg acgatacggt agcggcattg tacatcgccg acgcggtgcg
     4741 gcaatgtgcc gtactgcgtc caaacaatcc gcgtgtgcag gtcgccgccg cctatgtcga
     4801 tacactcgat gccgtctgaa agctcccgtt ttaattccgg ggaaagcgat gcctccatac
     4861 tccggacgac cggcgcgtgg cttttcgccg cgtccagcca cggcaggaac agcgtcatca
     4921 gcaaagccca ggtcagggta acgcctgccg cccagttggt aaccgcctgc ctgccgcgta
     4981 tgtttttccg ggtaatcgcc cacagccaca agggtgtgaa cagtacggca accgccatcg
     5041 gaatgggatc gatatcagga acataatacg ggctgaaata ggcggcgcgt tcggcaagct
     5101 tggcgggcca gccgtaattc atggcgaaaa agcccgtcca caggaacacg gcaaacagtc
     5161 cgaacgccat aatgccgaac cagttgacaa acgccgccgc gccgcgcctc aggctgtcca
     5221 gttgcgccgc gccgaacagg gcaagcggcg gcagcagcca gacgaggttg tcctgaaaac
     5281 gctgcggatt ggcggcgagc agcaccaaaa cggcaagcat ccacacaacg cccaaaatcc
     5341 cccagtcggt cgaaaacagg cgcgtgcggc aaaccgtcca aaccgccagc ggcagcgcgg
     5401 gcagtgcaaa ccaaagcagg tttttcagat agtaaaacaa actgaatgcc gtctgaacgt
     5461 gccgcacgcc gccgaacgta ccgaaaacgt gatcgtcgag ccattgcgcg aacagcgcgg
     5521 gctgcgtttt tgccaagagc agcgggtaaa cggtcatcag cggcagggca aaggcaagcg
     5581 aggcgactgc cgtcaacatc aaacgcctgc tttgccacgg acggaaaaac atcagcactg
     5641 gcaggggcag catcagggca aatgctgccg gataagctgc tgccaacgac atcagcgtcc
     5701 aacccgtacc gagcagaaaa gaggcggcaa tcacacggcg gcacgccagc gagtagccgt
     5761 gcagcaccag tccggcggcg gcaaaggcgg cggcagcggg attgagaaag tgtacggtcg
     5821 gaatcagccc gatacagccg ataaggatta aaacaacgct gcgcccgtgg tgtctgccca
     5881 aaaagttgaa accggcaaag ccgcaggaag tcagtccgac aacggcgaaa aacacgcctg
     5941 caaagcgtgc ggcatcgtat gagtcggcag cccacggcga cagcaaatgt ttgaacgcgg
     6001 cggcaaccca aagatacacg ggcggtatgc cgaaatcggt ttgaccgaac agatgggcaa
     6061 ccaagggggt ggggctgcct gccagtgctt cgacggcggt atagacggca ggttcggcag
     6121 gattccataa atcatgtgaa aatacacccg gccacaacca ggcaaacgcc atcaac
//
LOCUS       DBBZXU010000109         6050 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.109, whole genome shotgun sequence.
ACCESSION   DBBZXU010000109 DBBZXU010000000
VERSION     DBBZXU010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 6050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.109"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(84..1487)
                     /gene="mtrE"
                     /locus_tag="ACJJDE_001799"
     CDS             complement(84..1487)
                     /gene="mtrE"
                     /locus_tag="ACJJDE_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MtrE"
                     /protein_id="HGG7541681.1"
                     /translation="MDTTLKTTLTSVAAAFALSACTMIPQYEQPKVEVAETFKNDTAD
                     SGIRAVDLGWHDYFADPRLQKLIDIALERNTSLRTAVLNSEIYRKQYMIERNNLLPTL
                     AANANDSRQGSLSGGNVSSSYKVGLGAASYELDLFGRVRSSSEAALQGYFASTANRDA
                     AHLSLIATVAKAYFNERYAEEAMSLAQRVLKTREETYKLSELRYKAGVISAVALRQQE
                     ALIESAKADYAHAARSREQARNALATLINQPIPDDLPAGLPLDKQFFVEKLPAGLSSE
                     VLLDRPDIRAAEHALKQANANIGAARAAFFPSIRLTGTVGTGSAELGGLFKSGTGVWS
                     FAPSITLPIFTWGTNKANLDVAKLRQQAQIVAYESAVQSAFQDVANALAAREQLDKAY
                     DALSKQSRASKEALRLVGLRYKHGVSGALDLLDAERSSYAAEGAALSAQLTRAENLAD
                     LYKALGGGLKRDTQTDK"
     gene            complement(1542..4745)
                     /gene="mtrD"
                     /locus_tag="ACJJDE_001800"
     CDS             complement(1542..4745)
                     /gene="mtrD"
                     /locus_tag="ACJJDE_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MtrD"
                     /protein_id="HGG7541682.1"
                     /translation="MAKFFIDRPIFAWVISIFIIAAGIFGIKSLPVSQYPSVAAPTIT
                     LHATYPGASAQVMEDSVLSVIERNMNGVEGLDYMSTSADSSGSGSVSLTFTPDTDENL
                     AQVEVQNKLSEVLSTLPATVQQYGVTVSKARSNFLMIVMLSSDVQSTEEMNDYAQRNI
                     VPELQRIEGVGQVRLFGAQRAMRIWVDPKKLQNYNLSFADIGSALSAQNVQISAGSIG
                     SLPAVRGQTVTATVTAQGQLGTAEEFGNVILRANTDGSNVYLKDVARVGLGMEDYSSS
                     TRLNGVNTTGMAVMLSNSGNAMATAKAVKERMATLEKYFPQGMSWKTPYDTSKFVEIS
                     IEKVIHTLIEAMVLVFVVMYLFLQNIRYTLIPTIVVPISLLGGFAFISYMGMSINVLT
                     MFAMVLVIGIVVDDAIVVVENVERIMAGEGLPPKEATKKAMGQISGAVIGITAVLISV
                     FVPLAMFSGATGNIYKQFALTMASSIAFSAFLALTLTPALCATMLKTIPKGHHEEKKG
                     FFGWFNKKFNSWTHGYEGRVAKVLRKTFRMMVVYIGLAVVGVFLFMRLPTSFLPTEDQ
                     GFVMVSVQLPAGATQERTNATLAQVTQLAKSIPEIENIITVSGFSFSGSGQNMAMGFA
                     ILKDWNERTAPGSDAVAIAGKLTGMMMGTLKDGFGIAVVPPPILELGNGSGLSINLQD
                     RNNTGHTALLAKRNELIQKMRASGLFDPSTVRAGGLEDSPQLKIDINRAAAAAQGISF
                     ADIRTALASALSSSYVSDFPNQGRLQRVMVQADEDARMQPADILNLTVPNKSGVAVPL
                     STIATVSWENGTEQSVRFNGYPSMKLSASPATGVSTGQAMAAVQKMVDELGGGYSLEW
                     GGQSREEAKGGSQTLILYGLAVAAVFLVLAALYESWSIPLAVILVIPLGLIGAAAGVT
                     GRNLFEGLLGSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKDLQAQGKSAVEAAL
                     EAARLRFRPIIMTSFAFILGVVPLYIAGGASSASQRAIGTTVFWGMLIGTLLSVFLVP
                     LFYVVVRKFFKETAYEHEMAIRHASEAGITGSNDSQH"
     gene            complement(4757..5995)
                     /gene="mtrC"
                     /locus_tag="ACJJDE_001801"
     CDS             complement(4757..5995)
                     /gene="mtrC"
                     /locus_tag="ACJJDE_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit MtrC"
                     /protein_id="HGG7541683.1"
                     /translation="MAFYAFKAMRAAALAAAVALVLSSCGKGGDAAQGGQPAGREAPA
                     PVVGVVTVHPQTVALTVELPGRLESLRTADVRAQVGGIIQKRLFQEGSYVRAGQPLYQ
                     IDSSTYEANLESARAQLATAQATLAKADADLARYKPLVAAEAVSRQEYDAAVTAKRSA
                     EAGVKAAQAAIKSAGINLNRSRITAPISGFIGQSKVSEGTLLNAGDTTVLATIRQTNP
                     MYVNVTQSASEVMKLRRQIAEGKLLAADGVIAVGIKFDDGTVYPEKGRLLFADPAVNE
                     STGQITLRAAVPNDQNILMPGLYVRVLMDQVAVDNAFVVPQQAVTRGAKDTVMIVNAQ
                     GGMEPREVTVAQQQGTNWIVTSGLKDGDKVVVEGISIAGITGAKKVTPKEWAPSENQA
                     AAPQSGVQTASEAKTASEAE"
BASE COUNT         1364 a         1710 c         1617 g         1359 t
ORIGIN      
        1 actggttttt gttaatccac tataaagaaa gaaatgccgt ctgaaacctt atcgtttcag
       61 acggcatttt attgcccgac cggttatttg tcggtttggg tatcccgttt caatccgccg
      121 ccgagtgcct tgtacaaatc ggcaaggttt tcggcgcggg tcagttgtgc cgacaaagcc
      181 gcaccctccg ccgcatagct gctgcgttcc gcatcgagca agtcgagcgc gccggatacg
      241 ccgtgcttgt aacgcaggcc gaccaagcgc aacgcttctt tagaggcgcg gctttgtttg
      301 cttaaagcgt cataggcttt atccagctgc tcgcgcgccg ccaatgcgtt tgccacgtct
      361 tgaaatgcgg attggacggc ggattcatag gcaacgattt gtgcctgttg gcgcagcttg
      421 gctacatcaa ggttcgcctt gttcgtaccc caggtaaaaa tcggcagggt aatagacggc
      481 gcgaacgacc aaacgcccgt gccgcttttg aacaacccac ccaattcggc agaacccgta
      541 ccgacggttc cggtcaggcg gatggatggg aaaaaggcgg cgcgtgccgc accgatattg
      601 gcgtttgcct gtttgagcgc gtgttcggcg gcgcgtatgt cgggacggtc gagcaatact
      661 tcggaactca aaccggccgg cagtttttca acaaaaaact gcttgtccaa cggcaaaccg
      721 gcgggcaggt cgtcgggtat cggttggtta atcaaggttg ccaaggcatt gcgcgcctgt
      781 tcgcggctgc gcgcggcatg ggcataatcg gctttggcag attcgattag ggcttcctgc
      841 tgacgtaggg cgacggcgga aatcacgcct gccttgtaac gtaattcgga cagcttgtag
      901 gtttcctcgc gcgttttcaa aacacgttgc gccaaagaca tcgcttcttc ggcgtaacgt
      961 tcgttgaaat aggctttggc aacggtggca atcaggctca aatgtgccgc atcgcggttg
     1021 gcggtgctgg cgaaatagcc ttgcagtgcc gcctcgctgc tgctgcgtac acgcccgaac
     1081 agatcgagtt cgtaagatgc cgcacccagt ccgactttgt agctgctgct tacattgccg
     1141 ccgctcaagc tgccttggcg cgagtcgttc gcattggcgg caagcgtggg caggaggttg
     1201 ttgcgctcaa tcatgtattg tttgcggtag atttcgctgt tcaatacggc ggtacgcaaa
     1261 ctggtattgc gctcgagtgc gatgtcgatc agcttttgca ggcgcgggtc ggcaaaatag
     1321 tcatgccaac ctaaatcgac cgcacggatg ccgctgtcgg cggtatcgtt tttgaacgtt
     1381 tcggcaactt cgactttggg ctgctcgtat tggggaatca tggtgcaggc ggataatgcg
     1441 aaggctgctg caacagaagt caaggtggtt ttcaatgtag tatccataaa aaagtcctga
     1501 tgccgtctga aaacccgtag gcgttcagac ggcatggttg cttaatgttg gctgtcgttc
     1561 gaaccggtta tgcccgcttc tgatgcatgt ctgatcgcca tttcatgctc gtatgcagtt
     1621 tctttgaaga atttgcgcac caccacatag aaaagcggaa caaggaacac ggacaagagc
     1681 gtgccgatga gcatccccca gaatacggtt gtaccaatgg cgcgctggct ggcagaactt
     1741 gcaccgccgg caatatacag gggaaccacg cccaaaataa aggcgaacga ggtcatgata
     1801 atcggacgga aacgcaggcg ggctgcttcc aaagcggctt caaccgcgct tttcccttgc
     1861 gcttgaaggt ctttggcaaa ctcgataatc aaaatcgcgt ttttcgcact caaacccatc
     1921 acggtaacga aaccgacttg aaagtagatg tcgttggcga acgagggaac gctgcccaac
     1981 agtccttcaa acaggttgcg cccggttacg cccgcagccg caccgatcaa acccaacgga
     2041 atcacaagga tgaccgccag cggaatcgac cagctttcat aaagcgcggc aagtaccaaa
     2101 aatacggctg caaccgccaa accgtacaaa atcagggttt gcgagccgcc ttttgcctct
     2161 tcgcgcgact gtccgcccca ctccaggctg taaccgccgc ccaattcgtc aaccattttt
     2221 tgaaccgccg ccatagcctg cccggtggaa acgccggttg caggcgaagc ggacagcttc
     2281 atcgaaggat aaccgttgaa gcgtacgctc tgttccgtac cgttttccca agaaacagta
     2341 gcaatggtgg aaagcggtac ggcgacgccg gatttgttcg gcacggtcag gttcaaaata
     2401 tcggcaggct gcatacgggc atcctcgtcg gcctgcacca tcacgcgttg cagacggcct
     2461 tggttcggga agtcgctgac ataagacgaa ctcagcgcac ttgccaatgc ggtgcggatg
     2521 tcggcaaacg aaatgccttg cgccgccgcg gcggcacggt tgatgtcgat tttcaactgc
     2581 ggcgagtctt ccaaaccgcc ggcacggacg gtgctggggt caaacaaacc gctggcacgc
     2641 attttctgaa tcaactcgtt gcgcttcgcc agcaatgcgg tatggccggt attgttgcgg
     2701 tcttgcaggt tgatgctcag acccgaaccg ttgcccaact ccagaatcgg aggcgggacg
     2761 acggcgatgc caaaaccgtc tttaagcgtc cccatcatca tacccgtcag cttgccggca
     2821 atcgcaacgg catcgctgcc gggcgcggta cgctcgttcc aatctttcaa tatggcaaaa
     2881 cccatcgcca tattctgacc gctgcccgaa aagctgaagc cggaaacggt aatgatgttt
     2941 tctatttcag gaatgctttt cgccagttgg gtaacttgcg ccaaagtcgc attggtgcgc
     3001 tcttgggtcg ctcctgcagg cagttgcacg ctgaccatga cgaagccttg gtcttcggtc
     3061 ggcaggaatg aagtcggcag acgcataaac aggaacacgc ccacaaccgc caagccgata
     3121 tagacaacca tcatgcggaa agtcttacgc agcactttgg caacccggcc ttcgtaaccg
     3181 tgcgtccaac tgttgaattt cttgttaaac cagccgaaga aacctttttt ctcttcgtga
     3241 tgccctttcg ggattgtctt caacattgtg gcacacaaag caggggtaag ggtcagcgca
     3301 aggaaggcgg agaatgcgat tgatgacgcc atcgtcaggg caaactgttt gtaaatattg
     3361 cccgtcgccc cgctgaacat cgccaacggt acgaacacgg aaatcagaac ggcggtaata
     3421 ccgatgaccg cgcccgaaat ctgacccatc gcttttttgg tcgcttcttt gggcggcaag
     3481 ccttcacccg ccataatgcg ctcgacgttt tcaaccacca caatcgcgtc atcgaccacg
     3541 atgccgatga ccaaaaccat cgcaaacatg gtcagtacgt taatcgacat gcccatataa
     3601 gagatgaagg cgaaaccgcc caacagcgaa atcggtacga cgatggtcgg aatcagcgta
     3661 taacggatgt tttgcaggaa gagatacatt acgacaaaca ccagcaccat cgcttcgatt
     3721 aaagtatgaa tcactttttc aatcgaaatt tcgacgaatt tggaagtatc gtaaggggtt
     3781 ttccagctca taccctgagg aaagtatttt tccaacgtcg ccatgcgttc tttaaccgcc
     3841 tttgccgtcg ccatcgcatt gccgctgttg gacagcatca ccgccatacc ggtggtattt
     3901 acaccgttca gacgggttga ggaagaatag tcttccatac ccagtccgac ccttgccaca
     3961 tccttcaggt aaacattaga accgtcggta ttggcgcgga ggatgacgtt gccgaattct
     4021 tctgccgtac ccaactgccc ttgcgccgtt acggtagccg taaccgtctg tccgcgaacg
     4081 gcgggaagcg aaccgataga acccgctgaa atctggacgt tctgggcgga cagcgcgctg
     4141 ccgatatcgg caaacgacaa attgtagttt tgcagtttct taggatcaac ccaaatccgc
     4201 atcgcgcgtt gcgcgccgaa caggcgtacc tgccccacgc cttcgatacg ctgcagttcg
     4261 ggaacgatat tacgctgcgc gtagtcgttc atctcttcgg ttgactgcac atccgacgaa
     4321 agcatcacaa tcatcaggaa attggaacgc gccttggata cggttacgcc gtattgctgg
     4381 acggttgccg gcagcgtgct caatacttcg gaaagcttgt tctgcacttc cacctgcgcc
     4441 agattctcgt cggtatcggg cgtaaaggtc aggctcacgc tgccgctgcc gctcgaatcg
     4501 gcggaagtgg acatataatc caaaccttcc acgccgttca tattccgctc gatcacggaa
     4561 agcacgctgt cttccattac ctgcgcggac gcacccggat aagtggcgtg caaagtaatg
     4621 gtcggggcgg cgacagacgg atattgcgaa acaggcaggc ttttgatgcc gaaaataccc
     4681 gccgcaataa tgaaaatcga aataacccac gcaaaaatag ggcggtcgat aaaaaattta
     4741 gccatcgatg ccttccttat tccgcttcag aagcagtttt ggcttcagat gccgtctgaa
     4801 cgccggattg aggcgcggcg gcttggtttt cagacggcgc ccattctttg ggcgttacct
     4861 ttttcgcacc cgttataccg gcgatactga tgccttccac aaccaccttg tccccgtcct
     4921 tcagacccga cgtaacaatc caattcgtac cctgctgttg cgcaaccgtt acctcgcggg
     4981 gttccatacc gccttgggca ttcacaatca tcacggtatc tttcgcaccg cgcgttaccg
     5041 cctgctgcgg cacaacaaat gcgttatcca ccgccacttg gtccatcagc acgcgcacat
     5101 acaggccggg catcaggata ttctgatcgt tcggtacggc ggcgcgcagg gtaatctgac
     5161 cggtcgattc gttgacggcc ggatcggcaa acagcaggcg gcctttttca gggtaaactg
     5221 tgccgtcgtc aaatttgatg ccgaccgcaa tcacaccatc cgccgccagc agtttgcctt
     5281 cggctatctg acggcgcagt ttcatcactt cggatgcaga ctgggtaacg ttcacataca
     5341 tcggattggt ttggcggatg gttgccagca cggtcgtatc gcccgcattc aacagcgtac
     5401 cttcggaaac tttggactga ccgataaagc cggaaatcgg cgcggtaatg cgcgaacggt
     5461 tcagattaat gccggcagat ttgattgccg cctgtgctgc tttgacacct gcctcggcag
     5521 aacgtttcgc cgttaccgca gcatcgtatt cctgccggct gacggcttcg gcggcaacca
     5581 aaggcttgta tcgcgccaaa tccgcatccg ctttggcaag cgttgcctga gccgttgcca
     5641 gttgcgcgcg cgcgctttcc agatttgctt cataagtgga actgtcgatc tgatacagcg
     5701 gctgtccggc acggacataa ctgccttctt ggaacaggcg tttttggata atgccgccaa
     5761 cttgcgcacg gacatcggcg gtacgcagcg attccaaacg tcccggcaac tcgacggtca
     5821 acgcaacggt ttgcggatgg acggttacga caccgacgac gggagccggt gcttcccgac
     5881 ccgcaggctg cccgccctgc gccgcgtctc cgcctttacc gcaagacgac agtaccaatg
     5941 caacggcggc agccaacgcg gccgcacgca tcgccttaaa agcataaaaa gccattattt
     6001 atcctatctg tctggtttga tgtaaagggt tttgccaatc aacaggcatt
//
LOCUS       DBBZXU010000110         5994 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.110, whole genome shotgun sequence.
ACCESSION   DBBZXU010000110 DBBZXU010000000
VERSION     DBBZXU010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5994)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5994)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5994
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.110"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            165..1277
                     /gene="nadA"
                     /locus_tag="ACJJDE_001802"
     CDS             165..1277
                     /gene="nadA"
                     /locus_tag="ACJJDE_001802"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016687379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008987 - quinolinate synthetase A
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HGG7541684.1"
                     /translation="MQTAARRSFDYDMPLIQTPTSACQIRQAWAKVADTPDRETADRL
                     KDEIKALLKEKNAVLVAHYYVDPLIQDLALETGGCVGDSLEMARFGAEHEAGTLVVAG
                     VRFMGESAKILCPEKTVLMPDLEAECSLDLGCPEEAFSAFCDQHPDRTVVVYANTSAA
                     VKARADWVVTSSVALEIVSYLKSRGEKLIWGPDRHLGDYIRRETGADMLLWQGSCIVH
                     NEFKGQELAALKAEHPDAVVLVHPESPQSVIELGDVVGSTSKLLKAAVSRPEKKFIVA
                     TDLGILHEMQKQAPDKEFIAAPTAGNGGSCKSCAFCPWMAMNSLGGIKYALTSGRNEI
                     LLDRKLGEAAKLPLQRMLDFAAGLKRGDVFNGMGPA"
     gene            1329..2837
                     /gene="nadB"
                     /locus_tag="ACJJDE_001803"
     CDS             1329..2837
                     /gene="nadB"
                     /locus_tag="ACJJDE_001803"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008734 - L-aspartate oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HGG7541685.1"
                     /translation="MQTDCDVLIAGNGLAALTLALSLPESFRIVILCKNRLDDTASRH
                     AQGGIAAAWSGEDDIEKHVADTLEASAGLCDEAAVRTILSQGKPAIEWLLAQGVAFDR
                     NHNDLHLTREGGHTCRRIAHVADYTGEAVMQSLLAQIRRRPHIRVCERQMALDIQTES
                     GVACGLIVLDRRTQETYLIRARHTVLAGGGLGQIYAATTTPPECTGDAIAMAIRAGCA
                     VENLEFIQFHPTGLARSSENGRTFLISEAVRGEGGILTNQAGERFMPYYDRRAELAPR
                     DIVARAIAAEIAKQTQDFVSLDISHQPAAFVRRHFPSIHRHCLSQCGLDITRQAIPVR
                     PVQHYTCGGIQTDPCGRTSLPQLYSLGETACTGLHGANRLASNSLLECVVTARLAAQT
                     IADGQAFQAKTSPRPSESLSSEAGIFSDGIQSAFSRPVLQAFNQRHLGILRNDTGLRC
                     AIAQLRLWKQNQTEPHTASEYENRNLLECSLAVAQAAYRRRQNIGAHFNSDC"
     gene            complement(3015..3680)
                     /gene="pgmB"
                     /locus_tag="ACJJDE_001804"
     CDS             complement(3015..3680)
                     /gene="pgmB"
                     /locus_tag="ACJJDE_001804"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008801 - beta-phosphoglucomutase activity
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HGG7541686.1"
                     /translation="MTFTAVLFDLDGVITDTAEYHYRAWKKLAEELGIGIDRKFNEQL
                     KGVSRDDSLKRILAHGGKTVGEAEFAELTRRKNDNYVEMIQAVKPEDVYLGILPLLEA
                     LKANGKKIALASASKNGPFLLERMGLTHFFDTVADPAAVAHSKPAPDIFLAAAEGVGA
                     DIRRCIGIEDAAAGVAAIKAAGALPIGVGKAEDLGSDIALVSDTAELTYAYLQNVWAQ
                     SGR"
     gene            complement(3693..5951)
                     /locus_tag="ACJJDE_001805"
     CDS             complement(3693..5951)
                     /locus_tag="ACJJDE_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HGG7541687.1"
                     /translation="MYTRIMEISPWTLRSAKLEKEHKRLQESLTSLGNGYMGMRGSFE
                     ETYSADSHLGTYIAGVWFPDKTRVGWWKNGYPKYFGKAINALNFSKVKIFVDGQEVDL
                     AKNDVAGFSVELDMQHGVLRRSFTVFGVRFDVCKFLSVAQKELAVIRWEAVSVDGKTH
                     QVRIDSIIDADVKNEDSNYEEKFWQVLDKGVSDSLSYIAAQTVANPFGVEQFIVNAEQ
                     TFAGSFKALGGSQTDWQVSNSFESEVGGTPKTFEKRVIVTTSRDYQGLEAVKAAGRAL
                     SEKVAGVAFETLLDAHKAGWLHRWEIADVVIEGSDEAQQGIRFNLFQLFSTYYGEDAR
                     LNIGPKGFTGEKYGGATYWDTEAYAVPLYLALAEPEVTRNLLQYRRNQLPQAQHNARE
                     QGLAGALYPMVTFTGIECHNEWEITFEEIHRNGAIPYAIYNYTNYTGDESYLAKEGLE
                     VLVEVSRFWADRVHFSKRSGKYMIHGVTGPNEYENNINNNWYTNTLAAWVLDYTREAL
                     AKYPRPDLNVSAAELEKWADISANMYRPHDEELGVFVQHDGFLDKDIRPVSALSPDDL
                     PLNQKWSWDKILRSPFIKQADVLQGIYFFGDRFNIDEKRRNFDFYEPMTVHESSLSPC
                     IHSILAAELGKEEKAVEMYRRTARLDLDNYNNDTEDGLHITSMTGSWLAIVQGFAQMK
                     TWGGKLSFAPFLPSAWTGYTFHINYRGRLIKVAVGKENVVFTLLKGEPLDLQVYGKDI
                     TLNGSHTAALEK"
BASE COUNT         1241 a         1672 c         1747 g         1334 t
ORIGIN      
        1 ccaaagcggt ttgtcggaac gaagcgggtc ggttttacgg tatcgcaaac ctgttttcag
       61 acgaccttgc ttattatact caatttgagc ataatataaa aatatttcaa aatataaacg
      121 gcaaatcttt atgccgtctg aaaaaccagc cataaggaag tctcatgcaa accgccgccc
      181 gccgctcgtt cgactacgat atgccactca tccaaacgcc gacttccgcc tgccaaatcc
      241 gtcaggcgtg ggcgaaggtt gccgacacgc ccgaccgcga gacggcagat cgtctgaaag
      301 acgaaatcaa ggctttgctg aaggagaaaa acgcggtctt ggtggcgcat tattatgttg
      361 atccgctgat tcaggatttg gctttggaaa cgggcggatg cgtgggcgat tctctggaaa
      421 tggcacgctt cggcgcggaa cacgaagccg gtacgctggt ggtggcgggc gtgcgtttca
      481 tgggagagag cgcgaaaatc ctctgccctg aaaaaacggt gctgatgcct gatttggaag
      541 cggaatgttc tttggatttg ggttgcccgg aagaggcgtt ttcggcgttt tgcgaccaac
      601 accccgaccg cacggtggtg gtgtacgcca acacttccgc cgccgtgaaa gcgcgtgccg
      661 attgggtggt aacgtcttcg gtggcgttgg aaatcgtgtc gtatctgaaa tcgcgcggcg
      721 agaagctgat ttgggggccc gaccgccacc tcggcgacta catccgccgc gaaacgggcg
      781 cggatatgct gttgtggcag ggttcgtgca tcgtccacaa cgaatttaaa gggcaggagc
      841 tggcggcgtt gaaggcggaa caccccgatg cggtggtgct ggttcatccc gaatcgccac
      901 aaagcgtcat cgaactgggc gacgtggtcg gctcgaccag caaactgctg aaagctgccg
      961 tatcacgccc cgaaaaaaaa ttcatcgtgg cgaccgattt gggcatcctg cacgaaatgc
     1021 aaaagcaggc gcccgacaaa gaatttatcg ccgcgccgac ggcgggcaac ggcggaagtt
     1081 gcaaaagctg cgcgttctgc ccgtggatgg cgatgaattc gctgggcggc atcaaatacg
     1141 ccctgacaag cggacgtaac gaaatcctgt tggacaggaa gctgggcgaa gccgccaaac
     1201 tgcctttgca gcgtatgctc gacttcgcgg caggactcaa acgcggggat gtgttcaacg
     1261 gcatggggcc cgcctgattt gccgtccata ttgccgtttc agacgacctc tccaacaagg
     1321 acaacaccat gcaaaccgat tgcgacgtat tgattgccgg aaacgggctg gcggcactga
     1381 cgctcgccct gtcgctgcct gaatcgttcc gcatcgtcat tttgtgcaaa aaccggctgg
     1441 acgacaccgc cagccgtcat gcgcaaggcg ggattgcggc ggcgtggtcg ggagaggacg
     1501 acatcgaaaa acacgtcgcc gatactttgg aagcgagcgc aggtttgtgc gacgaagccg
     1561 ccgtccgcac catcctgtcg cagggcaaac cggcaatcga atggctgttg gcgcagggtg
     1621 tggcgttcga ccggaatcat aacgacctgc acctgacgcg cgaaggcggg catacctgcc
     1681 gccgaatcgc ccacgtcgcc gactacacgg gcgaagccgt catgcagagc ctgcttgccc
     1741 aaatacgccg ccgcccgcac atccgcgttt gcgagcggca gatggcgttg gacattcaaa
     1801 ccgaatcagg tgtggcgtgc ggactgatcg tccttgaccg ccgaacgcaa gaaacctacc
     1861 tcatccgcgc ccgccatacc gtactcgcag gcggcggctt gggacagatt tacgccgcca
     1921 ccaccacgcc gcccgaatgc acgggcgacg ccatcgccat ggcgatacgc gcaggctgcg
     1981 cagtcgaaaa cctcgaattt atccaattcc accccacagg cttggcaaga tcgtctgaaa
     2041 acggccgcac cttcctgatt tccgaagccg tgcgcggcga aggcggcatc ctgaccaacc
     2101 aagcgggcga acggtttatg ccgtattacg accgccgcgc cgaactcgcg ccgcgcgaca
     2161 tcgttgcccg cgccatcgcc gccgaaatcg ccaaacaaac gcaagacttc gtctcactcg
     2221 atatcagcca tcaacccgca gcgttcgtcc gccggcattt cccgtccatc catcggcact
     2281 gtttatccca atgcggcctg gatatcacgc gccaagccat ccccgtccgc cccgtgcaac
     2341 actacacctg cggcggcatc caaaccgacc cctgcggcag aacttccctg ccgcagctct
     2401 actccttagg cgaaaccgcc tgcaccggct tgcacggagc caaccgcctt gccagcaact
     2461 ccctgctcga atgtgtcgtt accgccagac ttgccgccca aaccatcgca gacggacaag
     2521 cattccaagc caaaacgtct ccaaggccgt ctgaaagcct ctcctccgaa gcaggcatct
     2581 tttcagacgg catccaaagc gcattcagcc gccccgtcct gcaagcgttc aaccaacgcc
     2641 atctgggcat cctccgcaac gataccggtc tgcgctgcgc catcgcccag ctgcggcttt
     2701 ggaaacaaaa ccaaaccgaa ccgcacaccg cgtccgaata cgaaaaccgc aacctgctcg
     2761 aatgcagcct cgccgtcgcc caagccgcat acaggcggag acagaacatc ggcgcgcatt
     2821 ttaatagtga ttgttaaggt tggctggtta gaaaaaaaat cgttcaaata aatttgaata
     2881 gcatggttaa gaaattggca tttagttttt agggttgcgt aagttgggtt atcaatctgt
     2941 tctaaaagca gaaaggccgt ctgaaacact gttcagacgg ccttttactt ccttgacact
     3001 ttatctgacg cgttttacct gcccgactgt gcccacacgt tttgcaggta ggcgtaggtc
     3061 agctcggcgg tatcggacac cagcgcgatg tcgctgccca agtcttcggc tttgcccacg
     3121 ccgataggca aggcgccggc ggctttgatg gcggcgacac ctgcggcagc gtcttcaatg
     3181 ccgatgcagc ggcggatgtc cgcgcccacg ccctcggcgg cggcgaggaa gatgtcgggg
     3241 gcgggtttgg aatgcgcgac ggcggcaggg tcggcgacgg tgtcgaagaa gtgggtcagc
     3301 cccatgcgtt cgagcaggaa ggggccgttt ttactggcgg acgcaagggc gatttttttg
     3361 ccgtttgctt ttaatgcttc cagcagcggc aaaatgccga gatacacgtc ttcgggtttg
     3421 actgcctgaa tcatctcgac gtagttgtcg tttttgcggc gggtcagttc ggcgaactcg
     3481 gcttcgccga cggttttgcc gccgtgtgcg aggatgcgtt tgagcgaatc gtcgcgcgac
     3541 acgcctttga gctgctcgtt aaacttgcgg tctatgccga tgcccagttc ttcggcgagc
     3601 tttttccatg cgcggtagtg gtattcggcg gtgtcggtga tgacgccgtc gagatcgaag
     3661 agcactgcgg taaacgtcat tttgcgccct ccttattttt ccaacgcggc ggtatggctg
     3721 ccgttgagtg tgatgtcttt gccgtacacc tgcaaatcga gcggctcgcc tttgagcagg
     3781 gtgaagacga cgttttcttt gccgacggcg actttaatca gacggcctcg gtagttgata
     3841 tggaaggtgt agcctgtcca cgcgctcggc aggaacggtg cgaagctgag tttaccgccc
     3901 caagttttca tttgggcgaa accttggacg atggcgagcc acgagccggt catagaagta
     3961 atgtgcaggc cgtcttcggt gtcgttgttg tagttgtcca agtccaggcg tgcggtgcgc
     4021 cggtacattt ccacggcttt ttcttctttg cccagttcgg cggcgagaat agagtggata
     4081 cacggcgaca acgagctttc atgcacggtc atcggttcgt agaagtcgaa gttgcggcgt
     4141 ttttcgtcga tattgaaacg gtcgccgaag aaatagatgc cttgcaatac gtccgcctgt
     4201 ttgataaagg gcgaacgcag gattttgtcc cacgaccatt tctggttgag cggcaaatcg
     4261 tcgggcgaaa gcgcggacac ggggcggatg tctttgtcga ggaagccgtc gtgttgcacg
     4321 aatacgccga gttcttcgtc atgaggacgg tacatattcg cgctgatgtc cgcccatttt
     4381 tccaactcgg cggcgctcac gttcaaatcc ggacgcgggt atttcgccag ggcttcgcgg
     4441 gtgtagtcca atacccatgc ggcgagggtg ttggtgtacc agttgttgtt gatgttgttt
     4501 tcgtattcgt tcgggccggt tacgccgtga atcatgtatt tgccgctgcg tttggagaag
     4561 tggacgcggt ccgcccagaa gcgggacact tcgaccaaga cttccaagcc ttctttggca
     4621 agatagcttt cgtcgccggt gtagttggtg tagttgtaga tggcgtaagg aatcgcgcca
     4681 ttgcggtgga tttcctcgaa ggtgatttcc cattcgttgt ggcactcgat gccggtaaac
     4741 gttaccatcg gatagagtgc gcccgccaag ccctgttcgc gcgcgttgtg ctgcgcctgc
     4801 ggcagttggt tgcggcggta ttgcagcagg ttgcgggtaa cttcgggttc cgccagtgcg
     4861 aggtagagcg gtacggcata ggcttcggta tcccaatagg tcgcgccgcc gtatttttcg
     4921 ccggtaaagc ctttggggcc gatgttcagg cgcgcgtctt cgccgtagta ggtggagaac
     4981 agttggaaca gattgaaacg gatgccttgc tgcgcttcgt cgctgccttc gatgaccacg
     5041 tcggcgattt cccaacggtg cagccagcct gctttgtgcg cgtccagcaa ggtttcaaac
     5101 gcaacgcctg cgactttttc cgacaaggcg cggcctgcgg ctttcactgc ttccaagccc
     5161 tgataatcgc ggctggtggt aacaatcacg cgtttttcaa aggttttggg cgtgccgccg
     5221 acttcggact cgaaagaatt ggagacctgc cagtcggttt ggctgccgcc gagggctttg
     5281 aagctgccgg cgaaagtttg ctcggcgttg acgataaatt gttccacgcc gaagggattg
     5341 gcgacggttt gggcggcaat gtaggagaga ctgtctgaaa cgcctttgtc caatacctgc
     5401 cagaattttt cttcgtagtt ggagtcttcg tttttcacgt cggcatcgat gatggaatcg
     5461 atgcggactt ggtgggtttt gccgtcaacg gatacggctt cccagcggat gaccgccaac
     5521 tctttttgcg cgacggacag gaatttacac acatcgaaac gcacgccgaa tacggtgaac
     5581 gagcggcgca acacgccgtg ctgcatatcg agttcgacgg agaagccggc aacatcgttt
     5641 ttcgccaagt ccacctcttg tccgtcgaca aagattttga ctttgctgaa attgagcgcg
     5701 ttgatggctt taccgaaata tttggggtag ccgtttttcc accagccgac gcgggttttg
     5761 tcgggaaacc acacaccggc gatgtaggta cccaagtggc tgtcggcgga ataggtttcc
     5821 tcaaagctgc cgcgcatacc catatagccg ttgcccaaac tggtcaggct ctcttgcagc
     5881 cgtttgtgtt ctttttccag ctttgccgaa cgcagcgtcc aagggctgat ttccataatt
     5941 cttgtgtaca tttatgaagc tcctgtttgg attgatttga gggaatggtg aaat
//
LOCUS       DBBZXU010000111         5968 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.111, whole genome shotgun sequence.
ACCESSION   DBBZXU010000111 DBBZXU010000000
VERSION     DBBZXU010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5968)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5968)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5968
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.111"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..401)
                     /locus_tag="ACJJDE_001806"
     CDS             complement(<1..401)
                     /locus_tag="ACJJDE_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEA family DNA-binding protein"
                     /protein_id="HGG7541688.1"
                     /translation="MLCPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARC
                     GLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASLQELEALPGIGPAKAKAIAE
                     YRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQA"
     gene            complement(437..550)
                     /gene="rrf"
                     /locus_tag="ACJJDE_001807"
     rRNA            complement(437..550)
                     /gene="rrf"
                     /locus_tag="ACJJDE_001807"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
     gene            complement(647..3538)
                     /locus_tag="ACJJDE_001808"
     rRNA            complement(647..3538)
                     /locus_tag="ACJJDE_001808"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            complement(3947..4022)
                     /locus_tag="ACJJDE_001809"
     tRNA            complement(3947..4022)
                     /locus_tag="ACJJDE_001809"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3987..3989),aa:Ala,seq:tgc)
     gene            complement(4028..4104)
                     /locus_tag="ACJJDE_001810"
     tRNA            complement(4028..4104)
                     /locus_tag="ACJJDE_001810"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4068..4070),aa:Ile,seq:gat)
     gene            complement(4206..5746)
                     /locus_tag="ACJJDE_001811"
     rRNA            complement(4206..5746)
                     /locus_tag="ACJJDE_001811"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1298 a         1744 c         1278 g         1648 t
ORIGIN      
        1 gcctgatcct tcagcttcgc cagcaccgca gggccgatgc cctttacctt ggtcaaatcg
       61 tctacagact tgaacgcacc gttttgcgca cggtattccg caatggcctt cgccttcgcc
      121 gggcctatgc ctggcagcgc ctccaactcc tgcagcgaag ccgcattgat gtttaccgcc
      181 gcaagggaga aggcgcagga gaacagcata cagaacagca cgaacatttt cttcatggtt
      241 tttcctttaa gggttgcaaa caataaaccg catcttgcga cgataaaacg agtcattcta
      301 aaatgaatat cccaaagttt caagccgttc ctccgcaaac ccgaccggac gccgtacgga
      361 tgccgtcccg ccatccccga cattttttcc gggcaaagca aaaacccccg aataatcggg
      421 ggttttctga atgggtgttt ggcagtgacc tactttcgca tggaagaacc acactatcat
      481 cggcgctgag tcgtttcacg gtcctgttcg ggatgggaag gcgtgggacc aactcgctat
      541 ggccgccaaa cttaaactgt tacaaatcgg taaagcctta atcaatatat tcggtaatga
      601 ctgaatcagt cagtaagctt ttatctcttg aagttcttca aatgatagag tcaagcctca
      661 cgagcaatta gtatgggtta gcttcacgcg ttaccgcgct tccacacccc acctatcaac
      721 gtcctggtct cgaacgactc tttagtgcgg ttaaaccgca agggaagtct catcttcagg
      781 cgagtttcgc gcttagatgc tttcagcgct tatctcttcc gaacttagct acccggctat
      841 gcaactggcg ttacaaccgg tacaccagag gttcgtccac tccggtcctc tcgtactagg
      901 agcagccccc gtcaaacttc caacgcccac tgcagatagg gaccaaactg tctcacgacg
      961 ttttaaaccc agctcacgta ccactttaaa tggcgaacag ccataccctt gggaccgact
     1021 acagccccag gatgtgatga gccgacatcg aggtgccaaa ctccgccgtc gatatgaact
     1081 cttgggcgga atcagcctgt tatccccgga gtacctttta tccgttgagc gatggccctt
     1141 ccatacagaa ccaccggatc actatgtcct gctttcgcac ctgctcgact tgtcggtctc
     1201 gcagttaagc taccttttgc cattgcacta tcagtccgat ttccgaccgg acctaggtaa
     1261 ccttcgaact cctccgttac gctttgggag gagaccgccc cagtcaaact gcctaccatg
     1321 cacggtcccc gacccggatg acgggtctag gttagaacct caaagacacc agggtggtat
     1381 ttcaaggacg gctccacaga gactggcgtc tctgcttcaa agcctcccac ctatcctaca
     1441 caagtgactt caaagtccaa tgcaaagcta cagtaaaggt tcacggggtc tttccgtcta
     1501 gcagcgggta gattgcatct tcacaaccac ttcaacttcg ctgagtctca ggaggagaca
     1561 gtgtggccat cgttacgcca ttcgtgcggg tcggaactta cccgacaagg aatttcgcta
     1621 ccttaggacc gttatagtta cggccgccgt ttactggggc ttcgatccga tgctctcaca
     1681 tcttcaatta accttccagc accgggcagg cgtcacaccc tatacgtcca ctttcgtgtt
     1741 agcagagtgc tgtgttttta ataaacagtc gcagccacct attctctgcg accctccggg
     1801 gcttacggag caagtcctta accttagagg gcataccttc tcccgaagtt acggtatcaa
     1861 tttgccgagt tccttctcct gagttctctc aagcgcctta gaattctcat cctgcccacc
     1921 tgtgtcggtt tgcggtacgg ttcgattcaa actgaagctt agtggctttt cctggaagcg
     1981 tggtatcggt tacttcgtgt ccgtagacac tcgtcgtcac ttctcggtgt taagaagacc
     2041 cggatttgcc taagtcttcc acctaccggc ttaaacaagc tattccaaca gcttgccaac
     2101 ctaaccttct ccgtccccac atcgcatttg aatcaagtac aggaatatta acctgtttcc
     2161 catcgactac gcatttctgc ctcgccttag gggccgactc accctacgcc gatgaacgtt
     2221 gcgcaggaaa ccttgggctt tcggcgagcg ggcttttcac ccgctttatc gctactcatg
     2281 tcaacattcg cacttctgat acctccagca cactttacaa tgcaccttca tcggcctaca
     2341 gaacgctccc ctaccatgcc ggtaaaccgg catccgcagc ttcggttata gatttgagcc
     2401 ccgttacatc ttccgcgcag gacgactcga ccagtgagct attacgcttt ctttaaatga
     2461 tggctgcttc taagccaaca tcctggctgt ctgggccttc ccacttcgtt taccacttaa
     2521 tctatcattg gggaccttag ctggcggtct gggttgtttc cctcttgaca acggacgtta
     2581 gcacccgctg tctgtctccc gaggaaccac ttgatggtat tctgagtttg ccatgggttg
     2641 gtaagttgca ataaccccct agccataaca gtgctttacc cccatcagtg tcttgctcga
     2701 ggcactacct aaatagtttt cggggagaac cagctatctc cgagtttgtt tagcctttca
     2761 cccctatcca cagctcatcc ccgcattttg caacatgcgt gggttcggtc ctccagtacc
     2821 tgttacggca ccttcaacct ggccatggat agatcactcg gtttcgggtc tacacccagc
     2881 aactcatcgc cctattaaga ctcggtttcc ctacgcctcc cctattcggt taagctcgct
     2941 actgaatgta agtcgttgac ccattataca aaaggtacgc agtcacacct ctagggtgct
     3001 cccactgttt gtatgcatca ggtttcaggt tctgtttcac tcccctcccg gggttctttt
     3061 cgcctttccc tcacggtact ggttcactat cggtcgatga tgagtattta gccttggagg
     3121 atggtccccc catattcaga caggatttca cgtgtcccgc cctacttttc gtacgcttag
     3181 taccgctgtt gagatttcga atacgggact gtcacccact atggtcaagc ttcccagctt
     3241 gttcttctat ctcgacagtt attgcgtaca ggctcctccg cgttcgctcg ccactacttg
     3301 cggaatctcg gttgatttct tttcctccgg gtacttagat ggttcagttc tccgggttcg
     3361 cttctctaag tctatgtatt caacttagga tactgcacag aatgcagtgg gtttccccat
     3421 tcggacatcg cgggatcatt gctttattgc cagctccccc gcgcttttcg caggcttaca
     3481 cgtccttcgt cgcctatcat cgccaaggca tccacctgat gcacttattc acttgactct
     3541 atcatttcaa gaacttcttt gacttcgttt gcctacctgt tgactaagta aaagcaaact
     3601 tgaaattcct actttgataa agcttactgc tttgttgtgt cttaatcctg ccttttgtgt
     3661 ttcaggatta agtcgataca atcatcaccc aaatactgtg tttgttttct tttctcttgt
     3721 gagcgatttt ttatcctttg caaagaataa aaaatcaaaa caaacgcttt gtctttgttt
     3781 gttgatttcg gctttccaat ttgttaaaga tcgatgcgtt cgatattgct atctactgtg
     3841 caaatcaaaa cgagctgatt attatatcag cattttgttc ttggtcaagt gtgatgtcgc
     3901 cctgaatgga ttctgttcca ttcttccgtt ttgatttgta cagtattggt ggaggcaaac
     3961 gggatcgaac cgatgacccc ctgcttgcaa agcaggtgct ctaccaactg agctatgccc
     4021 ccgttattgg tgggtctggg aggacttgaa cctccgaccc cacgcttatc aagcgtgtgc
     4081 tctaaccagc tgagctacaa acccggattc tcttcttaag cgaatcttgc cttcactcaa
     4141 gcttcttccg catctttttc agtttaccga taagtgtgaa tgcctaaagc ctcttctttc
     4201 tctagaaagg aggtgatcca gccgcaggtt cccctacggc taccttgtta cgacttcacc
     4261 ccagtcatga agcataccgt ggtaagcgga ctccttgcgg ttatcctacc tacttctggt
     4321 atcccccact cccatggtgt gacgggcggt gtgtacaaga cccgggaacg tattcaccgc
     4381 agtatgctga cctgcgatta ctagcgattc cgacttcatg cactcgagtt gcagagtgca
     4441 atccggacta cgatcggttt tgtgagattg gctccacctc gcggcttggc taccctctgt
     4501 accgaccatt gtatgacgtg tgaagccctg gtcataaggg ccatgaggac ttgacgtcat
     4561 ccccaccttc ctccggcttg tcaccggcag tctcattaga gtgcccaact gaatgatggc
     4621 aactaatgac aagggttgcg ctcgttgcgg gacttaaccc aacatctcac gacacgagct
     4681 gacgacagcc atgcagcacc tgtgttacgg ctcccgaagg cactcctccg tctctggagg
     4741 attccgtaca tgtcaagacc aggtaaggtt cttcgcgttg catcgaatta atccacatca
     4801 tccaccgctt gtgcgggtcc ccgtcaattc ctttgagttt taatcttgcg accgtactcc
     4861 ccaggcggtc aatttcacgc gttagctacg ctaccaagca atcaagttgc ccaacagcta
     4921 attgacatcg tttagggcgt ggactaccag ggtatctaat cctgtttgct acccacgctt
     4981 tcgggcatga acgtcagtgt tatcccagga ggctgccttc gccatcggta ttcctccaca
     5041 tctctacgca tttcactgct acacgtggaa ttctacctcc ctctgacaca ctcgagtcac
     5101 ccagttcaga acgcagttcc cgggttgagc ccggggattt cacatcctgc ttaagtaacc
     5161 gtctgcgccc gctttacgcc cagtaattcc gattaacgct cgcaccctac gtattaccgc
     5221 ggctgctggc acgtagttag ccggtgctta ttcttcaggt accgtcatca gccgctgata
     5281 ttagcaacag ccttttcttc cctgacaaaa gtcctttaca acccgaaggc cttcttcaga
     5341 cacgcggcat ggctggatca ggcttgcgcc cattgtccaa aattccccac tgctgcctcc
     5401 cgtaggagtc tgggccgtgt ctcagtccca gtgtggcgga tcatcctctc agacccgcta
     5461 ctgatcgtcg ccttggtagg cctttacccc accaaccagc taatcagata tcggccgctc
     5521 gaatagcgca aggcccgaaa gtcccctgct ttctctctca agacgtatgc ggtattagct
     5581 gatctttcga tcagttatcc cccactactc ggtacgttcc gatatgttac tcacccgttc
     5641 gccactcgcc acccaagaag caagcttctc tgtgctgccg tccgacttgc atgtgtaaag
     5701 catgccgcca gcgttcaatc tgagccagga tcaaactctt atgttcaatc tctaactttt
     5761 taacttctgg tctgcttcaa agaaaccaac aggacaatgt tcaaaacatt atcttgtctg
     5821 tctttcaaac agtgtgaggc tcaaggcact cacacttatc ggtaatctgt tttgttaaag
     5881 agcgttgcga attataaagt attccttccg cctgtcaaga tatctctcga tatccccaac
     5941 attctgtgct atacttttca gttcgtcc
//
LOCUS       DBBZXU010000112         5891 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.112, whole genome shotgun sequence.
ACCESSION   DBBZXU010000112 DBBZXU010000000
VERSION     DBBZXU010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5891)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5891)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5891
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.112"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..523
                     /gene="mafA"
                     /locus_tag="ACJJDE_001812"
     CDS             <1..523
                     /gene="mafA"
                     /locus_tag="ACJJDE_001812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7541689.1"
                     /translation="RSAGLSVNGTGDYRNETLLANPRDVSFLTNLIQTVFYLRGIEVV
                     PPEYADTDVFVTVDVFGTVRSRTELHLYNAETLKAQTKLEYFAVDRDSRKLLIAPKTA
                     AYESQYQEQYALWMGPYSVGKTVKASDRLMVDFSDITPYGDTTAQNRPDFKQNNGKNP
                     DVGNEVIRRRKGG"
     gene            527..2281
                     /gene="mafB"
                     /locus_tag="ACJJDE_001813"
     CDS             527..2281
                     /gene="mafB"
                     /locus_tag="ACJJDE_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7541690.1"
                     /translation="MKPLRRLTNLLAACAVAAAAFGQPALAADLAQDPFITDNAQRQH
                     YEPGGKYHLFGDPRGSVSDRTGQINVIQDYTHQMGNLLIQQANINGTIGYHTRFSGHG
                     HEEHAPFDNHAADSASEEKGSVNEGFTVYRLNWKGHEHHPADGYDGPQGGNYPKPTGA
                     RDEYTYHVNGTARSIKLNPTDTRSIRQRISDNYNNLGSNFSDRADEANKKIFEHNAKL
                     DRWGNSMEFVNGIAAGALNPFISAGEALGIGDILYGTRYAIDKAAMRNIAPLPAEGKF
                     AVIGGLGSVAGFEKNTREAVDRWIQENPNAAETVEALVNVLPFAKVKNLTKAAKPGKA
                     AVSGDFSKSYTCSFHGSTLVKTADGYKAIAHIQAGDRVLSKDEASGETGYKPVTTRYG
                     NPYQETVYIEVSDGIGNSQTLISNRIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQ
                     NITLKQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPYKRPNNATTKAQRESV
                     QGKPCVECGKLAEKMIADHKKPLVVEYYETGTIDKSKMRAIESVQPQCPTCSAKQGGR
                     LSQYSKEQKRKLSNGNKK"
     gene            2265..2618
                     /locus_tag="ACJJDE_001814"
     CDS             2265..2618
                     /locus_tag="ACJJDE_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541691.1"
                     /translation="MGIKNEQIIICKKYNTEIYPVSDVSKIGVAENVKQANLYPINGL
                     RHRPKGDTNGWYIWAGENFSYDKNFFLPLHTFHLQIWRPEIIPFLTLPPGYRFLIGEN
                     GYEDVWFDELLLNDN"
     gene            2608..2931
                     /locus_tag="ACJJDE_001815"
     CDS             2608..2931
                     /locus_tag="ACJJDE_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003676511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HGG7541692.1"
                     /translation="MIIDEKSTSDVLKQYQELGFDLTKSMIIEFFIEGSQKNLQSIES
                     QLISYRQDFQISIEQDEFGEMWTCYCSVNIVPSLENILAIETTLFDIAQKNDCNYEGF
                     GSYGN"
     gene            3166..3435
                     /locus_tag="ACJJDE_001816"
     CDS             3166..3435
                     /locus_tag="ACJJDE_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003693502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541693.1"
                     /translation="MSVKELFKVILDKNKDFPIRTIHRTPIGILPKPVALSIVQYEDD
                     QGFYLFYLDETGQEQTDTYHDTLDSAFEQVEFEFGISKEEWMQSP"
     gene            3417..3569
                     /locus_tag="ACJJDE_001817"
     CDS             3417..3569
                     /locus_tag="ACJJDE_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541694.1"
                     /translation="MDAKPLGGNIKMPLYFSDGISVNKKVGIGAQNSLRLAGIGMKSL
                     RKNDYS"
     gene            3556..4101
                     /locus_tag="ACJJDE_001818"
     CDS             3556..4101
                     /locus_tag="ACJJDE_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="suppressor of fused domain protein"
                     /protein_id="HGG7541695.1"
                     /translation="MIIVEHLEHYLGEIESGIKCLDRRYHLSVSVFPSQPYKGVTTFS
                     TLGLNRYDLNYKSRFELIFTCSEEWNKENIAAFLSGVAEYLIDNRQPILRGEIIQLPR
                     VIIEGSKMDALYVSAPFYFDDDFQVCYGEHYNIVFPLLVPLYKQEAELVEKKGWNAFE
                     QFLLDNEVGNLSDMNRKPFVW"
     gene            4235..4864
                     /locus_tag="ACJJDE_001819"
     CDS             4235..4864
                     /locus_tag="ACJJDE_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HINT domain-containing protein"
                     /protein_id="HGG7541696.1"
                     /translation="MVKTADGYKAIAHIRVGESVLSKDEASGKTGYKPVTAQYGNPYQ
                     ETVYIEISDGIGNSQTLVSNKIHPFYSQGKWIQAGRLKKGDTLLSESGAKQTVQNITL
                     KQQPLKAYNLTVADWHTYFVKGDKAETEGVWVHNSCPPKRTGSSKNEKHGDGGRSQIS
                     AESKIAELTNKIIPGMSKNERLKIERTIRNITKNANRKAKGEEHGRRGR"
     gene            4845..5300
                     /locus_tag="ACJJDE_001820"
     CDS             4845..5300
                     /locus_tag="ACJJDE_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541697.1"
                     /translation="MVDAVVKTPEFLPFTSVGIFRFGADITEYKNILETFMYEPPDEF
                     RTEYYESPDSNLLISVKKNKIISIFCYQELYFMGVNIIGLNFEDFKQLFHHPKSYGVD
                     KYYLSNESYPTYVYEFDEIGVQAWEAKGKIVTIIAGGKDNYSTEPYYDE"
     gene            5307..5363
                     /locus_tag="ACJJDE_001821"
                     /pseudo
     CDS             5307..5363
                     /locus_tag="ACJJDE_001821"
                     /inference="COORDINATES: protein motif:HMM:NF026864.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="toxin C-terminal domain-containing protein"
     gene            5378..5755
                     /locus_tag="ACJJDE_001822"
     CDS             5378..5755
                     /locus_tag="ACJJDE_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 41 family protein"
                     /protein_id="HGG7541698.1"
                     /translation="MCELKNFRRNITCFEGYDENSFIGKWYDDGVWDDEEYWKLENDL
                     IEVRKKYPYPMDIPRYVVIGIGTIIDFLMVPNWKLFEIKASPWLPDSVGINERYERLK
                     TMLRYIFTEKDIVNVRFDYYNKK"
BASE COUNT         1892 a         1349 c         1233 g         1417 t
ORIGIN      
        1 acgctccgcc ggactgtccg tcaacggcac gggcgactac cgcaacgaaa ccctgctcgc
       61 caacccccgc gacgtttcct tcctgaccaa cctcatccaa accgtcttct acctgcgcgg
      121 catcgaagtc gtaccgcccg aatacgccga caccgacgta ttcgtaaccg tcgacgtatt
      181 cggcaccgtc cgcagccgca ccgaactgca cctctacaac gccgaaaccc ttaaagccca
      241 aaccaagctc gaatatttcg ccgttgaccg cgacagccgg aaactgctga ttgcccctaa
      301 aaccgccgcc tacgaatccc aataccaaga acaatacgcc ctctggatgg gaccttacag
      361 cgtcggcaaa accgtcaaag cctcagaccg cctgatggtc gatttctccg acatcacccc
      421 ctacggtgac acaaccgccc aaaaccgtcc cgacttcaaa caaaacaacg gtaaaaaccc
      481 cgatgtcggc aacgaagtca tccgccgccg caaaggagga taaaccgtga aaccgctgcg
      541 cagactgaca aacctccttg ccgcctgcgc cgtagcggcc gccgccttcg gacagcccgc
      601 cctcgcggcg gacttggcgc aagacccgtt cattaccgat aacgcccaac ggcagcacta
      661 cgaacccgga ggcaaatacc acctcttcgg cgacccgcgc ggcagcgttt ccgaccgcac
      721 cggtcaaatc aacgtcatcc aagactatac ccaccagatg ggcaacctgc tcatccaaca
      781 ggcaaacatc aacggcacaa tcggctacca cacccgcttt tccggacacg gacacgaaga
      841 acacgccccc ttcgacaacc acgccgccga cagcgcaagc gaagaaaaag gcagcgtcaa
      901 cgaaggcttt accgtatacc gcctcaactg gaaagggcac gaacatcatc ccgccgacgg
      961 ctatgacggc ccgcagggcg gcaattaccc caaacctacg ggcgcacgag acgaatacac
     1021 ctatcacgtc aacggcacag cccgcagcat taaactcaat ccgaccgaca cccgcagcat
     1081 ccggcaacgc atatccgaca actacaacaa cctcggcagc aatttctccg accgcgccga
     1141 tgaagccaac aaaaaaatat tcgagcacaa tgccaagctc gaccgctggg gcaacagcat
     1201 ggagtttgtc aacggcatcg ccgccggagc actcaacccc tttatcagcg cgggcgaagc
     1261 cttaggcata ggcgacatac tgtacggaac gcgctatgcc atagacaaag ccgcaatgcg
     1321 caacatcgcc cccttacccg ccgagggcaa attcgccgtc atcggcggct tgggcagcgt
     1381 ggcgggcttt gaaaagaata cgcgcgaagc cgttgaccgg tggatacagg aaaaccccaa
     1441 tgccgccgaa accgtcgaag ccctggtcaa cgtcctgccg tttgccaaag tcaaaaacct
     1501 gacaaaggcg gcaaaaccgg ggaaggctgc ggttagtggg gatttttcta aatcctacac
     1561 ctgctccttc cacggcagca ccttggtcaa aacggcagac ggctacaaag ccattgccca
     1621 tattcaagcc ggagaccgcg tcctttccaa ggacgaggca agcggagaaa cgggatacaa
     1681 acccgttacc acccgatacg gtaatccgta ccaggaaacc gtttacattg aagtttcaga
     1741 cggcatcggc aacagccaaa ccctgatttc caaccgcatc catccgtttt acagtcaagg
     1801 aaaatggata caggcaggtc gtctgaaaaa aggcgacacc ctgctttccg aaagcggcgc
     1861 aaaacagacg gttcaaaaca ttaccctcaa acagcagccg ctcaaagcct acaacctgac
     1921 cgttgccgac tggcatactt acttcgtcaa gggagataag gcggaaacgg aaggggtgtg
     1981 ggttcataat tcttgtccgc catataagag accaaataac gcaacgacaa aagcacaacg
     2041 agaaagtgta caaggaaaac cctgcgttga atgcggtaaa ttagccgaaa aaatgattgc
     2101 cgaccataaa aaaccattag ttgtcgagta ttatgaaaca gggacaattg acaaatctaa
     2161 gatgagagca attgaatcag tacaaccgca atgtccgact tgttctgcaa aacaaggagg
     2221 gagattaagc caatattcaa aagaacagaa aaggaaactg agtaatggga ataaaaaatg
     2281 aacaaataat aatttgtaaa aaatataata cagaaatata tcctgtttcc gatgtttcaa
     2341 aaatcggtgt tgctgaaaat gtcaaacagg caaacctgta tccgattaac gggttaaggc
     2401 accgtcccaa aggtgatact aacggttggt atatctgggc cggtgaaaac ttctcctatg
     2461 ataaaaattt tttcctgccc ttgcatactt tccatttgca aatatggcga cccgaaatca
     2521 tccccttttt gacacttccg cccggttacc gttttttaat tggggaaaac ggttatgaag
     2581 acgtatggtt tgatgagttg ctattaaatg ataattgacg aaaaatctac ttcagatgta
     2641 ctgaaacaat atcaagaact agggtttgat ttgacaaaat cgatgataat agagtttttt
     2701 atagagggtt ctcaaaaaaa tctgcaatca atagaaagcc aactcatttc ttatcggcaa
     2761 gattttcaaa tcagtattga acaagatgaa ttcggagaaa tgtggacttg ctattgttcc
     2821 gtcaatatcg tcccttccct tgaaaacatt ttagctattg aaactacgtt atttgatatt
     2881 gcacaaaaaa atgattgtaa ttatgaaggt tttggttcgt atgggaacta acaagaagtg
     2941 taggttgggt tgaaaaacac aacaatcaaa aggtcgtctg aaaccatgtt taattttcag
     3001 atggcttttc cttcatttaa aacaggatat tgagatctaa gttctttaaa aatcctacac
     3061 ctgctccttc cacggcagca ccttggtcaa aacggcagac ggctacaaag ccaatggacg
     3121 tgtaatagaa aatagtgcag taacaattat tcggattaaa aaattatgag tgtaaaagaa
     3181 ttattcaaag ttatcttaga taaaaataaa gattttccta ttagaacgat tcatcgcacg
     3241 ccaataggga tacttcccaa acctgttgct ttaagtattg ttcaatatga agatgaccaa
     3301 ggattttatt tgttttattt ggatgagacc ggtcaggaac aaacggatac ttatcatgac
     3361 acattagatt cggcatttga acaggtggag tttgaatttg gaattagcaa agaagaatgg
     3421 atgcaaagcc cttaggtggc aatatcaaga tgccgcttta tttttcagac ggcatttccg
     3481 tcaataaaaa agtcggtatt ggagcccaaa acagcctacg tcttgccggg atagggatga
     3541 aatctttaag aaaaaatgat tatagttgaa catttagaac attatttggg tgaaatcgaa
     3601 agcggtataa aatgcttgga tcgacgttat catctcagcg tttccgtctt cccatcacaa
     3661 ccatataaag gggtaactac tttttctact ttaggcttga atcgatatga cttgaactat
     3721 aagagtaggt ttgaattaat ttttacctgt tctgaagaat ggaataaaga aaatattgca
     3781 gcttttctat caggagtagc cgaatatttg attgacaata gacaacctat tttaagaggt
     3841 gaaattattc aattacctag ggtaattatc gaaggtagca aaatggacgc actgtatgtt
     3901 tccgccccat tttatttcga cgatgatttt caggtctgtt atggcgaaca ctacaatatc
     3961 gttttccctt tgcttgtccc gttgtataaa caggaagcag aattggtgga aaagaaaggt
     4021 tggaatgctt ttgagcagtt cttgctggat aatgaagttg gcaacctttc ggatatgaat
     4081 cggaaaccgt ttgtttggta agggctttct taaatttgat taaaggtcgt ctgaaaccgt
     4141 gtttaacttt cagacaacct ttccttcatt tgaaacagga tattgaaaac taagtttttc
     4201 aacattctac acctgctcct tccacggcag caccttggtc aaaacggcag acggctacaa
     4261 agctattgcc catatccgag tcggcgagag cgttctttcc aaggacgagg caagcgggaa
     4321 aacaggatac aaacccgtta ccgcccaata cggtaatccg tatcaagaaa ccgtttacat
     4381 tgaaatttca gacggcatcg gtaacagcca aacccttgtt tccaataaaa tccacccgtt
     4441 ttacagtcaa ggaaaatgga tacaggcagg tcgtctgaaa aaaggcgaca ccctgctttc
     4501 cgaaagcggt gcaaaacaga cagttcaaaa cattaccctc aaacagcagc cgctcaaagc
     4561 ctacaatctg accgttgccg actggcatac ttactttgtc aaaggcgata aggcggaaac
     4621 ggaaggagtt tgggttcata attcttgtcc gcctaaaaga acaggaagct ccaagaatga
     4681 aaaacatgga gatggcggtc gaagtcaaat atcagcggaa tcaaaaattg ctgaattaac
     4741 aaataaaatt attcccggaa tgtccaaaaa tgaacgctta aagattgagc gaacaatcag
     4801 aaatattaca aaaaatgcca atcgaaaagc aaaaggagaa gagcatggtc gacgcggtcg
     4861 ttaaaactcc cgaattttta ccttttactt ctgtaggaat attccgtttt ggtgcggata
     4921 taacagagta caaaaacata ctggaaactt ttatgtatga acctcctgat gagtttagaa
     4981 cagaatatta tgaatctccc gactcaaatt tactcatttc cgtcaaaaaa aacaaaatta
     5041 tttcgatatt ttgttatcag gagctatatt ttatgggcgt taatataata ggtctgaatt
     5101 ttgaagattt taaacagctt ttccatcacc ctaaatcata cggtgttgat aaatattatt
     5161 tatcaaatga atcttatccg acatatgtct atgagtttga tgaaatagga gtacaagcat
     5221 gggaagcaaa agggaaaatt gttactatca ttgccggggg caaagacaat tattcaacag
     5281 aaccttacta cgatgaataa cattacagaa aagaaacaag aaacggtaca tttgataaaa
     5341 acctaaatcg tattggagat taattattat gtgtattatg tgtgagttaa aaaacttcag
     5401 aagaaatatt acttgttttg agggatatga cgaaaattca tttattggca aatggtatga
     5461 tgacggggtg tgggatgatg aagaatattg gaaattggag aatgatttaa tcgaggttag
     5521 aaaaaaatat ccttatccga tggatatacc aagatatgtt gtcattggaa tcggtaccat
     5581 tattgatttc ttaatggttc caaattggaa actttttgaa attaaagctt ccccttggct
     5641 acctgatagc gtaggaatta atgaacgtta tgaaaggctt aaaacaatgc tccgttatat
     5701 ttttaccgag aaagacatag tcaacgtgcg atttgattat tacaacaaaa aatagcaaac
     5761 cccggcaatc aaaatgccgt ctgaagcgat atttgctttt cagacggcat tttgatgaat
     5821 gaaacaggat attgagaact aagttcttca aaaatcctgc ctccgtccct tatacgtcgg
     5881 tgctttagtc a
//
LOCUS       DBBZXU010000113         5870 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.113, whole genome shotgun sequence.
ACCESSION   DBBZXU010000113 DBBZXU010000000
VERSION     DBBZXU010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5870
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.113"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            45..458
                     /locus_tag="ACJJDE_001823"
     CDS             45..458
                     /locus_tag="ACJJDE_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HGG7541699.1"
                     /translation="MMPAYAYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGAL
                     LCAGLANGLGSMVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLA
                     AGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA"
     gene            504..1133
                     /gene="nth"
                     /locus_tag="ACJJDE_001824"
     CDS             504..1133
                     /gene="nth"
                     /locus_tag="ACJJDE_001824"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140078 - class I DNA-(apurinic or
                     apyrimidinic site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HGG7541700.1"
                     /translation="MNRHIRQEIFERFRAANPHPTTELNFNSPFELLIAVLLSAQATD
                     VGVNKATAKLFPVADTPQAMLDLGLDGVMEYTKTIGLYKTKSKHIMQTCRILLEKYNG
                     EVPEDREALESLPGVGRKTANVVLNTAFGHPVMAVDTHIFRVSNRTKIAPGKDVREVE
                     DKLMRFIPKEFLMDAHHWLILHGRYTCKALKPQCQTCIINDLCEYPAKA"
     gene            1271..2770
                     /locus_tag="ACJJDE_001825"
     CDS             1271..2770
                     /locus_tag="ACJJDE_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegQ family serine endoprotease"
                     /protein_id="HGG7541701.1"
                     /translation="MFKKYQYLALAALCAASLAGCDKAGSFFGADKKEASFVERIEHT
                     KDDGSVSMLLPDFVQLVQSEGPAVVNIQAAPAPRTQNGSGNAETDSDPLADSDPFYEF
                     FKRLVPNMPEIPQEEADDGGLNFGSGFIISKDGYILTNTHVVTGMGSIKVLLNDKREY
                     TAKLIGSDVQSDVALLKIDATEELPVVKIGNPKDLKPGEWVAAIGAPFGFDNSVTAGI
                     VSAKGRSLPNESYTPFIQTDVAINPGNSGGPLFNLKGQVVGINSQIYSRSGGFMGISF
                     AIPIDVAMNVAEQLKNTGKVQRGQLGVIIQEVSYGLAQSFGLDKAGGALIAKILPGSP
                     AERAGLQAGDIVLSLDGGEIRSSGDLPVMVGAITPGKEVSLGVWRKGKEITVAVKLGN
                     ASEQTGSSSEPDKAPYAEHQSGTFSVESAGITLQTHTDSSGGRLVVVRVSGAAERAGL
                     RRGDEILAVGQVPVNDEDGFRKAMDKAGKNVPLLVMRRGNTLFIALNLQ"
     gene            2973..4493
                     /locus_tag="ACJJDE_001826"
     CDS             2973..4493
                     /locus_tag="ACJJDE_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaC family protein"
                     /protein_id="HGG7541702.1"
                     /translation="MQLIDYSHSFFSVVPPFLALALAVITRRVLLSLGIGILVGVAFL
                     VGGNPVDGLTHLKDMVVGLAWSDGDWSLGKPKILVFLILLGIFTSLLTYSGSNQAFAD
                     WAKRHIKNRRGAKMLTACLVFVTFIDDYFHSLAVGAIARPVTDKFKVSRAKLAYILDS
                     TAAPMCVLMPVSSWGASIIATLAGLLVTYKITEYTPMGTFVAMSLMNYYALFALIMVF
                     VVAWFSFDIGSMARFEQAALNEAHDETAASDATKGRVYALIIPVLALIASTVSAMIYT
                     GAQASETFSILGAFENTDVNTSLVFGGTCGVLAVVLCTLGTIKTADYPKAVWQGAKSM
                     FGAIAILILAWLISTVVGEMHTGDYLSTLVAGNIHPGFLPVILFLLASVMAFATGTSW
                     GTFGIMLPIAAAMAVKVEPALIIPCMSAVMAGAVCGDHCSPISDTTILSSTGARCNHI
                     DHVTSQLPYALTVAAAAASGYLALGLTKSALLGFGTTGIVLAVLIFLLKDKKRANA"
     gene            4550..5635
                     /gene="nagZ"
                     /locus_tag="ACJJDE_001827"
     CDS             4550..5635
                     /gene="nagZ"
                     /locus_tag="ACJJDE_001827"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003704507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HGG7541703.1"
                     /translation="MTVPHIPRGPVMADIAAFRLTGEERQRLLDPAIGGIILFRRNFQ
                     NIEQLKTLTAEIKALRTPELIIAVDHEGGRVQRFIESFTRLPAMSTLGEIWDKDGASA
                     AETAAGQVGRVLATELSACGIDLSFTPVLDLDWGNCPVIGNRSFHHNPEAVAHLALAL
                     QKGLAKGGMKSCGKHFPGHGFVEGDSHLVLPEDRRSLSELEAADLAPFHIMSREGMAA
                     VMPAHVVYPQVDTKPAGFSEIWLKQILRRDIGFKGVIFSDDLTMEGACGAGGIKERAR
                     ISFEAGCDIVLVCNRPDLVDELREDFRIPDNPALAQRWQYMANTLGSAAAQAVMQTAD
                     FQEAQAFVAGLASPQDTAGGVKVGEAF"
     gene            5716..5792
                     /locus_tag="ACJJDE_001828"
     tRNA            5716..5792
                     /locus_tag="ACJJDE_001828"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5750..5752,aa:Pro,seq:cgg)
BASE COUNT         1327 a         1806 c         1489 g         1248 t
ORIGIN      
        1 cgtacaatcc gtcgccgatt tttgcctgtt tgagactgtt tgcaatgatg cccgcctacg
       61 cctacgccgc gctcgccttt tccgccttca cttccgccac cctcctgccc ggcacatccg
      121 aagccgcctt tgccctgttc gtccgccgct ttcccgaaca cgcatacggc gcgttgctgt
      181 gcgccggcct tgccaacgga ttgggcagta tggtttccta ttggatggga cgtttgctgc
      241 cttcccgaaa aatgccgtct gaaaaaacac tgaatctgat gcggcgtttc ggtatttggc
      301 tgcttccgtt tgcctggctg cccgtcgtcg gcgacgcact gccgcttgcc gccggctggc
      361 tgcggttgaa tccgtggaca agcgggctga tgctggttat cggcaaaacg gcgcgttacg
      421 ccttcattct gtggggaatg caatattacg ccgcctgaac cgtgcgttat aatgccgacc
      481 gcacaaaccg actgcacaaa aaaatgaaca gacacatccg ccaagaaatt ttcgaacgct
      541 tccgcgccgc caacccccat ccgaccaccg agctgaattt caactcccct ttcgagcttt
      601 taattgccgt tctgctttcg gcgcaggcga ccgatgtcgg cgtaaacaag gcgacggcga
      661 agctgtttcc ggttgccgat acgccgcagg cgatgctgga tttgggtttg gacggcgtga
      721 tggaatacac gaaaaccatc gggctgtata aaaccaagtc caagcacatc atgcaaacct
      781 gccgcatcct gctggaaaaa tacaacggcg aagtgccgga agaccgcgag gctttggaat
      841 cgttgcctgg cgtggggcgc aaaacggcaa acgtggtatt gaacacagcg ttcggacacc
      901 ccgttatggc ggtcgatacg catattttcc gcgtgtccaa ccgaaccaaa atcgcccccg
      961 ggaaagatgt gcgcgaagtc gaagacaaac tgatgcgctt cattcctaaa gaatttctga
     1021 tggacgcgca ccactggctg attttgcacg gacgctacac ctgcaaggca ctcaaaccgc
     1081 aatgccaaac ctgcatcatc aacgatttgt gcgaatatcc cgccaaagcc tgaccgccgc
     1141 cgcccttcaa aatgaaacgc ttgaaaattc ggacggacgt tgtagaattt caacctatgc
     1201 cgtctgaagc cgacaaaatg cgcttcagac ggcattaaag ccggtaccgg catccgacaa
     1261 aggacaaaac gtgttcaaaa aataccaata cctcgctttg gcagcactgt gtgccgcctc
     1321 gctggcaggc tgcgacaaag ccggcagctt tttcggtgcg gacaaaaaag aagcatcttt
     1381 cgtagaacgc atcgaacaca ccaaagacga cggcagcgtc agtatgctgc tgcccgactt
     1441 tgtccaactg gttcaaagcg aaggcccggc agtcgtcaat attcaggcag cccccgcccc
     1501 gcgcacccaa aacggcagcg gcaatgccga aaccgattcc gacccgcttg ccgacagcga
     1561 cccgttctac gaatttttca aacgcctcgt cccgaatatg cccgaaatcc cccaagaaga
     1621 agcagatgac ggcggattga acttcggttc gggcttcatc atcagcaaag acggctatat
     1681 tctgaccaat acgcacgtcg ttaccggcat gggcagtatc aaagtcctgc tcaacgacaa
     1741 gcgcgaatat accgccaaac tcatcggttc ggatgtccaa tccgatgtcg cccttctgaa
     1801 aatcgacgca acggaagagc tgcccgtcgt caaaatcggc aatcccaaag atttgaaacc
     1861 gggcgaatgg gtcgccgcca tcggcgcgcc cttcggcttc gacaacagcg tgaccgccgg
     1921 catcgtgtcc gccaaaggca gaagcctgcc caacgaaagc tacacaccct tcatccaaac
     1981 cgacgttgcc atcaatccgg gcaactccgg cggcccgctg ttcaacctga aaggacaggt
     2041 cgtcggcatc aactcgcaaa tatacagccg cagcggcgga ttcatgggca tttccttcgc
     2101 catcccgatt gacgttgcca tgaatgtcgc cgaacagctg aaaaacaccg gcaaagtcca
     2161 acgcggacaa ctgggcgtga ttattcaaga agtatcctac ggtttggcac aatcgttcgg
     2221 tttggacaaa gccggcggcg cactgattgc caaaatcctg cccggcagcc ccgcagaacg
     2281 tgccggcctg caggcgggcg acatcgtcct cagcctcgac ggcggagaaa tacgttcttc
     2341 cggcgacctt cccgttatgg tcggcgccat tacgccggga aaagaagtca gcctcggcgt
     2401 atggcgcaaa ggtaaggaaa tcaccgttgc cgtcaaactg ggcaatgctt ccgaacaaac
     2461 cggttcctcg tccgagccgg acaaagcccc ttatgccgaa caccaatccg gtacgttctc
     2521 ggtcgaatcc gcaggcatta cccttcagac acataccgac agcagcggcg gacggcttgt
     2581 cgtcgtgcgg gtttcggggg cggcagaacg cgcaggcttg aggcgcggcg acgaaatcct
     2641 tgccgtcggg caagtccccg tcaatgacga agacggtttc cgcaaagcta tggacaaggc
     2701 aggcaaaaac gtccccctgc tggtcatgcg ccgtggcaac acgctgttca tcgcattaaa
     2761 cctgcaataa cacacataat ttaaccaaaa tattttttaa atgataaaat gcccgtcaat
     2821 accgattaac gggcatttta cagaaatcag ttggttgatt ttaaacaaat attttttacg
     2881 acaaaaaata tttccgccca ttttgccaac aaaacccaaa ccggaggcgg acagatacgc
     2941 tcccatccgg acgcttaaca cccccgtaaa ccatgcagct gatcgactat tcacattcat
     3001 ttttctcggt tgtgccaccc tttttggcac tggcacttgc cgtcattacc cgccgcgtac
     3061 tgctgtcttt aggcatcggt attctggtcg gcgttgcctt tttggtcggc ggcaaccccg
     3121 tcgacggtct gacacacctg aaagacatgg tcgtcggctt ggcttggtca gacggcgatt
     3181 ggtcgctggg caaaccaaaa atcttggttt tcctgatact tttgggtatt tttacttccc
     3241 tgctgaccta ctccggcagc aatcaggcgt ttgccgactg ggcaaaacgg cacattaaaa
     3301 accggcgcgg cgcgaaaatg ctgaccgcct gcctcgtgtt cgtaaccttt atcgacgact
     3361 atttccacag tctcgccgtc ggtgcgattg cccgccccgt taccgacaag tttaaagttt
     3421 cccgcgccaa actcgcctac atcctcgact ccactgccgc gcctatgtgc gtgctgatgc
     3481 ccgtttcaag ctggggcgcg tcgattatcg ccacgcttgc cggactgctc gttacctaca
     3541 aaatcaccga atacacgccg atggggacgt ttgtcgccat gagcctgatg aactattacg
     3601 cactgtttgc cctgattatg gtgttcgtcg tcgcatggtt ctccttcgac atcggctcga
     3661 tggcgcgttt cgaacaagcc gcgttgaacg aagcccacga tgaaactgcc gcttcagacg
     3721 ctaccaaagg tcgtgtttac gcactgatta ttcccgtttt ggccttaatc gcctcaacgg
     3781 tttccgccat gatctacacc ggtgcacagg caagcgaaac cttcagcatt ttgggtgcat
     3841 ttgaaaatac ggacgtgaac acttcgctgg tattcggcgg cacttgcggc gtgcttgccg
     3901 tcgtcctctg cacgctcggc acgattaaaa ccgccgatta tcccaaagcc gtttggcagg
     3961 gtgcgaaatc catgttcggc gcaatcgcca ttttaatcct tgcctggctc atcagtacgg
     4021 ttgtcggcga aatgcacacg ggcgactacc tctccacgct ggttgcgggc aacatccatc
     4081 ccggcttcct gcccgtcatc cttttcctgc tcgccagcgt gatggcgttt gccacaggca
     4141 caagctgggg gacgttcggc atcatgctgc cgattgccgc cgccatggcg gtcaaagtcg
     4201 aacccgcgct gattatcccg tgtatgtccg cagtaatggc gggggcggta tgcggcgacc
     4261 actgctcgcc catttccgac acgaccatcc tgtcgtccac cggcgcgcgc tgcaaccaca
     4321 tcgaccacgt tacctcgcaa ctgccttacg ccttaaccgt tgccgccgcc gccgcatcgg
     4381 gctacctcgc attgggtctg acaaaatccg cgctgttggg ctttggcacg acaggcattg
     4441 tattggcggt gctgattttt ctgttgaaag ataaaaaacg cgccaacgcc tgaccccttt
     4501 ccctgttcag acggcatatg ccgtctgaag ctttttggag caaaccgcaa tgaccgtccc
     4561 ccatattccg cgcggccccg tcatggcaga cattgccgcc ttccgcctga ccggagaaga
     4621 aaggcaacgc ctgctcgacc ccgcaatcgg cggcatcatc ctcttccgcc gcaacttcca
     4681 aaacatcgaa caactcaaaa cactcaccgc cgaaatcaaa gccctgcgca cacccgaact
     4741 cattatcgcc gtcgatcacg aaggcggcag ggtgcaacgt ttcatcgaaa gcttcacccg
     4801 cctgcccgca atgagtacgc tcggcgagat ttgggacaaa gacggcgcgt ccgccgccga
     4861 aaccgccgcc ggacaagtcg gccgggtttt ggcaaccgag ctttccgcct gcggcatcga
     4921 tttgtccttc acgcccgtct tagatttgga ctggggaaac tgccccgtca tcggcaaccg
     4981 cagtttccac cacaatcccg aagcggtcgc ccacctcgcc ctcgcccttc aaaaaggttt
     5041 ggcaaaaggc ggtatgaaat cctgcggcaa acattttccc ggacacggat ttgtcgaagg
     5101 agacagccat ctggtcttgc cggaagacag gcgcagcctg tccgaactcg aagccgccga
     5161 cctcgccccc ttccacatta tgagccgcga aggtatggcg gcggttatgc ccgcccacgt
     5221 cgtttatcca caagtggaca caaagcccgc agggttttcc gaaatctggc tcaaacaaat
     5281 tttgcgccgc gacatcgggt ttaaaggcgt aattttctcg gatgatttga ctatggaggg
     5341 cgcgtgcggg gcaggcggca tcaaagaacg cgcccgcatt tcctttgagg caggttgcga
     5401 catcgtcctc gtctgcaacc gtcccgacct tgtggacgaa ctgcgcgaag atttccgcat
     5461 tcctgacaat cccgctttgg cgcaacgttg gcaatacatg gccaacacgc tcggcagtgc
     5521 cgccgcgcaa gccgttatgc agacggcgga tttccaagag gcgcaagcct ttgttgccgg
     5581 ccttgcctcg ccgcaagaca cggcgggcgg cgtaaaagtc ggcgaagcct tttaaatccg
     5641 cccgacacgc tgcaaaaagg caaaacggta taggcacgcc gtattttttg cgctataatc
     5701 acgccttact taattcggaa tgtagcgcag cccggtagcg cacttcgttc gggacgaagg
     5761 ggtcggaggt tcgaatcctc tcattccgac caaatccaaa ccgcctcggc atccattgcc
     5821 ggagcggttt ttccttttgg cggcaacaga aaaatgccgt ctgaaacaga
//
LOCUS       DBBZXU010000114         5856 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.114, whole genome shotgun sequence.
ACCESSION   DBBZXU010000114 DBBZXU010000000
VERSION     DBBZXU010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5856
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.114"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(106..1023)
                     /gene="thrB"
                     /locus_tag="ACJJDE_001829"
     CDS             complement(106..1023)
                     /gene="thrB"
                     /locus_tag="ACJJDE_001829"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HGG7541704.1"
                     /translation="MSVYTSVSDDEMRGFLDDYDLGEFVSLQGIAQGITNSNYFLTTT
                     SGRYVLTVFEVLKQEELPFFLELNRHLSMKGVAVAAPVARKDGRLDSVLAGKPACLVA
                     CLKGSDTALPTAEQCFHTGAMLAKMHLAAADFPLEMENPRYDAWWTEACARLLPVLSQ
                     DDAALLCSEIDALKDNLGNHLPSGIIHADLFKDNVLLDGGQVSGFIDFYYACRGNFMY
                     DLAIAVNDWARTADNKLDEALKKAFIGGYEGVRPLSAEEKAYFPTAQRAGCIRFWVSR
                     LLDFHFPQAGEMTFIKDPNAFRNLLLSLG"
     gene            complement(1059..1787)
                     /gene="ubiG"
                     /locus_tag="ACJJDE_001830"
     CDS             complement(1059..1787)
                     /gene="ubiG"
                     /locus_tag="ACJJDE_001830"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061542 - 3-demethylubiquinol-n
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HGG7541705.1"
                     /translation="MGGKMSDKKYNVDEGEIAKFSRIADKWWDKSGEFKTLHDINPLR
                     LDYIDGHADLRGKRVLDVGCGGGILAESMARRGAAFVKGIDMAEQSLETARLHAALNN
                     VADIEYECIRVEDLAEAEPHSFDVVTCMEMMEHVPDPAAIVRACAKLVKPDGMVFFST
                     INKNPKSYLHLIVAAEYLLKFVPKGTHDWKKFIAPAELARMCRQAGLDVADTKGMTYH
                     VLSQTYALCDSTDVNYMFACRPAF"
     gene            1939..3180
                     /locus_tag="ACJJDE_001831"
     CDS             1939..3180
                     /locus_tag="ACJJDE_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015173 - aromatic amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015801 - aromatic amino acid transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter"
                     /protein_id="HGG7541706.1"
                     /translation="MPTKTPSLFGGAMIIAGTVIGAGMLANPTATSGVWFTGSLAVLL
                     YTWFSMLSSGLMILEVNTHYPHGASFDTMVKDLLGRSWNIINGIAVAFVLYLLTYAYI
                     FVGGDLTAKGLGSAAGGNVSLTVGQLVFFGILAFCVWASARLVDRFTSVLIGGMVLTF
                     IWATGGLIADAKLPVLFDTQAPTGTNYWIYVATALPVCLASFGFHGNVSSLLKYFKGD
                     APKVAKSIWTGTLIALVIYVLWQTAIQGNLPRNEFAPVIAAEGQVSVLIETLSKFAQT
                     GNMDKILSLFSYMAIATSFLGVTLGLFDYIADIFKWNDSVSGRTKTAALTFLPPLISC
                     LLFPTGFVTAIGYVGLAATVWTGIIPAMLLYRSRKKFGAGKTYKVYGGLWLMVWVFLF
                     GIVNIAAQVLSQMELVPVFKG"
     gene            3313..3876
                     /gene="gmhB"
                     /locus_tag="ACJJDE_001832"
     CDS             3313..3876
                     /gene="gmhB"
                     /locus_tag="ACJJDE_001832"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HGG7541707.1"
                     /translation="MKLIILDRDGVINQDRDDFVKSVDEWIPVEGSMDAVAFLTQAGY
                     TVAVATNQSGIGRKYFTVQNLTEMHAKMHRLVRQAGGEINGIWFCPHTDADNCNCRKP
                     KPGMIEDIIGRFNAQASETWLVGDSLRDLQAIDAVGGKPALVLTGKGKKTLSQHGHEL
                     PEHTQVFDTLLDFSQYIMQENAAPQAD"
     gene            3906..4649
                     /locus_tag="ACJJDE_001833"
     CDS             3906..4649
                     /locus_tag="ACJJDE_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HGG7541708.1"
                     /translation="MLIIRNLIYWLILCSTLIFLFPFMLLASPFRDGAHKMARVWVKI
                     LNLSLKHIVGLKYRIIGAENIPDRPAVICAKHQSGWETLALQDIFPPQVYVAKRELFK
                     IPFFGWGLKLVKTIGIDRNNRREANEQLIKQGLARKNEGYWITIFPEGTRLAPGKRGK
                     YKLGGARMAKMFEMDIVPVALNSGEFWPKNSFLKYPGEITVVICPTIPHASGSEAELM
                     EKCEHLIETQQPLISGAGPFAAKMPSETV"
     gene            4646..5335
                     /locus_tag="ACJJDE_001834"
     CDS             4646..5335
                     /locus_tag="ACJJDE_001834"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HGG7541709.1"
                     /translation="MTSLIHTLSDGMELTIEIKRRAKKNLIIRPIGTHTVRISVPPCF
                     SVSALNRWLYENEAVLRRTLAKTPPQTAENRLPESILFHGRQLALTAHQDTQILLMPS
                     EIRVPEGAPEKQLALLQDFLERQAHSYLIPRLERHARTTQLFPASSSLTSAKTFWGVC
                     RKTTGIRLNRRLVGAPEYVADYVCIHELCHLAHPDHSPAFWELTRRFAPYTPEAKQWL
                     KIHGRELFALG"
     gene            5447..5632
                     /locus_tag="ACJJDE_001835"
     CDS             5447..5632
                     /locus_tag="ACJJDE_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541710.1"
                     /translation="MPEQARARPIQTAMTLCRRFGAGWRHTRRLPRFISHRSSETRNP
                     PGPTCGMKRLSWREVFY"
BASE COUNT         1375 a         1898 c         1384 g         1199 t
ORIGIN      
        1 taaaatggaa aatactcggc tatcgtctca ttttcgtttt aatcagccat aaaaatgccg
       61 tctgaaaccc tttcagacgg catttctgtc aaacgccgga cgcactcaac ccaaactcaa
      121 cagcaggttg cggaacgcgt tcgggtcttt gataaacgtc atctcgcccg cctgcggaaa
      181 atgaaaatcc aacaggcgcg acacccaaaa acggatgcag cctgcacgtt gggcggtcgg
      241 gaaatacgcc ttttcttcgg cactcaaggg gcgcacgccc tcataaccgc cgataaacgc
      301 ctttttcaac gcctcatcca acttattgtc cgccgtcctt gcccaatcgt tgaccgcaat
      361 cgccaagtca tacataaaat tgccccggca ggcataatag aaatcgatga aacccgatac
      421 ctgaccgccg tcaagcaaca cattgtcttt aaacagatcg gcatggatga tgcccgaagg
      481 cagatgattg ccgagattgt ccttcaacgc atcgatttcg gaacacagca gtgcggcatc
      541 gtcttgcgac aggacgggca gcagccgggc gcacgcctcc gtccaccacg catcgtaacg
      601 cgggttttcc atttccaaag ggaaatcagc ggcggcaagg tgcattttgg ccaacatcgc
      661 accggtatgg aagcactgct ccgccgtcgg cagcgcagta tccgaacctt tcaggcaggc
      721 aaccaggcag gcaggcttgc ccgccaaaac ggaatcaagc cggccgtctt tgcgcgcaac
      781 cggcgcggca accgccacgc ccttcatact caaatgccgg ttaagctcca gaaaaaacgg
      841 cagctcttcc tgtttcaaca cttcaaacac ggtcagcaca taacgtcccg aagtcgtcgt
      901 cagaaaataa ttgctgttgg taatcccctg cgcgatgccc tgcagggaaa caaattctcc
      961 caaatcgtaa tcatccaaaa agccgcgcat ttcatcatcg gaaacactgg tataaacaga
     1021 catatccatt cacccgttca aaacaatcaa acccgccgtc agaacgccgg acggcaggca
     1081 aacatataat tcacatcggt cgaatcgcac agggcataag tttgcgacaa cacatggtaa
     1141 gtcataccct tcgtatccgc cacatccaag cctgcctgac ggcacatccg cgccagctcg
     1201 gcaggcgcga tgaatttttt ccagtcgtgc gtacctttgg ggacgaactt caacagatat
     1261 tccgccgcca caatcagatg caggtacgat ttcgggtttt tattgatggt ggaaaaaaac
     1321 accatgccgt ccggtttgac cagcttggca caggcgcgaa cgatggcggc gggatcgggg
     1381 acgtgttcca tcatttccat gcacgttacc acatcgaacg agtgcggttc cgcctcggca
     1441 aggtcttcca cgcggataca ttcgtattcg atatcggcga cattgttcaa agccgcgtgc
     1501 aggcgggcgg tttccagcga ctgctccgcc atgtcgatac cctttacaaa cgccgcgccg
     1561 cgccgcgcca tactttccgc caagatgccg ccgccgcagc ccacatccaa aacccgtttg
     1621 ccgcgcaaat ccgcgtgtcc gtcgatataa tccagccgca gcggattgat gtcgtgcaag
     1681 gttttgaact cgcccgactt gtcccaccat ttgtcggcaa tccggctgaa tttggcgatt
     1741 tccccctcat cgacattata ttttttgtcg gacattttcc ctcccatctg acgaaccgcc
     1801 cactccaaaa cccaagatta tactatggaa cgcaatgccg tctgaaagcc ttttcgggcg
     1861 gcgcggcgca aataccttac aaatccttac actttacggc ataatggcgg ctcgcttttt
     1921 ctggcagaaa gacaaaatat gcccaccaaa accccttcac tgttcggcgg cgcgatgatt
     1981 atcgccggca cggtcatcgg cgcaggtatg ctcgccaacc cgaccgccac atccggcgta
     2041 tggtttaccg gctcgctggc cgtgttgctg tacacctggt tttccatgct ctccagcggc
     2101 ctgatgattt tggaagtcaa cacccactac ccccacggcg cgagcttcga caccatggtt
     2161 aaagacctgc tcggacggag ctggaacatc atcaacggca tcgccgtcgc cttcgtttta
     2221 tacctgctta cttacgctta tatcttcgtc ggcggcgacc tgaccgccaa aggcttaggc
     2281 agcgcggcag gcggcaatgt ttcactcacc gtcggacaac tcgtcttctt cggcattctc
     2341 gccttttgcg tatgggcatc cgcacgcttg gtcgaccgat tcaccagcgt cctcatcggc
     2401 ggcatggtat taacctttat ttgggcaacc ggcggcctga ttgccgatgc caaactgccc
     2461 gtcctcttcg acacccaagc ccctaccggc accaactact ggatttatgt cgccaccgcc
     2521 ctgcccgtct gccttgcgtc attcggtttc cacggcaacg tctccagcct gctcaaatac
     2581 tttaaaggcg acgcgcccaa agtggctaaa tccatctgga cgggcacact gattgcgctg
     2641 gtaatttacg tcctctggca aaccgccatc caaggcaacc tgccgcgcaa cgagttcgcc
     2701 cccgtgattg ccgccgaagg gcaagtctcc gtcctgattg aaaccctgtc caaattcgcc
     2761 caaaccggca atatggacaa aatattgtcc ctgttttcct atatggcgat cgccacctcg
     2821 tttttaggcg taacgctcgg actcttcgac tacatcgccg acatcttcaa atggaacgac
     2881 agcgtgtccg gccgcaccaa aaccgccgcg ctgaccttcc tgccgcctct aatttcctgc
     2941 ctgctcttcc ccaccggctt tgttaccgcc atcggctacg tcggcctggc ggcaaccgtc
     3001 tggacaggca tcatccccgc catgctgctc taccgttcgc gcaaaaaatt cggcgcaggc
     3061 aaaacctata aagtttacgg cggcttgtgg ctgatggttt gggtcttcct tttcggcatc
     3121 gtcaacatcg ccgcacaggt attgagccaa atggaactcg tccccgtatt taaaggataa
     3181 aggcaaaatg ccgtctgaag cccgccggcg gcttcagacg gcattgcctc gttatcacgc
     3241 ggcacaggcg catcactgcc gatatttcag tataatgcca cccccgacct gccccaatcc
     3301 aaaggaaacg cgatgaaact catcattctc gaccgcgacg gcgtcatcaa tcaggaccgc
     3361 gatgacttcg tcaaatccgt tgacgagtgg atacctgtcg aaggcagcat ggatgcggtg
     3421 gcatttctga cgcaggcagg ctacaccgtc gccgttgcca ccaaccaatc cggcatcggg
     3481 cgcaaatatt ttaccgttca aaaccttacc gaaatgcacg ccaaaatgca ccgcctcgtc
     3541 cgtcaggcag gcggcgaaat caacggcatc tggttctgcc cgcacaccga tgccgacaac
     3601 tgcaactgcc gcaagcccaa accgggtatg attgaagaca tcatcggacg cttcaacgcc
     3661 caagcctcgg aaacctggct ggtcggcgac agcctgcgcg atttgcaggc aatcgatgcc
     3721 gtcggcggaa aacccgcgct ggttctgacc ggaaaaggca aaaaaacgct ctcccaacac
     3781 ggacacgaat tacccgaaca cacacaggtt ttcgatacct tgctcgattt ctcacaatac
     3841 atcatgcagg aaaacgccgc accgcaagcc gactgaacat accgcatttc cgacaaggca
     3901 aaaccatgct catcatccgc aacctgattt actggctgat actctgttcc accctgattt
     3961 tcctctttcc ctttatgctg ctcgcctcgc ctttccggga cggggcgcac aagatggcgc
     4021 gggtctgggt caaaatcctc aacctctcgc tcaaacacat cgtcgggctc aaataccgca
     4081 tcatcggcgc ggaaaacatc cccgaccgcc ccgccgtcat ctgcgccaaa caccaaagcg
     4141 gctgggaaac gcttgccctt caggacattt ttccgccgca ggtttacgtt gccaaacgcg
     4201 agctgttcaa aatccccttt ttcggctggg gtttaaaact ggtcaaaacc ataggcatag
     4261 accgcaacaa ccgccgcgaa gccaacgaac agctcataaa acaggggttg gcgcgcaaaa
     4321 acgaaggcta ttggattacc attttccccg aaggcacgcg ccttgcgccc ggaaaacgcg
     4381 gcaaatacaa actcggcggc gcgcgcatgg cgaaaatgtt tgagatggac atcgtccccg
     4441 tcgccctcaa cagcggcgaa ttttggccga aaaactcctt tctgaaatat ccgggggaaa
     4501 tcaccgtcgt catctgtccg accatcccgc acgcaagcgg cagcgaagcc gaattgatgg
     4561 aaaaatgcga acacctcatc gaaacgcagc agccgctcat ttccggcgca ggcccgtttg
     4621 ccgccaaaat gccgtctgaa accgtatgac ctccctgatc cacactcttt ctgacggcat
     4681 ggaactgact atagaaatca agcgccgtgc caagaaaaac ctgattatcc gccctatcgg
     4741 cacacatacc gtccgcatca gcgtcccacc ctgcttctcc gtctccgctc taaaccgctg
     4801 gctgtatgaa aacgaagccg tcctgcggcg aacactggcg aaaacaccgc cgcaaactgc
     4861 cgaaaaccgg ctgcccgaat ccatcctctt ccacggcaga caacttgccc tcaccgccca
     4921 tcaagacacg caaatcctgc tgatgccgtc tgaaatccgc gttcccgaag gcgcacccga
     4981 aaaacagctt gcgctgctgc aggacttttt ggaacggcag gcgcacagtt acctgattcc
     5041 ccgcctcgaa cgccacgccc gcaccacaca actgttcccc gcctcctcct cgctgacctc
     5101 tgccaaaacc ttctggggcg tgtgccgcaa aaccacaggc atacgcctca accggcggct
     5161 ggtcggcgca ccggaatacg ttgccgatta tgtctgcata cacgaactct gccacctcgc
     5221 ccatcccgac cacagccccg ccttttggga actgacccgc cgcttcgccc cctacacgcc
     5281 cgaagcgaaa cagtggctca aaatccacgg cagggaactt ttcgccttag gctgacgcgg
     5341 tcccgggccg gcatccgcca attcagacct cctcccaaac ggacatccgg aaagcagcat
     5401 cacagccggc gacacatacc gctgccgccg ctttcagacg gcatccgtgc cggaacaggc
     5461 acgcgcccgc ccgattcaaa ccgcgatgac gctttgccgc cggttcgggg caggatggcg
     5521 gcacacgcgc cgtctgccgc gtttcatttc acaccgctct tccgaaaccc gaaacccgcc
     5581 cggtccgacg tgcggtatga aacgcttaag ctggcgcgaa gtcttttact gatttgcccg
     5641 cgaaaatgcc gtctgaaagg ttttcggacg gcattttttt gcgtttccca ggatggcggc
     5701 ggattcgtaa aaggcggtca gggtggattg taggatgggt tgagacctgc cgaatccgcc
     5761 gcatctgcca aatctaccgc cgtcattcct acgaaagtgg gaatctagaa cgcggggtta
     5821 agaaaacctg catcccgtca ttcccacgaa agtggg
//
LOCUS       DBBZXU010000115         5692 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.115, whole genome shotgun sequence.
ACCESSION   DBBZXU010000115 DBBZXU010000000
VERSION     DBBZXU010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.115"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            99..815
                     /locus_tag="ACJJDE_001836"
     CDS             99..815
                     /locus_tag="ACJJDE_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HGG7541711.1"
                     /translation="MNFENDDIIHAPTTSSLILEERHDSELFRVYALILDGITDQVLL
                     PGKKLTESELCRQMVCSRNTVRGALSLLAHDKIVDLQPNRGAFVHVPDLKEMQDVFNA
                     RIEMETMILNILADLPDLETRLKPLYAMIRREEEASGRGDRVGWNRLSNAFHVELARL
                     VGNDVLFDIMNTLCARSSLIVAVAGVHREEKHAINTHTHSEHREILDLLLAGRRNRVV
                     KILRRHLGNCMERLEKTLED"
     gene            964..1866
                     /locus_tag="ACJJDE_001837"
     CDS             964..1866
                     /locus_tag="ACJJDE_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine exporter LysO family protein"
                     /protein_id="HGG7541712.1"
                     /translation="MDSLMTLLSVLIPMFAGFFIRVPKPYLPALDKVLSVLVYAVLLL
                     IGVSLSRVEDLGSRLDDMALTVLWLFVCTVGANLLALAVLGKLFPWRIKGKGKGVSVG
                     VSGSVGQLGCVLLGFAFGKLMRDIWMPSESAGMYCLMLLVFLIGVQLKSSGVSLRQVL
                     VNRRGIRLSVWFMLSSLSGGLLFAASTDGVSWTKGLAMASGFGWYSLSGLVMTEAYGA
                     VWGSIMLLNDLARELFALAFIPLLMKRFPDAAVGVGGATSMDFTLPVIQGAGGLEVVP
                     VAVSFGVVVNIAAPFLMVVFSALG"
     gene            1909..2682
                     /locus_tag="ACJJDE_001838"
     CDS             1909..2682
                     /locus_tag="ACJJDE_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family DNA-binding transcription
                     regulator"
                     /protein_id="HGG7541713.1"
                     /translation="MKPKIQRHGEILSLVRRHQFMSVDELAAALDVTPQTIRRDIREL
                     EEGGSLKRHHGGASSGGNLPEGLPADRQTRCQNEKNAIARLIAEHIPDGSSLFVSIGT
                     TMEAVASELVRRRGSLRIITNNIHVASIVSARTDYTVIITSGVVRPLDGGITGVATVD
                     FINQFKVDYAVMSTHGVESDGSLLDDDYKEVSVMQAMIANARVRFLGVDHSKFRSNAL
                     VRLGDITAFDKVFTDRLPDTAMQKMLKEAGVECLIADAV"
     gene            2794..4482
                     /locus_tag="ACJJDE_001839"
     CDS             2794..4482
                     /locus_tag="ACJJDE_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HGG7541714.1"
                     /translation="MLNKDQFADNHFIRTFIEEDLKSGKHEAVQTRFPPEPNGYLHIG
                     HAKSICLNFGLAYIYDGLCNLRFDDTNPEKENDEYVNAIKEDVEWLGFHWAGEPRFAS
                     NYFDQLYDYAVGLIKDGKAYVDDLTPEEMREYRGTLTEAGKNSPYRDRSVEENLDLFT
                     RMKNGEFPDGSKTLRLKIDMASGNINMRDPVIYRIRRAHHHNTGDKWCIYPMYDYTHC
                     ISDAIEGITHSLCTLEFEAHRPLYDWVLDNIPAPHATRPRQYEFSRLELLYTITSKRK
                     LNQLVVEKHVSGWDDPRMPTISGMRRRGYTPEGLRLFAKRAGISKSENIVDMSVLEGA
                     IREELENSAPRLMAVLNPLKVTLTNFETGRTQSRRAAFHPNHEEMGEREVPISQTIYI
                     EADDFAENPPKGFKRLIPGGEVRLRHGYVIKCDEVVKDEAGNVVELKCSIDHDTLGKN
                     PEGRKVKGVIHWVSAEHAAEIKVRLYDRLFTVERPDAVRGEDGEYLPFTDFLNPESVK
                     EITAYAEPAAKDLPAESRWQFERIGYFVTDRKDHGKDTPVFNRTVTLKDSWQPK"
     gene            4575..5531
                     /gene="gshB"
                     /locus_tag="ACJJDE_001840"
     CDS             4575..5531
                     /gene="gshB"
                     /locus_tag="ACJJDE_001840"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002259400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HGG7541715.1"
                     /translation="MKVLFIADPMASFKTYKDTTYAMMREMAKRGWRLFHTLSGELSV
                     KNGLVVADASAFEFLGAQDDHDKNWFAAADKVQTALKAFDAVIMRTDPPFDMQYLYAT
                     QLLTLAEQQGAKVFNSGQAMRDFNEKLAILNFSRFTAPTLVTTRSADVRAFLKEHGDI
                     IIKPLDGMGGMGIFRLTEKDPNIGSILETLMQLDSRTIMAQRYIPEIVHGDKRILIIG
                     GEVVPYALARIPQNGETRGNLAAGGRGVAQELGGRDREIAETLAPELKRRGILLAGLD
                     VIGSNLTEVNVTSPTGFQEIMKQKGFDVAAMFADAVAAWSVR"
BASE COUNT         1323 a         1550 c         1578 g         1241 t
ORIGIN      
        1 aaatttgtgc aatgctttaa ttcctctgac acgatttgaa gcacagccgc cttaaaacat
       61 cttaaaaaat ttgaaagcgt aaaaatacgg aaaacatcat gaactttgaa aacgacgaca
      121 ttatccatgc gccgaccacg tcttccctga ttctcgaaga gcggcacgat tcggagctgt
      181 tccgtgttta cgccctgatt ttggacggca ttaccgatca ggtgctgctg cccggcaaaa
      241 agctgaccga atccgaactt tgccgtcaga tggtgtgttc gcgcaacacc gtccgcggcg
      301 cgctgtcgct tttggcgcac gacaagattg tcgatttgca acccaacagg ggcgcgttcg
      361 tccacgttcc cgatttgaaa gaaatgcagg atgtgttcaa tgcgcgcatc gaaatggaga
      421 cgatgatttt gaatatcctc gcagatttgc cggatttgga aacgcgcctc aagccgcttt
      481 atgcgatgat acggcgcgaa gaagaggcct ccggcagggg cgaccgcgtt ggctggaacc
      541 gcctgtccaa tgccttccac gtcgaactgg cgcgcctggt gggcaacgat gtgctgttcg
      601 acattatgaa cacgctgtgc gcgcggtctt ccctgattgt cgccgtggcg ggcgtgcatc
      661 gcgaggaaaa acacgccatc aatacgcata cgcattcaga acaccgcgaa atcctcgacc
      721 tgctgctggc gggcaggcgc aaccgcgtgg tcaaaatcct gcgccgccat ttgggcaact
      781 gtatggagcg tttggaaaag actttggaag attgaatgcc ggagcggata agccgcctga
      841 accttcaggc ggttttttaa tggcgaacct gatgccgtct gaaatatgga tgcgggtatc
      901 tgcaattttc agacggcaat ttttaaaccg cacatatcat gcggcaataa aggagagcag
      961 tagatggaca gcctgatgac attgctttcg gtattgatac cgatgtttgc cggatttttt
     1021 atccgtgtgc ccaagcctta cctgcccgct ttggataagg tgctatcggt cttggtgtat
     1081 gctgtgctgc tgctgatcgg cgtctcgttg tcgcgcgtgg aggatttggg ttcgcggttg
     1141 gacgatatgg cgttgacggt tctgtggctg tttgtttgta cggtcggggc gaacctgctt
     1201 gctttggcag tgttgggaaa gttattcccg tggcggataa aggggaaagg gaagggcgtt
     1261 tcggtcggcg tgtcgggcag tgtggggcag ctcggatgcg tgctgctcgg atttgcattc
     1321 ggcaaactga tgcgcgatat ttggatgccg tctgaaagcg cgggcatgta ttgtctgatg
     1381 ctgctggtgt tcctcatcgg cgtacagctc aaaagcagcg gcgtatcgtt gcggcaggtt
     1441 ttggtcaacc gcaggggtat tcggttgtcg gtctggttta tgctttcatc tctttcgggc
     1501 gggctgctgt ttgccgcatc gacagacggt gtgtcgtgga cgaaaggttt ggcgatggct
     1561 tccggcttcg gttggtattc cctctcgggt ttggtcatga ccgaggctta cggcgcggta
     1621 tggggcagca tcatgctgct gaacgatttg gcacgagagc tgtttgcact ggcatttatc
     1681 ccgctgctga tgaagcgttt tccggatgcg gcggtggggg ttggtggtgc gaccagtatg
     1741 gatttcacat tgcccgtgat tcagggtgcg ggcggtttgg aagtcgtgcc ggtagcggtc
     1801 agcttcggcg tggtggtcaa tatcgccgcc ccatttctga tggtggtgtt ttccgctttg
     1861 ggttgaacgc ggtaaaatcg gcatcccgat gcaaggaggc agaaaacgat gaaaccgaaa
     1921 atccaaaggc acggagagat tttaagcctt gtccgccggc atcagtttat gtcggtggac
     1981 gagcttgccg ccgcattgga cgttaccccg cagacgatac gccgcgacat ccgcgagttg
     2041 gaggagggcg gcagcctgaa acgccatcac ggcggcgcat cttcgggcgg aaacttgccg
     2101 gagggcctgc ccgccgaccg ccaaacccgg tgtcaaaacg aaaaaaacgc cattgcccgg
     2161 ctgattgcgg aacacatccc cgacggttcg tcgctgtttg tcagtatcgg cacgacgatg
     2221 gaagccgtgg catcggagct ggtcaggcgg cgcggcagcc tgcggattat taccaacaat
     2281 atccacgtcg cctccatcgt ttcggcgcgg acggattaca cggtcattat cacttccgga
     2341 gtcgtccgcc ctttggacgg cggtattacc ggcgtggcaa ccgtcgattt tatcaaccag
     2401 ttcaaagtcg attatgccgt gatgagtacg cacggcgtgg aaagcgacgg ttcgcttttg
     2461 gacgacgact acaaagaagt cagcgtgatg caggcgatga ttgccaatgc gcgcgtccgc
     2521 ttcctcggcg tggaccacag taaattccgc agcaacgcgc tggtcaggct cggcgacatt
     2581 acggcgtttg acaaagtatt taccgaccgg ctgcccgata ccgcgatgca gaagatgctg
     2641 aaagaggcgg gggtggaatg cctgattgcc gatgccgtct gaacgctatg tcaaagcgcg
     2701 caagtcgggt acaataaaca catcatcaaa ccgcttcaga cggcataagg aaccgcccca
     2761 atgccgtctg aagccatctg ttcaaagaaa actatgctca ataaagacca atttgcggac
     2821 aaccatttta tccgcacctt catcgaagaa gacctcaaaa gcggcaaaca cgaagccgtc
     2881 caaacccgtt tcccgcccga acccaacggc tacctgcaca tcggacacgc caaatccatc
     2941 tgcctgaact tcggtttggc gtatatttac gacggcttgt gcaacctgcg ttttgacgat
     3001 accaaccccg aaaaagaaaa cgacgaatac gtcaacgcca tcaaagaaga tgtcgagtgg
     3061 ctcggtttcc attgggcggg cgagccgcgt ttcgcttcca actatttcga ccagctttat
     3121 gactacgccg tcggtttgat taaagacggc aaagcgtatg tcgatgattt gacgcccgaa
     3181 gaaatgcgcg aataccgcgg tacgctgacc gaagcgggta aaaacagccc ttaccgcgac
     3241 cgcagcgtcg aagaaaacct cgacctgttc acacgcatga aaaacggcga gttccccgac
     3301 ggcagcaaaa ccctgcgcct gaaaatcgac atggcatcgg gcaacatcaa tatgcgcgac
     3361 cccgtcatct accgcatccg ccgcgcccat caccacaaca ccggcgacaa atggtgtatc
     3421 tacccgatgt acgactacac gcattgcatt tccgatgcca tcgaaggcat cacgcattcc
     3481 ttgtgtacgc ttgagtttga agcgcaccgt ccgctgtacg actgggtgtt ggacaacatc
     3541 cccgcgccgc acgccacacg tccgcgccaa tacgagtttt cacgcttgga gcttttgtac
     3601 accattacct ccaaacggaa attgaatcag ttggttgtgg aaaaacacgt ttccggctgg
     3661 gacgatccgc gtatgccgac catttccggt atgcgccgac gcggctacac gcccgaaggg
     3721 ctgcgcctgt ttgccaaacg cgccggtatt tccaaatctg aaaacatcgt cgatatgagc
     3781 gtgttggaag gcgcgattcg cgaagagttg gaaaattccg ccccacgcct gatggcggtg
     3841 ttgaacccgc tcaaagtgac cctgaccaac tttgaaaccg gcagaaccca aagccgccgt
     3901 gccgcgttcc atccgaacca cgaggaaatg ggcgagcgcg aagtacctat ttcacaaacc
     3961 atctatattg aagccgacga ctttgccgaa aatccgccca aaggcttcaa acgcctgatt
     4021 cccggcggcg aagtacgctt gcgccacggc tatgtcatca agtgcgatga agtcgtcaaa
     4081 gacgaagcag gcaatgtggt tgaactcaaa tgcagcatcg accacgacac cttgggcaaa
     4141 aatccagaag gccgtaaagt taaaggcgtg attcattggg tttccgccga acacgccgcc
     4201 gaaatcaaag tccgtctgta cgaccgcctc tttaccgtcg agcgtcccga tgccgtgcgc
     4261 ggcgaagacg gcgaatacct gccgttcacc gatttcctca atccggaatc cgtcaaggaa
     4321 atcaccgcct acgccgaacc tgccgccaaa gatttgccgg cagaaagccg ttggcagttc
     4381 gagcgtatcg gctacttcgt aaccgaccgt aaagaccacg gcaaagacac gccggtgttt
     4441 aaccgcacgg tcacgctgaa agattcttgg cagcctaagt aaaaccccat ccttgccgtc
     4501 tgaatattgt tcggacggca tttccccttt gcccgcgaaa tgcggcacat tcggcacacc
     4561 ggaaaggaaa tatgatgaaa gtcctcttta tcgccgaccc gatggcaagt ttcaaaacct
     4621 acaaagacac cacctacgcc atgatgcgcg agatggcaaa acgcggttgg cggctgtttc
     4681 ataccttgag cggggaattg tcggttaaaa acggtctggt ggttgctgat gcgtctgctt
     4741 ttgagtttct cggcgcacaa gacgaccacg acaaaaactg gtttgccgcc gccgacaaag
     4801 ttcagacggc attgaaagca tttgatgccg tgattatgcg taccgatccg ccgttcgata
     4861 tgcaatacct ctacgccacc caattactga cgctggcgga gcagcagggc gcgaaggtct
     4921 ttaacagcgg acaggcgatg cgtgatttca atgaaaaact ggcgattttg aacttcagcc
     4981 gctttaccgc gcccacgctg gtaacgaccc gttccgccga tgtccgcgca tttttgaaag
     5041 aacacggcga catcatcatt aaaccgctcg acggcatggg cggtatgggc atcttccgcc
     5101 tgaccgaaaa agaccccaac atcggcagca tcctcgaaac cctgatgcag cttgattccc
     5161 gcaccattat ggcgcaacgc tacattcccg aaatcgtaca cggtgacaaa cgcatcctga
     5221 ttatcggcgg cgaagtcgtc ccctatgctt tggcgcgtat cccgcaaaac ggcgaaacac
     5281 gcggcaacct tgcggcaggc gggcgcggcg tggcgcagga attgggcgga cgcgaccgcg
     5341 aaattgccga aacgctcgcc cccgaactca aacggcgcgg catcctgctg gccggtttgg
     5401 acgttatcgg cagcaacctg accgaagtca acgtaaccag cccgaccgga ttccaagaaa
     5461 ttatgaaaca aaaaggtttc gacgtggcgg caatgtttgc cgatgccgtt gccgcgtggt
     5521 cggtacgtta aaccgatgcc gtttgaaagg cttttgcttc acaaccgttt ggtttgatcg
     5581 ggcaggcagg gttttccctc agccggcaga gatacgctta atgccgtacg gacacaccgc
     5641 cgccccgttt tcagacggta tatatagtgg attaacaaaa atcaggacaa gg
//
LOCUS       DBBZXU010000116         5570 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.116, whole genome shotgun sequence.
ACCESSION   DBBZXU010000116 DBBZXU010000000
VERSION     DBBZXU010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5570)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5570)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5570
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.116"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1647
                     /gene="hrpB"
                     /locus_tag="ACJJDE_001841"
     CDS             <1..1647
                     /gene="hrpB"
                     /locus_tag="ACJJDE_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion system transporter HrpB"
                     /protein_id="HGG7541716.1"
                     /translation="SMQRQQHIDAELLTDANVRFEQPLEKNNYVLSEDETPCTRVNYI
                     SLDDKTARKFSFLPSVLMKETAFKTGMCLGSNNLSRLQKAAQQILIVRGYLTSQAIIQ
                     PQNMDSGILKLRVSAGEIGDIRYEEKRDGKSAEGSISAFNNKFPLYRNKILNLRDVEQ
                     GLENLRRLSSVKTDIQIIPSEEEGKSDLQIKWQQNKPIRFSIGIDDAGGKTTGKYQGN
                     VALSFDNPLGLSDLFYVSYGRGLAHKTDLTDATGTETASGSRSYSVHYSVPVKKWLFS
                     FNHNGHRYHEATEGYSVNYDYNGKQYQSSLAAERMLWRNRLHKTSVGMKLWTRQTYKY
                     IDDAEIEVQRRRSAGWEAELRHRAYLNRWQLDGKLSYKRGTGMRQSMPAPEENGGGTI
                     PGTSRMKIITAGLDAAAPFMLGKQQFFYATAIQAQWNKTPLVAQDKLSIGSRYTVRGF
                     DGEQSLFGERGFYWQNTLTWYFHPNHQFYLGADYGRVSGESAQYVSGKQLMGAVVGFR
                     GGHKVGGMFAYDLFAGKPLHKPKGFQTTNTVYGFNLNYSF"
     gene            1756..>5570
                     /gene="hrpA"
                     /locus_tag="ACJJDE_001842"
     CDS             1756..>5570
                     /gene="hrpA"
                     /locus_tag="ACJJDE_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-partner secretion exoprotein HrpA"
                     /protein_id="HGG7541717.1"
                     /translation="MNKGLHRIIFSKKHSTMVAVAETANSQGKGKQAGSSVSVSLKTS
                     GDLCGKLKTTLKTLVCSLVSLSMVLPAHAQITTDKSAPKNQQVVILKTNTGAPLVNIQ
                     TPNGRGLSHNRYTQFDVDNKGAVLNNDRNNNPFVVKGSAQLILNEVRGTASKLNGIVT
                     VGGQKADVIIANPNGITVNGGGFKNVGRGILTTGAPQIGKDGALTGFDVRQGTLTVGA
                     AGWNDKGEADYTGVLARAVALQGKLQGKNLAVSTGPQKVDYASGEISAGTAAGTKPTI
                     ALDTAALGGMYADSITLIANEKGVGVKNAGTLEAAKQLIVTSSGRIENSGRIATTADG
                     TEASPTYLSIETTEKGAAGTFISNDGRIESKGLLVIDTGEDIGLRNGAVVQNNGNRPA
                     ATVLNAGRNLVIESKANVNNAKGSTNLSTGGRTVIKEASIQTGTTVYSSSKGNAELGN
                     NTRITGADVTVLSNGTISSSAVIDAKDTAHIEAGKPLSLEASTVTSDIRLNGGSIKGG
                     KQLALLADDNITAKTTNLNTPGNLYVHTGKDLNLNVDKDLSAASIHLKSDNAAHITGT
                     SKTLTASKDMGVEAGSLNVTNTNLRTNSGNLHIQAAKGNIQLRNTKLNAAKALETTAL
                     QGNIVSDGLHAVSADGHVSLLANGNADFTGHNTLTAKADVNAGSVGKGRLKADNTNIT
                     SSSGDITLVAGNGIQLGDGKQRNSINGKHISIKNNGGNADLKNLNVHAKSGALNIHSD
                     RALSIENTKLESTHNTHLNAQHERVTLNQVDAYAHRHLSITGSQIWQNDKLPSANKLV
                     ANGVLALNARYSQIADNTTLRAGAINLTAGTALVKRGNINWSTVSTKTLEDNAELKPL
                     AGRLNIEAGSGTLTIEPANRISAHTDLSIKTGGKLLLSVKGGNAGAPSAQVSSLEAKG
                     NIRLVTGETDLRGSKITAGKNLVVATTKGKLNIEAVNNSFSNYFPTQKAAELNQKSKE
                     LEQQIAQLKKSSPKSKLIPTLQEERDRLAFYIQAINKEVKGKKPKGKEYLQAKLSAQN
                     IDLISAQGIEISGSDITASKKLNLHAAGVLPKAADSEAAAILIDGITDQYEIGKPTYK
                     SHYDKAALNKPSRLTGRTGVSIHAAAALDDARIIIGASEIKAPSGSIDIKAHSDIVLE
                     AGQNDAYTFLKTKGKSGKIIRKTKFTSTRDHLIMPAPVELTANGITLQAGGNIEANTT
                     RFNAPAGKVTLVAGEELQLLAEEGIHKHELDVQKSRRFIGIKVGKSNYSKNELNETKL
                     PVRVVAQTAA"
BASE COUNT         1660 a         1382 c         1299 g         1229 t
ORIGIN      
        1 tccatgcagc gtcagcagca catagatgct gaattgttaa ctgatgcaaa tgtccgtttc
       61 gagcaaccat tggagaagaa caattatgtc ctgagtgaag atgaaacacc gtgtactcgg
      121 gtaaattaca ttagtttaga tgataagacg gcgcgcaaat tttcttttct tccttctgtg
      181 ctcatgaaag aaacagcttt taaaactggg atgtgtttag gttccaataa tttgagcagg
      241 ctacaaaaag ccgcgcaaca gatactgatt gtgcgtggct acctcacttc ccaagctatt
      301 atccaaccac agaatatgga ttcgggaatt ctgaaattac gggtatcagc aggcgaaata
      361 ggggatatcc gctatgaaga aaaacgggat gggaagtctg ccgaaggcag tattagtgca
      421 ttcaataaca aatttccctt atataggaac aaaattctca atcttcgcga tgtagagcag
      481 ggcttggaaa acctgcgtcg tttgtcgagt gttaaaacag atattcagat tataccgtcc
      541 gaagaagaag gcaaaagcga tttacagatc aaatggcagc agaataaacc catacggttc
      601 agtatcggta tagatgatgc gggcggcaaa acgaccggca aatatcaagg aaatgtcgct
      661 ttatcgttcg ataacccttt gggcttaagc gatttgtttt atgtttcata tggacgcggt
      721 ttggcgcaca aaacggactt gactgatgcc accggtacgg aaactgcaag cggatccaga
      781 agttacagcg tgcattattc ggtgcccgta aaaaaatggc tgttttcttt taatcacaat
      841 ggacatcgtt accacgaagc aaccgaaggc tattccgtca attacgatta caacggcaaa
      901 caatatcaga gcagcttggc cgccgagcgc atgctttggc gtaacagact tcataaaact
      961 tcagtcggaa tgaaattatg gacacgccaa acctataaat acatcgacga tgccgaaatc
     1021 gaagtgcaac gccgccgctc tgcaggctgg gaagccgaat tgcgccaccg tgcttacctc
     1081 aaccgttggc agcttgacgg caagttgtct tacaaacgcg ggaccggtat gcgccaaagt
     1141 atgcccgcac ctgaagaaaa cggcggcggt actattccag gcacatcccg tatgaaaatc
     1201 ataaccgccg gattggatgc agcggccccg tttatgttgg gcaaacagca gtttttctac
     1261 gcaaccgcca ttcaagctca atggaacaaa acgccgttgg ttgcccaaga taaattgtca
     1321 atcggcagcc gctacaccgt tcgcggattt gatggggagc agagtctttt cggagagcga
     1381 ggtttctact ggcagaatac tttaacttgg tattttcatc cgaaccatca gttctatctc
     1441 ggtgcggact atggccgcgt atctggcgaa agtgcacaat atgtatcggg caagcagctg
     1501 atgggtgcag tggtcggctt cagaggaggg cataaagtag gcggtatgtt tgcttatgat
     1561 ctgtttgccg gcaagccgct tcataaaccc aaaggctttc agacgaccaa caccgtttac
     1621 ggcttcaact tgaattacag tttctaacct ctgaattttt tactgatatt tagacggtct
     1681 ttccttatcc tcagaccgtc aaactttacc tacgtacttg gcgcgcagta cgttcatctt
     1741 caaaatggaa tagacatgaa taaaggttta catcgcatta tctttagtaa aaagcacagc
     1801 accatggttg cagtagccga aactgccaac agccagggca aaggtaaaca ggcaggcagt
     1861 tcggtttctg tttcactgaa aacttcaggc gacctttgcg gcaaactcaa aaccaccctt
     1921 aaaactttgg tctgctcttt ggtttccctg agtatggtat tgcctgccca tgcccaaatt
     1981 accaccgaca aatcagcacc taaaaaccag caggtcgtta tccttaaaac caacactggt
     2041 gcccccttgg tgaatatcca aactccgaat ggacgcggat tgagccacaa ccgctatacg
     2101 cagtttgatg ttgacaacaa aggggcagtg ttaaacaacg accgtaacaa taatccgttt
     2161 gtggtcaaag gcagtgcgca attgattttg aacgaggtac gcggtacggc tagcaaactc
     2221 aacggcatcg ttaccgtagg cggtcaaaag gccgacgtga ttattgccaa ccccaacggc
     2281 attaccgtta atggcggcgg ctttaaaaat gtcggtcggg gcatcttaac taccggtgcg
     2341 ccccaaatcg gcaaagacgg tgcactgaca ggatttgatg tgcgtcaagg cacattgacc
     2401 gtaggagcag caggttggaa tgataaaggc gaagccgact acaccggggt acttgctcgt
     2461 gcagttgctt tgcaggggaa attacagggt aaaaacctgg cggtttctac cggtcctcag
     2521 aaagtagatt acgccagcgg cgaaatcagt gcaggtacgg cagcgggtac gaaaccgact
     2581 attgcccttg atactgccgc actgggcggt atgtacgccg acagcatcac actgattgcc
     2641 aatgaaaaag gcgtaggcgt caaaaatgcc ggcacactcg aagcggccaa gcaattgatt
     2701 gtgacttcgt caggccgcat tgaaaacagc ggccgcatcg ccaccactgc cgacggcacc
     2761 gaagcttcac cgacttatct ctccatcgaa accaccgaaa aaggagcggc aggcacattt
     2821 atctccaatg atggtcggat cgagagcaaa ggcttattgg ttattgatac cggggaggac
     2881 atcggtttgc gtaacggagc ggtcgttcaa aacaacggca accgccctgc tgctacggta
     2941 ttaaatgccg gccgtaattt ggttatcgaa agcaaagcaa atgtgaacaa tgctaaaggt
     3001 tcgaccaatc tgtcgaccgg cggccgtacc gtcatcaagg aggccagtat tcagactggc
     3061 actaccgtat acagttccag caaaggcaac gccgaattag gcaataacac acgcattacc
     3121 ggggcagatg ttaccgtatt atccaacggc accatcagca gttccgccgt aatagatgcc
     3181 aaagacaccg cacacatcga agcaggcaaa ccgctttctt tggaagcttc aacagttacc
     3241 tccgatatcc gcttaaacgg aggcagtatc aagggcggca agcagcttgc tttactggca
     3301 gacgataaca ttactgccaa aactaccaat ctgaatactc ccggcaatct gtatgttcat
     3361 acaggtaaag atctgaattt gaatgttgat aaagatttgt ctgccgccag catccatttg
     3421 aaatcggata acgctgccca tattaccggc accagtaaaa ccctcactgc ctcaaaagac
     3481 atgggtgtgg aggcaggctc gctgaatgtt accaatacca atctgcgtac caactcgggt
     3541 aatctgcaca ttcaggcagc caaaggcaat attcagcttc gcaataccaa gctgaacgca
     3601 gccaaggctc tcgaaaccac cgcattgcag ggcaatatcg tttcagacgg ccttcatgct
     3661 gtttctgcag acggtcatgt atccttattg gccaacggta atgccgactt taccggtcac
     3721 aataccctga cagccaaggc cgatgtcaat gcaggatcgg ttggtaaagg ccgtctgaaa
     3781 gcagacaata ccaatatcac ttcatcttca ggagatatta cgttggttgc cggcaacggt
     3841 attcagcttg gtgacggaaa acaacgcaat tcaatcaacg gaaaacacat cagcatcaaa
     3901 aacaacggtg gtaatgccga cttaaaaaac cttaacgtcc atgccaaaag cggggcattg
     3961 aacattcatt ccgaccgggc attgagcata gaaaatacca agctggagtc tacccataat
     4021 acgcatctta atgcacaaca cgagcgggta acgctcaacc aagtagatgc ctacgcacac
     4081 cgtcatctaa gcattaccgg cagccagatt tggcaaaacg acaaactgcc ttctgccaac
     4141 aagctggtgg ctaacggtgt attggcactc aatgcgcgct attcccaaat tgccgacaac
     4201 accacgctga gagcgggtgc aatcaacctt actgccggta ccgccctagt caagcgcggc
     4261 aacatcaatt ggagtaccgt ttcgaccaaa actttggaag ataatgccga attaaaacca
     4321 ttggccggac ggctgaatat tgaagcaggt agcggcacat taaccatcga acctgccaac
     4381 cgcatcagtg cgcataccga cctgagcatc aaaacaggcg gaaaattgct gttgtctgta
     4441 aaaggaggaa atgcaggtgc gcctagtgct caagtttcct cattggaagc aaaaggcaat
     4501 atccgtctgg ttacaggaga aacagattta agaggttcta aaattacagc cggtaaaaac
     4561 ttggttgtcg ccaccaccaa aggcaagttg aatatcgaag ccgtaaacaa ctcattcagc
     4621 aattattttc ctacacaaaa agcggctgaa ctcaaccaaa aatccaaaga attggaacag
     4681 cagattgcgc agttgaaaaa aagctcgcct aaaagcaagc tgattccaac cctgcaagaa
     4741 gaacgcgacc gtctcgcttt ctatattcaa gccatcaaca aggaagttaa aggtaaaaaa
     4801 cccaaaggca aagaatatct gcaagccaag ctttctgcac aaaatattga cttgatttcc
     4861 gcacaaggca tcgaaatcag cggttccgat attaccgctt ccaaaaaact gaaccttcac
     4921 gccgcaggcg tattgccaaa ggcagcagat tcagaggcgg ctgctattct gattgacggc
     4981 ataaccgacc aatatgaaat tggcaagccc acctacaaga gtcactacga caaagctgct
     5041 ctgaacaagc cttcacgttt gaccggacgt acgggggtaa gtattcatgc agctgcggca
     5101 ctcgatgatg cacgtattat tatcggtgca tccgaaatca aagctccctc aggcagcata
     5161 gacatcaaag cccatagtga tattgtactg gaggctggac aaaacgatgc ctataccttc
     5221 ttaaaaacca aaggtaaaag cggcaaaatc atcagaaaaa ccaagtttac cagcacccgc
     5281 gaccacctga ttatgccagc ccccgtcgag ctgaccgcca acggtatcac gcttcaggca
     5341 ggcggcaaca tcgaagctaa taccacccgc ttcaatgccc ctgcaggtaa agttaccctg
     5401 gttgcgggtg aagagctgca actgctggca gaagaaggca tccacaagca cgagttggat
     5461 gtccaaaaaa gccgccgctt tatcggcatc aaggtaggta agagcaatta cagtaaaaac
     5521 gaactgaacg aaaccaaatt gcctgtccgc gtcgtcgccc aaactgcagc
//
LOCUS       DBBZXU010000117         5569 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.117, whole genome shotgun sequence.
ACCESSION   DBBZXU010000117 DBBZXU010000000
VERSION     DBBZXU010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5569)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5569)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5569
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.117"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            25..1362
                     /locus_tag="ACJJDE_001843"
     CDS             25..1362
                     /locus_tag="ACJJDE_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HGG7541718.1"
                     /translation="MSNHTSWSSKIGFVLAAAGSAIGLGAIWKFPYTAGTNGGAVFFL
                     LFLIFTILVALPVQLAEFYIGRTGGKNAVDSFRALRPGTQWLWVGRMGVAACFILLSF
                     YSVVGGWVLNYVVHSFTGAIHAGADFEALFGTTISNPAGSLSYQALFMLITVWVVKGG
                     ISDGIEKANRYLMPGLFILFIALAIRSLTLPGAMEGVSFLLKPNWSYFKADTMITALG
                     QAFFALSIGVSAMITYASYLGKDQDMFRSGHTIMWMNLLVSLLAGLVIFPAVFAFGFE
                     PSQGPGLIFIVLPAVFMKMPFGTVLFAVFMLLVVFATLTSAFSMLETVIASTIRQDER
                     KRKKHTWLIGTAIFIVGIPSALSFGVWGEFKVFGKTIFDLWDYVISAVIMPIGALSVS
                     IFTAWIQDKQSVLKDAGSGSTVPRAVLLLWLNTLRYLAPIAIIIVFINSLGIL"
     gene            complement(1597..2193)
                     /locus_tag="ACJJDE_001844"
                     /pseudo
     CDS             complement(1597..2193)
                     /locus_tag="ACJJDE_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222110.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0017013 - protein flavinylation [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
     gene            complement(2202..2996)
                     /locus_tag="ACJJDE_001845"
     CDS             complement(2202..2996)
                     /locus_tag="ACJJDE_001845"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004799 - thymidylate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HGG7541719.1"
                     /translation="MKAYLDLMRHVLDNGTDKSDRTGTGTRSVFGYQMRFDLGKGFPL
                     LTTKKLHLRSIIHELLWFLKGDTNIKYLKDNNVSIWDEWADENGDLGPVYGYQWRNWP
                     APDGRHIDQIANVVEQIKKNPDSRRLIVSAWNPALVDEMALPPCHALFQFYVADGKLS
                     CQLYQRSADIFLGVPFNIASYALLTMMMAQVCGLEAGEFVHTFGDAHLYRNHFEQAAL
                     QLEREPRALPVMKINPEVKDLFAFKFEDFELEGYDPHPHIKAAVSV"
     gene            3419..4753
                     /gene="gdhA"
                     /locus_tag="ACJJDE_001846"
     CDS             3419..4753
                     /gene="gdhA"
                     /locus_tag="ACJJDE_001846"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016639 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HGG7541720.1"
                     /translation="MTDLNTLFANLKQRNPNQEPFHQAVEEVFMSLDPFLAKNPKYTQ
                     QSLLERIVEPERVVMFRVTWQDDKGQVQVNRGYRVQMSSAIGPYKGGLRFHPTVDLGV
                     LKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELYRHIGADTD
                     VPAGDIGVGGREIGYLFGQYKKIRNEFSSVLTGKGLEWGGSLIRPEATGYGCVYFAQA
                     MLQTRNDSFEGKRVLISGSGNVAQYAAEKAIQLGAKVLTVSDSNGFVLFPDSGMTEAQ
                     LAALIELKEVRRERVATYAKEQGLQYFENQKPWGVAAEIALPCATQNELDEEAAKTLL
                     ANGCYVVAEGANMPSTLGAVEQFIKAGILYAPGKASNAGGVATSGLEMSQNAIRLSWT
                     REEVDQRLFGIMQSIHESCLKYGKVGDTVNYVNGANIAGFVKVADAMLAQGF"
     gene            4895..5269
                     /locus_tag="ACJJDE_001847"
     CDS             4895..5269
                     /locus_tag="ACJJDE_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541721.1"
                     /translation="MIMDQYYMELKNKLSNRPILLDNTNDFLFVLVNTVKAMIENTDK
                     SQLSELDKILDGVTSQELKLAYDFCQGKFGQAGFSYRRHPNYFYLSSLIATFPEFELS
                     KADRDYLKGIINFDNYLLYELD"
     gene            5313..>5569
                     /locus_tag="ACJJDE_001848"
     CDS             5313..>5569
                     /locus_tag="ACJJDE_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone acetyltransferase"
                     /protein_id="HGG7541722.1"
                     /translation="MIELKLVDESSFQAVLDLKISEADERARFVAPNVRSLADAWLYR
                     ENEDVFPRAIYWDKQVVGFLLLEIDKDEAEYFIWRIMIGQQ"
BASE COUNT         1392 a         1420 c         1349 g         1408 t
ORIGIN      
        1 ctttcacatt tcttaataaa ttttatgagt aaccatactt cttggtcgtc caaaatcggt
       61 ttcgtccttg ctgcggcagg ttcggccatc ggtttgggcg cgatttggaa attcccttat
      121 acggcaggca ccaacggcgg cgcggtgttt ttcctgctgt ttttgatatt tactatcttg
      181 gtcgccctgc ccgtccagct tgccgagttt tatatcgggc gcacgggcgg taaaaatgcc
      241 gtcgattcct tcagggctct gcgtccgggc acgcaatggc tttgggtcgg gcgcatgggc
      301 gttgccgcct gctttatttt gctgtcgttt tacagcgtgg tcggcggatg ggtattgaat
      361 tatgtcgtcc acagttttac aggggcaatc catgcaggag cggactttga agccctgttc
      421 ggcacaacga tttccaatcc ggcaggttcg ctgtcctatc aggcactgtt tatgctgatt
      481 acggtttggg tggtcaaagg cgggatttca gacggcattg aaaaggcaaa ccgttatctg
      541 atgccggggc tgtttatcct ctttattgcg ctggcaatcc gttcgctgac gctgccgggt
      601 gcaatggagg gcgtgtcttt cctgctcaaa ccgaattggt cgtactttaa agccgatacg
      661 atgattacgg ctttgggaca ggcgtttttt gccctgagca tcggcgtttc cgccatgatt
      721 acctacgctt catatttggg aaaagatcag gatatgttcc gttccggcca tacgattatg
      781 tggatgaacc tcttggtttc gctgcttgcc ggcctggtga tttttccggc ggtgttcgcc
      841 ttcggttttg aaccgagcca ggggccggga ttgattttta tcgtattgcc cgcagtgttt
      901 atgaagatgc cgttcggtac ggttttgttt gcggtattca tgcttctggt cgttttcgcc
      961 acgctgactt ccgcattttc gatgttggaa acggtcattg cctcaaccat ccgccaagac
     1021 gagcgcaaac gcaaaaagca cacttggctt atcggcacgg ctattttcat tgtcggcatc
     1081 ccgtccgcgc tgtctttcgg cgtatggggt gagtttaagg ttttcggcaa aaccattttt
     1141 gatttgtggg actatgttat ttccgccgtc attatgccga ttggtgcttt gagtgtttcc
     1201 atctttaccg cctggattca ggacaagcag tctgtgttaa aagatgccgg atcgggcagc
     1261 accgtaccac gggcagtgct gctgctgtgg ctgaatacct tgcgctacct tgccccgatt
     1321 gccattatta ttgttttcat caattctttg ggcatccttt aaaagccctc caaacggcaa
     1381 aaatgccgtc tgaaagcctt tcagacggca tttttgcttc aggttcagcc tatttcgttc
     1441 aaagtatagt ggattaacaa aaatcaggac aaggcgacga agccgcagac agtacagata
     1501 gtacggaacc gattcacttg gtgcttgagc accttagaga atcgttctct ttgagctaag
     1561 ccgaggcaac gccgtactgg tttttgttaa tccactatag ccttgcgcga tgccgttcaa
     1621 ggacaaaccc ataccctttt cggtaaaacg gatttcacgg tcgtcaaacg agactttgcc
     1681 gaagccgacc cgcttcaggg cttccttcac gctattctcc ggcggcggcg tttccgcatc
     1741 gggatgggcg gaaaaataat cggcatacag tttccacaaa acctgaaccg tcggatcgaa
     1801 cgcgccttcc gtcagcgcgt gaatatcgcg gcacaggctc aacagttcca aaaaatccgc
     1861 cgacggcgaa gtcagataac cgtcacggtt caggcggctg atcaggctgt cttcacggta
     1921 aaggctgaac attttttcca aacgcgccac ttccgccaaa accttattga ccaaatccgc
     1981 cgcctgtctg tcgtccacgc cgaacagacg cagctccgca ccggaaccca gcgcgacacc
     2041 tttccagaaa aacacatttt cattgtgttt ttcatcttta ttgcgttttt catcatcggc
     2101 ggcaaaagga ttcggcaaaa aagaaaccgc cgcgcccgcc gccgcaacgg cggcaactgt
     2161 caaaaaacgc ctgcgcccga aatgcctgcc cataccgcct cctaaaccga cactgccgcc
     2221 ttgatgtgcg gatgcggatc gtagccttcc aactcaaaat cttcaaattt gaaggcaaac
     2281 aaatctttga cttcaggatt gattttcatc acaggcaagg cgcgcggttc gcgttccaac
     2341 tgcaatgcgg cctgctcgaa atggttgcgg tacaggtgcg cgtcgccaaa cgtatggaca
     2401 aactcgcccg cctccaatcc gcacacttgc gccatcatca tggtcaacag cgcgtagctg
     2461 gcaatattaa acggcacacc aaggaaaata tccgcgctgc gctggtaaag ctggcaggac
     2521 agtttgccgt cggcaacgta aaactgaaac agcgcgtggc agggcggcaa tgccatttca
     2581 tcgaccaaag ccggattcca cgccgataca atcaggcggc gcgagtcggg gtttttctta
     2641 atttgttcca ccacattggc gatttggtcg atatgcctgc cgtcgggcgc gggccagtta
     2701 cgccactggt agccgtaaac cgggcctaag tcgccgtttt cgtccgccca ctcgtcccaa
     2761 atggaaacat tgttgtcctt taggtatttg atattggtat cgcctttgag aaaccaaagc
     2821 agctcgtgga taatcgagcg caaatgcagc tttttggtcg tcagcagcgg aaaacctttg
     2881 cccaagtcaa aacgcatctg ataaccgaat acggagcgcg tgcccgtacc ggtgcggtct
     2941 gatttgtccg taccgttgtc gaggacgtgg cgcatcaagt ccaaataggc cttcatcatc
     3001 atctttcatc aaattaaacg gcgcatattg taacatttcc ggccaacgcc cgagtccgga
     3061 caaacgcaca cgccgccccg ccggacgata aaaacgcaga tacaggcagg caggattgtt
     3121 ggcaatttca gtccttttcc acagtaaaac ccagtgggaa aacaaaatta ccttgattgg
     3181 aatcaaaaaa tctagtttaa ttacttagaa taaaatttca ataatatttt tatttacgaa
     3241 attaatttat gattattgat taattatcgg caacaaacat caaacatcga aaacatggaa
     3301 aaaataatgt caacaatttt tgccaaatcg ggcttggcat cagaaaaaaa taggtttata
     3361 ttcccaccta caaatttgtt ttcccattag tacactatca accaaaagga gtatccgaat
     3421 gactgacctg aacaccctgt ttgccaacct caaacaacgc aatcccaatc aggagccgtt
     3481 ccatcaggcg gttgaagaag tcttcatgag tctcgatccg tttttggcaa aaaatccgaa
     3541 atacacccag caaagcctgc tggaacgcat cgtcgaaccc gaacgcgtcg tcatgttccg
     3601 cgtaacctgg caggacgata aagggcaagt ccaagtcaac cggggctacc gcgtgcaaat
     3661 gagttccgcc atcggtcctt acaaaggcgg cttgcgcttc catccgaccg tcgatttggg
     3721 cgtattgaaa ttcctcgctt ttgaacaagt gttcaaaaac gccttgacca ccctgcctat
     3781 gggcggcggc aaaggcggtt ccgacttcga ccccaaaggc aaatccgatg ccgaagtaat
     3841 gcgcttctgc caagccttta tgaccgaact ctaccgccac atcggcgcgg acaccgatgt
     3901 tccggccggc gacatcggtg taggcgggcg cgaaatcggc tacctgttcg gacaatacaa
     3961 aaaaatccgc aacgagtttt cttccgtcct gaccggcaaa ggtttggaat ggggcggcag
     4021 cctcatccgt cccgaagcga ccggctacgg ctgcgtctat ttcgcccaag cgatgctgca
     4081 aacccgcaac gatagttttg aaggcaaacg cgtcctgatt tccggttccg gcaacgtggc
     4141 gcaatacgcc gccgaaaaag ccatccaact gggcgcgaaa gtgctgaccg tttccgactc
     4201 caacggcttc gtcctcttcc ccgacagcgg tatgaccgaa gcgcaactcg ccgccttgat
     4261 cgaattgaaa gaagtccgcc gcgaacgcgt tgccacctac gccaaagagc aaggtctgca
     4321 atactttgaa aaccaaaaac cgtggggcgt cgccgccgaa atcgccctgc cctgcgcgac
     4381 ccagaacgaa ttggacgaag aagccgccaa aaccctgttg gcaaacggct gctacgtcgt
     4441 tgccgaaggt gcgaatatgc cgtcgacttt gggcgcggtc gagcaattta tcaaagccgg
     4501 catcctctac gccccgggaa aagcctccaa tgccggcggc gtagcaactt caggtttgga
     4561 aatgagccaa aacgccatcc gcctgtcttg gactcgtgaa gaagtcgacc aacgcctgtt
     4621 cggcatcatg caaagcatcc acgaatcctg tctgaaatac ggcaaagtcg gcgacacagt
     4681 aaactacgtc aatggtgcga acattgccgg tttcgtcaaa gttgccgatg ccatgctggc
     4741 gcaaggcttc taagcaaacg ccgccgctcc gcaaacaaaa tgccgtccga accgcaaatg
     4801 ctgttcagac ggcatttcat tatccgcccg ttcgaatcgg gtgatactat ttgtatccag
     4861 aattgttgga tagtttggga gtggagagga agaaatgatt atggaccaat actatatgga
     4921 gttaaagaat aagttatcta acagaccaat cctactggat aatactaatg attttctttt
     4981 tgttttagta aatacagtga aagctatgat agaaaatact gataaaagtc agctttcaga
     5041 gttagataaa attttagacg gtgtcacaag tcaagaattg aaacttgcct atgatttttg
     5101 tcaagggaaa ttcggtcaag caggtttttc ttatcgtagg cacccgaatt atttttattt
     5161 gtccagttta attgcgactt ttccagaatt tgagttgtct aaagcagacc gagattacct
     5221 caaaggaatc ataaattttg ataactacct tttatatgag ttagattagt ctttaatcac
     5281 ctcaaaaccc tatttattca aaaggagaaa aaatgattga gctgaaatta gtagatgaga
     5341 gcagttttca ggcagtgctg gatttgaaaa tatctgaagc tgatgaacga gcacgttttg
     5401 tggctccaaa tgtacgctct ttagctgacg catggctcta ccgggaaaat gaagatgtgt
     5461 ttccgagggc aatctattgg gataagcaag tggttggctt tctcctgctg gaaatagaca
     5521 aggatgaagc agaatacttt atctggcgga taatgattgg tcagcagtg
//
LOCUS       DBBZXU010000118         5453 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.118, whole genome shotgun sequence.
ACCESSION   DBBZXU010000118 DBBZXU010000000
VERSION     DBBZXU010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5453)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5453)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5453
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.118"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>5453
                     /locus_tag="ACJJDE_001849"
     CDS             <1..>5453
                     /locus_tag="ACJJDE_001849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7541723.1"
                     /translation="VNAEGKLVNTGMIAATGENHAVSLHARNVHNSGTVASQDDANIH
                     SQTLDNSGTVLSSGQLTVRNLGRLKNHNNGTIQAARLDMSTGGLDNTGNITQTGSQAL
                     DLVSAGKFDNSGKIGVSDVPQTGLNPNPSVIPQIPSTATGSGSSTVLASKPGSNNPVS
                     PTAPAKNYAGGRIQTTGAFDNAGSINAGGQIDIAAQNGLENSGSLNAAKLRVSGDSFN
                     NTVKGKLQAHDLAVNTQTAKNSGHLLTLTGKIDNRELHNAGEIAANNLTLIHSGRLSN
                     DKKGNIRAAHLQLDTAGLHNAGNILADSGTVTTKNNLRNTGKVSVARLNTEGQTLDNT
                     HGHIEAETVNIQSQQLTNQSGHITATEQLTINSRNVDNQNGKLLSANQAQLAVSDGLY
                     NQHGEIATNRQLSIHDKNQNTLALNNADGTIQSAGNVSLQAKSLANNGTLTAGNKLDI
                     ALTDDFVVERDLTAGKQLNLSIKGRLKNTHTLQASHTLKLNAGNIDNQVTGKIIGGEQ
                     TDITSEQHVDNRGLINSDGLTHIGAGQTLTNTGTGKIYGNHIALDAQILLNREETTEG
                     STKAGAIAARKRLDIGAKEIHNQEGALLSSEGIFAVGNRLDEQHHAAGMADTFVNGSA
                     GLEVQGDALMSVRNMQNINNHFKTETYLAKAEKQVRDYTVLGQNTYYQAGKDGLFDNS
                     QGQKDQTTATFHLKNGSRIEANQWHVRDYHIETYKERIIENRPAHITVGGDLTASGQN
                     WLNKDSRIVVGGRIITDDLNQKEITNQSTTGKGRTDAVGTQWDSVTKKGWYSGRKRQR
                     RTERNHTPYHDTQLFTHDFDTPVSVIQQNAASPSFQPAASAIKLIDGVSTAAVNGQRI
                     HTGNVVSLNNATVTLPNSSLYTTHPDNKGWLVETDPQFADYRRWLGSDYMLQQLQLDT
                     NHLHKRLGDGYYEQKLVNEQIHQLTGYRRLDGYRSDEEQFKALMDNGLTAAKTFGLTP
                     GIALSAEQVARLTSDIVWMENQTVTLSDGSTQTVLVPKVYALARKGDLNTSGGLISAE
                     QVLLKLQNGNLTNSGTIAGRQAVLIQARNINSNGNIQADQIGLKAEKSINIDGGQVQA
                     GRLLTAQAQNINLNGTTQTSGNERNGNTAIDRMAGINVVGSHTEQVDNRTSDGILSLH
                     AGNDINLNAATVSNQVKGGTTQITAGNNLNLGTIHTEHREAYGTLDDENHRHVRQSTE
                     VGSSIRTQNGALLRAGNDLKIRQGELEAEEGKTVLAAGRDVTISEGRQITELDTSVSG
                     KSKGILSSTKTQDRYRFSHDEAVGSNIGGGKMIVAAGQDINVRGSNLISDKGIVLKAG
                     HDIDISTAHNRYTGNEYHESKKSGVMGTGGLGFTIGNRKTTDDTDRTNIVHTGSIIGS
                     LNGDTVTVAGNRYRQTGSTVSSPEGRNTVTAKSIDVEFANNRYATDYAHTQEQKGLTV
                     ALNVPVVQAAQNFIQAAQNVGKSKNKRVNAMAAANAAWQSYQAAQQMQQFAPSSSAGQ
                     GQNNNQSPSISVSITYGEQKSRNEQKRHYTEAAASQIIGKGQTTLAATGSGEQSNINI
                     TGSDVIGHAGTALIADNHIRLQSAKQDGSEQSKNKSSGWNAGVAVKIGNGIRFGITAG
                     GNIGKGKEQGGNTTHRHTHVGSTAGQTTIRSGGDTTLKGAQLIGKGIQADTRNLHIES
                     VQDTETYQSKQQNGNVQVTVGYGFSASGSYRQSKVKADHASVTEQSGIYTGEDGYQIK
                     VRDNTDLKGGIITSTRSAESKGKNRFQTATLTHRDIQNHSRYEGRSFGIGGSFDLNGG
                     WDGTVTDKQGRPTDRISPAAGYGSDGDSKNSTTR"
BASE COUNT         1754 a         1413 c         1236 g         1050 t
ORIGIN      
        1 gtgaatgctg agggtaaact ggtcaacaca ggcatgattg cagcgacggg agaaaatcat
       61 gcggtttcac ttcatgcccg caatgttcat aatagcggta cggttgcctc acaggatgat
      121 gccaatattc acagccagac gctggacaat tcaggtacgg tcttatcctc aggtcaattg
      181 actgtccgta atttaggccg tctgaaaaac cataacaacg gtacgatcca ggctgcacgc
      241 ttagatatgt caacaggtgg tttggataac acaggtaata ttactcaaac aggttcacaa
      301 gcattggatt tggtatctgc aggcaaattc gataacagtg gcaagattgg tgtaagtgac
      361 gttccacaga ccggtttgaa tcccaatcca tcagtcatac cacagattcc gagtactgca
      421 acaggttcag gcagcagcac tgtcttggca tctaagcctg gttcaaacaa tcccgtttca
      481 cctacagcac ctgcaaaaaa ctacgccgga ggacgcattc aaacaacagg agcatttgac
      541 aatgcaggat caatcaatgc aggtgggcaa attgacattg ccgcccaaaa cggtttggaa
      601 aattcgggta gtctgaatgc ggctaaacta cgagtatcag gcgattcatt taacaatacg
      661 gtaaaaggca aactccaggc acacgatctg gctgttaaca ctcaaactgc taaaaacagc
      721 ggtcacttat taactctaac cggcaagatt gacaaccgtg aactgcataa tgccggagaa
      781 attgccgcca acaatctgac actcattcat tcgggccgct tgagcaatga taaaaaaggc
      841 aatattcgag ctgcacattt acagcttgat accgccggtt tacataatgc aggtaacatt
      901 cttgccgata gtggaaccgt taccaccaag aataatcttc gcaatacagg aaaagtttct
      961 gttgcacgac taaataccga aggtcagact ctagataata cgcacggaca tatagaggct
     1021 gaaacggtta acatccaaag tcagcaactg actaaccaaa gtggccatat tactgctacc
     1081 gaacaactga ctatcaatag tcgaaatgta gacaaccaaa acggcaaact cctatctgca
     1141 aaccaagcac aattagctgt ttcagacggc ctatacaacc aacatggtga aattgccacc
     1201 aaccggcagt tgtctattca cgataaaaat caaaacactt tggcgttaaa caatgcggat
     1261 ggcacgattc aatctgccgg taatgtatcg ctacaagcca aatcactcgc caacaatggc
     1321 acattaacag ccggtaacaa actggatatt gctttgacgg acgatttcgt cgtagagcgc
     1381 gacctcactg caggcaaaca attaaatcta agcataaaag gccgtctgaa aaatacccat
     1441 accctacaag caagccatac gctcaaactc aatgccggca atatagataa ccaagttaca
     1501 ggcaaaatta ttggtggaga acaaacggac atcacatccg aacagcatgt tgacaacagg
     1561 ggcttgatca acagcgacgg tttgacccac atcggtgcag gtcaaaccct gaccaacacc
     1621 gggacaggca aaatctatgg caaccatatt gccctggacg cgcaaatact gcttaaccgg
     1681 gaagaaacga cggaaggcag taccaaagcg ggggcaatag ctgcaaggaa acgtttggat
     1741 attggagcga aagagattca taaccaagaa ggtgccctac tatccagcga aggtattttt
     1801 gccgtaggta atcgactgga tgaacaacat catgcggcag gcatggccga tacctttgtt
     1861 aatggcagtg ccggtttgga agtacaaggt gatgcattga tgtccgttcg gaatatgcag
     1921 aatatcaata atcactttaa aacagagaca tacttagcca aagcagaaaa gcaagttcgt
     1981 gactacaccg tactggggca aaatacctac tatcaggcag gaaaagacgg tttattcgac
     2041 aactcgcaag gacaaaaaga ccaaactact gctacgttcc atttaaaaaa tggttctcgt
     2101 attgaggcca accaatggca tgtccgagac taccacatcg agacttataa agaacgcatc
     2161 atcgaaaacc ggccggcaca cattactgtg ggcggtgatt tgactgcctc aggtcaaaat
     2221 tggctgaaca aagacagccg gattgtagta ggcgggcgta ttatcactga tgatttaaac
     2281 cagaaagaaa ttaccaatca aagtacaaca ggcaaaggtc gcacagatgc tgtcggcaca
     2341 cagtgggatt cagttacaaa aaaaggatgg tacagcggta gaaaaagaca acgccgtact
     2401 gaaagaaacc atactcctta ccatgatacc caactattta cccacgactt cgacacgcct
     2461 gtatccgtca tccaacagaa tgccgcctcc ccttcctttc aacccgctgc atctgcaatc
     2521 aaactgattg acggagtatc cacggcagcc gtcaatggtc agcgcatcca taccggtaat
     2581 gtggtctcgt taaataacgc tactgttact ctgcctaaca gcagcctcta taccacccat
     2641 cctgacaata aaggctggtt ggttgaaacc gatcctcaat ttgcagacta ccgccgctgg
     2701 ttgggcagcg actacatgtt gcaacaactg caattggaca ccaatcatct acacaaacgg
     2761 ctaggcgacg gctactacga acaaaaactt gttaatgaac aaatccatca gttaacaggc
     2821 taccgccgac tcgacggcta caggagtgat gaagaacaat tcaaagctct gatggacaac
     2881 ggccttactg ctgccaaaac attcggtctc accccaggta tcgccttgag tgcagagcaa
     2941 gttgcccgct taacttcaga tatcgtttgg atggaaaatc aaaccgtcac cctgtctgac
     3001 ggttcgactc aaaccgtact ggttcctaaa gtctatgccc tggcgcgcaa aggtgatctc
     3061 aatacctccg gtggcctgat tagtgccgaa caagtcttac ttaaactgca aaacggcaac
     3121 ctgactaaca gcggtaccat tgcggggcga caggccgtac tcatccaggc acggaatatt
     3181 aacagcaacg gtaacattca agccgaccaa atcggcttaa aagctgaaaa aagtatcaat
     3241 atcgacggcg ggcaggtaca agcaggcaga ctgctgactg cccaagcgca aaatatcaac
     3301 cttaacggta caacccaaac ttccggtaat gaacgtaacg gcaataccgc catcgatcgt
     3361 atggccggca ttaacgtggt cggaagccat actgagcaag tagataacag aacttcagac
     3421 ggcatcctat ccctgcatgc cggcaacgat atcaacctca atgcggccac cgtctctaac
     3481 caagttaaag gcggcactac ccaaattacc gccggcaata atctcaacct cggcaccatt
     3541 cataccgaac atcgcgaagc ctatggtaca ttagatgacg agaaccatcg ccatgtccgc
     3601 caaagtaccg aagtcggcag cagtatccgc acgcaaaacg gcgcactgct tagagccggt
     3661 aacgacttaa aaatccgcca aggcgaactg gaggccgaag aaggcaaaac cgtccttgcc
     3721 gcgggacgtg atgtcactat cagcgaagga cgccaaataa ccgaactgga tacctcggta
     3781 agcggaaaaa gcaaaggcat cctttccagt accaaaacac aggatcgcta ccgcttcagt
     3841 catgatgaag cagtcggcag caacatcggc ggcggcaaaa tgattgttgc agccgggcag
     3901 gatatcaatg tacgcggcag caaccttatt tctgataagg gcattgtttt aaaagcagga
     3961 cacgacatcg atatttctac tgcccataat cgctataccg gcaatgaata ccacgagagc
     4021 aaaaaatcag gcgtcatggg tactggcgga ttgggcttta ctatcggtaa ccggaaaact
     4081 accgatgaca ctgatcgtac caatattgtc catacaggca gcattatagg cagcctgaat
     4141 ggagacaccg ttacagttgc aggaaaccgc taccgacaaa ccggcagtac cgtctccagc
     4201 cccgaggggc gcaataccgt cacagccaaa agcatagatg tagagttcgc aaacaaccgg
     4261 tatgccactg actacgccca tacccaggaa caaaaaggcc ttaccgtcgc cctcaatgtg
     4321 cccgttgtcc aagctgcaca aaacttcata caagcagccc aaaatgtggg caaaagtaaa
     4381 aataaacgcg ttaatgccat ggctgcagcc aatgctgcat ggcagagtta tcaagcagcc
     4441 caacaaatgc aacaatttgc tccaagcagc agtgcgggac aaggtcaaaa caacaatcaa
     4501 agccccagta tcagtgtgtc catcacctac ggcgaacaga aaagtcgtaa cgagcaaaaa
     4561 agacattaca ccgaagcggc agcaagtcaa attatcggca aagggcaaac cacacttgcg
     4621 gcaacaggaa gtggggagca gtccaatatc aatattacag gttccgatgt catcggccat
     4681 gcaggtactg ccctcattgc cgacaaccat atcagactcc aatctgccaa acaggacggc
     4741 agcgagcaaa gcaaaaacaa aagcagtggt tggaatgcag gcgtagccgt caaaataggc
     4801 aacggcatca ggtttggaat taccgccgga ggaaatatcg gtaaaggtaa agagcaaggg
     4861 ggaaatacta cccaccgcca cacccatgtc ggcagcacag ccggacaaac caccatccgc
     4921 agcggcgggg ataccaccct caaaggtgcg cagctcatcg gcaaaggcat acaggcagat
     4981 acgcgcaacc tgcatataga aagtgttcaa gatactgaaa cctatcagag caaacagcaa
     5041 aacggcaatg tccaagttac tgtcggttac ggattcagtg caagcggcag ttaccgccaa
     5101 agcaaagtca aagcagacca tgcctccgta accgagcaaa gcggtattta taccggagaa
     5161 gacggctatc aaatcaaagt cagagacaac acagacctca agggcggtat catcacctcc
     5221 acccgaagtg ccgaaagcaa agggaaaaac cgctttcaga cggccaccct cacccatcgc
     5281 gacattcaaa accacagccg ctacgaaggc agaagcttcg gcataggcgg cagtttcgac
     5341 ctgaacggcg gctgggacgg cacggttacc gacaaacaag gcaggcctac cgacaggata
     5401 agcccggcag ccggctacgg cagcgacgga gacagcaaaa acagcaccac ccg
//
LOCUS       DBBZXU010000119         5390 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.119, whole genome shotgun sequence.
ACCESSION   DBBZXU010000119 DBBZXU010000000
VERSION     DBBZXU010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.119"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            176..2344
                     /locus_tag="ACJJDE_001850"
     CDS             176..2344
                     /locus_tag="ACJJDE_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7541724.1"
                     /translation="MNNPLVNQAAMVLPVFLLSACLGGGGSFDLDSVDTEAPRPAPKY
                     QDVSSEKPQAQKDQGGYGFAMRFKRRFWLPRGKEDEVKLKESDWEETGLPDDPKNLPK
                     RQKSVIDEVKTDDGSNNIHSSPYLMQSNHQNGSTNGGANQPKNEVEDYKDFKYVHSGW
                     FYKHAKSEIKRENGSSSAKSGDDGYIFYHGEKPSRQLPASEKVIYKGVWHFVTDTKKG
                     QKFNDILGTSKGQGDKYSGFSGDDDEQYSNKNESMLKDGQEGYGFTSNLEVDFNNKKL
                     TGKLIRNNRVTNVTPNDKYTTQYYSLDATLRGNRFNGKATATDKPKNDGETKEHPFVS
                     DSSSLSGGFFGPQGEELGFRFLSNDQKVAVVGSAKTQDKAESGGSNGASGGTDAAASN
                     SAAGTSSENSKLTTVLDAVELKSGDKEVQNLDNFSNAAQLVVDGIMIPLLPKDSESGS
                     NQADKGKKGKNGKNGGTDFTYKTTYTPKSDEKDTQAQTGAGGAQAASGTESVNGGQAG
                     TKTYEVEVCCSNLNYLKYGMLTRKNSKSAMQAGGNSSQADAKTEQVEQSMFLQGERTD
                     EKEIPKEQQDIVYRGSWYGHIASSTSWSGNASNATSGNRAEFTVNFADKKITGTLTAD
                     NRQEATFTIDGNIKDNGFEGTAKTAESGFDLDQSNTTRTPKAYITDAKVQGGFYGPKA
                     EELGGWFAYPGDKQTKNATNASGNSSATVVFGAKRQQPVR"
     gene            2431..5175
                     /gene="tbpA"
                     /locus_tag="ACJJDE_001851"
     CDS             2431..5175
                     /gene="tbpA"
                     /locus_tag="ACJJDE_001851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein TbpA"
                     /protein_id="HGG7541725.1"
                     /translation="MQQQHLFRLNILCLSLMTALPVYAENVQAGQAQEKQLDTIQVKA
                     KKQKTRRDNEVTGLGKLVKTADTLSKEQVLDIRDLTRYDPGIAVVEQGRGASSGYSIR
                     GMDKNRVSLTVDGLAQIQSYTAQAALGGTRTAGSSGAINEIEYENVKAVEISKGSNSV
                     EQGSGALAGSVAFQTKTADDVIGEGRQWGIQSKTAYSGKNRGLTQSIALAGRIGGAEA
                     LLIHTGRRAGEIRAHEDAGRGVQSFNRLVPVEDSSNYAYFIVEEECESKNYETCKANP
                     KKDVVGKDERQTVSTRDYTGPNRFLADPLSYESRSWLFRPGFRFENKRHYIGGILEHT
                     QQTFDTRDMTVPAFLTKAVFDANKKQAGSLSGNGKYAGNHKYGGLFTNGENGALVGAE
                     YGTGVFYDETHTKSRYGLEYVYTNADKDTWADYARLSYDRQGIGLDNHFQQTHCSADG
                     SDKYCRPSADKPFSYYKSDRVIYGESHRLLQAAFKKSFDTAKIRHNLSVNLGFDRFGS
                     NLRHQDYYFQNAKRAYSLKTPPKNGNQNSPNGDKSKPYWVSIGGGNVVTEQICRLGNN
                     TYTDCTPRSINGKSYYAAVRDNVRLGRWADVGAGLRYDYRSTHSDDGSVSTGTHRTLS
                     WNAGIVLKPADWLDLTYRTSTGFRLPSFAEMYGWRAGVQSKAVKIDPEKSFNKEAGIV
                     FKGDFGNLEASWFNNAYRDLIVRGYEAQIENGKETAKGDPAYLNAQSARITGINVLGK
                     IDWNGVWDKLPEGWYSTFAYNRVRVRDIKKRADRTDIQSHLFDAIQPSRYVVGLGYDQ
                     PEGKWGVNGMLTYSKAKEITELLGSRALLNGNSRNTKATARRTRPWYIVDVSGYYTIK
                     KHFTLRAGVYNLLNYRYVTWENVRQTAGGAVNQHKNVGVYNRYAAPGRNYTFSLEMKF
                     "
     gene            complement(5172..>5390)
                     /locus_tag="ACJJDE_001852"
     CDS             complement(5172..>5390)
                     /locus_tag="ACJJDE_001852"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541726.1"
                     /translation="RFLFLIFRLRGNDGLEVTRNLKKPKPNGLDSRLRGNDGIRDYGI
                     VGDDGKWWELCKKCRLKPFRRHLRRLDV"
BASE COUNT         1571 a         1334 c         1384 g         1101 t
ORIGIN      
        1 gatatacgtg ggaatgacgg gatataggtt tccgtgcgga cgcgttcgga ttcacgactg
       61 cgcggaaatg acgggatttt ggtgtattcc ctaaaaaaat aaaaaagtat ttgcaaattt
      121 gttaaaaata aataaaataa taatccttat cattctttaa ttgaattggg tttatatgaa
      181 caatccattg gtaaatcagg ctgctatggt gctgcctgtg tttttgttga gtgcttgttt
      241 gggcggaggc ggcagcttcg atcttgattc tgtcgatacc gaagccccgc gtcccgcgcc
      301 aaagtatcaa gatgtttctt ccgaaaaacc gcaagcccag aaagaccaag gcggatacgg
      361 tttcgcgatg cgcttcaagc ggcggttctg gttgccgcgg ggaaaagaag acgaggttaa
      421 actgaaagag agtgattggg aggagacggg attacctgac gatcccaaaa acttacctaa
      481 gcgacagaaa tcggttattg atgaagtaaa aacagacgat ggcagcaata atattcattc
      541 ttccccttat ctcatgcaat caaaccatca aaacggcagc actaatggcg gtgcaaacca
      601 accaaaaaac gaagtagaag attataaaga ttttaaatat gttcattccg gctggtttta
      661 caaacacgcg aaaagcgaaa tcaaaagaga aaacgggtca agcagtgcaa aatctggcga
      721 cgacggctat atcttttatc acggtgaaaa accttcccga caacttcccg cttctgaaaa
      781 agttatctac aaaggcgtat ggcattttgt aaccgatact aaaaagggac aaaaatttaa
      841 cgatattctt ggaacctcaa aaggacaagg agataagtac agcggatttt cgggcgatga
      901 tgatgaacaa tattctaata aaaacgaatc catgctgaaa gatggtcaag agggttatgg
      961 ttttacctca aatttagaag tggatttcaa taataaaaaa ttgacgggca aactgatacg
     1021 caataataga gttacaaacg ttactcctaa cgataaatac accacccaat actacagcct
     1081 tgatgcgacg cttaggggaa accgcttcaa cggcaaggca acggcaactg acaaacccaa
     1141 aaacgacggc gaaaccaagg aacatccctt tgtttccgac tcgtcttctt tgagcggcgg
     1201 ctttttcggc ccgcagggtg aggaattggg tttccgcttt ttgagcaacg atcaaaaagt
     1261 tgccgttgtc ggcagcgcga aaacccaaga caaagccgaa agcgggggca gtaacggtgc
     1321 ttcaggcggc acagatgcgg cagcatcaaa cagtgcggca ggcacgtcgt ctgaaaacag
     1381 taagctgacc acggttttgg atgcggtcga gctgaaatcg ggcgataagg aagtccaaaa
     1441 tctcgacaac ttcagcaacg ccgcccaact ggttgtcgac ggcattatga ttccgctcct
     1501 gcccaaggat tccgaaagcg ggagcaatca ggcagataaa ggtaaaaaag gtaaaaacgg
     1561 taaaaacggc gggacagact ttacctacaa aacaacctac acgccgaaaa gcgatgaaaa
     1621 agacacccaa gcccaaacag gcgcgggcgg cgcgcaagct gcttcgggta ctgagagcgt
     1681 taacggcggg caggcaggaa cgaaaaccta tgaagttgaa gtctgctgtt ccaacctcaa
     1741 ttatctgaaa tacggaatgt tgacgcgtaa aaacagcaag tccgcgatgc aggcaggagg
     1801 aaacagtagt caagctgatg ctaaaacgga acaagttgaa caaagtatgt tcctccaagg
     1861 cgagcgcacc gatgaaaaag agattccaaa agagcaacaa gacatcgttt atcgggggtc
     1921 ttggtacggg catattgcca gcagcacaag ctggagcggc aatgcttcca atgcaacgag
     1981 tggcaacagg gcggaattta ctgtgaattt tgccgataaa aaaattactg gtacgttaac
     2041 cgctgacaac aggcaggagg caacctttac cattgatggt aatattaagg acaacggctt
     2101 tgaaggtacg gcgaaaactg ctgagtcagg ttttgatctc gatcaaagca ataccacccg
     2161 cacgcctaag gcatatatca cagatgccaa ggtgcagggc ggtttttacg ggcccaaagc
     2221 cgaagagttg ggcggatggt ttgcctatcc gggcgataaa caaacgaaaa atgcaacaaa
     2281 tgcatccggc aatagcagtg caactgtcgt attcggtgcg aaacgccaac agcctgtgcg
     2341 ataagcacgg ctgccgaaca atcaagaata aggcctcaga cggcaccgct ctttccgata
     2401 ccgtctgaaa gcgaagagta gggaaacact atgcaacagc aacatttgtt ccgattaaat
     2461 attttatgcc tgtcgctgat gaccgcgctg cccgtttatg cagaaaatgt gcaagccgga
     2521 caagcacagg aaaaacagtt ggataccata caggtaaaag ccaaaaaaca gaaaacccgc
     2581 cgcgataacg aagtaaccgg cctgggcaaa ttggtcaaaa ccgccgacac cctcagcaag
     2641 gaacaggtac tcgatatccg cgacctgacg cgttacgacc ccggcatcgc cgtggtcgaa
     2701 caggggcgcg gcgcaagctc gggttactcg atacgcggta tggacaaaaa ccgcgtttcc
     2761 ttgacggtgg acggcttggc gcaaatacag tcctacaccg cgcaggcggc attgggcggg
     2821 acgaggacgg cgggcagcag cggcgcaatc aatgaaatcg agtatgaaaa cgtcaaagct
     2881 gtcgaaatca gcaaaggctc aaactcggtc gaacaaggca gcggcgcatt ggcgggctcg
     2941 gtcgcatttc aaaccaaaac cgccgacgat gttatcgggg aaggcaggca gtggggcatt
     3001 cagagtaaaa ccgcctattc cggcaaaaac cgggggctta cccaatccat cgcgctggcg
     3061 gggcgcatcg gcggtgcgga ggctttgctg atccacacgg gtcggcgcgc gggggaaatc
     3121 cgcgcacacg aagatgccgg acgcggcgtt cagagcttta acaggctggt gccggttgaa
     3181 gacagcagca attacgccta tttcatcgtt gaagaagaat gcgaaagcaa aaattacgaa
     3241 acgtgtaaag cgaatccgaa aaaagatgtt gtcggcaaag acgaacgtca aacggtttcc
     3301 acccgagact acacgggacc caaccgcttc cttgccgatc cgctttcata cgaaagccga
     3361 tcgtggctgt tccgcccggg ttttcgtttt gaaaacaaac ggcactacat cggcggcata
     3421 ctcgaacaca cgcaacaaac tttcgacacg cgcgatatga cggttccggc attcctgacc
     3481 aaggcggttt ttgatgcaaa taaaaaacag gcgggttctt tgtctggcaa cggcaaatac
     3541 gcgggcaacc acaaatacgg cggactgttt accaacggcg aaaacggtgc gctggtgggc
     3601 gcggaatacg gtacgggcgt gttttacgac gagacgcaca ccaaaagccg ctacggtttg
     3661 gaatatgtct ataccaatgc cgataaagac acttgggcgg attatgcccg cctctcttac
     3721 gaccgtcagg gtatcggttt ggacaatcat tttcagcaga cgcactgttc tgccgacggt
     3781 tcggacaaat attgccgtcc gagtgccgac aagccgtttt cctactacaa atccgaccgc
     3841 gtgatttacg gggaaagcca caggctcttg caggcggcat tcaaaaaatc cttcgatacc
     3901 gccaaaatcc gccacaacct gagcgtgaat ctcgggtttg accgctttgg ctctaatctc
     3961 cgccatcagg attattattt tcaaaacgcc aaacgcgcct attcgttgaa aacgccccct
     4021 aaaaacggca atcaaaacag ccccaacggc gacaagagca aaccctattg ggtcagcata
     4081 ggcgggggaa atgtggttac ggagcaaatc tgccgcttgg gcaacaatac ttatacggac
     4141 tgcacgccgc gcagcatcaa cggcaaaagc tattacgcgg cagttcggga caatgtccgt
     4201 ttgggcaggt gggcggatgt cggcgcgggg ttgcgctacg actaccgcag cacgcattcg
     4261 gacgacggca gcgtttccac cggcacgcac cgcaccctgt cctggaacgc aggcatcgtc
     4321 ctcaaacctg ccgactggct ggatttgact taccgcactt caaccggctt ccgcctgccc
     4381 tcgtttgcgg aaatgtacgg ctggcgggcg ggtgttcaaa gcaaggcggt caaaatcgat
     4441 ccggaaaaat cgttcaacaa agaagccggc atcgtgttta aaggcgattt cggcaacttg
     4501 gaggcaagtt ggttcaacaa tgcctaccgc gatttgattg tccggggtta tgaagcgcaa
     4561 attgaaaacg gcaaagaaac agccaaaggc gacccggctt acctcaatgc ccaaagcgcg
     4621 cggattaccg gcatcaatgt tttgggcaaa atcgattgga acggcgtatg ggataaattg
     4681 cccgaaggtt ggtattctac atttgcctat aatcgtgtcc gtgtccgcga catcaaaaaa
     4741 cgcgcagacc gcaccgatat tcaatcacat ctgtttgatg ccatccaacc ttcgcgctat
     4801 gtcgtcggct tgggctatga ccaaccggaa ggcaaatggg gtgtgaacgg tatgctgact
     4861 tattccaaag ccaaggaaat cacagagttg ttgggcagcc gggctttgct caacggcaac
     4921 agccgcaata caaaagccac cgcgcgccgt acccgccctt ggtatattgt ggatgtgtcc
     4981 ggttattaca cgattaaaaa acacttcacc ctccgtgcgg gcgtgtacaa cctcctcaac
     5041 taccgctatg ttacttggga aaatgtgcgg caaactgccg gcggcgcagt caaccaacac
     5101 aaaaatgtcg gcgtttacaa ccgatatgcc gcccccggtc gcaactacac atttagcttg
     5161 gaaatgaagt tctaaacgtc caaacgccgc aaatgccgtc tgaaaggctt cagacggcat
     5221 tttttacaca attcccacca tttcccatcg tccccgacaa taccgtaatc tcgaatcccg
     5281 tcattcccgc gcaggcggga atccagtccg ttcggtttcg gttttttgag gtttcgggta
     5341 acttctaaac cgtcattccc gcgaaggcgg aaaatcaaaa acagaaacct
//
LOCUS       DBBZXU010000120         5281 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.120, whole genome shotgun sequence.
ACCESSION   DBBZXU010000120 DBBZXU010000000
VERSION     DBBZXU010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5281
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.120"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            131..826
                     /gene="pgl"
                     /locus_tag="ACJJDE_001853"
     CDS             131..826
                     /gene="pgl"
                     /locus_tag="ACJJDE_001853"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013448834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017057 - 6-phosphogluconolactonase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HGG7541727.1"
                     /translation="MFVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRS
                     PIAFFNALSQKDLDWKNVGITLADERIVPTVHADSNTGLVREYLLKNKAEAAMWIPMV
                     EDGKTETELHPDAVVDYALKHYKQPDVLVLGMGNDGHTASIFPKAPQFQTAIDGSAGV
                     ALVHTTPVTAPHERVSMTLDAIAHTGHVFLAIRGEEKKAVFDQAAQGENREYPINLVL
                     NHQGVNCHVFYAE"
     gene            807..1793
                     /locus_tag="ACJJDE_001854"
     CDS             807..1793
                     /locus_tag="ACJJDE_001854"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005536 - D-glucose binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0051156 - glucose 6-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HGG7541728.1"
                     /translation="MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKD
                     YDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDT
                     LILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWV
                     ALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKP
                     AKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRV
                     LEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV"
     gene            1843..2691
                     /gene="hexR"
                     /locus_tag="ACJJDE_001855"
     CDS             1843..2691
                     /gene="hexR"
                     /locus_tag="ACJJDE_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002239863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HexR"
                     /protein_id="HGG7541729.1"
                     /translation="MLSKISESLANLSGAERKVAECALAEPKWFVHAAVAEIAERASV
                     SQPTVIRFCRSLGYKGLPEFKLALSASIGHEGMPYVHEELNADDDMASVVEKVLGNAA
                     ASLLGERRFLKESELENAIATLMHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYV
                     DTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSIAKENGASVIALTRNDSPLAQLA
                     DCVLSVATQENAELYTPMVSRLLQLAVIDILAIGLALRLGDAASLQLQKSKKSIHNKH
                     IDYDKD"
     gene            2812..4458
                     /gene="pgi"
                     /locus_tag="ACJJDE_001856"
     CDS             2812..4458
                     /gene="pgi"
                     /locus_tag="ACJJDE_001856"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HGG7541730.1"
                     /translation="MKHLHDLPAWSKLWNHFDDSKTLHMREMFEQDPQRAERYWLQVG
                     GLTLDYSKNRINDETMSLLFELAREAGVPERMRQMFHGEKINTTENRAVLHVALRNRT
                     NSPIVVDGEDVMPKVNRVLQRMGEFAHEVRSGSWLGYTNQVITDVVNIGIGGSDLGPL
                     MMCTALKPFGHPRLNMHFVSNVDGSQLRDVLSKVHPETTLFIIASKTFTTQETLTNAL
                     TAREWFLNHAGDEEAVAKHFAAVSTNQKAVAEFGIDTANMFEFWDWVGGRYSLWSAIG
                     LPIMLYLGEENFIEMLNGAHLMDQHFINTPLERNLPVILALIGIWYINYYGGGSHVIA
                     PYDQHLHRLPKFIQQLDMESNGKQVTLDGKAVGHETSPIIWGETGINGQHAFFQLLHQ
                     GTHITPIDLIASLEKRSNLPGHHEILLANVFAQAEAFMRGKTPDEVRAELKAQGMDEA
                     RIEELVPHKTFSGNRPTNLILMDKVNPRNMGSLIAMYEHKTFVQGIIWGINSFDQWGV
                     ELGKQLAKTILGELTGETEPQKHDSSTERLINLYLQTNRK"
     gene            4472..5023
                     /locus_tag="ACJJDE_001857"
     CDS             4472..5023
                     /locus_tag="ACJJDE_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HGG7541731.1"
                     /translation="MPSERRPFQTAFLSNRKTVGKLAERVQSRYDGLHKFKHICSAAM
                     ALIKEPLDKAKQRNEELEAAEEAAAQEALGREQEVDRVSEWEERYKLSRSEFEQFWKG
                     LPQTIQNKLQASQKTWKSGMDKICANNAKAEGETPNGIKFSELACKTAETEARLEELH
                     NRKKALIDEMAREADKKELPKRL"
BASE COUNT         1349 a         1471 c         1391 g         1070 t
ORIGIN      
        1 aaatttaatc cactataaaa agcagtcccg atatttggta tcaaaagcat aaacaactgt
       61 tcgaccggca tattgctcaa cccgtttcca taacggaata tgccgtctga aataaaaaaa
      121 ggacacaaat atgtttgttt ggcacgaata cgaaaatgcg gcagaagcgg cgcagtcttt
      181 ggctgacgca gtggcggatg ctttgcaggg cgcactggac gagaagggcg gtgcggtgtt
      241 ggcagtttcc ggcggacgtt cgccgattgc atttttcaac gccctgtcgc aaaaagattt
      301 ggattggaaa aacgtcggca tcaccttggc agatgaacgc atcgtgccga ccgtccacgc
      361 cgacagcaat accggtttgg tgcgcgaata cctgttgaag aacaaagcgg aagcggcaat
      421 gtggattcct atggtggaag acggaaaaac tgaaaccgaa ttacatcccg atgctgttgt
      481 cgattatgca ctgaaacatt acaaacagcc cgatgttttg gttttgggta tgggaaacga
      541 cgggcatacg gcttcgattt tcccgaaagc tccgcagttt cagacggcaa tcgacggttc
      601 ggcaggtgtc gcgctggtgc ataccacgcc cgttaccgcg ccgcacgagc gcgtcagtat
      661 gaccttggat gcgattgccc atacggggca tgtgtttttg gcgatacggg gcgaagagaa
      721 aaaagccgtg ttcgaccaag ccgcacaagg cgaaaaccgc gaatatccga tcaacctcgt
      781 tttgaaccat caaggagtga actgccatgt cttctacgcc gaataaacaa gccggatatc
      841 cccgactggt cgccgatatc ggcgggacga atgcacgctt tgcgctggaa accgcgccgc
      901 gcgtcattga aaaagccgcc gtgcttccgt gtaaagacta cgatacggtt accgatgcgg
      961 tgcgtgccta tctgaatcaa agcggtgcaa cagccgtacg gcacgcggca tttgccatcg
     1021 ccaacccgat tttgggcgac tgggtgcaga tgaccaacca ccattgggcg ttttccatcg
     1081 aaaccacccg tcagactttg gggctggaca ccctcatcct tttgaacgac tttaccgcgc
     1141 aggcattggc ggtaacgcag acttcaagca aagacctgat gcaggtaggc gggcaaaagc
     1201 ctgtcgaatt tgcccccaaa gccgttatcg gccccggtac cggcctgggc gtgagcggat
     1261 tggtgcacag ccacgcaggc tgggtggctt tggcgggcga gggcgggcat accagtttcc
     1321 cgccgtttga cgatatggaa gtgctgattt ggcagtacgc caaaaacaaa tacggccatg
     1381 tttccgccga acgctttttg agcggcgcgg gcttgagctt ggtttacgag gctttggctg
     1441 caaaacagaa agccaaaccc gccaaactga tgccgtctga aatcacggaa aaggctttga
     1501 gcggcgcgtc gcctttgtgc cgtcagactt tggacatctt ctgcgccatg ctcggcacgg
     1561 ttgcttccaa cctcgccctg acgctgggcg cgcgcggcgg cgtgtacctg tgtggcggca
     1621 ttattccccg cgtgttggaa tatttcaaaa cttccccgtt ccgcagccgt ttcgagaaca
     1681 agggcaggtt tgaagcatat cttgccgcga ttcccgtgta tgtcgtcttg agcgagtttc
     1741 ccggaatttc cggtgcggct gcggctctcg acaaccattt gagaaacgtt taaccacagc
     1801 ggctccttgc agcggggctg cattatcgaa gggcatatca ttatgttaag caaaatcagc
     1861 gaatcactgg caaacctttc cggtgcggaa cgcaaagtcg ccgaatgtgc attggcggaa
     1921 cccaaatggt tcgtccatgc cgccgttgcc gaaattgccg aacgtgcgtc cgtcagccag
     1981 ccgaccgtca tccgattctg ccgcagcttg ggttataaag ggctgcccga gttcaagctc
     2041 gccttgtccg ccagcatcgg tcatgagggt atgccctatg tccacgaaga actcaacgcc
     2101 gacgacgata tggcaagcgt ggtcgagaaa gtgttgggca atgccgccgc ctcgctgttg
     2161 ggcgaacgcc gcttcctgaa agagtcggag ctggaaaacg ccattgccac gctgatgcac
     2221 gcccgtcgcg tcgagtttta cggtgtcggc aattccggca ttgtggcaca ggacgcgcag
     2281 cataaatttt tccgtttcgg catgtccacc gtcgcctatg tcgatacgca cacgcagctg
     2341 atggcggcat ctgttttgag cgatcaggat gttttggttg ccatttccaa cacgggttcg
     2401 tctatcgaac ttttggatgc ggtcagcatc gccaaagaaa acggcgcgtc tgtcatcgca
     2461 ctgacccgca acgattcgcc tctggcgcaa cttgccgact gcgtgttgag cgttgccaca
     2521 caggaaaatg ccgaactcta cacgcccatg gtttcccgcc tcttgcagct tgccgtcatc
     2581 gacattctcg ccatcggact tgccctgcgc ttgggcgatg ctgccagcct gcaattgcag
     2641 aaaagcaaaa aaagcataca caacaagcac atcgattacg acaaagattg accttcagac
     2701 ggcatcccac aaatgccgtc tgaaatgccg aacaacggtc gtcggcggct tgcggcagtt
     2761 tccggcagcc ttttcatccc acaacaaaaa acctcattca ggagcatata gatgaaacac
     2821 cttcacgact tacccgcatg gtcgaaattg tggaaccact ttgacgacag caaaacattg
     2881 catatgcgcg aaatgttcga gcaagacccg cagcgtgcgg aacgctactg gctgcaagtc
     2941 ggcggactga cgctggacta ctccaaaaac cgcatcaacg acgaaaccat gtcgcttttg
     3001 ttcgagcttg cccgagaagc aggcgtgccg gagcggatgc ggcagatgtt ccacggcgaa
     3061 aaaatcaata ccaccgaaaa ccgcgccgtc ctgcatgtcg cccttcgcaa ccgcaccaat
     3121 tcgccgattg tggttgacgg tgaagatgtg atgcccaaag tcaaccgcgt tttgcaacgt
     3181 atgggcgaat ttgcacacga agtccgcagc ggaagctggc tgggctatac caaccaagtc
     3241 attaccgacg ttgtcaacat cggcatcggc ggatcggatt tgggcccgct gatgatgtgt
     3301 accgcgctca aacctttcgg tcatccgcgc ctcaatatgc acttcgtctc caacgtggac
     3361 ggctcgcaac tgcgcgacgt attgtccaaa gtccaccccg aaaccacgct gttcatcatc
     3421 gcctccaaaa catttaccac gcaggaaacg ctgaccaacg cgctgaccgc gcgcgaatgg
     3481 tttttgaatc atgcgggcga cgaagaagcc gttgccaaac acttcgccgc cgtttccacc
     3541 aatcaaaaag ccgtcgccga attcggcatc gacaccgcca atatgtttga attttgggat
     3601 tgggtcggcg gtcggtacag cctgtggtcc gccatcggat tgccgattat gctgtatctc
     3661 ggcgaagaaa acttcattga aatgctcaac ggcgcgcacc tgatggacca acacttcatc
     3721 aacacaccgc tcgagcgcaa cctgcccgtc attctcgccc tcatcggcat ctggtatatc
     3781 aactactacg gcggcggcag ccacgtcatc gcgccttacg accaacattt gcaccgcctg
     3841 cccaaattca tccagcagct cgatatggaa agcaacggca aacaggttac gttggacggc
     3901 aaagcagtcg gacacgaaac ctcgccgatt atctggggcg aaacgggcat taacggccag
     3961 cacgccttct tccaactgct gcaccaaggc acgcacatta cccccatcga cctgattgcc
     4021 tcgcttgaaa aacgcagcaa cctgcccgga caccacgaaa tcctgcttgc caacgtcttc
     4081 gcccaagcag aagcctttat gcgcggcaaa acccccgacg aagtccgcgc cgaactcaaa
     4141 gcgcagggta tggatgaggc gcgcatcgaa gagctggtcc cgcacaaaac cttctccggc
     4201 aaccgcccga ccaacctcat tctcatggac aaggtcaacc cgcgcaatat gggcagcctg
     4261 attgccatgt acgaacacaa aaccttcgta caaggcatca tttggggcat caacagcttc
     4321 gaccagtggg gcgtggaact cggcaaacaa ctggctaaaa ccattttggg cgaactgacc
     4381 ggcgaaaccg agccgcaaaa gcacgacagt tcgaccgaac gcctgatcaa cctctacctg
     4441 cagaccaacc gcaaataaaa cctgcggaaa aatgccgtct gaacgccgac cgtttcagac
     4501 ggcattttta tcgaacagga aaaccgtcgg taaacttgca gagcgtgtgc aatcccgata
     4561 tgatggtttg cataaattta aacatatatg ttccgcagct atggcactga ttaaagagcc
     4621 gttggacaaa gcgaaacaaa ggaacgaaga acttgaagcg gcagaagaag cggcggcgca
     4681 ggaggcattg ggtcgggagc aggaagtcga ccgcgtatcc gaatgggaag aacgctacaa
     4741 gctgtcgcgc agcgagttcg agcaattctg gaaaggattg cctcaaacca tacagaataa
     4801 gctgcaagcc tcacagaaaa catggaaaag cgggatggat aaaatctgtg ccaacaatgc
     4861 gaaagctgaa ggtgaaacgc caaacggcat aaaattcagc gaactggcat gcaaaacggc
     4921 ggaaaccgaa gcacgcttgg aagagctgca caaccgtaaa aaagccctta tcgacgaaat
     4981 ggccagggaa gcggacaaga aagaactgcc aaagcggctc tgaacagcgc ggttcaggca
     5041 ctgcccgccg atattgccga aaccgtcatg cccgagtacc gcaactgaca aaacggtttg
     5101 aatgccaaat gcgccgacgg cgacgaatac ggcgtggcac aatctgactg ccgtaccaga
     5161 gaaatcaatg cgaaaaccaa agaaatccaa ggttatctga ttgactgaaa cttggatgcg
     5221 ggaatgtcgg cggcttttgc gtttttgtcg tttttatagt gaattaaatt taaaccgata
     5281 c
//
LOCUS       DBBZXU010000121         5263 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.121, whole genome shotgun sequence.
ACCESSION   DBBZXU010000121 DBBZXU010000000
VERSION     DBBZXU010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5263
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.121"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            153..2330
                     /locus_tag="ACJJDE_001858"
     CDS             153..2330
                     /locus_tag="ACJJDE_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014580820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transferrin-binding protein-like solute binding
                     protein"
                     /protein_id="HGG7541732.1"
                     /translation="MCKPNYGGIVLLPLLLASCIGGNFGVQPVVESTPTAYPVTFKSK
                     DVPTSPPAKPSIETTPVNQPAVGAAMRLPRRNIAAFDKNGNEIPDSKQAEEYLPLKEE
                     DILFLDGTPKEQADKLKKEINGRYPNVTIYTSDLKDAVYKYEHVRAGYVYTRFGTDEI
                     EQNSGGKQVTHRLGYDGFVYYSGERPSQSLPSAGTVKYSGNWQYMTDVKRHRAGKAVG
                     IDNLGYITFYGNDVGATSYAAKDVDEREKHPAKYTVDFDKKTLTGQLIKNQYVQKKTD
                     EKKPLTIYNITAKLDGNRFTGSAKVNPDLAKNPAGNERLFFHADADQRLEGGFFGDNG
                     EELAGRFISNDNSVFGVFAGKKTETANAADTKPALPSGKHTKILDSLKISVDEATDGH
                     ARKFAISSMPDFGHPDKLLVEGREIPLVNKEQIIKLADGRKMTVSACCDFLTYVKLGR
                     IKTDRPAAKPKAQDEDSEDEIGESEENEDEISDEEGTEDEVVEDEGSEEDEVSEGDNG
                     ENEEEIAEEETEEEVDEAEEEKVEEPEEELPAEEGNGGSGSILPTPEAPKGRDIDLFL
                     KGIRTAEADIPKTGKAHYTGTWEARIGVPDKKDDQPGTTFIQKDSYANQGAKAEFDVD
                     FGAKSLSGKLTEKNDTHPAVYIENGVIDGNGFHATARTRDNGIDLSGQGSTSPQSFKA
                     NNLLVTGGFYGPQAAELGGNIIDSDRKFGAVFGAKKDNKEVEK"
     gene            2327..5161
                     /gene="lbpA"
                     /locus_tag="ACJJDE_001859"
                     /gene_synonym="tbpA"
     CDS             2327..5161
                     /gene="lbpA"
                     /locus_tag="ACJJDE_001859"
                     /gene_synonym="tbpA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoferrin/transferrin-binding protein LbpA"
                     /protein_id="HGG7541733.1"
                     /translation="MNKKHGFQLTLTALAVAAAFPSYAANPETAAPDAAQTQSLKEVT
                     VRAAKVGRRSKEATGLGKIVKTSETLNKEQVLGIRDLTRYDPGVAVVEQGNGASGGYS
                     IRGVDKNRVAVSVDGVAQIQAFTVQGSLSGYGGRGGSGAINEIEYENISTVEIDKGAG
                     SSDHGSGALGGAVAFRTKEAADLISDGKSWGIQAKTAYGSKNRQFMKSLGAGFSKDGW
                     EGLLIRTERQGRETRPHGDIADGVAYGINRLDAFRQTHDIQSQDKTGQFFLVEGENTL
                     KPVAKLAGYGIYLNRQLNRWVKERIEKNQPLSAEEEAMVREAQARHENLSAQAYTGGG
                     RILPDPMDYRSGSWLAKLGYRFGGRHYVGGVFEDTKQRYDIRDMTEKQYYGTDEADKF
                     RDKSGVYDGDDFRDGLYFVPNIEEWKGDKKLVRGIGLKYSRTKFIDEHHRRRRMGLLY
                     RYENEAYSDNWADKAVLSFDKQGVATDNNTLKLNCAVYPAVDKSCRASADKPYSYDSS
                     DRFHYREQHNVLNASFEKSLKNKWTKHHLTLGFGYDASNAISRPEQLSHNAARISEST
                     GFDEKNQDKYRLGKPEVVEGSVCGYIETLRSRKCVPRKINGSNIHISLNDRFSIGKYF
                     DFSLGGRYDRKNFTTSEELVRSGRYVDRSWNSGIVFKPNRHFSLSYRASSGFRTPSFQ
                     ELFGIDIYHDYPKGWQRPALKSEKAANREIGLQWKGDFGFLEISSFRNRYTDMIAVAD
                     HKTKLPNQAGQLTEIDIRDYYNAQNMSLQGVNILGKIDWNGVYGKLPEGLYTTLAYNR
                     IKPKSVSNRPDLSLRSYALDAVQPSRYVLGFGYDQPEGKWGANIMLTYSKGKNPDELA
                     YLAGDQKRYSTKRASSSWSTADVSAYLNLKKRLTLRAAIYNIGNYRYVTWESLRQTAE
                     STANRHGGDSNYGRYAAPGRNFSLALEMKF"
BASE COUNT         1505 a         1232 c         1400 g         1126 t
ORIGIN      
        1 aggttcgtgg gaatgacgga atgtatctgt actgtctgcg gctcgtcgcc ttgtcctgat
       61 ttttgttaat tcactataaa aacgggttga tattatctgt acatattaat ataatgataa
      121 ttattattaa tcaaatagga ggaaaagtag ggatgtgtaa accgaattat ggcggcattg
      181 tcttgttgcc cttacttttg gcatcttgca tcggcggcaa tttcggcgtg cagcctgttg
      241 tcgaatcaac gccgaccgcg taccccgtca ctttcaagtc taaggacgtt cccacttcgc
      301 cccctgccaa accttctata gaaaccacgc cggtcaatca acctgccgtc ggtgcggcaa
      361 tgcggctgcc aaggcggaat atcgcagctt ttgataaaaa tggtaatgaa attcccgata
      421 gtaagcaggc agaggagtat ctgccgctca aagaggagga tatcctgttt ttagacggta
      481 cgccgaaaga acaggctgat aaacttaaaa aggaaatcaa cggacggtat cctaatgtaa
      541 caatctacac gtccgattta aaagatgctg tgtataaata tgaacatgtc cgggccggat
      601 atgtttatac tagatttgga acagatgaaa tcgaacagaa ctcaggtggt aagcaggtta
      661 cccaccgctt aggttatgat ggttttgtat attattctgg agaacgtcct tcccaatctt
      721 taccgagcgc gggaacggtg aaatattccg gaaactggca atatatgacc gatgtcaaac
      781 gtcatcgagc aggtaaggcg gttggcattg acaatttggg ttatatcaca ttttatggta
      841 acgatgttgg tgcaacttct tatgcggcta aggatgtcga cgaaagggaa aaacatcctg
      901 ctaaatatac ggttgatttc gataagaaaa ctttgacagg tcaattaatt aaaaatcagt
      961 atgtgcaaaa gaaaaccgat gaaaagaaac cactgaccat ttacaacatt actgcaaaat
     1021 tggacggcaa ccgctttacc ggcagtgcca aggtcaatcc tgatttagcg aaaaaccctg
     1081 ccggtaatga gcgtttgttt ttccatgccg atgccgatca gcggcttgag ggcggttttt
     1141 tcggcgataa cggagaagag cttgccggac ggtttatcag caacgacaac agcgtattcg
     1201 gcgtattcgc aggcaaaaaa acagagacag caaacgcagc agatacaaaa cctgccctgc
     1261 cgtctggaaa acacaccaaa atcttggatt ctctaaaaat ttccgttgac gaggcgactg
     1321 atggccatgc ccgtaagttt gccatttcct ctatgcccga ttttggtcat cccgacaaac
     1381 ttcttgtcga agggcgtgaa attcctttgg taaacaaaga acaaatcatc aagcttgccg
     1441 acggcaggaa aatgaccgtc agtgcttgtt gcgattttct gacctatgtg aaactcggac
     1501 ggataaaaac cgaccgcccc gccgccaaac caaaggcaca ggacgaagat tccgaagatg
     1561 aaattggtga aagcgaagaa aacgaagacg aaatcagcga tgaagaaggc acggaagatg
     1621 aagtcgtaga agatgaaggc agcgaagaag acgaagtttc cgaaggtgat aacggtgaaa
     1681 acgaagaaga aatcgccgaa gaagaaaccg aagaagaagt tgatgaagcc gaagaggaga
     1741 aagttgaaga acccgaagaa gaattgccgg cagaagaagg caacggcggt tcaggcagca
     1801 tcctgcccac tccggaagcc cctaaaggca gggacatcga ccttttcctg aaaggtatcc
     1861 gcacggcgga agccgacatt ccaaaaactg gaaaagcaca ctataccggc acttgggaag
     1921 cgcgtatcgg cgtaccagat aagaaagacg atcagcctgg cactacgttc attcaaaagg
     1981 atagctatgc gaatcaaggg gcaaaagcag aatttgacgt tgatttcggc gcgaagtcgc
     2041 tttcaggtaa gttgacagaa aaaaatgata cacaccccgc tgtttatatt gaaaacggtg
     2101 tgattgatgg caacggtttc cacgcgacag cacgcactcg ggataacggt attgaccttt
     2161 ctgggcaggg ttcgaccagc ccgcagagct tcaaagccaa caatcttctt gtaacaggcg
     2221 gcttttatgg accgcaggcg gcggaattgg gcggtaatat tatcgacagc gaccggaaat
     2281 tcggcgcggt attcggtgcg aagaaagata ataaagaggt ggaaaaatga ataagaaaca
     2341 cggttttcag cttaccctga ctgccttggc tgttgccgcc gccttcccgt catatgcggc
     2401 aaaccctgaa acggcggcac ctgatgcggc gcagacccaa tccctgaaag aggttaccgt
     2461 ccgtgccgcc aaagtgggac ggcgatcgaa agaggcgacc ggtttgggca aaatcgtcaa
     2521 aacgtcggaa acgttgaaca aagaacaggt actcggtatc cgcgacctga cgcgctacga
     2581 tccgggcgtg gcggttgtcg aacagggcaa cggcgcgagc ggcggctact cgatacgcgg
     2641 cgtggataaa aaccgtgtgg cggtttcggt tgacggcgtt gcccaaatac aggcgtttac
     2701 cgtgcaggga tcgttgagcg gatacggcgg acgcggcggc agcggtgcaa tcaacgaaat
     2761 cgaatatgaa aacatcagca cggtggaaat cgacaaaggt gccggttcgt ccgatcacgg
     2821 cagcggcgca ctcggcggcg cggtcgcctt ccgcaccaaa gaggcggcag acctgatttc
     2881 agacggcaaa agctggggga tacaggcaaa aactgcctac ggcagtaaaa accgccaatt
     2941 tatgaagtcg ctcggcgcgg gtttcagcaa agatggttgg gaagggctgt taatccgaac
     3001 cgaacgccaa gggcgggaaa cgcgcccgca cggcgatatt gcggatgggg tggcatacgg
     3061 cataaaccgt ttggacgcgt tccgccagac acacgatatt caaagccaag ataaaacagg
     3121 gcaatttttc ttagtagagg gcgagaatac actcaagccc gtggcaaaat tggcgggcta
     3181 cgggatatat ttgaaccgcc agcttaaccg ctgggtaaaa gaacgtattg aaaaaaatca
     3241 gcctttaagt gctgaagaag aagcgatggt gcgggaggcg caggcgcgcc acgaaaacct
     3301 gtccgcccaa gcttacacgg gcggcggcag gatattgccc gatccgatgg attaccgcag
     3361 cggctcttgg cttgccaagc tgggctaccg cttcggcggc aggcattatg tcggcggcgt
     3421 gtttgaggat accaaacagc gttacgatat ccgcgatatg acggaaaaac agtattacgg
     3481 tacggacgag gcggacaagt ttagagacaa gagcggggtg tacgacggcg acgatttccg
     3541 cgacggcttg tattttgtgc cgaatataga agagtggaag ggcgataaaa agttggtcag
     3601 gggcataggt ttgaaatatt cccgcaccaa atttattgat gaacatcacc gccgccgccg
     3661 tatgggtttg ctgtaccgtt atgaaaacga agcgtattct gacaactggg cggataaggc
     3721 ggtgttgtcg tttgacaaac agggcgtggc aaccgacaac aacacgctga agctgaattg
     3781 cgccgtgtat cctgctgtgg acaaatcctg ccgcgcgtcg gcggacaaac cgtattccta
     3841 cgacagcagc gaccgtttcc actaccgcga acagcacaat gttttgaatg cctcgtttga
     3901 gaaatcgctg aaaaacaaat ggacgaaaca ccatctgact ttgggcttcg gttacgatgc
     3961 ttccaacgcg atttcccgcc ctgaacagct ttcccacaat gcggcaagga tttcggaatc
     4021 cacgggattc gatgaaaaga atcaagataa gtaccgtttg ggtaagcccg aagtcgtcga
     4081 agggtcggtc tgcggctaca tcgaaaccct gcgttcccgc aaatgcgtgc caagaaaaat
     4141 caacggcagc aatatccaca tttctttgaa cgaccgtttt tcaatcggca aatattttga
     4201 tttcagcttg ggtggcaggt acgaccggaa aaacttcacc acgtcggaag aactcgtccg
     4261 cagcggacgg tatgttgacc gttcgtggaa cagcggcatc gtgttcaaac cgaaccggca
     4321 tttttctttg tcttaccgcg cctccagcgg cttcagaacg ccctcattcc aagaactttt
     4381 cgggatagac atttatcacg attatccgaa aggctggcag cgtcccgccc tgaaatcgga
     4441 aaaggcagcc aaccgcgaaa tcggtttgca gtggaagggc gatttcggct ttttggaaat
     4501 cagcagcttc cgcaaccgtt ataccgatat gattgccgtt gccgatcaca aaaccaaatt
     4561 gccgaatcag gcaggacaat tgacagagat tgatatacgc gattattaca atgcccaaaa
     4621 tatgtcgctc caaggcgtta atatattggg aaaaatcgac tggaacggtg tgtacggcaa
     4681 actgcccgaa ggtttgtaca ccacattggc atacaaccgc atcaaaccga aatcggtatc
     4741 caaccggccg gacttgtccc tccgcagcta tgctttggat gcggtacagc cgtcgcgtta
     4801 tgttttgggg ttcggatacg accagccaga ggggaaatgg ggcgcaaaca ttatgctgac
     4861 ctattccaaa gggaaaaacc ctgacgagct tgcttatctg gcaggcgatc aaaaacgata
     4921 ttcgacaaaa agagcgtcgt cttcttggtc gacggcagac gtttccgcct atctgaatct
     4981 gaaaaaacgg ctgaccttga gggcggctat ctacaatatc ggcaactacc gctacgttac
     5041 ttgggaatcc ttgcgccaga ctgcggaaag cacggcaaac cggcacggcg gcgacagcaa
     5101 ctatggaagg tatgccgcac cgggcaggaa cttcagcctc gcgctcgaaa tgaagtttta
     5161 aaggaaatac cgtctgaaag cttgatctgc accccaaaag tcggactaaa ccgccaactg
     5221 attaaggtgc aggttttttt gattcgatat aaacaagatt tcc
//
LOCUS       DBBZXU010000122         5165 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.122, whole genome shotgun sequence.
ACCESSION   DBBZXU010000122 DBBZXU010000000
VERSION     DBBZXU010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5165)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5165)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5165
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.122"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            188..1372
                     /gene="ubiM"
                     /locus_tag="ACJJDE_001860"
     CDS             188..1372
                     /gene="ubiM"
                     /locus_tag="ACJJDE_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-demethoxyubiquinol-8 5-hydroxylase UbiM"
                     /protein_id="HGG7541734.1"
                     /translation="MSLHSDILVVGAGPAGLSFAAELAGSGLKVTLIERSPLTVLQNP
                     PYDGREIALTHFSREIMQRLGMWDKIPENEIYPLRDAKVLNGRSDYQLHFPQPTEARG
                     EPADCLGYLISNHNIRRAAYEVVSQLDNVSILTDTVVKEVKTSDNEAQVILENGKILT
                     ARLLLAADSRFSQTRRQLGISSDMHDYSRTMFVCRMKHTLSNQHTAYECFHYGRTIAL
                     LPLEEHLTNTVITVDTDKINSVQNLSPEELAASVKEQLKARLGDMELVSSIHHYPLVG
                     MIAKRFYGKRSALIGDAAVGMHPVTAHGFNLGLSSADILAKLILEAEQRGQDIGAASL
                     LEKYSSKHMLHAHPLYHGTNMMLKLFTNETAPAKLLRGLVLRAGNNFPPLKKLITKQL
                     TG"
     gene            complement(1629..1784)
                     /gene="rpmG"
                     /locus_tag="ACJJDE_001861"
     CDS             complement(1629..1784)
                     /gene="rpmG"
                     /locus_tag="ACJJDE_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009766925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HGG7541735.1"
                     /translation="MRDKIKLESSAGTGHFYTTTKNKRTMPGKLEIKKFDPVARKHVV
                     YKETKLK"
     gene            complement(1816..2049)
                     /gene="rpmB"
                     /locus_tag="ACJJDE_001862"
     CDS             complement(1816..2049)
                     /gene="rpmB"
                     /locus_tag="ACJJDE_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007586227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HGG7541736.1"
                     /translation="MARVCKVTGKRPMSGNNVSHANNKTKRRFLPNLQSRRFWVESEN
                     RWVRLRVSNAALRTIDKVGIDVVLADLRARGEA"
     gene            complement(2299..3825)
                     /gene="farB"
                     /locus_tag="ACJJDE_001863"
     CDS             complement(2299..3825)
                     /gene="farB"
                     /locus_tag="ACJJDE_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     permease subunit FarB"
                     /protein_id="HGG7541737.1"
                     /translation="MDYPPLKGAALAWVTLSLGLAVFMEVLDTTIANVAVPVIAGNLG
                     AATTQGTWVITSFAVANAVSVPLTGFLAKRIGEVKLFTAAAVGFVITSWLCGIAPNLQ
                     SLVVFRILQGFIAGPLIPLSQSLLMASYPPAKRTLALALWAMTVVVAPVLGPILGGWI
                     SGNWHWGWIFFINIPIGIISAWITWKHLKYRETETVKMPTDYVGLTLMVVGIGALQMM
                     LDRGKELDWFASGEIITLGVVALVCLSYFIVWELGEKYPIVDLSLFKDRNFTVGVIAT
                     SLGFMVYMGTLTLLPLVLQTNLGYTSTWAGLAAAPVGILPVFLSPLIGRFGNKIDMRL
                     LVTASFLTFAFTFYWRTDFYADMDIGNVIWPQFWQGAGVAMFFLPLTTITLSHMKGGQ
                     IAAAGSLSNFLRVLMGGVGVSVVSTLWERREALHHTRFAEHITPYSATLHETAAHLSQ
                     QGISDIQTLGIINNTITQQGFIIGSNEIFMAGSLLFIIMIPVIWLAKPPFHSSGGGGH
                     "
     gene            complement(3849..5003)
                     /gene="farA"
                     /locus_tag="ACJJDE_001864"
     CDS             complement(3849..5003)
                     /gene="farA"
                     /locus_tag="ACJJDE_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid resistance MFS efflux transporter
                     adaptor subunit FarA"
                     /protein_id="HGG7541738.1"
                     /translation="MDTHADETKLQNTQAKRKRRLTALTLLFALAAAAAGSAFFLWWQ
                     HEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAK
                     NELIQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHA
                     RAAVSQAQAAVKAALAEESSARAALGGQVSLREQPAVQTAIGRLKDAWLNLQRTQIRA
                     PADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDL
                     YGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNWIKVVQRVPVRIVLNREDVDRHPLR
                     IGLSMTVKVDTSAAGAPVSKTPGAALPEMESTDWSEVDRTVDEILGQSAP"
BASE COUNT         1316 a         1452 c         1239 g         1158 t
ORIGIN      
        1 ataccccaca cccgatttga tacacattaa gctgaaagta aaaatccgca tacaccctcc
       61 cctgcatatt tcttcaacag tgggttttga tataatcgcc tatctgttac agatagttca
      121 aacggcattc aaacccttac aaataccgtc tgaaatcatc ggcatccgtc tatgcaaagg
      181 atattttatg agtttacaca gcgacatcct cgtcgtcggc gcaggcccgg cgggtttaag
      241 ttttgcagcc gaacttgccg gcagcggttt gaaagttacc ctgatcgaac gcagcccact
      301 gactgttctg caaaatcctc catatgacgg acgcgaaatc gccctgaccc atttttcccg
      361 cgaaatcatg cagcgtttgg gtatgtggga caaaattccc gaaaacgaaa tctacccttt
      421 gcgcgatgcc aaagtgctga acggacgttc cgactaccag ctccactttc cccaaccgac
      481 tgaagcgcgc ggcgaacctg ccgactgttt gggctatctg atttccaacc acaatatccg
      541 ccgcgccgcc tatgaagtcg tatcacaact cgacaatgtc agcattctga ccgatacggt
      601 tgtcaaagaa gtcaaaacat ctgacaacga agcacaagtc attttggaaa acggcaaaat
      661 cctgactgca cgcctgcttt tggcggcaga cagccgcttc tcgcaaaccc gtcgacaact
      721 cggtatctcc tccgatatgc acgattacag ccgaaccatg ttcgtctgcc gtatgaaaca
      781 taccctttcc aaccaacata ccgcttacga atgcttccat tacggacgca ccatcgcact
      841 gctgccgctg gaagagcacc tgaccaatac cgtcattacc gtcgataccg ataaaatcaa
      901 cagcgttcaa aacctttcgc ccgaagaatt ggccgcaagc gtaaaagaac agctcaaggc
      961 caggctcggc gatatggaac tggtcagcag catccaccat tacccccttg tcggtatgat
     1021 tgccaaacgt ttctacggca aacgcagcgc gctgatcggc gatgcggctg tcggtatgca
     1081 ccccgttacc gcacacggtt tcaacttggg tctgtccagc gcagatattt tggcaaaact
     1141 gatactcgaa gccgagcagc gcggtcagga catcggcgcg gcttccttgt tggaaaaata
     1201 cagcagcaaa catatgctgc acgcccatcc gctttatcac gggaccaata tgatgctgaa
     1261 gctgtttacc aacgaaaccg cgccggcaaa actgctgcgc ggcttggtat tgcgtgccgg
     1321 caacaatttc ccgccgctga aaaagctgat taccaaacaa ctgaccggtt gaaaactgcc
     1381 gaaatgccgt ctgaaacgtt tcagacggca tttttgtatt atagtggatt aacaaaaatc
     1441 aggacaaggc gacgaagccg cagacagtac aaatacactt ggtgcttcag caccttagag
     1501 aatcgttctc tatccttggc agacggtttg cagcagattc gcatacggca gatgtttcaa
     1561 gcggaaaaga aacacgataa aaataaaaaa gcctccgaac agtcggaggc tttgctttca
     1621 aactgaaatt atttcagttt ggtttctttg tacactacgt gtttgcgggc aaccggatcg
     1681 aattttttaa tttccagttt gccgggcata gtgcgtttgt ttttggtagt ggtgtagaag
     1741 tgaccagtac ctgcactgga ttccagtttg attttatcgc gcattgcagt aatccttaat
     1801 taaatagtgt ttaaattaag cttcgccgcg agcacgcaaa tcagccaata cgacatcaat
     1861 gcctactttg tcgatggtac gcagagcggc gttagaaacg cgcaggcgaa cccagcggtt
     1921 ttcactttct acccaaaaac gacgtgattg caagttgggc aaaaaacggc gtttggtttt
     1981 gttgttggcg tgcgatacgt tgttgccgga catcgggcgt ttgccggtca ctttgcaaac
     2041 tcgtgccata atcagtctcc aaacttctaa aatagtaaaa cgcgatttat accacgaaaa
     2101 acagtgttag ttcaagtgtt ttaaagaaaa acggctgttt tgcgcggata atccttccga
     2161 ttgtcgcatc tgtggaacgt ttgcaggtgc gaaacagatg gggcgcgatt atagcggatt
     2221 tcgggaactg ctgcattcaa aatgccgtcc gaacatattt ccagtatttt cagacggcat
     2281 ttcaagtttt caaatccctc aatgtccacc gccgccactg ctgtggaacg gcggttttgc
     2341 cagccatatg acgggtatca tgataatgaa taacaagctg cctgccataa agatttcatt
     2401 cgatccgatg atgaagccct gctgggtaat ggtattgttg atgataccta gggtttgaat
     2461 gtcggaaatg ccttgttggg acaaatgcgc cgccgtttcg tgcaatgttg cggaataggg
     2521 cgtgatgtgt tcggcaaagc gcgtgtggtg caacgcttcg cgccgttccc acagggtgct
     2581 gacgacggat acgccgacac cgcccatcag cacgcgcagg aaattcgaca ggctgccggc
     2641 ggcggcaatc tgcccgccct tcatgtgcga cagtgtgatg gtggtcagcg gcaggaagaa
     2701 catggcaacg cctgccccct gccaaaactg cggccagatg acgttgccga tatccatgtc
     2761 ggcataaaaa tcggtgcgcc aatagaaagt aaaggcaaag gtcaggaagc tggcggttac
     2821 gagcaggcgc atatcgattt tattgccgaa cctgccgatt aacggagaca ggaagacggg
     2881 caggatgccg acgggtgcgg cggcaagccc cgcccacgtg gaggtatagc ccaggttggt
     2941 ctgcaacact aacggcagca aggtcagcgt ccccatatac accataaaac ccaatgatgt
     3001 ggcaattacg ccgacggtaa aattccgatc tttaaacagc gataaatcga caatcggata
     3061 tttttctccc aattcccaaa caataaaata cgacaaacac accagtgcga ctacgcccaa
     3121 ggtaatgatt tctccagagg cgaaccagtc gagttcctta cccctgtcca gcatcatctg
     3181 taacgcgccg ataccgacta ccatcaatgt aagcccgaca tagtcggtcg gcattttaac
     3241 ggtttccgtt tcccgatatt tcaaatgttt ccatgtaatc catgccgata tgataccgat
     3301 agggatatta atgaagaaaa tccaacccca atgccagttt ccggaaatcc aaccgccgag
     3361 tatcggcccg agaacagggg cgacaacgac ggtcattgcc cacaatgcca gtgccagcgt
     3421 ccgttttgcg ggcggatagg atgccattaa caggctttgc gacaggggaa tcagcggccc
     3481 ggcgataaag ccctgcaaga tgcggaaaac aaccagcgac tgaaggttgg gggcaatacc
     3541 gcacagccac gatgtgatga cgaaaccgac agcggcggcg gtaaacaatt tgacctcgcc
     3601 gatacgtttt gccaaaaagc ccgttaacgg cacggaaacg gcgtttgcca cagcaaaaga
     3661 agtaatgacc cacgtcccct gcgtggttgc cgcaccgagg ttgccggcga tgacgggaac
     3721 ggcgacattg gcgatagtcg tatctaaaac ttccataaat acggcaagcc ccaaagacag
     3781 cgtaacccac gccaatgccg cacccttaag cggtggataa tccattgtgt cctccgtttc
     3841 agacggcatc agggcgcgga ttgcccgagg atttcatcga ccgtccgatc gacttccgac
     3901 cagtcggtac tttccatttc cggcaatgcc gcacccggcg tttttgaaac aggcgcgcct
     3961 gcggcggaag tatccacttt aaccgtcatc gacaaaccga tacgcaacgg atgcctgtcc
     4021 acatcttcgc ggttcagcac gatacggacg gggacgcgct gcaccacttt aatccagttg
     4081 cccgttgcgt tttgcgccgg aatcagcgaa aacgcgctgc ccgtacctgc cgaaaaacct
     4141 gccaccctgc cgcgataaac aatttgtttg ccgtacaaat cggacaccag ctcggcaggc
     4201 tgtccgattt tcatatgccg caactgcgtc tctttaaaat tagcatccac ccacacatcc
     4261 gacagcggca ccaccgccat cagcggcgcg cctgccgcca cctgctgccc gacctgcacc
     4321 gaacgcttcg ccacctgacc gtccgccggc gcgcggattt gcgtccgctg aaggttcaac
     4381 cacgcatctt tcaacctgcc gattgccgtc tgaaccgccg gctgttcgcg caaagaaacc
     4441 tgaccgccca aagccgcacg tgccgaagac tcttccgcca aagccgcctt aactgccgcc
     4501 tgagcctgag acactgccgc acgggcatgt gccagctctt cggcggacac cgcgcccgat
     4561 tccgctaaag cagaccggcg gcgtaaatca tcctgcgcac gtgccaaatc cgctcggcgc
     4621 aaggcaacct gcgcccccgc ctgcgaagtg gcggcatttt gccggcggtt ttgccgcacc
     4681 gcctgaatca gctcgttttt tgcccgctcg taagccagca catcattatc gtcgtccaat
     4741 accgccagca cgtcgccttt tttcacggca tccgtatcgt cgtgcaaaac cttccgcacc
     4801 gtaccgccct tttgcggcgt aacctgaacc acgcgtccgg caacataagc gtcttccgtt
     4861 tcctcttcgt gctgccacca taaaaaaaac gccgacccgg cggctgcggc ggcaagcgcg
     4921 aacagcagcg tcaatgccgt caggcggcgt ttgcgtttgg cttgcgtgtt ttgaagtttt
     4981 gtttcgtccg cgtgcgtatc cataagattg ggttccgaat ttcctgattt catataaaca
     5041 atgttctttc aataggaagc agattctata tccgcgcaat aacgcaatca agtcagtatt
     5101 ttagatgcaa tattcaaaaa acaacgcttc aggcggcaaa actgaaaata tatttcgttt
     5161 atata
//
LOCUS       DBBZXU010000123         5164 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.123, whole genome shotgun sequence.
ACCESSION   DBBZXU010000123 DBBZXU010000000
VERSION     DBBZXU010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 5164)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5164)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5164
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.123"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(32..448)
                     /gene="dksA"
                     /locus_tag="ACJJDE_001865"
     CDS             complement(32..448)
                     /gene="dksA"
                     /locus_tag="ACJJDE_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HGG7541739.1"
                     /translation="MAKLTEQDILNWSGPEDDYMNDDHLAFFRELLVKMQDELIENAS
                     ATTGHLQEHESAPDPADRATQEEEYALELRTRDRERKLLSKIQATIRNIDEGDYGFCA
                     DTGEPIGLKRLLARPTATLSVESQERRERMKKQFAD"
     gene            complement(595..1404)
                     /gene="proC"
                     /locus_tag="ACJJDE_001866"
     CDS             complement(595..1404)
                     /gene="proC"
                     /locus_tag="ACJJDE_001866"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004735 - pyrroline-5-carboxylate
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HGG7541740.1"
                     /translation="MNRVEIMNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRE
                     RLEKELGVETSATLPELHSDDVLILAVKPQDMEAACKNICTNGALVLSVAAGLSVGTL
                     SRYLGGSRRIVRVMPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLEDE
                     AQMHSITGISGSGPAYVFYLLDALQNAAIRQGFDMAEARALSLATFKGAVTLAEQTGE
                     DFEKLQKNVTSKGGTTHEAVEAFRRHRVAEAISEGVCACVRRSQEMERQYQ"
     gene            complement(1435..1843)
                     /locus_tag="ACJJDE_001867"
                     /pseudo
     CDS             complement(1435..1843)
                     /locus_tag="ACJJDE_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815987.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
     gene            complement(1843..2529)
                     /locus_tag="ACJJDE_001868"
     CDS             complement(1843..2529)
                     /locus_tag="ACJJDE_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HGG7541741.1"
                     /translation="MTVLQERYCEVSDRIGKLVLQAGRKPHSVSLIAVGKTFPSDGIR
                     EVYAAGQRDFGENYIQEWYGKTEELADLTDIVWHVIGDVQSNKTKFVAERAHWVHTVC
                     RLKTAVRLSEQRPSSMPPLQVCIEVNIAGEAVKHGVAPEEAVALAVEVAKLPNIVVRG
                     LMCVAKANSSETELKVQFQTMRKLLADLNAAGVKADVLSMGMSDDMPAAIECGATHVR
                     IGSAIFGKRG"
     gene            2649..3692
                     /gene="pilT"
                     /locus_tag="ACJJDE_001869"
     CDS             2649..3692
                     /gene="pilT"
                     /locus_tag="ACJJDE_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HGG7541742.1"
                     /translation="MQITDLLAFGAKNKASDLHLSSGISPMIRVHGDMRRINLPEMSA
                     EEVGNMVTSVMNDHQRKIYQQNLEVDFSFELPNVARFRVNAFNIGRGPAAVFRTIPST
                     VLSLEELKAPSIFQKIAESPRGMVLVTGPTGSGKSTTLAAMINYINETQPAHILTIED
                     PIEFVHQSKKSLINQRELHQHTLSFANALRSALREDPDVILVGEMRDPETIGLALTAA
                     ETGHLVFGTLHTTGAAKTVDRIVDVFPAGEKEMVRSMLSESLTAVISQNLLKTHDGNG
                     RVASHEILIANPAVRNLIRENKITQINSVLQTGQASGMQTMDQSLQSLVRQGLIAPEV
                     ARRRAQNSESMSF"
     gene            3855..5081
                     /locus_tag="ACJJDE_001870"
     CDS             3855..5081
                     /locus_tag="ACJJDE_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilT/PilU family type 4a pilus ATPase"
                     /protein_id="HGG7541743.1"
                     /translation="MNTDNLHDILDEMVQVYSQKKQSRSETPAEIGAHFHPLLDRLCE
                     TAEAQNASDILISKGFPPSLKINSALTPQPQKALTGEETAAIAASTMNAEQSEIFRRD
                     GEINYSVQSRSGTRYRANAYHSQGSAGLVLRRINHVIPQMQELGLPEKLKDLAVAPRG
                     LLIIVGPTGSGKSTTMATMLEHRNKTLPSHIVTIEDPIEFIYKPRRCIFTQREIGVDT
                     INWQTAVQNAMRQSPDVVCIGEVRSRESMEYAMQLAQTGHLCIFTLHANTAPQSLERI
                     LNFYPKEQHNQILIDIALNLTGIICQRLALKQDKTGRTAVVDLLINTPAIQDFILKGD
                     LMNISKIMETAKTDGMQTMDQNLFELYRHGIISYEEALRQSVSANNLRLHIQLHKEGK
                     TPELLYDRVNGLNLIS"
BASE COUNT         1280 a         1611 c         1166 g         1107 t
ORIGIN      
        1 ggggattcat acggcatttt gtttgccgcc atcagtcggc aaactgtttt ttcatcctct
       61 ctcggcgttc ttgggactca acagataaag tggctgtcgg gcgtgccagc agccgcttca
      121 gaccgatagg ctctcccgta tcggcacaga atccataatc cccttcatca atattgcgga
      181 tggtcgcctg tattttactg agaagttttc gttcccgatc gcgggtacgg agttccaatg
      241 cgtactcttc ttcctgtgtg gcacggtcgg caggatcggg ggctgattcg tgttcttgga
      301 gatgccctgt cgtagcggaa gcattttcga tgagttcgtc ttgcattttt accagcaatt
      361 cgcggaaaaa agccaaatgg tcgtcattca tataatcgtc ttccggcccg ctccaattca
      421 aaatatcttg ttctgtcagc tttgccataa tgtatatcct ctcggttcac cgaaaaaaac
      481 aaagcaccac aaagtggctt tattcctttg atttttataa ggcttattgc ctaaggcgtt
      541 tttgaaaacg cgcatcataa cacgttttgg attggttttt ttattttctt tacattattg
      601 atattgccgt tccatttcct gcgaacggcg cacacaggca caaacgccct cgcttatggc
      661 ttcggcgaca cgatgccgcc tgaaagcttc cacggcttcg tgggttgtcc cgccttttga
      721 cgttacattt ttttgaagct tctcgaaatc ttcacccgtc tgctcggcaa gggtaaccgc
      781 tcctttaaac gttgccagac tgagcgcgcg tgcttctgcc atatcaaacc cttgtcggat
      841 ggcggcattt tgcaatgcgt ccagcagata aaacacataa gccggtccgc tgccgctgat
      901 accggtaatg ctgtgcattt gcgcttcatc ttccaaccaa acggtcaaac cgactgattt
      961 catgattcga tcggcaatcc tgcggtctgt ttccgatact tccgcttcgg catacatacc
     1021 ggatacgccc agtcctattt tcccgggcgt attcggcata acccggacaa tgcggcggct
     1081 tcccccgagg taacggctga gcgtaccgac tgacaatccg gctgcgacag aaagcaccaa
     1141 tgcgccgttg gtgcagatat ttttgcacgc ggcttccata tcctgcggtt tgacggcaag
     1201 gattaaaaca tcgtcggaat gaagctccgg cagggttgcc gaagtttcga cccccaactc
     1261 tttttccaaa cgttcgcgtt tttccgcacc ccgattggct atatagatgc ggtaaccgcc
     1321 ttgtttgacc aatccgcccg caacggcagc cgccatattg ccgccgccga gaaaataaac
     1381 attcattatt tctaccctat tcaaaattac ctgactaaat tcattcccaa ttttttacca
     1441 tcggacgcgc tcggacagac cgttgcgccg caacccctgc ttttccaagc agtcaaatcc
     1501 tccctgtttg aacgtctcaa tcaaaggttt gccgtcacgc gtacgccaat ccagcccgca
     1561 ggcttcaaac ttccctattt tcctgtaaaa gtaagattgt tgtgcggatt catattcgtt
     1621 tgccctgacg gaacgattgc cgtctgaaag cggtatctcg tagtcctcta aagacggcgg
     1681 actctcgccg ccaatatccc aaaaatcgat ggcagccggt tttctcggct tacaccagcc
     1741 ggacagggac gaacactcaa taccaacccg ccaaccggca gcctgcaacc gtaaatgcaa
     1801 gcaacgcagc cattgccgta tattttattg cccgaatttc catcagcccc ttttcccgaa
     1861 aatcgcgctg ccgatacgga cgtgtgtcgc accgcactca atggcggcag gcatatcgtc
     1921 cgacatcccc atagacagca cgtctgcctt aacgccagcc gcattgaggt cggcaagcag
     1981 tttccgcatc gtttgaaatt gcaccttcaa ctccgtttca ctgctgttgg ctttggcaac
     2041 acacatcagt ccgcgtacga cgatattcgg cagcttcgcc acttccacag caagcgcgac
     2101 tgcttcttcg ggcgcgacac cgtgcttcac cgcctcgccc gcaatattca cctcgataca
     2161 cacctgcaag ggcggcattg aggaaggacg ctgttcgctc aaccggacag cggttttcag
     2221 acggcatacg gtatgcaccc aatgcgcgcg ttcggcgaca aatttggttt tattggactg
     2281 cacatcgccg atgacgtgcc acacgatgtc ggtcaaatcc gccaactctt ccgttttgcc
     2341 gtaccactcc tgaatatagt tctcgccgaa atcacgctgt ccggcggcgt aaacttcgcg
     2401 gatgccgtct gaagggaaag tcttaccgac ggcaatcagg ctgacggaat gcggcttcct
     2461 tcccgcctgc agaaccaatt ttccgatacg gtcggacacc tcacaataac gttcttgcaa
     2521 caccgtcata gattatcccc taattaaaaa tgattaaaca gttgaaaccc ctccagtcag
     2581 ggcggtacaa tcaaggttgt tagaaccatt ccaaccaatc gaaacattat actaaacaga
     2641 gccgcattat gcagattacc gacttactcg ccttcggcgc taaaaacaaa gcatccgacc
     2701 ttcacctgag ttcgggcata tcccctatga ttcgggttca cggcgatatg cggcgcatca
     2761 accttcccga aatgagcgcg gaagaggtcg gtaatatggt aacttcggtg atgaacgacc
     2821 accagcggaa aatctaccag caaaacttgg aagtcgactt ctcgttcgaa ctgcccaacg
     2881 tcgcccgatt ccgcgtcaac gccttcaaca tcggccgcgg tcccgccgcc gtattccgca
     2941 ccattcccag caccgtctta tcgctggaag aattgaaagc cccgagcatt ttccaaaaaa
     3001 tcgcagaatc gccgcgcggc atggttttgg ttaccggccc taccggttcg ggcaaatcga
     3061 ccacgcttgc cgcaatgatc aactacatca acgaaaccca gccggcacac atcctgacca
     3121 tcgaagaccc gatcgaattc gtccaccaaa gcaaaaaatc cctgattaac cagcgcgagc
     3181 tgcaccagca caccctcagc ttcgccaacg cgctgcgttc cgcattgcgc gaagaccccg
     3241 acgttatcct tgtcggcgag atgcgcgacc cagaaaccat cggcttggcg ctgaccgccg
     3301 ccgaaaccgg acacttggtt ttcggcacgc tgcacacgac cggcgcagca aaaaccgtcg
     3361 accgtatcgt ggacgtattc ccagcgggag aaaaagaaat ggtgcgctct atgctgtccg
     3421 aatcgctgac cgccgtcatc tcccaaaacc tgctgaaaac gcacgacggc aacggccgtg
     3481 tcgcctcgca cgaaatcctg attgccaacc ccgccgtccg caacctcatc cgcgaaaaca
     3541 aaatcacgca gattaactcc gtcctacaaa ccgggcaggc gagcggtatg cagacaatgg
     3601 accaatcgct gcaatcgctg gtgcgccaag ggctgatcgc accggaagtc gcacgcagac
     3661 gcgcgcaaaa cagcgaaagt atgagtttct gacacacaac cgccttccgg ccataccgac
     3721 gggaaaacaa ggcgcaaaca cgcggggcgg gacgcagcat cccgcccggc tacctttccg
     3781 aacaagaagc gtccgccttc ctgttgaaac ctgccgccgc aaactgcaag gcttaaaccg
     3841 aaaagaagct aacgatgaat accgataacc tgcacgacat cttggacgaa atggttcaag
     3901 tgtattctca aaaaaaacaa agccgatccg aaaccccggc cgaaatcggc gcacacttcc
     3961 acccgctgct cgaccgcctg tgcgaaaccg cagaagcaca aaacgcgtcc gacatcctta
     4021 tcagcaaagg attcccgccc tcgttgaaaa tcaacagcgc attaaccccg cagccgcaaa
     4081 aggcgctgac gggcgaggaa accgccgcca tcgccgcatc gacgatgaac gccgaacaat
     4141 cggaaatatt ccggcgcgac ggcgaaatca actactccgt ccagtcgcgc agcggcacgc
     4201 gctaccgcgc caacgcctac cacagccaag gcagcgcagg tttggttttg cggcgcatca
     4261 accacgtcat cccgcaaatg caggaattgg gcctgcccga aaaactcaaa gacctcgccg
     4321 tcgcaccgcg cgggctgctg attatcgtcg ggcctaccgg ttcgggcaaa tccaccacga
     4381 tggcgactat gctcgaacac cgcaacaaaa ccctgcccag ccatatcgtt accatcgaag
     4441 acccgattga gtttatctac aaaccgcgcc gctgcatctt tacccagcgc gaaatcggcg
     4501 tcgacaccat aaactggcag acggcggtac aaaacgctat gcgccaatcc cccgacgtgg
     4561 tctgcatcgg cgaagtccgc agcagggaaa gtatggaata cgcgatgcag ctcgcccaaa
     4621 ccggccacct gtgcattttt acgctccacg ccaacaccgc gccgcagtcg ctcgaacgca
     4681 tactcaactt ctaccccaaa gaacagcaca accaaatact gatcgacatc gccctcaacc
     4741 tgaccggcat catctgccaa cgcctcgccc tcaaacaaga caaaacgggc aggacggcgg
     4801 ttgtcgactt gctcatcaac acgcccgcca tccaagactt catcctgaag ggcgacctga
     4861 tgaacatcag taaaatcatg gaaaccgcca aaaccgacgg aatgcagacg atggatcaaa
     4921 accttttcga actgtaccgt cacggcatca tcagttacga agaagccctg cgccagtccg
     4981 tttccgccaa caacctgcga ttgcacatcc aactgcacaa agaaggcaaa acgcccgaac
     5041 tcctttacga cagggtcaac ggtctcaacc tcatttcctg atccgcaaaa cccaatgccg
     5101 tctgaaaacc gcatccccgt tttcagacgg catgatttta tccgccccat tcatgtgcta
     5161 cact
//
LOCUS       DBBZXU010000124         4876 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.124, whole genome shotgun sequence.
ACCESSION   DBBZXU010000124 DBBZXU010000000
VERSION     DBBZXU010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4876)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4876)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4876
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.124"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(92..574)
                     /locus_tag="ACJJDE_001871"
     CDS             complement(92..574)
                     /locus_tag="ACJJDE_001871"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - fatty acyl-CoA hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HGG7541744.1"
                     /translation="MTQQRQLPSHELIMSELMMPDTANFSGNVHGGELLLLLDQVAYS
                     CASRYSGNYCVTLSVDKVLFKEPIHIGDLVTFYAAVNYTGRTSMEIGIRVEAQNIRTG
                     EIRHTNSCYFTMVAVKDGKPVPVPPLEILTDRQRCRYEKAKKRRDISLQASEDMSCGC
                     "
     gene            complement(727..888)
                     /locus_tag="ACJJDE_001872"
     CDS             complement(727..888)
                     /locus_tag="ACJJDE_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541745.1"
                     /translation="MSGQPEKHHTSPIEDERKNPVYRMGRAVAGFMLVVWVAVLALVF
                     FLVFRFWLS"
     gene            complement(962..1423)
                     /gene="recX"
                     /locus_tag="ACJJDE_001873"
     CDS             complement(962..1423)
                     /gene="recX"
                     /locus_tag="ACJJDE_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HGG7541746.1"
                     /translation="MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLN
                     EFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQQGIDEETSRNLLPDRSSEKQTA
                     IDVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC"
     gene            complement(1498..2208)
                     /locus_tag="ACJJDE_001874"
     CDS             complement(1498..2208)
                     /locus_tag="ACJJDE_001874"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008967 - phosphoglycolate phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HGG7541747.1"
                     /translation="MNAAIEHVQAVAFDLDGTLCDSVPDLAAAAEAMLEQLGMKPLPA
                     KVVESYVGDGIGKLVHRVLTNDRDREADSELWEKGFVSYMKYYRDHLSVFTRPYPETE
                     AGLALLKSLGIPLAVITNKNEILAVELLKQLGLADYFSLILGGDSLPEKKPSPLPLRH
                     AAEVLGIDVANMVMVGDSRNDIIAAKAAGCLSVGVTFGYGDMTLLSQDDATRPDWIIG
                     SLPEIYENLQPQKNKDEE"
     gene            2615..3880
                     /locus_tag="ACJJDE_001875"
     CDS             2615..3880
                     /locus_tag="ACJJDE_001875"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HGG7541748.1"
                     /translation="MSEALAKETLNPFEIARKQVKTACDRLKTDPAVYEILKSPTRVL
                     EVNFPVKLDDGTVKTFTGYRSQHNNAVGPYKGGVRFHPGVNLDEVKALSIWMTIKCCV
                     AGIPYGGGKGGVTLDPRDYSEAELERIARAYSEAISPLIGEKIDIPAPDVNTNGKIMS
                     WMVDAYENVVKHSAPGVFTGKPVEFGGSLARTEATGYGVNLAAVQALEKLGKDVKGAT
                     YAIQGFGNVGYHTGYYAHQSGAKVVAVSTVDVAIYNENGLDMEALFKEFQEKGFITNE
                     ASYGKEITNAELLALDVDVLAPCALENQLTSENAGKVRAKIVVEGANGPTTPEADVIL
                     RQNGVLVVPDILANCGGVVVSYFEWVQNLQGYYWEFDEVQEKETVVLRRAFRDIWNLA
                     QEYDVDLRTASYMMSIRRVEKAMKLRGWY"
     gene            complement(3937..4743)
                     /locus_tag="ACJJDE_001876"
     CDS             complement(3937..4743)
                     /locus_tag="ACJJDE_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HGG7541749.1"
                     /translation="MKKTLTLLAVSALFATSAHAHRVWVETAHTHGGEYLKADLGYGE
                     FPELEPIAKDRLHIFSKPMQLVTEKGKENMIQRGTYNYQYRSNRPVKDGSYLVIAEYQ
                     PTFWSKNKAGWKQAGIKEMPDASYCEQTRMFGKNIVNVGHESADTAIITKPVGQNLEI
                     VPLDNPANIHVGERFKVRVLFRGEPLPNATVTATFDGFDTSDRSKTHKTEAQAFSDST
                     DDKGEVDIIPLRQGFWKANVEHKADFPDQSVCQKQANYSTLTFQIGHSHH"
BASE COUNT         1050 a         1107 c         1435 g         1284 t
ORIGIN      
        1 aatttaatcc actatatttg cttgatttca tccgtttgca atggaaacgg atggcgcgat
       61 gtgcctgtct ttcagacggc atagtccgcc gtcagcagcc gcaggacatg tcttcagagg
      121 cttgcaggct gatgtctctg cgttttttgg ctttttcgta gcggcagcgt tggcggtcgg
      181 tcaggatttc cagcggaggg acagggacgg gtttgccgtc tttgaccgca accatcgtga
      241 agtagcagct gttggtgtgg cggatttcgc cggtgcggat gttttgtgct tcgacacgga
      301 tgccgatttc catcgaggtg cgtcccgtgt agttgacagc ggcgtaaaag gtaaccaaat
      361 cgccgatgtg gatgggttct ttaaacagga ctttgtcaac cgacagggta acgcaataat
      421 tgccgctgta acggctggcg caggaatagg cgacttggtc gagcaggagc aggagttcgc
      481 cgccgtgtac gttgccgctg aaattggcgg tgtccggcat catcagttcg gacataatga
      541 gttcgtggga aggcagttgg cgttgttgtg tcatggtgta cctgttttaa gaaagggtgt
      601 tttgaaatgg gtgcggggaa attttaggga atggggaagt ggaattcaag ctaaaaaaag
      661 ctatgatggg atagtctgcc gaaatggacc gccgatgccg tctgaagcct tcagacggca
      721 ttttgtttag gaaagccaaa aacggaagac caggaaaaac acgagtgcca atacggcgac
      781 ccaaacgacg agcatgaatc cggcaactgc ccgtcccata cggtaaaccg ggtttttgcg
      841 ttcgtcttcg atgggggagg tgtggtgttt ttcgggttgt ccggacattt tgttctcaat
      901 cggaaaagtt ggaaacgggc gtaaggttat gttgccgtgc aaaaagattc aagaaggaag
      961 gtcagcagcc gtcttcccaa ttttcgtccc aagcgtgttt caatgccgtc tgaacggtat
     1021 cggcatcgaa tccgcgatag gcgaggaaac gcgcctgttt ttgtttttct ttaaggtcgg
     1081 cggcggggtg tttgaatttt ttacgcaaca cgtctatggc ggtctgtttt tcgcttgagc
     1141 ggtcgggaag caggttgcgg ctggtttctt catctatgcc ctgttgcgcc aaagcctgtt
     1201 tcagcctcaa tgaaccgtgt ttgcggcttt tgctgcggat ataggcttcg gcatagcgca
     1261 aatccgactg ccagttgcgt tcggcaaatt cgtttaacac gttttccaac tcttcttcgc
     1321 tttcggcgtg cggtgcaagt ttgcgtttca gaccgatgcg gctgacttct tggcgcgaga
     1381 ggatgtccat cgcgcgggcg cgtagggatt tttgcggttt catggcggcg gtttcggcgt
     1441 ggggcaggtt tcagacggca tgggaaacgg attccgatgc cgtctgaaca gattgtttta
     1501 ttcttcgtct ttatttttct gcggttgcag gttttcgtaa atttcgggca gcgagccgat
     1561 aatccagtcg gggcgggtcg catcgtcttg cgagagcagc gtcatatcgc cgtaaccgaa
     1621 ggtaacgccg acgctcaggc agccggcggc tttggcggcg atgatgtcgt tgcgcgagtc
     1681 gccgaccata accatgtttg caacatcgat acccaaaact tcggcggcat gccgcagcgg
     1741 cagggggctg ggttttttct cgggcaggct gtcgccgccg agtatcaggc tgaagtagtc
     1801 ggcaagtccg agctgtttca acagttcgac ggcaaggatt tcgtttttgt tggtaatgac
     1861 tgccagcggg atgcccaaag atttgagcaa tgccagcccg gcttcggttt cgggataggg
     1921 gcgggtgaag acgctcaaat ggtcgcggta gtatttcata taggatacga aacctttttc
     1981 ccacagttcg gaatcggctt cgcggtcgcg gtcgttggtg aggacgcggt gaaccagttt
     2041 gccgatgccg tcgcccacat agctttcgac cacttttgca ggcagcggtt tcataccgag
     2101 ttgctccaac atcgcttctg cggcggcggc aaggtcgggg acggaatcgc acagtgtgcc
     2161 gtccaaatcg aaggcgacgg cttggacgtg ttcgatggct gcattcataa tctgatttcc
     2221 tgtcgggttg aaagggttta ttttaacatc gtttgcacag ggcttctaat gtatagattg
     2281 ttaacaatcg caacaggttt tgcaggcggt gttttcggat ttcggggcgg aatcgggcaa
     2341 gggtttgaaa tcccggcgat gttccaatta aatttttaaa aaataaaagg atgcctatat
     2401 ctttatttaa tttgacattt atttttcgga cgcgcgcgct gctttttcag gcggagtccg
     2461 ggctgattcc gtgcggcttg aaaaataaaa tcatatatag attaatcaaa tcgggcttat
     2521 gccgactaca cgctattaca ttttgtcggg aaattggtta tagtaatgag cgaaatgcac
     2581 gcccctgaaa atctttttgt gaaaaggaag caaaatgtct gaagcccttg caaaagaaac
     2641 cctcaatccg tttgaaatcg cgcgcaaaca ggtcaaaacc gcctgcgacc ggctgaaaac
     2701 cgatccggcc gtttatgaaa tcctgaagag tccgacccgc gtgttggaag tcaatttccc
     2761 cgtcaaactc gacgacggca cggtcaaaac cttcacgggc taccgttcgc aacacaacaa
     2821 cgccgtcggc ccctataaag gcggcgtgcg cttccatccc ggtgtgaatc tggacgaagt
     2881 caaagccctg tcaatttgga tgaccatcaa atgctgcgtg gccggcattc cttacggcgg
     2941 cggcaaaggc ggcgttacct tggatccgcg cgattattcc gaggcggaac tggaacgcat
     3001 cgcccgcgct tattccgaag ccatttctcc gctcatcggc gaaaaaatcg atattcccgc
     3061 ccccgatgtg aataccaacg gcaaaattat gtcgtggatg gtggatgctt atgaaaacgt
     3121 ggtgaaacat tccgcgccgg gcgtatttac cggaaaaccg gttgagttcg gcggctcttt
     3181 ggcgcgtacc gaggctaccg gttacggcgt gaacctcgcc gccgtccaag ctttggaaaa
     3241 actgggcaag gacgtgaaag gcgcgactta cgccatccaa ggcttcggta atgtcggtta
     3301 ccacacaggt tattacgcgc atcaatccgg cgcgaaagtt gttgcggttt ctactgttga
     3361 cgttgccatc tacaatgaaa atggcttgga tatggaagcc ctgtttaaag agttccaaga
     3421 aaaaggcttc atcaccaacg aagccagtta cggcaaagaa attaccaacg ccgaactttt
     3481 ggctttggat gtggacgtac tcgccccttg cgcgttggaa aaccaactga cttccgaaaa
     3541 cgccggtaaa gtccgcgcga aaatcgtggt cgaaggcgcg aacggcccga ctacgcccga
     3601 agccgacgtt atcctgcgtc aaaacggcgt attggtcgtg cctgatattt tggcgaactg
     3661 cggcggcgtg gtggtatctt attttgaatg ggtacaaaat ctgcaaggct actactggga
     3721 gtttgacgaa gttcaggaaa aagaaaccgt cgtcctgcgc cgtgcgttcc gcgatatatg
     3781 gaacttggcg caagagtatg atgtcgattt gcgaaccgcg tcttacatga tgagtatccg
     3841 ccgtgttgaa aaagcgatga aactgcgcgg ttggtattga tgtttgaaca aaaaatgccg
     3901 tctgaagcct tcagacggca ttttgtgcgg gcgggattaa tggtgcgaat ggccgatttg
     3961 gaaggttaaa gtcgagtagt tcgcctgttt ttggcacacg ctttgatcgg ggaagtcggc
     4021 tttgtgttcg acattggctt tccagaagcc ttggcgcaag gggatgatgt ccacttcgcc
     4081 tttgtcgtct gtgctgtcgg agaaagcctg tgcttcggtt ttgtgcgttt tgctgcggtc
     4141 gctggtgtcg aagccgtcaa aggtggcggt aacggtggca ttgggcagcg gttcgccacg
     4201 gaacagaacg cggactttga agcgttcgcc tacgtgaatg ttggcgggat tgtccagcgg
     4261 gacgatttcc aagttttgtc cgaccggttt ggtgatgatg gcggtgtccg cgctttcgtg
     4321 tccgacgttg acgatgtttt tgccgaacat tcgggtttgt tcgcaatagc ttgcgtcagg
     4381 catttctttg atgcccgcct gtttccagcc tgctttgttt tttgaccaga aagtaggctg
     4441 atattcggcg atgacgaggt aactgccgtc cttaacggga cggttgcttc ggtactggta
     4501 gttgtatgtg ccgcgttgaa tcatgttttc cttgcctttt tcggtaacca gctgcatcgg
     4561 tttgctgaag atgtgcaggc ggtctttggc gatgggttcg agttcgggaa attcgccgta
     4621 gcccaagtcg gctttaaggt attcgccgcc gtgcgtgtgg gcggtttcga cccagacgcg
     4681 gtgggcgtgg gcggatgtgg caaatagggc ggaaacggcg agcagtgtca atgttttctt
     4741 catggtgcag cctttgtctc gtgtgggtta aagattttgt tatgttataa caaaataggt
     4801 atcgtgtgaa gacggatttg ctgtctgaaa actgtctttt tgtatagtgg attaacaaaa
     4861 accagtacgg cgttgc
//
LOCUS       DBBZXU010000125         4749 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.125, whole genome shotgun sequence.
ACCESSION   DBBZXU010000125 DBBZXU010000000
VERSION     DBBZXU010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4749)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4749)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4749
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.125"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..369
                     /locus_tag="ACJJDE_001877"
     CDS             <1..369
                     /locus_tag="ACJJDE_001877"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541750.1"
                     /translation="GYDLSFGIRNIIIFFVKGIYTEDDSKPAGKKRPLLNCTPKVGHL
                     TDFRGCSFLWQNIQMNSDLPSFNTIWQGTADHLSISDSLVRRWVTKYRLHGESGIKRR
                     KHTTKYSVEYKLEAIRLVTG"
     gene            373..486
                     /locus_tag="ACJJDE_001878"
     CDS             373..486
                     /locus_tag="ACJJDE_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HGG7541751.1"
                     /translation="MSQKAAADQLNLPDCSILLQWLRLYHLNGINGLKPKP"
     gene            806..1063
                     /locus_tag="ACJJDE_001879"
                     /pseudo
     CDS             806..1063
                     /locus_tag="ACJJDE_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611698.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1116..1298)
                     /locus_tag="ACJJDE_001880"
     CDS             complement(1116..1298)
                     /locus_tag="ACJJDE_001880"
                     /inference="COORDINATES: protein motif:HMM:NF024728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7541752.1"
                     /translation="MKYTIFFSTSHHSNQTKATHRHTHVGSTAGQTTIRSGGDTTLKG
                     AQLIGIGIQADPQLQP"
     gene            complement(1449..2399)
                     /locus_tag="ACJJDE_001881"
     CDS             complement(1449..2399)
                     /locus_tag="ACJJDE_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HGG7541753.1"
                     /translation="MYLGIDVSKLTIDCCLIVDGQNYQKKFQNNKGGFEQLINWLQSH
                     KVNDKLHCVCEATGTYYEALAEYLYSRYTITVENPRKIKGYAIAELQRSKTDTQDAKL
                     IAQYCQDRKHKLKAWKPPTKEQKQLQEIARYLDYLKQQRATEKAKQHEAPDYIKSHIQ
                     TTISNLTAQIQIVKKQLLQFYKDNPSYNNLRKRLKTITGIGEQATAVLLSTYKRHEFK
                     NARQFTAYLGLDPRKFQSGTSVNGKSRISKIGSSEIRKSLYMPALVAYRCNAFPEFVG
                     RLKNKGKHIKLILIAIMRKLAVIAFTILQNGQDFQVERYK"
     gene            complement(3025..4110)
                     /locus_tag="ACJJDE_001882"
     CDS             complement(3025..4110)
                     /locus_tag="ACJJDE_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin domain-containing
                     protein"
                     /protein_id="HGG7541754.1"
                     /translation="MIYLFTGNMGTGKTSRVVSMILNNEDGLFKMKLEDGTEVDRPLY
                     FCHIDGLDKRQFKAHELTEEQIMSAPLRDVIPEGAVLIVDEAHYTYPVRAAGRPVPPY
                     IQELTELRHHGHTVILMTQHPSQLDIFVRNLVSKHVHLERKAIGMKQYYWYKCVTSLD
                     NPAGVSGVEVASWKPPKEAFKYYKSASQHQKFKKKVPWAVWALIAIVGFVGWKSYGIF
                     KVYSKATDSRIEQEAQKESVVQTMTEQPASSEEMPLKNSDNLKPEDFVPTLPEKPESK
                     PIYNTVRQVKTFEQIAGCIDGGKSDCTCYSNQGTPLKEITKIMCKEYVKNGLPFNPYK
                     DEQQRTEQVEQSAKADKPQVLVMGGKP"
     gene            complement(4120..4410)
                     /locus_tag="ACJJDE_001883"
     CDS             complement(4120..4410)
                     /locus_tag="ACJJDE_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HGG7541755.1"
                     /translation="MPLLAGLIPLLGILLKMLIVRIILATGLTFVTYAGYLIALEKFK
                     DYTSNAINSMPSDILNLLLISGFGQGLGYLFGAFSFFIGMHAFKKLTFVFPG"
     gene            complement(4411..>4749)
                     /locus_tag="ACJJDE_001884"
     CDS             complement(4411..>4749)
                     /locus_tag="ACJJDE_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7541756.1"
                     /translation="RHRKERKEGEDGGLLCDYFPEILACQEMGKPSDGMFHDISIPQV
                     IDDKTWSSHNFLPSNGVCPQPKTFHVFGRQYQASYEPLCVFAEKIRFAVLLAFIIMSA
                     FVVFGSLKGK"
BASE COUNT         1182 a         1038 c         1037 g         1492 t
ORIGIN      
        1 ggatacgacc ttagttttgg tatccgtaat atcatcattt ttttcgtcaa gggaatatac
       61 acggaggatg attcaaaacc ggcaggcaaa aaaagaccgc ttctgaactg caccccaaaa
      121 gttggacacc ttaccgactt tagggggtgc agttttttat ggcaaaatat tcagatgaat
      181 tccgacttgc cgtcgttcaa tactatttgg cagggaacag cagaccatct ttctatttcc
      241 gattcattgg tacgcagatg ggtgacaaaa tacagattac acggagagag tggcatcaaa
      301 cgtagaaagc atacgacaaa atattcggtc gaatacaaac ttgaggcaat ccgcctggtg
      361 acggggtagg gaatgtccca aaaagctgcc gcagaccaac tgaatttgcc cgactgctcc
      421 atcttgctgc aatggttgcg cctctaccat ttgaatggta ttaacggttt aaagcccaaa
      481 ccctaaaccc aaaggaagaa agcccgtgaa aaaacagcat ccgccggaaa cgaaaaagcc
      541 gactatctga aaaccaagga agaactgctt gcggaattgg cttgccttaa agcggaaatg
      601 gctgccctaa aaaagctcga tgccttaatc tatgggaaag aagtgcggta gaaagaacgc
      661 aactcgtcgc agggttaagg caatgccatc cgttgaactg ctgttggtga ttgtcggact
      721 gccacgcggc accttctatt accaattggt tgtccaatcg gcagaagaca aatatgccga
      781 tttgaaacgg catatccatg atatttatca aaagcagttg aaagacaacg gtctggttca
      841 gagtatgtcc cgcaagggaa actgcttgga caatgcggca atggaaagtt tcttcggaac
      901 gttgaaatcg gaatgtttcc atacgtgcaa atatgattcc gttaccgaat tggaagctgt
      961 actgcacgaa tatatccgtt actacaacaa cgatagaatc aagttgaaat taaaaggact
     1021 gagccctgtt cagtacagaa ttcagtccct gaaagccgct tgattaaact gtccaacttt
     1081 tgggggtcag ttaatatcgg ttccaccaat agtcgtcagg gttgtagttg ggggtctgcc
     1141 tgtatgccta tgccgataag ctgagcacct ttgagggtgg tatccccgcc gcttcggatg
     1201 gtggtttgtc cggccgtact gccgacatgg gtgtggcggt gggttgcttt tgtctgattg
     1261 ctgtggtggc ttgttgaaaa aaagatagtg tatttcacgg tcaaataact ttacatttct
     1321 tgaagttgca agaatgcgca ccccgacttt ttcgggatgt ttgtttcgtt ttgaatggat
     1381 ttgatgtttt aatttatact ttattttcaa taaattgaaa atcaccggcg aaagcccagt
     1441 ttaatttttt atttatatct ttccacttgg aaatcttggc cgttttgcaa aatcgtaaac
     1501 gctattaccg ccagtttccg catgatggca attaatatca attttatatg cttcccttta
     1561 tttttcagac gccctacaaa ttcagggaag gcattacaac gatatgcaac aagtgcaggc
     1621 atataaaggc ttttccttat ttccgaactt cctatttttg atattctgct ttttccgttc
     1681 acgcttgttc ctgattgaaa ttttctaggg tctaggccta gataagccgt gaactgtctt
     1741 gcatttttaa attcatgtct tttataggtt gatagcaata ctgctgtcgc ttgctcgcct
     1801 atgcctgtta ttgttttcag ccttttgcgt agattgttat aacttggatt gtctttgtag
     1861 aactggagta attgcttttt gactatctgt atttgtgctg tcaggtttga aatagttgtt
     1921 tgaatatggg atttgatata gtcgggtgct tcgtgttgtt tagctttttc tgttgcgcgt
     1981 tgctgtttca gatagtctaa atatcgggcg atttcctgta attgcttctg ttcttttgtc
     2041 ggcggtttcc atgcttttaa tttgtgcttt cggtcttggc aatattgggc tatcaacttt
     2101 gcgtcttgtg tatctgtttt tgatcgttgt agttctgcta tcgcatatcc ttttatcttt
     2161 cgtggattct ctacggtaat tgtatatctt gaataaagat attcggctaa tgcttcgtaa
     2221 tatgtgcctg ttgcttcgca cacgcaatgg agcttatcgt ttactttatg actttgtagc
     2281 caatttatta attgttcaaa tcctcctttg ttgttctgaa acttcttttg ataattttga
     2341 ccgtctacaa tcaaacagca atctattgtg agctttgaaa cgtctattcc taagtacatg
     2401 gtttaacctt attaattcgg gctttttgcc ctagatagtg ttcaaactta agatgtacga
     2461 aagcccacgc ttctatcttt cttacaagct gtacgctttg gccgtacttt cgaagtcgtg
     2521 ggctttactt ggtgtttcgt caaacgccaa gccctcaatg ggctgattta ctcattcagg
     2581 gcttgaagct tatcgccttt gccgtatctg attttattgg ggtcgcaggt tttggtaaag
     2641 gtttctgttg cgacccgaat gtctgatttt ttttgggcgt atctcagtct ggaatcactc
     2701 cgttcggggg tttccggtat tgaaaaacag ttcataaaaa aggaaaaggg ggtattcata
     2761 aagattgggt aaaaagcgcg cccaatcttt acaaagcttc ccccttttcc ttttttctgc
     2821 cctattttcc tgcacctaca acccccgaac gaagcgattc cagactgaga cactttaaaa
     2881 aaaacagcca ttctagcaat taaccccctt cactcagctc aagccatcct gaggggtagg
     2941 gattgaactt tctgctttac gactccgccg ccaattcctt caaacggttt tccgcgctct
     3001 tcagttgtcg tacatgagat tttgctacgg ctttccgccc attacgagaa cttgcggctt
     3061 gtccgctttc gcggactgtt ccacctgttc cgtcctttgc tgttcgtcct tataaggatt
     3121 gaaaggcaac ccgtttttca catattcttt acacattatc tttgttattt ctttcaaggg
     3181 tgttccttga tttgaatagc atgtgcaatc tgattttccg ccgtctatac atccggcgat
     3241 ttgctcaaag gtttttactt gtcggactgt gttataaata ggcttgcttt cgggcttttc
     3301 gggtaaagtc ggcacaaagt cttcaggttt caaattgtct gaatttttta aaggcatttc
     3361 ctctgatgat gcaggctgct ccgtcatcgt ctgcacaacg ctttcttttt gcgcttcctg
     3421 ctcaatccgg ctgtctgtgg ctttgctgta aactttaaaa atgccgtaac ttttccagcc
     3481 tacaaaccct acaatcgcaa tcaacgccca aaccgcccaa ggtacttttt tcttgaactt
     3541 ttggtgctgg cttgctgatt tatagtattt aaaggcttct ttcggcggtt tccaacttgc
     3601 gacttctacg ccgcttacgc ctgcgggatt gtccaacgag gttacgcatt tataccaata
     3661 atactgtttc attccgattg ccttgcgttc aaggtgtaca tgctttgaaa caaggttgcg
     3721 gacgaatata tcaagttggc tcgggtgctg cgtcatcaaa ataacggtat gcccgtgatg
     3781 gcggagttct gtcagttcct gaatataagg cggaacggga cggcctgccg cgcgtaccgg
     3841 ataagtgtag tgcgcttcgt caacaatcag cactgcgcct tccggtatga catcacgaag
     3901 cggggcggac atgatttgct cttccgtcag ttcgtgggct ttaaactgcc gtttatccaa
     3961 tccgtcgata tggcagaaat aaagcggtct gtctacctct gtgccgtctt ccaatttcat
     4021 tttgaacaat ccgtcttcgt tgttcaaaat catagagacg acgcgggagg ttttgcctgt
     4081 ccccatgttt cctgtaaaca gataaatcat gcttctacct catcctggaa agacaaacgt
     4141 cagttttttg aatgcgtgca taccaatgaa gaacgagaat gcgccgaaca ggtagcccaa
     4201 cccctgaccg aatcccgaaa ttaaaagaag gttcagtatg tcggaaggca tggaattgat
     4261 cgcatttgac gtgtagtctt tgaacttttc cagcgcgatg agatacccgg cataggttac
     4321 aaatgtcaga cctgttgcaa ggattattct gacaatcagc attttcagaa gtatgcctaa
     4381 aagtggaatc agaccggcaa gtaatggcat ttatttcccc ttcaacgaac cgaaaacgac
     4441 aaaagccgac ataatgataa aggcgagcag tacggcaaaa cggatttttt cggcaaacac
     4501 gcataacggc tcatagcttg cctgatattg cctaccgaaa acatgaaagg ttttcggctg
     4561 cggacatacg ccgttagacg gtaaaaagtt atgtgaagac catgttttat cgtctataac
     4621 ctgcggtatg cttatatcgt gaaacatgcc gtctgaaggt ttgcccatct cctgacaggc
     4681 taggatttcc ggaaaataat cgcacaaaag cccgccgtct tcgccttctt tcctttcttt
     4741 gcgatgcct
//
LOCUS       DBBZXU010000126         4734 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.126, whole genome shotgun sequence.
ACCESSION   DBBZXU010000126 DBBZXU010000000
VERSION     DBBZXU010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4734
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.126"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(418..954)
                     /locus_tag="ACJJDE_001885"
     CDS             complement(418..954)
                     /locus_tag="ACJJDE_001885"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HGG7541757.1"
                     /translation="MDLREVKLGGETIYEGGFVSISRDKVRLPNGNEGQRIVIRHPGA
                     ACVLAVTDDEKVVLVRQWRYAANQATLELPAGKLDVAGEDMAACALRELAEETPYVAD
                     SVRLLYSFYTAVGFCNEKMYLFEAEGVRLGSTLANDEDEITETVLMSKEEVRQALAND
                     EIKDGKTLIGLQYWLMKD"
     gene            complement(988..1344)
                     /gene="folB"
                     /locus_tag="ACJJDE_001886"
     CDS             complement(988..1344)
                     /gene="folB"
                     /locus_tag="ACJJDE_001886"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HGG7541758.1"
                     /translation="MDKIFLHGIKADTLIGVYGWERERLQTLIVDLDIGVPEKAGSDD
                     DIANTVHYAEVCETLRRHLKEQDFLLLEALAEYIADLVLGYFGAVWVRVKIVKPGILE
                     GVREVGVEIERGKRED"
     gene            1400..2002
                     /gene="plsY"
                     /locus_tag="ACJJDE_001887"
     CDS             1400..2002
                     /gene="plsY"
                     /locus_tag="ACJJDE_001887"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HGG7541759.1"
                     /translation="MFNIPAVAVSYLIGSLSFAVIVSKYYGMDDPRTYGSGNPGATNV
                     LRSGKKKAAALTLLGDAAKGLVAVLLARVLQEPLGLSDSAIAAVALAALVGHMWPVFF
                     GFKGGKGVATALGVLLALSPATALVCALVWLVMAFGFKVSSLAALTATIAAPLAALFF
                     MPHTSWIFATLAIAILVLLRHKSNIVKLLEGRESKIGGSR"
     gene            2079..2924
                     /locus_tag="ACJJDE_001888"
     CDS             2079..2924
                     /locus_tag="ACJJDE_001888"
                     /EC_number="2.1.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008988 - rRNA
                     (adenine-N6-)-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HGG7541760.1"
                     /translation="MLSYRHAFHAGNHADMLKHFTLFLVLQYFNRKDKPYWYIDTHGG
                     AGVYNLEGSEAQKVGEYRQGIALLRQAKNLPTELNGFIAHIQKILPSPELYCGSPWLA
                     QSLTRVGDKLRLFELHPTDFVHLQNNMGEAGLGKRGQVLREDGYKGLISLLPPPPRRA
                     TVLIDPPYEEKQDYRHVTETLKAALKRFESGCYLIWYPCLSREESRKLPEELKKLLPD
                     NYLHAELHVHAPKADGFGMHGSGMFVINPPYLLAEQLAANLPALTRLLAQDEGARYLL
                     DSKIR"
     gene            3170..4144
                     /locus_tag="ACJJDE_001889"
     CDS             3170..4144
                     /locus_tag="ACJJDE_001889"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HGG7541761.1"
                     /translation="MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGAL
                     AGVLGMAGTGNIQGEDQKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGENGRY
                     LVLFDPLDGSSNIDVNISVGTIFSILEKPEGALATESFLQTGRQQLAAGYILYGPQTQ
                     LVFTFGHGVYMFTLNAENEFVLTKEKPKVPESTKEFAINMSNRRHWLPPVQQYIDELL
                     AGETGTRGKNYNMRWVASMVAEIHRILMRGGVFMYPQDKRDPSKPGKLRLMYEANPMS
                     LILEQAGASASNAYQAMLDIQPENLHQRVAVFMGSSEEVAYLDRLHAK"
     gene            complement(4287..4505)
                     /locus_tag="ACJJDE_001890"
     CDS             complement(4287..4505)
                     /locus_tag="ACJJDE_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HGG7541762.1"
                     /translation="MFPEYRDLISKLKQENSRFARLFDEHNELDDKITGLVNNPVTSG
                     AETIDELKKAKLKLKDELYAILQKAAGK"
BASE COUNT         1224 a         1411 c          996 g         1103 t
ORIGIN      
        1 ttctcaaatt caaattgggc ttttaggtct ataacaaaga aaaagccttg gtaggataaa
       61 cctaccaagg ctttttctta aaaaaacgct ctattaccgt gcctaaaaat gcaaaaaagt
      121 aaccgtcata acccttttgc caaaatcaat atcatcatcc gatgaatgaa ttgacggtat
      181 ataagaaaga attaataagc tcataaaccg gtaagaaaaa tcagtaacaa agatattcat
      241 tattaaccat tttaaaaatt atcatgttcg tttgggtaat tattataccc ttttccctct
      301 tattactaaa gcacgaatga ctttaaagga cgcgcccaga gacaagccga aaaggcatat
      361 ctcatccgcc aaacaaaatg cccaccgact tactccggca ggcagttcaa caccctgtca
      421 atccttcatc agccagtatt gcaaaccgat taatgtcttg ccgtctttaa tttcatcgtt
      481 tgctaatgcc tgacggactt cttctttcga catcaatacg gtttccgtaa tctcgtcttc
      541 gtcattggca agcgtactgc ccaaacgcac gccttccgct tcgaacagat acattttttc
      601 gttgcaaaaa ccgaccgccg tataaaaact gtaaagcagg cgcacgctgt cggcaacata
      661 aggcgtttct tcagccagtt ctctcagcgc acacgctgcc atatcctcgc ccgccacatc
      721 cagcttgccc gcaggaagtt ccaatgtcgc ctgatttgcc gcataccgcc actgccgtac
      781 caaaacgacc ttttcatcat ccgttaccgc caacacgcac gccgctcccg gatgacggat
      841 gacgatacgc tgcccttcat tgccgttggg caacctgacc ttatccctgc tgatgctgac
      901 aaaaccgccc tcgtaaatgg tttcgccgcc taattttact tccctcaaat ccacttcata
      961 tctcctttcc gtttcctatt ctgccgttca atcttcacgc ttgccgcgct cgatttccac
     1021 gccaacctcg cgcacgcctt ccaaaatacc cggcttgacg attttcacgc gtacccacac
     1081 cgcgccgaaa tatcccaaaa ccaaatcggc aatatattcc gccaacgctt ccaaaagcag
     1141 gaaatcctgt tctttcagat gtcggcgcag tgtttcgcat acctcggcat aatgtaccgt
     1201 attggcaata tcgtcgtccg aacccgcttt ctcgggaacg ccgatgtcca aatcgacaat
     1261 cagggtctgc aaccgttcgc gttcccagcc gtacacgccg ataagcgtat ccgccttgat
     1321 gccgtgcaaa aagattttat ccataatccg ccccgttttt tgctaaaata accgcaccat
     1381 tctaagtaaa gtaccacaaa tgttcaacat accggctgtt gccgtttcct atctgatcgg
     1441 ctcactttct ttcgccgtca tcgtttccaa gtattacggg atggacgacc cgcgcaccta
     1501 cggatcgggc aatcctgggg cgaccaatgt tttacgcagc ggcaaaaaaa aggcggccgc
     1561 gctgacgctc ttgggcgatg ccgccaaagg tttagttgcc gttttgcttg cacgcgtgct
     1621 tcaagaaccg ctcggtttat ccgacagcgc aatcgctgcc gtcgcactcg ccgcgctggt
     1681 cgggcatatg tggccggtgt ttttcggatt taagggcggc aaaggcgtgg caacggcatt
     1741 gggcgtgctt ctggcactct ctcccgcaac tgccttggtc tgcgcgttgg tttggcttgt
     1801 tatggcattc ggcttcaagg tgtcctccct tgccgcatta accgccacaa tcgccgcccc
     1861 ccttgccgca ctgtttttta tgccgcatac ttcttggatt ttcgcaaccc tcgcaatcgc
     1921 catattggtg ttgctccgcc acaaaagtaa tatcgtcaag ctgctcgaag gcagagaaag
     1981 caaaatcggc ggcagccgct gatttcccat ccatccctgt ttatgccgtc tgaaccccgc
     2041 ttcagacggc atccgaatat cccgccgttt taccgactat gctcagttac agacacgcat
     2101 tccacgccgg caaccacgcc gatatgctca aacacttcac cttgttttta gtgctgcaat
     2161 atttcaaccg caaagacaag ccctactggt acatcgacac gcacggcggc gcgggtgtgt
     2221 acaatctcga aggcagcgag gcacaaaaag tcggcgaata ccggcaaggc atcgccctac
     2281 ttcgacaagc aaaaaacctg ccaaccgagt taaacggctt tatcgcgcac atacaaaaaa
     2341 tcctgccctc gcccgaactt tactgcggtt ctccgtggct ggcgcaatcg ctgacccgcg
     2401 tcggcgacaa attacgcctg tttgagctgc accccaccga ctttgtccat ctgcaaaaca
     2461 atatgggcga agcaggattg ggcaaacgcg gacaagtgtt gcgcgaagac ggttacaaag
     2521 ggctgatttc cctgctgccg cccccgccgc gccgcgccac cgtcctcatc gacccgccct
     2581 atgaggaaaa acaggactac cggcatgtaa cggaaacgct gaaagccgct ttaaaacggt
     2641 ttgagtccgg ctgttatctc atttggtatc cctgcctcag ccgcgaagaa agccgcaagc
     2701 tgcccgaaga attgaaaaaa ctcctgcccg acaactacct tcacgccgaa cttcacgtcc
     2761 acgcgccgaa agccgacggt ttcggtatgc acggcagcgg aatgttcgtc atcaatccgc
     2821 cctatctgtt ggcggaacaa ttggcggcaa acctccccgc cctgacgcgg ctgctggcgc
     2881 aagacgaagg cgcgcgctac cttttggaca gcaaaatccg ctgaccccga tgccgtctga
     2941 aacccttcag acaacatctc ccgtcaaata aacaaaaccg gacgatatac cggcagtcgg
     3001 cacttttaag aataaatatc ccctcatccg cctgccgcgt tccgacttgc cccatgccgt
     3061 ttttttacac tacaatcccc tagactatcc tgcaaaacgc accaaaggaa tacgccacaa
     3121 taacctgccg cccttcagac ggcacaaacc tttccgaaac gagcaaacta tggacacact
     3181 gacccgattc ctccccgaac acctgcaaca aaaccagctg cccgaagcac tcggcggcgt
     3241 tttactgtcc gttgtttccg cctgcaccga aatcaacgcc aaagtccgcc tcggcgcact
     3301 ggccggcgta ttgggtatgg cgggcacggg caatattcag ggcgaagacc aaaaaaaact
     3361 ggatgttatc gccaacaaca tcatgattga cacactcaaa gccaaccctg ccgttgccgg
     3421 tttggcaagc gaggaagaag actctttcgt aagtgccggt gaaaacggac gctatctcgt
     3481 cctattcgac cctttagacg gatcgtccaa tattgatgtc aacatttccg tcggtacaat
     3541 tttctccatc cttgaaaaac ccgaaggcgc attggcaacc gaatcattcc ttcaaacggg
     3601 cagacagcag cttgccgcag gctatatcct ctacgggcct caaacccagc tcgtattcac
     3661 attcggacac ggcgtatata tgttcacgct caatgccgaa aacgaatttg tgctgaccaa
     3721 agaaaaaccg aaagtacccg aaagtaccaa agaatttgcc atcaatatgt ccaaccgccg
     3781 ccactggctg ccccccgtcc aacaatacat cgacgagctc ttggcgggcg aaaccggcac
     3841 gcgcggcaaa aactacaata tgcgctgggt agccagcatg gttgccgaaa tccaccgcat
     3901 cctgatgcgc ggcggcgtgt tcatgtatcc gcaagacaaa cgcgacccgt ccaaacccgg
     3961 caaactgcgc ctgatgtacg aagccaaccc tatgagcctg atactcgaac aggcgggcgc
     4021 atcggcaagc aacgcatatc aagccatgct cgacatacag cccgaaaacc tgcaccaacg
     4081 cgtcgccgtc ttcatgggca gcagcgaaga agtcgcctat ctcgaccgcc tgcacgcaaa
     4141 atagacagac agccgttcac acaagtacac ggcggcggca atccgatacc gccgccgtta
     4201 tttcaaacag cacaagcctt ctggtcaaat gacaaaaatg ccgtctgaaa acatttcaga
     4261 cggcatttca aaaactcaaa cccgaattat tttcccgctg ctttttgcag gatggcgtac
     4321 aactcgtctt tcagtttcaa tttggctttt ttcagctcat cgatggtttc cgcaccgctg
     4381 gtaaccggat tgttgaccag accggtaatt ttatcgtcca gctcgttgtg ttcgtcgaac
     4441 agacgggcga agcgggaatt ttcctgtttc aatttggaaa tcaaatcacg gtattctggg
     4501 aacatatcgc tttcctctct tggtttacgg ttaaaaagtc aaactgaatc tttacattaa
     4561 ttataacaaa gataatattt ttatccagtg ttttatcgga tacggcaaaa ttttctttta
     4621 acaccgccgt ccggttgata aaaacgttga caatatcacg ctttacgcat aaattttcag
     4681 cctttcctac tgtatagtgg attaacaaaa atcaggacaa ggcgacgaag ccgc
//
LOCUS       DBBZXU010000127         4650 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.127, whole genome shotgun sequence.
ACCESSION   DBBZXU010000127 DBBZXU010000000
VERSION     DBBZXU010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4650)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4650)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4650
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.127"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            110..1051
                     /gene="miaA"
                     /locus_tag="ACJJDE_001891"
     CDS             110..1051
                     /gene="miaA"
                     /locus_tag="ACJJDE_001891"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HGG7541763.1"
                     /translation="MPTPKAFALLGPTACGKTALALKIAETLPVEIISLDSALVYRDM
                     DIGTAKPSHAERSFVPHHLIDIITPVQTYSAARFVEDCTRLIGEITARGKYPLIVGGT
                     MMYFRALTQGLNDLPEADACLRADLDEQKQMYGLDFLYRTLQKVDPETACRLKPNDSQ
                     RIGRALEVYYLTGKPMSTHLGSPTSHTLPFDLHTAALIPENRARLHENIALRFHLMLE
                     QGFIGEVENLRRLYPSLTADSPAIRCVGYRQAWEYLDGKTDFPAFVEKGIAATRQLAK
                     RQLTWLRKTPLDCVTDPFSDGNSCTRLIEAAKRFFGA"
     gene            1055..1774
                     /gene="tadA"
                     /locus_tag="ACJJDE_001892"
     CDS             1055..1774
                     /gene="tadA"
                     /locus_tag="ACJJDE_001892"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008251 - tRNA-specific adenosine
                     deaminase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0002100 - tRNA wobble adenosine to inosine
                     editing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HGG7541764.1"
                     /translation="MLTTPPLAPKTVAALHRLGIRTLEELRQNGAVQTFLLLKASGLT
                     LTKSTLWQLQSLLDGTPPQEMAQHDKTRLLAELKNHPPVAAFPPQGEMAHFMGLALEQ
                     AKLSALMGEIPVGAVIVSDGKIIASAHNTCIADCNVSRHAEINALAQAGSEMQNYRLD
                     GCDIYITLEPCAMCASALIQARIRRVIYGAAEPKTGAAGSIVNLFADKRLNTHTAIRG
                     GILQEECRAVLSRFFQNKRKG"
     gene            1779..2267
                     /locus_tag="ACJJDE_001893"
     CDS             1779..2267
                     /locus_tag="ACJJDE_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF456 domain-containing protein"
                     /protein_id="HGG7541765.1"
                     /translation="MTALLVILALALIAAGTAGIVYPALPGLALMFAGTWLLAYSGGY
                     QIYGAGVLWTVGLISLAGILADYVAGIWGTKYTGAGKLAVRGALVGSIIGMFFSLPGL
                     ILGPFIGAAAGELIDRRNMLQAGKAGLGTLLGLVVGTAFKIGCAVSILFILLVKYIAY
                     LF"
     gene            2333..3085
                     /gene="rlmB"
                     /locus_tag="ACJJDE_001894"
     CDS             2333..3085
                     /gene="rlmB"
                     /locus_tag="ACJJDE_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HGG7541766.1"
                     /translation="MANQRPIYGFHAVNARLWQNPKSIVELYVQEGKNDVRTREVLEK
                     AANENIRVYFADADRLNAISKGARHQGVVGFIDASKNHVHLEDVLENLSEPPLLLILD
                     GITDPHNLGACLRTADAMGVHAVIAPKDKSAGLNATVSKVASGAAETVPYITVTNLAR
                     TLRELKEYGIWIIGTDMGGNADLYHCDLPDSAAWVMGNEGDGMRRLTREHCDMLVSIP
                     MFGTVESMNVSVSAGMVLSETRRQRVLKNEKA"
     gene            complement(3147..4538)
                     /locus_tag="ACJJDE_001895"
     CDS             complement(3147..4538)
                     /locus_tag="ACJJDE_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015205 - nucleobase transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleobase:cation symporter-2 family protein"
                     /protein_id="HGG7541767.1"
                     /translation="MSGQLGKGADAPDLVYGLEDRPPFGNALLSAVTHLLAIFVPMIT
                     PALIVGGALELPVEMTAYLVSMAMVASGVGTYLQVNRFGPVGSGMLSIQSVNFSFVTV
                     MIALGAGMKEGGLTKDAMISTLLGVSFVGAFLVCFSAWLLPYLKKVITPTVSGVVVML
                     IGLSLVHVGITDFGGGFGAKADGTFGSMENLGLASLVLLIVLIFNCMKNPLLRMSGIA
                     VGLIAGYIVALFLGKVDFSALQNLPLVTLPVPFKYGFAFDWHAFIVAGAIFLLSVFEA
                     VGDLTATAMVSDQPIEGEEYTKRLRGGVLADGLVSVIATALGSLPLTTFAQNNGVIQM
                     TGVASRHVGKYIAVILVLLGLFPVVGRAFTTIPSPVLGGAMVLMFGLIAIAGVRILVS
                     HGIRRREAVIAATSVGLGLGVAFEPEVFKNLPVLFQNSISAGGITAVLLNLVLPEDKT
                     EAAVKFDTDHLEH"
BASE COUNT         1162 a         1490 c         1126 g          872 t
ORIGIN      
        1 aaggcatacg gtaaacacgc ccccttgccg tcggcgtgct tccgcaaacc aaaatataac
       61 gtcggcacgc tttccgctat aatccgtatt tttccaaacc tgaaacgtta tgccgacccc
      121 gaaagccttt gccctgctcg ggccgaccgc ctgcggcaaa accgcgctcg ccctcaaaat
      181 tgccgaaacc ttgcctgtcg aaatcatcag cctcgattcc gcgctggttt accgcgatat
      241 ggacatcggc acggcgaaac cgtctcatgc cgagcgttcc tttgtaccgc accaccttat
      301 cgacatcatt acgcctgttc agacatacag tgccgcccgt tttgtcgaag actgcacgcg
      361 tctgattggc gaaatcacgg cgcgtgggaa atatccgctg attgtcggcg gcacgatgat
      421 gtatttccgc gccctgaccc aaggtttgaa cgatttgccc gaagccgacg cctgcctgcg
      481 tgccgacttg gacgaacaaa aacaaatgta cggcttggat ttcctctacc gcaccctgca
      541 aaaagtcgac cctgaaacag catgccgtct gaaaccgaac gacagccagc gtatcggacg
      601 cgctttggaa gtttattatt taaccggcaa accgatgagt acgcatctcg gcagcccaac
      661 ctcccatacg ctccccttcg atttgcatac cgccgccctg attcccgaaa accgcgcccg
      721 cctgcatgaa aacatcgccc tgcgtttcca cctgatgctt gaacagggct ttatcggcga
      781 agtagaaaac ctgcgccgcc tctatcccag cctgaccgcc gactcccctg ccatacgctg
      841 cgtcggctac cgtcaggcat gggaatatct ggacggaaaa accgatttcc cggcatttgt
      901 cgagaaaggc attgccgcca cgcgccaact tgccaaacgc caactgactt ggttgcgcaa
      961 aacaccttta gactgcgtta ccgacccgtt ttcagacggc aattcatgca cacgcctgat
     1021 tgaggcggca aaacggtttt tcggcgcata aactatgctg accacgccgc cgctcgcccc
     1081 caaaaccgtc gccgccctac acaggctcgg tatccgtacg ctcgaagaac tgcggcaaaa
     1141 cggcgcggtt caaaccttct tgttattgaa ggcatcaggt ttgaccctca cgaaaagcac
     1201 gctgtggcag cttcagtcgc tgctggacgg cacgccgccg caagaaatgg cgcaacacga
     1261 taaaacccgc ctgcttgccg agttgaaaaa ccatccgccc gtcgccgcct ttcccccgca
     1321 aggcgaaatg gcgcatttca tgggtttggc attggaacag gcgaaactgt ccgcattaat
     1381 gggcgaaata cccgtcgggg cagtcatcgt ttcagacggc aaaatcatcg catcggcaca
     1441 caacacctgc attgccgact gcaatgtcag ccggcacgcc gaaatcaacg ccttggcaca
     1501 ggcaggcagc gaaatgcaaa actaccgcct tgacggatgc gacatctaca tcaccctcga
     1561 accctgcgcc atgtgcgcgt ccgcactgat acaggcacga atcaggcgcg tgatctacgg
     1621 tgcggcagaa cccaaaaccg gcgcggcagg aagcatcgtc aacctgtttg ccgacaaacg
     1681 cctcaatacg cacaccgcca tacggggcgg aatcctgcaa gaagaatgcc gcgccgtatt
     1741 aagccgtttt ttccaaaaca aaagaaaagg ttgaacctat gaccgccttg ctcgtcatcc
     1801 tcgccctcgc cctgatagcc gccggtacgg cgggcatcgt ttaccccgcc ctgcccggat
     1861 tggcattgat gtttgccgga acctggctgc tcgcctactc cggcggctac caaatctacg
     1921 gcgcgggcgt tttgtggacg gtcggactca tcagccttgc cggcatactg gcggactatg
     1981 tggcaggcat atgggggaca aaatataccg gagcgggcaa gctcgccgtt cgcggcgcat
     2041 tggtcggcag tatcatcggt atgtttttct cccttcccgg actaatactc ggtcccttta
     2101 tcggcgcggc ggcaggcgaa ctgatcgatc ggcgcaatat gcttcaggca ggtaaagcgg
     2161 gcttgggtac gctgttgggg cttgtcgtcg gcacggcgtt caaaatcggc tgcgccgtat
     2221 ccatcttgtt tatcctgttg gtgaaataca tcgcctacct gttttaaccc cttcagacgg
     2281 cataccggca aattgctaca atgccgtctg aacccttttc acaaagcacc atatggcaaa
     2341 ccaaagacct atctacggct tccatgccgt caacgcccga ttgtggcaaa accccaaatc
     2401 catcgtcgaa ctctatgtcc aagaaggcaa aaacgatgta cgcacgcgcg aagtgttgga
     2461 aaaggcggca aacgaaaaca tccgcgtata ttttgccgat gccgaccgcc tcaacgccat
     2521 cagcaaaggt gcgcgccatc agggcgtggt cggatttatc gatgcctcca aaaaccacgt
     2581 ccacctcgaa gacgtattgg aaaacttaag cgaaccgccg ctgctgctga tactcgacgg
     2641 catcaccgat ccgcacaacc tcggcgcgtg cctgcgtacc gccgacgcaa tgggcgtaca
     2701 tgccgtcatc gcaccgaaag acaaaagcgc ggggctgaac gccaccgtca gcaaagtcgc
     2761 cagcggcgcg gcggaaaccg tcccctacat caccgtaacc aacctcgccc gcaccctgcg
     2821 cgagctgaaa gaatacggca tttggatcat cggcaccgat atgggcggca acgccgacct
     2881 ttaccattgc gatctgcccg acagcgcggc atgggtgatg ggcaacgaag gcgacggtat
     2941 gcgccgcctg acacgcgaac attgcgacat gctggtgtcc atacccatgt tcggcacggt
     3001 cgaaagcatg aacgtctccg tgtctgccgg aatggtatta agcgaaaccc gccggcagcg
     3061 cgtattaaaa aacgaaaaag cgtaagcctc aaaaacaatg ccgtctgaaa cagggattct
     3121 gtttcagacg gcattcgttt tcaaaatcag tgttccaagt ggtcggtatc aaacttgacc
     3181 gccgcctcgg ttttatcttc gggcaagacc aaattcagca agactgccgt aatgccgccg
     3241 gcggaaatag agttttggaa caagacaggc aggtttttaa acacttccgg ctcaaacgcg
     3301 acacccaagc ccaaaccgac cgacgttgcc gcaattaccg cttcgcgcct gcggatgccg
     3361 tggctgacca aaatccgcac gcccgcaatc gcaatcaagc cgaacatcaa aaccatcgcg
     3421 ccgcccaaca ccggactcgg aatcgtcgta aacgcgcgtc cgacaacggg gaacagaccc
     3481 aacagcacca aaatcacggc aatatatttg cccacatggc gcgaagccac gccggtcatc
     3541 tgaatcacgc cgttgttttg cgcaaacgtc gtcagcggca gcgaacccaa agccgtcgca
     3601 atcaccgaca ccaagccgtc agccaacacg ccgccgcgca ggcgtttggt gtattcctcg
     3661 ccttcaatcg gctgatcgga caccattgcc gtcgccgtca aatcgccgac cgcctcaaac
     3721 acgctcaaca ggaaaatcgc gcccgccaca ataaatgcgt gccagtcgaa agcaaaaccg
     3781 tatttaaacg gtacgggcag cgtaaccagc ggcaggtttt gcagcgcgga aaaatccacc
     3841 ttgcccaaaa acagcgcgac aatgtaaccg gcaatcagac cgaccgcgat gccgctcatc
     3901 cgcaacagcg ggtttttcat gcagttgaat atcaacacaa tcagcaacac cagcgaagcc
     3961 agccccaagt tttccatcga gccgaacgtg ccgtccgcct tcgcgccgaa gccgccgccg
     4021 aaatcggtaa taccgacgtg taccaaactc aagccaatga gcatcacgac cacgccgctg
     4081 accgtcggcg taatcacttt tttcaaatac ggcaaaagcc acgccgagaa acacaccaaa
     4141 aacgcgccga caaacgatac acccaagagc gtcgaaatca tcgcatcctt agtcaaaccg
     4201 ccctccttca tccctgcgcc cagcgcaatc atcacggtaa cgaacgaaaa attcaccgac
     4261 tggatggaca gcatccccga accgaccggc ccgaagcggt tgacctgcaa ataagtgccg
     4321 acacccgacg caaccatcgc catcgacacg agatacgccg tcatctccac cggcaattcc
     4381 agcgcgccgc ccacaatcag cgcgggcgta atcatcggca caaaaatcgc caaaagatgg
     4441 gtaaccgcgc tcaagagcgc attaccgaac ggcggcctgt cttccaaacc gtacaccaaa
     4501 tcaggcgcat ccgcaccttt gcccaactga ccgctcattg tatttcctta ttttaaaggt
     4561 tgaaaaatcc aagcgcggat tgtagcgaat ctgccgcacg gcttcaattt gcatttcaga
     4621 cggcatccgt ctggtccaca cgtttaccac
//
LOCUS       DBBZXU010000128         4512 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.128, whole genome shotgun sequence.
ACCESSION   DBBZXU010000128 DBBZXU010000000
VERSION     DBBZXU010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4512)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4512)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4512
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.128"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            433..957
                     /gene="nspA"
                     /locus_tag="ACJJDE_001896"
     CDS             433..957
                     /gene="nspA"
                     /locus_tag="ACJJDE_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein NspA"
                     /protein_id="HGG7541768.1"
                     /translation="MKKALATLIALAIPAAALAEGASGFYVQADAAHAKASSSLGSAK
                     GFSPRISAGYRINDLRFAVDYTRYKNYKAPSTDFKLYSIGASAIYDFDTQSPVKPYLG
                     ARLSLNRASVDLGGSDSFSQTSTGLGVLAGVSYAVTPNVDLDAGYRYNYIGKVNTVKN
                     VRSGELSAGVRVKF"
     gene            1093..1482
                     /locus_tag="ACJJDE_001897"
     CDS             1093..1482
                     /locus_tag="ACJJDE_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003754044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HGG7541769.1"
                     /translation="MSKTIIHTDKAPAAIGAYSQAVRAGDTVYMSGQIPLDPATMTVV
                     GNGDFRAEARQVFQNLQAVAEAAGGTLADIVKLNAYLTDLGNFAVFNEVMAEFIAEPF
                     PARAAVGVASLPKGVQVEAEAVLVLNA"
     gene            1560..2390
                     /locus_tag="ACJJDE_001898"
     CDS             1560..2390
                     /locus_tag="ACJJDE_001898"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008803 -
                     bis(5'-nucleosyl)-tetraphosphatase (symmetrical) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="symmetrical bis(5'-nucleosyl)-tetraphosphatase"
                     /protein_id="HGG7541770.1"
                     /translation="MAHYAIGDIQGCFDELTALLGKIGFNHGTDTLWLTGDIVNRGPK
                     SLETLQFCIRHENSVQIVLGNHDLHLLAVGCGEGAPKRSDTIEPILKHPDGKKMLDWL
                     RAQPLLIREGSRVMVHAGILPQWRIAKAESLAREAEAELRGKKYVKFFSKMYGNKPAA
                     WDEGLEGYARLRFIVNAFTRMRALTFKNELDFDYKSTVKKMPPYLRPWFKAPDRQNLD
                     RTIIFGHWSSLGYTNADNVISLDTGALWGGQLTAVNLETEEITQVQAAGGIDWKSFAK
                     "
     gene            2405..3862
                     /locus_tag="ACJJDE_001899"
     CDS             2405..3862
                     /locus_tag="ACJJDE_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HGG7541771.1"
                     /translation="MHKILPIAHVLSRLGMLFSFILLIPAALSYAFSDGAYTAFATTA
                     TVTLSGSCIVRLATLRFRRELRPRDGFTLVLMLWLAFAAMAAMPMYLYFPNMGFTDAF
                     FESMSGLTTTGATVIPHVDGLAPSVNFWRHMLNWLGGMGIIVLAVAILPMLGVGGTQL
                     FKAEIPGIDKESKMSPRISQVAKKLWFGYTLITILAAACLHFAGMGWFDAVCHAMATL
                     SLGGFSTHDASIAYYNSPLIEAVIIVFTIVGGINFANHFAALNSRSLKTYWKDEECRT
                     MLLLLSGSILAAALYLWHTGYYAGFTESLRYTAFNFVSIGLANGLANTDFAQWPLLIS
                     LWMFFLANILANSGSTGGGIKTIRALVLFKFSLREMMVLLHPKAVRTVKISGKAIPDR
                     LALTVMSFIFIYFMTVVLFSFLLMASGMEFTTAFTAVIACITNAGPGLGEVGPAGNYA
                     GLDVMQKWICVTAMLLGRLEIFTVFILFTPAYWKK"
     gene            complement(3903..4292)
                     /locus_tag="ACJJDE_001900"
     CDS             complement(3903..4292)
                     /locus_tag="ACJJDE_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541772.1"
                     /translation="MWKISKENCEDLGFAIVCMFYDAINLSEFKLWLDIVVRDTPIDT
                     IPLYIFDLIDFDKSIGEIYDVIGVVNYGYISNDQKNALTGIAFLRGIDVYDPPISKEK
                     ALKALEKYPEIYQRFQHFFPFVELPLF"
BASE COUNT         1070 a         1441 c         1006 g          995 t
ORIGIN      
        1 cgcaaacaaa tcggcggccg cccgggaaaa cccgccccga acgcgtccgg aaaatatgct
       61 tatcgatgga aaacgcagcc gcatcccccg ccgggcgttt cagacggcac agccgccgcc
      121 ggaaatgtcc gacgcttaag gcacagacgc acacaaaaaa ccgtatgcct gcacctgcaa
      181 caatccgaca gataccgctg ttttttccaa accgtttgca agtttcaccc atccgccgcg
      241 tgatgccgcc accaccattt aaaggcaacg cgcgggttaa cggctttgcc gtcggcaaag
      301 cagccggata ccgctacgta tcttgaagta ttgaaaatat tacgatgcaa aaagaaaatt
      361 taagtataat acagcaggat tctttaacgg attcttaaca atttttctaa ctgaccataa
      421 aggaaccaaa atatgaaaaa agcacttgcc acactgattg ccctcgctat cccggccgcc
      481 gcactggcgg aaggcgcatc cggcttttac gtccaagccg atgccgcaca cgcaaaagcc
      541 tcaagctctt taggttctgc caaaggcttc agcccgcgca tctccgcagg ctaccgcatc
      601 aacgacctcc gcttcgccgt cgattacacg cgctacaaaa actataaagc cccatccacc
      661 gatttcaaac tttacagcat cggcgcgtcc gccatttatg acttcgacac ccaatcgccc
      721 gtcaaaccgt atctcggcgc gcgcttgagc ctcaaccgcg cctccgtcga cttgggcggc
      781 agcgacagct tcagccaaac ctccaccggc ctcggcgtat tggcgggcgt aagctatgcc
      841 gttaccccga atgtcgattt ggatgccggc taccgctaca actacatcgg caaagtcaac
      901 actgtcaaaa acgtccgttc cggcgaactg tccgccggtg tgcgcgtcaa attctgatat
      961 gcgccttatt ctgcaaaccg ccgagccttc ggcggttttg ttttctgcca ccgcaactac
     1021 acaagccggc ggttttgtac gataatcccg aatgctgcgg cttctgccgc cctatttttt
     1081 gaggaatccg aaatgtccaa aaccatcatc cacaccgaca aagcccccgc cgccatcggc
     1141 gcgtacagcc aagccgtccg agcaggcgac accgtttaca tgagcggtca aatccccctc
     1201 gatcccgcca cgatgaccgt cgtcggcaac ggcgatttcc gcgccgaagc gcgccaagtg
     1261 ttccaaaacc tgcaagccgt cgccgaagcg gcaggcggca cgctggccga catcgtcaaa
     1321 ctcaacgcct acctgaccga cttgggcaat tttgccgtct tcaacgaagt gatggcggaa
     1381 tttattgccg agcccttccc cgcccgcgcc gccgtcggcg ttgcctccct gccaaaaggc
     1441 gtgcaggtcg aagccgaagc cgtcctcgtt ttgaacgcat aattccacgt tcggactgca
     1501 tgatatttca aaaccatgcc gtccgaaccg caacactttc ccacttcaca acatctgcaa
     1561 tggcacatta cgcaatcggc gacatacaag gctgtttcga cgaactgacc gcgctgctcg
     1621 gcaaaatcgg tttcaaccac ggcacggaca ccctctggct gacgggcgac atcgtcaacc
     1681 gcggcccgaa atccctcgaa acgctgcaat tctgcatccg gcacgaaaac agcgtgcaaa
     1741 tcgtcctcgg caaccacgac ctgcacctgc tcgctgtcgg ctgcggcgaa ggcgcgccca
     1801 aacgcagcga cacaatcgaa cccatactca aacaccccga cggaaaaaaa atgctcgact
     1861 ggctgcgtgc gcaaccgctg ttgatacgcg agggcagccg cgtgatggta cacgccggca
     1921 tcctgccgca atggcgcatc gccaaagccg aatcgctcgc tagagaagcc gaagccgaac
     1981 tgcgcggcaa aaaatacgtc aaattcttct ccaaaatgta cggcaacaaa ccggccgcgt
     2041 gggacgaagg tttggaaggc tatgcccgcc tgcgcttcat cgtcaacgcc ttcacgcgga
     2101 tgcgcgccct gacctttaaa aacgaactgg atttcgacta caaatccaca gtgaaaaaaa
     2161 tgccgcctta cctgcgcccg tggttcaaag cccccgaccg gcaaaacctc gaccgcacca
     2221 tcatcttcgg acactggtcc tcgctgggct acacgaatgc cgacaacgtc atctcgctgg
     2281 acaccggcgc gctgtggggc ggacagctga ccgccgtcaa cctcgaaacg gaagaaatta
     2341 cccaagtcca agccgccggc ggcatagact ggaaaagctt cgcaaaataa cggaccgccc
     2401 cactatgcac aaaatcctgc ccatcgccca cgtcctctcc cgactgggta tgctgttttc
     2461 ctttatcctg ctgatacccg ccgccctctc ctacgccttt tcggacggcg cgtacaccgc
     2521 cttcgccacc accgcgaccg ttaccctttc cggctcgtgc atcgtccggc tcgccaccct
     2581 ccggttcagg cgcgaactgc gcccgcgcga cggcttcacc ctcgtcctga tgttgtggct
     2641 ggcgtttgcc gctatggcgg cgatgccgat gtacctgtat ttcccgaata tgggctttac
     2701 cgacgcattt tttgaatcga tgtcgggact gaccaccacc ggcgcgaccg tcatccccca
     2761 cgtcgacggg ctcgccccct ccgtcaactt ttggcggcat atgctcaact ggctgggcgg
     2821 gatgggcatc atcgtccttg ccgtcgccat cctgcctatg ctcggcgtag gcggcacgca
     2881 gttattcaaa gccgaaatcc ccggcattga caaagaaagc aaaatgtcgc cgcgcatttc
     2941 ccaagtggcg aaaaaacttt ggttcggcta caccctgatc accatcctcg cggcagcctg
     3001 cctgcatttt gccgggatgg gctggttcga tgccgtctgt cacgcgatgg cgaccctctc
     3061 gctgggcggg ttttccaccc acgatgccag catagcttat tacaactccc ccctcatcga
     3121 agcggtcatc atcgttttca ccattgtcgg cggcatcaat tttgccaacc atttcgccgc
     3181 cctcaacagc cgcagcctca aaacctattg gaaagacgaa gaatgccgga cgatgctgct
     3241 gctgctctcc ggcagcatcc ttgccgccgc cctgtacctg tggcacaccg gctattacgc
     3301 cggttttacc gaatccctgc gctacaccgc cttcaacttc gtctccatcg gactggcaaa
     3361 cgggctggcc aacaccgact tcgcacaatg gccgctcctg atttccctgt ggatgttttt
     3421 cctcgccaac atcctcgcca actccggctc gaccggcggc ggcatcaaaa ccatacgcgc
     3481 cctcgtcctg ttcaaattca gcctgcgcga aatgatggtg ctgctgcacc ccaaagccgt
     3541 ccgcaccgtc aaaatcagcg gcaaggccat acccgaccgc ctcgcgctga ccgttatgtc
     3601 cttcatcttc atctacttta tgaccgtcgt cctcttcagc ttcctgctga tggcgagcgg
     3661 tatggaattt accaccgcct tcaccgccgt catcgcctgc atcaccaacg ccggccccgg
     3721 cctgggcgaa gtcgggcccg ccggcaatta cgccggtttg gacgtgatgc agaaatggat
     3781 ctgcgttacc gccatgctct tgggcaggct ggaaatcttc accgtcttca tcctcttcac
     3841 ccccgcctac tggaagaaat aaaaaatgcc gtctgaaaac ttttcagacg gcatattgtc
     3901 ttttaaaaaa gcggaagctc tacaaaagga aagaaatgct gaaacctctg ataaatttca
     3961 ggatatttct ctaaggcttt taatgctttt tcttttgaaa taggcggatc atagacatct
     4021 atccccctta agaaggcaat gcccgttaat gcattttttt gatcatttga aatgtaacca
     4081 taattaacga ctccaattac atcataaatt tcccctatac tcttatcaaa atcaatcaaa
     4141 tcaaaaatat acaatggaat tgtatcaata ggagtatctc tgacaactat atccaaccat
     4201 aatttaaatt cagaaagatt aatagcatca tagaacatac agactattgc aaatcctaaa
     4261 tcttcacaat tttctttact aattttccac ataattattt acctttatcc attgcttccc
     4321 aaccgataca tccggtattt tagattctcc tttgccgtca aacgctcttt tggttacctg
     4381 ctttgtatca aaaatgccgt ctgaaagccg aataccgctt cagacggtat tttgattgtt
     4441 gggtttttaa tcagagcttt gtttgataat ttgttatttt gaataaaata caggttctgt
     4501 cgagctgata ac
//
LOCUS       DBBZXU010000129         4510 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.129, whole genome shotgun sequence.
ACCESSION   DBBZXU010000129 DBBZXU010000000
VERSION     DBBZXU010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4510
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.129"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(115..1053)
                     /locus_tag="ACJJDE_001901"
     CDS             complement(115..1053)
                     /locus_tag="ACJJDE_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HGG7541773.1"
                     /translation="MLELNGLCKRFGGKTVADNICLTVGRGKILAVLGRSGCGKSTLL
                     NMIAGIVRPDGGEIQLNGENITRMPPEKRRISLMFQDYALFPHMSALENAAFGLKMQK
                     MPKAETERLAMAALAEVGLENEAHRKPEKLSGGEKQRLALARALVVRPSLLLLDESFS
                     SLDTHLRGTLRRMTAERIRNGGIPAVLVTHSPEEACTTADEIAVMHEGKILQYGTPET
                     LVQTPADVQVARLMGLPNTDDDRHIPQHAVRFDQDGIACRVLSRTCLPESFSLSVLHP
                     EHGILWLNLDMRHAGEISGNDTVHIRIEDREIVRFR"
     gene            complement(1062..1937)
                     /locus_tag="ACJJDE_001902"
     CDS             complement(1062..1937)
                     /locus_tag="ACJJDE_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HGG7541774.1"
                     /translation="MPTVRFTESVSKHDLDALFEWAKASYGAESCWKTLYLNRLPLGN
                     LSPEWAERVKKDWEAGCSESSDGIFLNADGWSDMGGRLQHLARTWNKAGLLHGWRNEC
                     FDLTDGGGNPLFTLERAAFRPFGLLSRAVHLNGLTESDGRWHFWIGKRSPHKAVDPDK
                     LDNIAAGGVSGGEMPSEAVCRESSEEAGLDKTLFPFIRPVSRLHSLRPVSRGVHNEIL
                     YVFDAVLPETFLPENQDGEVACFEKMDIGSLVATMLSGNMMHDAQLVTLDAFCRYGLI
                     DAAHPLSEWLDGIRL"
     gene            complement(2119..2195)
                     /locus_tag="ACJJDE_001903"
     tRNA            complement(2119..2195)
                     /locus_tag="ACJJDE_001903"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2159..2161),aa:Met,seq:cat)
     regulatory      2345..2444
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            2535..4436
                     /gene="thiC"
                     /locus_tag="ACJJDE_001904"
     CDS             2535..4436
                     /gene="thiC"
                     /locus_tag="ACJJDE_001904"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003686973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HGG7541775.1"
                     /translation="MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRG
                     DIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLNE
                     RGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKSGGNVTQLHYARRGIITPE
                     MEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRQEIAAGRA
                     IIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDL
                     STGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVD
                     YFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAY
                     DVSFSLGDGLRPGCIADANDESQFAELHTLGELTDKAWKHDVQVMIEGPGHVPLQRVK
                     ENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHL
                     GLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPE
                     RAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEF
                     VKKGAKIYS"
BASE COUNT         1077 a         1299 c         1200 g          934 t
ORIGIN      
        1 gcggtttcag ttgtttccga taaatttttg cagccctgat aaaaaatatg gctgctttgg
       61 taaaaaaatg ccgtctgaaa ggtttttcag acggcatttg tttttaagga agcatcagcg
      121 gaagcggacg atttcccggt cttcgatacg gatgtgtacc gtatcgtttc ccgatatttc
      181 accggcgtgc cgcatatcga ggttcagcca caggatgccg tgttccggat ggaggacgga
      241 caggctgaac gattcgggca aacaggtgcg ggacaatacg cggcacgcta tgccgtcttg
      301 atcgaaacgc actgcatgtt gcggtatatg gcggtcatcg tcggtgttgg gcaaccccat
      361 cagtcgggcg acctgcacgt cggcaggcgt ttgaaccaag gtttcgggcg tgccgtattg
      421 gaggattttc ccttcgtgca tcacggcgat ttcgtccgcc gtcgtacagg cttcttcggg
      481 cgaatgggta accaaaacgg cagggatgcc gccgtttcgg atgcgttcgg cggtcatacg
      541 gcgcagcgtg ccgcgcaaat gcgtgtccaa actggaaaac gattcgtcca gcaacagtag
      601 ggaagggcgg acaaccaaag cgcgtgccag tgccaaccgt tgtttctcgc ctccggaaag
      661 tttttcaggc ttgcggtgtg cctcgttttc cagtccgact tcggcaagtg ccgccatagc
      721 aaggcgttcg gtttcggctt tcggcatttt ttgcattttc aaaccgaatg ccgcattttc
      781 cagcgcactc atatggggaa acagcgcgta atcttgaaac atcagcgaaa tacggcgttt
      841 ttcgggcggc atacgggtaa tgttttcccc gttcagctga atttcgccgc cgtccggccg
      901 gacgatgccc gcaatcatat tcagcagggt ggattttccg cagcccgacc gccccagtac
      961 ggcgagtatt ttgccgcgcc cgacagtcag gcagatgttg tcggcaaccg ttttgccgcc
     1021 gaagcgtttg cagagtccgt tcagttcaag catggcgcat cctataaacg tatgccgtcc
     1081 agccactcgg acagcggatg ggcggcatca atcagaccgt aacggcaaaa cgcgtccagc
     1141 gtaaccagtt gcgcgtcgtg catcatgttt cccgacaaca tggtggcaac caagctgccg
     1201 atgtccattt tttcaaaaca cgcaacctcg ccgtcctgat tttcaggcag gaaggtttcg
     1261 ggtaggacgg catcgaatac atacaggatt tcattgtgca caccccggct gacggggcgc
     1321 aggctgtgca gccgggatac cggacggata aacggaaaca gcgttttatc caaaccggct
     1381 tcttcgctgc tttcgcggca cacggcttca gacggcattt cgccgccgga aacaccgccg
     1441 gcggcaatat tgtcgagttt gtcgggatcg actgctttgt gcggactgcg cttgcctatc
     1501 cagaaatgcc atcggccgtc cgattcggtc agtccgttga gatggacggc gcggctgagc
     1561 agtccgaacg gacggaaagc ggcgcgttcg agcgtgaaca aggggttgcc gccgccgtcg
     1621 gtcaggtcga aacactcgtt gcgccatccg tgaagcagcc ccgccttgtt ccatgtgcgg
     1681 gcgaggtgct gcaagcggcc gcccatatct gaccagccgt ccgcattcag gaaaatgccg
     1741 tctgaagact ccgagcagcc tgcctcccag tcttttttga cgcgctccgc ccattccggc
     1801 gacagattgc ccaaaggcag acggttcaga tacagcgttt tccagcaact ttctgcaccg
     1861 taacttgctt ttgcccactc gaacagggca tcaaggtcgt gtttgctgac ggattcggta
     1921 aaacggacgg tcggcatagt cggctttctt gaagacaatg cggaagattg tagccaaact
     1981 gcctgaattt gcaaccgcaa acagacggcg ggctgccgtt ccgatattgc ggcaggaagg
     2041 aaaatccggc aaaaaacgga ggcggcagga aacaggtaaa acaaaacccc tcggcattga
     2101 accgaggggt ttgatatttg gttgcgggag caggattcga acctacgacc ttcgggttat
     2161 gagcccgacg agctaccatg ctgctccatc ccgcgtcaga agatgaaact atacggcaga
     2221 ttttttatgt tgtcaaacat tacttccgcg aaaaatcata aaattttgcc gtccggcggt
     2281 ttatgcctga tttgaaatat tattttcttt acaaaagttc atgttcgtga tttaattttg
     2341 gttaacattg aaacaggggt gctgcctgat gttcaggcgg ctgagaaata ccctttacac
     2401 ccgatcggga taatacctgc gtggggagtt ttcacggatt ctgcctttca gacagcattg
     2461 gttttcaaat gccgtctgaa aacgcgaaac gctcctgttt ctttatttta aacgagaaaa
     2521 caggagcatt ttttatgact acgccaaaaa aaaccgccaa aacttccggc aacgaagcgc
     2581 gcgaacttgc cgacttgagc gaagacatcg gcatccgctt caaatatccg aactcggaac
     2641 gcgtgtatct gcaaggcagc cgtggcgaca tccgcgtgcc tttgcgcgaa atccgccagg
     2701 acgacaccta cacggcgcaa ggcacggaag ccaacccgcc gattcccgtc tatgacacca
     2761 gcggcgtgta tggcgatccg gcggcgcaca tcgacctgaa acaaggcctg ccgcacatcc
     2821 gcaccgcatg gctgaacgaa cgcggcgata ccgaaatcct gcccaagctc tccagcgaat
     2881 acggcatcga acgcgcacac gatccgaaaa ccgcccatct gcgcttcaac caaatcaccc
     2941 gcccgcgccg cgcgaaaagc ggcggcaacg ttacccagct tcactacgcg cgccgcggca
     3001 tcatcacgcc cgaaatggag tttgtcgcca tacgcgaacg tttaaaatta gacgaattgt
     3061 cccaaaaacc ggaatacgcc aaactcttga aacagcacgc agggcaaagt ttcggcgcga
     3121 atatcccgac ccatcccgac caaatcacgc ctgaattcgt gcgccaagaa atcgccgccg
     3181 gacgcgcgat tatccccgcc aacatcaacc accccgaact cgaaccgatg attatcggcc
     3241 gcaacttccg cgtcaaaatc aacggcaatt tgggcaactc cgccgtcacc tccagcctga
     3301 ccgaagaagt cgaaaaaatg gtgtggtcgc tgcgttgggg cgcggacaca attatggact
     3361 tatccacagg cgcgcacatc cacgaaacgc gcgaatggat tatccgcaac gcgcccgtcc
     3421 ccatcggcac tgtgccgatt taccaagcgt tggaaaaaac cggcggcatc gccgaagatt
     3481 tgacttggga tttgttccgc gacaccttaa tcgaacaggc ggagcaaggc gtggactatt
     3541 tcaccataca cgcgggcgtg ttgctgcgtt atgtaccgat gaccgccaac cgcctcaccg
     3601 gcatcgtctc gcgcggcggt tcgattatgg cgaaatggtg tttggcacat catcgggaaa
     3661 atttcctcta cacgcatttc gacgaaatct gcgaaattat gaaagcgtat gacgtatcgt
     3721 tcagcctcgg cgacggcctg cgccccggct gcattgccga tgccaacgac gaatcccaat
     3781 tcgccgaact gcacaccttg ggcgaattga ccgataaagc gtggaaacat gacgtacaag
     3841 tcatgatcga aggccccggc catgtgccgc tgcaacgcgt caaagaaaat atgaccgaag
     3901 agctgcaaca ctgttttgaa gcgccgtttt acaccctcgg cccgctcgtt accgacatcg
     3961 cccccggcta cgaccacatc acctcgggca taggcgctgc caatatcggc tggtacggca
     4021 cggcgatgct ctgttacgtt acccccaaag aacatttggg actgcccgac aaagaagacg
     4081 tgcgtaccgg catcatcacc tacaaactcg ccgcccacgc cgccgacctc gccaaaggct
     4141 ggccgggcgc acagttgcgc gacaacgccc tgagcaaggc gcgtttcgag ttccgctggc
     4201 gcgaccagtt ccgcctaagc ctcgaccccg aacgcgccga aagcttccac gacgaaaccc
     4261 tgcccgccga aggcgcgaaa atcgcccact tctgttcgat gtgcggcccc aaattctgct
     4321 cgatgaaaat cacgcaggaa gtgcgcgact acgccgacaa gcaaaaagcc caacggcagg
     4381 gcatggagga aaaagcggtc gagttcgtca aaaaaggcgc gaagatttac agttgaaacg
     4441 tcaagcaaaa aatgccgtct gaaacccgga aaaaaggctt cagacggcat tctttcgctt
     4501 gtgaaaatat
//
LOCUS       DBBZXU010000130         4309 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.130, whole genome shotgun sequence.
ACCESSION   DBBZXU010000130 DBBZXU010000000
VERSION     DBBZXU010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4309
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.130"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(153..2081)
                     /gene="dnaK"
                     /locus_tag="ACJJDE_001905"
     CDS             complement(153..2081)
                     /gene="dnaK"
                     /locus_tag="ACJJDE_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003753851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HGG7541776.1"
                     /translation="MAKVIGIDLGTTNSCLAISENGQTKVIENAEGARTTPSVIAYLD
                     GGEILVGAPAKRQAVTNAKNTIYAAKRLIGHKFEDKEVQRDIESMPFEIIKANNGDAW
                     VKAQGKELSPPQISAEVLRKMKEAAEAYLGEKVTEAVITVPAYFNDSQRQATKDAGRI
                     AGLDVKRIINEPTAAALAFGMDKGDNKDRKVAVYDLGGGTFDISIIEIANLDGDKQFE
                     VLATNGDTFLGGEDFDQRLIDHIIAEFKKEQGIDLKQDVMALQRLKEAAEKAKIELSS
                     GQQTEINLPYITMDATGPKHLAMKITRAKFESLVEDLITRSIEPCKIALKDAGLSTGD
                     IDDVILVGGQSRMPKVQEAVRDFFGKEPRKDVNPDEAVAVGAAIQGEVLSGGRSDVLL
                     LDVTPLSLGIETMGGVMTKLIQKNTTIPTKASQVFSTAEDNQSAVTIHVLQGERERAS
                     ANKSLGQFNLGDIAPAPRGMPQIEVTFDIDANGILHVSAKDKGTGKAANITIQGSSGL
                     SEEEIERMVKDAEANAEEDKKLTELVASRNQAEALIHSVKKSLADYGDKLDAAEKEKI
                     EAALKEAEEAVKGDDKAAIDAKTEALGTASQKLGEMVYAQAQAEAQAGESEQANASAK
                     KDDDVVDADFEEVKDDKK"
     gene            complement(2289..2561)
                     /locus_tag="ACJJDE_001906"
     CDS             complement(2289..2561)
                     /locus_tag="ACJJDE_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541777.1"
                     /translation="MKKTGKYLIYAAAFTAFCFAFQENRSEAKQPDITLSASLCEQFN
                     ILNAKDMDAEQVSLSKECDIIESSHDWEKEYGNLNEQEMLAGIVYE"
     gene            2747..3433
                     /locus_tag="ACJJDE_001907"
     CDS             2747..3433
                     /locus_tag="ACJJDE_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HGG7541778.1"
                     /translation="METFKDRLVFLWKSEAKQAKIASDIEMTIAGFSRIWNEGGLPKS
                     ETLKKIKQLKGCSIDWLLTGEGNPFPDEAPKKSLAYDTLGNEVDTDEFVFVPRYDIRA
                     AAGYGQFVDHEEPVFTMAFRRHWIENYVTRDTKNLSVISVKGDSMEGVLNDGDSILVN
                     HGENTPRDGLYVLRINENLLVKRLQIVPGGIINVISANEAYPAFEINLNDLTDDVEII
                     GRVEWFGRTI"
     gene            3565..3903
                     /gene="erpA"
                     /locus_tag="ACJJDE_001908"
     CDS             3565..3903
                     /gene="erpA"
                     /locus_tag="ACJJDE_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HGG7541779.1"
                     /translation="MSDESPIIFTDSCCAKVADLIAEENNPDLKLRVFVNGGGCSGFQ
                     YGFTFDEIKNDDDFEIEKNGLVFLVDPMSYQYLVGAEIDYTESLQGSQFVIRNPNAET
                     TCGCGSSFSV"
     gene            3920..4066
                     /locus_tag="ACJJDE_001909"
     CDS             3920..4066
                     /locus_tag="ACJJDE_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541780.1"
                     /translation="MPSERSDGIFTFGKYIIGMNSHIIRLFEDESGFPKGTGGTVSGV
                     FVPL"
     gene            4063..>4309
                     /locus_tag="ACJJDE_001910"
     CDS             4063..>4309
                     /locus_tag="ACJJDE_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541781.1"
                     /translation="MIEMSKDYRNDLYDVYVSYPPQVDRGLIRECLRENLGEEKAEGL
                     IESLDSKPQVLVEEKCTWAKREELHDYFSYLGLDIITR"
BASE COUNT          976 a          858 c         1148 g         1327 t
ORIGIN      
        1 aaaaaatttc cagagaaccg atataacagt tagaacttgg gcttgggaat atcacggtag
       61 atgaatttgg aacctctgtt atgctatggt cttttatctc aattgaaaaa agcgcgaatc
      121 aaacggttcg cgcttttttc agacggcatc aattattttt tgtcgtcttt tacttcttca
      181 aagtcggcat ctacgacatc atcgtctttc tttgcagaag cattggcttg ttcgctttcg
      241 cctgcttggg cttcagcttg tgcttgagcg taaaccattt cccccagttt ttggctggct
      301 gtgcccagtg cttcggtttt ggcatcgata gcggctttgt cgtcgccttt aactgcttct
      361 tcggcttctt tcagcgcggc ttcgattttt tctttctcgg ctgcgtcgag tttgtcgccg
      421 tagtcggcca aagatttttt cacagagtga atcagggctt cggcttggtt gcgggaagcg
      481 accaattcag tcagtttttt atcttcctcg gcattggctt cggcatcttt caccatgcgt
      541 tcgatttctt cttcgctcaa acctgaagaa ccttggatgg tgatgttggc tgctttaccg
      601 gtgcctttgt ctttggcgga aacgtgcagg atgccgttgg cgtcgatgtc gaaggttact
      661 tcgatttgcg gcataccgcg cggtgcaggt gcgatgtcgc ccaagttgaa ctgacccaaa
      721 gatttgttgg cagaagcgcg ttcgcgttcg ccttgcagta cgtggatggt tactgcgctt
      781 tggttgtctt cggcggtaga gaacacttgc gacgctttgg tcgggatggt ggtgttcttc
      841 tgaatcagtt tggtcatcac gccgcccatg gtttcgatac ccaaagacag aggagttacg
      901 tccagtagca atacgtcgct gcggccgccg ctcaatactt cgccttggat cgctgcgcct
      961 acggcaacgg cttcgtcagg gttcacgtct ttgcgcggtt ctttgccgaa gaagtctctc
     1021 acggcttctt gtactttcgg catacgggac tgcccgccga ccaagattac gtcgtcgatg
     1081 tcgccggtgc tcaagccggc atctttcaat gcaattttgc aaggttcgat agagcgggta
     1141 atcaggtctt caaccaggct ttcgaatttg gcgcgggtaa ttttcatcgc caagtgtttc
     1201 gggccggttg cgtccatggt gatgtacggc aggttaattt cggtttgctg gccgctggac
     1261 aattcgattt tggctttttc ggcagcttct ttcaggcgtt gtagagccat cacgtcttgt
     1321 ttcaaatcaa tgccttgttc ttttttgaac tcggcgatga tgtggtcgat gaggcgttgg
     1381 tcgaagtctt caccgcccaa gaaggtatcg ccgttggttg ccaatacttc gaattgtttg
     1441 tcgccgtcga ggttggcgat ttcgatgatg gaaatatcga aagtaccgcc gcccaagtca
     1501 tatacggcta ctttgcggtc tttgttgtcg cctttgtcca taccgaatgc caaagcggct
     1561 gcggtcggct cgttgatgat gcgtttcacg tccaaaccgg cgatacggcc tgcgtctttg
     1621 gtggcttgac gttggctgtc gttgaagtag gcagggacgg taatcacggc ttcggttact
     1681 ttttcgccca agtaagcttc ggcggcttct ttcattttac gcaggacttc tgcggaaatt
     1741 tgaggaggag acagctcttt gccttgtgct tttacccatg cgtcgccgtt gttggctttg
     1801 atgatttcga aaggcataga ttcgatgtcg cgttggactt ctttgtcttc aaatttgtgg
     1861 ccgatcaggc gtttggcggc gtaaatggtg tttttagcgt tggttacggc ttggcgtttg
     1921 gcaggcgcac cgacgaggat ttcgccgccg tccaaataag cgataacgga cggcgtggtg
     1981 cgtgcgcctt ctgcgttttc gatcactttg gtttgaccgt tttcggaaat ggccaaacaa
     2041 gagttggttg tacctaagtc gataccgatt acttttgcca tgtggataat cctatttgat
     2101 tttgcttatt ttgagaaata tgttggaaca ttttgtcccg atgggctgta aatagggcgg
     2161 gcggcgggct gtttcaagct acagcatggc tataagtata taactttatg aatatattgg
     2221 ttttatattt gatttaatac atttggctcc aatgcattta agcataatat ttcaaatggc
     2281 aggcaggttt attcatagac gatgccggcg agcatttcct gttcgttcaa gttgccgtac
     2341 tctttttccc agtcgtgtga agactcgatg atgtcgcatt ctttggaaag ggagacttgt
     2401 tctgcatcca tatctttggc gttcagtatg ttgaattgtt cgcacaggga tgcggataaa
     2461 gtgatgtcag gctgtttggc ttcagaacgg ttttcttgga aggcaaagca gaatgcggta
     2521 aatgccgcag catagataag atatttgccg gttttcttca ttttctatcc tttttctgtc
     2581 aactcaggat taaacctatg gaaaatctta aaaattatgt attgagtaag aaaaatcata
     2641 atttaaattt agtttatcat agttgtttcg tttttgggat agctaaggta aaatatattt
     2701 catgtttact ttagatgatt gaatgaaggg gagcggaagg atatttatgg aaacctttaa
     2761 agacagactg gtttttttat ggaaaagcga agcgaagcag gcaaaaatcg catccgatat
     2821 tgaaatgacg attgcgggct tcagcaggat atggaatgaa ggcggtctgc cgaagtctga
     2881 aacattaaaa aaaatcaagc agttgaaggg gtgtagtatc gattggctgc tgaccgggga
     2941 gggtaatccg tttccggatg aagccccaaa aaaatccctt gcttacgata ccttgggaaa
     3001 tgaagtcgat acggacgagt ttgtctttgt gccgagatat gatattcggg cggctgcggg
     3061 atacgggcag tttgtcgatc atgaggaacc ggtatttaca atggcgttca gacggcattg
     3121 gattgagaat tatgttaccc gcgatacgaa aaacctgtct gtaatttccg tcaaggggga
     3181 ttcgatggag ggggttttga atgacggcga ttcgattttg gtcaatcatg gtgaaaatac
     3241 gccgagggac ggtctgtatg tgttgcggat taatgaaaat ctgctggtta aacgtttaca
     3301 gattgtaccg ggcgggatta tcaatgtgat ttctgcaaac gaggcttatc ctgcttttga
     3361 aatcaatttg aacgatttga ccgatgatgt ggagattatc gggcgtgtcg agtggttcgg
     3421 caggacgatt tgagtttggg gcttgaaatt gcaggcggtc aaacttatct attggaacaa
     3481 ttcctttttc aaaggcgaag cctgcttgcc tttaaagggg gtttgagaga gaatgcagaa
     3541 aatattatat taaggaataa caccatgtcg gatgaaagcc ctattatttt tactgacagc
     3601 tgctgtgcca aagttgccga tttgattgcc gaagaaaaca atcccgattt gaaattgcgg
     3661 gtttttgtca atggcggcgg ctgttcgggt ttccagtacg gatttacttt tgacgaaatc
     3721 aaaaacgacg acgattttga aattgagaaa aacggtttgg tctttttggt cgatccgatg
     3781 agctatcaat atctggtcgg tgcggaaatc gactatacgg aaagtttgca gggttcgcaa
     3841 ttcgtcatcc gcaatccgaa tgcggaaaca acctgcggtt gcggatcgtc gttttccgta
     3901 tgaccgcttg gtttgtgtga tgccgtctga acgttcagac ggcattttta cttttggaaa
     3961 atatattatc gggatgaatt cacatataat ccgattgttt gaagatgaat cgggtttccc
     4021 gaaaggaacg ggcggaacgg tatcaggcgt atttgttccc ttatgattga gatgagtaaa
     4081 gattaccgaa atgatttgta cgatgtatat gtttcctacc cgccccaagt ggatcgcggg
     4141 cttatccggg agtgcctcag ggagaatctc ggcgaggaaa aggcggaagg attgatcgaa
     4201 tcgctcgatt ccaaacctca agtgctggtt gaggaaaaat gcacttgggc gaaacgggaa
     4261 gagttgcatg attatttcag ctatttgggt ttggatatta ttacccgga
//
LOCUS       DBBZXU010000131         4258 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.131, whole genome shotgun sequence.
ACCESSION   DBBZXU010000131 DBBZXU010000000
VERSION     DBBZXU010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4258)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4258
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.131"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            536..2263
                     /gene="ilvB"
                     /locus_tag="ACJJDE_001911"
     CDS             536..2263
                     /gene="ilvB"
                     /locus_tag="ACJJDE_001911"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HGG7541782.1"
                     /translation="MQLSGAQIIVQSLKAEGVEYVFGYPGGAVIEIYDALFQLNKFKH
                     ILTRHEQAAVHAADAYARVSGKVGVALVTSGPGVTNALTGIATAYTDSIPMVVISGQV
                     GNSLIGTDAFQEVDTVGITRPCVKHNFLVTDINELAETIKKAFQIAASGRPGPVVVDV
                     PKDVTQAMAKFSYPQEDIFIRSYQPVVQGHIGQIKKAVQMLASAKRPVVYFGGGVVLG
                     NASEELTRFVRMTGAPCTGTLMGLGAYPSGDRQFLGMLGMHGTYEANLAMQNADVVLA
                     VGARFDDRVVSVPSKFFEKAKKVIHIDVDPSSIAKRVKADIPIVGDVKNVLSEMVALW
                     QKQESVPSEDALGKWWKTIEEWRSRDCLWFDNGSEIIKPQYVIQKLAEITGNSAIITS
                     DVGQHQMFAAQYYPFERPRQWLNSGGLGTMGVGLPYAIGAKLAAPDQDVFCITGDGSI
                     QMNIQELSTCFQYRIPVNVITLNNGYLGMVRQWQEIYYGGRESETYFDSLPDFVKLAE
                     AYGHIGIRVDKKSDVEGALLEALNQKDRLVFIDFLTDQKQNVMPMVGNGKGLDEMVLP
                     PHMRADEKA"
     gene            2274..2765
                     /gene="ilvN"
                     /locus_tag="ACJJDE_001912"
     CDS             2274..2765
                     /gene="ilvN"
                     /locus_tag="ACJJDE_001912"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HGG7541783.1"
                     /translation="MRHILSVLIENESGAMSRVVGLFSARDYNIDSLAVAPTEDKTLS
                     RMTIVTHGDEQVIEQITKQLNKLIEVIKVVDLNESRFVERELMLVKVRAAGKDRDEFL
                     RLTEIYRGSIIDVTDRSYTIEITGSTDKLDSFLETVGRAQILETVRTGAAGIGRGERI
                     LKI"
     gene            2832..3125
                     /locus_tag="ACJJDE_001913"
     CDS             2832..3125
                     /locus_tag="ACJJDE_001913"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HGG7541784.1"
                     /translation="MSNIKIVALVTVKPEYTETLAAQFKELVKASRAEEGNISYDLHQ
                     EIGKPNRFVFVENWKSQAAIDEHNASAHFQAFVQSVDGKTEALEIVLMNEVAD"
     gene            3205..4218
                     /gene="ilvC"
                     /locus_tag="ACJJDE_001914"
     CDS             3205..4218
                     /gene="ilvC"
                     /locus_tag="ACJJDE_001914"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011239815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HGG7541785.1"
                     /translation="MQVYYDKDADLSLIKGKTVAIIGYGSQGHAHAANLKDSGVNVVI
                     GLRQGSSWKKAEAAGHVVKTVAEATKEADVVMLLLPDETMPAVYHAEVTANLKEGATL
                     AFAHGFNVHYNQIVPRTDLDVIMVAPKGPGHTVRSEYKRGGGVPSLIAVYQDNSGKAK
                     DIALSYAAANGGTKGGVIETTFREETETDLFGEQAVLCGGVVELIKAGFETLTEAGYA
                     PEMAYFECLHEMKLIVDLIFEGGIANMNYSISNNAEYGEYVTGPEVVNASSKEAMRNA
                     LKRIQTGEYAKMFIQEGNVNYASMTARRRLNADHQVEKVGAQLRAMMPWITANKLVDQ
                     DKN"
BASE COUNT         1107 a         1021 c         1076 g         1054 t
ORIGIN      
        1 caatatatta agtcgttgtt agccctcttg gttctgtcaa tgccgtccaa tacagtccgg
       61 tgcaatgagc cattttcagg aagtatggtt gggaatattt ttgatatatc aaaaataaaa
      121 tcaagttcaa tcaatatccc gagtctttat tgggatgaaa ccatgtaaat tttacaattc
      181 ttgatatcga agaagggttt ttcacatctg cccctcctgc ataaactgtc aacaatttcc
      241 atctttcaaa aaaggtactc ctgattttat tcttttaaaa tcaatcaata atttctctgc
      301 tttcaaaaaa tattaaaaga tgaaagattt ttcttgattg aactgtcggt ttgcgttatc
      361 gtttctactc tttttcacaa actctgtgtt cctttccaat tgattggata atccgtctgt
      421 tgccgtgttc ccccaatgcg cgtaccctaa atcgctgctt ggtggaattg cattacaggt
      481 gctgtggcaa agcggtttgt ccctattggt ttgaaaccgt ataaaagagg tcgttatgca
      541 gttatcaggc gcgcaaatca tagtgcagag tctcaaagcc gaaggtgtcg agtacgtttt
      601 cggttatccc ggcggtgcgg ttatcgaaat ctacgatgcc cttttccaac tcaataaatt
      661 caagcacatt ctgacccgtc acgagcaggc ggcagtacac gcggcagatg cgtatgcgcg
      721 cgtcagcggt aaggtgggcg tggcattggt tacatccggc ccgggcgtta ccaatgcact
      781 gaccggtatt gctactgcct atacggattc gattccgatg gtggtcatca gcgggcaggt
      841 aggcaattcc ctgattggta cggatgcgtt ccaagaagtt gatacggtgg gtattacccg
      901 tccgtgcgtc aaacacaatt tcctggttac ggacatcaat gagttggcgg aaaccattaa
      961 aaaggcgttc caaattgccg caagcggccg accggggccc gtggtggttg atgtcccgaa
     1021 agatgttacg caggcgatgg cgaaattcag ctatcctcag gaagacattt ttatccgttc
     1081 gtatcaaccg gttgttcaag ggcatatcgg tcagattaaa aaggccgtgc agatgttggc
     1141 atctgccaaa cgtccggtcg tctattttgg cggcggcgtg gtgttgggta atgcttctga
     1201 agagctgacc cgatttgtcc gaatgacggg tgctccgtgc acgggtacgc tgatgggctt
     1261 gggcgcttat ccttccggcg accgccaatt cctcggtatg ctcggtatgc acggtactta
     1321 cgaggcaaac cttgccatgc agaatgcgga tgtcgttctt gccgtaggtg cgcgttttga
     1381 cgaccgtgtg gtttccgtac cgtccaaatt tttcgagaag gcgaagaagg ttatccatat
     1441 cgatgtcgat ccttccagca tcgccaaacg cgtgaaggcg gacattccga ttgtcggcga
     1501 cgtgaaaaac gttttgtccg agatggttgc gctgtggcaa aaacaagagt ccgtgccgtc
     1561 tgaagatgct ttgggcaaat ggtggaaaac catagaggaa tggcgttccc gcgattgctt
     1621 gtggtttgac aacggcagcg aaattatcaa gccacaatat gtgattcaga agcttgccga
     1681 gattaccggc aattcggcaa tcatcacatc ggatgtaggg cagcatcaaa tgtttgcggc
     1741 tcaatattat cccttcgaac gtccgcgcca atggctcaac tccggcggtt tgggtacgat
     1801 gggcgttggt ctgccttatg cgattggtgc aaaacttgcc gccccggatc aagacgtatt
     1861 ctgtattacc ggcgacggct cgatccagat gaacatccaa gagctgtcca cctgtttcca
     1921 atatcggatt ccggttaacg tcattacgct gaacaacggt tatctcggta tggtacgcca
     1981 gtggcaggaa atatattacg gcggccgaga gtcggaaact tatttcgatt ctttgcccga
     2041 tttcgtcaaa cttgccgagg catacggtca tatcggcatc cgcgtggaca agaagtctga
     2101 tgtggaaggt gcgttgttgg aagcattgaa ccaaaaagac aggctggtgt ttatcgactt
     2161 cctgaccgac cagaaacaga atgtgatgcc catggtcggt aacggcaaag gtttggacga
     2221 aatggtactt ccgccgcata tgcgtgcgga cgaaaaggcg taaggagagg caaatgcgac
     2281 atatcttatc tgttctgatt gaaaacgaat caggtgcgat gagccgcgtg gtcggtttgt
     2341 tctctgcacg cgattacaat atcgattctt tggcggttgc gccgaccgaa gacaaaaccc
     2401 tgtcccgtat gaccatcgtt acccacggcg acgagcaggt catcgaacaa atcaccaagc
     2461 aactcaataa attgattgaa gtgattaaag tggtcgattt gaacgaaagc cgttttgtcg
     2521 aacgcgaact gatgttggta aaagtccgtg ccgccggcaa agaccgcgac gaatttttac
     2581 gcttgaccga aatctaccgg ggcagcatca tcgacgtaac cgaccgcagc tatacgattg
     2641 aaattaccgg ctcgacagac aagctggatt cctttttgga aacggtcgga cgcgcccaaa
     2701 ttttggaaac cgtacgcaca ggcgcggccg gcatcggtcg cggtgagcgt attttgaaaa
     2761 tttaacgccg taacctttca gacggcacgg tatttgaatg tcgtctgaaa aacgaacggc
     2821 aggagagatt tatgtcgaac attaaaattg tcgcactggt taccgtcaaa ccggaataca
     2881 cagaaacact ggcagcacag tttaaagaac tggtcaaagc cagccgtgca gaagagggca
     2941 acatcagcta cgatctccat caggaaatcg gcaaaccgaa ccgttttgtt ttcgtggaaa
     3001 attggaaatc tcaagcagct attgacgaac ataacgccag cgcgcatttc caagccttcg
     3061 tccagtccgt cgacggcaaa accgaagcgt tggaaatcgt attgatgaat gaagttgccg
     3121 attaagcggc acactctgtt taacccgtcc gaagccgctc aacattttaa ggcttcgaca
     3181 accatttacc ttaaaggaaa tcaaatgcaa gtctattacg ataaagatgc cgatctgtcc
     3241 ctaatcaaag gcaaaaccgt tgccatcatc ggttacggtt cgcaaggtca tgcccatgcc
     3301 gccaacctga aagattcggg tgtaaacgtg gtgattggtc tgcgccaagg ttcttcttgg
     3361 aaaaaagccg aagcagccgg tcatgtcgtc aaaaccgttg ctgaagcgac caaagaagcc
     3421 gatgtcgtta tgctgctgct gcctgacgaa accatgcctg ccgtctatca cgccgaagtt
     3481 acagccaatt tgaaagaagg cgcaacgctg gcatttgcac acggcttcaa cgtgcactac
     3541 aaccaaatcg ttccgcgtac cgacttggac gtgattatgg ttgcccccaa aggtccgggt
     3601 cataccgtac gcagtgaata caaacgcggc ggcggcgtgc cttctctgat tgccgtttac
     3661 caagacaatt ccggcaaggc caaagacatc gccctgtctt atgcggctgc caacggcggc
     3721 accaaaggcg gtgtgattga aaccactttc cgcgaagaaa ccgaaaccga tctgttcggc
     3781 gaacaagccg tattgtgcgg tggcgtggtc gagttgatca aagcaggttt tgaaaccctg
     3841 accgaagccg gttacgcgcc tgaaatggct tacttcgaat gtctgcacga aatgaaactg
     3901 atcgttgacc tgattttcga aggcggtatt gccaatatga actactccat ttccaacaat
     3961 gcggagtacg gcgaatacgt taccggccct gaagtggtca atgcttccag caaagaagcc
     4021 atgcgcaatg ccctgaaacg catccaaacc ggcgaatacg caaaaatgtt tatccaagag
     4081 ggtaatgtca actatgcgtc tatgactgcc cgccgccgtc tgaatgccga ccaccaagtt
     4141 gaaaaagtcg gcgcacaact gcgtgccatg atgccttgga ttactgccaa caaattggtt
     4201 gaccaagaca aaaactgatt gttttcaaac gggactgcct acacatcgtg taggcagt
//
LOCUS       DBBZXU010000132         4183 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.132, whole genome shotgun sequence.
ACCESSION   DBBZXU010000132 DBBZXU010000000
VERSION     DBBZXU010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.132"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            337..1854
                     /locus_tag="ACJJDE_001915"
     CDS             337..1854
                     /locus_tag="ACJJDE_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002260412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="surface lipoprotein assembly modifier"
                     /protein_id="HGG7541786.1"
                     /translation="MLYFRYGFLVVWCAAGVSAAYGADAPAILDDKALLQVQRLVSDK
                     WAESDWKVENDAPRVVDGDFLLAHPKMLEHSLRDALNGNQADLIASLADLYAKLPDYD
                     AVLYGRARALLAKLAGRPAEAVARYRELHGENAADERILLDLAAAEFDDFRLKSAERH
                     FAEAAKLDLPAPVLENVGRFRKKTEGLTGWRFSGGISPAVNQNANNAAPQYCRQNGGR
                     QICSVSRAERAAGLNYEIEAEKLTALADNHYLLFRSNIGGTSYYFSKKSAYDDGFGRA
                     YLGWQYKNARQTAGILPFYQVQLSGSDGFDAKTKRVNNRRLPPYMLAHGVGVQLSHTY
                     RPNPGWQFSVALEHYRQRYREQDRAEYNNGRQDGFYVSSAKRLGESATVFGGWQFVRF
                     VPKRETVGGAVNNAAYRRNGVYAGWAQEWRQLGGLNSRVSASYARRNYKGVAAFSTEA
                     QRNREWNVSLALSHDKLSYKGIVPALNYRFGRTESNVPYAKRRNSEVFVSADWRF"
     gene            complement(1915..3795)
                     /locus_tag="ACJJDE_001916"
     CDS             complement(1915..3795)
                     /locus_tag="ACJJDE_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate-binding protein"
                     /protein_id="HGG7541787.1"
                     /translation="MPYFALFDDAVSGRAKRYQNHVESRFFRPEELDALDSALQKGWQ
                     KGLHSVLFADYGFGLPLTGVESERGGNLALHWFADCADTDAENWLARHSDGLPAGIST
                     PQSSVSEADYLDHIRQIHEAIRRGDTYQINYTTRLHLQAYGNPISLYRRLRQPVPYAV
                     LSHLPDAEGQSAWTLCFSPELFLNLASDGTISTEPMKGTAPILGDGQDERRAAELQAD
                     PKNRAENVMIVDLLRNDLGKIAQTGKVCVPEPFKVSRFGSVWQMTSTIQAQALPHTSF
                     ADILRAAFPCGSITGAPKKMSMQIIETLETEARGLYTGSIGYLNPCSGGLGFEGTFNV
                     VIRTLSLKPASASDGIVSGIGGPDSNVQARTAGQGEATPYRFQVHPLYQGVYGVGSGI
                     VIDSDPAAEYRECGWKARFLNELRPDFGIFETMRVENRQCALLDRHLCRLKAAAQALN
                     LPLPDGCENQIKQYIADLPDGAFRVKALLASDGISLSRAVLNHLADKQRVIISPAVLP
                     AQNYLRRFKTTHRTLFDQAWQTAETQGAFDSLFFNSDGILLEGGRSNVFVKHRGQWLT
                     PSLDLDILNGIMRQAVLDEPQKYLQTNQVIETHITQKTLQEAEEIRLSNALRGVFAAA
                     LA"
BASE COUNT          873 a          941 c         1354 g         1015 t
ORIGIN      
        1 tttgcgggaa tgacggcgac agggttgctg ttatagcgga ttaacaaaaa ccagtacggc
       61 gttgcctcgc ctcagctcaa agagaacgat tctctaaggt gctgaagcac cgagtgaatc
      121 ggtttcgtac tatttgtact gtctgcggct tcgtcgcctt gtcctgattt ttgttaatcc
      181 gctataaatg tgaaatccgc cctttgaaaa tcgggcggcg gttttttgcc tgcctgcttt
      241 cagacggcaa agccggtttt cacgggtttc tgcctgtttt tcggatggtt tgacgtgctt
      301 cggcggcgtg tttgccagaa aggtaaatga cagggtatgt tgtatttcag atacggtttt
      361 ttggttgttt ggtgtgcggc aggtgtttct gccgcctatg gggcggatgc gcccgcgatt
      421 ttggatgaca aggcattgtt gcaggtgcaa cggttggtgt cggataagtg ggcggaatcg
      481 gattggaaag ttgaaaatga tgccccgcgc gtggttgacg gggatttttt gttggcgcat
      541 ccgaaaatgt tggaacatag tttgcgcgac gcgctcaacg gcaatcaggc ggatttaatc
      601 gcttcgttgg cggatttgta tgccaagctg ccggattatg acgcggtttt gtacggcagg
      661 gcgcgggctt tgctggcgaa attggcggga aggccggcgg aggcggtggc gcggtatcgg
      721 gaactgcacg gggaaaatgc ggcagacgag cggattttgc tggatttggc ggcggcggag
      781 tttgacgatt tccgactgaa gtcggcagaa aggcattttg cggaggcggc aaaattggat
      841 ttgccggcac cggttttgga aaatgtgggg cgttttcgga aaaaaacgga ggggctgacg
      901 ggctggcgtt tttcgggcgg catcagtccg gcggtcaatc aaaacgccaa taatgccgcg
      961 ccgcagtatt gccggcaaaa cggaggccgg cagatatgca gtgtcagccg ggcggagcgg
     1021 gcggcagggt tgaattatga aatcgaggcg gaaaaactga cggcgttggc agataatcat
     1081 tatttgttgt tccgttccaa tatcggcggc acgagctatt atttcagtaa aaaatcagct
     1141 tatgacgacg ggttcggcag ggcgtatttg ggttggcagt ataaaaatgc acggcagacg
     1201 gcggggattt tgccgtttta tcaggtgcag ttgtcgggca gcgacggctt tgatgcgaaa
     1261 acaaaacggg taaacaaccg ccgcctgccg ccgtatatgc tggcgcacgg agtcggcgtg
     1321 cagctgtccc atacttaccg accaaacccg ggatggcaat tttcggtcgc gctggaacat
     1381 taccgccaac gctaccgcga acaggatagg gcggaataca ataacggcag gcaggacggg
     1441 ttttatgttt cgtcggcaaa acgtttgggc gaatcggcaa ctgtgttcgg cggctggcag
     1501 tttgtgcggt ttgtgccgaa acgcgaaacg gtgggcggcg cggtcaataa tgccgcctac
     1561 cggcgcaacg gtgtttatgc cggttgggcg caggagtggc ggcagttggg cggtttgaac
     1621 agtcgggttt ccgcgtctta tgcccgccgc aactataagg gcgttgcggc tttctcgaca
     1681 gaggcgcaac gcaaccgcga atggaatgtc tcgctggctt tgagccacga caagttgtcg
     1741 tataaaggta tcgtgcccgc gttgaattat cgtttcggca ggacggaaag taatgtgccg
     1801 tatgcgaaac gccgcaacag cgaggtgttt gtgtcggcgg attggcggtt ttgaatggtg
     1861 gaataatgcc gtccgaactt tgtggaaaca ggttcggacg gcatttttgc gcgttcaggc
     1921 aagggcggcg gcaaatacgc cgcgcaaggc gttggagagg cggatttctt cggcttcttg
     1981 cagtgttttt tgtgtgatgt gtgtttcgat tacttgattt gtttgcaaat atttttgcgg
     2041 ttcgtccaac acggcttggc gcattatgcc gtttaaaatg tctaaatcta aagagggcgt
     2101 gagccattgt ccgcgatgtt tgacgaacac gttgcttctg ccgccttcga gcaggatgcc
     2161 gtctgaattg aaaaacaggc tgtcgaacgc gccttgtgtt tcggcggttt gccacgcttg
     2221 gtcgaagaga gtgcggtggg tggttttgaa gcggcgcagg tagttttgtg cgggcaggac
     2281 ggcgggcgaa atgatgacgc gttgtttgtc agccaaatgg tttaaaacgg cgcgggacag
     2341 gctgatgccg tctgaagcga gcagggcttt gacgcggaac gcgccgtcgg gcaagtcggc
     2401 aatgtattgt ttgatttgat tttcgcagcc gtcgggcagg ggcaggttga gggcttgggc
     2461 ggcggctttc agacggcata ggtggcggtc gagtagggcg cattgcctgt tttccacgcg
     2521 catggtttca aaaatgccga agtcggggcg caattcgttg aggaaacggg ctttccagcc
     2581 gcattcgcga tattcggcgg cgggatcgct gtcgatgacg atgccggaac cgacgccgta
     2641 caccccttga tagagtggat gaacttgaaa ccggtacggc gttgcctcgc cttgccctgc
     2701 cgttcgggct tgcacgtttg aatctgggcc gccgatgcct gaaacaatgc cgtctgaagc
     2761 cgaagcaggt ttgagcgaca aggtgcggat aacgacgttg aacgtgcctt caaaccccaa
     2821 gccgccggaa cacgggttca aatagccaat gctgcccgta taaagtccgc gcgcttcggt
     2881 ttcgagcgtt tcgataatct gcatactcat ttttttgggc gcgccggtga tgctgccgca
     2941 ggggaaggcg gcgcggagga tgtcggcgaa cgaggtgtgc ggcaaggctt gggcttggat
     3001 ggtgctggtc atctgccaga cgctgccgaa acgcgatact ttaaacggct cgggtacgca
     3061 tactttgccg gtttgggcga ttttgccgag gtcgttgcgc agcaaatcga caatcatcac
     3121 gttttcggcg cggtttttcg ggtctgcttg caactcggcg gcgcggcgtt cgtcttgtcc
     3181 gtcgcccaaa atcggcgcgg tgcctttcat cggttcggtg ctgatggtgc cgtctgaagc
     3241 gaggttgagg aagagttcgg gcgagaaaca cagcgtccac gcggattgcc cctccgcatc
     3301 gggcaggtgg gacaagacgg cataggggac gggctggcgc aggcggcggt agaggctgat
     3361 gggattgccg taggcttgca ggtgcaggcg ggtggtgtag ttgatttgat aggtgtcgcc
     3421 gcgccggatg gcttcgtgga tttggcggat atggtcgagg taatcggctt cggatacgga
     3481 ggattgcggc gtggaaatgc cggcggggag gccgtctgaa tgtcgggcaa gccagttttc
     3541 ggcatcggtg tcggcgcagt cggcaaacca gtgcagggca agattgccgc cgcgttcgga
     3601 ctcgaccccc gtcagcggca aaccgaatcc gtagtctgca aacaacaccg aatgcagccc
     3661 tttttgccag cccttttgca gcgcgctgtc caaagcatcg agttcttcgg gacggaaaaa
     3721 acggctttcc acatgatttt gatagcgttt tgcgcggccg cttacggcat cgtcaaacag
     3781 ggcgaaataa ggcatggcaa ttcggggcaa atgttttgat tatacgctct ttttacacat
     3841 attttcagac gattcggcaa atatcggcaa aatgtaattt tatgtagaga aagtgggggg
     3901 cgaaggtgta aaattgtgaa aacaaattcc gatttccaac ctgaaataca ataaggagac
     3961 ctttatgaca gaccaccagc tgcaaccgtt tgaaaacgta gaattaggcg aaaagcaaga
     4021 ccagctccaa gtatagtgga ttaacaaaaa ccagtacagc gttgcctcgc tttagctcaa
     4081 agagaacgat tctctcaggt gctgaagcac caagtgaatc ggttccgtac tatctgtact
     4141 gtcttcggct tcgttgtctt gtcctgattt ttgttaatcc gct
//
LOCUS       DBBZXU010000133         4181 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.133, whole genome shotgun sequence.
ACCESSION   DBBZXU010000133 DBBZXU010000000
VERSION     DBBZXU010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4181)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4181)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4181
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.133"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            128..1033
                     /gene="glyQ"
                     /locus_tag="ACJJDE_001917"
     CDS             128..1033
                     /gene="glyQ"
                     /locus_tag="ACJJDE_001917"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HGG7541788.1"
                     /translation="MLTFQQIIFKLQTFWADKGCTVIQPFDMEVGAGTSHPATCLRAL
                     GPEPWFAAYVQPSRRPKDGRYGDNPNRLQHYYQFQVALKPAPANIQDLYLDSLRELGI
                     DPKVHDIRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCTPVLGEITY
                     GIERLAMYLQGVENVYDLVWAKTLDGNTVTYGDVYHQNEVEQSTYNFEYSDADWLLRQ
                     FNDYEAQAKRLLAEENAALALPAYELVLKAGHTFNLLDARGAISVTERATYIGRIRAL
                     SRAVAQKYVESREKLGFPLMKANAA"
     gene            1110..1520
                     /locus_tag="ACJJDE_001918"
     CDS             1110..1520
                     /locus_tag="ACJJDE_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosome-binding protein YggL"
                     /protein_id="HGG7541789.1"
                     /translation="MPVYFRTPSRKRLHKMNRRQHKKLHLGEFQTLIFGVQGSLHQAE
                     DDAEAFDRFMDELIAYLAANGLEMAGGGDCGDFSCLFQKSGSRGLGETEKKAIISWLA
                     GREDVATLHATPLVDGFYGDDGWENYSETYKQAD"
     gene            1541..3604
                     /gene="glyS"
                     /locus_tag="ACJJDE_001919"
     CDS             1541..3604
                     /gene="glyS"
                     /locus_tag="ACJJDE_001919"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HGG7541790.1"
                     /translation="MMTQTLLIELLTEELPPKALNNLGNHFAAAVAEGLEKAQLVDGA
                     AEFTAYASPRRLAVQVKNVKAVQADQKIVKKGPAVANAMKDGAPTKALEGFARGAGAK
                     IEDLTIVHDGKQDVYAYEYVQTGKPLGELLEDIINAAVKKLPIPKVMRWGSSTFTFVR
                     PVHGLVVLHGGDIVNVSVLGLQSSNQTLGHRFLSNGEITIENADSYAAQMREQGKVVA
                     SFAERKAAIQTALEGQARRLNASVAADEALLDEVTALVEWPVVLEAGFEEHFLAVPQE
                     CLILTMQQNQKYFPLLDQNGKLMNRFLLVSNLQTEDPSHIIQGNERVLRARLSDAEFF
                     YKQDQKATLESRLPKLANVVYHNKIGSQAERIERLQSIAAHIAKALGADAAAAERAAR
                     LAKADLVTEMVGEFPELQGTMGKYYACLDGETEEIAEAVEQHYQPRFAGDKLPESKIA
                     AAVALADKLETLVGIWGIGLIPTGDKDPYALRRAALGILRMLMQYGLDVNELIQTTFD
                     SFPKGLLNEKTPSETVDFMQARLAVLLQNDYPQDIVAAVLAKQPRRLDDLTAKLQAVA
                     AFKQLPEAAALAAANKRVQNLLKKADAALGEVDESLLQQDEEKALYAAAQGLQPKIAA
                     AVAEGNFQTALSELASVKPQVDAFFDGVMVMAEDAAVKQNRLNLLNRLAEQMNAVADI
                     ALLGE"
     gene            3621..4022
                     /locus_tag="ACJJDE_001920"
     CDS             3621..4022
                     /locus_tag="ACJJDE_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7541791.1"
                     /translation="MPSEAFRRHRAYRENKLQPLVSVLICAYNAEKYFAQSLAAVVNQ
                     TWRNLEILIVDDGSTDGTLAIAKDFQKWDSRIKILAHDRLLNRKQQRRDSPANTFKHR
                     LIRALTKISREREKRRQRREQLIGKIIVPFQ"
     gene            4034..>4181
                     /locus_tag="ACJJDE_001921"
     CDS             4034..>4181
                     /locus_tag="ACJJDE_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010361211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7541792.1"
                     /translation="MDIVFAADDNYAAYLCVAAKSVEAAHPDTEIRFHVLDAGISEAN
                     RAAVA"
BASE COUNT         1072 a         1205 c         1069 g          835 t
ORIGIN      
        1 actggttttt gttaatccac tatatcatgt atgccgtgtt ttcaaatcag tctgtctttg
       61 agataaacct atccaaacag caatggaaac agtaaaataa accctttatt ttatcgaatc
      121 ataagccatg cttaccttcc aacaaatcat cttcaaactg caaacattct gggcagacaa
      181 aggctgcacc gtcatccaac ccttcgacat ggaagtcggt gccggcacat cccatcccgc
      241 cacctgcctg cgcgcactcg gccccgagcc ttggtttgcc gcctacgtcc aacccagccg
      301 ccgccccaaa gacggccgct acggcgacaa ccccaaccgc ctgcaacact attaccaatt
      361 ccaagtcgcc ctcaagcccg ctcccgccaa tatccaagac ctctatctcg actctctgcg
      421 cgaattgggc atcgatccca aagtccacga catccgcttt gtcgaagacg actgggaaaa
      481 ccccaccctc ggcgcgtggg gtttgggctg ggaagtctgg ctcaacggca tggaagtaac
      541 ccagtttacc tatttccaac aagtcggcgg catcgactgc acccccgtac tcggcgaaat
      601 cacctacggc atcgaacgct tggcgatgta cctgcaaggc gtggaaaacg tctatgacct
      661 cgtttgggca aaaacgctgg acggtaatac agtaacttac ggcgacgtgt accaccaaaa
      721 cgaagtcgaa caatccacct acaacttcga atacagcgat gccgactggc tgctgcgcca
      781 gttcaacgac tacgaagcgc aagccaaacg cctgcttgcc gaagaaaacg ccgccctcgc
      841 cctgcctgcc tacgagcttg tcctcaaagc ggggcatacg ttcaaccttt tagacgcacg
      901 cggcgcgatt tccgtaactg agcgggcaac ttatattgga cgtattcgtg cattgagccg
      961 cgccgtggcg caaaaatatg ttgaaagccg cgaaaaactg ggcttccctt taatgaaggc
     1021 aaacgccgcc taagggggcg acgatttttt acgttcgggc ggcacgataa ggcagccgtc
     1081 cggaagccat tatatttttt aggaaaatca tgcctgtcta tttccgcacc ccaagcagga
     1141 aacgcctgca caaaatgaac cgccgccagc ataaaaagct gcatttgggc gagtttcaaa
     1201 cattgatttt cggcgttcaa ggcagtttgc accaagctga ggacgatgcc gaagcgttcg
     1261 accgctttat ggacgagctg attgcgtatc ttgcggcaaa cggcttggaa atggcgggcg
     1321 ggggcgattg cggcgatttt tcgtgcctgt ttcaaaaatc cggctcccga ggcttgggcg
     1381 aaaccgagaa aaaagccatt atctcttggc tggcaggtcg cgaagatgtc gccactttgc
     1441 acgccacccc gctggttgac ggtttttacg gggatgacgg ctgggaaaat tacagcgaaa
     1501 cctataaaca ggcagattaa ccaaattcaa agaaagccga atgatgaccc aaaccctttt
     1561 aatcgaactc cttaccgaag aactcccgcc caaagctctg aataatctgg gcaaccattt
     1621 tgccgccgcc gttgccgaag gcttggaaaa agcgcaactg gttgacggtg cagccgaatt
     1681 tacggcttat gcctcgccgc gccgtttggc ggttcaagtc aaaaacgtta aagccgttca
     1741 ggccgaccaa aaaatcgtga aaaaaggccc tgccgtggcg aatgccatga aagacggtgc
     1801 gccgaccaag gctttggaag gtttcgcacg cggtgcgggc gcgaaaatcg aagacttgac
     1861 catcgtccac gacggcaagc aggacgtgta cgcctacgaa tacgtccaaa ccggcaaacc
     1921 gttgggcgag cttttggaag acattatcaa tgccgcagtg aaaaaactgc cgattccgaa
     1981 agtcatgcgt tggggcagca gcacgtttac ctttgtgcgc cccgttcacg ggctagttgt
     2041 actgcacggc ggcgacatcg taaacgtcag cgttttgggt ctgcaaagca gcaatcaaac
     2101 cttgggacac cgcttcttgt ccaacggcga aatcaccatt gaaaacgccg acagctacgc
     2161 cgcacaaatg cgcgagcaag gcaaagtcgt cgcttcgttt gccgagcgca aagctgcgat
     2221 tcagacggca ttggaagggc aggcacgccg tctgaacgcc tccgttgccg ccgatgaagc
     2281 attgttggac gaagtaaccg cgttggtcga atggcctgtg gtattggaag ccggttttga
     2341 agaacacttc ctcgccgtgc cgcaggaatg cttgattttg acgatgcagc aaaaccaaaa
     2401 atactttccg ctgctcgacc aaaacggcaa gctgatgaac cgcttcctgc tggtttccaa
     2461 cctgcaaacc gaagatccgt cgcacatcat tcaaggcaac gaacgcgtct tgcgcgcgcg
     2521 cctgtctgat gccgagttct tctacaaaca agaccaaaaa gcgactctgg aaagccgcct
     2581 gcccaagctg gcaaacgtgg tgtaccacaa caaaatcggt tcgcaagccg aacgcatcga
     2641 acgtttgcaa agcattgccg cccatattgc caaagcattg ggcgcggatg ccgccgctgc
     2701 cgaacgcgcc gcgcgtcttg ccaaagccga cttggtaacc gaaatggtcg gcgagttccc
     2761 cgaactgcaa ggcacgatgg gcaaatacta tgcctgtttg gacggcgaaa ccgaagaaat
     2821 tgccgaagcc gtcgagcagc actatcagcc gcgttttgcc ggcgacaagc tgcccgaaag
     2881 caaaattgcc gccgccgtgg cactggccga caaactagaa accttggtcg gcatttgggg
     2941 catcggtctg attccgaccg gcgacaaaga cccctacgcc ctgcgccgcg ccgccttggg
     3001 tattttgcgg atgctgatgc agtatggttt ggacgtaaac gagctgattc agacaacctt
     3061 cgacagcttt cccaaaggtt tgctcaacga gaaaacgccg tctgaaaccg tcgactttat
     3121 gcaggcgcgt cttgccgtgt tgctgcaaaa cgattatccg caagacatcg ttgccgccgt
     3181 actcgccaaa cagccgcgcc gtttggacga tttgaccgcc aaactgcaag ccgttgccgc
     3241 tttcaaacaa ctgcccgaag ccgccgcgct cgccgccgcc aacaaacgtg tgcaaaacct
     3301 gctgaaaaaa gccgatgccg cgctgggcga agtcgatgaa agcctgctgc aacaggacga
     3361 agaaaaagcc ctgtacgccg ccgcacaagg cttgcagccg aaaatcgccg ccgccgtcgc
     3421 cgaaggcaat ttccaaaccg ccttgtccga actggcttcc gtcaagccgc aagtcgatgc
     3481 cttctttgac ggcgtgatgg tgatggcgga agatgccgcc gtaaaacaaa accgtttgaa
     3541 cctgttgaac cgtttggcag agcagatgaa cgcggtagcc gacatcgcgc ttttgggcga
     3601 gtaaccgttg tacagtccaa atgccgtctg aagccttcag acggcatcgt gcctatcggg
     3661 agaataaatt gcagccttta gtcagcgtat tgatttgcgc ctacaacgca gaaaaatatt
     3721 tcgcccaatc attagccgcc gtcgtgaatc agacttggcg caacttggag attttgattg
     3781 tcgatgacgg ctcgacagac ggcacacttg ccattgccaa ggattttcaa aagtgggaca
     3841 gccgtatcaa aatccttgca cacgaccgcc tcctgaaccg caaacagcaa aggcgcgatt
     3901 cccccgccaa cacattcaaa caccgcctga tccgcgcctt gaccaaaatc agcagggaaa
     3961 gggaaaaacg tcggcaaagg cgcgaacagt taatcggcaa gatcattgtg cctttccaat
     4021 aaaaggagaa aagatggaca tcgtatttgc ggcagacgac aactatgccg cctatctttg
     4081 cgttgcggca aaaagcgtgg aagcggccca tcccgatacg gaaatcaggt tccacgtcct
     4141 cgatgccggc atcagtgagg caaaccgggc ggcggttgcc g
//
LOCUS       DBBZXU010000134         4170 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.134, whole genome shotgun sequence.
ACCESSION   DBBZXU010000134 DBBZXU010000000
VERSION     DBBZXU010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 4170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4170
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.134"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..107)
                     /locus_tag="ACJJDE_001922"
     CDS             complement(<1..107)
                     /locus_tag="ACJJDE_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541793.1"
                     /translation="MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIE"
     gene            complement(235..1485)
                     /gene="glyA"
                     /locus_tag="ACJJDE_001923"
     CDS             complement(235..1485)
                     /gene="glyA"
                     /locus_tag="ACJJDE_001923"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004520001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HGG7541794.1"
                     /translation="MFSKSVTLAQYDPDLAAAIAQEDQRQQDHVELIASENYVSCAVM
                     ETQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRVKKLFGAQYANVQPHSGSQAN
                     QAVYASVLKPGDTILGMSLAHGGHLTHGASVNISGKLYNAVTYGLDENEVLDYAEVER
                     LALEHKPKMIVAGASAYALQIDWAKFREIADKVGAYLFVDMAHYAGLIAGGEYPNPVP
                     FCDFVTTTTHKTLRGPRGGVILCRDNTHEKALNSSIFPSLQGGPLMHVIAAKAVAFKE
                     ALQPEFKQYAKQVKINAAAMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAA
                     LGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNEADARVLANLVADVLSNPE
                     DEANLAKVREQVTALCNKYPVYGA"
     gene            complement(1640..1903)
                     /locus_tag="ACJJDE_001924"
     CDS             complement(1640..1903)
                     /locus_tag="ACJJDE_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541795.1"
                     /translation="MSNQTKIQAIKQASEQIFAICETPNTALQAIHLILRHGGAGELS
                     WQVVYQRVMADKDVVGAGYLIDFAQTAENLPFDVLPLGSLVLT"
     gene            complement(1966..3741)
                     /gene="ggt"
                     /locus_tag="ACJJDE_001925"
     CDS             complement(1966..3741)
                     /gene="ggt"
                     /locus_tag="ACJJDE_001925"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036374 - glutathione hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HGG7541796.1"
                     /translation="MAKTYLLTALIMSMTISGCQVIHANQGKVNTHSAVITGADAHTP
                     EHATGLIEQKQVIASDFMVASANPLATQAGYDILKQGGSAADAMVAVQTTLSLVEPQS
                     SGLGGGAFVLYWDNTAKTLTTFDGRETAPMRATPELFLDKDGQPLKFMEAVVGGRSVG
                     TPAIPKLMETIHQRYGVLPWGKLFDTPIRLAKQGFEVSPRLAISVEQNQQHLARYPKT
                     AAYFLPNGVPLQAGSLLKNLEFADSVQALAAQGAKALHTGKYAQNIVSVVQNAKDNPG
                     QLSLQDLSDYQVVERPPVCVTYRIYEVCGMGAPSSGGIAVGQILGILNEFSPNQVGYD
                     AEGLRLLGDASRLAFADRDVYLGDPDFVPVPIRQLISKDYLKHRSQLLEQSDKALPSV
                     SAGDFIHEWVSSQAIELPSTSHISIVDKAGNVLSMTTSIENAFGSTLMANGYLLNNEL
                     TDFSFEPIKQGKQVANRVEPSKRPRSSMAPTIVFKAGKPYMAIGSPGGSRIIGYVAKT
                     IVAHSDWNMDIQDAISAPNLLNRFGSYELETGTTALQWQQALNDLGYKTDVRELNSGV
                     QAIIIEPSRLVGGADPRREGRVMGD"
     gene            complement(3909..4170)
                     /locus_tag="ACJJDE_001926"
                     /pseudo
     CDS             complement(3909..4170)
                     /locus_tag="ACJJDE_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007116440.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="glutaredoxin family protein"
BASE COUNT         1041 a          982 c          988 g         1159 t
ORIGIN      
        1 tgttcgatcg gctgccaatc aatcacttga tccaacttca atagtgggaa acggtcgatg
       61 tgtttggcaa tcatggcttg tgcggtttgc tgaaagaagg tgctcatgga acatccccta
      121 aatgtcttgg tgggaattta ggggattttg gggaattttg caaaggtttc cgcctgaaac
      181 attatgagat ttcaggcggc attggattgc ttagcggaat atttttaaaa aggcttacgc
      241 gccgtaaacg gggtatttat tgcacaaagc agttacttgt tcgcggactt tggcgaggtt
      301 ggcttcgtct tcggggttag acaatacgtc ggcaaccaag ttcgccaata cgcgcgcgtc
      361 ggcttcgtta aaaccgcgtg tggtcatggc ggcggaaccg atgcggatgc cggaggtaac
      421 gaagggtttt tccggatcat tcgggatggc gtttttgttg acagtgatgt gcgctttgcc
      481 caaagcagct tcggcggctt tgccggtaat tttcatcggt tgcaggtcaa cgaggaaaac
      541 gtggctttcg gtgcggccgg aaacgatgcg caaaccgcgt ttaaccaact cttccgccat
      601 ggcggctgca ttgattttca cttgttttgc gtattgtttg aactcgggtt gcaatgcttc
      661 tttaaacgcc acggctttgg cggcgataac gtgcatcagc gggccgcctt gcaggcttgg
      721 gaagatggaa gagttcaacg ctttttcgtg ggtattgtcg cggcacaaaa ttacgccgcc
      781 gcgaggaccg cgcagggttt tgtgggtggt ggtggtaacg aagtcgcaga atggcaccgg
      841 gttgggatat tcgccaccgg caatcagtcc ggcgtagtgc gccatgtcga caaagaggta
      901 tgcgccgact ttatcggcga tttcgcggaa ttttgcccag tcgatttgca acgcgtaggc
      961 agacgcaccc gccacaatca ttttgggttt gtgttcgagc gcgaggcgtt cgacttcggc
     1021 ataatcgagc acttcgtttt catccaaacc ataagtaacg gcattgtaga gtttgcctga
     1081 gatattaacg ctcgcgccgt gggtcaggtg gccgccgtgc gccagagaca tacccaaaat
     1141 ggtgtcgcct ggttttaaaa cggaagcgta cacggcttgg ttggcttgcg agccggagtg
     1201 cggttggacg ttggcgtact gcgcgccgaa cagttttttg acgcggtcaa tcgccaattg
     1261 ttcgacaata tcgacgtatt cgcagccgcc gtagtagcgt ttgccggggt agccttcggc
     1321 gtatttgttg gtcagctggg aaccttgcgt ttccattacg gcgcagctga cgtagttttc
     1381 agaggcaatc agctcgacgt ggtcttgctg gcgttggtct tcttgggcaa tggctgctgc
     1441 caaatcgggg tcatattgtg cgagggtaac gctttttgaa aacatgttct cggctccttt
     1501 gtgtaatcag ggtatcatga gtgttttttg tataaaaaaa tacttcaaaa cctaaggcag
     1561 atagtccata atgcgtaaat tttctttggc attatcaggt aatttattta acatgctggt
     1621 ttttagcgtc tcattacctt tatgttagta caaggctacc caaaggcaat acatcaaatg
     1681 gtaaattttc ggcagtttgt gcaaaatcaa tcaaataacc agcaccaacc acatctttat
     1741 cagccataac ccgctgatac accacttgcc aagacaactc tcctgcccca ccatgtctta
     1801 aaatcagatg aatggcttgt aatgctgtgt ttggcgtctc acaaattgcg aagatctgct
     1861 cagaagcttg cttgatggct tgtatttttg tttgattact cacaatttcc ccctatttta
     1921 atattaactt aatgcggtca aattcacaaa atacaagctt cacctctaat cacccatcac
     1981 tcgaccttct cggcgtggat cggcaccacc aaccagcctg cttggctcga taataatggc
     2041 ttgaacacct gaatttagct cacgcacgtc agtcttatag cccaaatcat ttaatgcttg
     2101 ttgccactgg agggcggttg tacccgtttc tagttcatag ctaccaaagc gatttaataa
     2161 attgggtgca ctgatggcat cttggatatc catattccag tcgctatgtg ccacaatcgt
     2221 cttagcgaca tagccaatga tacggctacc acctggggag ccgattgcca tataaggctt
     2281 gcctgcttta aatacgatgg ttggtgccat tgaggagcgt ggtctcttgc tgggctcgac
     2341 acgattggcg acctgtttgc cctgctttat tggctcaaaa ctaaagtctg tcagctcatt
     2401 attcagcagg tagccatttg ccatcaaagt tgagccaaac gcattttcaa tggaagtcgt
     2461 cattgatagc acattgcccg ccttatccac aattgatata tgactggtag aaggtaactc
     2521 aatcgcttgt gaggacaccc actcatgaat aaaatcgcct gcagatacgc taggcaatgc
     2581 cttatccgac tgctcaagca gctggctgcg atgttttagg tagtctttag aaatcaactg
     2641 gcgaatgggt actggtacaa aatcagggtc gcccaaatat acatcacgat ccgcaaacgc
     2701 aagcctagaa gcgtcgccca agagacgtaa accttcagca tcatacccca cctgattggg
     2761 tgaaaattca tttaaaatcc ccaaaatttg acccacagca atcccacctg agcttggtgc
     2821 acccataccg catacttcat aaatacgata agtcacacaa acaggcgggc gttccaccac
     2881 ttgataatca gataaatctt gtaaggataa ttgaccgggg ttatccttag cattttggac
     2941 aactgaaacg atattttggg catatttacc agtatgcaga gcttttgcac cttgagctgc
     3001 taacgcctga acactgtcag caaattctaa atttttcagc aagctgcctg cttgtagcgg
     3061 cacaccattc ggcaaaaaat aagcggctgt ttttggatag cgtgccaaat gctgctgatt
     3121 ttgctcaacc gagatggcaa gccttggcga cacctcaaag ccttgttttg ccaagcggat
     3181 cggtgtatca aataattttc cccaaggcaa tacaccgtat cgctgatgta ttgtctccat
     3241 cagtttaggg atagcaggcg tacccaccga gcgaccaccg accaccgctt ccataaattt
     3301 caatggttga ccatctttat ccaaaaataa ttccggcgtc gcacgcatcg gtgccgtctc
     3361 acgcccatca aatgtggtca atgttttggc ggtattatcc caatacaaca caaatgcacc
     3421 accgcccaag cctgacgact gtggctctac caagcttagt gtcgtctgca ccgccaccat
     3481 cgcatctgca gcgctaccgc cttgctttaa gatatcatag ccagcttgtg ttgctaatgg
     3541 attggctgac gctaccataa aatcacttgc aatcacctgc ttttgttcga tcagtcccgt
     3601 tgcatgttca ggcgtgtgag cgtctgcacc tgtgatgaca gcagaatgag tattaacctt
     3661 accttgattg gcatggatga cttgacatcc agagattgtc atagacatta tcaatgcagt
     3721 caataaatat gttttagcca caagcactcc ttcgcctgag tttgattgat gattcataca
     3781 aggcatgctg attattgtat ttaatatggc taaataattc aatccaaact atcaatcttg
     3841 accatcaaaa aaagaccgct aatgtcatca gcagtctttt ttgatattta ttttaagata
     3901 ttaagtaatc agacctttgg gctatgctct tcaatgagtg gttttagctc acctgattgg
     3961 tacatttgta ggataatatc actaccaccg attaactcac cattaaccca aagctgtgga
     4021 aaggttggcc gattggcgat gagtggtaga gtactgcgaa tttctgggtt ttctaggata
     4081 ttaacaaaag caaagggtct gccaattggg tcagcacctc tactgcacgc gctgaaaatc
     4141 cacattgggg aaactggggc gtgcctttca
//
LOCUS       DBBZXU010000135         3925 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.135, whole genome shotgun sequence.
ACCESSION   DBBZXU010000135 DBBZXU010000000
VERSION     DBBZXU010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3925)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3925)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3925
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.135"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..751
                     /locus_tag="ACJJDE_001927"
     CDS             <1..751
                     /locus_tag="ACJJDE_001927"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 8 protein"
                     /protein_id="HGG7541797.1"
                     /translation="DVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDV
                     LVRDSLTPLWDTDLGDNWLGACIDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKKW
                     RRHDIFKMSCEWVEQYKDVMQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANRFA
                     SRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEEWRG
                     KLAVPHRMFSTKRMLQRWRRKLSARFLRKIY"
     gene            811..1820
                     /locus_tag="ACJJDE_001928"
                     /pseudo
     CDS             811..1820
                     /locus_tag="ACJJDE_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223083.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
     gene            1839..2666
                     /locus_tag="ACJJDE_001929"
     CDS             1839..2666
                     /locus_tag="ACJJDE_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7541798.1"
                     /translation="MQNHVISLASAAERRAHIADTFGAHDIPFQFFDALMPSEALEQA
                     MAELVPGLSAHPYLSGVEKACFMSHAVLWKQALDEGLPYIAVFEDDVLLGEGAEKFLA
                     EDAWLKERFDPDSAFIVRLETMFMHVLTSPSGVADYCGRAFPLLESEHWGTAGYIISK
                     KAIRFFLQHFVMLQPEQIKPIDLMMFSDFFDKEGMPVYQVSPALCAQELHYAKFHDQN
                     SALGSLIEHDRLLNRKQQRRDSPANTFKRRLIRALTKISREREKRRQRREQFIVPFQ"
     gene            2678..2773
                     /locus_tag="ACJJDE_001930"
                     /pseudo
     CDS             2678..2773
                     /locus_tag="ACJJDE_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233115.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
     gene            2815..3657
                     /locus_tag="ACJJDE_001931"
     CDS             2815..3657
                     /locus_tag="ACJJDE_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014574248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 25 protein"
                     /protein_id="HGG7541799.1"
                     /translation="MQNHVISLASAAERRAHIADTFGRHDIPFQFFDALMPSEELNRV
                     MAELVPGLAKQHLLSEVEKACFMSHAVLWKQALDEGLPYVAVFEDDVLLGKDAEKFLA
                     EDTWLEERFDKDSAFIVRLETMFAKVIVRPDKVLNYENRSFPLLESEHWGTAGYIISR
                     EAMRFFLERFAVLPAEWIKAVDWMMFTYFFDKEGMPVYQVNPALCTQELHYAKFLSKN
                     SMLGSDLEKDREQERRHRRSLKVMFDLKRALGKFGREKKKRMERQRQAELEKAYGRRV
                     ISFK"
BASE COUNT         1043 a          919 c         1035 g          928 t
ORIGIN      
        1 agacgtaaac cccgaagatt tcgccggctt ccccttaaac atcaggcaca tttccattac
       61 gacttatgcc cgcctgaaat tgggcgaata cattgccgat tgcgataaag tcctgtatct
      121 ggatatagac gtattggtca gggacagcct gacgccctta tgggataccg atttgggcga
      181 taactggctt ggcgcgtgca ttgatttgtt tgtcgaaagg caggaaggct acaaacaaaa
      241 aatcggtatg gcggacggcg aatattattt caatgccggc gtattgctga tcaacctgaa
      301 aaagtggcgg cggcacgata ttttcaaaat gtcctgcgaa tgggtggaac aatacaagga
      361 cgtgatgcaa tatcaggatc aggacatttt gaacgggctg tttaaaggcg gggtgtgtta
      421 tgcgaacagc cgtttcaact ttatgccgac caattatgcc tttatggcga acaggtttgc
      481 gtcccgccat accgacccgc tttaccgcga ccgtaccaat acggtgatgc ccgtcgccgt
      541 cagccattat tgcggcccgg caaagccgtg gcacagggac tgcaccgcgt ggggtgcgga
      601 acgtttcaca gagttggcgg gcagcctgac gaccgttccc gaagaatggc gcggcaaact
      661 tgccgtcccg caccgtatgt tttcgacaaa gcgtatgctt caaagatggc gcagaaagct
      721 gtctgccaga ttcttacgca agatttattg acggggcagg ccgtctgaag ccttcagacg
      781 gcatcggatg tgtcggaaag gagaaacgga ttgcaacctt tagtcagcgt attgatttgc
      841 gcctacaacg cagaaaaata tttcgcccaa tcattagccg ccgtcgtgaa tcagacttgg
      901 cgcaacttgg agattttgat tgttgatgac ggctcgacgg acggcacgcc ctccattgcc
      961 cggcgtttcc aagaacagga cggcaggatt aggataattt ccaatccccg caatttgggc
     1021 tttatcgcct ctttaaacat cgggctggac gaattggtaa agtcgggggg ggatatattg
     1081 cgcgcaccga tgccgacgat attgccgccc ccggctggat tgaaaaaatc gtgggcgaga
     1141 tggaaaaaga cgcggatatt gccgcgatgg gttcctattt ggagattttg gcggaagaaa
     1201 acaataaaag cgtgcttgcc gccattgccc gaaacggcga aatttggaaa aaccccctga
     1261 cccatcagga aatcacgtct gccttccccc tccgcaaccc catacacaac aacacgatga
     1321 ttatgcggcg cagcgtcatt gacggcggtt tgcggttcga tcccgcctat atccacgccg
     1381 aagactataa gttttggtac gaagccggca aattgggcag gctggcgaat taccccgaag
     1441 ccttggtcaa ataccgtttc catcaagacc agacttcttc caaacacaac ctgcaacagc
     1501 gtaagacggc gtggaaaatc aaagaagaaa tcagggcggg gtattggaag gcggcaggca
     1561 taaccgtcgg gtcggactgc ctgaattacg ggcttttgaa atcaacggca tatgcgttgc
     1621 acgaaaaagc cttgtccgga caggatatcg gatacctccg cctgttcctg tacgaatatt
     1681 tcttgtcgtt ggaaaagtat tctttgaccg atttactgga ttttctgaca gaccgcgtga
     1741 tgaggaagct gtttgccgca ccgcaatata ggaaaatcct gaaaaaaatg ttacgccctt
     1801 ggaaataccg gggctattga aaccgaacag ggaaaatcat gcaaaaccac gttatcagct
     1861 tagcttccgc cgcagaacgc agggcgcaca ttgccgatac cttcggcgcg cacgacattc
     1921 cgtttcagtt tttcgacgca ctgatgccgt ctgaagcact ggagcaggca atggcggaac
     1981 tcgtacccgg tttgtcggcg cacccctatt tgagcggagt ggaaaaagcc tgctttatga
     2041 gccacgccgt attgtggaaa caggcattgg acgaaggtct gccgtatatc gccgtatttg
     2101 aggacgacgt tttactcggc gaaggcgcgg agaaattcct tgccgaagac gcttggctaa
     2161 aagaacgctt tgaccccgat tccgccttta tcgtccgctt ggaaacgatg tttatgcacg
     2221 tcctgacctc gccctccggt gtggcggact actgcgggcg tgcctttccg ctgttggaaa
     2281 gcgaacactg ggggacggcg ggctatatca tttccaaaaa agcgatacgg tttttcctgc
     2341 aacatttcgt aatgttgcag ccggaacaga taaaacctat cgacttaatg atgttcagtg
     2401 attttttcga taaggagggg atgcctgttt atcaggtcag tccggcctta tgcgcccaag
     2461 agctgcatta tgccaagttt cacgaccaaa acagcgcatt gggcagcctg atcgaacacg
     2521 accgcctcct gaaccgcaaa cagcaaaggc gcgattcccc cgccaacaca ttcaaacgcc
     2581 gcctgatccg cgccttgacc aaaatcagca gggaaaggga aaaacgccgg caaaggcgcg
     2641 aacagttcat tgtgcctttc caataaaagg aggagagatg gacatcgtat ttgcagcaga
     2701 cggcaggatg cggcggctgt ttaccttgag gcaatacttc ggcattttgc gccgattgct
     2761 gaaaaaccgt tgaaaaacgc cgctttatcc aacagacaaa aaacaggata aattatgcaa
     2821 aaccacgtta tcagcttagc ttccgccgca gaacgcaggg cgcacattgc cgataccttc
     2881 ggcaggcacg acattccgtt tcagtttttc gacgcactga tgccgtctga agaactgaat
     2941 cgggtgatgg cggaattggt gccgggattg gcaaaacagc acctgttgag cgaagtggaa
     3001 aaagcctgct ttatgagcca cgccgtattg tggaaacagg cattggatga aggtctgccc
     3061 tatgttgccg tatttgagga tgatgtcctg cttggcaaag acgcagaaaa gttccttgcc
     3121 gaagatactt ggttggaaga gcgttttgat aaggattctg cctttatcgt tcgtttggaa
     3181 acgatgtttg cgaaagttat tgtcagaccg gataaagtcc tgaattatga gaaccggtca
     3241 tttcctttgc tggagagcga acattggggg acggctggct atatcatttc gcgtgaggcg
     3301 atgcggtttt tcttggaaag gtttgccgtt ttgccggcag agtggattaa agcggtagat
     3361 tggatgatgt ttacttattt ctttgataag gaggggatgc ctgtttatca ggttaatccc
     3421 gccttatgta cccaagaatt gcattatgcc aagttcctca gtaaaaacag tatgttgggt
     3481 agcgatttgg aaaaagatag ggaacaagaa agaagacacc gccgttcgtt gaaggtgatg
     3541 tttgacttga agcgtgcttt gggtaaattc ggtagagaaa agaagaaaag aatggagcgt
     3601 caaaggcagg cggagcttga gaaagcttac ggcaggcggg tcatatcgtt caaatagttt
     3661 gtgtaaaata tagcggatta aaattagaaa tggatacact gtcattcccg cgaaagtggg
     3721 aatccagtcc gttgagtttc agtcatttcc gataaatcac cgcaacgtta aatttctaga
     3781 ttcccgcttt tgcgggaatg acggcggggg atttctgttt ttccgacaaa ttcctaaaac
     3841 ttaaaattcc gttattcccg cgaaaacaga aaaccaaaaa cagaaaccta aaatctcgtc
     3901 attcccgcaa aaacagaaaa ccaaa
//
LOCUS       DBBZXU010000136         3865 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.136, whole genome shotgun sequence.
ACCESSION   DBBZXU010000136 DBBZXU010000000
VERSION     DBBZXU010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3865
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.136"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            418..3621
                     /gene="nalP"
                     /locus_tag="ACJJDE_001932"
     CDS             418..3621
                     /gene="nalP"
                     /locus_tag="ACJJDE_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endopeptidase autotransporter NalP"
                     /protein_id="HGG7541800.1"
                     /translation="MRTTPTFPTKTFKPAAMALAVATTLSACLGGGGGTSAPDFNAGG
                     TGIGSNSRATTAKSAAVSYAGIKNEMCKDRSMLCAGRDDVAVTDRDAKINAPPPNLHT
                     GDFTNPNDAYKNLINLKPAIEAGYTGRGVEVGIVDTGESVGSISFPELYGRKEHGYNE
                     NYKNYTAYMRKEAPEDGDGKDIEASFDDEAVIETEAKPTDIRHVKEIGHIDVVSHIIG
                     GRSVDGRPAGGIAPDATLHIMNTHDGTKNEIMSAAIRNAWVKLGERGVRIVNNSFGTT
                     SRAGTADHFQIANSEEQYRQALLAYSGGDKTDEGIRLMQQSDYGNLSYHIRNKNMLFI
                     FSASNDAQAQPNTLTLLPFYEKDAQKGIITVAGVDRSGEKFNGSNHCGITAMWCLSAP
                     YEASVRFTRTNPIQIAGTSFSAPIVTGTAALLLQKYPWMSNDNLRTTLLTTAQDIGAV
                     GVDSKFGWGLLDAGKAMNGPASFPFGDFTADTKGTSDIAYSFRNDISGTGGLIKKGGS
                     QLQLHGNNTYTGKTIIEGGSLVLYGNNKSDMRVETKGALIYNGAASGGSLNSDGIVYL
                     ADTDRSGANETVHIKGDLQLGGEGTLYTRLGKLLKVDGTAMTGGKLYMSARGKGAGYL
                     NRTGQRVPFLSAAKIGRDYSFFTNIETDGGLLASLDSVEKTAGSEGDTLSYYVRRGNA
                     ARTASAAAHSAPAGLKHAVEQGGSNLENLMVELDASESSATPETVETAAADRTDMPGI
                     RPYGATFRAAAAVQHANAADGVRIFNSLAATVYADSTAAHADMQGRRLKAVSDGLDHN
                     GTGLRVIAQTQQDGGTWEQGGVEGKMRGSTQTVGIAAKTGENTTAAATLGMGRSTWSE
                     NSANAKTDSISLFAGIRHDAGDIGYLKGLFSYGRYKNSISRSTGADEHAEGSVNGTLM
                     QLGALGGVNVPFAATGDLTVEGGLRYDLLKQDAFAEKGSALGWSGNSLTEGTLVGLAG
                     LKLSQPLSDKAVLFATAGVERDLNGRDYTVTGGFTGATAATGKTGARNMPHTRLVAGL
                     GADVEFGNGWNGLARYSYAGSKQYGNHSGRVGVGYRF"
BASE COUNT         1054 a         1049 c         1025 g          737 t
ORIGIN      
        1 tagcggatta acaaaaatca ggacaagaca acgaagccga agacagtaca gatagtacgg
       61 aaccgattca ctcggtgctt cagcacctta gagaatcgtt ctctttgagc taaggcgagg
      121 caacgccgta ctggtttttg ttcatccact ataactaggg aaattcaaat taagttagaa
      181 ttatccctat gagaaaaagc cgtctaagcc ggtataaaca aaataaactc attgagctat
      241 ttgtcgaaag ttcaaatttc cattttaaaa caattagtaa aatcgagttt atcctagttg
      301 tccaagacaa cccctataat aatataattc aaaatataaa aacgggttac atctaaacat
      361 tacggaattt ttattccctc gcctgaattc tattgtcaga ttcaaggaga cctcatcatg
      421 cgaacgaccc caaccttccc tacaaaaact ttcaaaccgg ctgccatggc gttagctgtt
      481 gcaacaacac tttctgcctg cttaggcggc ggcggcggca cttctgcgcc cgacttcaat
      541 gcaggcggca ccggtatcgg cagcaacagc agagcaacaa cagcgaaatc agcagcagta
      601 tcttacgccg gtatcaagaa cgaaatgtgc aaagacagaa gcatgctctg tgccggtcgg
      661 gatgacgttg cggttacaga cagggatgcc aaaatcaatg cccccccccc gaatctgcat
      721 accggagact ttacaaaccc aaatgacgca tacaagaatt tgatcaacct caaacctgca
      781 attgaagcag gctatacagg acgcggggta gaggtaggta tcgtcgacac aggcgaatcc
      841 gtcggcagca tatcctttcc cgaactgtat ggcagaaaag aacacggcta taacgaaaat
      901 tacaaaaact atacggcgta tatgcggaag gaagcgcctg aagacggaga cggtaaagac
      961 attgaagctt ctttcgacga tgaggccgtt atagagactg aagcaaagcc gacggatatc
     1021 cgccacgtaa aagaaatcgg acacatcgat gtggtctccc atattattgg cgggcgttcc
     1081 gtggacggca gacctgcagg cggtattgcg cccgatgcga cgctacacat aatgaatacg
     1141 catgatggaa ccaagaacga aataatgtct gcagccatcc gcaatgcatg ggtcaagctg
     1201 ggcgaacgtg gcgtgcgcat cgtcaataac agttttggaa caacatcgag ggcaggcact
     1261 gccgaccatt tccaaatagc caattcggag gagcagtacc gccaagcgtt gctcgcctat
     1321 tccggcggtg ataaaacaga cgagggtatc cgcctgatgc aacagagcga ttacggcaac
     1381 ttgtcctacc acatccgtaa taaaaacatg cttttcattt tttcggcaag caatgacgca
     1441 caagctcagc ccaacacact gaccctattg ccattttatg aaaaagatgc tcaaaaaggc
     1501 attatcacag tcgcaggcgt agaccgcagt ggagaaaagt tcaatggctc caaccattgc
     1561 ggaattactg ccatgtggtg cctatcggca ccctatgaag caagcgtccg tttcacccgt
     1621 acaaacccga ttcaaattgc cggaacatcc ttttccgcac ccatcgtaac cggcacggcg
     1681 gctctgctgc tgcagaaata cccgtggatg agcaacgaca acctgcgtac cacgctgctg
     1741 acaacggctc aggacatcgg tgcagtcggc gtggacagca agttcggctg gggactgctg
     1801 gatgcgggta aggccatgaa cggacccgcg tcctttccgt tcggcgactt taccgccgat
     1861 acgaaaggta catccgatat tgcctactcc ttccgtaacg acatttcagg cacgggcggc
     1921 ctgatcaaaa aaggcggcag ccaactgcaa ctgcacggca acaacaccta tacgggcaaa
     1981 accattatcg aaggcggttc gctggtgttg tacggcaaca acaaatcgga tatgcgcgtc
     2041 gaaaccaaag gtgcgctgat ttataacggg gcggcatccg gcggtagcct gaacagcgac
     2101 ggcattgtct atctggcaga taccgaccga tccggcgcaa acgaaaccgt gcacatcaaa
     2161 ggcgatctgc agctgggcgg cgaaggtacg ctgtacacac gtttgggcaa actgctgaaa
     2221 gtggacggta cggcgatgac cggcggcaag ctgtacatgt cggcacgcgg caaaggggca
     2281 ggctatctca accgtaccgg acaacgtgtt cccttcctga gtgccgccaa aatcgggcgg
     2341 gattattctt tcttcacaaa catcgaaacc gacggtggtc tgctggcttc cctcgacagc
     2401 gtcgaaaaaa cagcgggcag tgaaggcgac acgctgtcct attatgtccg tcgcggcaat
     2461 gcggcacgga ctgcttcggc agcggcacat tccgcgcccg ccggtctgaa acacgccgta
     2521 gaacagggcg gcagcaatct ggaaaacctg atggtcgaac tggatgcctc cgaatcatcc
     2581 gcaacacccg agacggttga aactgcggcc gccgaccgca cagatatgcc gggcatccgc
     2641 ccctacggcg caactttccg cgcagcggca gccgtacagc atgcgaatgc cgccgacggt
     2701 gtacgcatct tcaacagtct cgccgctacc gtctatgccg acagtaccgc cgcccatgcc
     2761 gatatgcagg gacgccgcct gaaagccgta tcggacgggt tggaccacaa cggcacgggt
     2821 ctgcgcgtca tcgcgcaaac ccaacaggac ggtggaacgt gggaacaggg cggtgttgaa
     2881 ggcaaaatgc gcggcagtac ccaaaccgtc ggcattgccg cgaaaaccgg cgaaaatacg
     2941 acagcagccg ccacactggg catgggacgc agcacatgga gcgaaaacag tgcaaatgca
     3001 aaaaccgaca gcattagtct gtttgcaggc atacggcacg atgcgggcga tatcggctat
     3061 ctcaaaggcc tgttctccta cggacgctac aaaaacagca tcagccgcag caccggtgcg
     3121 gacgaacatg cggaaggcag cgtcaacggc acgctgatgc agctgggcgc actgggcggt
     3181 gtcaacgttc cgtttgccgc aacgggagat ttgacggtcg aaggcggtct gcgctacgac
     3241 ctgctcaaac aggatgcatt cgccgaaaaa ggcagtgctt tgggctggag cggcaacagc
     3301 ctcactgaag gcacactggt cggactcgcg ggtctgaagc tgtcgcaacc cttgagcgat
     3361 aaagccgtcc tgtttgcaac ggcgggcgtg gaacgcgacc tgaacggacg cgactacacg
     3421 gtaacgggcg gctttaccgg cgcgactgca gcaaccggca agacgggggc acgcaatatg
     3481 ccgcacaccc gcctggttgc cggtctgggc gcggatgtcg aattcggcaa cggctggaac
     3541 ggcttggcac gttacagcta cgccggttcc aaacagtacg gcaaccacag cggacgagtc
     3601 ggcgtaggct accggttctg acggacagga agcagacagc cgcaaagatc acggtctttg
     3661 cggctgtttc ttatgaaaag aaaaccctat tccaattgcc tgcttctatt gtttcaagac
     3721 ttcttccaaa gattcggcat caatcagatg tatagcggat taacaaaaat caggacaagg
     3781 cggcgaagcc gcagacagta caaatagtac ggaaccgatt cactcggtgc ttgagcacct
     3841 tagagaatcg tttctttgag ctaag
//
LOCUS       DBBZXU010000137         3860 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.137, whole genome shotgun sequence.
ACCESSION   DBBZXU010000137 DBBZXU010000000
VERSION     DBBZXU010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3860
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.137"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            490..1446
                     /gene="thiL"
                     /locus_tag="ACJJDE_001933"
     CDS             490..1446
                     /gene="thiL"
                     /locus_tag="ACJJDE_001933"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HGG7541801.1"
                     /translation="MKEFDFIKRYLQTGTDKDVVLGIGDDAAIVRPREGFDLCFSADM
                     LLKDRHFFADVKPEDLAWKVLAVNISDMAAMGAIPRWVLLSAALPELDEVWLERFCGS
                     FFGLAKKFGVTLIGGDTTKGDMAFNVTIIGELPKGRALRRDAAVAGDDIWVSGRVGMA
                     AAALNCRLKRCVLPDDVFAECEQKLLRPEPRVGLGLALLPFARAAQDVSDGLAQDLGH
                     ILTASGVGAEIWADSLPSLSVLKDILPRAQWLSYTLAGGDDYELVFTAPESCRSRVLD
                     AAERCGVPVTRIGKINGGCRLKVLDADGRELELHSLGFDHFG"
     gene            1439..1924
                     /locus_tag="ACJJDE_001934"
     CDS             1439..1924
                     /locus_tag="ACJJDE_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HGG7541802.1"
                     /translation="MADFKPDFAWLLKRPLCFLAFGFGSGLAPFAPGTFGTLAALPLA
                     FVLILLGIDGLLLAFLCIVLFMWGIRICAYAERETGVSDHGGIVWDEIVAMLFVLAFV
                     PFRWTWWLAAFVLFRLFDALKPSPVGWFDKNLHGGLGIMADDMAAAVMTLIVLRIAML
                     F"
     gene            complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACJJDE_001935"
     CDS             complement(1984..3660)
                     /gene="ettA"
                     /locus_tag="ACJJDE_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002232796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HGG7541803.1"
                     /translation="MSQQYVYSMLRVSKVVPPQKTIIKDISLSFFPGAKIGLLGLNGA
                     GKSTVLRIMAGVDKEFEGEAVPMGGIKIGYLPQEPELDPEKTVREEVESGLGEVAAAQ
                     KRLEEVYAEYANPDADFDALAEEQGRLEAIIAAGSSTGGGAEHELEIAADALRLPDWD
                     AKIGNLSGGEKRRVALCKLLLSKPDMLLLDEPTNHLDAESVEWLEQFLVRFPGTVVAV
                     THDRYFLDNAAEWILELDRGHGIPWKGNYSSWLEQKEKRLENEAKSEAARVKAMKQEL
                     EWVRQNAKGRQAKSKARLARFEEMSNYEYQKRNETQEIFIPVAERLGNEVIEFVNVSK
                     SFGDKVLIDDLSFKVPAGAIVGIIGPNGAGKSTLFKMIAGKEQPDSGEVKIGQTVKMS
                     LIDQSREGLQNDKTVFDNIAEGRDILQVGQFEIPARQYLGRFNFKGSDQSKITGQLSG
                     GERGRLHLAKTLLGGGNVLLLDEPSNDLDVGTLRALEDALLEFAGSVMVISHDRWFLD
                     RIATHILACEGDSKWVFFDGNYQEYEADKKRRLGEEGTKPKRIKYKPVTR"
BASE COUNT          786 a          937 c         1077 g         1060 t
ORIGIN      
        1 gaggcaacgc tgtactggtt taaatttaat ccactatatc ggttgaaact ctgattttaa
       61 ggcggtagga tgtgggtttg cccatagaaa gggaatcctt tctgtatcaa gccctgaaag
      121 ggataattca tacaaattca cgcctttccc cttcattggg aaatggatgg aatcgtgcca
      181 gatgtgtgcg gcactgtatg ccggatatgg ttttatcatc agcccttttc ggttgaaacc
      241 ccgtcagttg cagcgattga gcctaatcgg tggcggaagt tgccgctttg cattcggggt
      301 ggcgtgcagt gcggtgcttt gatatgccgt ttgtgtgttg aaacagggtg gtcggtgcat
      361 acgggtacgg tatggccaaa gctaaaagtg aaatacgctg aaacactgaa tgagccgctt
      421 tattgtttgt acggcctttg ctgccttgct atgatttaaa ttggattcgc ccgccggata
      481 ttttgggata tgaaagaatt tgacttcatc aaacggtatt tgcaaacagg cacggataag
      541 gatgtcgtat tgggcatagg cgacgatgcg gcgattgtcc gcccgcgtga aggcttcgat
      601 ttgtgtttca gtgcggatat gcttttgaag gacaggcatt tttttgccga tgtcaaacct
      661 gaggacttgg cttggaaggt tttggccgtc aatatttcag atatggcggc gatgggcgcg
      721 ataccgcgtt gggtgttgtt aagtgcggct ttgcccgaat tggatgaggt atggctggaa
      781 cggttttgcg gcagcttttt cggtttggca aaaaagtttg gcgtaacgtt aatcggcggc
      841 gatacgacca agggcgatat ggcgttcaat gtaaccatta tcggcgaatt gccgaagggt
      901 agggcattgc ggcgtgatgc ggcggttgcg ggcgacgata tttgggtgtc ggggcgtgtc
      961 ggtatggcgg cggcggcttt gaactgccgt ctgaaacggt gtgtgttgcc ggatgatgtg
     1021 tttgccgaat gcgaacaaaa gctgctccgc cccgagccaa gggttgggct ggggcttgcg
     1081 ctgttgccgt ttgcccgggc ggcgcaggat gtttcagacg gcctcgcgca agatttgggg
     1141 catatcctga ccgcttccgg cgtgggggcg gaaatttggg ccgattcgct gccgtcttta
     1201 tccgtattga aagatatttt gccccgagcg caatggctgt cttatacttt ggcgggcggc
     1261 gacgattacg agctggtgtt taccgcgccg gaaagttgcc gcagccgcgt gcttgatgcg
     1321 gcagaacggt gcggcgtgcc ggtaacgcgc atcggcaaaa tcaacggagg atgccgtctg
     1381 aaggttttag atgccgacgg cagggaattg gaactacatt ctttaggatt cgatcatttt
     1441 ggctgatttt aaacctgact ttgcgtggct gttgaaacga ccgttgtgtt ttttggcttt
     1501 tggtttcggc agcgggctgg ctccgttcgc gccgggtaca tttggcactt tggcggcact
     1561 gcctttggca tttgtgctga ttttgctcgg catagacggg ctgctgctgg cttttttgtg
     1621 tatcgtgctg tttatgtggg gcatacgcat ttgcgcttat gcggaacgtg aaacgggtgt
     1681 cagcgaccat ggtgggattg tttgggacga gattgtcgcc atgctgtttg tgctggcgtt
     1741 tgtgccgttc aggtggacgt ggtggctggc ggcatttgtc ctattccgtc tgtttgacgc
     1801 gctcaaaccg tctcccgtcg gttggtttga caagaatctg cacggcggtt tgggcattat
     1861 ggcggacgat atggcggctg cggtgatgac tttgattgtc ttgaggattg caatgctgtt
     1921 ttaaacggtg ctgccttgta aaaatgccgt ctgaaagcct ttcagacggc attgtttcgg
     1981 aggttaacgc gttaccggtt tgtatttgat gcgtttcggt ttcgtgcctt cttcgccgag
     2041 tcggcgtttc ttgtcggctt cgtattcctg atagttgccg tcaaagaaca cccatttgga
     2101 gtcgccttcg caagccaaga tatgcgtagc aatacggtcg aggaaccagc ggtcgtgcga
     2161 aatcaccatc acgctgccgg caaattccag caatgcgtct tccaacgcgc gcagggttcc
     2221 cacgtcgagg tcgttggacg gttcgtccag cagcaacaca ttgccaccgc ccaacaaggt
     2281 ttttgccaag tgcaaacgtc cgcgttcgcc gccggaaagc tgccccgtga ttttgctttg
     2341 gtcgctgcct ttgaaattga agcgtcccaa atattggcgg gcggggattt caaactgccc
     2401 gacctgtaaa atatcgcgac cttcggcaat gttgtcgaac acggttttgt cgttttgcaa
     2461 accttcgcgg ctttggtcaa tcaagctcat tttcacggtt tgcccgattt tcacttcacc
     2521 agaatcgggc tgctctttgc ccgcaatcat tttaaacagt gtcgatttac ccgcgccgtt
     2581 cggaccgatg atgccgacaa tcgcgcccgc aggcactttg aagctcaaat cgtcaatcag
     2641 cactttgtcg ccgaacgatt tggaaacatt cacaaattca atcacttcgt tacccaaacg
     2701 ctcggcgacg ggaatgaaga tttcctgcgt ttcattgcgt ttttggtatt cgtagttgct
     2761 catttcttca aaacgagcca aacgcgcttt ggacttggct tggcggcctt tggcattttg
     2821 gcgcacccat tccaattcct gcttcatcgc cttcacgcgc gcggcttcgg attttgcctc
     2881 gttttccaag cgtttttctt tctgctccag ccaagacgag taattgcctt tccacggaat
     2941 accatggccg cggtcgagtt ccaaaatcca ttcggcggcg ttgtcgagga agtagcggtc
     3001 gtgtgttacc gcaacgactg taccggggaa gcgcacgaga aattgctcca gccactcgac
     3061 agattccgcg tccaagtggt tggtcggctc gtccagcaaa agcatatcgg gtttgctcaa
     3121 caagagtttg cacaaggcaa cgcggcgttt ttcaccgccg gacaaattgc cgattttggc
     3181 atcccaatca ggcaggcgca gcgcgtcggc ggcgatttcc agttcgtgtt ccgcaccgcc
     3241 gcccgtggac gaacctgccg cgataatcgc ttccaagcga ccttgttctt ccgccaatgc
     3301 gtcaaaatcc gcatcaggat tggcatactc ggcatacact tcttccaaac gtttttgtgc
     3361 ggcagccact tcgcccaaac cgctttccac ttcctcgcgc acggttttct caggatcaag
     3421 ctcaggctct tgcggcaaat agccgatttt aatgccgccc atcggcacgg cttcgccctc
     3481 aaattcttta tccacgcccg ccataatccg cagtacagta gatttacccg cgccgttcaa
     3541 accgagcagg ccgattttcg cgccggggaa gaaagaaagg gaaatatctt taatgatggt
     3601 tttctgcggc ggcacaacct tgctcacgcg cagcatagaa tagacgtatt gttgggacat
     3661 ggttttctcg ttttcatcaa acaaatttca gacggccatt ttaaccgata atttgattta
     3721 agccagttta tccgcgaacc ggtattgcca aaatcgggca ggattcataa aatccgctta
     3781 tccctttgaa attatataga caaaaaaata ataatgatag gggatcgccg ccccggcaac
     3841 catttcggat tttccaaagc
//
LOCUS       DBBZXU010000138         3634 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.138, whole genome shotgun sequence.
ACCESSION   DBBZXU010000138 DBBZXU010000000
VERSION     DBBZXU010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3634
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.138"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            152..510
                     /locus_tag="ACJJDE_001936"
                     /pseudo
     CDS             152..510
                     /locus_tag="ACJJDE_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245152.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            541..3393
                     /gene="gcvP"
                     /locus_tag="ACJJDE_001937"
     CDS             541..3393
                     /gene="gcvP"
                     /locus_tag="ACJJDE_001937"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014573860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004375 - glycine dehydrogenase
                     (decarboxylating) activity [Evidence IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HGG7541804.1"
                     /translation="MKLSELFNPDEFAARHLSFGDEAALLAAVGEKSMDDFVGNTVPQ
                     SIRMPSELDLPDALTEADALAKLKGIASKNVINKSYIGLGYYPTRVPNVTLRNVLENP
                     GWYTAYTPYQAEIAQGRLEALLNFQQVCIDLTGFPVAGASLLDEATAAAEAMAMAHRV
                     GKVKSERFFVDARVYPQTLDVMKTRAKYFGFELVVGDFAQAEEGEYFGALFQYVGKDG
                     DVQDLQDVIGRLKAKGTIVAVAADIMSLVLLKSPAELGADIALGNTQRFGVPMGFGGP
                     HAAYFAFKDEFKRSAPGRIIGVSKDASGKPALRMALSTREQHIRREKATSNICTAQAL
                     LANLAGMYAVYHGPEGVKRIANRIHALASAFADALVSDGLNVVHKVFFDTVTVDFGNK
                     EKADQVFAAALESGYNLRRVNDTQVAAAFHETSACEDLVDLYRAFTGKDAFAFADDVK
                     GRLNAELLRQDDILQHPVFNRYHTEHEMLRYLKKLEDRDLAMNRSMISLGSCTMKLNA
                     TAEMLPITWAEFSDIHPYAPEAQTVGYRELLADMENSLKAITGFDAISFQPNSGAQGE
                     YSGMLAIRRYQEAQGEAQRNICLIPKSAHGTNPATAAMLGLKVVVVDTDEHGNVNIDD
                     LKAKAEQHRDALSAIMITYPSTHGVYEEGIRDICRIIHENGGQVYMDGANLNAQIGIM
                     QPAEVGADVLHMNLHKTFCIPHGGGGPGMGPIGLKAHLAPFAPGHVVTDMHNASADQT
                     AVAAAAFGSASILPITWMYLTMMGKQGMEQATRWALLNANYVAKRLSEDYPILYTGKN
                     GRVAHECIVDLRPLKAESGITETDIAKRLMDYGFHAPTVSFPVAGTLMIEPTESESKA
                     ELDRFIAALKQIKQEVLKVERGEWPKEDNPLVNAPHTASDVTGEWTHPYSREEAVFPL
                     PFVREHKFWPSVNRVDDVYGDRNLVCSCPPMENYED"
BASE COUNT          858 a         1044 c          937 g          795 t
ORIGIN      
        1 atttaatcca ctataatcat gaaccgactg gaacaccaaa ctgcttcggg acgcatatgc
       61 cgtctgaagt gcaaaaccta cgccatacag ccgcatgaag ttgcagcggt atggcgtttt
      121 ttgaaaaaga cggcctgccg gttcagacgg catgaccgac cgtccgagcc tgctgtggat
      181 aaagcccgga caggctgaaa tcatggaata ttgcgaacct gaagaagcat ccgacccgta
      241 cgcaacatac aggcgtgcca acctgatggc gaggctgccg ctgtttgtcg tgattttggt
      301 tctgctcaat attgttttcc gcttccggcg catcccttag cttggctggt gcctgcaggt
      361 ttcatggttt tggtcggcgg ctttccctta tcgctgccgc ttgtggcgct gcttgtcctg
      421 acctgctgca ttctggcgca ttgtccgcca ttatcccgtc ttttgtgcta cccttgcccg
      481 aatcatccga tgtctaaaaa ttctgcctga tggcagccct acaaacccga aggagtagaa
      541 atgaaactgt ccgaactgtt caaccccgac gaatttgccg cgcggcattt gagtttcggc
      601 gacgaagcgg cgttgcttgc cgctgtcggc gagaaaagta tggacgattt tgtcggcaac
      661 accgtgccgc aaagcatccg tatgccgtcc gaactcgatt tgcccgatgc cctgaccgaa
      721 gcggacgcgt tggcaaaatt gaaaggcatt gcgtcgaaaa acgtgatcaa caagtcctat
      781 atcggtttag gctattaccc gacccgcgtg ccgaatgtga ctttgcgcaa cgtattggaa
      841 aatccgggct ggtataccgc ctacacgccg tatcaggcgg aaatcgcgca gggtcgtttg
      901 gaagcattgt tgaacttcca acaagtgtgc atcgatttga ccggttttcc cgtggcgggc
      961 gcgtctttgc tggacgaggc aactgccgcg gctgaagcga tggcgatggc gcaccgagtg
     1021 ggcaaagtga aatccgaacg tttctttgtg gatgcgcgcg tgtatccgca aactttggac
     1081 gtgatgaaaa cccgcgccaa atatttcggc tttgaattgg tggtcggtga ttttgcccaa
     1141 gcggaggaag gcgaatactt cggtgcgctg ttccaatacg tcggcaaaga cggcgatgtg
     1201 caagacttgc aggacgttat cggccgtctg aaagccaaag gcacaatcgt tgccgttgca
     1261 gccgacatta tgagcttggt tttgctgaag tctccggctg aactaggtgc ggatattgct
     1321 ttgggcaaca cgcaacgctt cggcgtgcct atgggctttg gtggtccgca cgccgcttat
     1381 ttcgcgttta aagacgagtt caaacgttcc gccccgggcc gcatcatcgg cgtatccaaa
     1441 gacgcatcag gcaaacctgc cttgcgcatg gcgttgtcca cccgcgagca acacatccgc
     1501 cgcgaaaaag cgacatccaa tatttgtacc gcgcaggcat tgctggcgaa cttggcgggt
     1561 atgtacgccg tttaccacgg ccctgaaggt gtgaaacgca tcgccaaccg cattcacgcg
     1621 ctggcttctg cctttgccga tgcgctggtt tcagacggcc tgaatgtggt tcataaggtc
     1681 ttcttcgata ccgttaccgt cgatttcggc aacaaagaga aagcagacca agtgtttgcc
     1741 gctgctttgg aatcgggcta taacctgcgc cgcgttaacg atactcaagt tgcggctgca
     1801 ttccacgaaa catcggcatg cgaagatttg gttgatttgt accgcgcgtt taccggcaag
     1861 gatgcgttcg catttgccga tgatgtcaaa ggccgtctga acgccgaatt gctgcgtcaa
     1921 gatgacattc tgcaacatcc tgtgttcaac cgttaccaca ccgaacacga aatgttgcgc
     1981 tatctgaaaa aactcgaaga ccgcgatttg gcgatgaacc gcagcatgat ttcgctcggt
     2041 agctgcacca tgaaactcaa cgcgactgcg gaaatgctgc cgattacttg ggcggagttc
     2101 tccgacatcc acccttacgc tcccgaagcg caaaccgtcg gctaccgcga attgcttgcc
     2161 gatatggaaa acagcctgaa agccatcacc ggctttgacg caatttcctt ccagcccaac
     2221 tccggcgcgc agggcgaata cagcggtatg cttgccatcc gccgctatca ggaagcgcaa
     2281 ggcgaagcgc agcgcaacat ctgcctgatt cccaaatccg cccacggcac caaccccgcc
     2341 accgccgcca tgctcggttt gaaagtcgtc gtcgtcgata ccgacgaaca cggcaacgtc
     2401 aacatcgacg atttgaaagc caaagccgag caacaccgcg acgctttgtc cgccatcatg
     2461 attacctatc cgtccaccca cggcgtgtac gaagaaggca tccgcgacat ctgccgcatc
     2521 atccatgaaa acggcggaca ggtttatatg gacggcgcca acctcaacgc tcaaatcggc
     2581 atcatgcagc ctgccgaagt cggcgcggac gtgttgcaca tgaacctgca caaaaccttc
     2641 tgtatccctc acggcggcgg cggcccgggc atgggtccga ttggcttgaa agcccatctg
     2701 gctccgttcg caccaggcca tgtggtaacc gatatgcaca acgccagtgc cgatcaaact
     2761 gccgtggctg ccgcagcttt cggttctgcg tccatcctgc cgattacttg gatgtacctg
     2821 accatgatgg gcaaacaagg catggagcag gcaacacgct gggcattgct caacgccaac
     2881 tacgttgcca aacgcttgag cgaagactat ccgattctgt atacaggcaa aaacggccgc
     2941 gtcgcgcacg aatgtatcgt cgacttgcgt ccgctcaaag ccgaaagcgg cattaccgaa
     3001 accgacatcg ccaaacgcct gatggactac ggcttccacg ccccgaccgt ctccttcccc
     3061 gttgccggca cgctgatgat cgagccgacc gaaagcgaga gcaaagccga actcgaccgc
     3121 ttcatcgccg ccctgaaaca aatcaaacag gaagtgttga aagtcgagcg cggcgaatgg
     3181 ccgaaagagg acaacccgtt ggtgaacgct ccgcataccg catccgacgt aactggcgaa
     3241 tggacgcatc cgtattcccg cgaagaagcc gtcttcccat tgccgttcgt ccgcgaacac
     3301 aaattctggc cgagcgtcaa ccgtgtggac gacgtgtacg gcgaccgcaa tctcgtgtgc
     3361 agctgcccac cgatggaaaa ttatgaagac tgaccgttga aaccccgaag acaaatgccg
     3421 tctgaaacac tttcagacgg cattttcgtc gacggcagac tggttgcacc aatacacgta
     3481 tctcgactat aactttaaaa caaatgagtt aaaccagtat ccatacatca gcttttttat
     3541 catcctactt tttattcatc cgatcgtgca aacagatttc aaagatgaaa agcctattca
     3601 caccctttga tgtcatttcc acacggacaa acaa
//
LOCUS       DBBZXU010000139         3608 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.139, whole genome shotgun sequence.
ACCESSION   DBBZXU010000139 DBBZXU010000000
VERSION     DBBZXU010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3608)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3608)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3608
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.139"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..857)
                     /locus_tag="ACJJDE_001938"
     CDS             complement(<1..857)
                     /locus_tag="ACJJDE_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7541805.1"
                     /translation="MYSNNAITNNRNNITLGAYRDAIISIFSDENVVRAIGTINSMYE
                     EYLTLSHKIDQRAFLREGERLSAKAREFQRTAEEAQKSLKEGIGRAASKFRGNSKEAF
                     VARKVQSDLQKALNASNYNKQQYARRAATALENASKSKVMAANLGKFTYGATVAMGTL
                     SMGSAWWKALDEEGNWSDVGLSSASFLGGLMGFQWGAALGVGAFGLLTGGAGWLVVGT
                     IIGGGSGAWWGSLGAEKAWRWFEDFLNLNRSDKFHVTDPLALDLDGDSIETVATKGLA
                     GALFDHRSQG"
     gene            2035..>3608
                     /locus_tag="ACJJDE_001939"
     CDS             2035..>3608
                     /locus_tag="ACJJDE_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HGG7541806.1"
                     /translation="MCSAVLFIYFFLLNIFLFQPAVIHIQSNYILFMSIVSAPLPALS
                     ALIILAHYHGIAANPADIQHEFCTSAQSDLNETQWLLAAKSLGLKAKVVRQPVKRLAM
                     ATLPALVWCDDGNHFILAKTDGGGEHAQYLIQDLTTNKSAVLSFAEFSNRYSGKLILV
                     ASRASVLGSLAKFDFTWFIPAVIKYRRLFFEVLVVSVVLQLFALITPLFFQVVMDKVL
                     VHRGFSTLDVVSVALLVVSLFEIVLGGLRTYLFAHTTSRIDVELGARLFRHLLSLPLS
                     YFEHRRVGDTVARVRELEQIRNFLTGQALTSVLDLAFSFIFLAVMWYYSSTLTWVVLA
                     SLPAYAFWSAFISPILRTRLNDKFARNADNQSFLVESITAVGTVKAMAVEPQMTQRWD
                     NQLAAYVASGFRVTKLAVVGQQGVQLIQKLVTVATLWIGARLVIEGKLTVGQLIAFNM
                     LSGQVAAPVIRLAQLWQDFQQVGISVARLGDILNAPTENASSHLALPDIRGEITFEHV
                     DFRYKADGRLILQDLNL"
BASE COUNT          962 a          776 c          746 g         1124 t
ORIGIN      
        1 ccttggctgc ggtggtcgaa caatgcacct gcaaggcctt tggtggcaac ggtttctata
       61 ctgtcgccat ctagatctag ggcaaggggg tcggttacgt ggaatttgtc gctgcggtta
      121 agatttaaga aatcttcaaa ccatctccaa gctttttcag ctcctaatga tccccaccaa
      181 gctcctgagc cacctccaat tatagttcca actactagcc aacctgcgcc accagtaagt
      241 aaaccaaaag ccccaacacc caaagccgca ccccattgga agcccattag cccacccaaa
      301 aaagaagctg atgagagacc aacatcactc caatttcctt cttcatccaa ggctttccac
      361 caagcacttc ccatactcaa agttcccatg gcaacagttg ccccataagt aaacttaccc
      421 aaattcgctg ccataacttt tgattttgaa gcattctcta acgctgttgc cgcacgtctt
      481 gcatattgct gcttgttata gttgctagca ttcaatgctt tttgcaaatc actttgtact
      541 tttcttgcaa caaatgcctc ctttgaatta ccacgaaatt tactagcagc tcttccaatt
      601 ccttctttta agcttttttg tgcctcttct gctgtgcgtt ggaattctct tgccttagca
      661 gacagacgct caccctccct taaaaatgct cgttgatcta tcttgtgcga aagggtcaaa
      721 tattcttcgt acattgagtt aatcgtacca atcgccctaa ccacattttc atcagaaaat
      781 atggaaataa tagcatccct atacgcacct agagtaatat tgtttctatt attagttata
      841 gcattattcg aatacataat agcacctcca aacttagaac tgaatacgtt tatattctct
      901 gtgtaataat atcaaataat taattaatgg ataagtaagt ccgaaaaaat aacaactaaa
      961 ataagcaata tactgattct ctcctttatt aattagatat attgaaaaac aaataaaaaa
     1021 taaacagaaa acattcatgt gaaaaagcca cctcatattc ttatttataa gtttaaaata
     1081 actaggcatt gtatatttaa aaatcggtac atccaacgga aacaaaccac ataaaaattt
     1141 ttctttattc tttattaaag acatagtttt atttttcaaa attagtccag ataatatact
     1201 aacaattact attaaaacaa taagcacagc gtaatttttt ataaaattca ttaaaataat
     1261 aacgaaaata ctaaatagat tacatactgt aaattgaaat ataaaatatt cagtatttaa
     1321 tccattttca accgcgagtt ttttaaaata tccttgctcg aaaaaattaa aaaaatccat
     1381 taatactttc ctctcaagaa aactaatttt agtttagtta agataaaatg caatattacc
     1441 ttttctccat aaaagtatgg agcttatata cataaattat gtgcgaggta gcctgaaaaa
     1501 tatccaatac aagatagtag gagatgtttc ccttatcact attggccaat acccaattgg
     1561 caggcactct atttccaaaa ttttctcaag aatagttaaa tattattaat tagtttaaaa
     1621 acaataacat acgtttgtat ttatccgttt tggtctgcct gaaacagact ctatgtccat
     1681 acacggacat gtagacagtt tccttgttat tttggttgct cgtcattagt gatgatactt
     1741 tactcctctc ttaaaaaatc gtcaagaact gttatcaatc tttaaagtct tttttaaaca
     1801 aatatatata cgttcaggct gtctgaaaca caaaaaaatg atgttacccg accgtgacag
     1861 agtcggggca gccggtacct taaccctgca ccttaaccct gtgccttaac ggtatgcagg
     1921 aggcacgaga ggtgcgaggc atcctcatct aactcgattc ctaagccgtt ttaccttcct
     1981 gaaacgagaa cttttccata ctttctcttt acaattccca tatacatcct tacaatgtgt
     2041 tctgctgttt tatttatata tttctttcta ctgaatatat tccttttcca gccagccgtt
     2101 atccacatcc aatctaacta tattttattt atgtctatcg tatccgcacc gctccccgcc
     2161 ctttccgccc tcatcatcct cgcccattac cacggcattg ccgccaatcc tgccgatata
     2221 cagcatgaat tttgtacttc cgcacagagc gatttaaatg aaacgcaatg gcttttagct
     2281 gccaaatctt tgggattgaa ggcaaaggta gtccgccagc ctgtcaaacg tttggctatg
     2341 gcgactttac ccgcattggt atggtgtgat gacggcaacc attttatttt ggctaaaaca
     2401 gacggtgggg gtgagcatgc ccaatatcta atacaggatt taactacgaa taagtctgcg
     2461 gtattgtctt ttgccgaatt ttctaacaga tattcgggca aactgatatt ggttgcttcc
     2521 cgcgcttcgg tattgggcag tttggcaaag tttgacttta cctggtttat tccggcggta
     2581 atcaaatacc gccggttgtt ttttgaagta ttggtggtgt cggtggtgtt gcagctgttt
     2641 gcgctgatta cgcctctgtt tttccaagtg gtgatggaca aggtgctggt acatcgggga
     2701 ttctctactt tggatgtggt gtcggtggct ttgttggtgg tgtcgctgtt tgagattgtg
     2761 ttgggcggtt tgcggacgta tctgtttgca catacgactt cacgtattga tgtggaattg
     2821 ggcgcgcgtt tgttccggca tctgctttcc ctgcctttat cctatttcga gcacagacga
     2881 gtgggtgata cggtggctcg ggtgcgggaa ttggagcaga ttcgcaattt cctgaccggt
     2941 caggcgctga cttcggtgtt ggatttggcg ttttcgttta tctttctggc ggtgatgtgg
     3001 tattacagct ccactctgac ttgggtggta ttggcttcgt tgcctgccta tgcgttttgg
     3061 tcggcattta tcagtccgat actgcggacg cgtctgaacg ataagttcgc gcgcaatgca
     3121 gacaaccagt cgtttttagt agaaagcatc actgcggtgg gtacggtaaa ggcgatggcg
     3181 gtggagccgc agatgacgca gcgttgggac aatcagttgg cggcttatgt ggcttcggga
     3241 tttcgggtaa cgaagttggc ggtggtcggc cagcaggggg tgcagctgat tcagaagctg
     3301 gtgacggtgg cgacgttgtg gattggcgca cggctggtaa ttgagggcaa gctgacggtg
     3361 gggcagctga ttgcgtttaa tatgctctcg ggacaggtgg cggcgcctgt tatccgtttg
     3421 gcgcagttgt ggcaggattt ccagcaggtg gggatttcgg tggcgcgttt gggggatatt
     3481 ctgaatgcgc cgaccgagaa tgcgtcttcg catttggctt tgcccgatat ccggggggag
     3541 attacgttcg aacatgtcga tttccgctat aaggcggacg gcaggctgat tttgcaggat
     3601 ttgaacct
//
LOCUS       DBBZXU010000140         3594 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.140, whole genome shotgun sequence.
ACCESSION   DBBZXU010000140 DBBZXU010000000
VERSION     DBBZXU010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3594)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3594)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3594
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.140"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            174..1016
                     /locus_tag="ACJJDE_001940"
     CDS             174..1016
                     /locus_tag="ACJJDE_001940"
                     /EC_number="2.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006541 - glutamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HGG7541807.1"
                     /translation="MCQLLGMNCNTPTDIMFSFEGFRRRGGITDHHADGFGIGFFEGK
                     GVRLFHDDKPSANSPVADLVRAYQIKSENVVAHIRKASQGQTSLANTHPFMREMWGGY
                     WLFAHNGHLIDFFPEQGEFFHPVGTTDSERAFCHILNRLRTRFAARPDDDTLFDAIAG
                     LTHEIRKFGLFNFMLSDGIALFAHASTLLHYIVRQAPFGKARLLDDDVMVDFAEVTTP
                     SDRVAVIATLPLTRDESWSQLAVDELVMFREGNIVRHDRPENPVYMSVEEGLETARAA
                     GVAV"
     gene            1046..1510
                     /locus_tag="ACJJDE_001941"
     CDS             1046..1510
                     /locus_tag="ACJJDE_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HGG7541808.1"
                     /translation="MKCPFCAHPDTRVADSRLMDERNAVRRRRYCPNCGKRFGTLETA
                     ELKMPAVIGPDKKRSPFNAQRLRNDLTAAARKSALTPEQIDETVRLTEHRLYTSGQRD
                     IPSAALADMVLKELLRQDTEAAVRFAALHKRFDNPADFASWLAQAVKTDRKA"
     gene            1542..2651
                     /gene="ribD"
                     /locus_tag="ACJJDE_001942"
     CDS             1542..2651
                     /gene="ribD"
                     /locus_tag="ACJJDE_001942"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HGG7541809.1"
                     /translation="MFSETDISMMQNALKLAALGRFSTSPNPRVGCVIAQGSQIVGQG
                     FHVKAGEPHAEVHALRQAGEMAQGATAFVTLEPCSHYGRTPPCAEALLRSGVTRVVAA
                     MRDPNPLVAGKGLALLEAAGIKTECGLLEHQARELNRGFLSRIERRRPFVRLKCAVSL
                     DGKTALSDGSSFWITGEDARADVQVLRAESCAVLTGIGTVLADNPRLNVRAFPTLRQP
                     ARIVLDSRLRLPLDSHLLTDGQSPTYIATLERDEDKLRPYREHAHIRILMPSETADGK
                     IDLHRLMRLLADEGYGEVMVEAGAKLTSAFLAEDLADEIVLYRSPKILGSGKDLFSLP
                     ENRAALSAPPLWTPVSTEILGHDVKTVFRKNGNAF"
     gene            2754..>3594
                     /locus_tag="ACJJDE_001943"
     CDS             2754..>3594
                     /locus_tag="ACJJDE_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG7541810.1"
                     /translation="MDTKEILGYAAGSIGSAVLAVIILPLLSWYFPADDIGRIVLMQT
                     AAGLTVSVLCLGLDQAYVREYYAAADKDILFKTLFLPPLLSAAAIAALLLSRPSLPSE
                     ILFSLDDAAAGIGLVLFELSFLPIRFLLLVLRMEGRALAFSSAQLVPKLAILLLLLTV
                     GLLHFPANTAVLTAVYALANLAAAAFLLFQNRCRLKAVRRAPFSSAVLHRGLRYGIPI
                     ALSSIAYWGLASADRLFLKKYAGLEQLGVYSMGISFGGAALLFQSIFSTVWTPYIFRA
                     IEAN"
BASE COUNT          739 a         1206 c          913 g          736 t
ORIGIN      
        1 tgaggcattg aaattccaga ttcccgcctg cgcgggaatg acagaacctt aagtttccgt
       61 ctttgttttc tgttttcgcg ggaataatgg ggaacaaacc gtatttcaga cggcattttc
      121 agttcggggt ataatccgaa tacttgcgac catctgaatc attgggacaa actatgtgtc
      181 aactgctggg catgaactgc aatacgccga ccgatattat gttttccttt gaaggcttcc
      241 gccggcgcgg cggcattacc gaccatcatg ccgacggttt cggcatcggc tttttcgaag
      301 gcaaaggcgt gcgcctgttc catgacgaca aacccagtgc caattcgccc gtcgccgacc
      361 tcgtgcgcgc ctaccagatt aaatcggaaa acgtcgtcgc ccatatccgc aaagcatcgc
      421 aaggacaaac ctcgctggcg aacacccatc cctttatgcg cgaaatgtgg ggtggctact
      481 ggctgtttgc ccacaacggg catttgattg attttttccc cgaacagggc gaatttttcc
      541 accccgtcgg cacaaccgat tccgaacgcg cgttctgcca catcctcaac cgcctgcgca
      601 cccgctttgc cgcccgtccc gacgacgaca cgctgtttga cgcgattgcg gggctgacgc
      661 acgaaatccg caagttcggg ctgtttaact ttatgctttc agacggcatt gccctgtttg
      721 cccacgccag cacactgctg cactacatcg tccgccaagc cccgttcggc aaggcgcgcc
      781 tgctcgacga cgacgtgatg gtcgattttg ccgaagtaac cacgccctcc gaccgcgtcg
      841 ccgttatcgc caccctgccg ctgacccgcg acgaatcatg gtcccaactt gccgtggacg
      901 aactggtcat gttccgcgaa ggcaacatcg tccgacacga ccgtcccgaa aaccccgttt
      961 atatgagtgt cgaagaaggt ttggaaaccg cgcgcgccgc cggcgtcgcc gtctgaactt
     1021 cagacgacat aggaggacga acccgatgaa atgcccgttt tgcgcccacc ccgacacccg
     1081 cgttgccgat tcgcgcctga tggacgaacg caacgccgtc cgccgccgcc gatactgccc
     1141 caactgcggc aaacgcttcg gcacgctcga aaccgccgaa ctcaaaatgc ccgccgtcat
     1201 cggtccggac aaaaaacgtt cgccctttaa tgcacaacgc ctccgcaacg acctgaccgc
     1261 cgccgcccga aaatccgccc tgacacccga acagatcgac gaaaccgtcc gcctgacgga
     1321 acacaggctc tacacttcgg gtcagcgcga catcccctct gccgcacttg ccgacatggt
     1381 gctaaaagaa ctgctccgac aagatacgga agccgccgtc cgtttcgccg ccctgcacaa
     1441 acgcttcgac aatccggcag actttgcctc gtggctggcg caagccgtca aaacagaccg
     1501 caaagcctga ttcccccaac ccatactgat acggtatccc catgttttcc gaaacagata
     1561 tttctatgat gcaaaacgcc ctcaaacttg ccgctttggg gcgtttttcc acttcgccca
     1621 atccgcgcgt cggctgcgtt atcgcacaag gcagccaaat tgtcggacag ggcttccacg
     1681 tcaaagcggg cgaaccgcac gccgaagtcc acgccctgcg tcaggcgggc gaaatggcac
     1741 aaggcgcgac cgcctttgtt accctcgaac cgtgcagcca ttacggacgc acaccgccct
     1801 gcgccgaagc tctgctccgt tccggcgtaa cacgcgtcgt tgccgccatg cgcgacccca
     1861 acccgctggt tgcaggcaaa gggcttgccc tgctcgaagc agcaggcatc aagacggaat
     1921 gcggtttact cgaacatcag gcaagggaac tcaaccgagg cttcctgtcg cgcatcgaac
     1981 gccgccgccc cttcgtccgc ctcaaatgcg ccgtttcgct ggacggcaaa accgcccttt
     2041 cagacggcag cagcttttgg attaccggcg aagacgcgcg tgccgacgta caggttttgc
     2101 gtgccgaaag ctgcgcggtg ctgaccggca tcggcacggt gttggcggac aatccccggc
     2161 tcaacgtccg cgcttttcca actttgcgcc aacccgcacg catcgtgtta gacagccgcc
     2221 tgcgcctgcc cttggacagc caccttctga ccgacggaca atctccaacc tacatcgcca
     2281 ccttggaacg cgatgaagac aaactccgcc cctatcggga acacgcacat atccgcatcc
     2341 tgatgccgtc tgaaacggca gacggcaaaa tcgacctgca ccgcctgatg cgcctccttg
     2401 ccgacgaagg atacggcgaa gtaatggtgg aagccggcgc gaaactcaca tccgcctttt
     2461 tggcggaaga tttggcggac gaaatcgtgc tgtaccgttc gcccaaaatc ctcggcagcg
     2521 gcaaagacct gttttccctg cccgaaaacc gcgccgccct ttccgcaccg cccttatgga
     2581 cacccgtttc caccgaaatc ctcggacacg acgtcaaaac cgtattccgg aaaaacggca
     2641 acgcctttta aagggtttgc cgccgtttca ctatataata acgccgtcaa attccgatca
     2701 aaaaaggctt cagacggcac cggcggcatc ccgcctccgc ccggacatca aaaatggaca
     2761 caaaagaaat cctcggctac gcggcaggct cgatcggcag cgcggtttta gccgtcatca
     2821 tcctgccgct gctgtcgtgg tatttccctg ccgacgacat cgggcgcatc gtgctgatgc
     2881 agacggcggc gggactgact gtgtcggtat tgtgcctcgg gctggatcag gcatacgtcc
     2941 gcgaatacta tgccgccgcc gacaaagaca ttttgttcaa aaccctgttc ctgccgccgc
     3001 tgctgtctgc cgccgcgata gccgccctgc tgctttcccg cccgtccctg ccgtctgaaa
     3061 tcctgttttc gctcgacgat gccgccgccg gcatcgggct ggtgctgttt gaactgagct
     3121 tcctgcccat ccgctttctc ttactggttt tgcgtatgga aggacgcgcc cttgcctttt
     3181 cgtccgcgca actcgtgccc aagctcgcca tcctgctgct gctgctgacg gtcgggctgc
     3241 tgcactttcc ggcgaacacc gccgtcctga ccgccgttta cgcgctggca aaccttgccg
     3301 ccgccgcctt tttgctgttt caaaaccgat gccgtctgaa ggccgtccgg cgcgcaccgt
     3361 tttcatccgc cgtcctgcat cgcggcctgc gctacggcat accgatcgca ctaagcagca
     3421 tcgcctattg ggggctggca tccgccgacc gtttgttcct gaaaaaatat gccggcctag
     3481 aacagctcgg cgtttattcg atgggtattt cgttcggcgg agcggcatta ttgttccaaa
     3541 gcatcttttc aacggtctgg acaccgtata ttttccgcgc aatcgaagca aacg
//
LOCUS       DBBZXU010000141         3568 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.141, whole genome shotgun sequence.
ACCESSION   DBBZXU010000141 DBBZXU010000000
VERSION     DBBZXU010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3568)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3568)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3568
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.141"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            186..1061
                     /gene="dapA"
                     /locus_tag="ACJJDE_001944"
     CDS             186..1061
                     /gene="dapA"
                     /locus_tag="ACJJDE_001944"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010360271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HGG7541811.1"
                     /translation="MLQGSLVALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGT
                     TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLS
                     VVPYYNKPSQEGIYRHFKAVAEAAAIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGV
                     KEASGNIGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMC
                     RAALQGDIALARELNDRLIPIYDTMFCEPSPAAPKWAVSALGRCEPHVRLPLVPLTEG
                     GQAKVRAALKASGQL"
     gene            1070..2266
                     /gene="bamC"
                     /locus_tag="ACJJDE_001945"
     CDS             1070..2266
                     /gene="bamC"
                     /locus_tag="ACJJDE_001945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HGG7541812.1"
                     /translation="MPSEPFGRHNATNTLISITQDDTMTHIKPVIAALALIGLAACSG
                     SKTEQPKLDYQSRSHRLIKLEVPPDLNNPDQGNLYRLPAGSGAVRASDLEKRRTPAVQ
                     QPADAEVLKSVKGVRLERDGSQRWLVVDGKSHAEIWPLLKAFWQENGFDIKSEEPAIG
                     QMETEWAENRAKIPQDSLRRLFDTVGLGGIYSTGERDKFIVRIEQGKNGVSDIFFAHK
                     AMKEVYGGKDKDTTVWQPSPSDPNLEAAFLTRFMQYLGVDGQQAENASAKNPTLPAAN
                     EMARIEGKSLIVFGDYGRNWRRTALALDRIGLTVVGQNTERHAFLVQKAPNESNAVTE
                     QKPGLFKRLLGKGKAEKPAEQPELIVYAEPVANGSRIVLLNKDGSAYAGKDASALLGK
                     LHSELR"
     gene            complement(2323..3255)
                     /gene="pip"
                     /locus_tag="ACJJDE_001946"
     CDS             complement(2323..3255)
                     /gene="pip"
                     /locus_tag="ACJJDE_001946"
                     /EC_number="3.4.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0030163 - protein catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl aminopeptidase"
                     /protein_id="HGG7541813.1"
                     /translation="MYEIKQPFHSGYLQVSEIHQIYWEESGNPDGVPVIFLHGGPGAG
                     ASPECRGFFNPDVFRIVIIDQRGCGRSRPYACAEDNTTWDLVADIEKVREMLGIRKWL
                     VFGGSWGSTLSLAYAQTHPERVKGLVLRGIFLCRPSETAWLNEAGGVSRIYPEQWQKF
                     VAPIAENRRNRLIEAYHGLLFHQDEEVCLSAAKAWADWESYLIRFEPEEVDEDAYASL
                     AIARLENHYFVNGGWLQGDRAILNNIGKIRHIPTIIVQGRYDLCTPMQSAWALSKAFP
                     EAELRVVQAGHCAFDPPLADALVQAVEDIFPRLL"
BASE COUNT          947 a         1174 c          802 g          645 t
ORIGIN      
        1 cgacggcacc ggcataaacc ggcgaatata ataaaatgat ttcaaacagg aaaaatcaat
       61 ttccaccata cctttcggcg caaacgcccc acatctgcaa cccgccggat ttcacacctg
      121 cggtaaagta ggctacaatc ggaagcatta ccgcccccta caccacaact gataaaaggt
      181 tctgtatgtt acaaggtagc ctggttgccc tgattacccc gatgaatcaa gacggcagca
      241 tccattacga acaactccgc gacttaatcg actggcacat tgaaaacggc acggacggca
      301 tcgtcgccgt cggcacgaca ggcgaatccg ccaccctctc cgtcgaagaa cacaccgccg
      361 ttatcgaagc cgtcgtcaaa cacgttgcca aacgcgtccc cgtcatcgcc ggcacagggg
      421 cgaacaacac cgtcgaagcc atcgcccttt cccaagccgc cgaaaaagcc ggcgcggact
      481 acaccttatc cgtcgtcccc tattacaata agccctccca agaaggcatt taccgccatt
      541 tcaaagccgt tgccgaagcc gccgcgattc cgatgattat ctacaacgtg cccggccgta
      601 ccgtcgtcag catgactaac gacactatcc tgcgccttgc cgaaatcccc aacatcgtcg
      661 gcgtgaaaga agccagcggc aacatcggca gcaacatcga actcatcaac cgcgcgcccg
      721 aaggcttcgt cgtcctgtcc ggcgacgacc acaccgccct accgttcatg ctctgcggcg
      781 gacacggcgt tattaccgta gccgccaacg ccgcgcccaa gctctttgcc gatatgtgcc
      841 gcgccgcgct tcaaggcgat atcgcccttg cacgcgaact caacgaccgg ctgattccga
      901 tttacgacac catgttctgc gaacccagcc ccgccgcacc gaaatgggcg gtatccgccc
      961 tgggcagatg cgaaccgcac gtccgcctgc cgctcgttcc gctgacggaa ggcggacagg
     1021 caaaagtccg cgccgccctg aaagcctcag gacaactcta aatataacta tgccgtctga
     1081 accgttcgga cggcataacg caacaaacac tttaatatcc atcacacagg atgacacgat
     1141 gacccatatc aaacccgtca ttgccgcgct cgcactcatc gggcttgccg cctgctccgg
     1201 cagcaaaacc gaacagccca agctcgacta ccaaagccgg tcgcaccgcc tgatcaaact
     1261 cgaagtccca cccgatttga acaaccccga ccaaggcaac ctctaccgcc tgcctgccgg
     1321 ttcgggcgcc gtccgcgcca gcgatttgga aaaacgccgc acacccgccg tccaacagcc
     1381 tgccgatgcc gaagtattga aaagcgtcaa aggtgtccgc ctcgagcgcg acggcagcca
     1441 acgctggctc gttgtcgacg gcaagtctca tgccgaaatc tggccgctcc tgaaagcctt
     1501 ttggcaggaa aacggcttcg acatcaaatc cgaagaaccc gccatcggac aaatggaaac
     1561 cgagtgggcg gaaaaccgtg ccaaaatccc ccaagacagc ttgcgccgcc tattcgacac
     1621 agtcggtttg ggcggcatct actccaccgg cgagcgcgac aaattcatcg tccgtatcga
     1681 acagggcaaa aacggcgttt ccgacatctt cttcgcccac aaagccatga aagaagtgta
     1741 cggcggcaaa gacaaagaca cgaccgtatg gcagccctcc ccgtccgatc ccaacctcga
     1801 agccgctttc ctgacgcgct ttatgcaata tttgggcgtt gacggacagc aggcggaaaa
     1861 cgcatcggca aaaaacccga ccctgcccgc cgccaacgaa atggcgcgta tcgaaggcaa
     1921 aagcctgatt gtctttggcg actacggcag aaactggcgg cgcaccgcgc tcgccctcga
     1981 ccgcatcggg ctgaccgtcg tcggtcaaaa caccgaacgc cacgctttcc tggttcaaaa
     2041 agccccgaac gaaagcaatg cagttaccga acaaaaaccc ggcctgttca aacgcctgct
     2101 gggcaaaggc aaagcggaga aacctgccga acagccggaa ctgattgtct atgccgagcc
     2161 tgtcgccaac ggctcgcgca tcgtcctgct caacaaagac ggcagcgcat atgccggcaa
     2221 agacgcatcc gcactgttgg gcaaactcca ttccgaactg cgttaaaccg ttcaaaacaa
     2281 aagcagcttc caaacagaag ctgctttttt atgcggaact ttttacaaca accgaggaaa
     2341 aatatcctca accgcctgaa ccaacgcatc cgccaaaggc ggatcgaacg cacaatgccc
     2401 tgcctgaacc accctcaatt ccgcttcggg aaaggctttc gacagcgccc acgcactctg
     2461 catcggcgta cacaaatcat accgcccctg tacgataata gtcgggatat gccgtatttt
     2521 gccgatattg ttcaaaatcg ccctatcgcc ctgcaaccaa ccgccgttga caaaataatg
     2581 gttttccaaa cgcgcgattg ccagcgaggc ataagcatct tcatccactt cctccggctc
     2641 gaaacggatc agatagcttt cccaatccgc ccaagccttt gcggcagaca ggcacacttc
     2701 ttcatcttga tgaaacagca acccgtgata cgcctcaatc agccggttcc gtcgattttc
     2761 agcaatcggc gcgacaaatt tttgccattg ttccggataa atccggctca caccgcccgc
     2821 ctcgttcagc cacgccgttt cagacggcct gcacaaaaat atcccgcgca ataccaatcc
     2881 ctttacccgt tcaggatggg tttgggcata agccagcgac aaagtgctgc cccacgaacc
     2941 gccgaacacc agccatttcc tgatacccag catttcacgg actttttcaa tatccgccac
     3001 caaatcccaa gtcgtattgt cttccgcaca agcatacggg cgcgaacgtc cgcaaccgcg
     3061 ctggtcgatg atgacgatgc ggaacacatc gggattgaaa aaaccccgac attcaggcga
     3121 agcccccgcg cccggcccgc catgtaaaaa aataaccggc acaccgtcgg gattgcccga
     3181 ttcctcccaa taaatttgat gaatttcaga cacctgcaag tatccgctat gaaaaggctg
     3241 ttttatctca tacatcatct tctcccatat tgcttctgac aatccgaaca ttcccacacg
     3301 caacatcacg cacgagacac aagccgcccc gaaaggcaaa tgccgaaaaa tcgcgatata
     3361 gtgaattaac aaaaatcagg acaaggcggc gagccgcaga cagtacggat agtacggaac
     3421 cgattcactc gtgcttaagc accttagaga atcattctct ttgagctaag gcgaggcaac
     3481 gccgtaccgg tttttgttaa tccactataa cagcaaccct gtcgccgtca ttcccgcaaa
     3541 agcgggaatc tagaaatgaa aagcaaca
//
LOCUS       DBBZXU010000142         3567 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.142, whole genome shotgun sequence.
ACCESSION   DBBZXU010000142 DBBZXU010000000
VERSION     DBBZXU010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3567)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3567)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3567
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.142"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            315..1787
                     /gene="pyk"
                     /locus_tag="ACJJDE_001947"
     CDS             315..1787
                     /gene="pyk"
                     /locus_tag="ACJJDE_001947"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0030955 - potassium ion binding [Evidence
                     IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HGG7541814.1"
                     /translation="MNQTSRDLTRISHNTKIVATLGPGSNNVELLEDMIRVGGLNVVR
                     FNFSHGTPEFHQENARIVREAAKRAGQEIAIIADLQGPKIRVGKIAGGGIELNKGETL
                     VLDAALEGEGTREAVGLDYRDLPDDVTAGDVLWLDDGLLTLTVESVEGSRIITRVENS
                     HVLKSNKGINKRGGGLSAGALTEKDFRDLKTAIAIGCDYLAISFVKSAEDLHIARAKV
                     EEEMKGSTAVRPGLVSKIERVEAIENLDEIILAGDGIMVARGDLAVEVGHAAVPALQK
                     RMIRRARELRRFSITATQMMESMITNPVPTRAEVSDVANAVLDGTDAVMCSAETAVGA
                     YPFETVSQMAIICAAAEKEQDSLNGVAEQAEYPEAVSTNLAVAGGAVSVARAVHAKAI
                     VALTESGSTAFEISRHNITLPIFALTPSVSAQRRMAMYRGVRPLILATSTDHDTALNE
                     VETMLVEHNILHSGDQYIITSGSQMRESGSTNTLEVLRVK"
     gene            1912..2046
                     /locus_tag="ACJJDE_001948"
     CDS             1912..2046
                     /locus_tag="ACJJDE_001948"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541815.1"
                     /translation="MSTYTKAKQGISDCLFYSGLNLNQYSVASPCRTICTVCGFVALS
                     "
     gene            2100..3494
                     /locus_tag="ACJJDE_001949"
     CDS             2100..3494
                     /locus_tag="ACJJDE_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpP1/FadL family transporter"
                     /protein_id="HGG7541816.1"
                     /translation="MTPSALKKTVLLLGTAFAAASAQASGYHFGTQSVNAQSTANAAA
                     AEAADASTIFYNPAGLTKLDSSQISVNANIVFPSIRYEADSATDFTGIPVQGSKSGKI
                     TKTTVAPHIYGAYKVNDNLTVGLGVYVPFGSATEYEKDSVLRHNINKLGLTSIAVEPV
                     AAWKLNERHSFGAGIIAQHTSAELRKYADWGIPKKAQMLQATPSNPTAAAQIKADGHA
                     DVKGSDWGFGYQLAWMWDINDRARVGVNYRSKVSHTLKGDAEWAADDAMAKQLWNSNM
                     LAPLGYTANEKARVKIVTPESLSVHGMYKVSDKADLFGDVTWTRHSRFDKAELVFEKE
                     KTIVNGKSDRTTITPNWRNTYKVGFGGSYQISEPLQLRAGIAFDKSPVRNADYRMNSL
                     PDGNRIWFSAGMKYHIGKNHVVDAAYTHIHINDTSYRTAKASGNDVDSKGASSARFKN
                     HADIIGLQYTYKFK"
BASE COUNT          929 a         1075 c          879 g          684 t
ORIGIN      
        1 aaacagttca atgagtttat tttgtttata ccggcttaga cgactttttc tcatagggat
       61 aattctaact taatttgaat ttccctagtt atctaggaca gctccaaaaa taaatttagc
      121 ctaagtcata aaaccgtgta attttgcacc aaaaaagacg gtttgcaggt aaaatatcaa
      181 actattaatt taaatcatat ttttacagaa tattccgccg cattcatcaa atggacatca
      241 aaccggttcc aaatttctgt aattttgcaa caaaataccg caaaacaccc gattgagacc
      301 gaaaggactt tcatatgaac cagacaagcc gcgatctgac ccgcatcagc cacaacacca
      361 aaatcgtcgc caccttgggg ccgggcagca acaacgtcga actgttggaa gacatgatcc
      421 gcgtcggcgg tctgaacgtc gtccgcttca acttcagcca cggcacgccc gaattccatc
      481 aggaaaacgc ccgcattgtg cgcgaggcgg caaaacgcgc cggacaggaa atcgccatca
      541 ttgccgacct gcaagggccg aaaatccgcg tgggcaaaat cgccggcggc ggcatcgaat
      601 tgaacaaagg cgaaacgctg gtactggatg ccgcgctcga aggcgaaggc acgcgcgagg
      661 cggtcggttt ggactaccgc gacctgcccg acgacgttac cgcaggcgac gtattgtggc
      721 tggacgacgg cctgctgacc ctgaccgtgg aatccgtcga aggcagcagg attatcacaa
      781 gggtggaaaa cagccatgtc ctgaaaagca acaaaggcat caacaaacgc ggcggcgggc
      841 tgtccgcagg cgcgttgacc gaaaaagact tccgcgacct gaaaaccgcg attgccatcg
      901 gttgcgacta cctcgccatc agctttgtga aatctgccga agatttgcac atcgcgcgcg
      961 ccaaagtcga agaagaaatg aagggcagca ctgccgtgcg ccccggtttg gtttccaaaa
     1021 tcgaacgcgt agaagcgatt gaaaaccttg atgaaatcat cctcgccggc gacggcatta
     1081 tggttgcgcg cggcgacttg gcggtcgaag tcggacacgc cgccgtcccc gccctgcaaa
     1141 aacggatgat ccgccgcgcc cgcgagttgc gccgcttcag cattacggcg acgcaaatga
     1201 tggaatcgat gattaccaac cccgtgccga cccgcgcgga agtcagcgat gtggcaaacg
     1261 cggtattgga cggtaccgat gcggtgatgt gttccgccga aaccgccgtc ggcgcgtatc
     1321 cgtttgaaac cgtcagccaa atggcaatta tctgcgcggc tgcggaaaaa gagcaggatt
     1381 cgctcaacgg cgttgccgaa caggcggagt atcccgaagc ggtcagcacc aacctggcgg
     1441 ttgccggcgg cgcggtcagc gtggcgcgcg cggttcacgc caaagcgatt gtcgccctga
     1501 ccgaaagcgg ttcgaccgcc tttgaaatca gccgccacaa catcaccctg ccgattttcg
     1561 cgctgacccc gagcgtttcc gcccaacgcc gtatggcgat gtaccgcggc gtgcgcccgc
     1621 tgattttggc aaccagtacc gaccacgaca cggcgttgaa cgaagtcgaa accatgctgg
     1681 tggaacacaa catcctgcat tccggcgacc aatacatcat caccagcggc tcgcaaatgc
     1741 gcgaatccgg ttcgaccaat acgctggaag tgctgcgcgt caaataatcc gccctgagtg
     1801 gaaaatgccg tctgaagtcg atgcccgagg cttcagacgg cattttttgc ggcggcgcgg
     1861 cggttcaggc aaactgaaaa aattgtgcaa atccggcaac atcagataaa attgagtacc
     1921 tatactaaag cgaaacaagg catttccgac tgcctttttt atagtggatt aaatttaaac
     1981 cagtacagcg ttgcctcgcc ttgccgtact atctgtactg tctgcggctt cgtcgccttg
     2041 tcctgatttt tgttaatcca ctatatttat ccaccgtccg cctttttacg gaaaccgaaa
     2101 tgaccccttc cgcactgaaa aaaaccgtcc tgctgctcgg cactgccttt gccgccgcat
     2161 ccgcacaagc ctccggctac cacttcggca cacagtcggt caacgcgcaa agcacggcga
     2221 atgccgccgc cgcagaagcc gccgacgcat cgaccatctt ctacaacccc gccggcctga
     2281 ccaaactcga cagcagccag atttccgtca acgccaatat cgtatttcca agcatccgtt
     2341 atgaagcgga ttccgccacc gactttaccg gcattcccgt ccaaggttcg aaaagcggca
     2401 aaatcaccaa aaccacggtt gcgccccaca tctacggcgc atacaaagtc aacgacaatc
     2461 tgaccgtagg cttgggcgtg tacgtcccct tcggctctgc caccgaatac gaaaaagatt
     2521 ccgtattgcg ccacaacatc aacaaactcg gtctgaccag catcgccgtc gaacccgtcg
     2581 ccgcgtggaa actcaacgaa cgccattcct tcggcgcagg catcatcgcc caacatactt
     2641 ctgccgagct gcgcaaatat gccgactggg ggatcccaaa aaaagcgcaa atgctgcaag
     2701 caacaccttc taatcctact gccgctgctc aaatcaaagc cgacggacac gccgatgtca
     2761 aaggcagcga ttggggcttc ggctaccaac tggcgtggat gtgggacatc aacgaccgcg
     2821 cacgcgtggg cgtgaactac cgttccaaag tctcacacac gctcaaaggc gatgccgaat
     2881 gggcggcaga cgacgcaatg gcgaaacaac tgtggaatag caatatgctc gcaccgctcg
     2941 gctacacggc gaatgaaaaa gcccgcgtta aaatcgttac gcctgagtct ttgtccgtac
     3001 acggtatgta caaagtgtcc gataaagccg acctgttcgg cgacgtaact tggacgcgcc
     3061 acagccgctt cgataaggcg gaactggttt ttgaaaaaga aaaaaccatc gtcaacggca
     3121 aatccgaccg caccaccatc acccccaact ggcgcaacac ctacaaagtc ggcttcggcg
     3181 gttcttatca aatcagcgaa ccgctgcaac tgcgcgccgg catcgctttt gacaaatcgc
     3241 ccgtccgcaa cgccgactac cgcatgaaca gcctgcccga cggcaaccgc atctggttct
     3301 ccgccggcat gaaataccat atcggcaaaa accacgtcgt cgatgccgcc tacacccaca
     3361 tccacatcaa cgacaccagc taccgcacgg cgaaggcaag cggcaacgat gtggacagca
     3421 aaggcgcgtc ttccgcacgt ttcaaaaacc acgccgacat catcggcctg caatacacct
     3481 acaaattcaa ataaacggcc cgccgtttga ttgtagaaat gccgtctgaa acagatttcc
     3541 gtttcagacg gcattgtttt aggctcg
//
LOCUS       DBBZXU010000143         3559 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.143, whole genome shotgun sequence.
ACCESSION   DBBZXU010000143 DBBZXU010000000
VERSION     DBBZXU010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.143"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(654..1505)
                     /locus_tag="ACJJDE_001950"
     CDS             complement(654..1505)
                     /locus_tag="ACJJDE_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase subunit sigma"
                     /protein_id="HGG7541817.1"
                     /translation="MTLLGIKLKQTQQLNQRLQQSLRVLQMSGIELEREVENWLSDNP
                     LLERKDTDEFSDAEFSHYTAPARQIGGDEGEDMLSNIAGEQDFKQYLHAQVCEHPLSD
                     QESACVHILIDFLDEQGYLTDSIEDILDHTPLEWMLDEAMLKQALTALKKFDPAGVAA
                     ADLNESLILQIERSGECAAKPSALHIVRNALDSIDGNRSQTLARIKKRLPQTDSGTLE
                     AALDLIASLNPFPAAGFASSTPTPYSDEALANLLAFRGMEVSRRTIAKYRESFEIPAA
                     HKRKTAE"
     gene            1853..3367
                     /gene="katA"
                     /locus_tag="ACJJDE_001951"
     CDS             1853..3367
                     /gene="katA"
                     /locus_tag="ACJJDE_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002218620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase KatA"
                     /protein_id="HGG7541818.1"
                     /translation="MTTSKCPVTHLTMNNGAPVADNQNSLTAGPRGPLLAQDLWLNEK
                     LADFVREVIPERRMHAKGSGAFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFTTVAG
                     ERGAADAERDIRGFALKFYTEEGNWDVVGNNTPVFFLRDPRKFPDLNKAVKRDPRTNM
                     RSATNNWDFWTLLPEALHQVTIVMSDRGIPAGYRHMHGFGSHTYSFWNEAGERFWVKF
                     HFRTQQGIKNLTNEEAAKIIADDRESHQRDLYEAIERGEFPKWTMYIQVMPEADAEKV
                     PYHPFDLTKVWPKKDYPLIEVGEFELNRNPENFFADVEQSAFAPSNLVPGVGASPDKM
                     LQARLFNYADAQRYRLGVNFRQIPVNRPRCPVHSNQRDGQGRADGNYGSLPHYEPNSF
                     GQWQQQPDFAEPPLKINGDAAHWDYRQDDDDYFSQPRALFNLMNDAQKQALFGNTAAA
                     MGDAPDFIKYRHIRNCYRCDPAYGEGVAKALGLTVEDAQAARATDPALGQAGLL"
BASE COUNT          878 a          970 c          882 g          829 t
ORIGIN      
        1 ttcaaaaaca gaaatcccaa accctcggca ttcccgccaa accctcgtca ttctcgcgaa
       61 agcgggaatc caggttcgtt gagtttcggt catttccgat aaattcttgc aactttgcgt
      121 ttctagattc ccactttcgt gggaatgacg gtaaagattg agacctttgc aataacatag
      181 gttactaaaa ttttatgctc aatctcattt tcaaaatgca aaacttttct gatttctcct
      241 actttttgct caatattagg aaggttttag gcaattgaaa attttttggc gcatttttat
      301 gcgtcaaatt tcgttaacag attatttttg caaaggtctc agattgctgt tttcccgaca
      361 aattcccgcc atctaaaatc tcgttatcca tacaagaacc gaaaatcttg ccattctcac
      421 aaaaacagaa attcaaaaac agaaatccca aacccccgtc attcccgcga aagcgggaat
      481 ccaggttcgt tgagtttcgg tcatttccga taaattcttg cagctttgcg tttctagatt
      541 ccctctttcg cgggaatgac gggatgcagg tttccgcgcg gacggattcg gcattcccgc
      601 tttcgcagaa atgccggctt ttggtttgtt gtctttataa gattattcgg caattattct
      661 gcggttttgc gtttgtgtgc tgccggaatc tcaaaggatt ctctgtattt ggcaatggtg
      721 cggcgagaaa cctccatgcc gcggaaagcc agcaggttgg cgagcgcctc gtcagaatac
      781 ggcgtgggcg tggacgaggc aaaaccggcg gcgggaaagg gattgagcga agcaatgagg
      841 tcgagtgcgg cttcgagtgt gccgctgtcg gtttggggca ggcgtttttt tattcgcgcg
      901 agggtttggc tgcggttgcc gtcaatgctg tcgagggcgt ttcggacgat atgcagggcg
      961 gagggtttgg cagcacattc gcccgatctt tctatctgca gtatcagcga ttcgttcaaa
     1021 tcggcggcgg ccacgcctgc cgggtcgaat tttttcaatg cggtcagggc ttgtttcagc
     1081 attgcttcat ccaacatcca ctccaagggc gtatggtcga ggatgtcttc gatgctgtcg
     1141 gtcagataac cttgctcgtc aaggaaatcg atgaggatgt ggacacaggc ggattcttgg
     1201 tcggaaagcg ggtgttcgca tacttgcgcg tgcaggtatt gcttgaaatc ctgctcgccg
     1261 gcgatgttgg acagcatatc ttcgccttcg tctccgccga tttgacgggc aggcgcagtg
     1321 taatggctga actcggcatc ggaaaattca tccgtgtctt tgcgttcgag cagggggttg
     1381 tccgacagcc agttttcgac ctcgcgttca agttcgatac ccgacatctg caatacgcgc
     1441 aaagattgtt gcagccgctg gttgagctgc tgggtctgtt tgagctttat tccgagtaag
     1501 gtcatgataa tgtggggaaa attgttattt tcagcctgtc ggcgcaaaaa atgccgcaaa
     1561 gcgtcattgc attataaatg gttttaatga gcgggttcgg attccgttcg ataacaaaaa
     1621 acaaacgaaa atcaagaacc gattgcttat aataatatta aatcgatttc atagttttaa
     1681 tagcgaaaat cttggcgtat agtcgcatcc atagttttta caaaagggaa ataaaatgtc
     1741 gattcaagaa atttattgca atcaagaaac cggttacgaa tacgctttcc gccaaatcgt
     1801 actgtaagcc gtttaccccc atttgaccaa cctgagaaaa ggaacaagag cgatgactac
     1861 ctccaaatgc cctgtaaccc atctgaccat gaacaacggc gcgcctgttg ccgacaatca
     1921 aaacagcctg accgccggtc ctcgcggccc tctgctggcg caggatttgt ggctgaatga
     1981 aaaactcgcc gacttcgtgc gcgaagtcat ccccgaacgc cgtatgcacg ccaaaggttc
     2041 gggcgcgttc ggtacgttta ccgtaacgca cgacatcacc aaatacaccc gcgccaaaat
     2101 cttcagcgaa gtcggcaaaa aaaccgagat gttcgcccgt ttcaccaccg tggcaggcga
     2161 acgcggcgca gccgatgcag aacgcgacat ccgcggtttt gccttgaaat tttataccga
     2221 agaaggcaac tgggatgtgg tcggcaacaa cacgcccgtg ttcttcctgc gcgacccgcg
     2281 taagttcccc gacctgaaca aagccgtcaa acgcgacccg cgcaccaata tgcgctctgc
     2341 cacaaacaac tgggacttct ggacgctgct gcccgaagca ctgcaccaag ttaccatcgt
     2401 gatgagcgac cgcggcatcc ccgccggcta ccgccatatg cacggcttcg gttcgcatac
     2461 ctacagcttc tggaacgaag caggcgagcg tttttgggtg aaattccatt tccgcaccca
     2521 acaaggcatt aaaaacctga ccaacgaaga agccgccaaa atcatcgccg acgaccgcga
     2581 aagccatcag cgcgacttat acgaagccat cgaacgcggc gagtttccga aatggacgat
     2641 gtacatccaa gtcatgcctg aagcagacgc ggaaaaagta ccttatcatc cgtttgactt
     2701 gaccaaagtt tggccgaaaa aagactatcc gctgattgaa gtgggcgaat tcgagttgaa
     2761 ccgcaatccc gaaaacttct tcgccgatgt ggaacaatcc gccttcgcac cgagcaacct
     2821 cgttcccggt gtcggcgcca gcccagataa aatgttgcaa gcccgtttgt tcaattacgc
     2881 cgacgcgcaa cgctaccgct tgggcgtgaa cttccgccaa atccctgtca accgtccgcg
     2941 ttgccctgtt cacagcaacc agcgcgacgg acaaggacgc gccgacggca actacggcag
     3001 cctgccgcac tacgaaccca acagcttcgg ccaatggcag cagcagcccg acttcgccga
     3061 accgcctttg aaaatcaacg gcgacgcggc gcactgggac taccgccaag acgatgacga
     3121 ctatttcagc caaccgcgcg ccctgttcaa cctgatgaac gacgcgcaga aacaggcatt
     3181 gttcggcaac accgccgccg caatgggcga cgcgcccgac ttcatcaaat accgccatat
     3241 ccgcaactgc taccgttgcg atccggcata cggcgaaggc gtggcaaaag ccctcggact
     3301 gactgtcgaa gacgcacaag ccgcccgcgc gaccgacccc gcactgggtc aggccggttt
     3361 gctgtaaggg ggcattatgt ggatggaaat tgaagaaatc ctgtcccgcg ccgtccgcta
     3421 ccggaaataa ccgggcataa aaatgccgtc tgaaacgtcg tttgaccgct tcagacggca
     3481 tttccccatc ccgcccccgc cgtttcagtg ggcgtttttt attaaacgca aaatatcccg
     3541 tcattcccgc cccacagcc
//
LOCUS       DBBZXU010000144         3472 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.144, whole genome shotgun sequence.
ACCESSION   DBBZXU010000144 DBBZXU010000000
VERSION     DBBZXU010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3472
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.144"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..330
                     /locus_tag="ACJJDE_001952"
     CDS             <1..330
                     /locus_tag="ACJJDE_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7541819.1"
                     /translation="RDGEDGGLLCKFFPDILACDRLPEPNPAEDLNLPSETVNVEFQK
                     SGIFQNSAQCPAPVTFTVTVLDSSRQFAFSFENACTIAERLRYMLLALAWAVAAFFCI
                     RTVSREV"
     gene            634..918
                     /locus_tag="ACJJDE_001953"
     CDS             634..918
                     /locus_tag="ACJJDE_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2523 domain-containing protein"
                     /protein_id="HGG7541820.1"
                     /translation="MKLLAALIPLLMSVAGRILTALGLMAVTYSGVDRLVAHFQQAIT
                     SSITGAPQAMLQLFYISGGGTVLNILFGAIAFILSFKQMTKLATSIGKKK"
     gene            919..2106
                     /locus_tag="ACJJDE_001954"
                     /pseudo
     CDS             919..2106
                     /locus_tag="ACJJDE_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011798737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="zonular occludens toxin family protein"
     gene            2321..3277
                     /locus_tag="ACJJDE_001955"
     CDS             2321..3277
                     /locus_tag="ACJJDE_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISNgo3 family transposase"
                     /protein_id="HGG7541821.1"
                     /translation="MNIIGLDISKDTIDATLHKTNGSIHYIKFKNNDDGLKQFRLWIK
                     GNRIRKAYIGMEATGIYYEKAADMLSSYYTVYVINPLKIKDYGKSRFNRTKTDKADSN
                     LIADYIKRHQDTLIPYQIPKNKALQKLINLKNQLQQHQKQIKNRLHSTEEDFIRNIHQ
                     DLIDTIQDKMEQVKIAISEQIKKQTDYNHYRNLQTIPSIGKDTASVLYAQLTEKHFKT
                     ANQFVSYAGLSPAIIQSGTSVRGRGRLSRYGNRRLKSTLYMPALCAYRFNAFPKLINN
                     LKKAGKPKMVIIVAIMRKLAKLAYYIVKTGQPYDAERHRLNQ"
BASE COUNT         1136 a          753 c          786 g          797 t
ORIGIN      
        1 agggacggcg aagacggcgg ccttttgtgc aaattcttcc ccgacattct cgcttgcgac
       61 aggctgcccg agcccaatcc ggcagaagat ttaaatctgc cgtctgaaac cgtcaatgta
      121 gagtttcaga aatcaggaat ctttcaaaat tccgcacagt gtcccgcacc tgtcactttc
      181 acagtgactg tgcttgattc cagcaggcag ttcgcgttca gctttgagaa cgcatgtacc
      241 atagccgaac ggctaaggta catgcttctc gcccttgctt gggcggttgc cgcatttttc
      301 tgtatccgca cagtatcccg tgaagtctag caggcgcagc accgccgggc ttcagtaact
      361 tgtaccaagg caggaggagg acgtccagaa agatttgtaa agacggcttt atcgtcttta
      421 taaatctttt tggatacccc ttgccgcccc gccaaaagaa tacactctgc cgcaagggca
      481 ggtggtaagg cgcgcgcttt ttgcgccgtt ccccctgccc ccgcggcgtc gcaagtgaga
      541 ctgggggtgt gggggctagt ccccgcaaaa tctttcagat taagaaacat ttttttaatg
      601 aggcaaccgt gccttttaag aaagggatag caaatgaaat tgttggccgc attgattccg
      661 ctgttgatga gcgtcgcagg ccgtatattg actgcattag gcttgatggc tgttacttat
      721 tcgggtgtag atagattggt agcccatttt cagcaggcga taaccagtag cataacgggc
      781 gcgcctcaag cgatgttgca gctcttttat ataagcggtg gcggcaccgt tcttaatatc
      841 ctgtttggcg cgatcgcctt tattctgtca ttcaaacaaa tgacaaaact agcaacctca
      901 atcgggaaga aaaaataaat ggcagagatc tgtttgataa ccggcacgcc cggttcaggg
      961 aaaacattaa aaatggtttc catgatggcg aatgatgaaa tgtttaagcc tgatgaaaac
     1021 ggcatacgcc gtaaagtatt tacgaacata aaaggcttga aaataccgca cacctacata
     1081 gaaacggacg caaaaaagct gccgaaatcg acagatgagc agctatcggc gcatgatatg
     1141 tacgaatgga taaagaagcc cgaaaatatc gggtctattg tcattgtaga tgaagctcaa
     1201 gacgtatggc cggcacgctc ggcaggttca aaaatccctg aaaatgtcca atggctgaat
     1261 acgcacagac atcagggcat tgatatattt gttttgactc aaggtcctaa gcttctagat
     1321 caaaatctta gaacgcttgt acggaaacat taccacatcg cttcaaacaa gatgggtatg
     1381 cgtacgcttt tagaatggaa aatatgcgcg gacgatcccg taaaaatggc atcaagcgca
     1441 ttctccagta tctatacact ggataaaaaa gtttatgact tgtacgaatc agcggaagtt
     1501 cataccgtaa ataaggtcaa gcggtcaaag tggttttaca ctctgccagt aatagtattg
     1561 ctgattcccg tgtttgtcgg cctgtcctat aaaatgttga gcagttacgg aaaaaaacag
     1621 gaagaacccg cagcacaaga atcggcggca acagaacagc aggcagtact tccggataaa
     1681 acagaaggcg agccggtaaa taacggcaac cttaccgcag atatgtttgt tccgacattg
     1741 tccgaaaaac ccgaaagcaa gccgatttat aacggtgtaa ggcaggtaag aacctttgaa
     1801 tatatagcag gctgtataga aggcggaaga accggatgcg cctgctattc gcatcaaggg
     1861 acggcattga aagaagtgac ggagttgatg tgcaaggact atgtaaaaaa cggcttgccg
     1921 tttaacccat acaaagaaga aagccaaggg caggaagttc agcaaagcgc gcagcaacat
     1981 tcggacaggg cgcaagttgc cacattgggc ggaaaaccgt agcagaacct aatgtacgat
     2041 aattgggaag aacgcgggaa accgtttgaa ggaatcggcg ggggcgtggt cggatcggca
     2101 aactgaagaa aacggcaaga gagaaaaaag acccgtaaac cgtttgaata tagacggttt
     2161 acgggtcttt gtttcgcgca aagcaagggc taaggcagtc aggcagcaaa tcccgcaatg
     2221 tattaaaaca gacgcgtaga aatgccggct gcctttatcc atcctcaaaa ttgaatatca
     2281 tcctagccgt atcaaggctg tataaataag gaaaatacca atgaatataa tcgggctgga
     2341 catctcaaag gataccatag acgcaacatt gcataaaaca aacggaagta tccattacat
     2401 taaatttaag aataatgatg atggattaaa acagtttaga ttgtggataa agggaaacag
     2461 aatcagaaaa gcctatatcg gcatggaggc aacaggcatc tattacgaaa aggcagcaga
     2521 tatgctttct tcctactata ccgtttacgt tatcaatccc ttaaaaatca aggactacgg
     2581 gaaaagcagg tttaaccgta ccaaaaccga caaagcagat tcaaacctga tagcagatta
     2641 cataaaaagg catcaagata cattgatacc gtatcagata cccaaaaaca aagcactgca
     2701 aaaactgatt aaccttaaaa atcaattaca gcaacatcag aagcaaatta aaaaccgtct
     2761 tcatagcact gaagaagact tcataaggaa catacatcaa gacttgatag ataccataca
     2821 ggacaagatg gaacaggtaa aaatagccat atccgaacaa atcaaaaaac aaacggacta
     2881 taaccattac cgcaatcttc aaaccatccc gagcataggc aaagacaccg catcagttct
     2941 ttatgcgcaa ctgacagaaa aacattttaa aaccgcaaac cagtttgtat cctatgccgg
     3001 attaagtccc gccatcatac aatcagggac aagcgtaaga ggtcggggca gattgagccg
     3061 atacggaaac agacgattaa aaagtacgct gtatatgccc gccctttgtg cttaccgttt
     3121 taacgcattt ccgaaattaa taaataatct gaaaaaagcg ggtaagccaa agatggtaat
     3181 tatcgttgcc atcatgcgca aactggcgaa gctcgcctat tatattgtta aaaccggcca
     3241 gccttacgat gcggaaagac accgattgaa tcaataaaat tcaacaaaat taaacggtta
     3301 cgcgaatata tttgtgtaac cgtgcatttg catatcgtaa ataaacgtaa ataaaaataa
     3361 caatataaat cagtatattg caactttgtt ttttattttg tgttgacggg caacatatca
     3421 tctgcgcggg aatgacgaat ccatccgtac ggaaacctgc accacgtcat tc
//
LOCUS       DBBZXU010000145         3447 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.145, whole genome shotgun sequence.
ACCESSION   DBBZXU010000145 DBBZXU010000000
VERSION     DBBZXU010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3447
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.145"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..190
                     /locus_tag="ACJJDE_001956"
     CDS             <1..190
                     /locus_tag="ACJJDE_001956"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541822.1"
                     /translation="RRGNAVLVFVSLLYIVTKHLMRQHKPGKTLQNFANRLRNIGGYW
                     DFLIFKDGFGVFLSNERI"
     gene            complement(247..1311)
                     /locus_tag="ACJJDE_001957"
     CDS             complement(247..1311)
                     /locus_tag="ACJJDE_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HGG7541823.1"
                     /translation="MEKEFRILNIVSAKIWGGGEQYVYDVSKALGLRGCTMFTAVNKN
                     NELMHRRFSEVSSVFTTRLHTLNGLFSLCALTRFIRKNRISHLMIHTGKIAALSILLK
                     KLTGVRLIFVKHNVVANKTDFYHRLIQKNTDRFICVSRLVYDVQTADNPFKEKYRIVH
                     NGIDTGRFPPSQEKPDSRFFTVAYAGRISPEKGLENLIEACVILHRKYPQIRLKLAGH
                     GHPDYMCRLKRDVSASGAEPFVSFEGFTEDIASFYRQSDVVVLPSLVPEAFGLSLCEA
                     MYCRTAVISNTLGAQKEIIEHHQSGILLDRLTPESLADEIERLVLNPEAKNALATAGH
                     QCVANRFTINHIADKLLDAI"
     gene            complement(1312..2070)
                     /locus_tag="ACJJDE_001958"
     CDS             complement(1312..2070)
                     /locus_tag="ACJJDE_001958"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HGG7541824.1"
                     /translation="MKKVSVLIVARNEANHIRECIESCRFDKEVIVIDDHSTDNTAEI
                     AEGLGAKVFQRHLNGDFGAQKTFAIEQAGGEWVFLIDADERCTPELSDEISKIVQTGD
                     YAAYFVERRNLFPNHPATHGAMRPDSVCRLMPKKGSSVQGKVHETVQTPYPKRRLKHF
                     MYHYTYDNWEQYFNKFNKYTSISAEKYREQGKPVRFVRDIILRPIWGFFKIYILNKGF
                     LDGKMGWIMSVNHSYYTMIKYVKLYYLYKSGGKF"
     gene            complement(2145..2220)
                     /locus_tag="ACJJDE_001959"
     tRNA            complement(2145..2220)
                     /locus_tag="ACJJDE_001959"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(2185..2187),aa:Ile,seq:cat)
     gene            complement(2274..>3447)
                     /locus_tag="ACJJDE_001960"
     CDS             complement(2274..>3447)
                     /locus_tag="ACJJDE_001960"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HGG7541825.1"
                     /translation="FGIRQNASCENIVDWHERFPELEAQLGAPIEDYAPPKHWTRKQL
                     RSMGRVSYLCVDAAEQALTDAGLLGDESITDGRMGVACGSSSGSTKDIGDVGELLLTG
                     TSRNFSANTYVRMMPHTAAANIGIFFGLKGRIIPTSSACSSGSQGIGYAYEAIKYGLT
                     DMMLAGGGEEFFSSEVYVFDSLYAASRRNGEPEKTPRPYDANRDGLVIGEGAGIFVLE
                     ELEHAKRRGAIIYAELVGYGANSDAYHISTPRPDAQGAILAFQTALQHAGLAPEDIGW
                     INLHGTGTHHNDSMESRAVAAVFGNNTPCTSTKPQTGHTLGAAGAIEAAFAWGIADRQ
                     SNPEGKLPPQLWDGQNDPNLPAINLTGSGSRWETEKRIAASSSFTFGGSNCVLIIG"
BASE COUNT          779 a          842 c          914 g          912 t
ORIGIN      
        1 aaggcgaggc aacgctgtac tggtttttgt tagtctacta tacattgtaa caaagcactt
       61 gatgcggcag cacaagccgg ggaagacgct gcaaaacttt gccaataggc tgcgtaatat
      121 cgggggatat tgggattttc ttatttttaa ggatggattc ggggtgtttc tttccaatga
      181 acgaatataa tttggcggtt tgttgcatca aaggctttca gacggcatat gccgtctgaa
      241 agcggcttat attgcatcca ataatttgtc ggcgatatgg ttgatggtaa aacggttggc
      301 gacgcattga tgccctgccg ttgccagtgc gttttttgct tcggggttta agacgaggcg
      361 ttcgatttca tccgccaaag attcaggtgt cagcctgtcc agcagaatcc ccgattgatg
      421 atgttcgata atttcctttt gcgcgcccaa agtattggaa atcactgccg ttcggcagta
      481 catcgcctcg cataatgaca aaccgaatgc ctccgggacg aggctgggca aaaccacgac
      541 atcgctttgg cggtaaaacg aagcaatgtc ttcggtaaac ccttcaaaag aaacaaatgg
      601 ttctgctcct gaagcagata cgtcccgctt caggcggcac atataatccg gatgtccgtg
      661 ccctgccaat ttgagtctga tttgaggata tttccgatgc agtatcacac aggcttcaat
      721 caggttttcc aatccttttt ccggactgat cctgccggcg taggcgacgg taaaaaaacg
      781 gctgtcgggt ttttcttgag agggagggaa acggccggta tcgataccgt tatgaacaat
      841 ccggtatttt tctttaaagg gattgtcggc ggtttgcaca tcgtaaacca gacgggaaac
      901 gcaaataaag cggtctgtgt ttttctgtat caggcggtga taaaaatcgg ttttgttggc
      961 gacgacattg tgtttgacaa atatcaggcg caccccggtc agttttttca aaagtatgga
     1021 taaggcggca attttgccgg tgtgtatcat caggtgggaa atgcggtttt tccgaataaa
     1081 gcgggtaagc gcgcagagcg aaaacagccc gttgagcgtg tgaaggcgtg tcgtgaaaac
     1141 ggaagaaact tcggaaaagc gtctgtgcat caactcatta tttttattga cggcggtaaa
     1201 catcgtgcag ccccgcagtc ccaatgcttt tgaaacatca tagacatatt gttcgccccc
     1261 gccccaaatc ttggccgata cgatatttaa tatcctgaat tctttttcca tttaaaattt
     1321 tccgccggat ttgtacagat aatatagttt gacatattta atcattgtgt aatagctgtg
     1381 gttgacggac ataatccaac ccatttttcc atcgagaaac cctttgttca ggatataaat
     1441 tttgaaaaac ccccaaattg ggcggaggat aatgtcccta acgaaacgca cgggctttcc
     1501 ctgctctcgg tatttctcgg ctgaaatgga agtatatttg ttgaatttgt tgaaatattg
     1561 ttcccagttg tcgtacgtat aatggtacat aaaatgtttc agacggcgtt tagggtaggg
     1621 ggtctgtacg gtttcgtgta ctttgccttg caccgaactg cctttcttcg gcatcaaacg
     1681 gcatacgctg tcgggacgca tcgcgccgtg tgtggcggga tggttgggga aaaggttgcg
     1741 gcgttcgaca aaataggcgg cataatcgcc ggtttggaca atttttgaga tttcatcaga
     1801 tagttccggc gtgcagcgtt cgtctgcatc aatcaggaaa acccattctc cgcctgcctg
     1861 ttcgatggca aatgtttttt gcgctccgaa atccccgttc aaatgccgtt ggaagacttt
     1921 tgcgcccaaa ccctcggcaa tttcggcagt attgtcggtg ctgtggtcat cgataacgat
     1981 aacttcttta tcgaaacggc aactttcaat acattcccga atgtggtttg cttcatttct
     2041 agcaacaatc aatacgctga cttttttcat tatcaaggtt tctcaaagca ttttggtttc
     2101 acagggcggc aaaaaagccc aaacatacgt ccgggcttgg gaattggtgg gtccggtggg
     2161 gttcgaaccc acgaccaagg gattatgagt cccctgctct aacccctgag ctacagaccc
     2221 gtcaagagta ggcgcgtatt gtatagcata gcggtgggat tgacaaactt atttcatccg
     2281 atgattaaga cgcagttgct tcccccgaag gtaaacgatg agctggcggc aatgcgtttt
     2341 tcggtttccc agcggctgcc gctgccggtc aggttgatgg cgggaaggtt cggatcgttc
     2401 tgcccgtccc aaagctgggg cggaagtttt ccttcgggat tgctttgccg gtcggcaatg
     2461 ccccacgcga acgcggcttc gattgcgccc gccgcaccca gcgtgtgtcc ggtttgcggc
     2521 ttggtggacg tgcagggcgt attgttgccg aaaaccgctg caacggcacg gctttccata
     2581 ctgtcgttgt ggtgcgtccc ggtgccgtgc agattaatcc agccgatgtc ttcgggcgca
     2641 agacctgcgt gttgcaatgc cgtctgaaag gcaaggattg cgccttgcgc gtcggggcgg
     2701 ggcgtggaaa tatggtaggc atcgctgttg gctccgtagc cgacgagttc ggcgtaaatt
     2761 atcgcaccgc gccgtttggc gtgttccaat tcttccagca cgaaaatccc cgcgccttcg
     2821 ccgatgacca gcccgtcgcg gttcgcgtcg tatgggcgcg gggttttttc cggttcgccg
     2881 ttgcggcggc tggcggcata aagcgagtcg aaaacataca cttcggacga gaaaaattct
     2941 tcgcctccgc ccgccagcat catatcggtc agaccgtatt tgatggcttc gtaggcataa
     3001 cctatgcctt ggctgccgga cgaacacgcg ctcgatgtcg ggatgatgcg tcctttcagt
     3061 ccgaaaaaga tgccgatatt ggcggcggcg gtgtgcggca tcatacgcac ataggtgttg
     3121 gcactgaagt tgcgcgacgt gccggtcagc aacaattcgc ccacatcgcc gatgtctttg
     3181 gtgctgccgc tggaagagcc gcaggcaacg cccatccgtc cgtcggtaat gctttcgtct
     3241 ccgagcaaac cggcatccgt caaagcctgc tccgccgcat cgacgcacaa atacgacaca
     3301 cgccccatac ttctgagctg cttgcgcgtc caatgtttcg gcggcgcgta atcctcaatc
     3361 ggcgcaccca gttgcgcttc caattcgggg aaacgttcgt gccaatccac tatattttcg
     3421 caagacgcgt tttgcctgat tccaaaa
//
LOCUS       DBBZXU010000146         3340 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.146, whole genome shotgun sequence.
ACCESSION   DBBZXU010000146 DBBZXU010000000
VERSION     DBBZXU010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3340
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.146"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(255..557)
                     /locus_tag="ACJJDE_001961"
     CDS             complement(255..557)
                     /locus_tag="ACJJDE_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002254861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541826.1"
                     /translation="MGYRVGMNCFDTRLQADDYLLSSLPPTVTEEGKIIRPERVGDKW
                     ILNGKPVTLSYPECSNFEQIKQGSYVGSTVLILFVVIFGFRLLINFLKDMGKVGTD"
     gene            complement(585..815)
                     /locus_tag="ACJJDE_001962"
     CDS             complement(585..815)
                     /locus_tag="ACJJDE_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003694609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541827.1"
                     /translation="MNIVKKYAVKALLAAGIFTPAIVMADGFDAAAIGTQVANVIMGF
                     VAMVSAVGMAAITVILAIQGFKMAWSMIKSVK"
     gene            complement(1053..1253)
                     /locus_tag="ACJJDE_001963"
     CDS             complement(1053..1253)
                     /locus_tag="ACJJDE_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541828.1"
                     /translation="MKFEERFIVQDLETHDFIYPDPFGDVGFTQNIKSAGQFESYEDA
                     LNSGINEMGGGFQIFQFFVKSE"
     gene            complement(1257..1568)
                     /locus_tag="ACJJDE_001964"
     CDS             complement(1257..1568)
                     /locus_tag="ACJJDE_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541829.1"
                     /translation="MFNQTQTVTYPATFLGAKKFKGEIDGSNIDTCSVLVATPLPAQS
                     GNAVGFTAAQMKFGDSKNFSRLENLKYPCEVMVMVEMTSTGKGMVPSLIDFQVAEKPK
                     G"
     gene            complement(1580..2794)
                     /locus_tag="ACJJDE_001965"
     CDS             complement(1580..2794)
                     /locus_tag="ACJJDE_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HGG7541830.1"
                     /translation="MSEVEYFSHFISDGKGKLLEIPQRRGKQDGVFVDWISFTFHEDT
                     LLKVSGCPLFSDAEYMYVLSRKLEEILGFGITRKCKSRGNKFYESMYRLGSDDVDYGE
                     VHFGGQRNTVLVELKGTGCSVASPGWELRLKQFLDDSIRTRITRIDLALDFFDGEYTP
                     DQALLDHDNGFFDNSNQRPKSETIGTAWRNEDGSGKTFYVGRKKNSRFVRVYEKGRQL
                     GDKESKWVRFEIQFNYGDIEIPLDILINQGSYFCGAFPICRKFKNMPVPERFDQRKKT
                     LNLTFEHKLHYAKNAVGKLVNFMIEMGFDNSEIVESLKADSGFPKGLEPEKYALEMLR
                     DGLKHGFIHEQPDIDLEIELDELGVIAFKNSDKFDREKRLFSPDYDVEKERKYQEYLS
                     KVYHQNVDYDYF"
BASE COUNT         1037 a          787 c          516 g         1000 t
ORIGIN      
        1 ctaaaaatat caaatgaaaa cgaagtttta aaaacccctt ttctaatcaa ttccctataa
       61 taaattaacg cttgtggtaa atctctataa atatgtgaat cagtttgaaa tttaactaaa
      121 tgatattcag aaataaacat aattcggacc ttttaaaaca ctctaaaaag ccgattctac
      181 caaccgttac caaaacagcc aagcaacaga caaagccaag aagaaaccga gaagaaacca
      241 aaaatcaata atcatcaatc agtaccaacc ttgcccatgt cttttaagaa attaatcaga
      301 agcctgaaac cgaaaatgac tacgaacaga attagaaccg tcgaaccgac ataagaacct
      361 tgctttatct gctcaaaatt ggaacattcc ggataagaca acgtaaccgg ctttccgttc
      421 aaaatccatt tatcgcccac cctttccggc ctgatgattt ttccttcttc tgtaacagta
      481 ggaggaagag acgacaataa atagtcgtct gcctgcaatc ttgtatcaaa acagttcatg
      541 ccgacacgat aacccattca cgcgcccctc tttcttcact gccgttattt gacagattta
      601 atcatgctcc aagccatttt gaagccttgg attgccaaaa tgacggtaat ggccgccata
      661 cccacggcgg aaaccatcgc aacgaaaccc atgattacat tcgccacttg cgtaccaatc
      721 gcggctgcat caaagccatc tgccataaca atagccggtg tgaagatacc agctgccaac
      781 aatgctttta cagcatattt tttaacgatg ttcatcgttt ttttcctttt tttgatattt
      841 aaaataagac gacttcttga cttgcttcat ccggacgaag tcttttccga atctcgtttt
      901 tagccgataa aatagaggat tgcgaaaaga aaaagaaaca tacagaccac ccagccgata
      961 attagtgttg caaggttcat tttcatgata tttttccttt gttgcgggct ttgtgaaagg
     1021 ttaacagacc gcccgccgag cctgtttttc ttttattccg attttacgaa gaactgaaat
     1081 atctggaatc ctccgcccat ttcatttatg cctgaattca acgcatcttc gtaactttca
     1141 aattgacctg ctgatttaat attttgagta aaccccacat caccgaacgg atcgggataa
     1201 ataaagtcat gcgtttctaa atcttgaact atgaaacgtt cttcaaattt cataaatcaa
     1261 cctttcggct tttccgccac ctgaaaatca attaatgacg gaaccatgcc tttacctgtc
     1321 gaagtcattt caaccattac cataacttcg cacggatatt tgagattctc taaccttgag
     1381 aaattcttac tatccccgaa cttcatttgt gctgccgtaa atccaacagc attacccgac
     1441 tgtgccggta aaggtgttgc aaccaatacg gaacaagtgt caatgttaga gccatcaatt
     1501 tcacctttga attttttggc tcccaaaaaa gttgcaggat aagttacagt ttgagtttga
     1561 ttaaacattt tgatttcctt taaaaataat cataatctac attttgatga taaactttac
     1621 ttaaatattc ctgatatttc ctttctttct cgacatcata atcaggacta aaaagccttt
     1681 tttccctatc gaatttgtca gaatttttaa aagcaataac ccccaattca tcaagttcaa
     1741 tttccaaatc aatatccggc tgttcatgaa taaaaccgtg tttcaaaccg tcccttaaca
     1801 tttccagagc atatttttca ggttctaatc ctttgggaaa tcccgaatct gcctttaaag
     1861 attccacaat ttcgctatta tcaaaaccca tttcaatcat gaaattgacc agttttccaa
     1921 ccgcgttttt cgcgtaatgc aatttatgct cgaaagttaa attaagcgtt ttctttctct
     1981 gatcaaacct ttcgggaacc ggcatatttt taaattttct acaaattgga aaagctccac
     2041 agaaatacga accctgattt attaaaatat ccaagggtat ttctatatct ccataattaa
     2101 actggatctc gaaccttacc catttgcttt ctttatctcc aagctgcctg cctttctcat
     2161 aaacacgaac aaaacgagaa tttttcttgc gacctacata aaatgtcttg ccgctcccgt
     2221 cctcattccg ccaagccgta ccgatcgttt cagatttcgg cctttgattg ctgttatcaa
     2281 aaaaaccatt atcgtgatct aacaacgcct gatccggcgt gtactctcca tcaaaaaaat
     2341 caagtgctag gtcaattcgc gttattcttg tccttatcga atcatcgaga aactgcttta
     2401 gcctcaactc ccaacccgga cttgcaacgc tgcaaccagt acctttcaac tcaactaaaa
     2461 cagtattgcg ctgacctccg aaatgcacct ctccataatc aacatcatcc gaacctaacc
     2521 tatacatgga ttcatagaat ttgttgcccc ttgatttgca tttgcgcgtt atgccaaaac
     2581 ctagaatttc ttccagcttt ctgcttaata catacatgta ttcagcatca gaaaataaag
     2641 ggcaaccgga aactttcagt aaagtatctt catggaatgt gaatgaaatc caatcaacaa
     2701 aaaccccgtc ttgcttacct cttcgctgcg gaatttctaa aagcttccct tttccgtccg
     2761 atataaagtg tgagaaatat tcaacttcac tcattcgttc actactcttg gaattggttt
     2821 ttaatttcgc tccccccctg ttagtcaagg gggggctttc agccgtttcc cgtcttccgc
     2881 gctaaagcgc gtacgacggt caacgaccga aagccaaatc ctgacaaact tttaaagatc
     2941 aacaaaaaag accacaacca tccgttgtga taatcactgg aaaattcgaa ccaaccgaat
     3001 ctatataatc gaacgcctga taaagctttg aaaaattctc ttgattaatg agtttatgcg
     3061 gttcgccatg tctgaactga taaaaacaca aaacacaaga atctgatttt ttaaatattc
     3121 tccaataaga acaggaaaat attacattta ctgctgacat aaaaaagccc ctttcacttg
     3181 gctgtcaaag gggaatgtta agaaaattaa tgcgcccctt tgatagagcg catcatataa
     3241 ggcgggaatc tagaccgttc ggtttcggtt tttttggtta gtgccgcaac attaaatttc
     3301 tagattccca ctttcgtggg aatgacggcg gagcggtttc
//
LOCUS       DBBZXU010000147         3336 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.147, whole genome shotgun sequence.
ACCESSION   DBBZXU010000147 DBBZXU010000000
VERSION     DBBZXU010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3336
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.147"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..184
                     /locus_tag="ACJJDE_001966"
     CDS             <1..184
                     /locus_tag="ACJJDE_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541831.1"
                     /translation="FVNPLYRHSRKNKKIKNTKLKYRHSRAGGNLGLSVRKLIGKNGF
                     SNPETPDSCFRGNPVF"
     gene            complement(502..747)
                     /locus_tag="ACJJDE_001967"
     CDS             complement(502..747)
                     /locus_tag="ACJJDE_001967"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541832.1"
                     /translation="MPSELQTAFPASQLQRERTHTAIPAKNRKSKKKPKIRHSRAGGN
                     PIRPVSVFFEFQVTSKPPFPQKRESRNSKLQEFIKND"
     gene            complement(760..1344)
                     /gene="rnhB"
                     /locus_tag="ACJJDE_001968"
     CDS             complement(760..1344)
                     /gene="rnhB"
                     /locus_tag="ACJJDE_001968"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HGG7541833.1"
                     /translation="MHILTAGVDEAGRGPLVGSVFAAAVILPEIFDLPGLTDSKKLSE
                     KKRDALAEMIKNQAVAWHVAAASPEEIASLNILHATMLAMKRAVDGLAVRPERIFIDG
                     NRIPEHLNIPAEAVVKGDSKIIEISAASVLAKTARDAEMYALAQRHPQYGFDKHKGYG
                     TKQHLEALKQYGVLPEHRRDFAPVRNLLAQQTLF"
     gene            complement(1412..3307)
                     /gene="mnmG"
                     /locus_tag="ACJJDE_001969"
     CDS             complement(1412..3307)
                     /gene="mnmG"
                     /locus_tag="ACJJDE_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003690010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HGG7541834.1"
                     /translation="MTHMIYPKTYDVIVVGGGHAGTEAALAAARMGAQTLLLTHNIET
                     LGQMSCNPSIGGIGKGHLVRELDALGGAMALATDKSGIQFRRLNASKGAAVRATRAQA
                     DRILYKAAIREMLENQENLDLFQQAVEDVTLDGDRISGVITAMGVEFKARAVVLTAGT
                     FLSGKIHIGLENYEGGRAGDPAAKSLGGRLRELNLPQGRLKTGTPPRIDGRTIDFSQL
                     TEQPGDTPVPVMSVRGNAEMHPRQVSCWITHTNTQTHDIIRSGFDRSPMFTGKIEGVG
                     PRYCPSIEDKINRFADKDSHQIFLEPEGLTTHEYYPNGISTSLPFDIQIALVRSMKGL
                     ENAHILRPGYAIEYDYFDPRNLKASLETKTIAGLFFAGQINGTTGYEEAAAQGLLAGA
                     NAVQYVREQDPLLLRREQAYLGVLVDDLITKGVNEPYRMFTSRAEYRLQLREDNADMR
                     LTEDGYKIGLVGEAQWRMFNEKREAIEREIQRLKTTWYTPQKLAEDEQIRVFGQKLSR
                     EANLHDLLRRPNLDYAALMTLEGAMPSERLSAEVVEQVEIQVKYQGYIDRQNEEIDSR
                     RDIETLKLPEDIDYSKVKGLSAEVQQKLNQHKPETVGQASRISGVTPAAVALLMVHLK
                     RGFKDAK"
BASE COUNT          605 a          812 c         1004 g          915 t
ORIGIN      
        1 ttttgttaat ccactatatc gtcattcccg caaaaacaaa aaaatcaaaa acacaaaact
       61 gaaatatcgt cattcccgtg caggcgggaa tctaggtctg tcggtacgga aacttatcgg
      121 gaaaaacggt ttttccaacc ctgagactcc ggattcctgt tttcgcggga atccggtttt
      181 ttgagtttca gtcatttttg ataaattctt gcagctttga gtttctagat tcccgctttt
      241 gcgggaatga cgcggaaaag ttgctgtgat ttcggataaa ttttcgtcac gcttaatttc
      301 tgttttatcc gataaatgcc tgcaatctaa aatttcgtca ttcccgcaaa aacaaaaaat
      361 caaaacagaa gcctaaaatt tcgtcattcc cgcgaaggcg ggaatctagg tctgtcggta
      421 cggaaactta tcgggtaaaa cggttttgcc agccctgaga ctccggattc ctgttttcgt
      481 aggaatccgg ttttttgagc ttcagtcatt tttgataaat tcttgcagct ttgagtttct
      541 agattcccgc ttttgcggga atggcggttt ggaagttacc tgaaattcaa aaaaaacgga
      601 aaccggacgg attggattcc cgcctgcgcg ggaatgacgg attttaggtt tcttttttga
      661 ttttctgttt ttcgcgggaa tggcggtatg ggttctttct ctttgaagtt gcgatgctgg
      721 aaatgccgtc tgaagttcag acggcatttt tgtgccggtt taaaacagcg tctgctgcgc
      781 gagcaggttt ctgacggggg cgaagtcgcg gcgatgttcg ggcagcacgc cgtattgttt
      841 gagggcttcc agatgctgct tcgtgccgta acctttgtgt ttgtcgaaac cgtattgggg
      901 atggcgttgc gccagtgcgt acatttccgc atcgcgtgcg gtctttgcca aaacggatgc
      961 ggcggagatt tcgatgattt tgctgtcgcc tttgacgacg gcttcggcag ggatgttcaa
     1021 atgttcggga atgcggttgc cgtcgatgaa tattctttcg ggacgcacag ccaaaccgtc
     1081 aacggcgcgt ttcatcgcga gcatggtggc gtgcaggatg ttgaggctgg cgatttcttc
     1141 gggcgaggcg gcggcaacgt gccacgcaac cgcctgattt tttatcattt cggcaagcgc
     1201 gtcgcgtttt ttctcgctga gttttttgga gtcggtcagt ccgggcaggt cgaatatttc
     1261 cggaaggatg acggcggcgg caaacacgct gccgactaaa ggcccgcgcc ctgcctcgtc
     1321 cacgccggcg gtcagtatgt gcatgatgtt tcctgtcggg atggcgcgat gccgtctgaa
     1381 cggtgtttca gacggcatcg cgccgatgtg tttatttcgc gtctttaaac ccgcgcttca
     1441 aatgcaccat cagcaatgcc actgccgcag gggttacgcc ggaaatgcgg cttgcctgcc
     1501 cgacggtttc gggtttgtgc tggttgagct tttgctgcac ttctgccgac aaacctttaa
     1561 ctttgctgta atcgatatcc tcgggcagct ttaaggtttc gatgtcgcgg cggctgtcga
     1621 tttcttcgtt ttggcggtcg atatagcctt ggtatttgac ttggatttcg acttgttcga
     1681 ccacttcggc ggagaggcgt tcagacggca tcgcgccttc gagcgtcatc agcgcggcgt
     1741 agtcgaggtt cgggcggcgc aggaggtcgt gcaggttggc ttcgcggctg agcttttgcc
     1801 cgaatacgcg gatttgttcg tcttcggcga gtttttgcgg cgtgtaccac gttgttttca
     1861 aacgttggat ttcgcgttcg atggcttcgc gtttttcgtt gaacatgcgc cattgcgctt
     1921 cacccaccaa gccgattttg tagccgtctt cggtcaggcg catatcggcg ttgtcttccc
     1981 tgagttgcag gcggtattcg gcacggctgg tgaacattcg gtagggttcg ttcacgcctt
     2041 tggtgatgag gtcgtccacc aatacgccga gataggcttg ttcgcggcgc agcaggagcg
     2101 ggtcttgttc gcggacgtat tgcacggcgt tcgcgcctgc cagcagtcct tgcgcggcgg
     2161 cttcttcata acctgtcgta ccgttgattt gcccggcgaa aaacaatccg gcaatggttt
     2221 tggtttcgag gcttgctttg aggttgcgcg gatcgaagta gtcgtattcg atggcgtagc
     2281 cggggcgcag gatatgggcg ttttccaaac ctttcatact gcggacgagc gcgatttgga
     2341 tgtcgaacgg caggctggtg gagataccgt tggggtagta ttcgtgcgta gtcaggcctt
     2401 cgggttctag gaaaatctgg tggctgtctt tgtcggcgaa gcggttgatt ttgtcttcga
     2461 tagacggaca ataacgcggg cccacgcctt cgattttgcc ggtaaacatc gggctgcggt
     2521 cgaagcctga gcggatgatg tcgtgggttt gcgtgttggt atgcgtaatc cagcaggaca
     2581 cttggcgcgg gtgcatttcg gcgttgccgc gtacggacat gacgggaacg ggcgtgtcgc
     2641 cgggctgttc ggtcagttgg gagaagtcaa tcgtgcgtcc gtcgatgcgc ggcggcgtgc
     2701 cggttttcag acggccttgc ggcaggttca attcgcgcaa acgtccgccc agcgatttgg
     2761 cggcggggtc gccggcgcgt ccgccctcgt agttttccaa accgatgtgg attttgccgg
     2821 acaaaaacgt gcctgcggtc aacaccacgg cgcgtgcttt aaactccacg cccatcgcgg
     2881 tgattacgcc tgaaatgcgg tcgccatcga gcgttacgtc ttcgacggct tgttggaaaa
     2941 ggtcgaggtt ttcttggttt tccaacattt cgcggatggc ggctttatat aggatacgat
     3001 ccgcctgcgc gcgcgtggcc cgtactgccg cgcctttgct ggcgttcaga cggcggaact
     3061 ggatgccgga tttgtcggtt gccaacgcca tcgcgccgcc gagcgcgtcg agttcgcgca
     3121 ccaaatgccc tttgccgatg ccgccgatgg aagggttgca cgacatttgt ccgagcgttt
     3181 caatattgtg tgtgagcaaa agcgtctgcg cgcccatacg ggcggcggcg agcgcggctt
     3241 ctgtgccggc gtgtccgccg ccgacgacga taacgtcgta ggttttgggg taaatcatgt
     3301 gggtcatgtg tgtattgcct gacggtgttt cagacg
//
LOCUS       DBBZXU010000148         3294 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.148, whole genome shotgun sequence.
ACCESSION   DBBZXU010000148 DBBZXU010000000
VERSION     DBBZXU010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3294
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.148"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            101..1183
                     /locus_tag="ACJJDE_001970"
                     /pseudo
     CDS             101..1183
                     /locus_tag="ACJJDE_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743106.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
     gene            complement(1353..1562)
                     /locus_tag="ACJJDE_001971"
     CDS             complement(1353..1562)
                     /locus_tag="ACJJDE_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541835.1"
                     /translation="MNYFGMVEFLRLMAMVRPPFVFFSGTRSELPTYLDLVAELRLTG
                     WERFAGSQTLTVSSTSTAIQATTTT"
     gene            complement(1559..1855)
                     /locus_tag="ACJJDE_001972"
     CDS             complement(1559..1855)
                     /locus_tag="ACJJDE_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase UvrD"
                     /protein_id="HGG7541836.1"
                     /translation="MDAKHRLKKYVYHLLVAIDQLFNALTGGAADETLSSRTYRGARL
                     AQKPKTRWKVLYTLINGVFFDRQHCRQAYISELKGRQHDARFNQSRAAGEKGTR"
     gene            complement(1834..2439)
                     /locus_tag="ACJJDE_001973"
     CDS             complement(1834..2439)
                     /locus_tag="ACJJDE_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541837.1"
                     /translation="MTIYFKNGFYDDTLGSIPEGAVAVRAEEYAALLAGQAQGGQIAA
                     DSDGRPVLTPPRPSEYHEWDGKKWEIGEAAAAARFAEQKTATAFRLAAKADELKNSLL
                     AGYPQVEIDSFYRQEKEALARQADNNAPTPMLAQIAAARGVELDVLIEKVVEKSARLA
                     VAAGAIIGKRQQLEDKLNTIETAPGLDALEKEIEEWTLNIG"
     gene            2519..2806
                     /locus_tag="ACJJDE_001974"
     CDS             2519..2806
                     /locus_tag="ACJJDE_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HGG7541838.1"
                     /translation="MKIEFDSEKNQRNIEERNLPFESVGQIRWTTAVIVPDVCFDYPE
                     PRYVAAAYLGDTQRLHIVCFTPIKDGIRVISFRKANKREVKKYATSILNKR"
     gene            2778..3080
                     /locus_tag="ACJJDE_001975"
     CDS             2778..3080
                     /locus_tag="ACJJDE_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HGG7541839.1"
                     /translation="MQRQSLTNADGEVRELAAEDFALARPIVEALPEDLAQVLFSHQK
                     QLEEKGVMQKRNTGKTPKQLVTIRLSADVVEKFRAGGKGWQTRINEVLRQYVAQLK"
BASE COUNT          703 a          897 c          874 g          820 t
ORIGIN      
        1 cacgcaatgt accctgaccg gcaaaacttc cccaaacttc atcaaaaaat caactgtacc
       61 cgtctttttc agacggcatt gataccgtaa gaaatttccc atgcagaaat ggcaaaccga
      121 gctttattcc acaccgcttt ggctttgcct gacaccgaaa agcacggtca aagtcttgct
      181 gctgattacg gtaatggtta cgctgctgtt gaccgaagta cggctgaatg tgttgagtac
      241 ctttatgtcc aaaggacttt acgactcgat gcaggatttg aacgcctccg cgttttggat
      301 gtttgccgcg atgaacgcgg gcgtggtgct gatacgggcg tttaacaatg tcgtcaacga
      361 cttcctcgat caaggcttgg cgattaaatg gtcggagcag ctcaatgaag tgctgacgac
      421 gcgctggctt gccgacaaaa actactaccg cctgcaaatg cgccgccacg cgccggacaa
      481 catcgaccaa cgtatccaac aggacgcgca ggatttcatc gcttcgacca tcgaatttgt
      541 acgcggcatg gtcaattcgg tcgttacctc tttggaattt gccgttgttt tgtggggctt
      601 ggctggcatc ctgaccgtgt tcggcttcga cattccgcgc ggcattgttt ggctcgtctt
      661 tatttttgtg attttggcga cctttatcgc gatgtggata ggcaacccct tgattcgtta
      721 caactatgaa aacgaaaaac tcaacggcga ctaccgttat tccctcatcc gcgtacgcga
      781 ccacgccgaa agcgtagcgt tttacaacgg cgaacaacac gaacacggcc ggctttccga
      841 ccgctttaaa gccattatcc gcaaccgttg gcgcatcgcg cggcaaagcg tctgcttaag
      901 cggctttaac gatatgttca ccaacggcat caaactcttc cccattattt tgcaagcgcc
      961 gcgcctgttt gccggacaaa tcaaaatcgg cgacatccag cagaccgtcc aagcctttgc
     1021 gcgactgcaa aacgcgctat cttttttccg gatgttctac aacaaattca ccgcctaccg
     1081 cgcccgattg gagcgtctgt acggcttttt gctgagtacc gaagaacaac acagcgcgcg
     1141 gcaacccgag attagcgaag tttcagacgg cattgcactg gaatgtaagg cggcggcagc
     1201 ttttgcacga attggcggca gcttttgcac cgccgaagcg taggaaattg tattagcttt
     1261 tgcacaaatt tatccccgtt taatggtctg ttaaacgggg attatcttat gcctttaaaa
     1321 gtagtacgct acttgcggtc agaacttata aatcaggtgg tcgtcgtagc ttgaattgct
     1381 gttgatgtgc tgctcacagt caaggtttgg ctgcctgcaa aacgctccca tccggtcagg
     1441 cgcagttctg ccacgaggtc aagataagta ggcagttcgc tgcgggtgcc ggagaagaag
     1501 acaaatggcg gccgcaccat tgccatcagg cgcagaaact ctaccatgcc gaagtagttc
     1561 atcgcgtccc cttttccccg gcggcgcggc tttggttgaa ccgcgcgtcg tgctgcctgc
     1621 ctttcagttc gctgatatac gcctgccggc agtgttggcg gtcgaaaaat acgccgttga
     1681 tcagggtgta taaaaccttc cagcgggttt tgggcttttg ggcgagccgc gcgccgcgat
     1741 aggtgcggct tgagagggtt tcgtccgccg cgccgccggt tagggcgttg aacagttggt
     1801 cgatggctac caacaggtgg taaacgtatt ttttcagccg atgtttagcg tccattcttc
     1861 gatttccttt tccagcgcgt ccaatcctgg cgcggtttcg atggtgttca atttgtcttc
     1921 gagctgctgc cgctttccga taatcgcgcc ggcggcaacg gccaggcggg cggatttttc
     1981 gacaactttt tcaatcaaaa cgtccaattc cacgcccctt gcggcggcga tttgcgccag
     2041 catcggggtc ggggcgttgt tgtccgcctg ccgcgcgagg gcttcttttt cctgcctgta
     2101 aaagctgtcg atttccactt ggggatagcc cgccaagagg ctgtttttga gttcgtccgc
     2161 ctttgccgcg aggcggaatg ccgtggcggt tttttgttcg gcgaaacggg cggcggcagc
     2221 ggcttcgccg atttcccatt tcttgccgtc ccattcgtgg tattcggacg ggcgcggcgg
     2281 ggttaaaacg gggcggccgt cggaatctgc ggcaatctgc ccgccctgcg cctgtcctgc
     2341 caaaagggcg gcgtattctt cggcgcggac ggcaaccgcg ccttcgggga tgctgcccaa
     2401 ggtgtcgtcg taaaagccgt ttttgaaata gatggtcatt tcggggtttc cttttttgta
     2461 tttacatttt ggttttttgc cgcttataat gtaacgacaa aatacgctgc aagctgcaat
     2521 gaagattgaa tttgactccg aaaaaaatca acgcaatatc gaagagcgga atttgccctt
     2581 tgaatcagtc gggcaaatac gctggacaac ggccgttatt gtgcccgatg tctgctttga
     2641 ttaccccgaa ccgcgttatg ttgccgctgc ttatctaggc gatacgcaac gcctgcacat
     2701 tgtctgtttt acgccgataa aagacggcat ccgtgtcatc agttttcgca aagcgaataa
     2761 aagagaggtt aaaaaatatg caacgtcaat ccttaacaaa cgctgacggc gaagtgcggg
     2821 aacttgccgc cgaagatttt gcgcttgccc gccccattgt cgaagccctg cccgaagact
     2881 tggcacaggt gcttttttcc catcaaaaac aattggaaga aaagggcgta atgcaaaaac
     2941 gaaacacagg caaaaccccg aaacaactcg ttaccatacg cctgtccgcc gatgtggtcg
     3001 aaaaattccg cgccggcggc aagggctggc agacgcgcat caacgaggtt ttgcgccaat
     3061 atgtcgccca attgaaataa cgggggcggc cgctgcttat cgggcgcgcc cgactatcct
     3121 ttcccgcgcg gtttcggccg tgcggttttt tgttgccggt gccgtccgaa gggggcagcg
     3181 gctttttgcg cggtcattcc cgcctttcgt tattcccgcc actttccgtc attcccgcga
     3241 aggcgggaat cccgaaaccc ctgccgccgt cattcccgcg caggcgggaa tcca
//
LOCUS       DBBZXU010000149         3186 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.149, whole genome shotgun sequence.
ACCESSION   DBBZXU010000149 DBBZXU010000000
VERSION     DBBZXU010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3186)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3186)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3186
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.149"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            55..1008
                     /locus_tag="ACJJDE_001976"
     CDS             55..1008
                     /locus_tag="ACJJDE_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HGG7541840.1"
                     /translation="MTHTVHLHLEETDNLALQRLCGSFDNNLDLLAKALDIHISRRFE
                     HFTFNGAFAHAGKRALLKLLETAQTRDLNDGDIRLAAVEAQTEDAGHQEKNHDHAYYF
                     RTKRGSIGGRTPRQNGYIRALLNHDIVFGLGPAGTGKTYLAVAAAVDAMEKHQVERII
                     LVRPAVEAGEKLGFLPGDLTQKVDPYLRPLYDALYDLMGFDRVTKLIEKGLIEIAPLA
                     YMRGRTLNGAYIILDEAQNTTPEQMKMFLTRIGFGAKAVITGDTSQIDLPKNIKSGLK
                     DAREKLHNVEGLYFHTFTGEDVVRHPLVQKIVEAYESAEHD"
     gene            complement(1119..1442)
                     /locus_tag="ACJJDE_001977"
     CDS             complement(1119..1442)
                     /locus_tag="ACJJDE_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541841.1"
                     /translation="MKKCILGILTACAAMPAFADRIGDLEARLAQLEHRVAVLESGSN
                     TVKIDLFGSNSTMYVCSVTPFQKTFEASDRNEGVARQKVRQACNRETSAMFCEDEAIR
                     CRKFD"
     gene            complement(1615..2976)
                     /locus_tag="ACJJDE_001978"
     CDS             complement(1615..2976)
                     /locus_tag="ACJJDE_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HGG7541842.1"
                     /translation="MLKKWLNKMLPSGRSSKKAESKTIIPAERHNIRAEMLSFAAENV
                     IRRLKGAGFQAYVVGGAVRDLLLGIEPKDFDVATDATPEQVHKLFRRSRIIGRRFQIV
                     HVMNGAEIIEVTTFRGGAKVHQNAHGRIMKDNTYGSIEEDAMRRDFTCNALYYDPEKE
                     EILDFHNGIADVAARRLVMIGDAAERYQEDPVRILRAIRLSSKLGFDLSEETAAPIAE
                     SICRLKHEPVARLFDEIMKLLFSGHARECLKRLNGFDIPDDIHPLLNALRVSDGIAGK
                     MTVLALKNTDERLRADKSVSVGFVLAALMWPELERHWKSNLQQGLKPVPALSDAINTM
                     RETVERGWGVPQRFSATMREIWMFQPQFENRKGARPHKLFAQARFRAAYDFLLLRAET
                     GNADRALAEWWTAFQTASTEQRSEMTKNEAAARHEKNEGQAKKRRRRRRKPKPKVVGT
                     DWE"
BASE COUNT          749 a          933 c          768 g          736 t
ORIGIN      
        1 atctaatcca ctatagatta aaatcacaca atatccaact attcggacct tcatatgaca
       61 cataccgtcc acctgcattt agaagaaacc gacaacttgg cgttgcagcg tctgtgcggt
      121 tcttttgaca acaaccttga tttacttgct aaagcactcg atatccacat cagccgccgt
      181 tttgaacatt tcactttcaa cggcgcattt gcacacgccg gcaaacgcgc actgctcaaa
      241 ctcttggaaa cggcgcagac gcgcgaccta aacgacggcg acatcaggct tgccgccgtc
      301 gaagcccaaa ccgaagatgc cggtcatcaa gaaaaaaacc atgaccacgc ctattatttc
      361 cgcaccaagc gcggcagcat cggcggcaga acgccacggc agaacggcta tatccgcgcc
      421 ctactcaacc acgacatcgt attcggtctc gggccggcag gtacgggcaa aacctatctc
      481 gccgtcgccg ccgccgtcga tgcgatggaa aaacaccaag tcgaacgcat cattttagtg
      541 cggcctgccg tcgaagccgg cgagaaactg ggttttctgc ccggtgacct gacccagaaa
      601 gtcgatccct accttcgtcc gctttatgat gccctctatg acctgatggg ctttgaccgt
      661 gtaaccaagc tgattgaaaa aggcctgatt gaaatcgccc cgctcgccta tatgcgcggc
      721 aggacgctca acggcgcata catcatcctc gacgaagcgc aaaacaccac gcccgaacaa
      781 atgaaaatgt tcctgacccg catcggcttc ggcgcgaaag ccgtcattac cggcgacacc
      841 agccaaatcg acctgcccaa aaacatcaaa tcgggattaa aagatgcgcg tgagaaactg
      901 cacaacgtgg aagggctgta tttccacacc tttaccggcg aagacgttgt ccggcatcct
      961 ctggtgcaaa aaatcgtcga agcctacgaa tcggcagaac acgactgaca ttccaatgcc
     1021 gtctgaaacc cgatgcatgg aaaatcgggc agagaaaaac agatacggaa gccaagctcc
     1081 gtatccgtat ccgtttcttt atccgtccaa ccgatacatc aatcgaattt tctgcatcgg
     1141 attgcctcat cttcgcaaaa cattgccgaa gtttcgcggt tgcacgcctg acgcactttc
     1201 tgccgcgcca cgccttcatt ccgatcgctt gcctcaaacg tcttctgaaa aggcgtaacg
     1261 ctgcatacat acatggtgga atttgaaccg aaaaggtcga ttttgacggt attgctgccg
     1321 ctttccaata cggcgacacg gtgttccaac tgcgccagac gtgcttccaa atcgccgatt
     1381 ctgtcggcaa atgcaggcat ggcggcacac gcggtcaaaa tgcccaaaat acattttttc
     1441 atcaattttt ccttgtttct tgaaccctgc ccacccggac atcctttttc cgagaggcag
     1501 ggttagactt tatttacggg gatgaatccc cttacaaatc aggataatac atagaacggc
     1561 actttatgct tcatcccatg tgttgaaact tcattgctcc ttgtctgttg acccttattc
     1621 ccaatccgtt cccacaacct tcggcttggg tttgcgcctg cgacggcggc gttttttcgc
     1681 ctgtccttcg tttttttcgt gtcgggcggc ggcttcgttt ttggtcatct ccgaccgctg
     1741 ttccgtcgat gccgtctgaa acgccgtcca ccactcggca agggcgcggt ccgcattgcc
     1801 ggtttcggcg cgcaagagca ggaaatcata ggcggcacgg aaacgcgcct gtgcaaacag
     1861 tttgtgcgga cgtgcgcctt tgcgattttc aaactgcggc tggaacatcc aaatttcgcg
     1921 catcgtggcg gaaaagcgtt gcggcacgcc ccaaccgcgt tcgacggttt cgcgcatcgt
     1981 attgattgca tcggacaggg cgggcacggg tttcaaaccc tgttgcagat tgcttttcca
     2041 atggcgttcc aactcgggcc acatcagggc cgccagtacg aaaccgaccg aaaccgattt
     2101 gtcggcacgc agccgctcat cggtattttt cagggcaagc accgtcattt ttccggcgat
     2161 gccgtctgaa acgcgcaagg cattgagcag cggatggatg tcgtccggta tgtcaaatcc
     2221 gttcaaacgt ttcagacact cgcgcgcgtg ccctgaaaac agcagtttca taatttcgtc
     2281 gaacagccgc gctaccggtt cgtgcttcag acggcatatc gattcggcaa tcggtgcggc
     2341 ggtttcttcc gacagatcaa agcccaattt gctcgacagg cggatggcgc gcaaaatcct
     2401 gacagggtct tcctgatagc gttcggcggc atcaccaatc ataaccagcc tgcgggcggc
     2461 aacatcggca atcccgttgt ggaaatccaa aatctcttct ttttcaggat cgtaatacaa
     2521 ggcattgcag gtaaaatcgc gccgcatcgc atcttcttcg atgctgccgt aggtgttgtc
     2581 cttcatgatt ctgccgtgcg cgttctgatg aaccttcgca ccgccgcgaa acgtcgttac
     2641 ttcgataatc tccgcaccgt tcatcacatg gacaatctga aaacgcctgc cgatgatgcg
     2701 gctgcggcgg aagagtttgt gcacctgttc gggcgtggca tcggttgcga catcgaaatc
     2761 cttgggttcg atgccgagca gcaggtccct gaccgcgccg ccgaccacat aagcctgaaa
     2821 ccccgcccct ttcaggcggc gtatgacgtt ttcggcggca aagctcaaca tttcggcacg
     2881 gatgttgtgt ctttcggcag gaatgattgt tttactttcc gcttttttac tgctccgacc
     2941 ggaaggcagc atcttattca accatttttt cagcataaat attctaaccc gaagagcggc
     3001 atctccacgg gcaaccgtgt tcagacggca tcaggcggta cgattccgca agatgccgta
     3061 accataaaca aaaggcgtag aaactacgcc gtccgaatca cgccgccctc gcggcggcgg
     3121 caacgcgcca ttataacaga ttgcccttta aaaaaatcag accctgcttt tgtggcggac
     3181 ttggat
//
LOCUS       DBBZXU010000150         3122 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.150, whole genome shotgun sequence.
ACCESSION   DBBZXU010000150 DBBZXU010000000
VERSION     DBBZXU010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3122
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.150"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(333..1322)
                     /gene="pdxA"
                     /locus_tag="ACJJDE_001979"
     CDS             complement(333..1322)
                     /gene="pdxA"
                     /locus_tag="ACJJDE_001979"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019742700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HGG7541843.1"
                     /translation="MKQPVFAVTSGEPAGIGPDICLDLAFARLPCRCAVLGDKNLLRA
                     RAEALGKSVVLRDFDPESGGAAYGELEVLHIPAVEAVEAGKLNPANAAYVLQLLDTAL
                     AGISDGIFDGIVTAPLHKGIINDARASTGFFSGHTEYLAEKSGTGQVVMMLAGKGLRV
                     ALVTTHLPLKDVAAAITQPLIESVARILHHDLKHKFGIKNPKILVAGLNPHAGEGGHL
                     GHEETDTIIPALENLRREGINLAGPYPADTLFQPFMLEGADAVLAMYHDQGLPVLKYH
                     SFGQGVNITLGLPFIRTSVDHGTALDLAATGRADSGSLITAVETAVEMARGSL"
     gene            1482..2909
                     /locus_tag="ACJJDE_001980"
     CDS             1482..2909
                     /locus_tag="ACJJDE_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005283 - amino acid:sodium symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015293 - symporter activity [Evidence
                     IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine/glycine:cation symporter family protein"
                     /protein_id="HGG7541844.1"
                     /translation="MNENFTEWLHGWVGAINDPMWSYLVYMLLGTGLFFTVTTGFVQF
                     RLFGRSIKEMLGGRKQGDDPHGITPFQAFVTGLASRVGVGNIAGVAIAIKVGGPGAVF
                     WMWVTALIGMSSAFVESSLAQLFKVRDYDNHHFRGGPAYYITQGLGQKWLGVLFALSL
                     IFCFGFVFEAVQTNTIADTVKAAWGWEPHYVGVALVILTAPIIFGGIRRISKAAEIVV
                     PLMAVLYLFIALFIILTNIPMIPDVFGQIFSGAFKFDAAAGGLLGGLISQTMMMGIKR
                     GLYSNEAGMGSAPNAAAAAEVKHPVSQGMIQMLGVFVDTIIVCSCTAFIILIYQQPYG
                     DLSGAALTQAAIVSQVGQWGAGFLAVILFMFAFSTVIGNYAYAESNVQFIKSHWLITA
                     VFRMLVLAWVYFGAVANVPLVWDMADMAMGIMAWINLVAILLLSPLAFMLLRDYTAKL
                     KMGKDPEFKLSEHPGLKRRIKSDVW"
BASE COUNT          640 a          851 c          877 g          754 t
ORIGIN      
        1 cctttcgtca ttcccgtgaa aacgggaatc tagaacctct aaactttcag ataatctttg
       61 aatattgccg tcgcccaaag gcctggattc ccgcctgcgc gggaatgacg gtttagaagt
      121 tgcccgaaac ctcaaaaaaa aaccgaaacc gaacaagccg gattcccgca acattccgtc
      181 attcccgtga aaacgggaat ctagaacctc aaactttcag ataatctttg aatattgccg
      241 ccgcccgaag gtctggattc ccgcctgcgc gggaatgacg gcggagggtg gacgatgccg
      301 cctgcgcgga aatgacgggt cttttatcat ctttaaaggc tgccgcgcgc catctcgacg
      361 gcggtctcca cggcagttat caggctgccg gaatccgccc tgccggttgc cgccaaatcg
      421 agcgcggtgc cgtgatcgac agaggtgcgg ataaagggca gacccagcgt gatgttcacg
      481 ccctgcccga aactgtggta tttcaacacg ggcagccctt ggtcgtggta catcgccaat
      541 acggcatccg caccttcgag cataaacggc tggaacaatg tgtccgccgg atacgggccg
      601 gcaaggttta tcccttcgcg gcgcaggttt tccaatgcag ggataatggt gtcggtttct
      661 tcgtgtccga ggtgtccgcc ttcgccggcg tggggattaa gtccggcgac aaggattttg
      721 ggatttttga tgccgaattt gtgttttaag tcgtgatgca aaatgcgtgc gacgctttca
      781 atcagcggtt gcgtgatggc ggcggcaacg tctttcagcg gcaggtgggt cgttacgagg
      841 gcgacgcgca ggcctttgcc ggcaagcatc atcacgacct gccccgtgcc gcttttttcc
      901 gccagatatt cggtgtgtcc gctgaaaaaa cctgtgcttg cgcgcgcgtc gttgatgatg
      961 cctttgtgca gcggcgcggt aacgatgccg tcgaaaatgc cgtctgaaat gcctgcgagc
     1021 gcggtgtcca aaagttgcag cacataggcg gcgttggcgg gattgagttt gcccgcctca
     1081 accgcttcga cggcagggat gtgcagcact tccagctcgc cgtatgccgc gccgcctgat
     1141 tctggatcga agtcgcgcag gacgacgctt ttgcccaagg cttcggcgcg cgcgcgcaat
     1201 aggtttttgt cgcccaatac cgcgcagcgg cagggcaggc gtgcaaacgc caagtccaaa
     1261 caaatatcgg ggccgatgcc ggcaggctcg ccggaagtaa cggcaaaaac aggctgtttc
     1321 atcgtgtttg ctccaaacaa aatgcgattc taacgccgca gccgcgcggc gatgtaaatt
     1381 tttctgattt tgttgacaat ctgctagaat gggcgtttac aaaatttaaa ccctgcttgc
     1441 ataccgccaa tatgtgcgag tttcaacttt aaggaagcga tatgaacgag aactttaccg
     1501 aatggctgca cggctgggtc ggcgccatca acgatccgat gtggtcatac ttggtttata
     1561 tgcttttggg tacggggctt ttcttcaccg taaccacggg ctttgtccaa ttccgcctgt
     1621 tcgggcgcag catcaaagaa atgctcggcg gccgcaaaca gggggacgac cctcacggca
     1681 tcacgccgtt tcaggcattt gtaaccggcc ttgccagccg cgtgggcgtg ggcaatatcg
     1741 cgggcgtggc catcgccatc aaagtcggcg gaccgggcgc ggtgttttgg atgtgggtaa
     1801 ccgccttaat cggtatgagt tcggcgtttg tcgaatcttc gctggcgcag ctctttaaag
     1861 tccgcgacta cgacaaccac catttccggg gcggccctgc ctactacatc actcaagggc
     1921 tggggcagaa atggctgggc gtgttgttcg ccctgagcct gattttctgt ttcggctttg
     1981 tgtttgaagc ggttcagacc aataccattg ccgataccgt caaagcggcg tggggttggg
     2041 agcctcatta tgtcggcgtc gccctggtga ttttaaccgc gccgattatc ttcggcggca
     2101 tcaggcgcat atctaaagcg gcggaaatcg tcgtccccct gatggcggtt ttgtacctct
     2161 ttatcgcgct tttcatcatt ttgaccaata ttccgatgat tccggacgtg ttcggtcaga
     2221 ttttttcggg cgcgttcaaa ttcgacgcgg cagcaggcgg cttactcggc ggtctgattt
     2281 cgcaaacgat gatgatgggc atcaaacgcg gcctgtattc caacgaggcg ggtatgggtt
     2341 ccgcgccgaa cgccgccgcc gccgccgaag tgaaacaccc tgtttcgcaa ggtatgattc
     2401 aaatgctggg cgtgtttgtc gataccatca tcgtttgttc ttgcaccgcc ttcatcatct
     2461 tgatttacca acagccttac ggcgatttga gcggtgcggc gctgacgcag gcggcgattg
     2521 tcagccaagt ggggcaatgg ggcgcgggct tcctcgccgt catcctgttt atgtttgcct
     2581 tttccaccgt tatcggcaac tatgcctatg ccgagtccaa cgtccaattc atcaaaagcc
     2641 attggctgat taccgccgtt ttccgtatgc tggttttggc gtgggtctat ttcggcgcgg
     2701 ttgccaatgt gcctttggtc tgggatatgg cggatatggc gatgggcatt atggcgtgga
     2761 tcaaccttgt cgccatcctg ctgctctcgc cactggcgtt tatgctgctg cgcgattaca
     2821 ccgccaagct gaaaatgggc aaagaccccg agttcaaact ttccgaacat ccgggcctga
     2881 aacgccgtat caaatccgac gtttggtaaa tcccgccctt accggagccg cttccccgcg
     2941 aagcggcttt tccctttccg cacactgtaa aaacagggcg aacaagcgta caatcccaac
     3001 cctttacttt tgaatccatt tcgtttttca gacggcatat tgaatatagt ggtttaacaa
     3061 aaatcgggac aaggcggcga agccgcagac agtacagata gtacagaacc gattcacttg
     3121 gt
//
LOCUS       DBBZXU010000151         3099 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.151, whole genome shotgun sequence.
ACCESSION   DBBZXU010000151 DBBZXU010000000
VERSION     DBBZXU010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.151"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            113..2878
                     /gene="tdfH"
                     /locus_tag="ACJJDE_001981"
     CDS             113..2878
                     /gene="tdfH"
                     /locus_tag="ACJJDE_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent zinc piracy receptor TdfH"
                     /protein_id="HGG7541845.1"
                     /translation="MRSSFRLKPICFYLMGVMLYHHSYAEDAGRAGSEAQIQVLEDVH
                     VKAKRVPKDKKVFTDARAVSTRQDIFKSSENLDNIVRSIPGAFTQQDKSSGIVSLNIR
                     GDSGFGRVNTMVDGITQTFYSTSTDAGRAGGSSQFGASVDSNFIAGLDVVKGSFSGSA
                     GINSLAGSANLRTLGVDDVVQGNNTYGLLLKGLTGTNSTKGNAMAAIGARKWLESGAS
                     VGVLYGHSRRSVAQNYRVGGGGQHIGNFGAEYLERRKQRYFVQDGQLKFNSDSGKWER
                     DLQRQQWKYPWYKKYENPQELQKYIEEHDKSWRENLAPQYDITPIDPSSLKQQSAGNL
                     FKLEYDGVFNKYTAQFRDLNTKIGSRKIINRNYQFNYGLSLNSYANLNLTAAYNSGRQ
                     KYPKGSKFTGWGLLKDFETYNNAKILDLNNTATFRLPRETELQTTLGFNYFHNEYGKN
                     RFPEELGLFFDGPDQDNGLYSYLGRFKGDKGLLPQKSTIVQPAGSQYFNTFYFDAALK
                     KDIYRLNYSTNTVGYRFGGEYTGYYGSDDEFKRAFGENSPTYREHCNQSCGIYEPVLK
                     KYGKKRANNHSVSISADFGDYFMPFASYSRTHRMPNIQEMYFSQIGDSGVHTALKPER
                     ANTWQFGFNTYKKGLLKQDDTLGLKLVGYRSRIDNYIHNVYGKWWDLNGNIPSWVSST
                     GLAYTIQHRNFKDKVHKHGFELELNYDYGRFFTNLSYAYQKSTQPTNFSDASESPNNA
                     SKEDQLKQGYGLSRVSALPRDYGRLEVGTRWLGNKLTLGGAMRYFGKSIRATAEERYI
                     DGTNGGNTSNVRQLGKRSIKQTETLARQPLIFDFYAAYEPKKNLIFRAEVKNLFDRRY
                     IDPLDAGNDAATQRYYSSFDPKDKDEDVTCNADGLCNGKYGGTSKSVLTNFARGRTFL
                     ITMSYKF"
BASE COUNT          882 a          771 c          742 g          704 t
ORIGIN      
        1 ccaattgaaa tcttcagacg gtatatcgaa tttacacttt ttaatgttta tgccgcctaa
       61 aaaaatgcta atatatttct taattgtctg actgtttatt gttgaggaaa atatgagatc
      121 ttctttccgg ttgaagccga tttgttttta tcttatgggt gttatgctat atcatcatag
      181 ttatgccgaa gatgcagggc gcgcgggcag cgaggcgcag atacaggttt tggaagatgt
      241 gcacgtcaag gcgaagcgcg taccgaaaga caaaaaagtg tttaccgatg cgcgtgccgt
      301 atcgacccgt caggatatat tcaaatccag cgaaaacctc gacaacatcg tacgcagcat
      361 acccggtgcg tttacacagc aagataaaag ctcgggcatt gtgtctttga atattcgcgg
      421 cgacagcggg ttcgggcggg tcaatacgat ggtggacggc atcacgcaga ccttttattc
      481 gacttctacc gatgcgggca gggcaggcgg ttcatctcaa ttcggtgcat ctgtcgacag
      541 caattttatt gccggactgg atgtcgtcaa aggcagcttc agcggctcgg caggcatcaa
      601 cagccttgcc ggttcggcga atctgcggac tttaggcgtg gatgacgtcg ttcagggcaa
      661 taatacctac ggcctgctgc taaaaggtct gaccggcacc aattcaacca aaggtaatgc
      721 gatggcggcg ataggtgcgc gcaaatggct ggaaagcgga gcatctgtcg gtgtgcttta
      781 cgggcacagc aggcgcagcg tggcgcaaaa ttaccgcgtg ggcggcggcg ggcagcacat
      841 cggaaatttt ggcgcggaat atctggaacg gcgcaagcaa cgatattttg tacaagacgg
      901 ccagttgaaa ttcaattccg acagcggaaa atgggagcgg gacttgcaaa gacaacagtg
      961 gaaatacccg tggtataaaa aatacgaaaa cccccaagaa ctgcaaaaat acatcgaaga
     1021 gcatgacaaa agctggcggg aaaacctggc gccgcaatac gacatcaccc ccatcgatcc
     1081 gtccagcctg aagcagcagt cggcaggtaa tctgtttaaa ttggaatacg acggcgtatt
     1141 caataaatac acggcgcaat ttcgcgattt aaacaccaaa atcggcagcc gcaaaatcat
     1201 caaccgcaat tatcaattca attacggttt atctttaaac tcatatgcca acctcaatct
     1261 gaccgcagcc tacaattcgg gcaggcagaa atatccgaaa gggtcgaagt ttacaggctg
     1321 ggggctttta aaagattttg aaacctacaa caacgcgaaa atcctcgacc tcaacaacac
     1381 cgccaccttc cggctgcccc gcgaaaccga gttgcaaacc actttgggct tcaattattt
     1441 ccacaacgaa tacggcaaaa accgctttcc tgaagaattg gggctgtttt tcgacggtcc
     1501 ggatcaggac aacgggcttt attcctattt ggggcggttt aagggcgata aagggctgct
     1561 gccccaaaaa tcaaccatcg tccaaccggc cggcagccaa tatttcaaca cgttctactt
     1621 cgatgccgcg ctcaaaaaag acatttaccg cttaaactac agcaccaata ccgtcggcta
     1681 ccgtttcggc ggcgaatata cgggctatta cggctcggat gacgaattta agcgggcatt
     1741 cggagaaaac tcgccgacat acagggaaca ttgcaaccag agctgcggaa tttatgaacc
     1801 cgtattgaaa aaatacggca aaaagcgcgc caacaaccat tcggtcagca ttagtgcgga
     1861 cttcggcgat tatttcatgc cgttcgccag ctattcgcgc acacaccgta tgcccaacat
     1921 ccaagaaatg tatttttccc aaatcggcga ctccggcgtt cacaccgcct taaaaccaga
     1981 gcgcgcaaac acttggcaat ttggcttcaa tacctataaa aaaggattgt taaaacaaga
     2041 tgatacatta ggattaaaac tggtcggcta ccgcagccgc atcgacaact acatccacaa
     2101 cgtttacggg aaatggtggg atttgaacgg gaatattccg agctgggtca gcagcaccgg
     2161 gcttgcctac accatccaac accgcaattt caaagacaaa gtacacaaac acggttttga
     2221 gttggagctg aattacgatt atgggcgttt tttcaccaac ctttcttacg cctatcaaaa
     2281 aagcacgcaa ccgaccaact tcagcgatgc gagcgaatcg cccaacaatg cgtccaaaga
     2341 agaccaactc aaacaaggtt atgggttgag cagggtttcc gccctgccgc gagattacgg
     2401 acgtttggaa gtcggtacgc gctggttggg caacaaactg actttgggcg gcgcgatgcg
     2461 ctatttcggc aagagcatcc gcgcgacggc tgaagaacgc tatatcgacg gcaccaacgg
     2521 gggaaatacc agcaatgtcc ggcaactggg caagcgttcc atcaaacaaa ccgaaaccct
     2581 tgcccgccag cctttgattt ttgattttta cgccgcttac gagccgaaga aaaaccttat
     2641 tttccgcgcc gaagtcaaaa atctgttcga caggcgttat atcgatccgc tcgatgcggg
     2701 caatgatgcg gcaacgcagc gttattacag ctcgttcgac ccgaaagaca aggacgaaga
     2761 cgtaacgtgt aatgctgatg gcttgtgcaa cggcaaatac ggcggcacaa gcaaaagcgt
     2821 attgaccaat tttgcacgcg gacgcacctt tttgataacg atgagctaca agttttaaag
     2881 gcagcccgcg ttttgtggaa aaccgcaatg ccgtctgaaa gcccttcaga cggcatttgt
     2941 ttccccaaac gcatcatcct gccgcaagcc tatgccaatc cgagaccttt gcaataacat
     3001 aggttactaa aattttatgc tcaatctcat tttcaaaatg caaaactttt ctgatttttc
     3061 ctactttttg ctcaatatta ggaaggtttt aggcaattg
//
LOCUS       DBBZXU010000152         3031 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.152, whole genome shotgun sequence.
ACCESSION   DBBZXU010000152 DBBZXU010000000
VERSION     DBBZXU010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 3031)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3031)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3031
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.152"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1599
                     /locus_tag="ACJJDE_001982"
     CDS             <1..1599
                     /locus_tag="ACJJDE_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002223481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7541846.1"
                     /translation="LAENQSRYDTWKEGGIGRSILHGAAGGLTTGSLGGILAGGGTSL
                     AAPYLDKAAENLGTAGKAAVNALGGAAIGYAAGGNVGTAAVGANVDWNNRQLHNSEIR
                     KIKNNAAKFAKLHPGISQRQAEERLVAQAMRQVDAAYYAKHADTDTAAEQFLRSIAGS
                     FKADGETFLDFAPMKYYRDSGKFAEHTGYRDLRAKLGQNPVHTEAQRNRTIEEKTYGT
                     IGRGVGKGIGNTLANNLQAGPPHYVLGITNYSNWGKELIPYENPVERAIGKQAEDMTE
                     KAVAAVSLGRSLPSKVVNVPSKLAKSIKTAETHKPLVQKRTETYFRVEGGGSGNNQAA
                     KAAKNTEKMKAAIDQTHSGVDLPYDSRQIRAKLEKRYGAENIVSTTIPKKPVQSINNQ
                     TKPDYSSIVYTNKSGKVVNVKYKDPISGESKAVNIAYDNRGLPIFDNVSNFTTKIDNS
                     LSYTGQMRAATKDLWKAIESGQVPKNQFTNEQLTKIKAGNEKIPGYTWHHNAQSSPNN
                     MQLIPNSIHTAVRHTGQKSLKKGQ"
     gene            1602..2078
                     /locus_tag="ACJJDE_001983"
     CDS             1602..2078
                     /locus_tag="ACJJDE_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003748018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0042546 - cell wall biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HGG7541847.1"
                     /translation="MRKLSISSDEGLVPIRTIQQFAEDVGVVFPASYVSLLSKHDHLY
                     PKENIFNFVNQYGENDERDISFLGYKQDLGYEDIYSYSCIDDEYGYAKKVIAFGISAN
                     GDYICFDYRKCNENPCIILMYHDDFYEDENGDTKMVTSHIADSFDAFLDMLYELSD"
     gene            2192..>3031
                     /locus_tag="ACJJDE_001984"
     CDS             2192..>3031
                     /locus_tag="ACJJDE_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin repeat-containing protein"
                     /protein_id="HGG7541848.1"
                     /translation="MRFSRFEPKGRLKQQIRFQTTFLSTSHHGNQTKAAHRHIHVGST
                     AGTTTIRSGGDTTLKGAQLIGKGIQADTRNLHIESVQDTETYQSKQQNASAQVTVGYG
                     FSASGDYSQSKIRADHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSSQSAEDKGK
                     NRFQTATLTASDIQNHSQYKGESFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNG
                     ASSSVGYGSDSDSQSSITKSGINTRNIHITDEAGQLARTGRTAKETEARIYTGIDTET
                     ADQH"
BASE COUNT         1022 a          661 c          725 g          623 t
ORIGIN      
        1 cttgccgaaa accaaagccg ctacgacacc tggaaagaag gcggcatagg caggagcata
       61 ctgcacgggg cggcaggcgg actgacgacc ggaagcctcg gcggcatact ggccggcggc
      121 ggcacttccc ttgccgcacc gtatttggac aaagcggcgg aaaacctcgg tacggcgggc
      181 aaagcggcgg tcaacgcact gggcggggcg gcaatcggct atgcggcggg cgggaatgtc
      241 ggcacggcgg cagtaggggc gaatgtcgat tggaacaata ggcagctgca caacagcgag
      301 atcagaaaaa ttaaaaataa tgccgctaaa tttgccaaac tccatcccgg catttcccaa
      361 cggcaggcag aagagcggct ggtggcacaa gctatgcgtc aggtcgatgc ggcttattat
      421 gccaaacatg ccgacaccga cacggcggcg gaacaattcc tgcgcagcat agcgggaagt
      481 ttcaaagccg acggggaaac gttcctggat tttgccccga tgaagtatta cagggacagc
      541 ggtaaatttg ccgaacatac aggctatcga gatctaagag caaagttggg acagaatccg
      601 gtccataccg aagcgcaaag gaacagaact attgaagaaa agacctacgg cacaataggc
      661 agaggtgtag gtaaaggcat cggcaatacc ctagccaaca acctgcaggc gggtccgcca
      721 cactatgtac tcggcattac gaactattcg aactggggca aagaacttat tccatacgag
      781 aaccctgttg agcgcgccat cggcaaacag gcagaggata tgacggaaaa agcggtagca
      841 gctgtgtctt tgggccggag tttgccgtca aaggttgtta atgtaccctc taaattagct
      901 aaaagcatta agacagcgga aacacataaa ccactggtac aaaagcgtac ggaaacttat
      961 tttagagttg aaggaggagg aagtggaaat aatcaggcag ccaaagccgc taaaaatacg
     1021 gaaaaaatga aagccgcaat agatcaaacc cacagtggag ttgacctgcc ttatgattcg
     1081 agacaaattc gagctaaact ggaaaaaaga tatggagctg agaatattgt atccactacg
     1141 attccaaaga aaccggtcca aagtatcaat aatcaaacta aaccggacta ctcatctatt
     1201 gtatatacta ataaaagtgg aaaggtagtt aatgttaaat ataaagatcc tatatcaggg
     1261 gaaagtaagg ctgttaatat cgcctatgat aataggggat tacctatatt tgataacgta
     1321 tcaaatttta ccaccaaaat agataattca ttgtcgtata cgggacagat gagggcagct
     1381 actaaagatt tatggaaagc tattgaaagt ggacaagtgc ccaaaaatca atttactaat
     1441 gaacaactaa cgaagattaa agcaggaaat gaaaaaattc ctggttatac atggcatcat
     1501 aatgcgcaaa gctctcctaa taatatgcag ttaattccta atagtattca tacagctgtt
     1561 aggcatactg gtcaaaaatc gttaaagaaa ggtcagtaaa aatgagaaaa ctatcaatat
     1621 catcagatga gggattggtt ccaataagaa caattcaaca atttgctgaa gatgtagggg
     1681 tcgtttttcc cgcgtcatat gtatcacttc ttagtaaaca tgatcattta taccctaaag
     1741 aaaatatttt caattttgtc aatcaatacg gtgaaaatga tgaaagggac atttcatttt
     1801 tagggtataa gcaagattta ggctatgaag atatttatag ctattcatgt attgatgatg
     1861 aatatgggta tgcaaaaaaa gtgattgctt ttgggatttc agccaatggc gattatatct
     1921 gttttgatta cagaaaatgc aatgaaaatc catgtatcat tctgatgtat catgatgatt
     1981 tctatgaaga tgagaatggg gatacgaaaa tggtaactag ccatattgca gatagttttg
     2041 atgccttttt ggatatgcta tatgaacttt cagattaagt gtgtaggttg agttgaaaac
     2101 ccaactaaat taaaaaggtc gtctgaaatc agcaagccgt agcccatatg aaacctaaac
     2161 tcaacaagta ggatgtgtgc ggaacgcacg catgcggttc tcaaggtttg agcccaaagg
     2221 tcgtctgaaa caacaaatac ggtttcagac gacctttctt tcaacaagcc accacggcaa
     2281 tcagacaaaa gcagcacatc gccacatcca tgtcggcagt acggccggca caaccaccat
     2341 ccgcagcggc ggggatacca ccctcaaagg tgcgcagctc atcggcaaag gcatacaggc
     2401 agatacgcgc aacctgcata tagaaagtgt tcaagatact gaaacctatc aaagcaaaca
     2461 acaaaacgcc agtgcacaag tgaccgtagg ttatggcttc agtgccagtg gcgattacag
     2521 ccaaagcaaa atccgagccg accatgcttc ggtaaccgag caaagcggta tttatgccgg
     2581 agaagacggc tatcaaatca aggtcggaaa ccatacagac ctcaaaggcg gcatcatcac
     2641 cagcagccaa agcgcagaag acaagggtaa aaaccgcttt cagacggcca cccttactgc
     2701 cagcgacatt caaaaccaca gccaatacaa aggcgaaagt tttggattgg gcgcaagtgc
     2761 gtccataagc ggcaaaacac tgggacaggg cgcacaaaat aagcctcaaa acaaacacct
     2821 gacaagcgtg gccgataaaa acggcgcaag ttcatcagtg ggttatggca gcgacagcga
     2881 cagtcaaagc agcatcacga aaagcggcat caacacccgc aacatacaca tcaccgacga
     2941 agcgggacaa cttgcccgaa caggcaggac tgccaaagaa accgaagcgc gtatctacac
     3001 cggcatcgac accgaaactg cggatcaaca c
//
LOCUS       DBBZXU010000153         2883 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.153, whole genome shotgun sequence.
ACCESSION   DBBZXU010000153 DBBZXU010000000
VERSION     DBBZXU010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.153"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(97..573)
                     /gene="greA"
                     /locus_tag="ACJJDE_001985"
     CDS             complement(97..573)
                     /gene="greA"
                     /locus_tag="ACJJDE_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003688476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HGG7541849.1"
                     /translation="MQKIPLTVRGAELLKQELQQLKSVARPEVIEAIAEARSHGDLSE
                     NAEYEAAKERQGFIEGRISELEHKLSVAHIINPTEIHAEGKIVFGTTVTLEDLETEEH
                     VTYQIVGEDEADIKQGKIYVGSPIARALIGKEEGDTAEVQAPGGVREYDIIEVRYI"
     gene            968..2269
                     /gene="aroA"
                     /locus_tag="ACJJDE_001986"
     CDS             968..2269
                     /gene="aroA"
                     /locus_tag="ACJJDE_001986"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HGG7541850.1"
                     /translation="MTESVRLPVARLKPSTVALPGSKSISNRTLLLAALSDNACEIHS
                     LLKSDDTDRMLEALDKLGVQIEYLAEDRLKVHGTGGRFPNRTADLFLGNAGTAFRPLT
                     AALAVLGGDYHLHGVPRMHERPIGDLADALRIAGADVEYLGKEHYPPLHIGKRQDNGE
                     RVIPIKGNVSSQFLTALLMALPLTGQAFEIRMVGELISKPYIDITLKLMAQFGVQVAN
                     ENYRVFKIPADAHYHAPEHLHVEGDASSASYFLAAGLIAATPVRVTGIGANSIQGDVA
                     FARELEKIGADVVWGENFVEVSRPKERAVQSFDLDANHIPDAAMTLAIVALATGQTCT
                     LRNIGSWRVKETDRIAAMANELRKLGAKVVEEAEAIHITPPKTLTPDAVIDTYDDHRM
                     AMCFSLVSLLGVPVVINDPKCTHKTFPTYFDVFSSLTETTE"
     gene            complement(2312..2845)
                     /locus_tag="ACJJDE_001987"
     CDS             complement(2312..2845)
                     /locus_tag="ACJJDE_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HGG7541851.1"
                     /translation="MFPPDKTLFLCLSALLLASCGTTSGKHRQPKPKQTVRQIQAVRI
                     SHIDRTQGSQELMLHSLGLIGTPYKWGGSSTATGFDCSGMIQFVYKNALNVKLPRTAR
                     DMAAASRKIPDSRLKAGDLVFFNTGGTHRYSHVGLYIGNGEFIHAPSSGKTIKTEKLS
                     TPFYAKNYLGAHTFFTE"
BASE COUNT          606 a          791 c          775 g          711 t
ORIGIN      
        1 ctatttgtac tgtctgcggc ttcgtcgcct tgtcctgatt tttgttaatc cactataatt
       61 tcctgcgtgt gtcgggtgta tcgaaatcaa gccgaatcaa atatatcgga cttcgataat
      121 gtcgtattcg cgcacgccgc ccggggcttg gacttccgcc gtatccccct cttccttgcc
      181 gattaaggcg cgggcgatgg gtgagccgac atagattttg ccctgtttga tgtcggcttc
      241 gtcttcgccg acaatttggt aggtaacgtg ttcttccgtt tccaaatctt ccagcgtaac
      301 cgtcgtaccg aacacgattt tgccttcggc gtggatttcg gtcggattga tgatgtgggc
      361 aacggaaagt ttgtgttcca actcggaaat gcggccctcg ataaaacctt ggcgttcttt
      421 ggcggcttca tattcggcgt tttcggacaa atcgccgtgc gatctggctt cagcaatcgc
      481 ttcgatcact tcggggcgcg ccacgctttt aagctgctgc aattcctgtt tcagcaattc
      541 cgcaccgcgt acggtcaggg ggattttttg catcggtctt ttttctccat attccggcac
      601 accggtttgc ggcagcaaac ataccgcata ccgtcttgtt ttgtgcgtcc ggatattaaa
      661 ataaaaacac aagccgcccg gaaaatcggc ggcttgtctg tcgttgaaca gcagctattc
      721 taccaaattc tatgaaattg gcaatcgtgc cgtgccgtcc gcaaacacgc tatgtccgca
      781 acaaaagccg aaaatatgcc ggcaaaaaaa ttttagaaac aaaaaattta aaaataatca
      841 attttcggca taaaaaacca catttacgga ctttaaaacc gaaaatgcca aacctgagat
      901 ttttcataca gcatttgcac cagtataatg caggctgttt ttatctttat aatattgacg
      961 ttttgccatg accgaatccg tccgcctccc cgtcgcccgt ctcaaacctt ccaccgtcgc
     1021 cctgcccggc tccaaaagca tcagcaaccg caccctgctg cttgccgcct tgtccgacaa
     1081 tgcttgcgaa atccattccc tgctcaaatc cgacgatacc gaccgtatgc tcgaagcact
     1141 cgataaactc ggcgttcaaa tcgaatatct tgccgaagac cgtctgaaag tgcacggcac
     1201 aggcggacgc ttccccaacc gcactgccga tttgtttttg ggcaacgcgg gcacggcgtt
     1261 ccgtccgctg actgccgcac ttgccgtttt gggcggcgat tatcatctgc acggcgtgcc
     1321 tcgtatgcac gaacgcccca tcggcgattt ggccgatgcg ctgcggattg ccggcgccga
     1381 tgtcgaatat ctcggcaagg aacactatcc gccgcttcat atcggcaaac gtcaagacaa
     1441 cggcgaacgc gtgattccga ttaaaggcaa tgtgtccagc cagtttctga ccgccctttt
     1501 aatggcgttg ccgctgaccg ggcaggcgtt tgaaatccgt atggtcggcg aattgatttc
     1561 caagccctat atcgacatta ctttaaaact gatggcgcaa ttcggcgtac aggttgccaa
     1621 tgaaaactac cgcgtcttca aaattcccgc cgatgcgcac taccacgcgc ccgaacactt
     1681 gcacgtcgaa ggcgatgcct ccagcgcgtc ctacttcctc gcagccggtt tgattgctgc
     1741 cacgcccgtg cgcgtgaccg gcatcggcgc aaacagcata cagggcgatg tcgcctttgc
     1801 ccgcgagctg gaaaaaatcg gggcggacgt ggtttggggc gaaaacttcg tcgaagtttc
     1861 acgcccgaag gaacgtgccg tccaatcctt tgatttggat gcgaaccata tccccgatgc
     1921 cgccatgacc ctcgccatcg tcgcgcttgc tacagggcaa acctgcacgc tgcgcaacat
     1981 cggttcgtgg cgcgtcaaag aaaccgaccg catcgccgcg atggcaaacg agttgcgcaa
     2041 actcggggca aaagtcgtcg aagaagccga agcaattcac atcaccccgc ccaaaacgct
     2101 gacacccgac gccgtcatcg acacgtacga cgaccaccgc atggcgatgt gtttctcgct
     2161 ggtttcgctg ttgggcgtac ccgtcgtcat caacgatccg aaatgcaccc ataaaacctt
     2221 cccgacttat ttcgacgtgt tctcttcact gaccgaaaca acggaataag gcggcatttt
     2281 gccgcgattc cggcgcggcg cggcgggcgg ctcattctgt aaagaaagta tgtgcgccga
     2341 ggtagttttt ggcgtaaaac ggtgtggaga gtttttcggt tttgatggtt ttgccgctgc
     2401 tgggggcatg gatgaattcg ccgttgccga tatagagtcc gacgtgtgag tagcggtgtg
     2461 tgccgccggt gttgaagaat acgaggtcgc cggccttaag gcggctgtcg gggattttgc
     2521 ggcttgccgc cgccatgtcg cgggcggtgc gcggcagctt gacgttgagg gcgtttttgt
     2581 aaacgaattg aatcatgccg ctgcaatcga agccggttgc ggtgctgctg ccgccccatt
     2641 tgtagggcgt gccgatgagt ccgaggctgt ggagcatgag ttcctgcgag ccttgtgtgc
     2701 ggtcgatgtg gctgatgcgg acggcttgga tttgccggac tgtctgtttg ggtttcggtt
     2761 ggcggtgttt gccggaggtc gtgccgcatg aggcgaggag cagtgcgctg agacagagga
     2821 aaagggtttt gtcgggggga aacatggttt ttcctttgcg ggttcggata tccgtctgaa
     2881 ggt
//
LOCUS       DBBZXU010000154         2883 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.154, whole genome shotgun sequence.
ACCESSION   DBBZXU010000154 DBBZXU010000000
VERSION     DBBZXU010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2883
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.154"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(417..1187)
                     /gene="xth"
                     /locus_tag="ACJJDE_001988"
     CDS             complement(417..1187)
                     /gene="xth"
                     /locus_tag="ACJJDE_001988"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HGG7541852.1"
                     /translation="MKITTWNVNSLNVRLPQVQNLLADNPPDILVLQELKLDQDKFPA
                     AALQMMGWHCVWSGQKTYNGVAIVSRNAPEDVHIGLPALPDDPQRRVIAATVGGVRVI
                     NVYCVNGEALDSPKFKYKEQWFAALTEFVRDEMTRYGKLVLLGDFNIAPADADCYDPE
                     KWHEKIHCSSVERQWFKNLLDLGLTDSLRQVHPEGAFYTWFDYRGAMFQRKLGLRIDH
                     ILVSPAMAAALKDVRVDLETRALERPSDHAPVTAEFDW"
     gene            complement(1247..1528)
                     /locus_tag="ACJJDE_001989"
                     /pseudo
     CDS             complement(1247..1528)
                     /locus_tag="ACJJDE_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003709912.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ArsR/SmtB family transcription factor"
     gene            complement(1667..1906)
                     /locus_tag="ACJJDE_001990"
     CDS             complement(1667..1906)
                     /locus_tag="ACJJDE_001990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541853.1"
                     /translation="MSDKEPPNRNPVIASRRKCRLKYSSDGIFREGRDALEKTAFQAG
                     ILFARQRGGIGRAGERTGAAVLCCLKARLYACLQK"
     gene            complement(1934..2815)
                     /gene="nadC"
                     /locus_tag="ACJJDE_001991"
     CDS             complement(1934..2815)
                     /gene="nadC"
                     /locus_tag="ACJJDE_001991"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HGG7541854.1"
                     /translation="MPSENTLFPLPDTLLRPMVEQALSEDLGRRGDITSAAVIAPEKT
                     AKLFLVSREDGVIAGMDLARLAFQTMDPSVRFQAEIRDGQVVRAGQTLAAVEGNARAL
                     LAAERTALNYLTHLSGIATATARAVAEVAEYGTDIVCSRKTIPLLRVLQKYAVRAGGG
                     VNHRMGLDDAVLIKDNHLAYCGSIAQAVRQAKQAVGPLTCVEIEVDTLAQLDEAIAAG
                     AERILLDNMDDETLKEAANRCHTQTAHPHTVYCEASGGIGFDRLKRVAQTGVDGIALG
                     YLTHSSRSLDIGLDFLA"
BASE COUNT          653 a          736 c          772 g          722 t
ORIGIN      
        1 ttattgcctt tgggagaatc aattctgaca gcacataaca taggttcatc tttacagtcg
       61 ttatattggg tttcatcaaa ctcaactgca tagcacaata aaggcaatag gaaaaaaagg
      121 agattaattt attactatac ataaggcagc ctgactattc attctaaaat aaatccggtt
      181 tttaatattt gattctgctc cggattatat acataataaa ttttactgct ccaaaatctg
      241 atattaaccc tatggatttc ataaattttt cagaaaaata ggctgtgctt gaacaatccg
      301 ccgactccgg ctgtttgtca gggaaaaggc aattattttc ggttagtcag cagcctatcc
      361 tattgaatca cttaaagata tggatgtttg tcaacgccat atcaaaacac ggtcttttac
      421 caatcgaatt ctgccgtcac cggcgcgtgg tcgctcggac gctccagcgc gcgcgtctcc
      481 aaatcaacgc ggacatcctt caacgccgcc gccatcgcag gcgacaccaa aatatggtcg
      541 atacgcaggc ccagtttgcg ttggaacatc gcgccgcgat agtcgaacca ggtatagaac
      601 gcgccttcgg gatggacttg gcgcaggctg tcggtcagtc ccaaatccag caggtttttg
      661 aaccactgcc gttcgacgga cgaacagtgg attttttcgt gccatttttc agggtcgtaa
      721 cagtccgcat cggcaggcgc gatattgaaa tcgcccagta gcaccagttt gccgtagcgg
      781 gtcatttcat cgcggacaaa ttcggttaac gcggcaaacc attgttcttt atatttgaat
      841 ttcgggctgt cgagggcttc gccgttgacg caatagacat tgatgacgcg cacaccgccg
      901 acggttgccg caatcacgcg ccgttgcgga tcgtccggca gcgcgggcag cccgatatgc
      961 acgtcttccg gcgcgttgcg gctgacgatt gccacgccgt tgtaggtttt ctgcccgctc
     1021 caaacacagt gccagcccat catttgcaaa gcggcggccg gaaatttgtc ctgatcgagt
     1081 ttgagttcct gcaaaaccaa aatatcgggc ggattgtcgg caagcaggtt ttgcacctgc
     1141 ggcagccgca cattgagcga attgacgttc caagtggtga ttttcataac atttccgaaa
     1201 aatgccgtct gaaacgttca gacggcaaaa ggaaaggatt ttaacactat accgcgcgtt
     1261 tgttttccaa atcgcggatt gtccgcagaa tcgttgccgc gtcttcggaa atcaggcggt
     1321 attcgataat gcggtgctaa cgcgtaaagt ccaccagacc ttccacgcgc agtcggctca
     1381 aatggttgga aaccgctgtc gcaggcatgg acagggattc ggacagctcg gcaatattgc
     1441 aatcgccgtc caacagttgg agcagtatcg ccatacgttc gggatgcgcc ataagtttga
     1501 gtatggtgtg gagcggtatt gtgttcatcg gtattcctaa aaccttttcc gcccgccaag
     1561 cggattgacg ggcggcagat atggatgatt gtgattatct ttataaatta tattataaat
     1621 caattattta tatatgattg tacaggattg tatgttcctt ttaccactat ttttgcaaac
     1681 acgcgtaaag gcgggctttc agacagcata aaactgccgc gcccgtcctt tcccctgccc
     1741 tgccgatgcc tccgcgctgt cgggcaaaca aaatacctgc ctgaaacgct gttttttcta
     1801 aagcatcacg accttcacga aaaatgccgt ctgaagaata tttcagacgg catttcctcc
     1861 ttgaggcaat aaccggatta cggttaggcg gttccttgtc tgacatatca gacaactgcc
     1921 gacaccctaa aactcatgcc aagaaatcca aacctatgtc caacgaacgg ctgctgtggg
     1981 tcagatagcc gagagcgatg ccgtccacgc cggtttgcgc cacgcgcttc agtcggtcga
     2041 agccgatgcc gcccgatgct tcgcaataga cggtgtgggg gtgggcggtt tgcgtgtggc
     2101 agcggtttgc cgcttctttc agggtttcgt cgtccatgtt gtccagcaaa atccgttccg
     2161 cgcccgctgc gatggcttcg tccagttgtg ccaacgtgtc cacttcgatt tctacacaag
     2221 tcaacggtcc gaccgcctgt tttgcctgcc gaacggcttg ggcgatgctg ccgcaatagg
     2281 cgaggtggtt gtctttgatg agcacggcgt cgtccaagcc catgcggtgg ttcacgccgc
     2341 cgcctgccct gacggcgtat ttttgcagga cgcgcagcag ggggatggtt ttgcggctgc
     2401 acacgatgtc tgtaccgtat tcggcgactt cggcaacggc acgcgcggtg gcggtggcga
     2461 tgccgcttaa gtgcgtgagg tagttgagcg cggtgcgttc ggcggcgagc agcgcgcggg
     2521 cgttgccttc gacggcggca agcgtctgac ctgcgcggac gacttgcccg tctcggattt
     2581 cggcttggaa gcgaacggac ggatccatcg tctgaaaggc gaggcgcgcc aagtccatgc
     2641 cggcgataac gccgtcttcg cggctgacga ggaagagttt ggcggttttt tcgggggcga
     2701 taacggcggc ggacgtaata tcgccgcgcc tgcccaaatc ttcgctcaag gcttgttcca
     2761 ccatggggcg caacagggtg tcgggcaggg ggaagagggt gttttcagac ggcatggtgt
     2821 ttcctttgtt gaaaaagatt gatattgccc gatggggcaa aacttcattt tatagtggat
     2881 taa
//
LOCUS       DBBZXU010000155         2867 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.155, whole genome shotgun sequence.
ACCESSION   DBBZXU010000155 DBBZXU010000000
VERSION     DBBZXU010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2867)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2867)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2867
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.155"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..372
                     /locus_tag="ACJJDE_001992"
     CDS             <1..372
                     /locus_tag="ACJJDE_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014575200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7541855.1"
                     /translation="AAANKGKCQDGAIGAAVGEILGEALLDGRDPGSLNVKDRAKIIA
                     KAKLAAGTVAALSKGDVNAAANAAAVAVESNALSKERMDKLTKCLSGKTCSTTMEKVN
                     AIKKDEQFSKVIDTEIQKSLF"
     gene            410..892
                     /locus_tag="ACJJDE_001993"
     CDS             410..892
                     /locus_tag="ACJJDE_001993"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541856.1"
                     /translation="MSIKYIAMPAAWKYMPTDVSRVAKEVFGYLYNSQGASTRFDKYF
                     NTIDNRADFFAASNLYEQNLGSKARWFGGADFVSRAAITGLGADGEASYITFAAGKVV
                     GNPPIYEWRAASGNALIVNGFYNFRDLFNKKTNPREWDIQQLKSEQKLLQPIQPKIFE
                     "
     gene            1072..1506
                     /locus_tag="ACJJDE_001994"
     CDS             1072..1506
                     /locus_tag="ACJJDE_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541857.1"
                     /translation="MNKNYLFYLIQNIKSIFLIGGVFFGLLIFSGLWGNDFKLSFLGV
                     IDFIFGMVGGGFIVMLWFLIPVILSTLFRWVFQNQLAVSVILTFIVFYTYGYFSLFNS
                     SERVGSFWYLVIPTIMFIGLSEWFIYKSSVHSLGENVTPRSN"
     gene            complement(1574..1842)
                     /locus_tag="ACJJDE_001995"
                     /pseudo
     CDS             complement(1574..1842)
                     /locus_tag="ACJJDE_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244123.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS30 family transposase"
     gene            1841..2014
                     /locus_tag="ACJJDE_001996"
     CDS             1841..2014
                     /locus_tag="ACJJDE_001996"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541858.1"
                     /translation="MIKQVANNLPDGSPAKAAVFKAEREGKLKTAIAGVDRQTGKAVI
                     LSVKVPSKTNIRR"
     gene            2017..>2867
                     /locus_tag="ACJJDE_001997"
     CDS             2017..>2867
                     /locus_tag="ACJJDE_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HGG7541859.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPEAIDYVDERKGVP
                     LAAMRHILMYTEAAASHAYLFEHDLNKFKQYAYVAGKLGILRSVNSTDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNRYDLNRHMIYNTLLMVEGKQ
                     LDRLKQRSEKVLAHPTPSKWLQKRLYDYRFFLAFAEQDAEAMKAALEPLFDKKTARMA
                     AKETLSYFDFYLQPQIVTYAKIASMHGFDLGIDQEIAPRDLIVYDPLPADEYQDIFDF
                     MKQYDLS"
BASE COUNT          853 a          507 c          657 g          850 t
ORIGIN      
        1 gcggcggcga ataagggcaa gtgtcaggac ggcgcgatag gagcggcggt cggtgaaatc
       61 ctcggcgaag ccctactgga cggcagagac cctggcagcc tgaatgtgaa ggacagggca
      121 aaaatcattg ctaaggcgaa gctggcagca gggacggttg cggcgttgag caagggggat
      181 gtgaatgctg cggcgaatgc ggctgctgtg gcggtagaga gtaatgcgct tagcaaggaa
      241 agaatggata aattgacaaa atgcctttcc ggtaaaactt gttctactac gatggaaaaa
      301 gtaaatgcca tcaaaaagga tgaacaattt agcaaagtaa ttgatacgga aattcaaaaa
      361 agtctgttct aggaacccat tgggcgatgg ttgcagaaac ggcattaata tgtctattaa
      421 atatattgcc atgcctgctg cgtggaagta tatgcctacg gatgtatcac gggttgccaa
      481 agaagttttt ggctatttat ataactcaca aggggcatct acaagatttg acaagtattt
      541 caacaccatt gacaatcgtg cagatttctt tgctgccagc aatctttatg agcaaaattt
      601 gggttcaaaa gcacgatggt ttggtggagc tgattttgta tcgcgtgctg ctataactgg
      661 gttaggggca gacggagaag cttcttatat aacttttgcg gcaggtaaag ttgttggtaa
      721 tcctccaatt tatgaatgga gggctgcgtc aggcaatgca ctgatagtaa atggatttta
      781 taattttaga gacttgttca ataaaaaaac taatcctagg gagtgggata ttcaacagtt
      841 gaaaagcgag caaaagttat tacagcctat tcaaccaaaa atatttgagt aatgagaagg
      901 attatttgtc attgattaaa ggggtaacat caaataagat attttcaata attccaaatc
      961 ctttagatga gaggaaaaaa tagaggatgg aattaatatg ttagattaca aatctagaat
     1021 taaatatggt tgtaagctta tgggatattc tgagaaacag ggatgcaagc catgaataaa
     1081 aattatttat tttatcttat tcaaaatatt aaatctattt tcttaatagg tggagtattt
     1141 tttggccttt taattttttc aggtttatgg ggtaatgatt ttaaactatc ttttttaggg
     1201 gtaatagatt ttatatttgg gatggtaggg ggtgggttta tagttatgtt atggtttcta
     1261 attccagtga tattatcaac tttattcaga tgggtatttc aaaatcaact tgctgtatct
     1321 gtcatattaa ccttcattgt tttttataca tatgggtact tttctttatt taattcatct
     1381 gaaagagtcg gtagtttttg gtatttggta atcccaacca taatgtttat tggactgtct
     1441 gaatggttta tctataaatc tagcgtgcat agtttaggtg aaaatgtaac tccacgttcc
     1501 aattgaagaa aaagattgtc tgaaaactaa atttaatttc agatgacctt agattcggat
     1561 ttcaagtaca acactagggt atcgatggtt ggaacaaatt caagaataaa acacttggcg
     1621 tttcgtagcc aagtgttttt ctcggtcggt ggttcaactc atcttgaacc ctacgtatct
     1681 cccgatcgct gatgtttcgg aaaacggttt gtttggggaa tattgtcgga tgagtccatt
     1741 ggtgttttca ttcagccctt tctcccaaga atggtaaggg cggtaaaaat aggtttccgc
     1801 cttcaatgtt ttggccattt ggatgtgtcg gtagaattct ttgattaaac aagttgcaaa
     1861 taacttacct gatggtagtc ctgctaaagc tgctgtcttc aaagcggagc gggaaggcaa
     1921 attaaaaacg gcaatagcag gcgttgatcg tcaaacaggt aaggccgtta ttctttctgt
     1981 caaagttcct tctaaaacca atataaggag ataacaatgg ggcacaatat gatgaccacc
     2041 caaaaatggt atgagcatat tactaatgta atcataggca atactgctaa tttcaatagc
     2101 ggttgccctg aagctataga ttatgtagat gaaagaaaag gcgttccact tgcagcaatg
     2161 agacatattt taatgtacac tgaagctgcg gcttcccatg cctatctatt tgaacatgat
     2221 cttaataaat tcaagcaata tgcttatgtt gcaggaaagc tgggtatttt gcggagtgta
     2281 aattctacag accctgaacc cttcttcttt ccctgtgaca tgctcaacat tcaagatccg
     2341 atgtttctga tgctgatgag cgacagcccg cagctgcgtg agtttctggt gcgcaatatc
     2401 gacaacatcg ccaacgatac agaagccttc gtaaaccgct acgacctcaa ccgtcatatg
     2461 atttacaata ctctgctgat ggtggagggt aagcagcttg atcggttgaa acaacgtagc
     2521 gagaaagtct tggcgcatcc cacccctagc aaatggctgc aaaagcggtt gtacgattac
     2581 cgcttcttcc tcgctttcgc cgaacaggat gccgaggcga tgaaggccgc cttagagccg
     2641 cttttcgata aaaaaaccgc gcgtatggct gccaaagaaa cattgtccta tttcgatttc
     2701 tacctgcagc cgcaaatcgt tacctacgcc aaaatcgcat ccatgcacgg tttcgatttg
     2761 ggcatagatc aagaaatcgc accgagggat ttgattgttt acgatccgct gccggcagac
     2821 gaatatcaag acatcttcga ttttatgaaa cagtacgact tgtctta
//
LOCUS       DBBZXU010000156         2777 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.156, whole genome shotgun sequence.
ACCESSION   DBBZXU010000156 DBBZXU010000000
VERSION     DBBZXU010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.156"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1350
                     /locus_tag="ACJJDE_001998"
     CDS             <1..1350
                     /locus_tag="ACJJDE_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA non-specific endonuclease"
                     /protein_id="HGG7541860.1"
                     /translation="AAIGYATGGSGGAVVGANVDWHNRQLHPSERDWIRKNAQAFAKQ
                     EVGGREPTIDEIALAEKRLAQQAAKETDLFWMLTLEKVTDLSAQKFLRQAKGTFTNEN
                     GTQQQFFTTQGKQFMRPELFANEVYDLSFYKNHLQSPKNSSISKGTGELARRVTSSTW
                     DKAKQDPILTGLQIAASPVHLVRDVGKASWQCVSGFGQCLQQGKENFVETGSAIGTGT
                     ASFQLNDLKPIYGQDVRGAQAGLVALQTADGITTALGAAKALNVAGKGSRYFINEWAS
                     SPPSGSRAAQRGAVGNLTHSQQVLTDGSHIQRGGKLLPNIRYKAGEFDYLYETDTLGR
                     IKSFETDNLQLTQRDRLKHNSKTPDKVKGQDHAGHLIGDRFGGSPNLDNLVSQHKDVN
                     LSAYKVLENKWAEAIKSGKNVKIQMQIEYAAGTRHPTRFVGYYWIDGKPTRININNL"
     gene            1365..1811
                     /locus_tag="ACJJDE_001999"
     CDS             1365..1811
                     /locus_tag="ACJJDE_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541861.1"
                     /translation="MIFEDYFSELQADMVSICLEYVQGKADKIYIYAAFEPRVSGAGC
                     FFSVKGKLVQRHLVNQEIPEVNLDHQIQVLDILMEDLEKLNSICQKFNQPMPTEIKMI
                     YDVKKNSLSANYQYNLILSSESGLLALPQDVEDAWFEEIKKQMEDN"
     gene            1967..2317
                     /locus_tag="ACJJDE_002000"
     CDS             1967..2317
                     /locus_tag="ACJJDE_002000"
                     /inference="COORDINATES: protein motif:HMM:NF045464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6883 domain-containing protein"
                     /protein_id="HGG7541862.1"
                     /translation="MPTLRLLIPNADSVIIDTRKFTDYALNPNHDVGRHKARVFESAL
                     GYNQSNATELILKIRQGLKDNPARLGKKDQYGQRYTVDIPITGPNGKTAIVTTGWILV
                     PGSEIPKMTTVLVK"
     gene            2327..2518
                     /locus_tag="ACJJDE_002001"
     CDS             2327..2518
                     /locus_tag="ACJJDE_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4926 domain-containing protein"
                     /protein_id="HGG7541863.1"
                     /translation="MNLNDVVKLKVKQPNSNVPEGSIGTIIEVLQELPSAVFEVEFIN
                     KNGELIDTLTLAECDIEPA"
BASE COUNT          970 a          441 c          601 g          765 t
ORIGIN      
        1 gcggcaatcg gctatgcaac tggtggtagt ggtggtgctg tggtgggtgc gaatgtagat
       61 tggcataatc ggcagttgca tccgagtgaa agagattgga taagaaaaaa tgcacaagct
      121 tttgcgaaac aggaggtagg tggtagagaa cccactatag atgaaattgc attagcagaa
      181 aaacgactag cacaacaggc ggctaaagag acagatttgt tttggatgct aacattagaa
      241 aaagtaacag atttatcagc tcaaaaattc ctaagacaag caaaaggaac ttttacaaat
      301 gaaaatggta cgcagcaaca attttttact acgcaaggga agcaatttat gcgtcctgaa
      361 ttgtttgcta atgaagtata tgatctgtct ttttacaaaa accatttaca atctcctaaa
      421 aatagtagta tcagcaaggg tacaggagaa ttggctcgaa gagttacttc atctacttgg
      481 gataaagcaa aacaagatcc tattttgaca ggattgcaaa tagctgcctc ccctgtacat
      541 ttagttcggg atgtaggtaa ggcaagctgg cagtgcgtaa gcggctttgg acaatgtttg
      601 caacaaggaa aagagaattt tgtagaaaca ggttctgcaa ttggaacagg aactgcctct
      661 tttcaactaa acgaccttaa gccgatttat ggtcaagatg tacgtggtgc acaagcagga
      721 ttggttgcac tacaaacggc agatggaata actacggcat tgggtgcagc aaaagcatta
      781 aatgttgcag gaaaaggtag tcgctatttt ataaatgaat gggctagtag tccgcctagt
      841 ggttctcgtg ctgcacagcg tggggcagtg gggaatttaa cccattcgca acaagttttg
      901 acagatggtt cacatattca acgtggcgga aaacttttac ctaatattcg ctataaagca
      961 ggcgagtttg attatttata tgaaactgat actttaggta gaattaaaag ttttgaaaca
     1021 gataatttgc aattaacaca gagagataga ttaaagcata attcaaaaac tcctgataaa
     1081 gtcaaggggc aagaccatgc aggacattta attggagata gatttggagg ttcgcccaat
     1141 ttagataatt tagtgtcaca gcacaaagat gtaaacttaa gtgcgtataa agttttggag
     1201 aataaatggg cggaagcaat taaatcagga aaaaatgtta aaatccaaat gcaaattgaa
     1261 tatgcagcag gtacaagaca ccctacacga tttgttggat attattggat tgatggtaaa
     1321 ccaactagaa ttaatattaa taatttatga aacaaggatt ttttatgatt tttgaagatt
     1381 attttagtga attacaagca gatatggttt ctatttgttt ggaatatgtt caaggtaagg
     1441 ctgataaaat ttacatttat gcagcttttg agcctcgtgt tagtggtgct ggatgttttt
     1501 tctctgttaa aggaaaactt gtacaacgac atcttgttaa tcaagaaatt ccagaagtta
     1561 atcttgacca tcaaattcaa gtattagaca tacttatgga agatttagaa aaactaaatt
     1621 ctatttgtca gaaatttaac caacctatgc caactgaaat taaaatgatt tatgatgtaa
     1681 aaaagaatag cttatcagca aattatcaat ataatttaat cttgtcatct gaatctggat
     1741 tacttgcttt accgcaagat gttgaagatg catggtttga agaaattaag aagcaaatgg
     1801 aagataatta attcacagca agcgtagcaa gcgtagggtg ggcaactcgt tgcccacgca
     1861 gttcaatcgt atatgttaaa atgatgtttt aatgtgaaat atttcatttc aggctgcctg
     1921 aaaaaataaa ataacgtggc gtgtatcaaa ccgcgtgggc aacgagttgc ccaccctacg
     1981 cttgctaatc cctaacgctg attctgtcat aatcgatacc agaaaattta cagattatgc
     2041 attgaatcct aatcatgatg ttgggagaca taaagctaga gtttttgaat cagctctagg
     2101 atataatcaa tctaatgcaa ctgagctaat tttgaaaatt agacaaggat taaaagataa
     2161 ccctgcaaga ttaggaaaaa aagatcaata tgggcaaaga tatacagtag atattcctat
     2221 tactggacct aatgggaaaa cagccattgt aactacaggc tggattttag tgcctggatc
     2281 tgaaattccc aaaatgacaa ccgttttagt aaaataggtg ccaataatga atttaaatga
     2341 tgttgtaaag cttaaagtaa aacagcccaa tagtaatgta cctgaaggta gtataggtac
     2401 aataatcgaa gttcttcagg aattgccatc tgctgttttt gaagtggaat ttataaataa
     2461 aaatggcgaa ctaatcgata cattaacgct agcagaatgt gacatagagc cagcgtaacc
     2521 tgtgcaatta atgcgaactg ttacatggta gggtgggcaa ctcgttgccc acgcagttca
     2581 gtctcatgtg ctaaaactat gttttaaggc gaaagttttg gattgggcgc aagtgcgtcc
     2641 ataagcggca aaacactggg acagggcgca aaaaataaac ctcaaaacaa acacctgaca
     2701 agcgtagccg ataaaaacgg cgcaagttca tcagtgggtt atggcagcga ccaagacagt
     2761 caaagcagca tcacgaa
//
LOCUS       DBBZXU010000157         2746 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.157, whole genome shotgun sequence.
ACCESSION   DBBZXU010000157 DBBZXU010000000
VERSION     DBBZXU010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.157"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(366..749)
                     /locus_tag="ACJJDE_002002"
     CDS             complement(366..749)
                     /locus_tag="ACJJDE_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003675734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541864.1"
                     /translation="MEKIKNYIEFKKLFKNITEKFVRDLDITLIEAAEYSIIEFEIYL
                     SEYPEDSTFIFTAWAIYLLENNCLNERGKDNFFIAEMKKCYQQTNLDRIKSIYSSSDY
                     HIFAKDVNKIQQTFKLNLANIMQQE"
     gene            complement(754..1591)
                     /locus_tag="ACJJDE_002003"
                     /pseudo
     CDS             complement(754..1591)
                     /locus_tag="ACJJDE_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="deaminase domain-containing protein"
     gene            complement(1890..2285)
                     /locus_tag="ACJJDE_002004"
     CDS             complement(1890..2285)
                     /locus_tag="ACJJDE_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541865.1"
                     /translation="MNQFCLSEYEKAFLCRIIENNMIWKEYLIEQIENSIIVSRDNTG
                     CGCYIDFQVNLERTNLNKYENIPIFFEGDITAPDKSDAATFLLYTTESLNKAGRIIDF
                     LEVAIAGTNYDEVEVYSWLKMENSLRFGL"
     gene            complement(2297..>2746)
                     /locus_tag="ACJJDE_002005"
     CDS             complement(2297..>2746)
                     /locus_tag="ACJJDE_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541866.1"
                     /translation="ENNSLFQPQTTLEAGVRNAILRGDIQELRLLLGEANFSTADAAY
                     AQRILASMEKIGESNSRLLAERYGVDWLNKVHHIFKGHQGSIGNTLIQKSGSMENAVV
                     ATQKAVDALKLTKTGNYPVTVTVNGITVIVRVYVNNGVSRIATILKM"
BASE COUNT          806 a          530 c          463 g          947 t
ORIGIN      
        1 gcttcgatgt ttgccgcact cagactgatg cggctgttct cattggcata cggtgcgcta
       61 atgctcacac cggttttacc cgaaagttct gcagcaagcg tagggggtgt cttcagcacg
      121 cacgcgtctg ggcagtatat agggaatctg aatatttact tgcataacaa atgccgtctg
      181 aaaaattgtg agcttttcag acggcattga gccgtaaatc atggaacgcg tgcgtgctgg
      241 agcacacacc ttacgcatgg attttaggtt tcatgcaggc tacagcttgc tgctgcggta
      301 taaaagtatt tttagtgatt tactgttttt ggtatttttg cccgacgggg ttaaaaatac
      361 agttgctact cttgctgcat gatattggca agatttaatt taaatgtttg ttgaatcttg
      421 tttacatcct tagcaaaaat atgatagtca ctcgaagaat agatagattt tattctatcc
      481 aaattagttt gttgataaca ttttttcatt tccgcgatga aaaaattatc ttttcctctt
      541 tcattgagac agttattttc taacagatag attgcccatg ctgtaaaaat aaatgtacta
      601 tcttccggat attcagataa ataaatttcg aattcaatta tagaatattc agctgcttca
      661 attaatgtta tatctaaatc cctgacaaat ttttccgtta tatttttaaa taatttcttg
      721 aattctatat aattttttat tttttccatg attctatttt cctgtaaaaa tatttaattg
      781 aatatttgga tagcgatttc taaactctaa aataacattg ctgcaagatt gacaggcctt
      841 taattctgta aatagatcaa ttctacctga tacattacga ttatttccga gttgctgtgc
      901 tatagtttca agtaatttat attctccatc tatatttctt aatgttcctc taggaggaga
      961 ggcaatatta tgatatttat caacagatat aggtttaaaa atttttgttt caggtaacga
     1021 aataaatcca tgttcccctt tttggaaaga actaaatgct tccatccttt gcggtaatcc
     1081 tttaacatca atttttgcta tcgcaagatt ccctatttgt cgatactctt ccggcagttt
     1141 catgcggact ctctggcttt cagcagttaa aagcaggagc actgtcattg ctcagataac
     1201 gggtaacagg tgtaggcttg gccgatattg cagcctgtgc agatacagat cctgcaacca
     1261 tcaatgtgcc attaacaacc tgaactgtac catgcagata ttctccatta gagattgctt
     1321 tcgctccctg tccaatgtta tatccccctg ctgccacagt agctgctttg acactgaagc
     1381 caagcggtcc gtttaataag taaagtgcag gttgtgcggc aacagctgat ttgtaatcaa
     1441 aagaatcata acgactcaat gtttgatagg ctttcgataa agtgttatta atatctttgg
     1501 aaggaatagt gagattaccc attgactggg gcgttttcag tatcgaagct gcccaagctg
     1561 tgttacctcc agaggcttgg ttaataaaat atgttaccta tgtatattgt ttcttcaaaa
     1621 atcaaccgta ttgtccttgg gtgattttcg taccagcaca atcagtctgc cctagttgac
     1681 agatcgcgcc acactagcca gatacagcgt atcattggta aaactgataa tgcggcaata
     1741 taaagaaaaa cttcaatagt atgttaacga aatttgacgc ataaaaatac gctaaaaaat
     1801 tttcgcttga ctaattaaaa atgggattga gcataaaatt ttaataattt atattattga
     1861 aaatatctca gattttcagt cagtttattt tacaagccga accgtaggct attttccatc
     1921 tttaaccatg aatagacctc aacttcatca taatttgtgc ctgcaatagc aacttccaga
     1981 aagtcaataa ttctacctgc tttattcaaa gactctgtag tatatagcag gaaagtcgct
     2041 gcatctgact tatccggtgc agtgatgtct ccttcaaaaa aaatagggat attttcgtat
     2101 ttatttagat tagttctttc taaatttacc tgaaaatcaa tgtagcaccc acatcctgta
     2161 ttatctctag atactattat tgaattttct atttgctcta ttaaatattc cttccatatc
     2221 atattgtttt caataattct acataagaaa gccttctcat attcagataa acaaaactgg
     2281 ttcatatatt ctacccttac attttcaaaa tagttgcaat acgagatact ccattgttga
     2341 catatacgcg aacaattacc gttataccat tgaccgttac agtaactgga taatttcctg
     2401 tttttgtcag ttttaaagca tccactgcct tttgcgtcgc tacaacagca ttttccatgg
     2461 agcctgattt ttgaatcaat gtattaccga tgcttccttg atgcccctta aagatgtgat
     2521 gaactttatt tagccaatct acaccgtatc tttcagccaa tagtcgagaa ttactttcac
     2581 ctattttttc catcgaagct aaaatccttt gagcataggc agcatcagct gttgaaaaat
     2641 ttgcttcgcc caacaaaagc cgtaattcct gaatatctcc tcgtaaaatt gcatttctta
     2701 ctcccgcttc taatgtggtt tgtggctgaa agagggaatt attctc
//
LOCUS       DBBZXU010000158         2715 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.158, whole genome shotgun sequence.
ACCESSION   DBBZXU010000158 DBBZXU010000000
VERSION     DBBZXU010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.158"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..334
                     /locus_tag="ACJJDE_002006"
     CDS             <1..334
                     /locus_tag="ACJJDE_002006"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541867.1"
                     /translation="KTAENLCWGFGCREGKEFCKGLKQKQKPKVPSFPRRRESRPPTR
                     QESIGNNRNRTNLDSRFRGNDGGKVAVFPINSCRSSFLGWREIKQKRAYQKITMQRTV
                     LAILRFAP"
     gene            complement(409..2043)
                     /gene="groL"
                     /locus_tag="ACJJDE_002007"
     CDS             complement(409..2043)
                     /gene="groL"
                     /locus_tag="ACJJDE_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019271863.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA];
                     GO_process: GO:0042026 - protein refolding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HGG7541868.1"
                     /translation="MAAKDVQFGNEVRQKMVNGVNILANAVRVTLGPKGRNVVVDRAF
                     GGPHITKDGVTVAKEIELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQSIVAE
                     GMKYVTAGMNPTDLKRGIDKAVAALVDELKNIAKPCDTSKEIAQVGSISANSDEQVGA
                     IIAEAMEKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINDAEKQIAALDNP
                     FVLLFDKKISNIRDLLPVLEQVAKASRPLLIIAEDVEGEALATLVVNNIRGILKTVAV
                     KAPGFGDRRKAMLQDIAILTGGVVISEEVGLSLEKATLEDLGQAKRIEIGKENTTIID
                     GFGDAAQIEARVAEIRQQIETATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KDRVEDALHATRAAVEEGVVAGGGVALLRARAALENLHTGNADQDAGVQIVLRAVESP
                     LRQIVANAGGEPSVVVNKVLEGKGNYGYNAGSGEYGDMIEMGVLDPAKVTRSALQHAA
                     SIAGLMLTTDCMIAEIPEDKPAMPDMGGMGGMGGMM"
     gene            complement(2136..2426)
                     /locus_tag="ACJJDE_002008"
     CDS             complement(2136..2426)
                     /locus_tag="ACJJDE_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HGG7541869.1"
                     /translation="MTIRPLHDRVVVKRLEAEEKTASGIVLPGAAAEKPDMGEVIAVG
                     AGKIGKDGARRPLDVKVGDKIIFGKYSGQTVKADGEELLVMREEDIFGIVEK"
     gene            2638..>2715
                     /locus_tag="ACJJDE_002009"
     CDS             2638..>2715
                     /locus_tag="ACJJDE_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002257787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7541870.1"
                     /translation="MLPSKYEDNALQIKEKSTERTAPFFC"
BASE COUNT          573 a          712 c          711 g          719 t
ORIGIN      
        1 gaaaacagcc gaaaacctgt gttggggttt cggctgtcgg gagggaaagg aattttgcaa
       61 aggtctcaaa caaaaacaga aacctaaagt cccgtcattc ccgcgcaggc gggaatccag
      121 accaccaacg cggcaggaat ctatcggaaa taaccgaaac cggacgaacc tagattcccg
      181 ctttcgcggg aatgacggcg gaaaggttgc tgtttttccg ataaattcct gccgctcttc
      241 gtttttggga tggcgggaaa taaaacaaaa gcgcgcgtat caaaaaataa caatgcaaag
      301 aacggtgttg gcaattttaa ggtttgcgcc ttagccgcac ttattcgcaa aaaaaccgca
      361 cggcgttgac cgtgcggctt gttgtctgaa ggcttcagac ggcattgctt acatcatgcc
      421 gcccatacca cccatgccgc ccatatcagg catagccggt ttgtcttcag ggatttcagc
      481 aatcatgcag tctgtggtca gcatcaggcc ggcgatagac gcggcgtgtt gcagcgcgga
      541 acgggttact ttggcggggt cgagtacgcc catttcgatc atgtcgccgt attcgccgct
      601 gccagcgttg taaccatagt tgcctttgcc ttccaacact ttgttcacaa ccacgctggg
      661 ttcgccgcct gcgttggcaa cgatttggcg cagcggagac tcaacggcgc gcaagacgat
      721 ttgtacgcct gcgtcttggt ctgcattgcc ggtgtgcagg ttttccagag cggcacgggc
      781 gcgcaacagg gctacgccgc cgcctgcgac cacgccttct tcaacggctg cgcgggtagc
      841 gtgcagcgcg tcttccacgc ggtctttttt ctctttcatt tcgacttcgg tagcggcgcc
      901 gactttgatc actgccacgc cgcctgccaa tttagccacg cgctcttgca gtttttcttt
      961 gtcgtaatcg ctggttgcgg tttcgatttg ttggcggatt tcggcaacac gcgcttcgat
     1021 ttgggctgcg tcgccaaagc cgtcgatgat ggtggtgttt tctttaccga tttcgatgcg
     1081 tttggcttga cccaagtctt ccaaagtcgc tttttccaga gacaggccga cttcttcgga
     1141 aatcaccacg ccgccggtca ggatagcgat gtcttgcagc atcgctttgc ggcggtcgcc
     1201 gaagcccgga gctttgacgg caacggtttt caggatgcct cggatgttgt tcaccaccaa
     1261 agtcgccaag gcttcgcctt ctacgtcttc agcgataatc aacagcggac ggctggcttt
     1321 cgccacttgt tccaaaacag gcagcaggtc gcggatgttg ctgatttttt tgtcaaacag
     1381 caatacaaac ggattgtcca aagcagcgat ttgtttttca gcatcgttga tgaagtaagg
     1441 ggacaggtag ccgcggtcga actgcatacc ttcaaccacg tccagctcgt tttccaaaga
     1501 tttgccgtct tcaacggtaa tcacgccttc tttgccgact ttttccatcg cttcggcgat
     1561 aatcgcgccg acttgttcgt cagagttggc ggaaatcgag ccgacttggg cgatttcttt
     1621 ggaagtatcg caaggtttgg cgatgttttt cagctcgtca accaaagcgg cgacggcttt
     1681 gtcgataccg cgtttcaggt cggtcggatt catacctgcg gtaacatatt tcatgccttc
     1741 ggcaacgatg gattgtgcca gtacggtggc ggtagtcgta ccgtcgcccg ccacgtcgtt
     1801 ggttttggac gcaacttctt tcaccatttg cgcgcccata ttttcaaact tgtctttcag
     1861 ttcgatttct ttggcgacgg ttacgccgtc tttggtgatg tgcgggccgc cgaaagcgcg
     1921 gtcaaccact acgttgcggc ctttgggacc cagggttacg cgcacggcgt ttgccaaaat
     1981 gttcacgccg tttaccattt tttggcggac ttcattgccg aactgtacgt cttttgctgc
     2041 catttcaatt ctccaaaaat cattaaaact gtctgataaa accgtttatg ccgtctgaag
     2101 gcggtttgcc gtttcagacg gcatcgtgtc catatttatt tttcaacgat gccgaagatg
     2161 tcttcttcgc gcatcaccaa cagctcttcg ccgtcggctt tgacggtttg gccgctgtat
     2221 ttgccgaaga tgattttgtc gccgactttg acatccagcg gacggcgcgc gccgtcttta
     2281 ccgattttgc ccgcgcccac ggcgatgact tcgcccatat cgggtttttc ggcggccgca
     2341 cccggcaaaa cgatacccga tgcggttttt tcttcagctt ccaagcgttt gacgacgacg
     2401 cggtcgtgta aaggacggat ggtcatattt atgctccgat aaaatggttt gaaaacaatc
     2461 atctgcccga acggttcgga cagattgaag tggaaaccgg gctgccgcct gccggccgcc
     2521 cgtatgaatc ggcaaaatta gggtgtgtgc gggcaaattc aagtgaggcg gaaaaaattt
     2581 atttccgccg ttttttatag tggactaaat ttaaggggct gtactagatt agcagatatg
     2641 ttaccctcga aatatgaaga taacgcactg caaattaaag aaaaaagtac agaaagaact
     2701 gctccgtttt tttgt
//
LOCUS       DBBZXU010000159         2666 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.159, whole genome shotgun sequence.
ACCESSION   DBBZXU010000159 DBBZXU010000000
VERSION     DBBZXU010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2666
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.159"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..449
                     /locus_tag="ACJJDE_002010"
     CDS             <1..449
                     /locus_tag="ACJJDE_002010"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG7541871.1"
                     /translation="LVFDNPKEGERWLSAMSARLARFVPEEEERRRLLVNIQYESSRA
                     GLDTQIVLGLIEVESAFRQYAISGVGARGLMQVMPFWKNYIGKPAHNLFDIRTNLRYG
                     CTILRHYRNLEKGNIVRALARFNGSLGSNKYPNAVLGAWRNRWQWR"
     gene            560..1942
                     /locus_tag="ACJJDE_002011"
     CDS             560..1942
                     /locus_tag="ACJJDE_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010951164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7541872.1"
                     /translation="MARDNRIQMFPHEWRASTTLSGVYALRMLGMFLVLPVLAVYAAS
                     LPGAEGNKTLVGLAMGIYGLTQALLQLPLGIASDKFGRKKTIYVGLIVFAAGSFLAAA
                     ADTLPMLVAARAIQGAGAVSAAVTALLADLTRDGVRTRAMAMIGLSIGLTFSVSLVVA
                     PVIADAVGVRGLFLLTGILTVASIGVVAWMTPDPEVSKLHEDTQAQPSRIGEVLKNRR
                     LLTLDFGIFALHAAQMALFTALPFAMTQLGLEKIQHWKVYLPSIITGLVVMVPLIIVG
                     ETRNKLKQVFVLGIVCIAAAQLGLLSGMRSVGLITAYLVVYFIGFNVLEASLPSMVSK
                     IAPSDLKGTAMGVYNTMQSLGLFAGGAAGGLLFQKYGFSGVFAFCSILMLLWLVIAVL
                     SPAPKPVKNLSYPVGGVWQGNRDGLQRALSELEGVEDIGFSFDGQTVYLKVLQKGFDQ
                     AAAEKIITGV"
     gene            1946..2470
                     /locus_tag="ACJJDE_002012"
     CDS             1946..2470
                     /locus_tag="ACJJDE_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003710541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HGG7541873.1"
                     /translation="MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQ
                     RVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRIQSRKYQGKDGIERTAYDIVANE
                     MKMLGGRNENSGGAPYEEGYGQSQEAYQRPAQQSRQPASDAPSHPQEAPAAPRRQPVP
                     AAAPVEDIDDDIPF"
BASE COUNT          537 a          719 c          808 g          602 t
ORIGIN      
        1 ggctggtgtt tgacaatccg aaagagggcg aacgttggtt gtctgccatg tcggcacgtt
       61 tggcaaggtt cgtccccgag gaggaggagc ggcgcaggct gctggtcaat atccagtacg
      121 aaagcagccg ggccggtttg gatacgcaga ttgtgttggg gctgattgag gtggaaagcg
      181 cgttccgcca gtatgcaatc agcggtgtcg gcgcgcgcgg cctgatgcag gttatgccgt
      241 tttggaaaaa ctacatcggc aaaccggcgc acaacctgtt cgacatccgc accaacctgc
      301 gttacggctg taccatcctg cgccattacc ggaatcttga aaaaggcaac atcgtccgcg
      361 cgcttgcccg ctttaacggc agcttgggca gcaataaata tccgaacgcc gttttgggcg
      421 cgtggcgcaa ccgctggcag tggcgttgat tttgaacccg cgccgcaacc gaaatacggc
      481 gaatcctgta taatccgaaa atctgttcac tggaagttca gacggcattg caactgttga
      541 tgccgtctga aaaaatatga tggcaagaga caaccgcatc caaatgtttc cgcacgaatg
      601 gcgcgccagt acgacgcttt ccggcgtgta cgcgctgcgt atgctgggta tgttcctcgt
      661 gctgcccgta ttggcggtgt atgccgcctc gctgcccggc gcggaaggca acaaaacgct
      721 ggtcgggctg gcaatgggca tttacgggct gacacaggct ctgctgcaac tgcctttggg
      781 catcgcttcc gacaagttcg ggcgcaagaa aaccatttat gtcgggctga ttgtgtttgc
      841 agcgggcagc ttccttgccg ccgccgccga tacgctgccc atgctggtcg ccgcacgcgc
      901 catacagggt gcgggagcgg tcagtgcggc ggttaccgcg ctgctggcgg atttgacgcg
      961 cgacggagta cgtacccgcg cgatggcgat gatcggtttg agtatcggtc tgacgttttc
     1021 ggtcagcctc gtcgttgccc ctgtgattgc cgacgcggtg ggcgtacgcg gcttgtttct
     1081 gctgaccggt attttgaccg ttgccagtat cggcgtggtg gcgtggatga ctcccgaccc
     1141 ggaggtttcc aagctgcacg aagatacgca ggcgcagcct tcgcgcatag gcgaagtttt
     1201 gaaaaaccgt aggctgctga cgctcgattt cggcattttc gccctgcacg ccgcgcaaat
     1261 ggcattgttt accgcgctgc cttttgcgat gacgcagctc ggtttggaaa aaatccagca
     1321 ttggaaagtc tatctgccct cgatcattac gggcttggtg gtgatggttc cgctgattat
     1381 cgtcggcgag acgcgcaaca agctcaaaca ggtttttgtt ttgggtatcg tctgtattgc
     1441 ggcggcgcag ctcggtttgc tgtccggtat gcgctcggta ggcttgatta ccgcttattt
     1501 ggttgtttac tttatcggtt ttaatgtgtt ggaagcgagc ctgccgtcta tggtttccaa
     1561 aatcgcgccg tccgacctga agggtacggc gatgggtgtg tacaacacga tgcagtcgct
     1621 cggactgttt gccggcggcg cggcaggcgg cttgctgttt caaaaatacg gcttttccgg
     1681 cgtgtttgcc ttttgcagca tattgatgct gctgtggctg gtaattgccg ttttatcgcc
     1741 tgcgcccaag cccgtcaaaa acctcagtta ccctgtcggc ggcgtgtggc agggcaatcg
     1801 ggacggtttg caacgcgcct tgtcggagct tgagggcgtg gaagacatcg gtttcagttt
     1861 cgacgggcag accgtctatc ttaaagtgtt gcagaagggt ttcgatcagg ctgccgctga
     1921 aaaaatcatc acaggagttt aaaaaatgtc attgaacaaa gtcatcctca tcggccgcct
     1981 cggacgcgat cccgaagtgc gctatatgcc caacggcgag gcggtgtgta atttcagcgt
     2041 cgccaccagc gaaacttgga acgaccgcaa cggccaacgt gtagagcgta ctgagtggca
     2101 caacatcacg atgtaccgca aactggcgga aattgccggg caatacctca aaaaaggcgg
     2161 gctggtttat ctggaaggca gaatccaaag ccgcaaatac caaggcaaag acggcatcga
     2221 acgcaccgct tacgatattg tcgccaacga aatgaaaatg ttgggcgggc gcaatgaaaa
     2281 cagcggcggt gcgccttacg aggaaggtta cggtcagagt caggaggctt accaacgccc
     2341 cgcgcagcaa agccggcagc ccgcctccga cgcgccgtcc catccccaag aagcaccagc
     2401 cgcgccgcgc cgccaacccg tgcctgccgc cgccccggtc gaggacattg acgacgatat
     2461 cccgttctga attttacggc cggacatcct cgcggaggga aatcataaag gacggagaaa
     2521 ccttaaacct tacggggcag ggtttctctt ttttgcattt gggccggctt gttgccgccc
     2581 tttgcgttgg gcggaacgtt gcgattgcgc cgttcgggcg ttttgaggca gtgatgcctg
     2641 ccgcacgtcc ccgctgtttt cagacg
//
LOCUS       DBBZXU010000160         2656 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.160, whole genome shotgun sequence.
ACCESSION   DBBZXU010000160 DBBZXU010000000
VERSION     DBBZXU010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2656
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.160"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..819
                     /locus_tag="ACJJDE_002013"
     CDS             <1..819
                     /locus_tag="ACJJDE_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7541874.1"
                     /translation="ATANKGKCQDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVK
                     KITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNG
                     KINVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKGEAAQK
                     VKEVLEKNRPYIPNKGAVPNMSTYMKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQ
                     GLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAAKGRKLNLK"
     gene            828..1205
                     /locus_tag="ACJJDE_002014"
     CDS             828..1205
                     /locus_tag="ACJJDE_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002217880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541875.1"
                     /translation="METLNDIKKILINVGLYQGFDLTDPKVSEEVNHETANMKWIKDY
                     TSDGNWDNEFKEDLKNFLDYMEVCQLALNDKNFKIASNSLFMAMIYAGNLSLIFDSIK
                     TDISTLLSAEYKKNSFSWPSLDE"
     gene            1483..1857
                     /locus_tag="ACJJDE_002015"
     CDS             1483..1857
                     /locus_tag="ACJJDE_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541876.1"
                     /translation="MKNFNVVKESLRELGIKQGFDLYEKATTEKLNSEDPLDLQWLSN
                     YSSDWNDELEEDFDSFFQHMKEYQYAIDNEDIKSACSSLCEAMLYVGNIKNFFEFLKS
                     DMIRLLRGESKTTDFQWPQFDE"
     gene            1928..>2656
                     /locus_tag="ACJJDE_002016"
     CDS             1928..>2656
                     /locus_tag="ACJJDE_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7541877.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPYILPRCVRAEDTPYACY
                     LKQLQVTKDVNWNQVQLAYDKWDYKQEGLTGAGAAIIALAVTVVTAGAGAGAALGLNG
                     AAAAATDAAFASLASQASVSLINNKGNIGNTLKELGRSSTVKNLMVAVATAGVADKIG
                     ASALNNVSDKQWINNLTVNLANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEA
                     ASKIKQLDQHYITHKIAHAIAGCAA"
BASE COUNT          881 a          482 c          609 g          684 t
ORIGIN      
        1 gcgacggcga ataagggtaa gtgtcaggac ggtgcgattg gcgcagccgt gggtgagatt
       61 gttggggaag ctttggttaa aaataccgat tttagcgata tgaccccgga acaattagat
      121 ctggaagtta agaaaattac cgcctatgcc aaacttgcgg caggtacagt tgcaggcgta
      181 acgggaggag atgtcaatac tgctgcacaa accgcacaaa acgcggtaga aaataatgcg
      241 gttaaagctg ttgtaactgc tgcaaaagtg gtttataagg tagccagaaa aggattaaaa
      301 aacgggaaaa tcaacgttag agatttaaaa cagacgttga aagacgaagg ttataattta
      361 gccgacaacc tgaccacctt attcgacgaa acattggatt ggaacgatgc caaagccgtt
      421 attgatattg tcgtcggaac agagctgaat cgcgctaata aaggggaagc ggcacaaaag
      481 gtcaaggaag ttttagaaaa aaatcgtcct tatatcccta ataaaggtgc tgtaccgaat
      541 atgagtacat acatgaaaaa taatcctttt ggaaaacagc tggctcaaat ttcagaaaag
      601 acaacgcttc cgacgcagca agggcagtct gtcttcttgg taaaaagaaa ccaagggtta
      661 ttaaaaaccg gtgataggtt ttatttagat ggccaacata aaaatcattt agaggttttt
      721 gataaaaatg ggaactttaa gtttgttcta aatatggatg gttcgcttaa ccaaatgaaa
      781 actggggcag caaaaggtcg taaattaaac ttaaaatagg aaattttatg gaaacattga
      841 atgatataaa aaaaatcttg attaatgtgg ggctttatca agggtttgat ttgacagatc
      901 caaaagtatc agaagaagtt aatcatgaaa cagctaatat gaaatggatt aaagattata
      961 cttcagacgg gaattgggat aatgaattta aggaggattt aaaaaacttt ttagattata
     1021 tggaagtatg ccaattagcc ctaaacgata aaaatttcaa aattgccagt aattctttat
     1081 ttatggctat gatttacgca ggtaatctat ctcttatatt tgattcaata aaaactgata
     1141 tatcaacatt attgagtgct gagtataaaa agaatagttt ttcatggcca tctcttgatg
     1201 aatagaaagc aagttgtagc ctgcatgaaa tctaaaaccc atgcataagg tgtgggcttc
     1261 agtatacgcg ttccatgatt tacggccata tgccgtctga aaagctcaat tttttcagac
     1321 ggcatttgtt atgaaagtaa atatttagat tccctgtata ctgtttagac tcgtgtgtgc
     1381 tgagtaagct gtagtctgca tgaaacctaa aactcgctca aaattaagct aagacattag
     1441 cagggcaagg gcgaaaattg aatcttaaat aaggtgattc agatgaaaaa ttttaatgta
     1501 gtaaaagaaa gtttaagaga gttaggaatt aaacaaggat ttgatcttta tgagaaagcc
     1561 acaactgaaa aattgaatag tgaagatcct cttgacttac aatggctttc taactattca
     1621 tctgattgga atgatgaatt agaagaagac tttgattctt tttttcagca tatgaaggaa
     1681 tatcaatatg ctattgacaa tgaagacatt aaatctgcat gtagttcact atgtgaagct
     1741 atgctctatg ttggtaatat taaaaatttt tttgagtttc tcaaaagcga tatgattaga
     1801 ctgttgagag gtgaaagtaa aacaacagac tttcaatggc cgcaatttga tgaatagcag
     1861 caagctgtag cctgcatgaa acctaaaatc catgcgtaag gtgtgtgctt cagcacgcac
     1921 gcgttccatg atttacggct caatgccgtc tgaaaagctc acaatttttc agacggcatt
     1981 tgttatgcaa gtaaatattc agattcccta tatactgccc agatgcgtgc gtgctgaaga
     2041 caccccctac gcttgctatt tgaaacagct ccaagtcacc aaagacgtca actggaacca
     2101 ggtacaactg gcgtacgaca aatgggacta taaacaggaa ggcttaaccg gagccggagc
     2161 agcgattatt gcgctggctg ttaccgtggt tactgcgggc gcgggagccg gagccgcact
     2221 gggcttaaac ggcgcggccg cagcggcaac cgatgccgca ttcgcctcgc tggccagcca
     2281 ggcttccgta tcgctcatca acaacaaagg caatatcggt aacaccctga aagagctggg
     2341 cagaagcagc acggtgaaaa atctgatggt tgccgtcgct accgcaggcg tagccgacaa
     2401 aatcggtgct tcggcactga acaatgtcag cgataagcag tggatcaaca acctgaccgt
     2461 caacctggcc aatgcgggca gtgccgcact gattaatacc gctgtcaacg gcggcagcct
     2521 gaaagacaat ctggaagcga atatccttgc ggctttggtg aatactgcgc atggagaagc
     2581 agccagtaaa atcaaacagt tggatcagca ctacattacc cacaagattg cccatgccat
     2641 agcgggctgt gcggca
//
LOCUS       DBBZXU010000161         2581 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.161, whole genome shotgun sequence.
ACCESSION   DBBZXU010000161 DBBZXU010000000
VERSION     DBBZXU010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2581)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2581)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2581
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.161"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(197..268)
                     /locus_tag="ACJJDE_002017"
     tRNA            complement(197..268)
                     /locus_tag="ACJJDE_002017"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(233..235),aa:Arg,seq:cct)
     gene            complement(288..734)
                     /locus_tag="ACJJDE_002018"
     CDS             complement(288..734)
                     /locus_tag="ACJJDE_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HGG7541878.1"
                     /translation="MNFSFVPLFLVTLILLGVVSNNNSITISATILLLMQQTALVQFV
                     PLVEKHGLNLGIILLTIGVLSPLVSGKAQVPPVAEFLNFKMISAVFIGIFVAWLAGRG
                     VPLMGQQPVLITGLLIGTVIGVAFMGGIPVGPLIAAGILSFVVGKG"
     gene            complement(739..1713)
                     /gene="ispB"
                     /locus_tag="ACJJDE_002019"
     CDS             complement(739..1713)
                     /gene="ispB"
                     /locus_tag="ACJJDE_002019"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HGG7541879.1"
                     /translation="MLENLPYFQRHLPEDLAKVNEVINRAVQSDVALISQIGTYIISA
                     GGKRLRPIMTILAGKAVGYDDEKLYSLAAMVEFIHTSTLLHDDVVDESDLRRGRATAN
                     NLFGNAAAVLVGDFLYTRAFQLMVASGSMRVLEVMADATNIIAEGEVMQLMNIGNTDI
                     TEEQYIQVIQYKTAKLFEAAAQVGAILGKASPEHEQALKDYGMYVGTAFQIIDDVLDY
                     SGETEETGKNVGDDLAEGKPTLPLIYLMRQGSEQVANDVRTALENADRSYFEKIHDYV
                     VRSDALAYSIGEARKAVDCAVTALDALPDSEVKDAMIQLAKESLVRVS"
     gene            1937..2245
                     /gene="rplU"
                     /locus_tag="ACJJDE_002020"
     CDS             1937..2245
                     /gene="rplU"
                     /locus_tag="ACJJDE_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HGG7541880.1"
                     /translation="MYAVVKTGGKQYKVSVGEKLKVEQIPAELDSQIELTEVLMIADG
                     ESVKVGAPFIEGAKVTAKVVAHGRGEKVRIFKMRRRKHYQKRQGHRQNFTQIEIVAIA
                     "
     gene            2270..2542
                     /gene="rpmA"
                     /locus_tag="ACJJDE_002021"
     CDS             2270..2542
                     /gene="rpmA"
                     /locus_tag="ACJJDE_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016686478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HGG7541881.1"
                     /translation="MASKKAGGSTRNGRDSEAKRLGVKAYGNELIPAGSIIVRQRGTK
                     FHAGDNVGMGKDHTLFAKVDGYVEFKTKGALNRKTVSIRPYTGSEE"
BASE COUNT          757 a          695 c          575 g          554 t
ORIGIN      
        1 cataaaacaa cagatttcca agccggaaca tcttttacgg agcctgaaaa tcatttcatg
       61 attctaccgt cctaaaggtc ggtttttcaa gcaggaagaa aaagttttca gatggcaaaa
      121 aagccctcca acactgaaag gccttatatc ggaaacttcc cgcaacacgg gaaacagaca
      181 aatgcaaatc gtcaaacctc gccaacagga atcgaacctg tattttacgc ttaggaggca
      241 tacgttctat ccgttgaact atggcgagcc gaaatgaaaa ggagatttta accctttccg
      301 acgacaaaag acaagatgcc ggccgcaatc agcggcccga cagggatacc gcccataaat
      361 gccaccccga taaccgtccc gattaacagc cctgtaatta aaacaggctg ctgtcccatc
      421 aaaggcacgc cgcgtcccgc cagccaagcc acgaaaatac cgataaaaac ggcggatatc
      481 attttaaaat tcaaaaattc ggcaacggga ggaacctgcg cctttcctga aaccaacgga
      541 ctcaaaaccc ctatggtcaa aagaatgata ccgagattca acccatgctt ctcgaccaac
      601 gggacaaact gtaccaatgc cgtctgctgc atcagcagca atatggttgc cgagatggta
      661 atcgaattgt tgttgctgac cacccccaac agaatcagcg taaccagaaa caggggaaca
      721 aaactgaaat tcatcgcctc aagacaccct gaccaaagat tccttcgcca gctgaatcat
      781 ggcatccttc acttcgctgt cgggcagggc atccaaggcg gtaacggcac aatcgactgc
      841 tttgcgcgcc tcgcctatcg aatatgccaa agcatccgaa cggacgacat aatcgtggat
      901 tttctcaaaa tagctgcgat ctgcattttc caaagcagta cgcacatcgt tcgcaacctg
      961 ttcggaaccc tgacgcatca gataaatcaa aggcaaagtc ggttttcctt ccgccaaatc
     1021 gtcgccgacg tttttgccgg tttcttcggt ttcgccagaa tagtccagca catcgtcaat
     1081 aatttggaat gccgtaccga catacatacc gtagtctttc aacgcctgtt cgtgttcggg
     1141 ggaagccttg cccaaaattg cgccgacttg agcggcagct tcaaacaatt ttgccgtttt
     1201 atattggatg acttggatat attgttcttc ggtaatgtcc gtattgccga tgttcatcag
     1261 ctgcatgact tcgccctcgg caataatgtt ggttgcatcc gccatcactt ccaaaacgcg
     1321 catactgccc gaggcaacca tcagttgaaa ggcgcgcgtg tataaaaagt cgccaaccaa
     1381 cacagccgcc gcattgccga acagattgtt tgccgttgcc cgcccacggc gcaaatcgct
     1441 ttcatcgacg acatcgtcgt gcaggagggt ggaagtgtgg ataaactcga ccatcgccgc
     1501 cagcgaatac agtttctcgt catcataacc gaccgcctta cccgccaaaa tcgtcataat
     1561 cggacgcagg cgtttgccgc ccgcgctgat gatatatgta ccgatttgcg aaatcagtgc
     1621 gacatcggat tgcaccgcac ggttgatgac ttcattgact ttggcaaggt cttcaggcag
     1681 atgtcgctgg aaatagggca gattctcgag catggcagac tctcaggttt acgtttccgt
     1741 caaacggcag ataccgcttg aaagctgatt caaatagcgg gcaattatat cagcaaagcc
     1801 atcagggtac atcttttcag acggcatatg gttatccgaa ccgcgcaaac tttgacaaaa
     1861 caggcaaata acaatacaat gccgagttcc gcacaatggt gtgcggatat taaccataac
     1921 ccttatggag ttgagtatgt acgcggtcgt aaaaaccggc ggcaaacagt ataaagtttc
     1981 cgtcggcgaa aaattgaaag tagaacagat accagccgaa ctcgacagcc aaatcgaact
     2041 gaccgaagtt ttgatgattg ctgacggcga atctgtaaaa gttggcgcac cctttatcga
     2101 aggtgcaaaa gtaacggcta aagtagtggc acacggtcgt ggcgaaaaag tccgcatctt
     2161 caaaatgcgc cgccgcaaac actaccaaaa acgccaaggc caccgccaaa atttcaccca
     2221 aatcgaaatc gtggcaatcg cctaacctta aaacttagga gcattacaaa tggcaagtaa
     2281 aaaagcaggc ggcagcaccc gcaacggtcg cgattcagaa gccaaacgct tgggcgttaa
     2341 agcctacggc aacgagctga ttcccgcagg ttccatcatc gtacgccaac gcggtaccaa
     2401 attccacgca ggcgacaacg taggcatggg caaagaccac actttgttcg ccaaagttga
     2461 cggttatgtc gaattcaaaa ccaaaggcgc gctgaaccgt aaaactgtca gcatccgtcc
     2521 ttacaccggt tctgaagaat aatccaaccg atacctgaag ccgcatcttt tcacgatgcg
     2581 g
//
LOCUS       DBBZXU010000162         2485 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.162, whole genome shotgun sequence.
ACCESSION   DBBZXU010000162 DBBZXU010000000
VERSION     DBBZXU010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.162"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(31..837)
                     /locus_tag="ACJJDE_002022"
     CDS             complement(31..837)
                     /locus_tag="ACJJDE_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017201277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HGG7541882.1"
                     /translation="MPTVFIFLTAVYAGLGAFAWHCQQQGRGRDYPWKTELPVLGAAL
                     TVHGAALLMPVIQDKIIIMGFGYSGSLIVWMMLFIYFAGSFFYPLRGVQLLLYPCAAL
                     MLLSGLVFPGKFSGYEITDLPFMLHIGTSLLAYGLFGIATLLSVLTLLLNRSLHRRSF
                     SKLAGFLPSLLSLEKLMFQAMWAGFILLTYSVVSGTFFAEAVFGKPMTFTHKTVFGIL
                     SWLIYGGLLLKHSMTAWRGKKAAVWTIIGFVSLMIAYMGSKFVLEIILNR"
     gene            1057..2427
                     /gene="ffh"
                     /locus_tag="ACJJDE_002023"
     CDS             1057..2427
                     /gene="ffh"
                     /locus_tag="ACJJDE_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HGG7541883.1"
                     /translation="MLDNLTGRFSNVFKNIRGQAKLTEDNIKEALREVRLALLEADVA
                     LPVVKEFINNVKEKALGQEVAGSLTPDQAFIGVVNKALTELMGRENKTLDLSVAPPAV
                     VLMAGLQGAGKTTTVGKLARLLKNDQKKKVLVVSADVYRPAAIEQLRLLAEQVGVDFF
                     PSDTNQKPVEIATAAVDYAKKHFYDVLMVDTAGRLAIDEEMMNEIKALHAAVNPVETL
                     FVIDAMLGQDAVNTAQAFNEALPLTGVVLTKMDGDSRGGAALSVRHVTGKPIKFIGVG
                     EKINGLEPFHPDRLASRILGMGDVLTLIEDVQKGIDEEAAAKMAKKLHKGKGFDLNDF
                     KEQIQQMRNMGGLENLMSKMPGELGQISKQIPEGTAEKAMGKVEAIINSMTPKERANP
                     ALLKASRKRRIAMGAGTTVQEVNKLLKQFEQMQQMMKMFSGNGLGKLMRMAKGMKGMK
                     GMFPGL"
BASE COUNT          681 a          630 c          649 g          525 t
ORIGIN      
        1 ggggactcag acggcatctg ttggctcttc ttatctgttc agaatgattt ccaatacgaa
       61 cttgctgccc atataggcaa tcatcaggct gacaaatccg atgatggtcc acacggcggc
      121 ttttttgccg cgccatgcgg tcatgctgtg cttgagcagc agtccgccgt aaatcagcca
      181 tgacaatatg ccgaatacgg ttttatgggt aaaggtcatg ggtttgccga atacggcttc
      241 ggcaaaaaat gttccgctga cgacggaata ggtcagcagg atgaaacctg cccacatggc
      301 ctggaacatg agtttttcca aactgagcag cgacggcagg aatcctgcga gcttggagaa
      361 gctcctgcgg tgcaggctgc gattcagcag cagggtcaaa acggacaata atgttgcgat
      421 gccgaacagc ccgtatgcaa gcagcgaagt tccgatatgc agcataaagg gaaggtcggt
      481 aatttcatat cccgagaatt ttccaggaaa aaccaaacct gacagcagca tcagtgcggc
      541 gcaaggatac agcagcaact gcactccgcg cagcggataa aagaagctgc cggcaaaata
      601 aataaacagc atcatccaaa caatcaggct gccggaatac ccgaagccca taatgatgat
      661 tttgtcttga atgaccggca tcagcagtgc cgcgccgtgg acggtcaatg ccgcgcccaa
      721 aaccggcaat tccgtcttcc acgggtaatc ccgaccgcgc ccctgctgtt ggcagtgcca
      781 tgcaaatgca cccaatcctg cgtaaaccgc cgtcaaaaag atgaaaactg tcggcatggt
      841 ggactttctc tatctatact gttgcgccgt ctgcggccgc ttatgaaata ttggaacttt
      901 taacgttgga attgtaaaat ccccgtttcg ggcaagcctt gacggatttg ccgatatgct
      961 gtccggcaca caagccgcat caaattattt tgattttatt ttaacaaaga atgcccctga
     1021 tggggcaagc tattcttatt cagaccaagg accagtatgt tagacaattt aaccggccgc
     1081 ttcagcaatg tcttcaaaaa catccggggg caggccaaac tgaccgaaga caatattaaa
     1141 gaggccttgc gcgaagtccg cctcgccctg cttgaggcgg atgtcgccct gcctgtcgtc
     1201 aaagagttca tcaacaacgt caaagaaaag gccctcggtc aggaagtagc gggcagcctg
     1261 acgccggatc aggcatttat cggcgtggtc aacaaagccc tgaccgaact gatgggcagg
     1321 gaaaacaaaa cgctggattt gtcggttgcg ccgcccgccg tcgtgttgat ggcaggtttg
     1381 cagggcgcag gcaagacgac gaccgtcggc aaactcgccc gcctgttgaa aaacgatcag
     1441 aagaaaaagg ttttggtggt atccgccgac gtttaccgtc ctgccgcgat tgaacagctg
     1501 cgtctgttgg ccgaacaggt cggcgtggat tttttcccgt ccgataccaa ccaaaaaccg
     1561 gttgaaattg caactgccgc cgtcgattac gccaaaaaac atttttacga tgtattgatg
     1621 gtcgataccg ccggccgttt ggcaatcgat gaagagatga tgaacgaaat caaagccctt
     1681 cacgcggcgg ttaacccggt ggaaactttg ttcgtcatcg atgcgatgct gggtcaggat
     1741 gcggtgaaca ctgctcaggc atttaatgaa gccctgccgc tgaccggtgt cgtattgacc
     1801 aagatggacg gcgattcgcg cggcggcgca gctttgtccg tgcgccacgt aaccggcaaa
     1861 ccgattaaat ttatcggtgt cggcgaaaaa atcaacggcc tcgaaccttt ccaccccgac
     1921 cgtcttgcca gccgtatcct cggcatgggc gacgtattga ccctgattga agacgttcaa
     1981 aaaggtattg atgaagaagc cgccgccaaa atggcgaaaa agctgcacaa aggcaaaggc
     2041 ttcgacctca acgactttaa agaacaaatc cagcaaatgc gcaatatggg cggtttggaa
     2101 aacctgatgt cgaaaatgcc gggcgaactg ggtcaaatct cgaaacaaat ccccgaagga
     2161 acggctgaaa aagcgatggg caaagtagaa gccatcatca actcgatgac ccctaaagaa
     2221 cgcgccaacc ctgccctgct caaagccagc cgcaaacgcc gtattgcaat gggtgcgggc
     2281 acgaccgtac aggaagtgaa caaattgctc aaacagtttg aacaaatgca acaaatgatg
     2341 aagatgttca gcggcaacgg cttgggcaaa ctgatgcgta tggcgaaagg aatgaaggga
     2401 atgaaaggaa tgttcccggg tttgtaagcc gatttgaccg aaaacgccgt ctaaaatttc
     2461 agacggcgtt tttgttttat attct
//
LOCUS       DBBZXU010000163         2482 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.163, whole genome shotgun sequence.
ACCESSION   DBBZXU010000163 DBBZXU010000000
VERSION     DBBZXU010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2482)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2482)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2482
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.163"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            136..2016
                     /locus_tag="ACJJDE_002024"
     CDS             136..2016
                     /locus_tag="ACJJDE_002024"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0016896 - RNA exonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease catalytic domain-containing
                     protein"
                     /protein_id="HGG7541884.1"
                     /translation="MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAE
                     FDGDMAAFLENAQAQAADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIA
                     LYAAPMYFYKKAKGVFKAAPEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIA
                     ADLKTILHAPDKQSLTYKAFTKAADALKTSAYELGKKTGGITSIPQYLQDGFEIKYFP
                     KGTGFPDLPLPEMPDLPKADVTAFSIDDESTTEVDDALSLTDLGNGTKRVGIHIAAPS
                     LAVKPSDKMEKNIMERLSTVYFPGGKITMLPENWIAAFSLDAGAHRPAVSIYFDVDSK
                     FNVGAPTCKIEAVNISENLRIQAIEPHFNAEAGLDEAGEMMFAHHQDLIWFYQFAITL
                     QKARGKYEPNRAPQYDYSIELDKEDNVSVVRRERGSPIDTLVSEMMILANSTWAQMLH
                     DNDLPGLFRVQPTGKVRMSTKSEPHIGMGVQHYGWFTSPLRRAADYINQKQLISLIDD
                     TAEPLYQNSDAELFAALRDFDAAYTAYADFQRQMEAYWSLVYLQQQGTSELTATILKE
                     DLVRIEGLPLVTRATGIPFDALPKSQALFKITELDAEKQFVSLNYIKAVALAGKTAGN
                     AV"
BASE COUNT          660 a          742 c          584 g          496 t
ORIGIN      
        1 gtactggttt ttgttaatcc actataacgc aagcaccgca aagacgcgcc aaccctctcc
       61 caaccttttt tcagacggca ttttcggtaa tctgctaaaa tcgcccgctt gagtttccac
      121 agaaaaatcc gaaaaatgaa tattttttac gaagagtccg gccaattcaa aatcgccgcc
      181 atcatccaaa aaaacgatgc cacctaccaa gtcgataccc cacacggcaa acgcaccaaa
      241 gtgaaggcga acaacgtctt tgccgagttt gacggcgata tggcggcgtt tttggaaaac
      301 gcgcaggcac aggcggcgga catcgacacc gatttattgt gggaagtatg cggcgaagag
      361 gaatttaccg ccgaagccat cgccgaagaa tattacggcc atgcgccgac caaaaccgag
      421 ctggcggcaa ctttgattgc gctttacgcc gcgccgatgt atttctacaa aaaagccaaa
      481 ggcgtgttca aagccgcgcc cgaagaaacc ttaaaacaag cgcttgccgc catcgaacgc
      541 aaaaaacagc aggacgcaca aatcgacgct tgggcagaag ccttgaaacg cggcgagatg
      601 ccgtctgaaa tcgcggcgga tttgaaaacc atcctgcacg cgcccgacaa gcagtcgctg
      661 acctacaaag cctttaccaa agccgccgac gcgctgaaaa cctctgccta cgaactgggg
      721 aaaaaaacgg gcggcattac gtccattccc caatacctgc aagacgggtt tgaaatcaaa
      781 tacttcccca aaggaacagg ctttcccgac cttccccttc ccgaaatgcc cgacctgccc
      841 aaagccgatg ttaccgcctt ttccattgac gacgaatcga ccaccgaagt ggacgatgcc
      901 ttgagcctga ccgacttggg caacggcacg aagcgcgtcg gtatccacat cgccgcgccg
      961 tcgcttgccg ttaaaccgag cgacaaaatg gaaaaaaaca tcatggaacg cttgagtacg
     1021 gtttatttcc ccggcggcaa aatcacgatg ctgcccgaaa actggattgc cgcgttcagc
     1081 cttgatgcag gcgcacaccg ccctgccgtc agcatttatt tcgatgtgga cagcaaattc
     1141 aacgtcggcg cgccgacctg caaaatcgaa gcggtcaaca tctccgaaaa cctgcgtatc
     1201 caagccatcg aaccgcattt caacgccgaa gcgggcttgg acgaagcggg cgaaatgatg
     1261 ttcgcccacc atcaagacct gatttggttt tatcaattcg ccatcaccct gcaaaaagcg
     1321 cgcggcaaat acgagcccaa ccgtgcgccg caatacgatt acagcatcga attggataaa
     1381 gaagacaacg tatccgtcgt ccgccgcgaa cgcggctcac ccatcgatac gctggtcagc
     1441 gagatgatga ttcttgccaa cagcacttgg gcacaaatgc tccatgacaa cgacctgccc
     1501 ggcctcttcc gcgtccaacc caccggaaaa gtacgcatga gcaccaaatc cgagccgcat
     1561 atcggcatgg gcgtgcagca ttacggctgg tttacctcgc cgctgcgccg cgccgccgac
     1621 tacatcaacc aaaagcagct gatcagcctg atagacgaca ctgccgagcc gctgtatcaa
     1681 aacagcgatg ccgagctttt cgccgcactg cgcgactttg atgccgccta taccgcctac
     1741 gccgatttcc aacggcagat ggaagcctac tggagccttg tgtacctgca acagcaaggt
     1801 acaagcgagc tgaccgcgac catcctcaaa gaagacctcg tccgcatcga aggcctgccg
     1861 ctggtcacgc gcgcgaccgg tattccgttt gacgcgctgc ccaaatcaca ggcattgttc
     1921 aaaatcaccg aattagatgc cgagaagcag tttgtctcgc tcaactacat caaggcagtc
     1981 gcactcgcag gcaaaacggc aggcaatgcc gtctgaagcc cgatacggca aactccggca
     2041 aaaacagaaa cctgaatctc atcattccca cagtcgggaa tccggttttt tgggtttccg
     2101 ttgtttttcc gtttcaatga acttccaagc cgccgttccc gataaatacc cgcaatctaa
     2161 aatcccgtca ttcccacgca gatgggaatc taggtttatc cgcacagaaa ctgatatgcc
     2221 gtcattcccg cgaaagcggg aatccagacc gttcggcttc agttttttgg tttcgggcaa
     2281 cttctgaatc gtcattcccg cgcaggtgga aatataggtc tgtccgcacg ggaacttata
     2341 cgccgtcatt cccgcgaaag cggaaatcca gattcttcgg tacagaaact tatcggataa
     2401 aacggtttct ttagattcta cgtcctagat tcccgcctgc gcgggaatga cggcataggg
     2461 gtttccgttt tcccgataaa tt
//
LOCUS       DBBZXU010000164         2442 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.164, whole genome shotgun sequence.
ACCESSION   DBBZXU010000164 DBBZXU010000000
VERSION     DBBZXU010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2442)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2442)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2442
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.164"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            45..1400
                     /locus_tag="ACJJDE_002025"
     CDS             45..1400
                     /locus_tag="ACJJDE_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SLC45 family MFS transporter"
                     /protein_id="HGG7541885.1"
                     /translation="MSEYTPQTAKQGLPALAKSTIWMLSFGFLGVQTAFTLQSSQMSR
                     IFQTLGADPHSLGWFFILPPLAGMLVQPIVGHYSDRTWKPRLGGRRLPYLLYGTLIAV
                     IVMILMPNSGSFGFGYASLAALSFGALMIALLDVSSNMAMQPFKMMVGDMVNEEQKGY
                     AYGIQSFLANTGAVVAAILPFVFAYIGLANTAEKGVVPQTVVVAFYVGAALLIITSAF
                     TIFKVKEYDPETYARYHGIDVAANQEKANWFELLKTAPKAFWTVTLVQFFCWFAFQYM
                     WTYSAGAIAENVWHTTDASSVGYQEAGNWYGVLAAVQSVAAVICSFVLAKVPNKYHKA
                     GYFGCLALGALGFFSVFFIGNQYALVLSYTLIGIAWAGIITYPLTIVTNALSGKHMGT
                     YLGLFNGSICMPQIVASLLSFVLFPMMGGLQANMFLVGGVVLLLGAFSVFLIKETHGG
                     V"
     gene            1404..2414
                     /locus_tag="ACJJDE_002026"
     CDS             1404..2414
                     /locus_tag="ACJJDE_002026"
                     /EC_number="5.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016857 - racemase and epimerase activity,
                     acting on carbohydrates and derivatives [Evidence IEA];
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldose epimerase family protein"
                     /protein_id="HGG7541886.1"
                     /translation="MSDTPATRDFGLIDGRAVTGYVLSNRRGTRVCVLDLGGIVQEFS
                     VLADGVRENLVVSFDDAASYADNPFQINKQIGRVAGRIRGAAFDINGRTYRVEANEGR
                     NALHGGSHGLAVTRFNAVAADGRSVVLRSRLQQSADGYPNDLDLDISYRLDEDDRLTV
                     SYRATALGDTVFDPTLHIYWRLDAGLHDAVLHIPQGGHIPADAEKLPVSTVSDDLEVF
                     DFSRPKPLDAAVAALRRETGRAGFDDAYRVPSDIGRPAAVLQAGRRRRISIYSDRNGL
                     VIFTAAPQDFARHDAGVYDALATEAQTLPDSLHWPEFGNIRLNKGDTREATIAYGIES
                     LS"
BASE COUNT          453 a          662 c          729 g          598 t
ORIGIN      
        1 ttgttaatct actatacttt tcaaatcaaa aaaggattta ccttatgtcg gaatatacgc
       61 ctcaaacagc aaaacaaggt ttgcccgcgc tggcaaaaag cacgatttgg atgctcagtt
      121 tcggctttct cggcgttcag acggccttta ccctgcaaag ctcgcagatg agccgcatct
      181 tccagacgct cggtgccgat ccgcacagcc tcggctggtt ctttatcctg ccgccgctgg
      241 cggggatgct ggtgcagccg attgtcggcc attactccga ccgcacttgg aagccgcgtt
      301 tgggcggccg ccgtctgccg tatctgcttt atggcacgct gattgcggtt attgtgatga
      361 ttttgatgcc gaactcgggc agcttcggtt tcggctatgc gtcgctggcg gctttgtcgt
      421 tcggcgcgct gatgattgcg ctgttggacg tgtcgtcaaa tatggcgatg cagccgttta
      481 agatgatggt cggcgacatg gtcaacgagg agcagaaagg ctacgcctac gggattcaaa
      541 gtttcttagc aaatacgggc gcggtcgtgg cggcgattct gccgtttgtg tttgcgtata
      601 tcggtttggc gaacaccgcc gagaaaggcg ttgtgccaca aaccgtggtc gtagcattct
      661 atgtgggcgc ggcattactg attattacca gtgcgttcac aatcttcaaa gtcaaagaat
      721 acgacccgga aacctatgcc cgttaccacg gcatcgatgt cgccgcgaat caggaaaaag
      781 ccaactggtt cgaactctta aaaacggcac ctaaagcgtt ttggacggtt actctggtac
      841 agtttttctg ctggttcgcc ttccaatata tgtggactta ctcggcaggc gcgattgcgg
      901 aaaacgtctg gcacaccact gatgcgtctt ccgtaggtta tcaggaggcg ggcaactggt
      961 acggcgtttt ggcggcggtg cagtcggttg cggcggtgat ttgttcgttt gtattggcga
     1021 aagtgccgaa taaataccat aaggcgggtt atttcggctg tttggctttg ggcgcgctcg
     1081 gctttttctc cgttttcttc atcggcaacc aatacgcgct ggtgttgtct tataccttaa
     1141 tcggcatcgc ttgggcgggc attatcactt atccgctgac gattgtaacc aacgccttgt
     1201 cgggcaagca tatgggcact tacttgggcc tgtttaacgg ctctatctgt atgccgcaaa
     1261 tcgtcgcttc gctgttgagt ttcgtgcttt tcccgatgat gggcggtttg caggccaata
     1321 tgttcttggt agggggcgtc gtcctgctgc tgggcgcgtt ttccgtgttc ctgattaaag
     1381 aaacacacgg cggggtttga gcgatgagcg atacccccgc tacccgcgat ttcggtctga
     1441 tcgacgggcg tgccgtaacc ggctatgtgc tgtccaaccg gcgtggtacg cgtgtctgcg
     1501 tgctggactt gggcgggatt gtgcaggaat tttccgtttt ggcagacggc gtgcgcgaaa
     1561 acctcgtggt gtcgttcgat gatgcggctt cctatgcgga caatccgttt cagattaaca
     1621 aacagatagg gcgcgtggcc ggacgcatcc gcggtgcggc gttcgacatc aacggcagga
     1681 cttaccgcgt ggaggccaac gaaggcagga acgcgctgca cggcggttcg cacgggctgg
     1741 ccgttacccg tttcaacgcg gtggcggcag acggccgttc ggtggtgctg cgcagccgcc
     1801 tgcaacagtc ggccgacggt tatcccaacg atttggattt ggatatttcc taccgcttgg
     1861 acgaggacga ccggcttacc gttagctatc gcgccaccgc gctcggcgac acggtgttcg
     1921 acccgacgct gcacatttac tggcggctgg acgcgggcct gcacgatgcg gttctgcata
     1981 ttccgcaggg cggacatatt ccggccgatg ccgaaaaact gcccgtctca acggtttcag
     2041 acgacctcga agtatttgat ttcagccggc ccaagccgct ggatgccgcc gttgccgccc
     2101 tgcgccgcga aacgggtcgg gccggttttg acgacgctta ccgcgtgccg tccgatatag
     2161 gccgtcccgc cgctgtgttg caagccggac gccgccgtcg tatcagcata tacagcgacc
     2221 gcaatggctt ggtcatcttt accgccgccc cgcaggattt cgcgcggcac gatgcgggcg
     2281 tttacgacgc gctggcgacc gaggcgcaga cgctgcccga cagcctgcat tggcccgagt
     2341 tcggcaatat tcgtctgaac aagggtgata ccagggaggc gacgattgct tacggcatcg
     2401 aatccctttc ttaggagctt cctaacaccg gttgcagacg gc
//
LOCUS       DBBZXU010000165         2421 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.165, whole genome shotgun sequence.
ACCESSION   DBBZXU010000165 DBBZXU010000000
VERSION     DBBZXU010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2421)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2421)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2421
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.165"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            290..895
                     /locus_tag="ACJJDE_002027"
     CDS             290..895
                     /locus_tag="ACJJDE_002027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002221065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HGG7541887.1"
                     /translation="MNTDFQNILKQLGKQAQKEAAEKQAAEKNKQKQEQDFDFSQAVG
                     QVSPLKNRQQYYAPPDKPPIKVRPKDNRADEENYFYIGSTYNDPPASFSKNGQGKNDI
                     QRLKNGYYPVVTDVDLHGYTQEEAQKVLNEFIAFTQKRGVCGEIIHGSGLGSKGYKPV
                     LKNMTRNWLMQHPDVLAYAEPREGNDGCVRILLKRKLRQQD"
     gene            958..1320
                     /gene="ssrA"
                     /locus_tag="ACJJDE_002028"
     tmRNA           958..1320
                     /gene="ssrA"
                     /locus_tag="ACJJDE_002028"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(1639..>2421)
                     /locus_tag="ACJJDE_002029"
     CDS             complement(1639..>2421)
                     /locus_tag="ACJJDE_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HGG7541888.1"
                     /translation="RKNATRRRVKAMPSVELLLVIVGLPRGTFYYQLAVQSAEDKYAD
                     LKRHIHDIYRRHKGRYGYRRIAAAIRHAGTPVNHKKVSRLMAKTGLKAVIRRRKYRSF
                     KGEVGKIAPNILRRCFHAEKPNEKWVTDVTEFNVGGEKIYLSPIMDLFNGEIVSYRIQ
                     TRPTFDLADEILKGAPEKPGSSEKPILHSDQGWQYQMFFYSGLNLNQDKAMKPQTVQI
                     VRQGEATPYWFKFNPLYNNDRIKLKLKGLSLVQYRIQSLKAA"
BASE COUNT          689 a          643 c          505 g          584 t
ORIGIN      
        1 tcagatttcc gtgtttcgcg tttccggcaa ttcaagattg gcaaaacacg tcagcctgct
       61 tcgcaaggca ggtttttaaa actttatcag gcgttcgggc atatcggttc gaccggtccg
      121 catttccggc aatcaacact gccgacggtt gccgcatttc tttttgatat acaatcacac
      181 tttcaaaaaa catacgcagg caacaaaatc atcctccccc gattggcaaa cattccggca
      241 aattaaaacc ccgcccgaaa cagccatcgg acaaataaca ggaaaaaata tgaataccga
      301 cttccaaaac atcctcaaac aactgggcaa acaagcccaa aaagaagcgg cagaaaaaca
      361 ggcagccgaa aaaaacaagc aaaaacaaga acaggatttc gatttttcac aagcagtcgg
      421 acaagtctcc ccattaaaaa accggcagca atattatgcg ccgcccgaca aaccccccat
      481 caaagtccgt cccaaagaca accgcgccga cgaagaaaac tacttctaca tcggcagcac
      541 atacaacgac ccgcccgcca gcttcagcaa aaacggacag ggaaaaaacg acatccaacg
      601 cctgaaaaac ggatactatc ccgtcgttac cgatgtcgac ctgcacggct acacacagga
      661 agaagcccaa aaagtcctca acgaattcat cgcattcacc caaaaacgcg gcgtatgcgg
      721 cgaaatcatc cacggcagcg gattaggttc caaaggctac aaacccgttc tgaaaaatat
      781 gacccgaaac tggctgatgc aacaccccga cgtactcgcc tacgccgaac cccgggaagg
      841 caacgacggc tgcgtccgca tcctgctcaa acgcaaatta aggcagcaag actgacaaat
      901 ttctccgaca gacttggcag caccgcacaa tatccgtata atttgcaaac catttctggg
      961 ggcgaccttg gtttcgacgg gggttgcgaa gcagatgcgg gcataccggg gtctcagatt
     1021 cccgtaaaac actgaattca aatagtcgca aacgacgaaa cttacgcttt agccgcttaa
     1081 ggctagccgt tgcagcagtc ggtcaatggg ctgtgtggcg aaagccaccg caacgtcatc
     1141 ttacattgac tggtttccta ccgggttact tggcaggaaa tgagatttaa ggtaactggt
     1201 ttccaaaagg cctgttggtc ggcatgatgg aaataagatt ttcaaataga cacaactaag
     1261 tatgtagaac gctttgtaga ggactttcgg acgggggttc gattcccccc gcctccacca
     1321 taccctattt tcagcagcat cctgcaacac aaaaaagcct tgaacttcaa cagtttcaag
     1381 gcttttttgt tgccttgaat atgctggcgt atgcttgagt tttcgccatt tatggggtaa
     1441 cttttggggt aacttttcac gaattacccc aaaaaacgcc ttaaaaatgc aaaagtcatc
     1501 acgcattttt ttaaaaaggt tacccaaaac ttaaatgtaa tcctttattt ataagcttgc
     1561 agctttccaa acaagttacc cccaaacgga taaaaaaatg ccgaagccga actgacccca
     1621 aaaagtcgga cagtttaatc aagcggcttt cagggactga attctgtact gaacaaggct
     1681 cagccctttt aatttcaact tgattctatc gttgttgtat agtggattaa atttaaacca
     1741 gtacggcgtt gcctcgcctt gccgtactat ttgtactgtc tgcggcttca tcgccttgtc
     1801 ctgatttaaa tttaatccac tataaaaaaa catctgatat tgccaacctt gatccgaatg
     1861 cagtatcggc ttttcagacg atcccggttt ctccggcgca cctttcagta tctcgtcggc
     1921 caaatcgaaa gtcgggcggg tttgaatacg gtaactgacg atttccccgt taaacaaatc
     1981 cataatcgga gaaaggtata tcttttctcc gcctacattg aactcggtaa cgtccgttac
     2041 ccatttctca ttcggctttt ctgcatggaa acagcgtcgc aggatattcg gcgcaatttt
     2101 gccgacttct cctttgaacg agcggtattt gcgccgccgt atcactgcct tcagccccgt
     2161 cttcgccatc agacggctga ctttcttgtg attgaccggt gttcctgcgt gacggatggc
     2221 tgccgcaatc ctccggtagc cgtatcttcc cttatgtcgt cgataaatat catggatatg
     2281 ccgtttcaaa tcggcatatt tgtcttctgc cgattggacg gccaattggt aatagaaggt
     2341 gccgcgtggc agtccgacaa tcaccaacag cagttcaacg gatggcattg ccttaaccct
     2401 gcgacgagtt gcgttctttc t
//
LOCUS       DBBZXU010000166         2417 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.166, whole genome shotgun sequence.
ACCESSION   DBBZXU010000166 DBBZXU010000000
VERSION     DBBZXU010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.166"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            77..2227
                     /gene="yccS"
                     /locus_tag="ACJJDE_002030"
     CDS             77..2227
                     /gene="yccS"
                     /locus_tag="ACJJDE_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YccS family putative transporter"
                     /protein_id="HGG7541889.1"
                     /translation="MKTPLLKPLLITSLPVFASVFTAASIVWQLGEPKLAMPFVLGII
                     AGGLVDLDNRLTGRLKNIIATVALFTLSSLTAQSTLGTGLPFILAMTLMTFGFTILGA
                     VGLKYRTFAFGALAVATYTTLTYTPETYWLTNPFMILCGTVLYSTAIILFQIILPHRP
                     VQESVANAYDALGGYLEAKADFFDPDEAAWIGNRHIDLAMSNTGVITAFNQCRSALFY
                     RLRGKHRHPRTAKMLRYYFAAQDIHERISSAHVDYQEMSEKFKNTDIIFRIHRLLEMQ
                     GQACRNTAQALRASKDYVYSKRLGRAIEGCRQSLRLLYDGNDSPDIRHLRRLLDNLGS
                     VDQQFRQLQHNGLQAENDRMGDTRIAALETGSLKNTWQAIRPQLNLESGVFRHAVRLS
                     LVVAAACTIVEALNLNLGYWILLTALFVCQPNYTATKSRVRQRIAGTVLGVIVGSLVP
                     YFTPSVETKLWIVIASTTLFFMTRTYKYSFSTFFITIQALTSLSLAGLDVYAAMPVRI
                     IDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSNGAYLEKITERLKSGETGDDVE
                     YRATRRRAHEHTAALSSTLSDMSSEPAKFADSLQPGFTLLKTGYALTGYISALGAYRS
                     EMHEECSPDFTAQFHLAAEHTAHIFQHLPETEPDDFQTALDTLRGELDTLRTHSSGTQ
                     SHILLQQLQLIARQLEPYYRAYRQIPHRQPQNAA"
BASE COUNT          575 a          931 c          482 g          429 t
ORIGIN      
        1 agctaaggcg aggcaacgcc gtactggttt ttgttaatcc actatattca cttcataaca
       61 ataaaccggt aaaaccatga aaaccccact cctcaagcct ctgctcatta cctcgcttcc
      121 cgttttcgcc agtgttttta ccgccgcctc catcgtctgg cagctaggcg aacccaagct
      181 cgccatgccc ttcgtactcg gcatcatcgc cggcggcctt gtcgatttgg acaaccgcct
      241 gaccggacgg ctgaaaaaca tcatcgccac cgtcgccctg tttaccctct cctcgctcac
      301 ggcacaaagc accctcggca cagggctgcc cttcatcctc gccatgaccc tgatgacctt
      361 cggctttacc attttaggcg cggtcgggct gaaataccgc accttcgcct tcggcgcact
      421 cgccgtcgcc acctacacca cacttaccta cacccccgaa acctactggc tgaccaaccc
      481 cttcatgatt ttatgcggca ccgtactgta cagcaccgcc atcatcctgt tccaaatcat
      541 cctgccccac cgccccgtcc aagaaagcgt cgccaacgcc tacgacgcac tcggcggcta
      601 cctcgaagcc aaagccgact tcttcgaccc cgatgaggca gcctggatag gcaaccgcca
      661 catcgacctc gccatgagca acaccggcgt catcaccgcc ttcaaccaat gccgttccgc
      721 cctgttttac cgtttgcgcg gcaaacaccg ccacccgcgc accgccaaaa tgctgcgcta
      781 ctacttcgcc gcccaagaca tccacgaacg catcagctcc gcccacgtcg actaccaaga
      841 gatgtccgaa aaattcaaaa acaccgacat catcttccgc atccaccgcc tgctcgaaat
      901 gcagggacaa gcctgccgca ataccgccca agccctgcgc gcaagcaaag actacgttta
      961 cagcaaacgc ctcggccgcg ccatcgaagg ctgccgccaa tcgctgcgtc tcctttacga
     1021 cggcaacgac agccccgaca tccgccacct gcgccgtctt ctcgacaacc tcggcagcgt
     1081 cgaccaacaa ttccgccaac tccagcacaa cggcctgcag gcagaaaacg accgcatggg
     1141 cgacacccgc atcgccgccc tcgaaaccgg cagcctcaaa aacacctggc aggcaatccg
     1201 tccgcagcta aacctcgaat caggcgtatt ccgccatgcc gtccgcctgt cccttgtcgt
     1261 tgccgccgcc tgcaccatcg tcgaagccct caacctcaac ctcggctact ggatactact
     1321 gaccgccctt ttcgtctgcc aacccaacta caccgccacc aaaagccgcg tccgccagcg
     1381 catcgccggc accgtactcg gcgtaatcgt cggctcgctc gtcccctact tcaccccgtc
     1441 tgtcgaaacc aaactctgga ttgtcatcgc cagtaccacc ctctttttca tgacccgcac
     1501 ctacaaatac agtttctcca ccttcttcat taccattcaa gccctgacca gcctctccct
     1561 cgcaggtttg gacgtatacg ccgccatgcc cgtacgcatc atcgacacca ttatcggcgc
     1621 atcccttgcc tgggcggcag tcagctacct gtggccagac tggaaatacc tcacgctcga
     1681 acgcaccgcc gcccttgccg tatgcagcaa cggtgcctat ctcgaaaaaa tcaccgaacg
     1741 cctcaaaagc ggcgaaaccg gcgacgacgt cgaataccgc gccacccgcc gccgcgccca
     1801 cgaacacacc gccgccctca gcagcaccct ttccgacatg agcagcgaac ccgcaaaatt
     1861 cgccgacagc ctgcaacccg gctttaccct gctcaaaacc ggctacgccc tgaccggcta
     1921 catctccgcc ctcggcgcat accgcagcga aatgcacgaa gaatgcagcc ccgactttac
     1981 cgcacagttc cacctcgccg ccgaacacac cgcccacatc ttccaacacc tgcccgaaac
     2041 cgaacccgac gactttcaga cggcattgga tacactgcgt ggcgaactcg acaccctccg
     2101 cacccacagt agcggaacac aaagccacat cctcctccaa cagctccaac tcatcgcccg
     2161 acagctcgaa ccctactacc gcgcctaccg ccaaattccg cacaggcagc cccaaaacgc
     2221 cgcctgaaaa agtttcggca ttttgtaaga gagagcagat tgtcagacag gttgcaagat
     2281 agtggataaa gctttgcgca gggtaaatgc gtagcaactg aaccgtcatt cccacgaatc
     2341 tacattccgt cattcccacg aaaacagaaa accaaaaaca gaaacctaaa atcccgtcat
     2401 tcccacgaac ctgcatc
//
LOCUS       DBBZXU010000167         2393 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.167, whole genome shotgun sequence.
ACCESSION   DBBZXU010000167 DBBZXU010000000
VERSION     DBBZXU010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2393)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2393)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2393
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.167"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            42..413
                     /locus_tag="ACJJDE_002031"
     CDS             42..413
                     /locus_tag="ACJJDE_002031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2628 domain-containing protein"
                     /protein_id="HGG7541890.1"
                     /translation="MKPYKIYTHPALPPQAVKQGWSWPGLLFGTLWACFKRMWGLGLG
                     LTGAIFVLAVFAQLVYGDTPATDSAFNVLGLAVSVWFGAKGNSLYARHLLSRGYTELP
                     ETVQAANPQAALAQYFGRGGR"
     gene            568..1116
                     /locus_tag="ACJJDE_002032"
     CDS             568..1116
                     /locus_tag="ACJJDE_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002236926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HGG7541891.1"
                     /translation="MARLTVHTLETAPEAAKARVEAVLQNNGFIPNLIGVLSNAPEAL
                     AFYQEVGKLNAANSLTAGEVEVIQIIAARTNQCGFCVAGHTKLATLKKLLSEQSVKAA
                     RALAAGEFDDAKLGALAAFTQAVMAKKGAVSDEELKAFFDAGYNQQQAVEVVMGVALA
                     TLCNYVNNLGQTEINPELQAYA"
     gene            1246..2337
                     /locus_tag="ACJJDE_002033"
                     /pseudo
     CDS             1246..2337
                     /locus_tag="ACJJDE_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003751739.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
BASE COUNT          616 a          754 c          603 g          420 t
ORIGIN      
        1 accttcccaa agggcagggt ttcaaccgaa aaggaaacac gatgaaacca tacaaaatct
       61 acacccatcc cgccctgccg ccccaagccg tcaaacaagg ctggtcatgg ccggggctct
      121 tgttcggcac gctgtgggcg tgtttcaaaa gaatgtgggg tttggggctg gggctgacgg
      181 gcgcgatatt cgtgctggct gtgtttgccc aactggttta cggcgacacg cccgccacag
      241 actcggcgtt taacgtattg ggcttggcgg tttccgtctg gttcggcgca aagggcaaca
      301 gcctttatgc acgccacctt ttatcgcgcg gctataccga attgcccgaa acagtccaag
      361 ctgccaaccc ccaagccgca ttggcgcaat atttcgggcg cgggggccga taagcgcgtt
      421 ttcttttcca tcatgccgtc tgaaaaatgt tcagacggca tttcttataa cctttcgttt
      481 gcagcacata accaatcagt ctttcctatt ccgttccgaa atgcatacca tgcgcccgta
      541 cccaatattt gcgaacaagg aaagaaaatg gcacgtttaa ccgtacacac cctcgaaacc
      601 gcccccgaag ccgccaaagc gcgcgtcgag gcggtacttc aaaacaacgg ctttatcccc
      661 aaccttatcg gcgtattatc aaacgccccc gaagccttgg cgttttacca agaagtcggc
      721 aagctcaacg ccgccaacag cctgaccgcc ggcgaagtcg aagtaatcca gattattgcc
      781 gcccgcacca accaatgcgg cttctgcgtg gcagggcaca ccaaactcgc aaccctgaaa
      841 aaactccttt ccgaacaatc cgtcaaagcc gcgcgcgctt tggcggcagg cgaatttgac
      901 gatgctaaac tcggcgcgct cgccgccttt acccaagccg taatggcaaa aaaaggcgcg
      961 gtatccgacg aggaactcaa agcatttttt gatgcgggct acaaccagca gcaggcagtc
     1021 gaagtcgtga tgggcgtagc cttggcaact ttgtgcaact acgtcaacaa cctcggacaa
     1081 accgaaatca accccgaatt gcaggcttac gcctgatacg gcaaaccgcc cgaatatcgg
     1141 gcggtttttc aacccccctc aaacaaaaac aagccgccaa acggcaggga agcagccgcg
     1201 catcaggcgt gcgcccgatt cccccgcaaa ccttaaggaa caaagatgaa cgcccaaacc
     1261 ctgattgcca acgttgccga actcgtcaaa accaagctca aacccatagt ggacgacatc
     1321 gaccgcaaag gatactaccc cgaagcattt atgcgcgaac tcggcgcaat cggcggattc
     1381 ggcgcagtcg gtacagaagc cgaaggcggc aacggcttgg gtttggcaac gcaaatcgcc
     1441 gtcttgcgcg aaatcggcaa agaatgcggc gcaacctcct tcagcgcgtg gtgtcaggcg
     1501 gcttgcgcgt ggtatctgca ccaaacgccc aaccaagccg tcaaagacaa atacctcgcc
     1561 gacatcctgc aaggcaaagt attggcgggt acgggcatgt ccaataccgt caaacacctt
     1621 gccggcatcg aaaaacacaa cctccaagct gagcgagtgg agggcggcta cacagtcaac
     1681 ggcgcgctgc cgtgggtgtc caacatcggc gaagaccaca tctaggcgaa taccgcccaa
     1741 atcggcgacg gttacgttat gtttatcacc ggcggacaat gggaaggcgt aagcctgcaa
     1801 aactgccccg aattttgcgc cctcgaaggc acgcgcacct tcagcctgaa cttcaaagac
     1861 gtatttatcc ccgacgaaga catcatcgcc gcgcccgaac agtttgccga ctacatccaa
     1921 agcatcaaag caggctttat cctcctgcaa atcggcatcg gcgcgggcgt gatagacggc
     1981 agcctcggca tcatccgcct cgccaacatc gtcaatgcag aagtcaacag ctatctcgac
     2041 gacggctacg acagcctcaa agcaaggttg gacggcgcgt gggcagaaac cgaacggctc
     2101 gccggcttgg cttggagcgg cacgcccgac aaccttgcta ccctcaagct gcgcgaagcc
     2161 gccgccgtac tggcacttgc cgccgcccaa tccgccgcac tgcattccgg cgcaaaaggc
     2221 tacctgatgc gcagtcccgc ccaaaggcgc gtccgcgaag cgatgtttgt cgccatcgta
     2281 acccccgcaa tcaaacacct acgcaaagaa atagcggcaa tcgaagccgc aaaataaaca
     2341 ggcggaaaaa accgaaaccc ccaccgcgtc attcccgcga aagcgggaat cca
//
LOCUS       DBBZXU010000168         2326 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.168, whole genome shotgun sequence.
ACCESSION   DBBZXU010000168 DBBZXU010000000
VERSION     DBBZXU010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2326
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.168"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            299..733
                     /locus_tag="ACJJDE_002034"
     CDS             299..733
                     /locus_tag="ACJJDE_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541892.1"
                     /translation="MDNKKEFINNLTNRYMWIYPLVLNILFLPFYQSYQSFFIALGCL
                     FALVRKMQSLDFKLQNHIVLLNIKSAWADKKVFLIRIVVSWLAVMEIWMCFISESSTW
                     VCGAFCLNSEILEKIFRGFGYSGSLYFLFILMIDLNKLRESI"
     gene            1009..1728
                     /locus_tag="ACJJDE_002035"
     CDS             1009..1728
                     /locus_tag="ACJJDE_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541893.1"
                     /translation="MKNKNYLLVFIVLHIALIVINIVFGYFVFLFDFFAFLFFANVFL
                     AVNLLFLEKNIKNKLLFLLPISIIIWMVIHISMINIKFYKFEHQIKEQNISSITGVIK
                     PHDSYNYVYDSNGYAKLKDNHRYGRVIRETPYIDVVASDVKNKSIRLSLVCGIHSYAP
                     CANFIKFAKKPVKIYFYNQPQGDFIDNVIFEINDGNKSLYLLDKYKTFFLIENSVCIV
                     LIILYLKFNLLLYRTYFNELE"
     gene            1715..>2326
                     /locus_tag="ACJJDE_002036"
     CDS             1715..>2326
                     /locus_tag="ACJJDE_002036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002243615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541894.1"
                     /translation="MSWNSFGNFMSARSSALAEFGNMVANLVSAKNEKDISKRNEYYK
                     QAGYSALLAFGNLASNIAPGSTSSHIVNGTNASVIASRLSGNISSAIQEHKDGKVNIN
                     RFQNILADLYSLGGLGSTLIEKNGNMQSWGIPLAIAGDIIAATAIATGDTGTISTEEF
                     YNFDNWKGFGYELFEDWSRWVYDWLPDGWNLWKELDRNRSGQYH"
BASE COUNT          798 a          284 c          420 g          824 t
ORIGIN      
        1 caaacaaaaa agagaaattt taatttcgct aaatcgcata aagattaatc aagagtatca
       61 ttaaatgata tgagtgagca tctataatgc caagaagagt tgttaagaca taacgattat
      121 tgaaatagat tgtaaaatag atacttagat agtctgaaaa acggatttgt gaaacttttt
      181 attacgcgcc atcatttgaa aatgaaactt aaaaaacact tatcataata aatattttct
      241 ttacgttgtt tgctaataaa ctcagtgcaa tatcagcgca atattttatg gaaattttat
      301 ggataacaaa aaagaattta ttaataattt aacaaatagg tatatgtgga tctatccatt
      361 ggtcttaaat attctatttc taccttttta ccagtcctac caatcttttt ttattgcgct
      421 tggttgtttg tttgcactgg ttagaaaaat gcaaagctta gattttaaat tacaaaatca
      481 tattgtattg ttaaatataa aaagtgcttg ggcagataaa aaagtatttt tgattaggat
      541 agtagtgtca tggttggcag taatggaaat atggatgtgt tttatttcgg aatcatcaac
      601 gtgggtatgc ggtgcttttt gtttaaatag tgaaatattg gaaaaaattt ttcgtggctt
      661 tggttattct ggtagtttat attttttatt tatattgatg attgatctca ataagttaag
      721 agagagtatt tgaatttcat tttttgtttg acttaaactc aaggagagta acaatgattg
      781 gtagtggtga tactaaacaa tgcaaaaaat tttctgcgtg tgatggaaaa taccacgtct
      841 acgatcccct cgccctagac ttggacggcg acggcataga aacagtcacc gccaaaggct
      901 tttcaggcag cctgaagact gagagagtga atacgatgag tatacactct atgccactaa
      961 attgatattc actaaatcat accagctata ttttatttaa tgagacatat gaaaaataaa
     1021 aattatttac tagtatttat agttttacat atagccttga tagtaattaa tatagtgttt
     1081 ggttattttg tttttctatt tgattttttt gcgtttttgt tttttgcaaa cgtctttctt
     1141 gctgtaaatt tattattttt agaaaaaaac ataaaaaaca aattattgtt tttattgccg
     1201 atttctatta ttatatggat ggtaattcat attagtatga taaatataaa attttataaa
     1261 tttgagcatc aaataaagga acaaaatata tcctcgatta ctggggtgat aaaaccacat
     1321 gatagttata attatgttta tgactcaaat ggatatgcta aattaaaaga taatcataga
     1381 tatggtaggg taattagaga aacaccttat attgatgtag ttgcatctga tgttaaaaat
     1441 aaatccataa gattaagctt ggtttgtggt attcattcat atgctccatg tgccaatttt
     1501 ataaaatttg caaaaaaacc tgttaaaatt tatttttata atcaacctca aggagatttt
     1561 atagataatg taatatttga aattaatgat ggaaacaaaa gtttgtactt gttagataag
     1621 tataaaacat tttttcttat tgaaaacagt gtttgtatcg tattaattat tttatattta
     1681 aaatttaatt tgcttttata taggacttac ttcaatgagt tggaatagtt ttggtaattt
     1741 tatgagcgca cgctcatccg cgttagcaga atttggaaat atggttgcta atttagtttc
     1801 tgcaaaaaat gagaaagata tctcgaaacg taatgaatat tacaaacaag ctggttatag
     1861 tgcattatta gcatttggta atttggctag taatattgca ccaggtagta cgtcatcgca
     1921 tattgtaaac ggaacaaatg cctctgtgat tgcaagccgt ctctctggaa atatatcttc
     1981 agctattcag gagcataaag atggtaaagt taatatcaac cgttttcaaa atattttagc
     2041 ggatttatat tcattgggag ggttaggaag tacattaata gagaagaatg gaaatatgca
     2101 gagttggggg attccattag caattgctgg agatataatt gcagcaacgg ctattgccac
     2161 aggagatact ggtacgatat ctacagagga attttataat tttgacaact ggaaaggttt
     2221 tgggtatgag ctatttgaag actggtctcg ttgggtatac gactggctgc ccgacggctg
     2281 gaatctgtgg aaagaattgg acagaaaccg ttcaggccaa taccac
//
LOCUS       DBBZXU010000169         2313 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.169, whole genome shotgun sequence.
ACCESSION   DBBZXU010000169 DBBZXU010000000
VERSION     DBBZXU010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.169"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1955
                     /gene="pilC"
                     /locus_tag="ACJJDE_002037"
     CDS             <1..1955
                     /gene="pilC"
                     /locus_tag="ACJJDE_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PilC family type IV pilus tip adhesin"
                     /protein_id="HGG7541895.1"
                     /translation="DTSKPGRYSLKPLSMSEIKSKEPNFTGRQTVIRLDSGVQQIKLQ
                     GNEVANFNGNDGKNDTFGIVSEGSFMPDTSEWKKVLLPWTVRASNDDGQFNTFNKEEN
                     NGKPKYSQKYRSRDSSKHERNLGDIVNSPIVAVGGYLATSANDGMVHIFKKGNGVDER
                     NYSLKLSYIPGTMPRQYFDNDTSALKDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQV
                     EWKGQNRVFMFGAMGLGGRGAYALDLTKAENGDPTAVSLFDVKNDKNKGNNSAELGYT
                     VGTPQIGKTHDGKYAAFLASGYATKTIDSTDNKTALYVYDLESSGTLIKKIDVPGGKG
                     GLSSPTLVDKDLDGTVDIAYAGDRGGSMYRFDLKDWSVRTIFSGNKPITSAPAISQLK
                     DKRVVIFGTGSDLSEEDVLNTDEQYIYGIFDDDTAASNVDVKLKGLGGGLLEQVLEQK
                     DKTLFLTDYKRSDGSGNKGWVVKLKDGQRVTVKPTVVLRTAFVTIHKYTGNDKCGAET
                     AILGINTADGGKLTKKSARPIVPDANKDVAQYSGHKKGTNGKSIPIGCMEKNGGTVCP
                     NGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGIDPAGKRAGKNNRCFSQKGVRTLL
                     MNDLDSLDITGPTCGMKRISWREVFF"
BASE COUNT          644 a          570 c          618 g          481 t
ORIGIN      
        1 atgacacaag caaaccgggc cgctattccc tcaaaccctt gagtatgtcg gagattaaaa
       61 gtaaagagcc gaatttcaca gggcggcaaa ccgtcatccg attggatagc ggcgtacagc
      121 agatcaaact tcaaggcaat gaggtcgcca attttaatgg aaatgacggc aaaaacgaca
      181 ctttcggcat tgttagtgaa gggagcttca tgcctgatac cagcgagtgg aaaaaagtat
      241 tgctgccttg gacggttcgt gcttccaatg atgacggtca atttaacaca ttcaacaaag
      301 aagaaaacaa cggcaagcca aaatacagtc aaaaataccg cagccgcgac agcagcaagc
      361 acgagcgcaa tttgggcgac atcgtcaaca gccccatcgt ggcggtcggc gggtatttgg
      421 ctacttccgc caacgacggg atggtgcata tcttcaaaaa aggcaacggc gtggacgagc
      481 gcaactatag tctgaagctc agttatatcc ccggcacgat gccgcgccaa tattttgata
      541 acgacacttc cgctctcaaa gactccaccc tcgccaaaga gctgcgcgcc tttgccgaaa
      601 aaggctatgt gggcgaccgc tacggcgtgg acggcggctt tgtcttacgc caagtcgaat
      661 ggaaagggca aaaccgcgtg tttatgttcg gcgcgatggg ccttggcggc agaggtgcgt
      721 atgccttgga tttgaccaaa gccgaaaacg gtgacccgac cgccgtttcc ctgtttgatg
      781 tcaaaaatga caaaaataaa ggcaataata gtgcagaatt aggctacacc gtcggcacgc
      841 cgcaaatcgg caaaacccac gacggcaaat acgccgcttt cctcgcctcc ggttatgcga
      901 ctaaaaccat tgacagcaca gacaataaaa ccgcgctgta tgtgtatgat ttggaaagca
      961 gcggtacgct gattaaaaaa atcgatgtac ccggcggcaa gggcgggctt tcgtccccca
     1021 cgctggtgga taaagatttg gacggcacgg tcgatatcgc ctatgccggc gatcgcggcg
     1081 gcagtatgta ccgctttgat ttgaaagact ggtctgtacg caccattttc agcggcaaca
     1141 aaccgattac ttccgcgccc gctatttccc aactgaaaga caaacgcgtg gttatcttcg
     1201 gcacgggcag cgatttgagt gaggaggatg tactcaatac ggacgaacaa tatatttacg
     1261 gtatctttga cgacgatacg gcggcgagta atgtagatgt aaaactcaaa ggtttgggag
     1321 gcgggttgct cgagcaggtg cttgagcaga aggataaaac cttattcctg accgattata
     1381 agcgatccga cggctcgggc aataagggct gggtagtgaa attgaaggac ggacagcgcg
     1441 ttaccgtcaa accgaccgtg gtattgcgta ccgcctttgt aaccatccat aaatatacgg
     1501 gtaatgacaa atgcggcgcg gaaaccgcca ttttgggcat caataccgcc gacggcggca
     1561 agctgacgaa gaaaagcgcg cgcccgattg tgccggacgc caataaggat gtcgcgcaat
     1621 attccggtca taagaaaggc accaacggca aatccatccc tataggttgt atggaaaaaa
     1681 acgggggaac cgtctgcccg aacggatatg tttacgacaa accggttaat gtgcgttatc
     1741 tggatgaaaa gaaaacagac ggattttcaa caacggcaga cggtgatgcg ggcggcagcg
     1801 gtatagaccc cgccggcaag cgtgccggca aaaacaaccg ctgcttctcc caaaaagggg
     1861 tgcgcaccct gctgatgaac gatttggaca gcttggacat taccggcccg acgtgcggta
     1921 tgaaacgaat cagctggcgc gaagtcttct tctgatttgc acgcgaaaat gccgtccgaa
     1981 aggttttcgg acggcatttt ttgcgttttt cgggaggggc gggttcgtaa aaggcgggct
     2041 atagggtagg cttcatctcg ccaatctcac tgaatccatc aatttccaca attcaattaa
     2101 ataccgtcaa accgatgccg tcattcccgc gcaggcggga atctagacct tagaacaaca
     2161 gcaatattca aaggttagct gaagctttag agattctgga ttcccacttt cgtgggaatg
     2221 acgggatttg agattgcgac atttatcggg agcaacagaa accgctctgc cgtcattccc
     2281 gcgcaggcgg gaatctagac cttagaacaa cag
//
LOCUS       DBBZXU010000170         2313 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.170, whole genome shotgun sequence.
ACCESSION   DBBZXU010000170 DBBZXU010000000
VERSION     DBBZXU010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2313
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.170"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(61..1470)
                     /gene="dacB"
                     /locus_tag="ACJJDE_002038"
     CDS             complement(61..1470)
                     /gene="dacB"
                     /locus_tag="ACJJDE_002038"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HGG7541896.1"
                     /translation="MNFPKTAASLLLLLASLAAHALDTGRIPQNEIAVYVQELDSGKV
                     IIDHRSDVPVNPASTMKLVTAFAAFKTFGSNYRWATEFKSNGTVNDGTLDGNLYWAGS
                     GDPVFNQENLLAVQRQLREQGIRNITGHLMLDHSLWGEVGSPDDFEADSGSPFMTPPN
                     PTMLSAGMVMVRAERNAADSTDILTDPPLSHIFAQNNLKITASQAACPSIKKLMRASF
                     SDNTLKLRGNIPESCLGKPVGVRMFALDELIRQSFTNHWLLGGGRISDGIGIADTPEG
                     AQTLAVAHAKPMKEILTDMNKRSDNLIARSVFLKLGGNGKLPAVSEQAASAVRRELAV
                     SGIDVADLVLENGSGLSRKERVTARMMAQMLETAYFSPFAQDFIDTLPIAGTDGTLRN
                     RFKQSGGLLRLKTGTLNNVRALAGYWLGDKPMAVVVIINSGRAVSLLPDLDNFVANNI
                     ISGGDGWLDAKLMCKERRA"
     gene            1635..2201
                     /locus_tag="ACJJDE_002039"
     CDS             1635..2201
                     /locus_tag="ACJJDE_002039"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003687372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HGG7541897.1"
                     /translation="MAKKISILVGSLRRASFARKVALNAAEMFPEGWQAEIVEIGHLP
                     LYNFDYDDPAVEDVPLPESYTAFRETIKASDGILFVTSENNRTIPACLKNAVDIGSKP
                     NADVAWKNKPAGIISHSVGKMGGYSSQKNLRLALSYFDMPVTGQPEVFLGNSPTLFDE
                     NGKLIDSARDFVQSYINQFVGLIERNAK"
BASE COUNT          532 a          564 c          659 g          558 t
ORIGIN      
        1 caagtttgtc ctagttatct aggacagccc cttaaattta atccactata ttttcctgtt
       61 tcaggctcgg cgttctttgc acatcagttt cgcatccagc cagccatcgc cgccggagat
      121 gatgttgttg gcaacgaagt tgtccaagtc tggcagcagg gaaacggcgc ggccgctgtt
      181 gatgatgacg accaccgcca tcggtttgtc gcccagccaa taacctgcaa gggcgcggac
      241 attgttgagc gtgccggttt ttaagcgcaa cagcccgccg ctttgtttga agcggttgcg
      301 taaagtcccg tctgtgccgg cgatgggcag cgtatcgatg aaatcttgtg caaacgggct
      361 gaaataagcc gtttccaaca tttgcgccat cattctcgcc gttacccttt cttttctgga
      421 cagacctgaa ccgttttcca aaaccaaatc cgcaacatcg atgcccgaca cggcaagttc
      481 acgccggacg gcagacgctg cctgttcgga aacggcgggc agtttgccgt tgccgccgag
      541 tttgaggaag acggaacgcg caattagatt gtccgaacgc ttgttcatgt ccgtcaaaat
      601 ttccttcatc ggtttggcgt gtgcaacggc aagcgtctgc gcgccttccg gcgtgtcggc
      661 tatgccgata ccgtctgaaa tccgtccgcc gccgagcagc cagtggttgg taaaactttg
      721 ccggatcagt tcgtcaagcg cgaacatccg gacaccgaca ggcttgccca aacagctctc
      781 gggaatattg ccgcgcaatt tcagcgtatt gtccgaaaaa gatgcacgca tcagtttttt
      841 gatcgaaggg caggcagctt gggaggcggt aattttcaag ttgttttggg cgaaaatatg
      901 cgacaaaggc ggatcggtga ggatgtcggt actgtcggcg gcattgcgtt cggcgcgcac
      961 cataaccata ccggcagaca gcatagttgg attggggggc gtcataaacg gcgaaccgct
     1021 gtcggcttcg aaatcgtcgg ggctgccgac ttcgccccac aggctgtggt cgagcatcag
     1081 gtgtcccgtg atattgcgta tgccttgttc gcgcaactgg cgttggacgg caagcaggtt
     1141 ttcctgattg aaaacggggt cgccgctgcc cgcccaatac aggtttccgt caagcgtgcc
     1201 gtcgtttacc gtaccgttgc ttttaaactc ggtcgcccag cggtaattgc tgccgaaggt
     1261 tttgaaggcg gcaaacgcgg taacgagttt cattgtggag gcggggttga cggggacatc
     1321 cgagcggtgg tcaatgatga cttttccgct gtcaagctct tggacatata cggcgatttc
     1381 gttttgcgga atgcgacccg tatcgagcgc gtgtgcggcg agggaggcga gaagcagcag
     1441 cagggaggcc gctgttttgg ggaaattcat aggtaaatct gttacataaa aaaagcaatt
     1501 ataaggcaaa gccggataag tgggaacgct gtggcggcgg gccggcttgt ttgcagggga
     1561 aatcacatat ataataatcg ctatcattat gaaatgattg agacgcacaa acttaatatt
     1621 caggaggaat gattatggct aagaaaatca gtattttggt gggcagcctg cgccgtgctt
     1681 cttttgcgcg caaagtggca ttgaatgcgg cggagatgtt ccccgaaggc tggcaggcgg
     1741 aaatcgtcga aatcggacat ctgccgcttt acaatttcga ttatgacgac cctgcggtgg
     1801 aagatgtgcc gctgcccgaa agctacacgg ctttccgcga aacgattaag gcttcggacg
     1861 gcattttgtt cgttacgtcc gaaaataacc gcaccattcc cgcctgtttg aaaaatgcgg
     1921 tggacatcgg ttctaaaccg aatgccgatg tggcttggaa aaacaaaccg gccggcatca
     1981 tcagccattc cgtcggcaag atggggggat acagttcgca aaaaaacctg cgccttgcgc
     2041 tgtcttattt cgatatgccc gtaaccggac agccggaagt gtttttgggc aattcgccga
     2101 cactgtttga tgaaaacggc aaattgattg actcggcaag ggattttgtt cagtcatata
     2161 ttaatcagtt tgtcggtttg attgaaagaa atgccaaata aacaaaccaa gtcgaaaagc
     2221 cgcaaaaccg gttcgggttt tgcggctttt ttatatgggc tgggcagcgt caaggtttgc
     2281 cgtttgccgg ataatgcgcg gcaaatgacc ggc
//
LOCUS       DBBZXU010000171         2297 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.171, whole genome shotgun sequence.
ACCESSION   DBBZXU010000171 DBBZXU010000000
VERSION     DBBZXU010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2297)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2297)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2297
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.171"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            90..2234
                     /gene="fetA"
                     /locus_tag="ACJJDE_002040"
                     /gene_synonym="frpB"
     CDS             90..2234
                     /gene="fetA"
                     /locus_tag="ACJJDE_002040"
                     /gene_synonym="frpB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_021438799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent siderophore receptor FetA/FrpB"
                     /protein_id="HGG7541898.1"
                     /translation="MNTPLFRLSLLSLTLAAGFAHAAENNAKVVLDTVTVKGDRQGSK
                     IRTNIVTLQQKDESTATDMRELLKEEPSIDFGGGNGTSQFLTLRGMGQNSVDIKVDNA
                     YSDSQILYHQGRFIVDPALVKVVSVQKGAGSASAGIGATNGAIIAKTVDAQDLLKGLD
                     KNWGVRLNSGFASNEGVSYGASVFGKEGNFDGLFSYNRNNEKDYEAGKGFRNNFNGGK
                     TVPYSALDKRSYLAKIGTTFGDGDHRIVLSHMKDQHRGIRTVREEFTVGSEDSRINIK
                     RQAPAYRETTQSNTNLAYTGKNLGFVEKLDANAYVLEKERYSADDSGTGYAGNVKGPN
                     HTRITTRGANFNFDSRLAEQTLLKYGINYRHQEIKPQAFLNSQFKIEDKEKATDEEKN
                     KNRENEKIAKAYRLTNPTKTDAGAYIEAIHEIDGFTLTGGLRYDRFKVKTHDGKTVSS
                     SNLNPSFGVIWQPHEHWSFSASHNYASRSPRLYDALQTHGKRGIISIADGTKAERARN
                     TEIGFNYNDGTFAANGSYFWQTIKDALANPQNRHDSVAVREAVNAGYIKNHGYELGAS
                     YRTGGLTAKVGVSHSKPRFYDTHKDKLLSANPEFGAQVGRTWTASLAYRFQNPNLEIG
                     WRGRYVQKAVGSILVAGQKDRNGKLENVVRKGFGVNDIFANWKPLGKDTLNVNLSVNN
                     VFNTFYYPHSQRWTNTLPGVGRDVRLGVNYKF"
BASE COUNT          661 a          663 c          533 g          440 t
ORIGIN      
        1 ataaaaataa ttattaatta tttttcttat cctgccaaat cttaacggtt tggcttaact
       61 tcccttcata cactcaagag gacgattgaa tgaatacccc attgttccgt ctcagcctgc
      121 tctcgcttac cctagcggca ggttttgccc atgcggcaga aaataatgcc aaggtcgtac
      181 tggataccgt taccgtaaaa ggcgaccgcc aaggcagcaa aatccgtacc aacatcgtta
      241 cgcttcaaca aaaagacgaa agcaccgcaa ccgatatgcg cgaactctta aaagaagagc
      301 catccatcga tttcggcggc ggcaacggca cgtcccaatt cctgacgctg cgcggcatgg
      361 gtcagaactc tgtcgacatc aaggtggaca acgcctattc cgacagccaa atcctttacc
      421 accaaggcag atttattgtc gatcccgctt tggttaaagt cgtttccgta caaaaaggcg
      481 cgggttctgc ctctgccggt atcggcgcaa ccaacggcgc gattatcgcc aaaaccgtcg
      541 atgcccaaga cctgctcaaa ggcttggata aaaactgggg cgtgcgcctc aacagcggct
      601 tcgccagcaa cgaaggcgta agctacggcg caagcgtatt cggaaaagag ggcaacttcg
      661 acggcttgtt ctcttacaac cgcaacaatg aaaaagatta cgaagcaggt aaaggcttcc
      721 gtaataattt caacggcggc aaaaccgtac cgtacagcgc gctggacaaa cgcagctacc
      781 tcgccaaaat cggaacaacc ttcggcgacg gcgaccaccg catcgtgttg agccatatga
      841 aagaccaaca ccgaggcatc cgcactgtgc gtgaagaatt taccgtcggc agcgaagatt
      901 cacggataaa tattaaacgc caagcccctg cttaccgcga aaccacacaa tccaacacca
      961 atttggcgta cacgggtaaa aacctgggct ttgtcgaaaa actggatgcc aacgcctatg
     1021 tgttggaaaa agaacgctat tccgccgatg acagcggcac cggctacgca ggcaatgtaa
     1081 aaggccccaa ccatacccga atcaccactc gtggtgcgaa cttcaacttc gacagccgcc
     1141 ttgccgaaca aaccctgctg aaatacggta tcaactaccg ccatcaggaa atcaaaccgc
     1201 aagcgttttt gaattcacaa tttaaaattg aagataaaga aaaagcaact gatgaagaga
     1261 aaaataagaa ccgtgaaaat gaaaaaattg ccaaagccta ccgtctgacc aacccgacca
     1321 aaaccgatgc cggcgcgtat atcgaagcca ttcacgagat tgacggcttt accctgaccg
     1381 gcgggctgcg ttacgaccgc ttcaaggtga aaacccacga cggcaaaacc gtttcaagca
     1441 gcaaccttaa cccgagtttc ggcgtgattt ggcagccgca cgaacactgg agcttcagcg
     1501 caagccacaa ctacgccagc cgcagcccgc gcctgtatga cgcgctgcaa acccacggca
     1561 aacgcggcat catctcgatt gccgacggca ccaaagccga acgcgcgcgc aataccgaaa
     1621 tcggcttcaa ctacaacgac ggcacgtttg ccgccaacgg cagctacttc tggcagacca
     1681 tcaaagacgc gcttgccaat ccgcaaaacc gccacgactc tgtcgccgtc cgtgaagccg
     1741 tcaacgccgg ctacatcaaa aaccacggtt acgaattggg cgcgtcctac cgcaccggcg
     1801 gcttgactgc caaagtcggc gtaagccaca gcaaaccgcg cttttacgat acgcacaaag
     1861 acaagctgtt gagcgcgaat cctgaatttg gcgcacaagt cggccgcact tggacggctt
     1921 cccttgccta ccgcttccaa aacccgaatc tggaaatcgg ctggcgcggc cgttatgttc
     1981 aaaaagccgt gggttcgata ttggtggcag gtcaaaaaga ccgcaacggc aaattggaaa
     2041 acgttgtacg caaaggtttc ggtgtgaacg acatcttcgc caactggaaa ccgctgggca
     2101 aagacacgct caatgttaat ctttcggtta acaacgtgtt caacacgttc tactatccgc
     2161 acagccaacg ctggaccaat accctgccgg gcgtgggacg tgatgtacgc ttgggcgtga
     2221 actacaagtt ctaaaacgca catcccgaaa aaatgccgtc tgaaagcctt tcagacggca
     2281 tctgttctga taatttg
//
LOCUS       DBBZXU010000172         2285 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.172, whole genome shotgun sequence.
ACCESSION   DBBZXU010000172 DBBZXU010000000
VERSION     DBBZXU010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2285)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2285)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2285
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.172"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            295..807
                     /locus_tag="ACJJDE_002041"
     CDS             295..807
                     /locus_tag="ACJJDE_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HGG7541899.1"
                     /translation="MKNFNGKLILIGLMGAGKTTLGRQMAQRLDYRFYDSDHEIAAAA
                     GVPIPTIFEMEGEQGFRSRETAILKKLVILPHIVLSTGGGAVLKEENRALIRKSGTVV
                     YLHAPPETLLERTRCDNSRPLLQVADPLAKLRELYAARDPVYRQTADFTVESANCRET
                     VQTLLKRLSR"
     gene            887..1966
                     /gene="aroB"
                     /locus_tag="ACJJDE_002042"
     CDS             887..1966
                     /gene="aroB"
                     /locus_tag="ACJJDE_002042"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014582239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HGG7541900.1"
                     /translation="MKTLTVHTPSHSYPIFIGNGLLPQAGSLLKPHLGKRAAIIANET
                     VAPLYLGTLQTALDAAGVSHFSIILPDGEAHKNWQTLNLIFDGLMQNRAERKTTLIAL
                     GGGVIGDMVGFAAATYQRGAPFVQIPTTLLSQVDSSVGGKTAINHPLGKNMIGAFYQP
                     QAVLADLDTLHTLPVRELSAGMAEVIKYGALGDIGFFEWLEQNISGLMTLDREKLAQA
                     VYRCCQMKADIVAQDETEQGIRAWLNLGHTFGHAIETEMGYGTWLHGEAIAAGCVLAA
                     RLSEQLGKTSAADTARLAALLEAAGLPSAPPVFAFEKWLEHMSHDKKVSGGIMRFIGL
                     NRLGEANITEITDTDILRRTLQPYL"
BASE COUNT          562 a          710 c          549 g          464 t
ORIGIN      
        1 ttgataaaca tattatcttc aatatattca attggataat tgtttaccta agcaaagata
       61 attgcctttt cctgacaaat aagtgaaatc aacggattgt caaaacacag cctgaaataa
      121 aaaacctccc tgatttcttt tatttgtcct taaaatcaga aaggttcggg atggtcgggt
      181 tatttttcca aacgtaccgc cgccctgccg atttcgtata aaattccgcc gtaacccgac
      241 aagcccgaac cctgtcgccc cgaaaggcgg ggtgtcaaac attaaggaat tgtgatgaaa
      301 aactttaacg gcaaactcat cctcatcgga ctgatgggcg cgggcaaaac cacgctgggc
      361 cggcaaatgg cgcagcggct ggattaccgt ttttacgaca gcgatcacga aatcgccgca
      421 gccgccggcg ttcccatccc caccatattt gaaatggaag gcgaacaggg attccgttcg
      481 cgcgaaaccg ccatactcaa aaagctggtt atcctgcccc atatcgtcct gtccaccggc
      541 ggcggcgcgg tgttaaaaga agaaaaccgc gcccttatcc gcaaaagcgg cacggtcgtc
      601 tatctgcacg ccccgcccga aaccctgctc gaacgcacgc gctgcgacaa cagccgtcct
      661 ttgctgcaag ttgccgatcc tttggcgaaa ttacgtgaac tctacgccgc acgcgacccc
      721 gtttaccgcc aaaccgccga ctttaccgta gaatcggcaa actgccggga aaccgtgcaa
      781 accctgctca aacgcttatc ccgataaacc ggcatatgcg ccgcgcccag aaaaccaagc
      841 cgcgccccgc ccggcgggcc ggcggttcaa actttaagga acaacaatga aaacactgac
      901 cgtacacacc ccgtcccaca gctaccccat ctttatcggc aacggactgc tgccgcaggc
      961 aggaagcctg ctcaaaccgc atttgggcaa acgcgccgcc atcatcgcca acgaaaccgt
     1021 cgccccgctc tacctcggca cgcttcagac ggcattggat gcggcaggcg tatcccattt
     1081 cagcatcatc ctgcccgacg gcgaggcgca caaaaactgg cagacgctca acctcatctt
     1141 tgacgggctg atgcaaaacc gcgccgaacg caaaaccaca ttaatcgcac tgggcggcgg
     1201 cgtgatcggc gacatggtcg gctttgccgc tgccacctac cagcgcggcg caccgttcgt
     1261 tcaaataccg accacactgt tgagtcaagt cgactcatcg gtgggcggca aaaccgccat
     1321 caaccacccg ctcggcaaaa atatgatcgg cgcattctac cagccgcagg cggtgcttgc
     1381 cgacttggac acgctgcaca ccctgcccgt ccgcgaattg tccgccggta tggcggaagt
     1441 catcaaatac ggcgcgctcg gcgacatcgg ttttttcgaa tggctcgaac aaaacatatc
     1501 cggactgatg acgctcgatc gggaaaaact cgcccaagcc gtgtaccgct gctgccaaat
     1561 gaaggcagac atcgtcgccc aagacgaaac cgaacagggc atacgcgcat ggctcaacct
     1621 cggacacacc ttcggacacg ccattgaaac cgagatgggt tacggcactt ggctgcatgg
     1681 agaagccatc gccgccggct gcgtgttggc ggcgcgtttg tccgaacaac tgggcaaaac
     1741 ctccgccgca gataccgcgc ggctcgccgc cctgctcgaa gccgctggac tgccgtccgc
     1801 accgcccgtg tttgcctttg aaaaatggct cgaacatatg agccacgata aaaaagtcag
     1861 cggcggcatc atgcgcttta tcggtctgaa ccggctgggc gaagccaaca tcaccgaaat
     1921 taccgacacg gacatcctcc gccgcaccct gcaaccgtat ctctgatttc ctctgccgat
     1981 gtgctgccgc gcgggtttga cgcacgatga tgattttcca tcatctttct ccgtaaaagc
     2041 gggaatccgg tccgttcggt ttcggtcgtt tccgataagt tcccgttgct tttcatttct
     2101 agattcccac tttcgcagga atgacggtgg aaaggttttt gttgtttcgg agaagtttct
     2161 gcaaccctag aatctcgtta tttccacaaa aaacagaaac ccaaaacagc aacttaaaac
     2221 ctcgtcattc ccgcaaaagc gggaatccgg tccgttcggt ttcggtcgtt tccgataaat
     2281 tcccg
//
LOCUS       DBBZXU010000173         2252 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.173, whole genome shotgun sequence.
ACCESSION   DBBZXU010000173 DBBZXU010000000
VERSION     DBBZXU010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.173"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            569..1384
                     /locus_tag="ACJJDE_002043"
     CDS             569..1384
                     /locus_tag="ACJJDE_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RTX iron-regulated FrpC family protein"
                     /protein_id="HGG7541901.1"
                     /translation="MRPYATTIYQLFILFIGSVFTMTSCEPVNEKTDQKAVSAQQAKE
                     QTSFNNPEPMTGFEHTVTFDFQGTKMVIPYGYLARYTQDNATKWLSDTPGQDAYSINL
                     IEISVYYKKTDQGWVLEPYNQQNKAHFIQFLRDGLDSVDDIVIRKDACSLSTTMGERL
                     LTYGVKKMPSAYPEYEAYEDKRHIPENPYFHKLYYIKKGENPAIITHRNNRINQTEED
                     NYSTSVGSCINGFTVRYYPFIREKQQLTQQELVGYHQQVEQLVQSFVNNPSKK"
     gene            1401..>2252
                     /locus_tag="ACJJDE_002044"
     CDS             1401..>2252
                     /locus_tag="ACJJDE_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7541902.1"
                     /translation="MNEGEVVLTPEQIQTLYGYASRGDTYGGWRYLANLGDRYADNAA
                     AIVGKDANLNGLNLWMKKGVENLWDDTVGKKTRLEKFDRVALQHFSQYVDLINENNGR
                     LPNTSEIERSYYKAVTYHGVSSSAAIDLVINRSLPDMADGYWALGLGIEAERIHNEQA
                     VNNPNGSESDNRKQLISALDKGFDGSFKEKHFTFLQSVIMDVTKLGVEYTIDGWQKIG
                     GWGNGIINDLYKSVAKREWTGIFEIVNNNIKQFRDLFPNPEGWIDDGHQCFAPWVKET
                     KKRNGKYH"
BASE COUNT          762 a          351 c          469 g          670 t
ORIGIN      
        1 caaaaatata ccaaaaacag caaaacaaat tgtaaggata cgtataggct ttgtaaaggt
       61 aaattgtgaa aaaagcagtt ttttaaacga atgaaacggc ttcgggctga aatatatgct
      121 gatgccctgt tcttcccgta tttctcgtgt gttgtcaaag tgcaggctgc tttgaaatcg
      181 gtattgccat ctatgaacca ccactttgct ttatttcagc gggcttgaga tgtgtataag
      241 gatattgttt tgaataaatt taaagaaaat gataatcgtt attgacgatt tttaaaggaa
      301 agcgtagagt gccaattcta tgaagcaata cggtaagtaa caatgaaaat atctactgct
      361 tgggtataga gcatatttca caacccgtaa ctattcttgc ggaaacagag aaaaaagttt
      421 ctcttctatc ttggataaat atatttaccc tcagtttagt taagtattgg aatttatacc
      481 taagtagtaa aagttagtaa attattttta actaaagagt tagtatctac cataatatat
      541 tctttaacta atttctaggc ttgaaattat gagaccatat gctactacca tttatcaact
      601 ttttattttg tttattggga gtgtttttac tatgacctca tgtgaacctg tgaatgaaaa
      661 gacagatcaa aaagcagtaa gtgcgcaaca ggctaaagaa caaaccagtt tcaacaatcc
      721 cgagccaatg acaggatttg aacatacggt tacatttgat tttcagggca ccaaaatggt
      781 tatcccctat ggctatcttg cacggtatac gcaagacaat gccacaaaat ggctttctga
      841 cacgcccggg caggatgctt actccattaa tttgatagag attagcgtct attacaaaaa
      901 aaccgaccaa ggctgggttc ttgagccata caaccagcaa aacaaagcac actttatcca
      961 atttctacgc gatggtttgg atagcgtgga cgatattgtt atccgaaaag atgcgtgtag
     1021 tttaagtacg actatgggag aaagattgct tacttacggg gttaaaaaaa tgccatctgc
     1081 ctatcctgaa tatgaagctt atgaagataa aagacatatt cctgaaaatc catattttca
     1141 taaactttac tatattaaaa aaggagaaaa tccggcgatt attactcatc ggaataatcg
     1201 aataaaccaa actgaagaag ataattatag cactagcgta ggttcctgta ttaacggttt
     1261 cacggtacgg tattacccgt ttattcggga aaagcagcag ctcacacagc aggagttggt
     1321 aggttatcac caacaagtag agcaattggt acagagtttt gtaaacaatc caagtaaaaa
     1381 ataatttaaa ggatcttatt atgaatgagg gtgaagttgt tttaacacca gaacaaatcc
     1441 aaaccttgta tggttatgct tctcgtggcg atacctatgg cggttggcgt tatttggcta
     1501 atttgggtga ccgttatgcg gataatgctg ccgcaattgt cggtaaggat gcaaacttaa
     1561 atggtttgaa tttatggatg aaaaaagggg tggaaaacct atgggatgat acggtcggta
     1621 aaaagacccg tttagagaaa tttgatcggg ttgcattgca acatttcagc caatatgtag
     1681 atctaattaa tgaaaataat ggtagattac ctaacactag tgaaattgag agaagttact
     1741 ataaagccgt tacctatcat ggcgtttctt ctagtgcagc tattgattta gttattaatc
     1801 gttcacttcc ggatatggcg gatggttatt gggcattagg tttggggata gaagccgaac
     1861 gtatccacaa tgagcaagca gtaaataatc cgaacggtag cgaatcggat aatagaaagc
     1921 agttaatatc tgctttagat aaaggatttg atggatcttt taaagagaag cattttactt
     1981 ttttacaatc tgtgataatg gatgtaacaa agttaggtgt tgaatataca atagatggtt
     2041 ggcaaaaaat tggaggttgg ggtaatggga taatcaatga tttatataaa agtgttgcaa
     2101 aaagagagtg gactggaata tttgagatcg ttaataataa catcaagcaa tttagagatc
     2161 tgttcccaaa tccggaaggc tggatcgatg atggtcacca atgtttcgct ccttgggtta
     2221 aagaaactaa aaaacgcaat ggcaaatatc at
//
LOCUS       DBBZXU010000174         2215 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.174, whole genome shotgun sequence.
ACCESSION   DBBZXU010000174 DBBZXU010000000
VERSION     DBBZXU010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2215)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2215)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2215
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.174"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            99..1910
                     /gene="typA"
                     /locus_tag="ACJJDE_002045"
     CDS             99..1910
                     /gene="typA"
                     /locus_tag="ACJJDE_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HGG7541903.1"
                     /translation="MKQIRNIAIIAHVDHGKTTLVDQLLRQSGTFRANQQVDERVMDS
                     NDLEKERGITILAKNTAIDYEGYHINIVDTPGHADFGGEVERVLGMVDCVVLLVDAQE
                     GPMPQTRFVTKKALALGLKPIVVINKIDKPSARPSWVIDQTFELFDNLGATDEQLDFP
                     IVYASGLSGFAKLEETDESNDMRPLFDTILKYTPAPSGSADETLQLQISQLDYDNYTG
                     RLGIGRILNGRIKPGQTVAVMNHDQQIAQGRINQLLGFKGLERVPLEEAEAGDIVIIS
                     GIEDIGIGVTITDKDNPKGLPMLSVDEPTLTMDFMVNTSPLAGTEGKFVTSRQIRDRL
                     QKELLTNVALRVEDTADADVFRVSGRGELHLTILLENMRREGYELAVGKPRVVYRDID
                     GQKCEPYENLTVDVPDDNQGAVMEELGRRRGELTNMESDGNGRTRLEYHIPARGLIGF
                     QGEFMTLTRGVGLMSHVFDDYAPVKPDMPGRHNGVLVSQEQGEAVAYALWNLEDRGRM
                     FVSPNDKIYEGMIIGIHSRDNDLVVNPLKGKKLTNIRASGTDEAVRLTTPIKLTLEGA
                     VEFIDDDELVEITPQSIRLRKRYLSELERRRHFKKLD"
BASE COUNT          564 a          627 c          582 g          442 t
ORIGIN      
        1 gcaagggctt cagacggcat cttcatttcc caaatactgt ccggtaaagc gtggtataat
       61 gcgcagttat ctcttacagt ttttgaaaaa cattaattat gaaacaaatc cgcaacatcg
      121 ccatcatcgc ccacgtcgac cacggcaaaa ccacattggt cgaccaactg ctgcgccaat
      181 ccggcacatt ccgagccaac cagcaggttg acgagcgcgt gatggacagc aacgacctcg
      241 aaaaagaacg cggcatcacc atcctcgcca aaaacaccgc catcgattac gaaggctacc
      301 acatcaatat cgtcgatacg ccgggacacg ccgacttcgg cggcgaagta gagcgcgttt
      361 tggggatggt ggactgcgtc gtcttgttgg tggacgcgca ggaaggcccg atgccgcaaa
      421 cccgtttcgt gaccaaaaaa gccttggctt tggggctgaa accgattgtc gtcatcaaca
      481 aaatcgacaa gccgtccgct cgtccgagct gggtcatcga ccaaactttc gagctgttcg
      541 acaacttggg cgcgaccgac gagcagttgg atttcccgat tgtttacgct tcagggttga
      601 gcggtttcgc caaattggaa gaaaccgacg agagcaacga catgcgtccg ctgttcgata
      661 ctatcttaaa atatacgcct gcaccgagcg gcagcgcgga cgaaacgctg caactgcaaa
      721 tttcccaact cgactacgac aactacaccg gccgcctcgg tatcggtcgt atcttgaacg
      781 gacgcatcaa acccggccaa accgttgccg tcatgaacca cgatcagcaa atcgcccaag
      841 gccgcatcaa ccagcttttg ggtttcaaag gtttggaacg cgtgccgctt gaagaagccg
      901 aagccggcga catcgtgatt atttccggta tcgaagacat cggcatcggc gtaaccatca
      961 ctgataaaga taaccccaaa ggcctgccga tgttgagcgt ggacgaaccg acgctgacca
     1021 tggactttat ggttaacacc agcccgttgg cgggcacgga aggcaaattc gtaaccagcc
     1081 gccaaatccg cgaccgcctg caaaaagaat tgctgaccaa cgtcgccctg cgcgtggaag
     1141 ataccgccga tgccgacgtg ttccgcgtat ccgggcgcgg cgagctgcac ctgaccattt
     1201 tgctggaaaa catgcgccgc gaaggctacg aactcgccgt cggcaaaccg cgcgtcgtgt
     1261 accgcgacat cgacggtcaa aaatgcgaac cgtatgaaaa cctgaccgtg gacgtacccg
     1321 acgacaacca aggcgcggta atggaagaac tcggccgccg ccgtggcgaa ctgactaata
     1381 tggaaagcga cggcaacgga cgcacccgcc tcgaatacca tattccagcg cgcggcttga
     1441 tcggcttcca aggcgaattt atgaccctga cgcgcggggt cgggctgatg agccacgtgt
     1501 tcgacgatta cgcgcccgtc aaacccgata tgcctggccg ccacaacggc gtgctggtgt
     1561 cccaagagca gggcgaggca gtcgcttacg ccttgtggaa tctggaagac cgcggccgta
     1621 tgttcgtatc gcccaacgac aaaatctacg aaggtatgat tatcggcatc cacagtcgcg
     1681 acaacgattt ggtggtcaac ccgctcaaag gcaaaaaact taccaacatc cgtgccagcg
     1741 gtaccgacga agccgttcgc ctgaccacgc cgattaagct gacgctggaa ggtgcggtcg
     1801 agtttatcga cgatgatgag ctggtagaaa tcacgccgca atccatccgt ctgcgcaagc
     1861 gttacttgag cgaattggaa cgccgccgcc atttcaaaaa gctagattga tgtttactgg
     1921 attaatgttt aaatgatacg cgatgccgtc tgaaaaattt cagacggcat tttttattcg
     1981 gacgggcttt gcggcttctt gaagctgttt cagacggcgt ttttcctacc caatcaagaa
     2041 actgccgcca tttttccagc ggcatatcgc cccgtcgcgt ttcggtatcg ggttcggctt
     2101 cccggcagca tgtcgaacaa tgccgtttga aggaatacgc cttttgagtc cttacaagct
     2161 taggaagagg atatagtgga ttaacaaaaa tcaggacaag gcgacgaagc cgcag
//
LOCUS       DBBZXU010000175         2193 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.175, whole genome shotgun sequence.
ACCESSION   DBBZXU010000175 DBBZXU010000000
VERSION     DBBZXU010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2193
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.175"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            30..515
                     /locus_tag="ACJJDE_002046"
     CDS             30..515
                     /locus_tag="ACJJDE_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003713215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541904.1"
                     /translation="MFVNEKDPYAALFAGLVFLTLPFALAVHDALAFVFGRTGLLVSV
                     SDGGFGWRGGWDGVVWFVYGVFAFLNLVVSAGLTKLAYKKMMRRHSRYALFLSGVAAC
                     AAAAVAWIFELLLGSGALGGLRGEAVLEYAFAVWLVAMLTLPKRLTRAPVQPVVFHRK
                     K"
     gene            611..1234
                     /gene="rsmG"
                     /locus_tag="ACJJDE_002047"
     CDS             611..1234
                     /gene="rsmG"
                     /locus_tag="ACJJDE_002047"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003707255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HGG7541905.1"
                     /translation="MERKERLRAGIAALGLDISAAAQDRLLAYVDLLKKWNKTYNLTA
                     LRDEEKMIVHHLLDSLTLLPHIEGVQTMLDVGSGGGQPGIPAAVCRPDVQITLLDANT
                     KKTAFLQQAVIELGLDNVRVVSGRVEAVSDVRADVVTSRAFAELADFVSWTVHLLKDG
                     GYWAAMKGVYPQEEIGRLPQDVCVEKVQRLDVPGLEAERHIVILSKR"
     gene            1333..2106
                     /locus_tag="ACJJDE_002048"
     CDS             1333..2106
                     /locus_tag="ACJJDE_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HGG7541906.1"
                     /translation="MSANILAIANQKGGVGKTTTTVNLAASLASRGKRVLVVDLDPQG
                     NATTGSGIDKAGLQSGVYQVLLGDADVKSAAVRSKEGGYAVLGANRALAGAEIELVQE
                     IAREVRLKNALKAVAEDYDFILIDCPPSLTLLTLNGLVAAGGVIVPMLCEYYALEGIS
                     DLIATVRKIRQAVNPDLDITGIVRTMYDSRSRLVAEVSEQLRSHFGDLLFETAIPRNI
                     RLAEAPSHGMPVMAYDAQAKGAKAYLALADELAARVSGK"
BASE COUNT          422 a          503 c          761 g          507 t
ORIGIN      
        1 tcggtctgct tcggaagagg gggacggcga tgtttgtgaa cgagaaagat ccttatgcgg
       61 ctctgtttgc gggactggtg tttttgacgc tgccgtttgc gttggcggtg catgatgcct
      121 tggcatttgt gttcggacgg acggggctgc tggtgtcggt gtcggacggc ggattcggct
      181 ggcgaggagg ctgggacggc gtggtgtggt ttgtgtatgg cgtgtttgcg tttttgaacc
      241 tggtcgtgtc ggcgggcctg acgaaactgg cgtacaaaaa gatgatgcgg cggcattccc
      301 gttacgcgct gtttctgtcg ggcgtggcgg cttgcgcggc tgctgcggtc gcgtggattt
      361 tcgagctgct gcttggcagt ggggctttgg gcgggctgcg tggggaggcg gtgttggaat
      421 atgcgtttgc cgtgtggctg gtggcgatgc tgacgctgcc caaacgcctg acgcgcgcgc
      481 cggtgcagcc ggtggtgttt cacaggaaaa aataggttgg aacgggaaat gccgtctgaa
      541 ccccgacacg cggtttcaga cggcatgttt ttccgttaac attacgcctg aacatggaca
      601 ggatagggat atggaacgca aagaacgcct gcgtgcaggc atcgccgcat tgggtttgga
      661 tatttccgca gcggcgcagg acaggctttt ggcctatgtg gatttgttga aaaagtggaa
      721 caaaacctac aatctgaccg ccctgcgcga cgaggaaaaa atgattgtcc atcatctttt
      781 ggacagcctg acgctgctgc cccatatcga gggtgtgcaa acgatgctgg atgtcggttc
      841 gggcggcggt cagcccggca ttccggcggc ggtgtgccgt ccggatgtgc agataaccct
      901 tttggatgcg aatacgaaga aaacggcttt tttacagcag gcggttatcg agttgggatt
      961 ggacaatgtg cgcgtggtat ccggacgcgt ggaggcggtt tcggacgtgc gtgccgatgt
     1021 ggttaccagc cgtgcgtttg cagaactggc ggattttgtg tcgtggacgg tgcatctgtt
     1081 gaaagacggc ggctactggg cggcgatgaa gggcgtgtat ccgcaggaag aaatcggccg
     1141 cctgccgcag gatgtgtgcg ttgaaaaagt ccaaaggctc gacgtgccgg gcttggaggc
     1201 ggaacgccat atcgttatcc tgagcaagcg ttgagcgcgc ttcagacggc atgaatacct
     1261 tttttgtgcg gataaaggta aaattccgca ctgtttttct tttttcaaca tcagacggga
     1321 cacgggcggg acatgagtgc gaacatcctt gccatcgcca atcagaaggg cggtgtgggc
     1381 aaaacgacga cgacggtaaa tttggcggct tcgctggcat cgcgcggcaa acgcgtgctg
     1441 gtggtcgatt tggatccgca gggcaatgcg acgacaggca gcggcatcga caaggcgggt
     1501 ttgcagtccg gcgtttatca ggtcttattg ggcgatgcgg acgtgaaatc ggcggcggta
     1561 cgcagcaaag agggcggata cgctgtgttg ggtgcgaacc gcgcgctggc cggcgcggaa
     1621 atcgagctgg tgcaggaaat cgcccgggaa gtgcgtttga aaaacgcgct caaggcagtg
     1681 gcggaagatt acgactttat cctgatcgac tgtccgcctt cgctgacgct gttgacgctt
     1741 aacggcttgg tggcggcggg cggcgtgatt gtgccgatgt tgtgcgaata ttacgcgctg
     1801 gaagggattt ccgatttgat tgcgaccgtg cgcaaaatcc gtcaggcggt caatcccgat
     1861 ttggacatca cgggcatcgt gcgcacgatg tacgacagcc gcagcaggct ggttgccgaa
     1921 gtcagcgaac agttgcgcag ccatttcggg gatttgcttt ttgaaaccgc catcccgcgc
     1981 aatatccgcc ttgcagaagc gccgagccac ggtatgccgg ttatggctta tgatgcgcag
     2041 gcaaagggtg ccaaggcgta tcttgccttg gcggacgagc tggcggcgag ggtgtcgggg
     2101 aaataggtca atccaaatcg ggctgcccgt gcctttatgc tgtttggccg ggtgcgttaa
     2161 tatggcggat taaaataaaa atacttatat cgt
//
LOCUS       DBBZXU010000176         2101 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.176, whole genome shotgun sequence.
ACCESSION   DBBZXU010000176 DBBZXU010000000
VERSION     DBBZXU010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2101)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2101)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2101
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.176"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..941
                     /gene="repM"
                     /locus_tag="ACJJDE_002049"
     CDS             <1..941
                     /gene="repM"
                     /locus_tag="ACJJDE_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="replication initiation protein RepM"
                     /protein_id="HGG7541907.1"
                     /translation="NFHTNRNTAYKALKDTCNNLFERQFSFIEKTPKGEKVVRTRWVS
                     QVAYIEQQATVELVFAPNVAPLITMLEKNFTSYELDQVSSLSSKYAVRLYEIIISWRA
                     AGKTPMFSTMELRERLGMMPDEYQKMELFKRKVLDFAVKQINDKTDISITYEQHKEGR
                     KIVGFTFSILHKIGSKDIPLENQSELFAGMTDLEAGTIRVRAEAYIASLIAKGQNVTK
                     AHRLNILKKAVEERWGFEDVAKDNGAKNPENKNAKVVLNEWEKISNGTRFKDKDGTIW
                     VKDSGMLRTEGTNRWIADSQIAKLFPMLTVMVEEGI"
     gene            1038..1454
                     /locus_tag="ACJJDE_002050"
                     /pseudo
     CDS             1038..1454
                     /locus_tag="ACJJDE_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DnaB-like helicase N-terminal domain-containing
                     protein"
     gene            complement(1460..1558)
                     /locus_tag="ACJJDE_002051"
                     /pseudo
     CDS             complement(1460..1558)
                     /locus_tag="ACJJDE_002051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611454.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
     gene            1651..>2101
                     /locus_tag="ACJJDE_002052"
     CDS             1651..>2101
                     /locus_tag="ACJJDE_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ESPR-type extended signal peptide-containing
                     protein"
                     /protein_id="HGG7541908.1"
                     /translation="MNRTLYKVVFNKHRNCMIVVAENAKREGKNTADTQAVGILPNDI
                     AGFAGFIHSISVISFSLSLLLGSALILTSSSANAQGIVADKSAPAQQQPTILQTGNGI
                     PQVNIQTPTSAGVSVNQYAQFDVGNRGAILNNSRSNTQTQLGGWIQGN"
BASE COUNT          623 a          458 c          485 g          535 t
ORIGIN      
        1 ataatttcca taccaaccgt aatacggcgt ataaggcttt gaaagatacc tgtaacaacc
       61 tttttgaacg ccaattcagt tttatcgaaa aaacaccaaa aggggaaaag gtagtacgga
      121 caaggtgggt atctcaagtc gcctatattg aacaacaggc aacggtagag ttagtttttg
      181 caccaaatgt tgcccctttg attacgatgc tagaaaaaaa cttcacaagc tacgagcttg
      241 atcaggtctc atcgttgagc agtaaatacg cggtgcggct ctacgaaatt attatttcat
      301 ggcgtgcagc cggtaagaca ccgatgttca gtacaatgga gttgcgcgaa cgtttgggta
      361 tgatgcctga cgagtatcaa aaaatggagc tattcaaacg taaggttttg gatttcgccg
      421 tcaagcagat caatgataaa acggatattt ccattaccta cgagcagcat aaagaaggac
      481 gaaaaattgt aggttttaca ttctcaatcc tacataaaat agggtcgaaa gacatccctc
      541 ttgaaaatca atcggaactt tttgccggaa tgactgattt ggaagccgga acgatacggg
      601 tcagggcgga agcatatatc gcttcgctca ttgcaaaagg tcagaacgtg actaaagccc
      661 ataggctgaa tattctgaaa aaagccgtag aggaacgttg gggatttgaa gatgtggcta
      721 aagataatgg ggccaaaaat cctgaaaaca aaaatgcaaa agtcgtttta aacgaatggg
      781 aaaagatttc taatggcaca cgttttaagg acaaggatgg aacaatttgg gttaaagatt
      841 caggtatgct taggactgaa gggacaaaca ggtggatagc cgattctcag attgccaaat
      901 tatttcctat gttaactgtg atggttgagg aaggtattta acccggcaac tcgcgtattc
      961 tacctgtttt gcggtacgga aaccaattga acctgcttta cgctacaata gaagattgca
     1021 attttgtcgg atgtaccatg aacgattaca cagccatgcc gtctgaagac ggaggaatcg
     1081 gctcattatc gcttccgccg cactcaatgg aggcggaaca atccgttttg ggcgggttga
     1141 tgctggaaaa tccggcttgg gacaggattg ccgatgtggt ttcgggagag gatttctacc
     1201 gccacgaaca ccgcctgatt ttccgatcca ttgccaaact gatcaatgag agccgtcctg
     1261 ccgatgtcat cacggttcag gaagatttgc agcggaacga agagctggaa gcggcggggg
     1321 gattcgaata tctgattacg ctggcgcaaa atactccgtc tgccgccaac atccggcgcc
     1381 atgccgaaat cgtgcgcgag cgttccatta tgcgccaact cgccgaagtg ggaacggaaa
     1441 ttgcccgcag cgccataccc aaaatatcgg cagcggaacg ggcggtagct tggagtacga
     1501 aaaattcaag cagtttcttt tgaactctat tgtttaattt acaattggtt atctttattt
     1561 tcgtagcctg gcataactgt taatctacgt cagcccctaa aaattaatct aatttacgat
     1621 tataaaaata ttattaagaa agcccttact atgaaccgca ccctgtacaa agttgtattt
     1681 aacaaacatc gaaactgcat gatagtcgtt gctgaaaatg ccaaacgcga gggcaaaaac
     1741 acagccgaca cccaagctgt aggtattttg ccaaatgata ttgcgggctt tgcgggtttt
     1801 atccattcta tctctgttat ctcattctcc ctttcattac tgctcggttc tgcccttatc
     1861 ctgacttctt cttctgctaa tgcccaaggt atcgttgccg acaaatccgc acctgcacag
     1921 caacagccta ccatcctgca aacaggtaac ggcataccgc aagtcaatat tcaaacccct
     1981 acttcggcag gggtttctgt taatcaatac gcccagtttg atgtgggtaa tcgcggggcg
     2041 attttaaaca acagtcgcag caacacccaa acacagctag gcggttggat tcaaggcaat
     2101 c
//
LOCUS       DBBZXU010000177         2006 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.177, whole genome shotgun sequence.
ACCESSION   DBBZXU010000177 DBBZXU010000000
VERSION     DBBZXU010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 2006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2006
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.177"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            301..1758
                     /locus_tag="ACJJDE_002053"
     CDS             301..1758
                     /locus_tag="ACJJDE_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012779527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HGG7541909.1"
                     /translation="MSRHPAPTGEKTFFGHPFQLSTLFHIELWERFSFYGMQGILLIY
                     LYYTADKGGLGIDKTLAGGIVGAYSGSVYLSTILGAWFADRVWGAEKTLFLSGIVVML
                     GHIVLAAAPGLYGLLIGLIFIALGSGGVKSTASSMVGALYEQDEMRPLRDAGFSIFYI
                     AINIGGFLGPLLTGLLQENIGFHYGFGAAAVGMAFGLWRYSLGRKNLPHPTVPHPLSK
                     GQGKTAAAVGITLIAALATAIKTGLVNLDNFSGILLSTVILAVIAYFARLLTNPRVSS
                     DNKRHIIAYIPLFLTICMFWAVWFQIYTVATVYFDETVNRTIGSFTVPVAWKDSMQSL
                     WVILFSGLMAAMWTKMGRKQPKTPLKFAMAVFVTGASFLGFVPFISAGTPMPIAVFAL
                     IVLAITIGELMISPIALSISTKIAPPLFKTQMVALNFLAFSLGFTLGGVLFEKGYQAG
                     DEIGFYRLLFYIGATTGFLLLLLVPKLNKMLEGTD"
BASE COUNT          451 a          601 c          463 g          491 t
ORIGIN      
        1 atagtacggc aaggcgaggc aacgccgtac tggtttttgt taatccacta taaaaaaccg
       61 ccctatcgga taagccctta acagaaaagg ctttacccgc gccgtatcgg aacacatcct
      121 ctaaaataca atccgttgaa ttgaaaaaaa tataaaaaca tccgcccgcg aaaaacggca
      181 gcgcgtcgtt tgacaaagaa tgaaaatatc ggttaaaaac cgattttcat acaaaaaaca
      241 ccgctgccgt ccgcatccgt ttcagacggt attgagagaa aatcttttag gagaaccttt
      301 atgtcccggc atcccgcccc caccggagaa aaaacattct tcggccaccc cttccagctt
      361 tccaccctct tccatatcga attgtgggaa cgtttttcat tttacggaat gcagggcatc
      421 ctgctgattt acctctacta caccgccgac aaaggcggct tgggcataga caaaaccctc
      481 gccggcggca ttgtcggcgc atacagcggc agcgtgtacc tgtccaccat tttgggggcg
      541 tggtttgccg accgagtatg gggtgcggaa aaaaccctct tcctctcggg catcgtcgtg
      601 atgctcggac acatcgtcct tgccgccgcc ccgggcctgt acggtctttt aatcgggctg
      661 atattcatcg cattgggcag cggcggtgtg aaatctacgg ccagttctat ggtgggcgca
      721 ttatacgaac aggacgaaat gcgcccgctg cgcgatgcgg gattttccat tttctacatc
      781 gccatcaaca tcggcggctt cctgggcccg ctgctgaccg gcctgctgca ggaaaacatc
      841 ggtttccatt atggtttcgg cgcggcggcg gtcggtatgg cattcggctt gtggcgttat
      901 tccttgggac gtaaaaacct gccccacccc accgtccccc atccgctttc aaaaggacag
      961 ggcaaaactg cggccgccgt cggcatcacc ctcatcgccg cacttgcaac cgccatcaaa
     1021 accgggcttg tcaacctcga caatttctcc ggcatcctct tatctaccgt catccttgcc
     1081 gtcattgcct atttcgcccg cctgctgacc aacccccgcg tcagttccga caacaaacgg
     1141 cacatcatcg cctacatccc gcttttcctg accatctgta tgttttgggc cgtctggttt
     1201 cagatttaca ccgtggcaac cgtctatttc gacgaaaccg tcaaccgcac catcggttcg
     1261 tttaccgtgc ccgtcgcctg gaaagattcc atgcaaagcc tgtgggtcat cctgttttcc
     1321 ggactgatgg cggcaatgtg gacaaaaatg gggcgcaaac agcccaaaac cccgctgaaa
     1381 ttcgctatgg cggtatttgt taccggcgcg tcgtttttgg gattcgtccc ctttatttcc
     1441 gccggcacgc cgatgcctat tgcggttttc gcactgattg tccttgccat cacgataggc
     1501 gaactgatga tttccccgat tgcgctgtcc atctccacca aaatcgcacc gcctttattc
     1561 aaaacccaaa tggtcgccct taatttcctt gccttttcat taggcttcac tttgggcggc
     1621 gtattgtttg agaaaggcta tcaggcgggc gacgaaatcg gcttctaccg gctgctgttc
     1681 tacatcggcg caaccacagg cttcctgctg ctcctgctcg tccccaaatt gaacaaaatg
     1741 ctcgaaggca cagactaagt cccgccccga tgcgccgatg ccgtctgaac ccttcagacg
     1801 gcatttttcc gcataatgaa accaaaccgt ttccacccga caggacaggc tccccccaac
     1861 cggaaggcag cctgccgatt gtcatttgaa tatctgactg attccgtctg tttgcaaggg
     1921 aaatagccgt ttatttccgc ttgggcggaa accggttcta ttgagtaaaa ggcattttat
     1981 ccgactaaat tagtgctgca tcaacg
//
LOCUS       DBBZXU010000178         1985 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.178, whole genome shotgun sequence.
ACCESSION   DBBZXU010000178 DBBZXU010000000
VERSION     DBBZXU010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1985
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.178"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            112..1881
                     /locus_tag="ACJJDE_002054"
     CDS             112..1881
                     /locus_tag="ACJJDE_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YadA-like family protein"
                     /protein_id="HGG7541910.1"
                     /translation="MNKIYRIIWNSALNAWVVVSELTRNHTKRASATVATAVLATLLS
                     ATVQANATDTDEDEELESVVRSALVLQFMIDKEGNGEIESTGDIGWSIYYDDHNTLHG
                     ATVTLKAGDNLKIKQSGKDFTYSLKKELKDLTSVETEKLSFGANGNKVNITSDTKGLN
                     FAKETAGTNGDPTVHLNGIGSTLTDTLAGSSASHVDAGNQSTHYTRAASIKDVLNAGW
                     NIKGVKTGSTTGQSENVDFVRTYDTVEFLSADTKTTTVNVESKDNGKRTEVKIGAKTS
                     VIKEKDGKLVTGKGKGENGSSTDEGEGLVTAKEVIDAVNKAGWRMKTTTANGQTGQAD
                     KFETVTSGTKVTFASGNGTTATVSKDDQGNITVKYDVNVGDALNVNQLQNSGWNLDSK
                     AVAGSSGKVISGNVSPSKGKMDETVNINAGNNIEITRNGKNIDIATSMTPQFSSVSLG
                     AGADAPTLSVDDEGALNVGSKDANKPVRITNVAPGVKEGDVTNVAQLKGVAQNLNNRI
                     DNVDGNARAGIAQAIATAGLAQAYLPGKSMMAIGGGTYRGEAGYAIGYSSISDTGNWV
                     IKGTASGNSRGHFGTSASVGYQW"
BASE COUNT          593 a          469 c          509 g          414 t
ORIGIN      
        1 gttgggggaa tttatcagaa aacccccaac ccccaaaaac cgggcggatg ccgcaccatc
       61 cgcccccaaa ccccgattta accattcaaa caaaccaaaa gaaaaaacaa aatgaacaaa
      121 atataccgca tcatttggaa tagtgccctc aatgcctggg tagtcgtatc cgagctcaca
      181 cgcaaccaca ccaaacgcgc ctccgcaacc gtggcgaccg ccgtattggc gacactgctg
      241 tccgcaacgg ttcaggcgaa tgctaccgat accgatgaag atgaagagtt agaatccgta
      301 gtacgctctg ctctggtgtt gcaattcatg atcgataaag aaggcaatgg agaaatcgaa
      361 tctacaggag atataggttg gagtatatat tacgacgatc acaacactct acacggcgca
      421 accgttaccc tcaaagccgg cgacaacctg aaaatcaaac aaagcggcaa agacttcacc
      481 tactcgctga aaaaagagct gaaagacctg accagtgttg aaactgaaaa attatcgttt
      541 ggcgcaaacg gtaataaagt caacatcaca agcgacacca aaggcttgaa ttttgcgaaa
      601 gaaacggctg ggacgaacgg cgaccccacg gttcatctga acggtatcgg ttcgactttg
      661 accgatacgc ttgcgggttc ttctgcttct cacgttgatg cgggtaacca aagtacacat
      721 tacactcgtg cagcaagtat taaggatgtg ttgaatgcgg gttggaatat taagggtgtt
      781 aaaactggct caacaactgg tcaatcagaa aatgtcgatt tcgtccgcac ttacgacaca
      841 gtcgagttct tgagcgcaga tacgaaaaca acgactgtta atgtggaaag caaagacaac
      901 ggcaagagaa ccgaagttaa aatcggtgcg aagacttctg ttattaaaga aaaagacggt
      961 aagttggtta ctggtaaagg caaaggcgag aatggttctt ctacagacga aggcgaaggc
     1021 ttagtgactg caaaagaagt gattgatgca gtaaacaagg ctggttggag aatgaaaaca
     1081 acaaccgcta atggtcaaac aggtcaagct gacaagtttg aaaccgttac atcaggcaca
     1141 aaagtaacct ttgctagtgg taatggtaca actgcgactg taagtaaaga tgatcaaggc
     1201 aacatcactg ttaagtatga tgtaaatgtc ggcgatgccc taaacgtcaa tcagctgcaa
     1261 aacagcggtt ggaatttgga ttccaaagcg gttgcaggtt cttcgggcaa agtcatcagc
     1321 ggcaatgttt cgccgagcaa gggaaagatg gatgaaaccg tcaacattaa tgccggcaac
     1381 aacatcgaga ttacccgcaa cggcaaaaat atcgacatcg ccacttcgat gaccccgcaa
     1441 ttttccagcg tttcgctcgg cgcgggggcg gatgcgccca ctttaagcgt ggatgacgag
     1501 ggcgcgttga atgtcggcag caaggatgcc aacaaacccg tccgcattac caatgtcgcc
     1561 ccgggcgtta aagaggggga tgttacaaac gtcgcacaac ttaaaggtgt ggcgcaaaac
     1621 ttgaacaacc gcatcgacaa tgtggacggc aacgcgcgcg cgggtatcgc ccaagcgatt
     1681 gcaaccgcag gtttggctca ggcctatttg cccggcaaga gtatgatggc gatcggcggc
     1741 ggtacttatc gcggcgaagc cggttacgcc atcggctact cgagcatttc tgacactggg
     1801 aattgggtta tcaagggcac ggcttccggc aattcgcgcg gtcatttcgg tacttccgca
     1861 tctgtcggtt atcagtggta agggcttttt cgcctgtctg ctgttggggc aggcggaagg
     1921 tttgaaggga agggtggcga tttgccgcct gagacctttg caaaattccc caaaatcccc
     1981 taaat
//
LOCUS       DBBZXU010000179         1941 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.179, whole genome shotgun sequence.
ACCESSION   DBBZXU010000179 DBBZXU010000000
VERSION     DBBZXU010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1941
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.179"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            565..1869
                     /locus_tag="ACJJDE_002055"
     CDS             565..1869
                     /locus_tag="ACJJDE_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium channel activity
                     [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HGG7541911.1"
                     /translation="MKKHIWAASLLPASLSAEPLNWWKPYSAVNSGDTAWVMTAAALV
                     LLMTLPGLALFYGGMVRKKNLLSTMMHSFSIATLVGILWVAVGYSLAFTPGNAFIGGL
                     GRVFLSGMQIDATAQMLTVSPNAPTVPEPVFMFFQMTFAIISTAIITGAFAERMKYSA
                     MMLFSGIWFLLVYVPGAHWVWGGGFMSKGGVLDYAGGTVVHINAGIAGLVAALVLGRR
                     IGYGREAMPPHNMAMTLIGAAMLWFGWFGFNAGSALAADAAAGMAMAVTQVSAVFGAA
                     GWLACEKIAGHKPSALGLASGAVSGLVGITPAAGFTGPSGAAAIGILTAAACFVSVTV
                     VKHKLRYDDSLDAFGIHGFGGLVGGILTGIFFDNRIFGGDAAVWQQLWIQVKDGFVMA
                     AYSGLMSWAILKVVGKICGGLRVGKDVEREGLDLNIHGERVE"
BASE COUNT          407 a          482 c          556 g          496 t
ORIGIN      
        1 aatgacggtt cgggcattcc ttaaatcacc cgtgtatcgc tgtaaatctt agagatggcg
       61 gaatatagcg gattaacaaa aaccagtacg gcgttgtctc gccttagctc aaagagaacg
      121 attctctaag gtgctgaagc accaagtgaa acggttccgt actatttgta ctgtctgcgg
      181 cttcgtcgcc ttttcctgat ttttgttaat ccactatatt tccaattaaa aatttttaat
      241 atattaatca ataaattaat tttataaaat aaaaatattg tcaacaatat tttgccttat
      301 cgcccaaacc tctgtatatt ttcctacagt aaattgttga caatccatac gcccacatat
      361 gcgccgccta aggataaatc ctcccgccgg acaacgggtg caagggatcg gatgcgatat
      421 ttccatattc aaacaaggga ttggcggcac atcggcaaaa tccccgcgcc gccccggtcc
      481 ggcagggctt gcgtccctcc cggacaagcc ccgaccccgc ctttccgaaa gacgggctca
      541 accattaagg aaactttaat caaaatgaaa aaacacatat gggcggcatc tttgctgccg
      601 gcatccctat cggcagaacc tttaaactgg tggaagcctt attccgccgt caattcgggc
      661 gataccgcct gggtgatgac tgcggctgcc ttggtactgt tgatgacgct tcccgggctg
      721 gctttattct acggcggtat ggtgcggaaa aaaaacctgc tctcgacgat gatgcacagc
      781 ttttccatcg cgacattggt gggcatcctt tgggtcgccg tcggctattc tttagcgttc
      841 acgccgggaa atgcctttat cggcggtttg gggcgcgtat ttttaagcgg gatgcagata
      901 gacgctaccg cacagatgct gaccgtgtcg cccaatgcgc cgactgttcc cgaaccggta
      961 tttatgtttt ttcagatgac gtttgccatt atttcgaccg ccattattac cggcgcgttt
     1021 gccgaacgga tgaaatattc ggcaatgatg ctgttttcgg gcatatggtt tttattggtt
     1081 tatgtgccgg gcgcgcattg ggtgtggggc ggcggcttta tgagcaaggg cggcgtattg
     1141 gattatgccg gcggtacggt ggtgcacatc aatgccggta tcgcgggact cgtcgccgcc
     1201 ttggttttgg gcaggcgcat aggctacggg cgcgaggcga tgcctccgca caatatggcg
     1261 atgacactga tcggcgcggc aatgttgtgg ttcggctggt tcggctttaa cgccggatcg
     1321 gcgcttgcgg cagacgcggc ggcgggtatg gcgatggcgg taacgcaggt gtcggccgta
     1381 ttcggcgcgg caggctggct tgcctgcgaa aaaatagcgg gacacaaacc ttccgctttg
     1441 gggctggctt ccggcgcggt ttccggtctg gtcggcatca cccctgccgc cggctttacc
     1501 ggcccgtcgg gcgcggccgc catcggtata ttgactgccg ccgcgtgctt tgtgtccgtc
     1561 accgtcgtca aacacaaatt gcgttacgat gattctttgg acgctttcgg catacacgga
     1621 ttcggcgggc tggtgggcgg aatattgacc ggcatctttt tcgacaaccg cattttcggc
     1681 ggggatgcgg cagtttggca gcagttgtgg atacaggtaa aagacgggtt cgttatggcg
     1741 gcatacagcg ggctgatgag ttgggcgatt ttgaaggtcg tggggaaaat ctgcggcggc
     1801 ctgcgcgtcg gcaaggatgt cgaacgcgaa ggtttggatc tgaatatcca cggcgaacgc
     1861 gtggaataag ggcggctatg ccgtctgaag cctgaaaatc gggtttcaga cggcattttt
     1921 cacgtttgcc gccgatggat a
//
LOCUS       DBBZXU010000180         1929 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.180, whole genome shotgun sequence.
ACCESSION   DBBZXU010000180 DBBZXU010000000
VERSION     DBBZXU010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1929)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1929)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1929
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.180"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(173..1483)
                     /locus_tag="ACJJDE_002056"
     CDS             complement(173..1483)
                     /locus_tag="ACJJDE_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HGG7541912.1"
                     /translation="MTDLFAREPDAPLAERLRPHTLDDVVGQEHLIGEGKSLRVAVEG
                     GKPHSMLLWGPPGVGKTTLARILAQSFNAQFLPVSAVFSGVKDIRGAIDKAEIALQQG
                     RATILFVDEVHRFNKAQQDAFLPYVENGLLTFIGATTENPSFEVNPALLSRAQVYVLQ
                     SLSSDDLKKLIAKVLALPEYQEFTIETDAQKLLVNTADGDARRLLNLLEQLLGAAETR
                     RLKTLTAEFLADSLGAQIRRFDKGGESFYNQISALHKSVRGSHPNAALYWFCRMLDGG
                     TDPRYLARRIVRIAWEDIGLADPRALQIANDAAATFERLGSPEGELALAQAVLYLAAA
                     AKSNAGYKAYNQMRRFVKENASDEVPVHLRNAPTKLMKELGYGREYRYAHDEPNAYAA
                     GESYMPDCLDEPDFYQPVPRGLEIKIGEKLEWLKSLDEEVLKAK"
     gene            1738..1929
                     /locus_tag="ACJJDE_002057"
                     /pseudo
     CDS             1738..1929
                     /locus_tag="ACJJDE_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213469.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          464 a          505 c          492 g          468 t
ORIGIN      
        1 tcgttctctt tgagctaagg cgaggcaacg ccgtactggt ttaaacttaa tccactatac
       61 cacgttgtct ttattggctt tatcaataaa caggataaga cctgaaaaaa agccgatacg
      121 cctttttggt gtaccggctt tgccatactg ttctgcttca gacagcattg cttcattttg
      181 cctttaatac ttcttcgtcc agcgatttca accattccag cttttcgccg attttgattt
      241 ccaacccgcg cgggacgggt tggtagaagt ccggttcgtc caagcagtcg ggcatatagc
      301 tttcgccggc ggcgtaggcg ttcggttcgt cgtgggcgta gcggtattcg cgtccgtagc
      361 ccaattcctt catcagcttg gtcggggcat tgcgcaggtg gacgggtact tcgtcgctgg
      421 cgttttcttt gacgaaacgg cgcatttgat tgtatgcctt gtagcccgcg ttggatttcg
      481 cggcggcggc aagatacaat accgcttgcg ccaaagccag ttcgccttcg ggcgagccta
      541 agcgttcgaa ggtggcggcg gcatcgttgg cgatttgcaa ggcgcgcggg tcggcaagcc
      601 cgatgtcttc ccaagcgata cgcacgatgc ggcgggcgag gtagcgcggg tcggtgccgc
      661 cgtcgagcat acggcagaac caatacagcg cggcgttcgg atgcgaaccg cgcacggatt
      721 tgtgcagggc ggagatttgg ttgtagaaac tctcgccgcc tttgtcgaaa cggcggattt
      781 gcgccccgag actgtcggcg agaaattcgg cagtcagggt tttcagacgg cgcgtttcag
      841 cggcgcctaa cagttgttcc aacaaattca acaatctgcg cgcatcaccg tcggcggtat
      901 tcacgagtaa tttttgcgca tccgtttcaa tcgtaaactc ttggtattca ggcaaagcca
      961 ataccttggc aatcagcttt ttcaggtcgt ctgaagacaa ggattgcaaa acatacacct
     1021 gcgcgcggct caacagcgcg ggattcactt caaacgacgg attttccgtc gttgcgccaa
     1081 taaaggtcag caaaccgttt tccacataag gcaaaaacgc atcctgctgc gccttgttga
     1141 agcggtggac ttcatcgaca aacaaaatcg tcgccctccc ctgctgcaaa gcgatttcag
     1201 ccttgtcgat tgccccgcgt atgtctttta cgccggaaaa cacggcggaa acaggcagaa
     1261 actgggcatt gaaactctgc gccaaaatcc gcgccaacgt cgtcttgccc acgcccggcg
     1321 gcccccacag caacatagaa tgcggcttgc ccccttctac cgccacgcgc aaagatttac
     1381 cttcgccgat gaggtgttcc tgccccacca cgtcgtcaag cgtatgcgga cgcaatcgtt
     1441 cggcaagcgg cgcgtcgggt tctcgggcaa acaaatcggt cataacggct ccgtcaacag
     1501 gttttcaaac aatatgatta tacggcaggg aacggcggcg tgccgcatac ggattccgcc
     1561 cctccgtttg ccttaagccg atattaggcg catactggaa aagacgagag acttcacaca
     1621 atatatccgg cacggagacc gattccgcac cggcatgaca atacccaaat cagcgtttca
     1681 attaaacatt aaggagacta aaatagaaaa tttgctttat ctaccattgc tttgttgatt
     1741 caatcggcat tatgttttga ggcggaagcc catgaatata ctaatattca agagatggaa
     1801 tgggtgtctt tattttctga tccgcaaaaa gacgatgata gtcttataac ccttaaagat
     1861 gaaaaaatca ctgtaaaaaa ctatattgtg ccttggtgga aaaaagtgaa aactttagaa
     1921 aattagaac
//
LOCUS       DBBZXU010000181         1927 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.181, whole genome shotgun sequence.
ACCESSION   DBBZXU010000181 DBBZXU010000000
VERSION     DBBZXU010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.181"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(28..351)
                     /locus_tag="ACJJDE_002058"
     CDS             complement(28..351)
                     /locus_tag="ACJJDE_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HGG7541913.1"
                     /translation="MDMVVRGGIYLVSLDPTVGSEIKKTRPCVVVSPPEIHNYLKTVL
                     IVPMTSGSRPAPFRVNVRFQDKDGLLLPEQIRAVDKAGLVKHLGNLDNSTAEKLFAVL
                     QEMFA"
     gene            complement(702..1499)
                     /gene="truA"
                     /locus_tag="ACJJDE_002059"
     CDS             complement(702..1499)
                     /gene="truA"
                     /locus_tag="ACJJDE_002059"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003703378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HGG7541914.1"
                     /translation="MDTAQKQRWAITLSYDGSRFYGWQKQAGGVPTVQTALETALAQI
                     AGEFVATTVAGRTDTGVHATAQVVHFDTTAVRPQQAWVRGVNAHLPEGIAVLHARQVA
                     PEFHARFDAYGRHYRYLLESAPVRSPLLKNRAGWTHLKLDIEPMRRAAAYLIGEQDFS
                     SFRAAECQAKSPVKTIYRADLTQSAGLVRLDLHGNAFLHHMVRNIMGALVYVGSGRLS
                     VEGFAALIQERSRLKAPPTFMPDGLYLTGVDYPEAYGIIRPKIPEWL"
BASE COUNT          434 a          455 c          541 g          497 t
ORIGIN      
        1 tgaacacaat ccattcagac tattcaatca ggcaaacatc tcctgcaata ctgcaaacag
       61 tttttcagcc gtactgttgt ctaaattgcc aagatgcttg accaatccgg ctttatccac
      121 agccctaatc tgttcgggca aaagcaaacc gtctttatcc tgaaagcgga cattgacgcg
      181 gaacggggca ggacggcttc cgctcgtcat gggaacgatc agcacagtct tgagatagtt
      241 gtgtatttca ggaggagaga ctacgacaca aggacgtgtc tttttgattt cgcttcctac
      301 ggtcgggtct aaggagacca gatagattcc gccgcgtact accatatcca ttctttatcc
      361 gcttcgtttt caatttcgga aaaaaaaatg ctcctgctcg gtttcgacaa gcattgcggc
      421 agcttctgcc catcccctgc gaacggtagg acagcttaaa ataatattgc ccttttcaac
      481 tgtaacagcc aagctgtcta ctgcccctat ttgacccaat aatgatttgg gcagaatcac
      541 gccttgcgag tttcccattt tgcgtatgtt gagaatcata tacgtaccct atttaccagt
      601 ttatgtaata acaatgttat taccttgatg aggtagtgtc aacattgaaa aagattgcct
      661 gacagtttgt ccgatttcaa aatctccgcg acaagaatgt tttaaagcca ttcggggatt
      721 ttggggcgga tgatgccgta tgcctcggga tagtcgacgc cggtcaggta aagcccgtcg
      781 ggcatgaagg ttggtggggc tttgaggcgg ctgcgttctt gaatcagtgc ggcgaagcct
      841 tcgacgctga gcctgccgct gccgacataa acgagcgcgc ccatgatgtt gcgtaccata
      901 tggtgcaaaa aggcgttgcc gtgcaaatcg aggcggacga gtcctgcgct ttgggtaagg
      961 tcggcgcggt agatggtttt gacgggggat tttgcctggc actcggcggc gcggaagctg
     1021 gagaagtctt gttcgccgat caaataggcg gcagcccgac gcatcggttc gatgtcgagt
     1081 ttgaggtgtg tccagcctgc cctgtttttg agcagggggg aacggacggg ggcggattcg
     1141 agcaggtagc ggtagtgtcg tccgtatgcg tcaaatcgtg catgaaattc gggggcgacc
     1201 tgtcgagcat gcaaaacggc aattccttcg ggcaggtggg catttacgcc gcgcacccat
     1261 gcctgttggg gacggacggc agttgtgtca aagtggacga cttgggcggt ggcgtgcacg
     1321 ccggtatcgg ttctgccggc aacggtggtg gcgacaaatt ctcctgcgat ttgggcgagt
     1381 gcggtttcca atgccgtctg aacggtcggt acgccgcccg cctgtttctg ccagccgtaa
     1441 aagcggctgc cgtcatagga tagggttatt gcccagcgtt gtttttgtgc ggtatccatc
     1501 ggatttggga ttcggataaa tgttcagact gcattgtatc gcagattttg cagggaaacg
     1561 gcaaacgccc agggcgagcg gcgttgtttg gggagttggg ggggggatgc agttgctacg
     1621 aatcgctatc ctgtgaattc accctgtcag gagtgcccga atcgtcattc ccgcgcagtc
     1681 gggaatctag gacgtaaaat ctaaagaaac cattttatag tggattaaca aaaaccagta
     1741 cggcgttgcc tcgccttagc tcaaagagaa tgattctcta aggtgctgaa gcacgagtga
     1801 atcggttccg tattatttgt actgtctgcg gcttcgtcgc cttgtcctga tttttgttaa
     1861 tccactatat ccgataagtt tccgcaccga caaaactaga ttcccacttt cgtgggaatg
     1921 acgggat
//
LOCUS       DBBZXU010000182         1906 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.182, whole genome shotgun sequence.
ACCESSION   DBBZXU010000182 DBBZXU010000000
VERSION     DBBZXU010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1906)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1906)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1906
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.182"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..196)
                     /locus_tag="ACJJDE_002060"
     CDS             complement(<1..196)
                     /locus_tag="ACJJDE_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541915.1"
                     /translation="MAERCRPGAKVQHSAAGGAHACRGKENREKRRAETLPEEKADLR
                     GGKRGMRRAESACVGRKGVII"
     gene            389..1807
                     /locus_tag="ACJJDE_002061"
     CDS             389..1807
                     /locus_tag="ACJJDE_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017629153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HGG7541916.1"
                     /translation="MNIHTLLSKQWTLPPFLPKRLLLSLLILLAPNAMFWVLALLTAT
                     ARPIVNLDYLPAALLIALPWRFVKIAGVLAFWLAVLFDGLMMVIQLFPFMDLIGAINL
                     VPFILTAPAPYQIMTGLLLLYMLAMPFVLQKAAAKTDFRHIAACAAVVAAAGYFTGHL
                     SYYDRGRMANIFGANNFYYAKSQAMLYTVSQNADFITAGLVDPVFLPLGNQQRAATHL
                     NEPKSQKILFIVAESWGLPANPELQNATFAKLLAQKDRFSVWESGSFPFIGATVEGEM
                     RELCAYGGLRGFALRRAPDEKFARCLPNRLKQEGYATFAMHGAGSSLYDRFSWYPRAG
                     FQEIKTAENLIGKKTCAIFGGVCDSELFGEVSAFFKKHDKGLFYWMTLTSHADYPESD
                     IFNHRLKCTEYGLPAETDLCRNFSLHTQFFDQLADLIQRPEMKGTEVIIVGDHPPPVG
                     NLNETFRYLKQGHVAWLHFKIK"
BASE COUNT          407 a          618 c          445 g          436 t
ORIGIN      
        1 aaattataac ccccttcctg ccgacgcacg cactttccgc gcggcgcatt ccccttttcc
       61 cgcccctcaa atccgccttt tcttcaggca gggtttcagc ccgcctcttt tccctgtttt
      121 cctttccccg acacgcgtgc gcgccccctg ccgcactgtg ctgcactttc gcgcccggac
      181 ggcatcgttc cgccatccgg ttctctgttt taaatacccc tgtttcagaa agaaatgcag
      241 atgtttcaac acacaggacg acacataaag caccgcccta tgtgttgccc tgatttggaa
      301 ggggttacgc ctcccaaata aagtctgatc ctgccgcccc gaaggacaga tgtccgagtg
      361 gcgaagtttc aaccgaaaag gaaatacgat gaatattcac accctgctct ccaaacaatg
      421 gacgctgccg ccattcctgc cgaaacggct gctgctgtcc ctgctgatac tgctggcccc
      481 caatgcaatg ttttgggttt tggcactgct gaccgccacc gcccgcccga ttgtcaattt
      541 ggactatctt cccgccgcgc tgctgatcgc cctgccttgg cgtttcgtca aaattgccgg
      601 cgtattggcg ttttggctgg cggttttgtt tgacgggctg atgatggtga tccagctctt
      661 cccttttatg gacctcatcg gcgccatcaa cctcgtcccc ttcatcctga ccgcccccgc
      721 cccttatcag ataatgaccg ggctgttgct gctgtatatg ctggcgatgc cgtttgtgtt
      781 gcagaaagcc gccgccaaaa ccgacttccg acacattgcc gcctgtgccg ccgttgtggc
      841 ggcagccggc tatttcactg gccatttgag ttactacgac cgggggcgga tggccaatat
      901 cttcggcgca aacaacttct actacgccaa aagtcaggcg atgctctaca ccgtcagcca
      961 gaatgccgac tttattaccg ccggcctggt cgatcccgtc ttcctcccct tgggcaatca
     1021 acagcgtgcc gccacgcatc tgaacgagcc gaaatctcaa aaaatcctct ttatcgtcgc
     1081 cgaatcttgg gggctgccgg ccaatcccga acttcaaaac gccacttttg ccaaactgct
     1141 ggcgcaaaaa gaccgttttt cggtttggga aagcggcagt tttcccttta tcggcgcgac
     1201 ggtcgaaggc gaaatgcgcg aactgtgtgc ctacggcggt ttgcgcgggt tcgcactgcg
     1261 ccgcgcgccc gacgaaaaat ttgcccgctg cctccccaac cgtttgaaac aagaaggtta
     1321 cgccaccttt gcgatgcacg gcgcgggcag ttcgctttac gaccgcttca gctggtatcc
     1381 gagggcgggc tttcaagaaa tcaaaaccgc cgaaaacctg atcggtaaaa aaacctgcgc
     1441 cattttcggc ggcgtgtgcg acagcgagct gttcggcgaa gtgtcggcat ttttcaaaaa
     1501 acacgacaag ggactgtttt actggatgac gctgaccagc cacgccgact atcccgaatc
     1561 cgacattttc aaccacaggc tcaaatgcac cgaatacggc ctgcccgccg aaaccgacct
     1621 ctgccgcaat ttcagcctgc acacccaatt cttcgaccaa ctggcggatt tgatccaacg
     1681 ccccgaaatg aaaggcacgg aagtcatcat cgtcggcgac catccgccgc ccgtcggcaa
     1741 cctcaatgaa accttccgct acctcaaaca ggggcacgtc gcctggctgc acttcaaaat
     1801 caaataacaa caatgccgtc tgaacgcacc aacagccttc agacggcatt ttgcagacag
     1861 accgaccctt caagcccact tttttcatca tctccgataa attgct
//
LOCUS       DBBZXU010000183         1889 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.183, whole genome shotgun sequence.
ACCESSION   DBBZXU010000183 DBBZXU010000000
VERSION     DBBZXU010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1889
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.183"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(159..590)
                     /locus_tag="ACJJDE_002062"
     CDS             complement(159..590)
                     /locus_tag="ACJJDE_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002237330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541917.1"
                     /translation="MKNNIFLNLNKKSINNNHFVISIFFETIYQFETKDTLLECFKNI
                     TTTGHFGVIGAQYEKIDATRWIGDYEEVNGFEYIDKAPSIYFSVGDDFNPEELIIPIN
                     LAYHYFNIAISDFLIAHPEYQKKCKEIQKTYSQTNCSLHET"
     gene            complement(606..>1889)
                     /locus_tag="ACJJDE_002063"
     CDS             complement(606..>1889)
                     /locus_tag="ACJJDE_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7541918.1"
                     /translation="NTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGA
                     IGAAVGEIVGEALTNGKNPDTLTAKEREQILAYSKLVAGTVSGVVGGDVNAAANAAEV
                     AVKNNQLSDKEGREFDNEMTACAKQNNPQLCRKNTVKKYQNVADKRLAASIAICTDIS
                     RSTECRTIRKQHLIDSRSLHSSWEAGLIGKDDEWYKLFSKSYTQADLALQSYHLNTAA
                     KSWLQSGNTKPLSEWMSDQGYTLISGVNPRFIPIPRGFVKQNTPITNVKYPEGISFDT
                     NLKRHLANADGFSQKQGIKGAHNRTNFMAELNSRGGRVKSETQTDIEGITRIKYEIPT
                     LDRTGKPDGGFKEISSIKTVYNPKKFSDDKILQMAQNAASQGYSKASKIAQNERTKSI
                     SERKNVIQFSETFDGIKFRSYFDVNTGRITNIHPE"
BASE COUNT          509 a          366 c          332 g          682 t
ORIGIN      
        1 ggtgtcttca gcacgcacgc gtctgggcag tatataggga atctgaatat ttacttgcat
       61 aacaaatgcc gtctgaaaaa ttgtgagctt ttcagacggc attgagctgt aaatcatgga
      121 acgcgtgcgt gctgaagcac acaccttacg catggatttt aggtttcatg caggctacag
      181 tttgtttgag aatatgtttt ttgtatttct ttacactttt tttgatattc agggtgagct
      241 attaagaaat cagatattgc aatattaaag taatgatatg ctaaattaat aggtataatt
      301 aattcttcag gattgaaatc atctccaact gaaaaataaa tagaaggagc tttatcaata
      361 tactcaaatc catttacctc ttcataatct ccaatccatc tggtagcatc tattttttca
      421 tattgagcac ctattactcc aaaatgtccg gtagttgtaa tatttttaaa acactctaaa
      481 agcgtatctt tagtttcaaa ttggtaaatt gtttcaaaaa aaatcgaaat aacaaaatgg
      541 ttgttattta tagatttttt atttaagttt agaaaaatat tatttttcat aatttttcct
      601 ttaaattatt ctgggtgaat gtttgtaatt cttcctgtat ttacatcaaa atatgatcta
      661 aatttgattc cgtcaaaggt ttctgagaat tgaatgacat tttttctttc cgatattgat
      721 ttagttcttt cattttgagc aattttagag gcttttgaat atccttgtga agcagcattt
      781 tgagccattt gaagtatttt atcatcagaa aattttttag gattataaac agtttttata
      841 cttgaaattt ccttaaatcc accatcaggt ttacctgtcc tgtctagtgt aggaatctca
      901 tatttaattc gggtaatgcc ttcaatatca gtttgggttt cagattttac gcgtcctcct
      961 cgtgaattta gttctgccat aaaattggtg cggttatggg ctcctttaat gccctgtttt
     1021 tgactaaaac catcagcatt tgccagatgt ctttttaggt ttgtatcgaa actgatgcct
     1081 tccgggtatt tgacattagt aataggtgta ttttgtttta caaaccctct tggtattgga
     1141 atgaatctag gattaactcc tgaaataagt gtataacctt ggtcggacat ccattcggat
     1201 aaaggctttg tattgcccga ttgaagccaa gatttagcag cagtattcaa atgataagac
     1261 tgtaaagcca aatctgcttg ggtgtaagat ttgctgaata atttatacca ttcatcatct
     1321 ttaccaatta gacctgcttc ccaagatgaa tgaaggcttc tactatcgat caaatgttgt
     1381 tttctgattg ttctacattc agtactacgg gatatatccg tacatattgc aatcgaagca
     1441 gcaagtcttt tatcagcaac attttgatac ttttttacag tattttttct gcacagttga
     1501 ggattattct gtttggcgca tgcagtcatt tcgttatcaa attctctacc ctctttgtcg
     1561 ctaagctgat tatttttcac cgctacctca gccgcattcg ccgccgcatt tacatcgccg
     1621 ccgaccacac cgcttaccgt accggcaacc agtttgctgt atgccaaaat ctgttcgcgt
     1681 tctttagctg tcaaagtgtc aggatttttg ccgtttgtca aagcctcccc gactatctcg
     1741 cccacagccg cacctatcgc accatcctga cacttgccct tattcgccgc cgctgccgca
     1801 cagcccgcta tggcatgggc aatcttgtgg actatgtagt gctgatccaa ctgtttgatt
     1861 ttactggctg cttctccatg cgcggtatt
//
LOCUS       DBBZXU010000184         1881 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.184, whole genome shotgun sequence.
ACCESSION   DBBZXU010000184 DBBZXU010000000
VERSION     DBBZXU010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1881)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1881)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1881
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.184"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..747
                     /gene="mafB"
                     /locus_tag="ACJJDE_002064"
     CDS             <1..747
                     /gene="mafB"
                     /locus_tag="ACJJDE_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin MafB class 1"
                     /protein_id="HGG7541919.1"
                     /translation="IKLNPTDTRSIRQRISDNYSNLGSNFSDRADEANRKMFEHNAKL
                     DRWGNSMEFINGVAAGALNPFISAGEAVDQWMQENPNAAETVEALVNVLPFAKVKNLT
                     KAAKPGKAAVSGDFSDSYKHNTASRLSQSVDGEMFQTRNVDFKAKSIGTKIHDGAQGK
                     HISGHRNYIEGKSTLNQNINPQELLNGIHSGAYPVISKGARGNPVVDFGYPIGSDGKS
                     GLSTNFGTIHSGKNGVHIVPANPKTIKKVQ"
     gene            750..1067
                     /locus_tag="ACJJDE_002065"
     CDS             750..1067
                     /locus_tag="ACJJDE_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541920.1"
                     /translation="MNILPSWLRVGMNIAMLGMIHSDIRLITVDYEEGRRFLKIKNYL
                     SREAITEDHEDMEYLITELWSMCGEYFDEADFECIYSNHSSMELNQINGAVFRRKELI
                     SQA"
     gene            1231..1877
                     /locus_tag="ACJJDE_002066"
                     /pseudo
     CDS             1231..1877
                     /locus_tag="ACJJDE_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016670623.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polymorphic toxin-type HINT domain-containing
                     protein"
BASE COUNT          633 a          397 c          414 g          437 t
ORIGIN      
        1 atcaaactca atccgaccga cacccgcagc atccggcaac gcatatccga caattacagc
       61 aacctcggca gcaatttctc cgaccgcgcc gatgaagcca acagaaaaat gttcgagcac
      121 aatgccaagc tcgaccgctg gggcaacagc atggagttta tcaacggcgt cgccgccggc
      181 gcgctcaacc cctttatcag cgcgggcgaa gccgttgacc agtggatgca ggaaaacccc
      241 aatgccgccg aaaccgtcga agccctggtc aacgtcctgc cgtttgccaa agtcaaaaac
      301 ctgacaaagg cggcaaaacc ggggaaggct gcggttagtg gggatttctc agactcctac
      361 aagcataaca ctgcttcaag attatctcag tctgtagatg gagaaatgtt tcaaacccgc
      421 aatgttgatt ttaaagcaaa atctattggg actaaaattc atgatggagc tcaagggaaa
      481 catatttcag gacatagaaa ctacattgaa ggtaagagta ctttaaatca aaacattaat
      541 cctcaagaat tgttgaacgg aatacattca ggtgcttatc cagttatttc taaaggagca
      601 agaggaaatc ctgttgttga ttttgggtat cctataggca gcgatgggaa atcaggatta
      661 agtaccaatt ttggtacgat tcattcaggt aaaaatggag ttcacattgt tccggctaac
      721 cctaaaacca ttaaaaaggt gcaatagtta tgaatatatt accaagctgg ctgcgagtcg
      781 gtatgaatat agcaatgctg ggcatgatac actcagatat caggttaatt accgtagatt
      841 acgaggaagg aagaaggttt ttaaaaatca aaaattattt atcaagagaa gccatcacag
      901 aagaccatga agatatggaa tatttgatta cagagttatg gtctatgtgt ggagaatatt
      961 ttgatgaagc tgactttgaa tgtatttatt ctaatcattc ttctatggag ttaaaccaaa
     1021 taaatggtgc agtattcagg agaaaggaat taatttcgca agcgtaggtt aaaaaaccaa
     1081 caatcacaat gtcttctgaa accgtgttta attttcagac ggcatttcct tcgtttgaaa
     1141 taggatattg agaactgagt tcttcaaaaa tcctacactt gctccttcca cggcagcacc
     1201 ttggtcaaaa cggcagacgg ctgaaaagcc attgcccgta tccgaaccgg cgaccgcgtc
     1261 ttcgccaagg acgaggcaag cggaaaaacg ggatacaaac ccgttaccgc ccgatacggc
     1321 aatccgtatc aagaaaccgt ttacattgaa atttcagacg gcatcggtaa aatacagacc
     1381 ctcgtttcca ataaaatcca cccgttttac agtcaaggaa agtggataca ggcaggtcgt
     1441 ctgaaaaaag gcgacaccct gctttccgaa agcggtgcaa aacagacggt tcaaaacatt
     1501 accctcaaac agcagccgct caaagcctac aatctgaccg ttgccgactg gcatacctac
     1561 ttcgtcaagg gtaatcaggc ggaacggaag gggtttgggt tcataatgcg tgtccgccaa
     1621 gaaaaacacc atctaccccc gtatatggga atgattcaga agcatatgca gcagcaaaga
     1681 aattgggata tagaaaaata aaagaaagaa cgagaaatga tgctgctatt tttaaaaaag
     1741 gaaagagtta tatatcacgc gatgtagatt cacataatgg aggggcttgg aaagaagcat
     1801 cttcacccaa gaagctgaac agaaaagaaa caagaaacgg tacatttgat aaaaacctaa
     1861 atcgtattgg agattaatta t
//
LOCUS       DBBZXU010000185         1854 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.185, whole genome shotgun sequence.
ACCESSION   DBBZXU010000185 DBBZXU010000000
VERSION     DBBZXU010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1854
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.185"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..124)
                     /locus_tag="ACJJDE_002067"
     CDS             complement(<1..124)
                     /locus_tag="ACJJDE_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541921.1"
                     /translation="MSTFFQQTSQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQ"
     gene            180..593
                     /locus_tag="ACJJDE_002068"
                     /pseudo
     CDS             180..593
                     /locus_tag="ACJJDE_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fe(3+)-pyochelin receptor"
     gene            736..1794
                     /gene="dinB"
                     /locus_tag="ACJJDE_002069"
     CDS             736..1794
                     /gene="dinB"
                     /locus_tag="ACJJDE_002069"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HGG7541922.1"
                     /translation="MSSRKIIHIDMDAFYASVELREQPHLKGRPVVVAWEGARSVICA
                     ASYEARQFGLHSAMSVATAKRLCPQAVYVPPHFDLYRQVSAQIHAVFRRYTDLIEPLS
                     LDEAYLDVTRNFKNIPYASEVAKEIRAAIFAETGLTASAGIAPNKFLAKIASDWRKPN
                     GQFVLPPHKVMAFLETLPLGKIPGVGKVTLKKMQSLGMRTAGDLRRFERGELLNHFGR
                     YGYRLYDLARGTDERPVKAERERLQISTEITLPEDLPLEQAAGHLPHLAEDLWRQITR
                     KNVEAQSVTLKLKTYDFRIITRTLTYSSVLPDCASLLQAAQMLMARVPPQTEDAFRLI
                     GIGVGHLVPKNQQQDLWA"
BASE COUNT          436 a          494 c          511 g          413 t
ORIGIN      
        1 tttgacggtt caggtattgt tcgattggct gccaatcaat cacttgatcc aacttcaata
       61 gagggaagcg gtcgatgtgt ttggcaatca tggcttggga ggtttgctgg aagaaggtgc
      121 tcatggaaaa tcccctaaat ggcttggtgg gaatttaggg gattttgggg aattttgcaa
      181 aggtctcagg ttatacctac aacaagagca ggtataggaa tgcagccgaa gtcaacgccg
      241 aacgccttgc caaaaattcc agtgcagacc cgtacaactt cagcaatttc acacccgtgc
      301 atatattccg tttcggaacg agtttccata taccgaatac ggggctgacc gtcggcggcg
      361 gcgtgtccgc acaaagcagc acaagcagcc tgtacaacat caggcagggc ggctacgggc
      421 tgatagacgg tttcgtccgt tacgaattgg gcaaacacgc caaattgagc ctcatcggta
      481 cgaacttaaa cggacgcact tattttgaga acaactacaa ccgtacgcgc ggcgcaaaca
      541 acttctatgg agagccgcgc actgtcagca tgaaactgga ttggcagttt taattgaaaa
      601 ccgtagtttt gcggatgccg tctgaacagg gtatgtttca gacggcattt ttatggaggc
      661 aggcctatcg gggcgtatat ttggaatttg ctcgatgccg gcagtagaat atccttttta
      721 tcttcagcag agccgatgtc ttcacgcaaa atcatccaca tcgacatgga cgcgttctac
      781 gcatcggtag agctgcgcga acagccgcat ttgaaagggc ggccggtggt cgtcgcgtgg
      841 gagggcgcgc gttcggtgat ttgcgccgca tcgtatgagg cacggcagtt cgggctgcat
      901 tccgcgatgt cggtggcaac ggcgaaaagg ctgtgtccgc aagcggtgta tgtgccgccg
      961 catttcgatt tgtaccgtca ggtttccgcg cagattcacg ccgtattcag gcgttatacc
     1021 gatttaatcg aacccttgtc gctggacgaa gcctatcttg acgttacccg taatttcaaa
     1081 aacatccctt acgccagtga agttgccaaa gaaatccgtg ccgccatttt tgcggaaaca
     1141 ggtttgactg catccgcagg catcgcgccg aacaaatttc tggcgaaaat cgcgtcggac
     1201 tggcgcaagc cgaacgggca gtttgtgttg ccgccgcaca aagtcatggc atttttggaa
     1261 accctgcctt tgggcaaaat ccccggcgtg ggcaaggtaa cgctgaaaaa aatgcagtcg
     1321 ctgggtatgc ggacggcggg cgacttgcgc cgtttcgagc gcggcgagct cttaaaccat
     1381 ttcggacgct acggctaccg cctctatgat ttggcgcgcg gtacggacga acgccccgtc
     1441 aaagccgaac gcgaacgcct ccaaatctcc acagaaatta ccctgcccga agacctgccg
     1501 ctcgagcagg ctgccggaca cctcccccat cttgccgaag acttgtggcg gcaaatcacg
     1561 cgcaaaaacg tcgaagccca aagtgtaacg ctcaagctga agacctacga tttccgcatc
     1621 atcacgcgca cgctgactta ttcctccgta ttgcccgact gcgcctccct gcttcaggcg
     1681 gcgcaaatgt tgatggcgcg cgtcccgccg cagacggaag acgcgttccg ccttatcggt
     1741 atcggcgtgg ggcatcttgt gccgaaaaac cagcagcagg atttgtgggc gtaaaccgct
     1801 ttacgcgcgc cgtccaaaaa atatgccgtc tgaacggttt tcagacggca tggc
//
LOCUS       DBBZXU010000186         1852 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.186, whole genome shotgun sequence.
ACCESSION   DBBZXU010000186 DBBZXU010000000
VERSION     DBBZXU010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1852
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.186"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..202)
                     /locus_tag="ACJJDE_002070"
     CDS             complement(<1..202)
                     /locus_tag="ACJJDE_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541923.1"
                     /translation="MNIIGKLKEAASYFLTKLIGENPSNEQVNRALIQMPNVRPIHTY
                     PRPNLRNSGVAAAKRAARKRKNR"
     gene            complement(199..744)
                     /locus_tag="ACJJDE_002071"
     CDS             complement(199..744)
                     /locus_tag="ACJJDE_002071"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012221570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HGG7541924.1"
                     /translation="MGKTVTLTAGHSNTDPGAVNGSDREADLAQDMRNIVASILRNDY
                     GLTVRTDGEGKGNMPLRDAVKLIRGSDVAIEFHTNAAVSKAATGIEALSTVKNKRWCQ
                     VLSKAVAKKTGWKLRGEDGFKPDNAGQHSRLAYAQAGGIVFEPFFISNDTDLALFKTT
                     KWGICRAIADAIAMELGAARV"
     gene            complement(901..1329)
                     /locus_tag="ACJJDE_002072"
     CDS             complement(901..1329)
                     /locus_tag="ACJJDE_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mor transcription activator family protein"
                     /protein_id="HGG7541925.1"
                     /translation="MAFEKVEHLLPDTVLDIVDVIGLAATEQLVKAIGGARFKFGKGK
                     VDTERLAILVEAIGEVKTHELLQVYGGEELYVPRCGKALIQLRNHRFYQEFVKLRDID
                     KESGLMAMTKLCPKYGISSRTGYTIINEMSRPAAQQAALF"
     gene            complement(1310..1744)
                     /locus_tag="ACJJDE_002073"
     CDS             complement(1310..1744)
                     /locus_tag="ACJJDE_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gp16 family protein"
                     /protein_id="HGG7541926.1"
                     /translation="MRRALIAKIKIAQKELGLDDGTYRAVLERVTGKRSCADMDVSEL
                     ESVVADMRSHGFKPKAKGNPHGKPHLRRTSSAAMLDKVEALLTVGGKHWNYAHAMARR
                     MFGKDKVEYLDDTQLHKLVAALQIAENRKTEKAGGDDGVRKS"
BASE COUNT          449 a          534 c          381 g          488 t
ORIGIN      
        1 gacgattctt gcgtttgcgc gccgcgcgtt tggctgccgc cacgcctgag tttcttaaat
       61 ttgggcgtgg ataggtgtgt atcggacgaa catttggcat ctgtataagt gcgcggttta
      121 cctgctcatt actaggattt tctccaatca attttgtaag aaaataggaa gcagcttctt
      181 tcaatttacc aataatattc atactcttgc cgcccccaat tccatcgcaa tcgcgtccgc
      241 aatcgcgcgg cagatgcccc atttagtagt cttaaacaag gctaaatcag tgtcgttgct
      301 gataaaaaac ggctcaaaca caatgccgcc ggcttgtgca taagccaggc gcgaatgctg
      361 gcccgcattg tcgggtttaa agccgtcttc gccgcgcagt ttccagccgg ttttcttggc
      421 aacagctttg ctcaacacct gacaccagcg tttgttttta acggtactca aggcttcgat
      481 gcctgtcgcc gctttgctga cggcagcgtt ggtgtgaaac tcaatcgcca catccgagcc
      541 gcgaatcagc ttgaccgcat cgcgcaaggg catattgcct ttgccttcgc cgtcggtgcg
      601 tacggtcagg ccgtaatcgt tacgcaggat tgaagccacg atgttgcgca tatcctgcgc
      661 caagtccgcc tcacggtcgc ttccgttgac cgcgcccggg tcggtgttac tgtgtccggc
      721 ggttaaagtt acagttttgc ccattcatca tctccaaaaa atattgattg cataacattt
      781 gaaaacccca ttaaaccgtc tttaacccat cgtcccgaac ggtagatgtt tcatccccta
      841 caaaccaaaa aaaaagaccg tctgaataca gacggccaaa gcctggtcac acatcactgc
      901 ctaaaataaa gctgcctgct gtgccgcagg tcggctcatt tcattgataa tcgtatatcc
      961 tgttcgtgaa gagataccgt atttagggca tagcttcgtc atcgccataa gcccgctctc
     1021 cttatcaata tcgcgcaatt tgacaaactc ctgataaaac ctatggtttc tcaactgtat
     1081 taacgccttg ccgcaccgtg ggacatacaa ttcctcgcca ccatatacct gcaacagctc
     1141 atgtgttttc acttcgccga tggcttcgac caaaattgcc aaacgctcgg tgtccacctt
     1201 gcccttacca aatttaaacc gcgccccgcc aatcgccttg accagctgtt ccgtcgctgc
     1261 cagtccgatg acatccacaa tgtccaacac ggtatccggc aataaatgtt caactttttc
     1321 gaacgccatc atccccaccc gctttttccg ttttcctgtt ttccgcaatc tgcaacgcag
     1381 caaccagttt atgtagctgc gtatcgtcta aatattcgac cttatcctta ccaaacatcc
     1441 gccgcgccat tgcgtgtgca tagttccaat gtttgccgcc gacggtcagc agggcttcga
     1501 ctttgtccaa cattgccgct gatgatgtcc gacgcagatg cggtttgccg tgtgggttac
     1561 cttttgcttt aggcttaaat ccgtgcgacc gcatatcagc gacaacagac tcaagttcgg
     1621 aaacatccat atccgcacac gaccgcttgc ccgtcacacg ctccaacacc gcgcgatagg
     1681 taccgtcgtc caagcccagc tccttttgag caatcttaat tttcgcaatc aacgcccggc
     1741 gcatctcaaa cccataaaac acaatatatt gactaattaa cgcatattat accaataaaa
     1801 tacaatatat agtattaagc cgatgttttt tgcgaaacgg acagacataa aa
//
LOCUS       DBBZXU010000187         1799 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.187, whole genome shotgun sequence.
ACCESSION   DBBZXU010000187 DBBZXU010000000
VERSION     DBBZXU010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1799)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1799)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1799
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.187"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..1691
                     /locus_tag="ACJJDE_002074"
     CDS             <1..1691
                     /locus_tag="ACJJDE_002074"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541927.1"
                     /translation="PYAVRFRLNQILPELDCHWQENLTEIFKTLSPEAGQAACTQILS
                     RKGIGYNEADGSFTYLPQKRISFSSLATDIPIPDLKRLAGHIAERLDVLAQCESPVYI
                     ADILESVLSVIKNVDTGGKRARENFKQILKTEFIYAAAAVLKNKTKWEIPENTRNLDS
                     DIICTYICEVFLKSHLLGNSFPMMRPREVKQMPEPVFDKVLFAEQRARQLEVIRTSKY
                     IFAIAPYYTDDIPFSLRRFLSEDKLYTSYNRYYTAIHIPVRNITQNDALRFANGLKQI
                     LSLQSGVSWEIIDMMDRIEENYDKKALPLLFSPFPAQVERTQAIAARLDQFERLLGDT
                     VLDPFYYCLTRMAKGEEDLKYIYIAFRQSFGGIFNSFENFRLLPALWMSRDAENMSDR
                     MNAYISAMEDRRREILSIRQGKPEEEFSRKMVVCLIDLENCLEKHLEQFKPVSESIEA
                     CTAKLQEQPSFFNRLMKTNDKLNRQIDVLQKQSAAIHNEAYIEMNTLLYRHREVVSVH
                     NRKADYAEKGKEQIALFPRGLNGITKLPAAVLLPERPYHFDMKEVLHIFSWIPR"
BASE COUNT          465 a          504 c          422 g          408 t
ORIGIN      
        1 tcccttacgc cgtccgtttc aggctcaatc aaatccttcc cgaactcgac tgccattggc
       61 aggaaaatct gacagaaatc ttcaaaacac tttctcccga agccgggcag gccgcctgta
      121 cgcaaatcct ttcccgaaaa ggcataggct ataacgaagc cgacggttct tttacttacc
      181 ttccccaaaa acgcatttcg ttttcttctt tggcaacaga cattcccatc cccgacctca
      241 aacggctggc ggggcatatt gcggaacgcc tggatgtatt ggcgcaatgc gaatcgccgg
      301 tttatattgc cgacattctc gaaagcgtgc tgtccgttat caaaaacgtc gataccggag
      361 gcaagcgcgc acgggaaaat ttcaaacaga ttctgaaaac cgaattcatc tacgccgccg
      421 ctgcggtatt gaaaaacaaa accaaatggg aaatccccga aaatacccgc aatctcgatt
      481 cggacatcat ctgtacctat atctgcgaag tgttcctaaa atcgcacctg ctcggcaaca
      541 gttttccgat gatgcgcccg cgcgaagtga agcagatgcc cgaaccggtg tttgacaaag
      601 tattgtttgc cgaacagcgc gcccgccagt tggaagttat ccgaacgtca aaatacatct
      661 tcgccatcgc gccttattac accgacgata ttccgttttc cctgcgccgc ttcctgtcgg
      721 aagacaaact ttataccagc tacaaccgct attacaccgc catccatatc cccgtccgca
      781 acatcactca gaatgatgcc ctgcgttttg ccaacggttt gaaacagatt ctctcgctgc
      841 aatccggcgt gagctgggaa atcatcgata tgatggacag gatagaggaa aactacgaca
      901 aaaaagccct gccgctgttg ttttcgccat tccccgcgca agtcgaacgc acgcaggcga
      961 ttgccgccag attggaccaa ttcgagcggc tgttgggcga caccgtcctc gatccgttct
     1021 actattgcct gacgcgtatg gcgaagggcg aggaagattt gaaatatatt tatatcgcct
     1081 tccgccagtc tttcggcggc atcttcaatt cgtttgaaaa cttccgcctg ctgcccgcgc
     1141 tgtggatgag cagggatgcg gaaaatatgt ccgaccgcat gaacgcctat atttccgcaa
     1201 tggaagaccg ccgccgcgag atattgtcca ttcggcaggg aaagcctgaa gaagaatttt
     1261 cccgcaagat ggtcgtctgc ctgatcgact tggaaaattg tttggaaaaa cacctcgaac
     1321 agttcaagcc ggtatcggaa agcatcgaag cctgtaccgc caaactgcag gagcaaccgt
     1381 cgttcttcaa caggctgatg aaaaccaacg acaagctcaa caggcagatt gacgtgttgc
     1441 agaaacagtc ggcagccatc cacaacgaag cctatatcga aatgaacacg ctgctttacc
     1501 gccaccgcga agtggtttcc gtccacaacc gcaaagcaga ttatgcggaa aagggcaaag
     1561 agcagattgc gctgttcccg cgcggattga acggcatcac caagctgccc gccgccgtcc
     1621 tgttgcccga gcgtccctac cattttgata tgaaggaggt tctgcatata ttctcctgga
     1681 taccgaggta ggcgtatcgg ctgccggata aaaatgcacc ccgtcattcc tgtctgtacg
     1741 ggggtagcgg cagtgttttc ctgcttcgtt ttatagtgga ttaacaaaaa ccagtacgg
//
LOCUS       DBBZXU010000188         1790 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.188, whole genome shotgun sequence.
ACCESSION   DBBZXU010000188 DBBZXU010000000
VERSION     DBBZXU010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1790)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1790)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1790
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.188"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(148..804)
                     /locus_tag="ACJJDE_002075"
     CDS             complement(148..804)
                     /locus_tag="ACJJDE_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002213545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HGG7541928.1"
                     /translation="MKNKTKVWDFPTRLFHWLLAASLPFMWYSAKTGGDMLQWHTRVG
                     LFILFLLVFRLCWGIWGSDTARFSRFVRGWSGIREYMKNGIPEHVQPGHNPLGALMVV
                     ALLAAVSFQVGTGLFAADENTFSTNGYLNHLVSEHTGSLMRKIHLNFFKLLAVFSAIH
                     IAAVAAYRVFKKKNLVLPMITGFKYIEGKTSIRFAGKTALAAALSVAALAAAAILLLS
                     "
     gene            869..1759
                     /locus_tag="ACJJDE_002076"
     CDS             869..1759
                     /locus_tag="ACJJDE_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HGG7541929.1"
                     /translation="MFPVFHLSGESRRRMLQAASRFPYVFKARAEDSHKGTFGTLAVV
                     GGSAGMSGAPVLAASAAMYLGCGKVWAGFNQDALPFAVIAGFPEIMLDTADGLTKRQG
                     INAWMVGCGLGTDKAAVGTLAGILAEHTDKPVLLDADALNILSTDAETRNLARGCKNL
                     ILTPHPAEAARLLGTTVAQVQADRTAAVRKIGAIFGATVVLKGHKTLVAASDTEIYVN
                     ESGNAGLATAGSGDVLGGIIGSLLAQGVPVFEAACAGAWLHGAAADVIKESAGIAAGL
                     LAGEIAPAARWLRNRITKSM"
BASE COUNT          402 a          421 c          588 g          379 t
ORIGIN      
        1 ccttgtcctg atttttgtta atccactata aaacggtttg ggacggaaaa acggcctgaa
       61 gccgtttcgg gcattcagac cgtttgcgcg gagaggggat gccgtccgaa gggcgaaaag
      121 ggcttcagac ggcattgatg tcgggtttca ggacaggagc aggatggcgg ctgcggcaag
      181 cgcggcaacc gataatgcgg cggcaagcgc ggttttgccg gcaaagcgga ttgaggtttt
      241 gccttcgatg tatttgaagc cggttatcat cgggaggacg aggtttttct ttttgaacac
      301 gcggtatgcg gcgacggcgg cgatatgaat ggcggaaaaa acggcgagca gcttgaaaaa
      361 gttgaggtgg attttccgca taaggctgcc cgtatgctcg gaaaccaaat ggttgaggta
      421 gccgttggtg ctgaaggtgt tttcatcggc ggcaaaaagc cctgtgccga cttgaaatga
      481 gacggcggcc aaaagcgcga cgaccatcag tgcgcccaag gggttgtgtc cgggttggac
      541 gtgttcggga ataccgtttt tcatatactc tctgataccc gaccatccgc ggacgaaacg
      601 ggagaaacgg gcggtatcgc tgccccaaat gccccagcag aggcggaata cgagcaggaa
      661 aaggataaac agcccgacgc gcgtgtgcca ttgcagcata tcgccgccgg ttttcgcgct
      721 ataccacata aagggtaggg atgcggcaag cagccagtgg aaaaggcggg tggggaagtc
      781 ccagactttg gttttgtttt tcataattgg tttccggcgg tagaatcggt ttgttttcga
      841 gccttaattt taaccgattg gaggggaaat gtttcccgtt ttccatcttt caggcgaaag
      901 ccgccgccgg atgcttcagg cggcatcgcg ttttccctat gttttcaaag cccgtgcgga
      961 agattcgcac aaagggactt tcggcacgct cgccgtagtc ggcggatcgg cagggatgag
     1021 cggcgcgccc gtattggcgg catcggcggc gatgtatctc ggctgcggca aggtgtgggc
     1081 gggtttcaat caggatgcgc ttccgtttgc cgtcattgcc ggttttcccg aaattatgtt
     1141 ggacacggca gacggtttga ccaagcgtca aggcataaac gcttggatgg taggttgcgg
     1201 cctgggtacg gataaagcgg cggtcggaac gcttgccgga attttggcgg aacacacgga
     1261 caagcccgtc cttttggatg cggacgcgct gaacatatta tcaaccgatg ccgaaacccg
     1321 aaatctggcg cgcgggtgta aaaacctgat tttaacgcca caccccgccg aagccgcgcg
     1381 cctgcttgga acgacggttg cacaggttca ggcggatcgg acggcggcag tgaggaagat
     1441 aggggcaatt ttcggcgcaa ccgtggtttt aaaggggcac aaaacattgg ttgctgcgtc
     1501 cgatacggaa atctatgtca acgaaagcgg caacgcggga ttggcaacgg cgggcagtgg
     1561 cgacgtattg ggcggcatca tcggcagtct gctcgcacag ggcgtgccgg tttttgaagc
     1621 cgcctgcgcg ggcgcgtggc tgcacggcgc ggcggcggat gtcataaaag aatcggcagg
     1681 cattgcggca gggctgttgg caggggaaat cgctccggcg gcaaggtggc tgcgcaaccg
     1741 gataactaaa agtatgtaag aagatatagt ggattaacaa aaaccagtac
//
LOCUS       DBBZXU010000189         1737 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.189, whole genome shotgun sequence.
ACCESSION   DBBZXU010000189 DBBZXU010000000
VERSION     DBBZXU010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.189"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            97..1470
                     /locus_tag="ACJJDE_002077"
     CDS             97..1470
                     /locus_tag="ACJJDE_002077"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002238938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HGG7541930.1"
                     /translation="MSNPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLL
                     AAAQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQIDQNVQSY
                     IKNLPLRHTVLFGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLD
                     EADRMLDMGFIDDIRKIMQMLPKQRQTLLFSATFSAPIRKLAQDFMNAPETVEVAAQN
                     TTNANVEQHIIAVDTIQKRNLLERLIVDLHMNQVIVFCKTKQSVDRVTRELVRRNLSA
                     QAIHGDRSQQSRLETLNAFKDGSLRVLVATDIAARGLDIAELPFVINYEMPAQPEDYV
                     HRIGRTGRAGADGVAISLMDESEQKMFESIKELTGNKLLIERIEGFEPQWWEQGGAKP
                     EKTEMREPRQRNRYESARAQREKNTRPETTANDAGAACGKIAGRSRRSRREHRTCALL
                     QPRYGVK"
     gene            1650..>1737
                     /locus_tag="ACJJDE_002078"
     CDS             1650..>1737
                     /locus_tag="ACJJDE_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009118462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HGG7541931.1"
                     /translation="MSTQFDVAVIGAGPAGSVASALLRKKGYS"
BASE COUNT          443 a          565 c          411 g          318 t
ORIGIN      
        1 gccgccttgt cctgattttt gttaatccac tatatttccc cgtcctatcg gtttcccgtt
       61 tcagacgaca taaggtctga aagaaagact acaattatga gtaatccatt ttcctcttta
      121 ggtttgggta cggaactcgt ttccgcactg accgcgcaag gttacgaaaa cccgacgccc
      181 atccaagccg ccgccattcc caaagcactc gccggtcatg atttgctagc cgccgcgcaa
      241 accggcacag gcaaaaccgc cgcctttatg ctgcccagtc tggaacgcct caaacgttac
      301 gccaccgcca gcacctcgcc cgcgatgcac cccgtgcgta tgctcgtcct tacccccacg
      361 cgcgaacttg ccgaccaaat cgaccaaaac gtgcagtcct acatcaaaaa cctgccgctt
      421 cgccacaccg tcttgttcgg cggtatgaat atggacaaac agaccgccga tttgcgtgcc
      481 ggctgcgaaa tcgtcgtcgc caccgtcgga cggctgctcg accacgtcaa acaaaaaaac
      541 atcagtttga acaaagtcga aatcgtcgtt ctggacgaag cagaccgcat gttggatatg
      601 gggtttatcg acgacatccg caaaatcatg cagatgctgc ccaaacaacg ccaaaccctg
      661 ctcttttccg ctaccttctc cgcaccgata cgcaaactgg cgcaagactt catgaacgcg
      721 cccgaaaccg tcgaagtcgc cgcgcaaaac accaccaacg ccaacgtcga acaacacatc
      781 atcgccgtcg ataccattca gaagcgcaac ctgctcgaac ggctgattgt cgatttgcat
      841 atgaaccagg tcatcgtgtt ctgcaaaacc aaacaaagcg tcgaccgcgt aacgcgcgaa
      901 ctggtgcgcc gcaacctgtc cgcacaggcg atacacggcg accgttccca acaaagccgg
      961 ctcgaaacac tcaacgcctt caaagacggc agcctgcgcg tcctcgtcgc caccgacatc
     1021 gccgcgcgcg ggctggacat tgccgaactg cccttcgtca tcaattacga aatgcccgcc
     1081 cagcccgaag actacgtcca ccgcatcggg cgcacggggc gcgcgggcgc ggacggcgtg
     1141 gcgatttccc tgatggacga atccgaacag aaaatgtttg aatccattaa agagctgacc
     1201 ggcaacaagc tgctcatcga gcgcatcgag ggcttcgagc cgcaatggtg ggaacagggc
     1261 ggcgcaaaac cggaaaaaac cgaaatgcgc gaaccgagac aacgcaaccg ctacgaatcc
     1321 gccagggctc agcgcgaaaa aaatacccga ccggaaacca cggcaaacga tgcgggcgcg
     1381 gcttgcggaa aaattgccgg acgcagccgc cgaagccgtc gggaacaccg gacgtgcgcc
     1441 ctgctccaac cgcgttacgg cgtaaaataa ccctgaaaat caaatgccgt ctgaacattt
     1501 cccgtttcag acggcatttt tcaaaccgga ctgacgcatt gggagcaacc gcccgcaccg
     1561 gataaatttc ttccgcaaac agtttcagac ggcatttgct gcctgtacaa tatcatttcc
     1621 ttttccactc aaaccatcag gatttcccaa tgtccaccca attcgatgtc gccgtaatcg
     1681 gcgcaggtcc ggcaggctcg gtcgcatccg ccctgctccg caaaaaaggt tatagtg
//
LOCUS       DBBZXU010000190         1692 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.190, whole genome shotgun sequence.
ACCESSION   DBBZXU010000190 DBBZXU010000000
VERSION     DBBZXU010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.190"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..217)
                     /locus_tag="ACJJDE_002079"
     CDS             complement(<1..217)
                     /locus_tag="ACJJDE_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HGG7541932.1"
                     /translation="MTYANFNINGFGDVKLTPYSPLLGYKAWDSFIGSIQSLSDLIYN
                     VDNNRNKMEITVNNAIQAADSFLSSNWK"
     gene            1252..1428
                     /locus_tag="ACJJDE_002080"
                     /pseudo
     CDS             1252..1428
                     /locus_tag="ACJJDE_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219103.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin B"
     gene            1431..1692
                     /locus_tag="ACJJDE_002081"
                     /pseudo
     CDS             1431..1692
                     /locus_tag="ACJJDE_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225556.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595-like element IS1016C family transposase"
BASE COUNT          569 a          324 c          257 g          542 t
ORIGIN      
        1 tcttccaatt actgcttaaa aagctatctg cagcttgaat agcattatta acagtaattt
       61 ccattttatt tctattgtta tccacattat agattaaatc agataaggat tgaatagaac
      121 caataaatga atcccaagct ttatatccca agagtggtga atagggtgtt aatttcacat
      181 ctccaaaacc gttaatatta aaatttgcat atgtcatatc tgctttcctt tcaagtaaat
      241 taaaaaaata acgtgaggaa ttaaaattaa aaataaatta attatcgact caatataata
      301 tgaatcaatt agctctctta tggtaaatat aagaggtaaa aatactaaaa ataaactaat
      361 aaagttcaga aaaatagtaa atggaatatt ttcatatgga aaaattctac aaaatacaag
      421 taatattcca tgacatatta gcaaatgagt aaaatttatt ataaaatata taaatatttc
      481 cccatcgtaa gatatattca aataaagaaa tataaacaat atgaagtata taaaatatat
      541 tttttggcat ctaaaaaata aacttttagc aatcatatat aaatagcttg tagaataaaa
      601 aacgaaaatt attaattatc gtaggtgtgc atttattcca acacggtttc atgcagctta
      661 aaaaccaaaa attctttctc cctttatcct ttcttaaaaa tagcgttttc aaattctgca
      721 acgacaggtt tcattcaagt aggactgccg tgattgcatc aattgcttcg cggcatggca
      781 tccatatcac acaacaggac atttattctc gggtaagtcc accttcatcc tcttccgcca
      841 gcaggaacag ttacaggcta cctaaaatat gctctgtgct cggatagtaa atatttcctt
      901 tctcactatt gtttgtcatt taatcgacag tctactcttt ctctaaaatt tcgtcaataa
      961 tagttaaata tatttaaata catttaaaat aataatatac acctgtttca gtctgtctaa
     1021 aacacgggaa aatatgttat ttgatcacaa cggtgacttt gggcagcctg taccttcaat
     1081 aacgcgtgga aaatagatat atacttatat cgtattcgag gctgtcttgt ttccctcaaa
     1141 caaccattct tccacacttt tgctttacaa ttttcgtgtg tatccttaca attaccccta
     1201 ttgtttttgt atattccttt gccaaccgtt attgctatcc aatctaatat tatggctatc
     1261 gtatctacac cacaccccgc tctttccgcc ctcatcatcc tcgcccatta tcacggcatt
     1321 gccgccaaat ctttgggatt gaaggcaaag gtagtacgcc agcctgtcaa acgtttggct
     1381 atggtgacct tacctgcatt ggtatggtgt gatgacggca accattttaa ggaaaagtgg
     1441 ttgttttcgg cattctgaaa cgcaacggac gggtctatac cgttgtggtg gataatgcca
     1501 agtctgaaac gttactccct gtcatcaaaa agaaaatcat gccggacagc attgtttata
     1561 ccgatagtct gagcagctgc gacaagttgg acgtgagcgg ttttatccat taccgcatca
     1621 accattccaa ggagtgtgca gaccgtcaga accacattaa cggcattgag aacttttgga
     1681 atcaggcaaa ac
//
LOCUS       DBBZXU010000191         1690 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.191, whole genome shotgun sequence.
ACCESSION   DBBZXU010000191 DBBZXU010000000
VERSION     DBBZXU010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1690)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1690)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1690
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.191"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1690
                     /gene="frpC"
                     /locus_tag="ACJJDE_002082"
     CDS             <1..>1690
                     /gene="frpC"
                     /locus_tag="ACJJDE_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="iron-regulated protein FrpC"
                     /protein_id="HGG7541933.1"
                     /translation="DGIETVAAKGFSGSLFDHNGNGIRTATGWVSADDGLLVRDLNGN
                     GIIDNGAELFGDNTKLADGSFAKHGYAALAELDSNGDNIINAADAAFQSLRVWQDLNQ
                     DGISQTNELRTLEELGIQSLDLAYKDVNKNLGNGNTLAQQGSYTKTNGTTAKMGDLLL
                     AADNLHSRFKDKVELTAEQAKAANLAGIGRLRDLREAAALSGDLANMLKAYSAAETKE
                     AQLALLDNLIHKWAETDSNWGKKSPMRLSTDWTQTANEGIALTPSQVAQLKKNALVSL
                     SDKAKATIDAARDRIAVLDAYTGQDSNTLYYMSEEDALNIVKVTNDTYDHLAKNIYQN
                     LLFQTRLQPYLNQISFKMENDTFTLDFSGLVQAFNHVKETNPQKAFVDLAEMLAYGEL
                     RSWYEGRRLMADYVEEAKKAGKFEDYQKVLGQETVALLAKTSGTQADDILQNVGFGHN
                     KNVSLYGNDGNDTLIGGAGNDYLEGGSGSDTYVFGKGFGQDTVYNYDYATGRKDIIRF
                     TDGITADMLTFTREGNHLLIKAKDGSGQVTVQSYFQNDGSGAYRIDEIHFDNGKV"
BASE COUNT          497 a          411 c          392 g          390 t
ORIGIN      
        1 cgacggcata gaaacagtcg ccgccaaagg cttttcaggc agcctcttcg accataacgg
       61 caacggcatc cgcaccgcca ctggctgggt ttctgccgat gacggtttac tcgtccgcga
      121 tttgaacggc aacggcatca tcgacaacgg cgcggaactc ttcggcgaca acaccaaact
      181 ggcagacggt tcttttgcca aacacggcta cgcagctttg gccgaattgg attcaaacgg
      241 cgacaacatc atcaacgcgg cagacgccgc attccaatcc ctgcgtgtat ggcaggatct
      301 caaccaggac ggcatttccc aaaccaacga actccgcacc cttgaagaat tgggtattca
      361 atctttggat ctcgcctata aagatgtaaa taaaaatctc ggtaacggta acactttggc
      421 tcagcaaggc agctacacca aaacaaacgg tacaaccgca aaaatggggg atttactttt
      481 agcagccgac aacctgcaca gccgcttcaa agacaaagtg gaactcactg ccgaacaggc
      541 aaaagccgcc aatcttgcgg gcattggtcg tctgcgcgat ttgcgcgaag ctgccgcatt
      601 gtccggcgat ttggccaata tgctgaaagc ttattctgcc gccgaaacta aagaagcaca
      661 gttggcattg ttagataatt tgattcacaa atgggcggaa accgattcga actggggcaa
      721 aaaatcgcca atgcgacttt caaccgattg gacgcaaacg gctaatgaag gtattgcact
      781 gacaccatcc caagtagcac aactaaaaaa gaacgcttta gtttcccttt ctgataaagc
      841 taaagcaact attgacgccg cccgcgaccg cattgccgtg cttgatgcct acacggggca
      901 ggattccaac acactctatt acatgagcga ggaagatgcg cttaatatcg tcaaagtaac
      961 caacgataca tacgaccatc tcgccaaaaa catctaccaa aacctgttat tccaaacccg
     1021 tttgcagcca tatttgaatc aaatcagttt caaaatggaa aatgatacgt tcactttgga
     1081 ttttagtggt cttgttcaag catttaacca tgtcaaagaa actaatccgc aaaaagcttt
     1141 tgtggatttg gccgagatgc ttgcatatgg cgaacttcgt tcttggtatg aaggccgaag
     1201 actaatggcc gattatgtgg aggaggcaaa aaaagcaggt aaatttgaag attaccagaa
     1261 agtgttgggt caggagaccg ttgcattatt agctaaaaca tcgggtacgc aagcagatga
     1321 tatcctgcaa aatgtaggct ttggtcataa taaaaatgtt tctttatatg gtaatgacgg
     1381 caacgacact ctgatcggcg gtgcaggcaa tgattacttg gagggcggca gcggttcgga
     1441 tacttatgtc ttcggcaaag gcttcggtca ggatacggtc tataattacg actacgctac
     1501 cggacgcaaa gacatcatcc gctttaccga cggtattaca gccgatatgc tgacttttac
     1561 ccgagagggc aaccatcttc ttatcaaggc aaaagacggc agtggacaag tgactgttca
     1621 gtcctatttc cagaacgatg gctcaggtgc ttaccgtatc gatgagattc atttcgataa
     1681 cggcaaagta
//
LOCUS       DBBZXU010000192         1649 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.192, whole genome shotgun sequence.
ACCESSION   DBBZXU010000192 DBBZXU010000000
VERSION     DBBZXU010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.192"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(287..973)
                     /locus_tag="ACJJDE_002083"
     CDS             complement(287..973)
                     /locus_tag="ACJJDE_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002228970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:1990397 - queuosine salvage [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HGG7541934.1"
                     /translation="MYAFTDAQQQKALFRLVLFHILIIAASNYLVQFPFQIFGIHTTW
                     GAFSFPFIFLATDLTVRIFGSHLARRIIFWVMFPALLLSYVFSVLFHNGSWTGLGALS
                     EFNTFVGRIALASFAAYALGQILDIFVFNKLRRLKAWWIAPTASTVIGNALDTLVFFA
                     VAFYASSDGFMAANWQGIALVDYLFKLTVCGLFFLPAYGVILNLLTKKLTTLQTKQAQ
                     DRPAPSLQNP"
     gene            complement(1049..1522)
                     /gene="queF"
                     /locus_tag="ACJJDE_002084"
     CDS             complement(1049..1522)
                     /gene="queF"
                     /locus_tag="ACJJDE_002084"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0033739 - preQ1 synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046857 - oxidoreductase activity, acting
                     on other nitrogenous compounds as donors, with NAD or NADP
                     as acceptor [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preQ(1) synthase"
                     /protein_id="HGG7541935.1"
                     /translation="MSRNTEELQGISLLGNQKTQYPIGYAPEILEAFDNKHPDNDYFV
                     KFVCPEFTSLCPMTGQPDFATIYIRYIPHIKMVESKSLKLYLFSFRNHGDFHEDCVNI
                     IMKDLIALMDPKYIEVFGEFTPRGGIAIHPFANYGKAGTEFEALARKRLFEHDSQ"
     regulatory      complement(1526..1570)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.5"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT          421 a          361 c          497 g          370 t
ORIGIN      
        1 atacagtcga ttaaaataaa actaagccaa ggaagcactg ccgtcattcc cgtaccgtcg
       61 ggaatccgga caccacggta cggaaaccca tccgccgtca ttcccgcgaa agcgggaatc
      121 tagaaataca atgcggcagg agtttatcgg aaatgactga aacccaacgc accggattcc
      181 cgctttcgcg ggaatgacga agtgggcggg aatccggatt tatccgttcc gacagtgttt
      241 gcaaataaaa gaaaacccaa ccgtcccgat ttccggcagg gctgttttac ggattttgca
      301 gcgagggcgc ggggcggtct tgcgcctgtt tggtttgcag ggtcgtcagt tttttcgtca
      361 gcagattcag aatcacgccg taggcgggca ggaaaaacag accgcagacg gtgagtttga
      421 acaggtaatc gaccaaggcg atgccctgcc agtttgccgc cataaatcca tcgctgctgg
      481 cgtaaaaggc aacggcgaaa aataccagcg tatccaaagc gttgccgatg acggttgatg
      541 cggtcggggc aatccaccac gctttcagac ggcgtaattt gttgaacaca aaaatatcaa
      601 ggatttgtcc gagcgcgtag gcggcaaagc tggccagcgc gatgcgtccg acaaaggtgt
      661 tgaattcgga cagtgcgccc aagcccgtcc aactgccgtt gtggaacaaa acggaaaaga
      721 cataggaaag caaaagggcg gggaacatga cccaaaagat aatccgccgt gccaagtgcg
      781 aaccgaaaat gcggacggtc aggtcggtgg caaggaagat gaagggaaag gaaaacgcgc
      841 cccaagtggt gtggatgccg aaaatttgga aggggaactg caccagatag ttgctggcgg
      901 cgatgatgag gatatgaaaa agcaccagcc ggaagagtgc cttctgttgc tgtgcgtcgg
      961 taaatgcgta cataaaaaaa cctttcggaa aggcgttcag acggcatacc gtatcgaaag
     1021 aatgccgtct gaaagtggga aggacggatt attggctgtc gtgttcgaac aagcgtttac
     1081 gcgccaatgc ttcaaactcg gtgcctgctt tgccgtagtt ggcaaacgga tgaatggcga
     1141 tgccgccgcg cggtgtgaac tcgccgaata cttcgatgta tttcggatcc atcagggcaa
     1201 tgaggtcttt catgatgatg ttgacacagt cttcatgaaa atcgccgtgg ttgcggaagc
     1261 tgaagaggta gagtttcagg gatttgcttt ccaccatttt gatgtgcgga atatagcgga
     1321 tgtagatggt ggcgaagtcg ggctgcccgg tcatggggca gaggctggtg aactctgggc
     1381 agacgaattt gacgaaatag tcgttgtcgg gatgtttgtt gtcgaatgct tcgagaattt
     1441 caggcgcgta gccgatcgga tattgggttt tttgattacc caaaagcgag atgccttgca
     1501 gctcttcggt attgcgggac atagggtttc cttagttttt tagtgtggga ggttttcgaa
     1561 ccacggggcg gcgattgtaa tataagcggc ggtatctgtg tagttttctt cagacggcat
     1621 ggtttggacg gcggcgtttt ccgtgtcat
//
LOCUS       DBBZXU010000193         1558 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.193, whole genome shotgun sequence.
ACCESSION   DBBZXU010000193 DBBZXU010000000
VERSION     DBBZXU010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1558)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1558)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.193"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(280..1203)
                     /gene="lpxC"
                     /locus_tag="ACJJDE_002085"
     CDS             complement(280..1203)
                     /gene="lpxC"
                     /locus_tag="ACJJDE_002085"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HGG7541936.1"
                     /translation="MLQRTLAKSISVTGVGLHSGERVALTLHPAPENSGISFRRTDLD
                     GEMGEQIKLTPYLINDTRLSSTIVTDKGVRVGTIEHIMSALSAYGIDNALIELNAPEI
                     PIMDGSSLPFIYLLQDAGVVDQKAQKRFLKILKPVEIKEAGKWVRFTPYDGFKVTLTI
                     EFDHPVFNRSSPTFEIDFAGKSYIDEIARARTFGFMHEVEMMRAHNLGLGGNLNNAIV
                     IDDTDVLNPEGLRYPDEFVRHKILDAIGDLYIVGHPIVGAFEGYKSGHAINNALLRAV
                     LADETAYDRVEFADSDDLPDAFHELNIRTCG"
     gene            complement(1302..>1558)
                     /locus_tag="ACJJDE_002086"
     CDS             complement(1302..>1558)
                     /locus_tag="ACJJDE_002086"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541937.1"
                     /translation="EVTRNLKQVKPNEPDFHFRGNDGMQVSVFGFMFWFFVLVGMTVH
                     AKMLSERFSDGIFCVFREGRLRRLVLIFVNPLYIFMRLTY"
BASE COUNT          408 a          392 c          378 g          380 t
ORIGIN      
        1 atccatccat acggaaacct gcaccacgtc attcccacga acctacatcc cgtcattccc
       61 acaaaaacag aaacctcaaa tcccgtcatt cccgcgcagg cgggaatcca gacttgtcgg
      121 tgcggacgct tatcggataa aacggtttct tgagattccg cgtcctggct tcccactttc
      181 gcgggaatga cgaattttag gtttctgttt tggttttttg tccttgtagg aatgatgaaa
      241 atttaagttt taggaattta ccggaaaaaa tagaaagcgt tatccacaag ttctgatgtt
      301 cagctcgtga aatgcgtcgg gcaaatcatc gctgtcggca aattccaccc ggtcgtaagc
      361 cgtttcgtct gccaaaaccg cgcgcaagag tgcgttgttg atggcgtgtc ccgatttgta
      421 gccttcaaat gcgccgacaa tcggatgtcc gacgatatac aaatcaccga tggcatcaag
      481 gattttgtgg cgcacaaact catcgggata gcgcaagcct tcaggattca ggacatccgt
      541 gtcgtcaatc acgatggcgt tgttcaaatt gccgcccaaa cccagattgt gggcgcgcat
      601 catttccact tcgtgcataa agccgaaagt gcgcgcgcgc gcgatttcgt cgatgtagga
      661 tttgccggcg aaatcgattt caaaagtggg cgagctgcgg ttgaaaaccg gatggtcgaa
      721 ttcgatggtc agcgttacct taaagccgtc atacggcgta aagcgcaccc atttgcccgc
      781 ttctttgatt tcgacaggct tgaggatttt caaaaaacgc ttttgcgcct tttgatcgac
      841 cacgcccgca tcttgcaaaa ggtaaataaa cggcaggctg gagccgtcca taatcgggat
      901 ttcgggcgcg ttcagctcaa tcagcgcgtt gtcgataccg taggcggaca gcgcggacat
      961 aatgtgttcg atcgtgccga cacgcacgcc tttgtcggta acgatggtgg aggaaaggcg
     1021 ggtatcgttg atcaaataag gggtcagttt gatttgttcg cccatctcgc cgtccaaatc
     1081 ggtacggcgg aaggaaatcc cgctgttttc aggcgcgggg tgcagggtca gtgcgacccg
     1141 ttcgccggaa tgcagcccga ctccggtaac gctgatggat ttcgccaaag ttctttgcag
     1201 cataaaccgc tcccttatca atggggtaag ttttggaata atacgataaa accggaaaaa
     1261 caggctatgt ttttccatag tatttgccaa tgtatccgtt ttcaatacgt aagccgcata
     1321 aaaatgtata gtggattaac aaaaatcaag acaaggcgac gaagccgccc ctcccgaaaa
     1381 acgcaaaaaa tgccgtccga aaacctttcg gacagcattt tcgcgtgaac cgtcattccc
     1441 acaaggacaa aaaaccaaaa cataaaacca aaaacagaaa cctgcatccc gtcattccca
     1501 cgaaagtgga aatccggttc gttcggtttc acttgtttta agtttcgggt aacttcca
//
LOCUS       DBBZXU010000194         1554 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.194, whole genome shotgun sequence.
ACCESSION   DBBZXU010000194 DBBZXU010000000
VERSION     DBBZXU010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.194"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1554
                     /locus_tag="ACJJDE_002087"
     CDS             <1..>1554
                     /locus_tag="ACJJDE_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002251720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7541938.1"
                     /translation="YIADIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNINWNQVQLAY
                     DKWDYKQEGMTPAAAAVVVIVVTVLTYGALSAPAAAGTAGAAGAGAGGAAAGTAAGTG
                     VAAGTAATTGVAAGTSAAAITTAAGKAALASLASQAAVSLINNKGDINHTLKELGKSS
                     TVRQAATAAVTAGVLQGISGLNTQAAEAVSKHFHSPAAGKLTANLINSTAAASVHTAI
                     NGGSLKDNLGDAALGAIVSTVHGEVASKIKFNLSEDYIAHKIAHAVAGCASAVANKGK
                     CRDGAIGAAVGEMVGETLLDGRDVGKLSPQERQKVIAYSQIIAGSVVALVKGDVNTAA
                     NAATVAVENNSLLARRRVNIRWTPRQELEHEYAILEIQAITNQIRRLDPKFNGIAILR
                     TPGEPWTRHDVQTYRQYYNQLRESRGFAVDPIYRIRINNGNEFNRIMSSKYPYNELYV
                     ANPKSATGYFRVDSYNPATEEIISRKFTQFSQIQESTGIGYIKEAVRKYSPGAVISNV
                     PSTPTTIRGR"
BASE COUNT          476 a          393 c          398 g          287 t
ORIGIN      
        1 tatatcgccg acatccccaa aggcaacctc aaaaccgaaa tcgaaaaact cgccaaacag
       61 cccgagtatg cttatttaaa acagcttcaa gttgcgaaaa acatcaactg gaatcaggtg
      121 cagcttgctt acgataaatg ggactacaaa caggagggca tgacacccgc agcagcagct
      181 gtcgtcgtta tcgtcgtaac tgtattgacc tacggcgcac tgtccgcccc ggcagccgcc
      241 ggaacggcgg gcgcggcagg cgcaggagcg ggaggagccg cagcaggaac ggcagccgga
      301 actggagtag cagcaggaac ggcagccaca accggagtag cagcaggcac atcagctgca
      361 gctatcacca cagccgcagg caaagccgca ctggccagtc tcgccagcca agccgcagtt
      421 tccctcatca acaacaaagg agacataaac cataccctga aagaactggg caaaagcagc
      481 accgtcagac aggccgccac cgccgccgta accgcaggcg tactgcaggg cataagcggg
      541 ctgaacaccc aagcagccga agccgtcagc aaacattttc acagtcccgc agcaggcaaa
      601 ctgaccgcta acctgatcaa cagcaccgct gccgcaagtg tccataccgc catcaacggc
      661 ggcagcctaa aagacaactt gggcgatgcc gcactgggtg cgatagtcag taccgtacac
      721 ggagaagtag cgagcaaaat caaatttaat ctcagcgaag actacattgc ccacaagata
      781 gcccatgccg tagcaggctg tgcatcggcg gtagcaaata aaggcaaatg tcgggacggc
      841 gcaatcggcg cggcagtcgg cgagatggtg ggagaaaccc tgttggacgg acgcgatgta
      901 ggcaaactgt caccccaaga acgccaaaaa gtcatagcct actcgcagat tatcgcaggc
      961 agcgtagtgg cattggttaa aggggatgtg aatacggcgg cgaatgcggc tactgtggca
     1021 gtggagaata atagtctttt agctcgcagg agggtaaata tacgttggac tccgcgacaa
     1081 gaattggaac atgaatatgc cattcttgaa atccaggcca ttaccaatca aatccgaagg
     1141 ctggatccga aatttaacgg gattgctatt ctgaggactc ctggagagcc gtggacaaga
     1201 catgatgtac aaacatacag gcaatattat aatcaattaa gggaatccag aggctttgct
     1261 gttgacccaa tttatagaat caggataaac aacggcaatg aatttaaccg tatcatgtca
     1321 tcaaaatacc cttataatga gctttatgta gccaatccta aatcggcgac ggggtatttt
     1381 agggtagatt cgtataatcc tgcgacagag gaaattattt caagaaaatt tacccaattt
     1441 tctcaaatcc aagaaagtac ggggattggt tatatcaagg aggctgttag aaaatatagc
     1501 cctggtgctg tcatttccaa tgttccaagt acacctacta cgataagagg aaga
//
LOCUS       DBBZXU010000195         1548 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.195, whole genome shotgun sequence.
ACCESSION   DBBZXU010000195 DBBZXU010000000
VERSION     DBBZXU010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.195"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..422
                     /locus_tag="ACJJDE_002088"
     CDS             <1..422
                     /locus_tag="ACJJDE_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019272247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HGG7541939.1"
                     /translation="GAEAPSESVPYYLYCLRLRRLVLIFVNPLYIIATTVPAQQTFLD
                     AAELMQWSRETEWLGLNVIAHRNFGKQHAQVEFEAYFRDGQHRSAHHELSGFVNIGGQ
                     WYFIDPTVPHPAMKQPCICGSGKKFKACCGKYLKPVA"
     gene            complement(713..1507)
                     /locus_tag="ACJJDE_002089"
     CDS             complement(713..1507)
                     /locus_tag="ACJJDE_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HGG7541940.1"
                     /translation="MLHRLQKVVRHIAQTEIMPRFLNTPSHRKEDGSMLSEADIAAQT
                     AFAAALPLLIDSPMLGEEMSRQEQSALWEQYSGEKGLWIVDPIDGTNNFVNGLPHFAV
                     SVAFVRNGRAELGVIYNPVSGECFYAERGQGAFLNGTRLPLRLVDKKLNEAIAGVEIK
                     YLRSGKLSSRMSTLAPFGTIRSMGSSTLDWCYLACGRYDVYVHGGQKLWDYAAGALIF
                     EEAGGRLTTLEGDGFWSGEHVFKRSVVAALEPKLFERWVGWIRENQ"
BASE COUNT          404 a          469 c          335 g          340 t
ORIGIN      
        1 aaggtgctga agcaccgagt gaatcggttc cgtactattt gtactgtctt cggcttcgtc
       61 gccttgtcct gatttttgtt aatccactat acatcatcgc tactaccgtt ccggcacaac
      121 aaacattcct cgatgccgcc gaactgatgc agtggagcag agaaaccgaa tggctgggct
      181 tgaatgtcat cgcacaccgc aacttcggca aacagcacgc ccaagtcgaa tttgaagcct
      241 acttccgaga cggacaacac cgatctgcgc atcacgaact gtccggcttc gtcaacatcg
      301 gcggacaatg gtattttatc gatcccaccg ttccgcatcc tgcgatgaaa caaccctgca
      361 tttgcggatc gggcaaaaaa ttcaaagcct gctgcggcaa atatctgaaa cctgtcgcat
      421 aaaaatgccg tctgaacgtt cagacggcat ttttaacgcg caaaaaaaac cattcatacc
      481 aagggtaagt atgaatggtc aatacattgc gggaaaacgt cttacttgct gcactgccga
      541 aaagggagaa acggcagcgg taatcagcgg aaaggattgt acccgtataa atgttaagta
      601 acgttaatta tgaaaatata accgatgttt cggcacacaa tccgcaactg tccggcgcag
      661 gcggcggcaa agcctgttta ttcaaaccct tattcctgcc catctgtcca ccttactggt
      721 tttcccgtat ccacccgacc cagcgttcaa acagcttcgg ttcgagcgcg gcaacgaccg
      781 agcgtttgaa cacgtgttca ccactccaaa acccgtcgcc ttccaaagtc gtcagcctgc
      841 cgcccgcctc ctcgaaaatc aacgcacccg cagcatagtc ccacagcttc tgcccaccgt
      901 gaacataaac atcataacgc ccgcacgcca gataacacca atccaacgta ctgctgccca
      961 tactccgtat cgttccaaaa ggcgcgagcg tactcatacg gctggaaagt ttgcccgaac
     1021 gcaaatattt gatttccacg cccgcaatcg cctcattgag ttttttatcc acgagacgca
     1081 aaggcaggcg ggttccatta agaaacgcac cctgcccccg ttcggcataa aaacattcgc
     1141 cgctgaccgg attgtaaatc acacccaatt cggcgcgccc gttgcggaca aacgccaccg
     1201 acacggcaaa atgcggcagc ccgttgacaa aattgttcgt cccgtctatc ggatcgacaa
     1261 tccacagccc cttttccccc gaatattgtt cccacaaagc cgactgttcc tgccgcgaca
     1321 tttcctcgcc caacatcgga ctgtcgatta aaagcggcaa cgcggcggca aaagccgtct
     1381 gcgcggcaat gtccgcctcg ctcaacatcg aaccgtcttc cttgcggtga gacggcgtat
     1441 tcaaaaaacg cggcataatt tcggtttgcg cgatatggcg cacgactttc tgcaaacggt
     1501 gtaacacttc ctactgtcct catattttga acttgcggca cgcgaacg
//
LOCUS       DBBZXU010000196         1543 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.196, whole genome shotgun sequence.
ACCESSION   DBBZXU010000196 DBBZXU010000000
VERSION     DBBZXU010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1543)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1543)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1543
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.196"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..636
                     /locus_tag="ACJJDE_002090"
     CDS             <1..636
                     /locus_tag="ACJJDE_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7541941.1"
                     /translation="VYAAGWTAPLIGTAGKAAISTCMANPSGCTVMVTQAAEAGAGIA
                     TGAVTVGNAWEAPVGALSKAKAAKQAIPTQTVKELDGLLQESKNIGAVNTRINIANST
                     TRYTPMRQTGQPVSAGFEHVLEGHFHRPIANNRSVFTISPNELKVILQSNKVVSSPVS
                     MTPDGQYMRTVDVGKVIGTTSIKEGGQPTTTIKVFTDKSGNLITTYPVKGN"
     gene            643..1152
                     /locus_tag="ACJJDE_002091"
     CDS             643..1152
                     /locus_tag="ACJJDE_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541942.1"
                     /translation="MSNFEKKYILELNDALSHLNHNSTSFDLLKVLISWLSNDIVIDK
                     FKILGYDFSKYIEMNPDDYPVEKSILNREEIIYLKNNIYRKISSGNFKFQYFVQYIRD
                     ILEYLFIEHIERVCPYCEWGEMQKLEEQNTHETVYLCTQCGCAFYNDNSQFLLKTPLT
                     IPMKRDEFK"
     gene            1221..>1543
                     /locus_tag="ACJJDE_002092"
     CDS             1221..>1543
                     /locus_tag="ACJJDE_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541943.1"
                     /translation="MIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAP
                     RLLPSFTDPVVPKLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQ
                     VQLAY"
BASE COUNT          498 a          305 c          309 g          431 t
ORIGIN      
        1 gtttatgcag caggttggac agctccgctg atcggtacag ctggtaaagc agctatcagc
       61 acctgtatgg ctaatccttc tggttgtact gtcatggtta cgcaggctgc tgaagcgggc
      121 gcgggaatcg ccacgggtgc ggtaacggta ggcaacgctt gggaagctcc agtaggagcg
      181 ttgtcgaaag cgaaggcggc taagcaggct ataccaaccc agacagttaa agaacttgat
      241 ggcttactac aagaatcaaa aaatataggt gctgtaaata cacgaattaa tatagcgaat
      301 agtactactc gatatacacc aatgagacaa acgggacaac cggtatctgc tggctttgag
      361 catgttcttg aggggcactt ccataggcct attgcgaata accgttcagt ttttaccatc
      421 tccccaaatg aattgaaggt tatacttcaa agtaataaag tagtttcttc tcccgtatcg
      481 atgactcctg atggccaata tatgcggact gtcgatgtag gaaaagttat tggtactact
      541 tctattaaag aaggtggaca acccacaact acaattaaag tatttacaga taagtcagga
      601 aatttgatta ctacataccc agtaaaagga aactaactaa atatgagtaa ctttgaaaaa
      661 aaatatattt tagaattaaa tgatgcttta agccatttaa atcataactc tacctcattt
      721 gatttattga aagttttgat ttcatggtta tcaaacgata ttgtcattga taaatttaaa
      781 attttaggtt atgactttag taaatatatc gaaatgaatc ccgatgacta tccggttgaa
      841 aaatctatat tgaatagaga ggaaattatt tatctcaaaa acaatattta tcgtaaaata
      901 tcatcaggaa attttaaatt tcaatacttt gtacaatata ttagagatat tttagaatat
      961 ttatttattg aacatattga aagagtctgt ccttactgcg aatggggtga aatgcaaaaa
     1021 ttagaagaac aaaatacgca tgaaacggtg tatctctgta ctcaatgtgg atgtgctttt
     1081 tataacgata attcacaatt tttattaaaa acccctttaa ccattccaat gaaacgtgat
     1141 gaatttaaat aaacaagccg tagcctgcat gaaccctaaa atccacgtgt agcgtgtgtg
     1201 cgccagcacg catgcgttcc atgatttacg gctcaatgcc gtctgaaaag ctcacaattt
     1261 ttcagacggc atttgttatg caagtaaata ttcagattcc ctgtatgctg tacagacgcg
     1321 ggagtgttaa gccccccttg tttgaagctc cgcggctcct gccgagcttc accgaccccg
     1381 ttgtgcccaa gctctctgct cccggcggct acattgtcga catccccaaa ggcaatctga
     1441 aaaccgaaat cgaaaagctg gccaaacagc ccgagtatgc ctatctgaaa cagctccaag
     1501 tagcgaaaaa cgtcaactgg aaccaggtgc aactggctta cga
//
LOCUS       DBBZXU010000197         1470 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.197, whole genome shotgun sequence.
ACCESSION   DBBZXU010000197 DBBZXU010000000
VERSION     DBBZXU010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1470)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1470)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1470
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.197"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(262..525)
                     /locus_tag="ACJJDE_002093"
     CDS             complement(262..525)
                     /locus_tag="ACJJDE_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541944.1"
                     /translation="MDKEIKICPRCEQGYLYHAKPKYFSGEVILCDECYAMWLGDMKI
                     FYGQYGKDFYDYHEFMKDKGIEEINMWEGELFDHPYYEDEKFK"
     gene            complement(544..>1470)
                     /locus_tag="ACJJDE_002094"
     CDS             complement(544..>1470)
                     /locus_tag="ACJJDE_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VENN motif pre-toxin domain-containing protein"
                     /protein_id="HGG7541945.1"
                     /translation="NTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGA
                     IGAVVGEIVGEALVKNTDFSGMTASEIEKAKANITAYAKLVAGATVGVTGGNVDVAAN
                     ASETAVKNNALDIIWDIGNLVWDGGKWIYAKSIGDKQMAREAAIDFGVDAAAAAVPFV
                     PAGATKISRGGAYVLKAGDEAVDTAKAIQEIQKQTGIKLTYDKVNKVWTTPAGLDYGL
                     DAKHGNRIKHVLAHTIPNPNKPVHSVFNVSRKEVLPLVDEAWRMKGNPLPNDSSVYLV
                     DMKKPIGTKGETKVRIVVQKGTNKIISAYPQK"
BASE COUNT          382 a          362 c          254 g          472 t
ORIGIN      
        1 ttggctgttt gggcgataac gcgtacgggc agtttggttt cgttcagctc gtttttgctg
       61 taattgcttt tacccacttt gatgccgatg aaacgggtac ttttctgaac attcaattgg
      121 tgttggtgaa tgccttcggc tgccagcagt tgcattgagg ccgtctgaaa aacggatatt
      181 cagacggcct attgctactt taaataatat ttgggtttaa aatatcatcg tatttcccaa
      241 attcggggaa cagaaaatca attatttaaa tttttcatcc tcataatatg ggtgatcaaa
      301 aagctctcct tcccacatat ttatttcttc tatgccttta tctttcataa actcatgata
      361 atcataaaaa tcttttccat attgtccgta aaaaattttc atatccccaa gccacatagc
      421 ataacattca tcgcataaaa tgacctcccc agagaaatat ttaggctttg catgataaag
      481 gtagccttgc tcacatcttg ggcaaatttt aatttcttta tccataagag attcctttct
      541 taattatttc tgaggatatg cagaaatgat tttatttgtt cctttttgca caacaatccg
      601 cacttttgtt tctccttttg ttccaatagg tttcttcata tctacaagat atacggatga
      661 atcatttggc aaaggatttc ctttcattct ccaagcttca tcaaccaaag gcaaaacttc
      721 tttacgggac acattaaaaa cagaatgaac aggtttgttt ggatttggaa ttgtatgggc
      781 taaaacatgt ttaatcctat taccatgctt agcatctaac ccataatcta accccgccgg
      841 tgttgtccaa accttattaa ccttatcata agtaagcttg attccggtct gcttctgaat
      901 ttcctgtatg gctttagccg tatcaactgc ttcgtctccc gccttcagaa cataagcccc
      961 gcctcggctg attttagtcg cacctgccgg aacaaaggga acggcagctg cggcggcatc
     1021 cacaccaaaa tcaatcgccg cttctcgagc catctgctta tcgccaatag atttggcgta
     1081 aatccattta ccgccgtccc atacgaggtt gccgatatcc caaataatat ctaatgcatt
     1141 atttttaaca gctgtttcgg aagcatttgc cgccacatca acattgcctc ctgtaacacc
     1201 tacagtcgct ccggctacca attttgcata cgcagtaata ttcgctttag ctttttcaat
     1261 ttcagaagca gtcataccgc tgaaatcggt attcttaacc aaagcctccc cgacaatctc
     1321 ccccacgacc gcaccaatcg cgccgtcctg acacttgccc ttattcgccg ccgctgccgc
     1381 acagcccgct atggcatggg caatcttgtg gactatgtag tgctgatcca actgtttgat
     1441 tttactggct gcttctccat gcgcagtatt
//
LOCUS       DBBZXU010000198         1452 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.198, whole genome shotgun sequence.
ACCESSION   DBBZXU010000198 DBBZXU010000000
VERSION     DBBZXU010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1452)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1452)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1452
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.198"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..687
                     /locus_tag="ACJJDE_002095"
     CDS             <1..687
                     /locus_tag="ACJJDE_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7541946.1"
                     /translation="VYAAGWTAPLIGTAGKLAISTCMANPSGCTVMVTQAAEAGAGIA
                     TGAVTVGNAWEAPVGALSKAKAAKQAAPKETINNLANLAKAEQQILFRIAQRDTQLDA
                     WKTGFNNRVRKGAGLLDASNIPITINGKTIKPVQAISLKGAPVYSGVSEQEIFALYRQ
                     MTGQNPNFRVLPDGRLANGIISTGEWAGTKIALRNFSKTENSTQARWTLDLQNPPSFI
                     KGTKLELKFQ"
     gene            706..1080
                     /locus_tag="ACJJDE_002096"
     CDS             706..1080
                     /locus_tag="ACJJDE_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF596 domain-containing protein"
                     /protein_id="HGG7541947.1"
                     /translation="MDEKQKIKILDFQIDLSSIFNSYKNQMGINIQDKNLKNNFCSFM
                     EELLNDGSIRLHDYTDGIGIPLTGTSKEQVQKLKDIWPTLEDAQAIWPEDPWYYLEWL
                     WWDIACPIDLADLPNIDIYEQA"
BASE COUNT          451 a          287 c          327 g          387 t
ORIGIN      
        1 gtttatgctg caggttggac agctccgctg atcggtacag cgggtaaatt agctatcagc
       61 acctgtatgg ctaatccttc tggttgtact gtcatggtca ctcaggctgc cgaagcgggc
      121 gcgggaatcg ccacgggtgc ggtaacggta ggcaacgctt gggaagcgcc tgtgggggcg
      181 ttgtcgaaag cgaaggcggc caagcaagct gctcctaaag aaacaataaa caatttggca
      241 aatttagcca aagcagaaca gcagatttta ttccgtattg cccaacgcga tacgcaactg
      301 gatgcatgga agacgggatt taacaataga gtaaggaaag gagcaggctt gcttgatgca
      361 agtaatattc cgataaccat taacggaaaa accatcaaac ctgtacaagc cataagctta
      421 aagggagcac ccgtttacag cggcgtaagc gaacaggaga tttttgcgct ttatcggcag
      481 atgactggcc agaatccgaa ttttagagtt ttgcctgacg gaagattagc aaatggcatt
      541 atcagtactg gagaatgggc aggaacaaaa attgcattaa gaaatttttc aaaaacagag
      601 aattcaactc aagcacgatg gacattagat ttgcagaatc ctccatcatt tattaaaggt
      661 actaaattgg agcttaaatt ccaataattt acaaaggatt ttaccgtgga tgagaaacaa
      721 aaaattaaga ttcttgattt tcaaatcgat ttatcctcaa tttttaactc ttataaaaat
      781 caaatgggta ttaatattca agataaaaac ttaaaaaaca atttctgttc ttttatggaa
      841 gaactgttaa atgacggttc aatccgttta catgattata ccgacggtat cggaattcct
      901 ctaactggaa cttcaaaaga acaagtgcag aaattgaaag acatatggcc tactttggaa
      961 gatgcccaag caatatggcc tgaagaccct tggtattact tagaatggct ttggtgggat
     1021 attgcgtgtc caatagattt ggccgatttg ccgaatattg atatttatga gcaagcgtag
     1081 gtatggttag ccgcctttag cggcgtaacc gtacgcatat cagcaaactt tataaaataa
     1141 caaggccgtc tgaaatctgt ttttcaactt tttcagacgg ccttgcaact tggcatttca
     1201 ttcgtacggt tacgccgcta aaggcggcta accgtaccta cgagctctga taaaaatgat
     1261 ttatggaagc aagctgtagc ctgcatgaaa cctaaaatcc atgcgtaagg tgtgtgcttc
     1321 agcgcgcacg cgttccatga tttacggctc aatgccgtct gaaaagctca attttttcag
     1381 acggcatttg ttatgcaagt aaatattcag attccctata tactgcccag acgcgtgcgt
     1441 gctgaagaca cc
//
LOCUS       DBBZXU010000199         1426 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.199, whole genome shotgun sequence.
ACCESSION   DBBZXU010000199 DBBZXU010000000
VERSION     DBBZXU010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1426)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1426)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1426
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.199"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..890
                     /locus_tag="ACJJDE_002097"
     CDS             <1..890
                     /locus_tag="ACJJDE_002097"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HGG7541948.1"
                     /translation="TAQKEAAPAQQQGGIRFSDGIAAVADNEVITRRRLAEAVAEAKA
                     NLPKEAQISESELSRQVLMQLVNQSLIVQAGKRRNIQASEAEIDAVVAKNSALKNLSP
                     AQRRDFADNIIAEKVRQQAVMQNSRVSEAEIDAFLEQAQKQGITLPEGAPLRQYRAQH
                     ILIKADSENAAVGAESTIRKIYGEARSGTDFSSLARQYSQDASAGNGGDLGWFADGVM
                     VPAFEEAVHALKPGQVGAPVRTQFGWHIIKLNEVRDAGTPQERIRNSVRQYIFQQKAE
                     QATVNLLRDLHSGAYVDIR"
BASE COUNT          386 a          414 c          366 g          260 t
ORIGIN      
        1 ccacggcgca aaaagaagcc gcacccgcac aacagcaggg cggtatccgc ttttcagacg
       61 gcattgccgc cgttgccgac aacgaagtca tcacgcgccg ccggcttgcc gaagccgttg
      121 ccgaagccaa agccaacctg cccaaagagg cgcagataag cgaatccgag ctgtcccgac
      181 aggtgctgat gcagcttgtc aaccaatccc tgattgtaca ggcgggcaaa cgccgcaaca
      241 ttcaagcaag cgaagcggaa atcgatgccg tcgtcgcaaa aaattccgcc ctcaaaaacc
      301 tcagccccgc ccaacgccgc gattttgccg acaacatcat tgccgaaaaa gtccgccagc
      361 aggcagtgat gcagaacagc cgcgtgagcg aagctgaaat cgatgccttc ctcgagcagg
      421 cgcaaaaaca aggcatcacc ctgcccgaag gcgcaccgtt gcgccaatac cgcgcccaac
      481 acatcctgat taaagccgac agcgaaaacg ccgccgtcgg cgcggaaagc accatccgca
      541 aaatctacgg agaggcccgc agcggcacag acttttccag cctagcgcgc caatattcgc
      601 aagacgcgag cgcgggcaac ggcggagatt tgggctggtt tgccgacggc gtgatggttc
      661 ccgcctttga agaagccgtc cacgcgctca aacccggaca ggtcggcgcg cccgtccgca
      721 cccaattcgg ctggcatatc atcaaattga acgaagtgcg cgatgccggc acacctcagg
      781 aacgtatccg caattccgtg cggcaataca tcttccaaca aaaagccgaa caggcaaccg
      841 tcaacctgtt gcgtgacctg cattccggcg cgtatgtcga catccgctaa ggcggtttga
      901 agcaaaaagc cataccgatc ggcaaaaatc cgggcggtat ggctttttgg atttcgagtt
      961 acttttacac cgtcattcat cattcccgcg aaagcgggaa tctagaaacg aaaagtaaca
     1021 ggaatttatc gggaatggct ggagtttaaa ggactggatt cccgccgtcg cgggaatgac
     1081 gggattttgg gttgtggtaa tttatcggaa aaacaaaaaa acctatgccg tcattcccga
     1141 gcaggcggga atccggttat ttaaaactgc agaaatttat ccgaagcaac aacaatcttt
     1201 ccatcgtcat tcccgcgtag gcgggaatct aggacgtaga atctaaagaa accgttttat
     1261 ccgataagtt tctgtaccga agaatctgga ttcccgcttt cgcgggaatg acggcgcata
     1321 agttcccgtg cggacagacc tagattccca cctgcgtggg aatgacgatt cagaagttgc
     1381 ctgaaaccta aaaaactgaa accgaacgag ccggatttcc gctttc
//
LOCUS       DBBZXU010000200         1413 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.200, whole genome shotgun sequence.
ACCESSION   DBBZXU010000200 DBBZXU010000000
VERSION     DBBZXU010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1413)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1413)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1413
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.200"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            51..1220
                     /gene="porA"
                     /locus_tag="ACJJDE_002098"
     CDS             51..1220
                     /gene="porA"
                     /locus_tag="ACJJDE_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin PorA"
                     /protein_id="HGG7541949.1"
                     /translation="MRKKLTALVLSALPLAAVADVSLYGEIKAGVEGRNYQLQLTEAQ
                     AANGGASGQVKVTKAKSRIRTKISDFGSFIGFKGSEDLGEGLKAVWQLEQDVSVAGGG
                     ATQWGNRESFIGLAGEFGTLRAGRVANQFDDASQAIDPWDSNNDVASQLGIFKRHDDM
                     PVSVRYDSPDFSGFSGSVQFVPIQNSKSAYTPAHVVVNNKVATHVPAVVGKPGSDVYY
                     AGLNYKNGGFAGNYAFKYARHANVGRNAFELFLIGSATSDQAKGTDPLKNHQVHRLTG
                     GYEEGGLNLALAAQLDLSENADKTKNSTTEIAATASYRFGNAVPRISYAHGFDLIERG
                     KKGENTSYDQIIAGVDYDFSKRTSAIVSGAWLKRNTGIGNYTQINAASVGLRHKF"
BASE COUNT          356 a          348 c          366 g          343 t
ORIGIN      
        1 gtttgcccga tgtttttagg tttttatcaa atttacaaaa ggaagccgat atgcgaaaaa
       61 aacttaccgc cctcgtattg tccgcactgc cgcttgcggc cgttgccgat gtcagcctat
      121 acggcgaaat caaagccggc gtggaaggca ggaactacca gctgcaattg actgaagcac
      181 aagccgctaa cggtggagcg agcggtcagg taaaagttac taaggccaaa agccgcatca
      241 ggacgaaaat cagtgatttc ggctcgttta tcggctttaa ggggagcgag gatttgggcg
      301 aaggtctgaa agctgtttgg cagcttgagc aagacgtatc cgttgccggc ggcggcgcga
      361 cccagtgggg caacagggaa tcctttatcg gcttggcagg cgaattcggt acgctgcgcg
      421 ccggtcgcgt tgcgaatcag tttgacgatg ccagccaagc cattgatcct tgggacagca
      481 acaatgatgt ggcttcgcaa ttgggtattt tcaaacgcca cgacgatatg ccggtttctg
      541 tacgctacga ctctccggac ttttccggtt tcagcggcag cgttcaattc gttccgatcc
      601 aaaacagcaa gtccgcctat acgccggctc atgttgttgt gaataacaag gttgctactc
      661 acgttccggc tgttgtcggc aagcccggat cggatgtgta ttatgccggt ctgaattaca
      721 aaaatggcgg ttttgccggg aactatgcct ttaaatatgc gagacacgcc aatgtcggac
      781 gtaatgcttt tgagttgttc ttgatcggca gcgcgacgag tgatcaagcc aaaggtaccg
      841 atcccttgaa aaaccatcag gtacaccgcc tgacgggcgg ctatgaggaa ggcggcttga
      901 atctcgcctt ggcggctcag ttggatttgt ctgaaaatgc cgacaaaacc aaaaacagta
      961 cgaccgaaat tgccgcgact gcttcctacc gcttcggtaa tgcagttcca cgcatcagct
     1021 atgcccatgg tttcgacttg atcgaacgcg gtaaaaaagg cgaaaatacc agctacgatc
     1081 aaatcatcgc cggcgttgat tatgattttt ccaaacgcac ttccgccatc gtgtctggcg
     1141 cttggctgaa acgcaatacc ggcatcggca actacactca aattaatgcc gcctccgtcg
     1201 gtttgcgcca caaattctaa atatcggggc ggtgaagcgg atagctttgt ttttgacggc
     1261 ttgcattcat tcttcgattg caatctgact gccaatctgc tcagccccaa acaaaaatcc
     1321 ggatacggaa gaaaaacggc aataaagaca gtaaataccg tctgaaagat tttcagacgg
     1381 tatttcgcat tttcggtttg gtttgcacat ata
//
LOCUS       DBBZXU010000201         1409 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.201, whole genome shotgun sequence.
ACCESSION   DBBZXU010000201 DBBZXU010000000
VERSION     DBBZXU010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1409
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.201"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(47..1039)
                     /gene="porB"
                     /locus_tag="ACJJDE_002099"
     CDS             complement(47..1039)
                     /gene="porB"
                     /locus_tag="ACJJDE_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002244345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric porin PorB"
                     /protein_id="HGG7541950.1"
                     /translation="MKKSLIALTLAALPVAAMADVTLYGTIKAGVETSRSVEHNGGQV
                     VSVETGTGIVDLGSKIGFKGQEDLGNGLKAIWQVEQKASIAGTDSGWGNRQSFIGLKG
                     GFGKLRVGRLNSVLKDTGDINPWDSKSDYLGVNKIAEPEARLISVRYDSPEFAGLSGS
                     VQYALNDNAGRHNSESYHAGFNYKNGGFFVQYGGAYKRHQDVDDVKIEKYQIHRLVSG
                     YDNDALHASVAVQQQDAKLVEDNYSHNSQTEVAATLAYRFGNVTPRVSYAHGFKGSFD
                     DADLSNDYDQVVVGAEYDFSKRTSALVSAGWLQEGKGENKFVSTAGGVGLRHKF"
BASE COUNT          321 a          325 c          367 g          396 t
ORIGIN      
        1 aagcctgtct ggcgacaggc tttttgttga taccaatctt tgcagattag aatttgtggc
       61 gcagaccgac accgccggca gtcgatacga atttgttttc gcctttgcct tcttgcaacc
      121 aaccggcaga aaccaaggca gaagtgcgtt tggagaagtc gtattccgca ccgacaacca
      181 cttggtcgta atcgttgctt aagtctgcat catcaaacga gcctttgaag ccgtgggcgt
      241 aagaaacgcg gggcgttacg ttgccgaagc ggtatgccaa ggtagcggca acttcggttt
      301 gagagttgtg cgaataattg tcttcaacca atttggcatc ttgttgctgt acggctacgg
      361 aagcgtgcag ggcatcattg tcgtaaccgc tgaccaaacg gtgaatctgg tatttttcaa
      421 tcttcacgtc atccacatcc tgatgtcttt tataggcacc gccatattgc acgaagaagc
      481 cgccgttttt gtagttgaag ccggcgtggt aagattcgct gttatgtctg cctgcattgt
      541 cgttaagcgc gtattgtacg ctgccgctga ggccggcaaa ttcgggagaa tcgtagcgta
      601 cggaaatgag gcgtgcttcg ggttcggcaa ttttgtttac acccaaatag tcgcttttgc
      661 tatcccaagg attgatgtcg ccggtgtctt tcaggacgct gttcaaacgg ccgacgcgca
      721 atttaccgaa gccgcctttc aaaccgatga aggattggcg gttgccccaa ccggagtcag
      781 tgccggcgat agatgccttt tgctcaacct gccaaatggc tttcagaccg ttgccgaggt
      841 cttcttggcc tttgaagccg attttcgaac ccaaatcaac gatgccggta ccggtttcaa
      901 cgctaaccac ctgacctcca ttgtgctcta cagagcggga agtttctacg ccggctttga
      961 tggtgccgta cagggtaacg tcagccattg ctgcaacagg aagggctgcc aaagtcaggg
     1021 caatcaggga ttttttcatt gctgtattcc ttttttggtt aagaaattta agcaggccgg
     1081 gctttccaag ccgcttagct ttgcatttac cgccgacgtt ttcggcgatt ccatgtctga
     1141 aactatagat gttcctgtct gaaaaaacaa acttctgcct gtttttgtgt ggaattcgat
     1201 gtgtattttg aagggcggat agagatattg tgggtatttt ttgttttata acatatggtt
     1261 atttaaattt tttaagattt gcatttttac aacacttact cgggagggta ttggagggca
     1321 ttgcaaaccg ggggttataa agacggcaaa aaacgcgcac gtggtttctt tcggaacggg
     1381 cggatgcaaa acccgcccct gcggcagga
//
LOCUS       DBBZXU010000202         1405 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.202, whole genome shotgun sequence.
ACCESSION   DBBZXU010000202 DBBZXU010000000
VERSION     DBBZXU010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1405
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.202"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(60..731)
                     /locus_tag="ACJJDE_002100"
     CDS             complement(60..731)
                     /locus_tag="ACJJDE_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7541951.1"
                     /translation="MFPDKYKLSLKENIFLAKKVLVAQIHNLSRFENCQTTLLQTEQI
                     IHGKNVASASLEDIQTILNLKRAYQYVISHISNGEPVDISLLKKINNTVAKDDSLAPG
                     DFRTGSVGVTLLDGSRHAPNPVKEIEVARVLQNIGLQSGSTTEAAVRFMLYCMRQQVF
                     WDGNKRTATLFANGLMMERGRGILEISEMQMPQFNEKLSAFYRSGDDTDISKFVYQNC
                     ISGID"
BASE COUNT          346 a          312 c          321 g          426 t
ORIGIN      
        1 aaaatcccct aaatgtcttg gtgggaattt aaggggtttt ggggaatttt gcaaaggtct
       61 cagtctatgc ccgatataca attttgatac acaaacttgg aaatatcggt atcgtcgccg
      121 gagcgataga atgcggacag tttttcattg aattgcggca tctgcatttc ggagatttcc
      181 aagatgccac ggcctctctc catcatcaga ccattggcaa ataaggttgc cgttcgtttg
      241 ttgccgtccc aaaaaacctg ctgccgcata caataaagca taaaacggac ggctgcctcc
      301 gtcgtcgaac cgctttgcag tccgatattt tgtaacacgc gggccacttc aatttccttc
      361 actggattcg gggcatgacg ggaaccgtcc aatagcgtta cgccgaccga accggtacgg
      421 aaatcaccgg gtgccaaaga atcgtccttg gcaacagtgt tgttgatttt tttaaggagt
      481 gaaatatcga ccggttcgcc gtttgaaata tgcgaaatca catattgata ggcacgtttc
      541 aggttcaaga tggtttggat gtcttccagt gacgcggagg ctacattttt gccatggata
      601 atttgttcgg tctgcaacaa ggtcgtctga caattctcaa aacggctgag gttgtgaatt
      661 tgggcaacca atactttctt tgccaaaaaa atattttctt tcaaactcaa cttgtatttg
      721 tcgggaaaca cgataattcc ttaaataatt aaagcagtac gttaaatcat catcttatca
      781 tcactttcgg ggtttatgtt gcgtgcgtcc gttttctaat acggtttccc atcccgcgaa
      841 acgaggcgga ggcctgtgca aaaaacctgt tcacgaaatt ttccgcatta acgatacgct
      901 gaaaatgcgc taaaaatgac tgtgtttgaa tatcggttga tttcatccgt ttgtgtaacc
      961 tcgcgccggt tttgtcatga ttttgcatta tagtgaatta aatttaaacc agtacagcgt
     1021 tgcctcgcct taccgtacta tctgtactgt ctgcggcttc gtcgccttgt cctgattttt
     1081 gttaattcac tatatttttg tcatgcggat atttcacggg atgacaaaac gggcgcaaaa
     1141 aagcccgatt ggaaaatccg aatcgggctt ttttgtgatg ttctgttcga tttgcgtact
     1201 aactgccggc cggagcgtcc gcgcccggtt tggcaggtcg gattctcgaa tccgacggct
     1261 atttgagatg gcaggctttt gtcggataca agtatccgac ctacggcttg cttttcgtca
     1321 ttcccgcgaa agcgggaatc tagaatctcg gactttcaga taatctttga atattgctgt
     1381 tgttctaagg tctagattcc cgcct
//
LOCUS       DBBZXU010000203         1363 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.203, whole genome shotgun sequence.
ACCESSION   DBBZXU010000203 DBBZXU010000000
VERSION     DBBZXU010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1363)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1363)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1363
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.203"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(125..427)
                     /gene="imm40"
                     /locus_tag="ACJJDE_002101"
     CDS             complement(125..427)
                     /gene="imm40"
                     /locus_tag="ACJJDE_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003750739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Imm40 family immunity protein"
                     /protein_id="HGG7541952.1"
                     /translation="MLNEIFEIYSRQGESLIGIGIREAALPVPIAIDILNLFINERIL
                     VLGGDIYIKKDNYFYQTYDNWYYEGSNLFNSIDKAMHYLSQIKLENAYVSFVLKFI"
     gene            complement(453..719)
                     /locus_tag="ACJJDE_002102"
                     /pseudo
     CDS             complement(453..719)
                     /locus_tag="ACJJDE_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224185.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(740..946)
                     /locus_tag="ACJJDE_002103"
     CDS             complement(740..946)
                     /locus_tag="ACJJDE_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPCC family cysteine-rich protein"
                     /protein_id="HGG7541953.1"
                     /translation="MMENSKKTWEIDGEIWLHCPVCGTEVMDYDICDVCQWQNTGETN
                     IDGGPNEMTLAEAKEAYAKGLPIR"
     gene            complement(912..>1363)
                     /gene="mafB"
                     /locus_tag="ACJJDE_002104"
     CDS             complement(912..>1363)
                     /gene="mafB"
                     /locus_tag="ACJJDE_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012503515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="polymorphic toxin MafB class 3"
                     /protein_id="HGG7541954.1"
                     /translation="DGEMAGGNKPPKPSTQQHPTHSDNNIGLPASYVKPDTSISPTGT
                     IQDRIRWTKSKFPTEKSLNGHFKAHGKEFGDITIEDYQKMASDLLSKQTSDKILGYQT
                     EHRRVRYDINNNIYVLANPKTFKIKTMFKPNLGKKYYDGEFKKDMGN"
BASE COUNT          389 a          253 c          205 g          516 t
ORIGIN      
        1 tcattaatac cttgtagagt ctgctgagcg gctgtatctg agccggtcag tgtaggttgg
       61 attaaaaccc agcattttca acatcttgat gttttactat aaatctattc ttgtgcttcc
      121 tttgttagat aaatttcaac acaaaagata cgtatgcatt ctctaatttt atttgagata
      181 aataatgcat tgctttgtcg atactgttaa ataaattact tccctcgtaa taccaattat
      241 catatgtttg ataaaaataa ttatctttct tgatataaat atctcccccc aatacaagta
      301 ttctctcatt gataaataaa tttaatatat ctattgcaat agggacgggt aatgcggctt
      361 ctctaattcc aattcctatc aaagattccc cttgtctcga ataaatttca aaaatttcat
      421 ttaacatgtt aatctctatc tactattttt caatcggtat aaaccctatt cacagtttca
      481 tcttgtattt ctttatgaat acttaatata ttaagatagc ttaggaattt tattttctca
      541 gattgaggca actcatcaaa accaagccaa caataaaaat tgttatatga ttttaaaaaa
      601 tcaacaattt ttatttttcc taaaaccaaa tcttcgacta actgggttgc ataaataata
      661 tcatttatga ttttaacagg taaattattt gataggtaac catgggattc cgtcatcatt
      721 gatttctcta ggtgcttatt tatctgattg gtaagccttt tgcgtaagct tctttcgcct
      781 ccgcaagtgt catttcatta gggccaccat ctatattagt ttctcctgta ttttgccact
      841 gacaaacgtc acagatatca tagtccataa cttcagttcc gcaaacagga caatgtagcc
      901 atatttctcc gtcaatttcc catgtctttt ttgaattctc catcataata cttctttcct
      961 aagtttggtt taaacattgt tttgattttg aatgtttttg gattggccaa aacatagata
     1021 ttgttattga tatcatagcg cactcgtcta tgttccgtct gataacctaa tatcttgtcc
     1081 gatgtctgtt ttgataacaa atcagacgcc attttttggt agtcttcaat ggttatatcg
     1141 ccaaattctt ttccatgagc tttgaaatgt ccatttaaag atttctcagt aggaaacttg
     1201 gactttgtcc atctgatgcg gtcttgaatt gttcctgtcg gagaaataga tgtatcaggt
     1261 ttaacatatg aggcaggtaa gccgatattg ttatcagagt gtgtagggtg ttgctgcgta
     1321 cttggttttg gtggcttatt cccacctgcc atctccccat cta
//
LOCUS       DBBZXU010000204         1274 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.204, whole genome shotgun sequence.
ACCESSION   DBBZXU010000204 DBBZXU010000000
VERSION     DBBZXU010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1274
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.204"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(181..333)
                     /locus_tag="ACJJDE_002105"
                     /pseudo
     CDS             complement(181..333)
                     /locus_tag="ACJJDE_002105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805306.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            489..>1274
                     /locus_tag="ACJJDE_002106"
     CDS             489..>1274
                     /locus_tag="ACJJDE_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="filamentous hemagglutinin N-terminal
                     domain-containing protein"
                     /protein_id="HGG7541955.1"
                     /translation="MNKTLYRVIFNRKRGAVVAVAETTKREGKSCADSDSGSAHVKSV
                     PFGTTHAPVCRSNIFSFSLLGFSLCLAVGTANIAFADGIIADKAAPKTQQATILQTGN
                     GIPQVNIQTPTSAGVSVNQYTQFDVGNRGAILNNSRSNTQTQLGGWIQGNLWLARGEA
                     RVVVNQINSSHSSQMNGYIEVGGRRAEVVIANPAGIAVNGGGFINASRATLTTGQPQY
                     QAGALTGFQVRSGHIAITGQGLDARDTDFTQILSHAVKIDGPVW"
BASE COUNT          377 a          262 c          281 g          354 t
ORIGIN      
        1 cgtccaaaat gctctttggg aatgctattg gattatagac cttacaacag aaaaaaaggt
       61 cggaaagtag aaagactgct ttttaaattc aaacggccaa gcaagtaaag acttggccaa
      121 caaatgggac aaaatccgac tgttttaaat tgccagtcaa atactggaaa acttgcgtaa
      181 atggctaaat tcactgacat caagtacatc ataactacga aaggtatccg tatacacaat
      241 gccatcagac ttaactttct ctcggataat cggcaataat gttgctgatt gcgcattagg
      301 gacaacgacg gtataaacct tgccatttcg ttcgaatggg atttttaacc gttatctagt
      361 aaagtcccta atttaataaa caaatggcag taaaatggcg gtaattgact cgccaaaatc
      421 cttgatctag aatggtcaga ctatccaatt ttttctaata actctataaa aatcaaataa
      481 ctgaaatcat gaataaaact ctctatcgtg taattttcaa ccgcaaacgt ggggctgtgg
      541 tagccgttgc tgaaactacc aagcgcgaag gtaaaagctg tgccgatagt gattcaggca
      601 gcgctcatgt gaaatctgtt ccttttggta ctactcatgc acctgtttgt cgttcaaata
      661 tcttttcttt ttctttattg ggcttttctt tatgtttggc tgtaggtacg gccaatattg
      721 cttttgctga tggcattatt gctgataaag ctgctcctaa aacccaacaa gccacgattc
      781 tgcaaacagg taacggcata ccgcaagtca atattcaaac ccctacttcg gcaggggttt
      841 ctgttaatca atatacacag tttgatgtgg gtaatcgcgg ggcgatttta aacaacagcc
      901 gcagcaacac ccaaacacag ctaggcggtt ggattcaagg caatctttgg ttggcaaggg
      961 gcgaagcacg tgtggttgta aaccaaatca acagcagcca ttcttcacaa atgaatggct
     1021 atattgaagt gggcggacga cgtgcagaag tcgttattgc caatccggca gggattgcag
     1081 tcaatggtgg tggttttatc aatgcttccc gtgctacttt gacgacaggc caaccgcaat
     1141 atcaagcagg cgcattaaca ggctttcagg ttcgttcggg tcatattgcg atcacgggac
     1201 aaggtttgga tgcacgtgat accgatttca cgcagatatt gagccatgcg gttaagattg
     1261 atgggcctgt gtgg
//
LOCUS       DBBZXU010000205         1237 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.205, whole genome shotgun sequence.
ACCESSION   DBBZXU010000205 DBBZXU010000000
VERSION     DBBZXU010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1237
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.205"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..813
                     /locus_tag="ACJJDE_002107"
     CDS             <1..813
                     /locus_tag="ACJJDE_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541956.1"
                     /translation="ENNTLYPRCVGAKCDEFQKEQQKWIRENPEEYREVLLLQTGFIP
                     IIGDIQSFVQAQTAADHLFALLGVVPGIGESIQAYKVAKAAKNLQGMKKALDKAATVA
                     TAQGYVSKTKIKIGQTELRVTAATDKQLLKAIGEGRDTTGKMTEQLFDSLAKQNGFRV
                     LSGGKYGGNNGFDHVWQAADGSVVLIVESKQIRNGTVQLNPNGAGGYTQMSREWIKQV
                     VKSLPDGSPAKAVVLKANQNGKLKTAIAGVDRQTGKAVILSVKVPSKTNIRR"
     gene            816..>1237
                     /locus_tag="ACJJDE_002108"
     CDS             816..>1237
                     /locus_tag="ACJJDE_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002224013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 49 family protein"
                     /protein_id="HGG7541957.1"
                     /translation="MGHNMMTTQKWYEHITNVIIGNTANFNSGCPESIDYVDEKKGVP
                     LAAMKYILMYTEAAASHAYLFEHDLKKFKQYAYVAGKLGILQSVDDEDPEPFFFPCDM
                     LNIQDPMFLMLMSDSPQLREFLVRNIDNIANDTEAFVNR"
BASE COUNT          398 a          230 c          293 g          316 t
ORIGIN      
        1 gagaataata ctttgtatcc tagatgcgtt ggtgcaaagt gtgatgaatt tcaaaaggaa
       61 caacaaaaat ggatacgtga aaatcctgaa gaatatcgag aagttttgct tcttcagaca
      121 ggatttattc caattatcgg tgatatacag agttttgtac aagcacagac cgctgccgat
      181 cacctgtttg ctttgctggg tgtggttccg ggtatcggtg aatcgataca ggcctataaa
      241 gtagcgaaag cggcaaaaaa tttacaaggc atgaaaaaag ccttggacaa ggcagcaacc
      301 gttgccactg cacagggcta tgtcagtaaa accaaaatca aaatcggtca aactgaatta
      361 agggttactg cagcaactga caaacaattg ctgaaagcta ttggcgaagg aagggacacg
      421 acaggtaaaa tgaccgagca gttatttgac tctttagcta aacaaaatgg cttcagagtg
      481 ctttcgggcg gcaaatacgg cggaaataac ggttttgatc atgtatggca ggctgccgat
      541 ggtagtgttg ttttgattgt agaaagtaag cagattagga acggtacggt acagctgaat
      601 ccgaatggtg cgggtggata tacgcagatg agtcgtgaat ggattaaaca agttgtaaaa
      661 agtttacctg atggtagtcc tgctaaggca gttgtcttaa aagcaaatca gaacggcaaa
      721 ttaaaaacgg caatagcagg cgttgatcgt caaacaggta aggccgttat tctttctgtc
      781 aaagttcctt ctaaaaccaa tataaggaga taacaatggg gcacaatatg atgaccaccc
      841 aaaaatggta tgaacatatt actaatgtaa tcataggcaa tactgctaat ttcaatagcg
      901 gttgccccga atctatagat tatgtagatg aaaaaaaagg cgtgccgctt gcagcgatga
      961 aatacatttt aatgtacact gaagctgcgg cttcccatgc ctatctattt gaacatgatc
     1021 ttaagaaatt caagcaatat gcttatgttg caggaaagtt gggtattttg cagagtgtag
     1081 atgatgaaga ccccgaaccc ttcttctttc cctgcgacat gctcaacatt caagatccga
     1141 tgtttctgat gctgatgagc gacagcccgc agctgcgcga gtttttggtg cgcaatatcg
     1201 acaacatcgc caacgataca gaagccttcg taaaccg
//
LOCUS       DBBZXU010000206         1193 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.206, whole genome shotgun sequence.
ACCESSION   DBBZXU010000206 DBBZXU010000000
VERSION     DBBZXU010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1193
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.206"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(114..384)
                     /locus_tag="ACJJDE_002109"
                     /pseudo
     CDS             complement(114..384)
                     /locus_tag="ACJJDE_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002248307.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein frpA"
BASE COUNT          413 a          182 c          157 g          441 t
ORIGIN      
        1 ccccctttaa tgcaaacata gagaatactt cccttgaagc actatcaatt tctacttaac
       61 taaaactcta gctctatttt aaaattttgt caaaaatagt taaatacttt tatttatttt
      121 aaataatgag atacatttat ggttatttgt tttagacagc ctaaaacaaa cggggaaatc
      181 gtgttttccc gaacatggct aatggatagc attttgtccg tgaggaggct gtgcaggttt
      241 gtcagcagcc aacagcgaat cgcctgcttg cgcggttgtg ccgtcttttt tggtgtagct
      301 gccttgttga gccaaagtgt tgccgttacc aagatttttg tttacatctt ttcgagaaaa
      361 ttggctttgc atttgcctta acaaagatat ttctgctact cgtgctttat tatttatatt
      421 atatttactc tgcatttttc ttacaacttg tctcaactga ctttgtgttt tttgtaattc
      481 acgttgtacc gattttccta aactttcatg tttggctgca taattggtag aatcagttga
      541 catttgtgta taaaaatttt tacgaaaatt ttcgtaactc agattaatta catccgtact
      601 tgcagttata aaatcttgta taaattcaat agaaactgaa ttatcatcag atttggcttt
      661 gttattttcc atattgagcc tctcttaatt tgaaaaaatt aacataaaca tttaaaaata
      721 aaacaaaatt atataataaa aaaaataatg agaatataaa ggataaaaag agagttaagt
      781 tatttaatcg gacttgttct ctataaatca taaggcacca aataagccat aataaattta
      841 gtaaataaaa actgcttata cccaactttc ttttcttgga acctattatt atttcaactc
      901 tggatgaaaa aatagaattt aaaaattttt ttctttgata tatcgttaat atctccctag
      961 tttttcttaa aaaaatataa tcatatatat actacacaac attggtaata aataaattaa
     1021 aagcgaaagg taattaaatt gataattgta aattatataa taaacaacat acgaagaaaa
     1081 aattattata gatgatttgc tatacgaata aaaaaatatc ctacctagcc cgaaccttct
     1141 tataatttgt actatgtgat cattcatttc aatatccatt taagctttca att
//
LOCUS       DBBZXU010000207         1149 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.207, whole genome shotgun sequence.
ACCESSION   DBBZXU010000207 DBBZXU010000000
VERSION     DBBZXU010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1149)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1149)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1149
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.207"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..638
                     /locus_tag="ACJJDE_002110"
     CDS             <1..638
                     /locus_tag="ACJJDE_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HGG7541958.1"
                     /translation="VLGIVGRSGSGKSTLTKLVQRLYVPEQGRVLVDGNDLALAAPAW
                     LRRQVGVVLQENVLLNRSIRDNIALTDTGMPLERIIEAAKLAGAHEFIMELPEGYGTV
                     VGEQGAGLSGGQRQRIAIARALITNPRILIFDEATSALDYESERAIMQNMQAICANRT
                     VLIIAHRLSTVKTAHRIIAMDKGRIVEAGTQQELLAKPNGYYRYLYDLQNG"
     gene            862..>1149
                     /locus_tag="ACJJDE_002111"
     CDS             862..>1149
                     /locus_tag="ACJJDE_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HGG7541959.1"
                     /translation="MSTFFRQTAQAMIAKHINRFPLLKLDQVIDWQPIEQYLNRQKNR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDEL"
BASE COUNT          263 a          311 c          316 g          259 t
ORIGIN      
        1 aagtgctggg gattgtggga cgttcggggt cgggcaaatc cacactcacc aaattggtgc
       61 agcgtctgta tgtaccggag cagggacggg tgttggtgga cggcaacgat ttggctttgg
      121 ccgctcctgc ctggctgcgg cggcaggtcg gcgtggtctt gcaggagaat gtgctgctca
      181 accgcagcat acgcgacaat atcgcgctga cggatacggg tatgccgctg gaacgcatta
      241 tcgaagcagc caaactggcg ggcgcacacg agtttattat ggagctgccg gaaggctacg
      301 gcaccgtggt gggcgaacaa ggggccggct tgtcgggcgg acagcggcag cgtattgcga
      361 ttgcccgcgc gttaatcacc aatccgcgca ttctgatttt tgatgaagcc accagcgcgc
      421 tggattatga aagtgaacga gcgattatgc agaacatgca ggccatttgc gccaaccgga
      481 cggtgctgat tatcgcccac cgtctgtcca ccgttaaaac ggcacaccgg atcattgcca
      541 tggataaagg caggattgtg gaagcgggaa cacagcagga attgctggcg aagccgaacg
      601 gatattaccg ctatctgtat gatttacaga acgggtagaa ggcgggggat gggcgtgtag
      661 gctgcttttt tcgtaacgtt ctgcgttttc agaccgtcgt ttactgggtt tactgactga
      721 aatgaaacca aagtgcaggc tgccggaaag actttttctg tctttttagg cagcctgcac
      781 ttctttttca ctcatctaga gacctttgca aaattcccca aaatccccta aattcccacc
      841 aagacattta ggggatttct catgagcacc ttcttccggc aaaccgccca agccatgatt
      901 gccaaacaca tcaaccgctt cccgctattg aagttggacc aggtgattga ttggcagccg
      961 atcgagcagt acctgaaccg tcaaaaaaac cgttacctcc gagaccaccg cggccgtccc
     1021 gcctacccgc tgttgtccat gttcaaagcc gttctgctcg gacaatggca cagcctctcc
     1081 gatcccgaac tcgaacacag cctcatcacc cgcatcgact tcaacctgtt ttgccgtttc
     1141 gacgaactg
//
LOCUS       DBBZXU010000208         1082 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.208, whole genome shotgun sequence.
ACCESSION   DBBZXU010000208 DBBZXU010000000
VERSION     DBBZXU010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1082)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1082)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1082
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.208"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            284..721
                     /locus_tag="ACJJDE_002112"
     CDS             284..721
                     /locus_tag="ACJJDE_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003711106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VapD"
                     /protein_id="HGG7541960.1"
                     /translation="MSRYLITFDMDTNCLKDNYHGNNYTNAYSDIKTILARHGFENIQ
                     GSVYLGREGISEAHGTIAIQELTARFDWFYSCISNIKFYRLESDLNAQFIADGVYQAK
                     QAFLQRVEQLRISLTEAGLSDEQINQVLEKQKFELESPNLKLN"
BASE COUNT          338 a          248 c          219 g          277 t
ORIGIN      
        1 gccaccaaaa cccttgctag ctaagggtta aacagctcac ttgaaatcta cttaagtcta
       61 atctaaacta tccaatatgg atagattttt aaacataggg caagcagcaa aattattgta
      121 gctgaaagca caatcactcg ctggtggtct caaacacgtg ccgactacct cgccgaaaac
      181 actatcagcc gcgataaacc gtgggaaaag ctcgttatca gccgccgcac ttggtactat
      241 cgcgggaaac cgatgctgtc tgaaacgcaa caggagaaaa ataatgagcc gttacctgat
      301 tacctttgat atggatacca actgcctgaa agacaattac cacggaaata actataccaa
      361 tgcctactcc gatattaaaa ccatcttggc tagacatgga tttgagaaca ttcagggcag
      421 tgtttatcta ggccgtgaag gcatcagtga agcacacgga acaatagcca ttcaggaact
      481 gaccgctcgg tttgattggt tttactcctg tatttcaaac attaagtttt accgccttga
      541 aagtgatttg aacgcacaat ttatcgctga tggtgtgtat caagccaaac aggctttcct
      601 tcaacgtgtt gaacaacttc gtatatccct aacagaagct ggattgtctg atgagcaaat
      661 caatcaggtt ctggaaaaac agaaatttga attggaaagt cctaacctga aattaaatta
      721 acctccttta ctcaccaaca tccgccgcag ctctgtcagt ttttggcgcg ctgcggcgat
      781 ttctgtgcgt tttagagctt cgggtagggt gtgaaacaac tcactcgaaa tttacttaag
      841 tctaatctaa actatccaag cagtaattag tacaaaaaag gcaaacttat tttaggagct
      901 taaaattgca gccgcgataa accgtgggag agtctcggca tttcccgcgc cacttggtac
      961 aaacgtggca aaccgatgcc gtctgaaacc gtacaacagg agacaaaata atgcttgctc
     1021 aaatcgaact cacaccctgc cagctaatgg tttacgtaac ttaaggttac tggatttacg
     1081 ca
//
LOCUS       DBBZXU010000209         1071 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.209, whole genome shotgun sequence.
ACCESSION   DBBZXU010000209 DBBZXU010000000
VERSION     DBBZXU010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1071)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1071)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1071
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.209"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..342)
                     /locus_tag="ACJJDE_002113"
     CDS             complement(<1..342)
                     /locus_tag="ACJJDE_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541961.1"
                     /translation="MHTQRKNFSDSISLHDCYCTEIKVEGRNVCFNFEDGFVVPDNNP
                     NNQAGKHLKTDFSRVVLTHKNENAEDDYLFDIFEDIVFLGKRLFTVRKFLDFSELLEM
                     VNTQGYFLEFLY"
     gene            440..>1071
                     /locus_tag="ACJJDE_002114"
     CDS             440..>1071
                     /locus_tag="ACJJDE_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7541962.1"
                     /translation="MSTFFRQTAQAMIAKHIDRFPLLKLEQVIDWQPIEHYLNRQKTR
                     YLRDHRGRPAYPLLSMFKAVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYS
                     TLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVIDATIIQTAGSKQRQAIE
                     VDEEGQVSGQTTPSKDKDARWTKKNGLYRLGYKQHTRTDEEGYIKKLHITP"
BASE COUNT          340 a          294 c          193 g          244 t
ORIGIN      
        1 atacagaaac tcaagaaaat aaccttgtgt attgaccatc tcaagcaatt cagaaaaatc
       61 aagaaatttt ctgaccgtaa acaaacgttt ccctaaaaaa acgatgtctt caaaaatatc
      121 gaacaaataa tcatcttcgg cgttttcatt tttatgggtt aaaacaacac gggaaaaatc
      181 tgttttcaga tgcttgcccg cttgattgtt cggattattg tccggaacga caaaaccgtc
      241 ctcaaaatta aagcagacgt tgcgtccttc tacctttatc tctgtgcaat aacaatcatg
      301 tagagaaatg ctatccgaaa aattttttct ttgtgtatgc aaaaaaagtt ttcattcaag
      361 tacccatatc taacacgaga cctttgcaaa attccccaaa atcccctaaa ttcccaccaa
      421 gacatttagg ggattttcca tgagcacctt cttccggcaa accgcacaag ccatgattgc
      481 caaacacatc gaccgtttcc cactattgaa gttggagcag gtgattgatt ggcagccgat
      541 cgaacactac ctgaaccgtc aaaaaacccg ttaccttaga gaccaccgcg gccgtcctgc
      601 ctatcccctg ctgtccatgt tcaaagccgt cctgctcgga caatggcaca gcctctccga
      661 tcccgaactc gaacacagcc tcattacccg catcgacttc aacctgtttt gccgtttcga
      721 cgaactgagc atccccgatt acagcacctt atgccgctac cgcaactggc tggcgcaaga
      781 cgacaccctg tccgaattgc tcaaactgat taaccgccaa ctgaccgaaa aaggtctaaa
      841 aatagagaaa gcatccgccg ccgtcattga cgccaccatt attcagaccg ccggcagcaa
      901 acagcgccag gccatagaag tcgacgagga aggacaagtc agcggccaaa ccacaccgag
      961 taaagataaa gatgcccgtt ggacaaagaa aaacggttta tacagactcg gttacaaaca
     1021 acatacccgt accgatgagg aaggctatat caagaaactg cacatcaccc c
//
LOCUS       DBBZXU010000210         1035 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.210, whole genome shotgun sequence.
ACCESSION   DBBZXU010000210 DBBZXU010000000
VERSION     DBBZXU010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 1035)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1035)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1035
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.210"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>1035
                     /locus_tag="ACJJDE_002115"
     CDS             <1..>1035
                     /locus_tag="ACJJDE_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7541963.1"
                     /translation="QEGLTGAGAAIVVIIVTALTYGYGAAAAGSVTAAGSSTAAAATT
                     TAAATTTVSTAAAMQTAALASLYSQAAVAIINNKGDVGKALKDLGTSDTVKQIVTSAL
                     TAGALNQMGADIAQLNSKVRTELFSSTGNQTIANLGGRLATNLSNAGISAGINTAVNG
                     GSLKDNLGNAALGALVNSFQGEAASKIKTTFSDDYVAKQFAHALAGCVSGLVQGKCKD
                     GAIGAAVGEIVAESILGGRNPATLSDAEKHKVISYSKIIAGSVAALNGGDVNTAANAA
                     EVAVVNNALNFDSTPTNAKKHQPQKPDKTALEKIIQSIMPAHAAGAMTNPQDKDAAIW
                     ISNIRNGITGP"
BASE COUNT          302 a          249 c          276 g          208 t
ORIGIN      
        1 acaggaaggc ttgaccggag ccggtgcagc gattgtggtg attattgtaa ccgctctaac
       61 ttatggatac ggagcggctg cagcgggtag cgtaactgcc gcaggaagta gtacagccgc
      121 agctgcaaca acgacagcgg cagcaactac cactgtttct actgcagctg ccatgcaaac
      181 cgcagcttta gcctccttgt atagccaagc agctgtagcc atcatcaata ataaaggcga
      241 tgtaggcaaa gcattaaaag atctcggcac cagtgatacg gtcaagcaga ttgttacttc
      301 cgcactgacg gcgggtgcat taaaccagat gggagcagat attgcccaat tgaacagcaa
      361 ggtaagaacc gaactgttca gcagtacggg caatcaaacc attgccaacc ttggaggcag
      421 attggccacc aacctcagca atgcaggtat ctcagctggt atcaataccg ccgttaacgg
      481 cggcagcttg aaagacaact taggcaatgc cgcattggga gcattggtta atagcttcca
      541 aggggaagcc gccagcaaaa tcaaaacaac cttcagcgac gattatgttg ccaaacagtt
      601 cgcccacgct ttggcgggtt gtgttagcgg actggtacag ggaaaatgta aagatggggc
      661 aattggcgca gcagttgggg aaatcgtagc tgaatccata cttggcggca gaaaccctgc
      721 tacactcagc gatgcagaaa agcataaagt tatcagttac tcgaagatta ttgcgggcag
      781 cgtggcggca ctcaacggcg gcgatgtgaa tactgcggcg aatgcggctg aggtagctgt
      841 ggtgaataat gctttgaatt ttgacagcac ccctaccaat gcgaaaaagc atcaaccgca
      901 gaagcccgac aaaaccgcac tggaaaaaat catccaaagt attatgcctg cacatgcggc
      961 aggtgcgatg actaatccgc aggataagga tgctgccatt tggataagca atatccgtaa
     1021 tggcatcaca ggccc
//
LOCUS       DBBZXU010000211          989 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.211, whole genome shotgun sequence.
ACCESSION   DBBZXU010000211 DBBZXU010000000
VERSION     DBBZXU010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 989)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 989)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..989
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.211"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..180
                     /locus_tag="ACJJDE_002116"
     CDS             <1..180
                     /locus_tag="ACJJDE_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541964.1"
                     /translation="LAEGYTYFFNENTDDCYVLKEDFINNERYEKTELYSQKDKVILF
                     PKFGEYDLVLNPDII"
     gene            554..826
                     /locus_tag="ACJJDE_002117"
     CDS             554..826
                     /locus_tag="ACJJDE_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002214440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541965.1"
                     /translation="MNKRMKMCPACQQGYLYHSKPKYLHDEIILCDECDAVWLKGMNI
                     FYGEYEKDFYSYVPFMESQGITSECIWEGDLFDHPYYEDENSNDMD"
BASE COUNT          352 a          140 c          201 g          296 t
ORIGIN      
        1 ttagcagaag gatatactta tttcttcaat gaaaatacgg atgattgcta tgttttgaaa
       61 gaggatttta ttaataatga gcgatatgaa aaaacagaat tatattccca aaaagataag
      121 gtaattctat ttccaaagtt tggtgaatat gatttggtgt taaatccgga cattatttaa
      181 ttaagtttta aggccgtctg aaaaaaattt caaacggctt ttattattgg gtttggaatc
      241 tgaggataaa gctgataaaa accaggaaat tatcaggttg agacctttgc aaaaatagtc
      301 tgttaacgaa atttgacgca taaaaatgcg ccaaaaaatt ttcaattgcc taaaaccttc
      361 ctaatattga gcaaaaagta ggaaaaatca gaaaagtttt gcattttgaa aatgagattg
      421 agcataaaat tttagtaacc tatgttattg caaaggtctc aggttgctat atacgtattg
      481 ttgtacagac taaaggcagc aatcaaatca ctactgctta cccacaaaaa taaatcgatt
      541 atatggagta atcatgaata agagaatgaa aatgtgtcct gcttgtcaac aaggctatct
      601 ctaccattcg aaacctaaat atcttcatga tgaaattatt ctgtgtgatg aatgcgatgc
      661 agtatggctc aaaggtatga atatatttta tggagaatat gaaaaagatt tttattctta
      721 tgttcctttc atggaatccc aaggtataac gagtgaatgt atttgggaag gagatttgtt
      781 tgatcatcca tattatgaag atgaaaactc aaatgatatg gattgatgga aattttaagc
      841 ctgcgtaggt acgattagcc atcaaacggc gtaatcatac gcaagattat caacagagag
      901 ggctggcagc gatataccac ccacaagatt gcccatgcca tagcgggctg tgcggcagcg
      961 gcggcgaata agggtaagtg tcaggatgg
//
LOCUS       DBBZXU010000212          988 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.212, whole genome shotgun sequence.
ACCESSION   DBBZXU010000212 DBBZXU010000000
VERSION     DBBZXU010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..988
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.212"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(17..955)
                     /locus_tag="ACJJDE_002118"
     CDS             complement(17..955)
                     /locus_tag="ACJJDE_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002222013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541966.1"
                     /translation="MDAYTEAEAPPQSIVELVPVLIAVTDGGLRVLTVAQGTLLPNGP
                     LSPLRNSLQAGVKLWVAKQTSQPMGYVEQLYTFVDTHRRNEHGMPVLYVSYLGLVREA
                     ADSILHPDAKWQDCYGYFPWEDLRTDGGQRDAVVSRLRIWANSADTEEVRQMRLKRIH
                     LCWGVEPENWSEEYVLQRYEMLYESGLIVEAAEPQANFDFALTGQPMRHDHRRVLATA
                     LSRLRAKIKYRPVIFELMPPEFTLLQLQNSVEAISGRLLHKQNFRRQIQQQNLIEPSD
                     TGVSGSKGRPAQLCRFRDDVLPDRLISDIGLPLGSR"
BASE COUNT          182 a          280 c          315 g          211 t
ORIGIN      
        1 gtcgtctgaa aacgggctaa cggctgccca gcggcaatcc gatgtccgaa atcagcctgt
       61 cgggcaggac gtcgtcgcgg aagcggcaaa gctgcgcggg acggcctttg ctgcccgata
      121 cgccggtatc cgacggctcg ataaggtttt gctgctgaat ctggcggcgg aagttttgct
      181 tgtgcagcaa tcttccgctg atggcttcga cactgttttg cagttgcagc agcgtgaatt
      241 cgggcggcat cagttcaaaa atcacggggc ggtatttgat tttggcgcgc aggcgggaca
      301 gggcggtcgc cagtacgcga cggtgatcgt ggcgcatggg ctgccccgtg agcgcgaagt
      361 cgaagtttgc ctgcggctcg gcggcttcca ctatcagacc gctttcatac agcatttcat
      421 agcgttgtaa aacgtattct tccgaccagt tttccggttc gaccccccag cacaaatgaa
      481 tgcgcttgag ccgcatttga cgcacttcct ccgtgtccgc cgaatttgcc caaatgcgca
      541 ggcggctgac gacggcgtcg cgctgcccgc cgtcggtgcg caagtcttcc cacgggaaat
      601 agccgtagca gtcctgccat ttcgcatccg ggtgcaggat gctgtcggct gcctcgcgca
      661 ccagccccaa atagctgacg tacaagacgg gcatgccgtg ttcgttgcgg cggtgggtat
      721 cgacaaaggt gtaaagctgt tccacatagc ccataggctg cgaagtctgc ttggcaaccc
      781 acagcttcac gcccgcctgc agggaattgc gcagagggga gagcgggccg ttgggcagga
      841 gtgtgccttg ggcgacggtt aatacccgca ggccgccgtc ggtaacggca atcaatacgg
      901 gaaccagctc gacgatgctt tgcggcgggg cttcggcttc ggtgtaggca tccatgctcg
      961 gctttctgcg ggtgggaaag gctttatt
//
LOCUS       DBBZXU010000213          986 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.213, whole genome shotgun sequence.
ACCESSION   DBBZXU010000213 DBBZXU010000000
VERSION     DBBZXU010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 986)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 986)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..986
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.213"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..534
                     /locus_tag="ACJJDE_002119"
     CDS             <1..534
                     /locus_tag="ACJJDE_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide biosynthesis protein"
                     /protein_id="HGG7541967.1"
                     /translation="LLASALCLTGIFSPLASLLLPENYAAVRFIVVSCMLPPLFCTLV
                     EISGIGLNVVRKTRPIALATLGALAANLLLLGLAVPSGGARGAAVACAASFWLFFVFK
                     TESSCRLWQPLKRLPLYMHTLFCLASSAAYTCFGTPANYPLFAGVWAVYLAGCILRHR
                     KDLHKLFHYLKKQGFPL"
     gene            531..>986
                     /locus_tag="ACJJDE_002120"
     CDS             531..>986
                     /locus_tag="ACJJDE_002120"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002258336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7541968.1"
                     /translation="MKIILTTSMSGLGGTETATVRLGRLLKRRGHDIILASSDGPFVG
                     EAQASGIRWQPVDFYWGGLAGYLKSTFAYARMLRREQPDIIDCQMARVVPACALAAKI
                     VSPKTKIIYHSHGLDAATYPKIAKLFDKLGVYIIGNCKHEREKLIRHGFP"
BASE COUNT          178 a          333 c          256 g          219 t
ORIGIN      
        1 ctgcttgcct ccgccctctg cctgaccggc attttctcgc ccctcgcctc cctcctgctg
       61 ccggaaaact acgccgccgt ccggtttatc gtcgtatcgt gtatgctgcc gccgctgttt
      121 tgcacgctgg tagaaatcag cggcatcggt ttgaacgtcg tccgaaaaac acgcccgatc
      181 gcgctcgcca ccttgggcgc gctggcggca aacctgctgc tgctggggct tgccgtaccg
      241 tccggcggcg cgcgcggcgc ggcggttgcc tgtgccgcct cattttggct gttttttgtt
      301 ttcaagaccg aaagctcctg ccgcctgtgg cagccgctca aacgcctgcc gctttatatg
      361 cacacattgt tctgcctggc ctcctcggcg gcctacacct gcttcggcac gccggcaaac
      421 taccccctgt ttgccggcgt atgggcggta tatctggcag gctgcatcct gcgccaccgg
      481 aaagatttgc acaaactgtt tcattatttg aaaaaacaag gatttccatt atgaaaatca
      541 tcctgaccac ttctatgtcg ggcttgggcg gcacggaaac cgccaccgtc cgcctcgggc
      601 ggctgctcaa acggcgcggg cacgacatca tccttgcttc ttcggacggg ccttttgtcg
      661 gagaggcgca agcatcgggc atccgttggc agccggttga tttttactgg ggcgggcttg
      721 ccggctacct caaaagcacc tttgcctacg cccggatgct gcgccgcgaa caacccgaca
      781 tcatcgactg ccaaatggcg cgtgttgttc cagcctgcgc ccttgccgcc aaaatcgttt
      841 cgccgaaaac caaaatcatc taccactcgc acggtttgga cgcggcaacc taccccaaaa
      901 tcgccaaact cttcgacaag ctgggcgtgt acatcatcgg caactgcaaa cacgagcgcg
      961 aaaaactcat ccgccacggc ttcccc
//
LOCUS       DBBZXU010000214          956 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.214, whole genome shotgun sequence.
ACCESSION   DBBZXU010000214 DBBZXU010000000
VERSION     DBBZXU010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 956)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 956)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.214"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..397)
                     /gene="mafA"
                     /locus_tag="ACJJDE_002121"
     CDS             complement(<1..397)
                     /gene="mafA"
                     /locus_tag="ACJJDE_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003691615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin MafA"
                     /protein_id="HGG7541969.1"
                     /translation="MKTLLLLIPLVLTACGTLTGIPAHGGGKRFAVEQELVAASSRAA
                     VKEMDLSALKGRKAALYVSVMGDQGSGNISGGRYSIDALIRGGYHNNPESATQYSYPA
                     YDTTATTKSDALSSVTTSTSLLNAPAAALT"
     gene            complement(520..909)
                     /locus_tag="ACJJDE_002122"
     CDS             complement(520..909)
                     /locus_tag="ACJJDE_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541970.1"
                     /translation="MWKITKEQGQDLSFATYCLLSAAINLQEFKLWLEKVVLDMPIDN
                     IHFYIFDLIDLKEGVGDIYNILDFVPNSDLSKDQDDALTGIAFLRGIDVYDPPVSKEK
                     ALKALKKHPEIYQRFQHFFPFVELPPL"
BASE COUNT          235 a          183 c          262 g          276 t
ORIGIN      
        1 tagtcagggc ggcggcgggg gcgtttaaga gcgatgtgga agtggttacg ctggagagcg
       61 cgtcggattt ggtggtggcg gtagtgtcgt aggcggggta gctgtattgg gtggcacttt
      121 cggggttgtt gtggtagcca ccgcgtatca gtgcgtcgat agagtagcgt ccgccgctta
      181 tgttgcccga accttggtcg cccataacgg agacgtaaag ggcggctttg cgtcctttca
      241 gggcggacaa atccatttct ttgacggcgg cgcgggacga tgcggcgacg agttcctgtt
      301 cgacggcaaa gcgtttgccg ccgccgtggg cgggtatgcc ggtcagtgtg ccgcaggcgg
      361 ttaggacgag ggggatgagg aggagcaggg ttttcatagc ggggtttgtt tgatgttgaa
      421 cggattttga gtgtaaaggg attttaaggg tttgtaaaca aaaggggcga aaatgccgtc
      481 tgaacggcgg aacggtcttt cagacggcat tttgactgtt taaagcgggg gcagttctac
      541 aaacggaaag aaatgctgaa acctctgata aatttcagga tgtttcttta aggcttttaa
      601 tgctttttct tttgaaacgg gagggtcata gacatctata ccccttaaga aggcaatgcc
      661 tgttaatgcg tcatcttggt ctttagataa gtctgaattc ggaacaaaat ccaaaatatt
      721 ataaatatct cctactcctt ctttaagatc aattaaatca aaaatataaa aatgtatatt
      781 atcaataggc atatctaaga caaccttctc caaccataat ttaaattctt gcaaattaat
      841 tgctgccgat aataagcaat atgttgcaaa acttaaatct tgaccttgct ctttcgtaat
      901 tttccacata attatcttcc tttgccgtca aacgctcttt tggttacctg ctttgt
//
LOCUS       DBBZXU010000215          952 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.215, whole genome shotgun sequence.
ACCESSION   DBBZXU010000215 DBBZXU010000000
VERSION     DBBZXU010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 952)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 952)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..952
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.215"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            58..783
                     /locus_tag="ACJJDE_002123"
     CDS             58..783
                     /locus_tag="ACJJDE_002123"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003712687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HGG7541971.1"
                     /translation="MPRFYLPENLSVGQTVALPDNIVRHLNVLRVRPNENITLFDGKG
                     KAHAAQLTVLEKRRAEAEILHEDTTDNESPLNITLIQSISSGDRMDFTLQKSVELGVT
                     AIQPVISERCIVRLDGERAAKRLARWQEIVISACEQSGRNTVPPVLPIIGYREALDKM
                     PSESTKLIMSINRARKLGDIRQPSGAIVFMVGPEGGWTEQEEQQAFDAGFQAVTLGKR
                     ILRTETAPLAALAAMQTLWGDFA"
BASE COUNT          251 a          328 c          212 g          161 t
ORIGIN      
        1 tgtccgtttc catcacgccg ctgcgacaga ttataaccgt ccgaaccgcc aaaaactatg
       61 ccccgattct acctgcccga aaacctttcc gtcggacaaa ccgtcgccct gcccgacaac
      121 atcgtccgcc acctcaacgt cctacgcgtc cgccccaacg aaaacatcac cctcttcgac
      181 ggcaaaggca aggcacacgc cgcacagctg accgttttgg aaaaacgccg cgccgaagcc
      241 gaaatcctgc acgaagacac aaccgacaac gagtccccgc tcaacatcac actgatacaa
      301 tccatctcct ccggcgatcg catggatttc accctgcaaa aaagcgtcga actcggcgta
      361 accgccatac agcccgtcat cagcgaacgc tgcatcgtcc gcctcgacgg agaacgcgcc
      421 gccaaacgcc tcgcacgctg gcaggaaatc gtcatctccg cgtgcgaaca aagcggcagg
      481 aacaccgttc cccccgtact gcccatcatc ggctaccgtg aagcactcga caaaatgccg
      541 tctgaaagca ccaagctgat tatgagcatc aaccgcgccc gcaaactcgg cgacatccgc
      601 caaccgtccg gcgcaatcgt ctttatggtc gggcctgaag gcggctggac agaacaggaa
      661 gaacaacagg catttgatgc cggctttcag gcggttacac tcggcaaacg gattttacgc
      721 acagaaaccg ccccactcgc cgccctcgcc gccatgcaga cgctttgggg cgatttcgca
      781 taaacagaaa tgccgtctga aacccgttca gacggcattt tgcagccgat taagatagta
      841 ggttcaaata agatttcccg tgtcgtcatt cccgcgaaag cgggaatcta gaaacgaaaa
      901 actacaggga tttatccgaa acaacaaccc tctccgccgt cattcccgcg ca
//
LOCUS       DBBZXU010000216          946 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.216, whole genome shotgun sequence.
ACCESSION   DBBZXU010000216 DBBZXU010000000
VERSION     DBBZXU010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.216"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(95..874)
                     /locus_tag="ACJJDE_002124"
     CDS             complement(95..874)
                     /locus_tag="ACJJDE_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002212609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FadR/GntR family transcriptional regulator"
                     /protein_id="HGG7541972.1"
                     /translation="MKLVRPQKISDQVLSVLEERIAEGVYAEGGKIPPERVLAEEFGV
                     SRPSVRSALNVLVARQVLEARQGDGYYVSVKPQQDFLQSWQELLGKHSNWEQDVFDFS
                     CHIEGCMAALAAERRTDADLKRIGFWLEKFEEACESGNLEHQSEADVSFHQTIADAAH
                     NLLFSHLSGGLLKMLYRQTRSSLIYLNQEEDPRPKLMAQHRVLYEAISNRRPGEASEA
                     AKAHLNYVASSIMKDREYQSRNRHADTLAQNDLKRVQDWEV"
BASE COUNT          231 a          299 c          190 g          226 t
ORIGIN      
        1 ttctctttga gctaaggcga ggcaacgacg tactggttta aatttagttc actataccga
       61 tacatccgaa tatgccagac cgtctaaacg gtattcatac ctcccaatcc tgcacgcgct
      121 tcaaatcgtt ttgcgccaaa gtatccgcgt ggcggttacg gctctgatat tccctgtctt
      181 tcatgatgct gcttgccaca taattcaaat gtgcctttgc cgcctccgaa gcctcgcccg
      241 gccgacggtt cgatatcgcc tcatacagca cgcggtgctg cgccatcagt ttcggacgcg
      301 gatcttcttc ctgattcaga taaataaggc tgctgcgcgt ctgccggtac agcattttca
      361 acaaaccgcc cgacaaatgg ctgaacaaca aattgtgcgc cgcatccgca atcgtctgat
      421 ggaagctgac atcggcttcg ctctgatgtt ccagattgcc gctttcgcac gcctcctcaa
      481 acttttcaag ccaaaaccca atccgcttca aatcggcatc cgtccggcgt tctgccgcca
      541 atgccgccat acagccctcg atgtggcagc tgaaatcaaa aacatcctgt tcccaattgg
      601 aatgcttgcc caaaagctcc tgccaacttt gcaaaaaatc ctgctgcggc ttgaccgaaa
      661 cataataacc gtctccctgc ctcgcttcca aaacctgacg ggcaaccaaa acattcaatg
      721 ccgaccggac cgacgggcgc gaaacgccga actcttccgc caaaacgcgt tcgggcggaa
      781 tcttgccccc ttccgcgtaa accccttccg caatgcgctc ctccaatacc gacaatacct
      841 gatcgctgat tttctgaggc cttaccagtt tcatcactcc tcctttataa agattccctg
      901 cagaaccctt ccgaaatata gtggattaac aaaaatcagg acaagg
//
LOCUS       DBBZXU010000217          921 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.217, whole genome shotgun sequence.
ACCESSION   DBBZXU010000217 DBBZXU010000000
VERSION     DBBZXU010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.217"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(170..565)
                     /locus_tag="ACJJDE_002125"
     CDS             complement(170..565)
                     /locus_tag="ACJJDE_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7541973.1"
                     /translation="MMYSFEANANAVKISETVSVDTGQGAKIHKFVPKNSKTYSSDLI
                     KTVDLTHIPTGAKARINAKITASISRAGVLAGGGKLARLGAKFSTRAVPYVGTALLAH
                     DVYETFKEDIQARGYQYDTETDKFAKVSG"
     gene            complement(549..866)
                     /locus_tag="ACJJDE_002126"
     CDS             complement(549..866)
                     /locus_tag="ACJJDE_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1132 family protein"
                     /protein_id="HGG7541974.1"
                     /translation="MNKPFITQAQLALYKYQPSSKYFGQSMAVIAQSEFVEFAKINKS
                     ENVIDCFSFFWNRRIKHDIWLISFSDNSEMVIKESLKDGHKIYKFEFCEIVDNCNFDD
                     VFV"
BASE COUNT          246 a          210 c          170 g          295 t
ORIGIN      
        1 agagaccttt gcaaaattcc tttccctccc gacagccgaa acccaaacac aggttttcgg
       61 ctgttttcgc cccaaatacc tcctaatttt acctaaatac ccccttaatc ctccccggat
      121 acccgataat caggcatccg ggttactttt taggcggcaa caggcgcact tagcctgaga
      181 cctttgcaaa tttgtcggtt tcggtgtcgt attggtagcc tcgtgcctgt atgtcttctt
      241 tgaaagtttc gtatacgtcg tgggctaaaa gggctgttcc gacataggga accgcccttg
      301 tgctgaattt cgcgcctaag cgggcaagtt tgccgccccc cgccaatacg ccggcgcggg
      361 aaatgctggc ggttattttg gcgttgattc gggcttttgc gcccgtaggg atgtgtgtta
      421 aatctaccgt ttttattaaa tcagatgaat aagttttact atttttaggt acaaacttat
      481 gaattttcgc accttgtccg gtatcaactg aaacagtttc agatattttt actgcatttg
      541 cattcgcttc aaacgaatac atcatcaaaa ttgcaattat cgacaatttc gcaaaattca
      601 aatttgtata ttttatgacc atctttcagg gattctttaa ttaccatttc tgaattatca
      661 gaaaatgaga ttagccaaat atcatgttta attcttctat tccagaaaaa agagaaacaa
      721 tcaataacat tttcagactt attaatcttc gcaaattcaa caaattcaga ttgcgctata
      781 accgccatcg attgcccaaa atacttgctt gacggctgat atttataaag tgccaactgc
      841 gcctgagtga taaacggctt gttcatggtt ctgcctttca atgattgttt tgaaagcctg
      901 attttgacac cataacttca t
//
LOCUS       DBBZXU010000218          905 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.218, whole genome shotgun sequence.
ACCESSION   DBBZXU010000218 DBBZXU010000000
VERSION     DBBZXU010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 905)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 905)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..905
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.218"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..215
                     /locus_tag="ACJJDE_002127"
     CDS             <1..215
                     /locus_tag="ACJJDE_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002261583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541975.1"
                     /translation="DAGDVYCVYNIRLKQYTACQVTRVEEHGGKKTRATLLALDWQGN
                     KPLGAAELADLKPLYKDLKNNIGNIV"
     gene            546..>905
                     /locus_tag="ACJJDE_002128"
     CDS             546..>905
                     /locus_tag="ACJJDE_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004467674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gliding motility protein"
                     /protein_id="HGG7541976.1"
                     /translation="MYWERGLHMYKASAVVPTGYVRVGNTAPLVGEDTQRYASFWGDG
                     YDVYRQLRWQQIPEKQRKAFKKAAKSKKTVMFAGREYGISKQNLSDVWDDFEDAMELK
                     AFPCLSSLFLTKWHKNLY"
BASE COUNT          280 a          149 c          212 g          264 t
ORIGIN      
        1 ctgatgccgg agacgtatat tgcgtctata acatcagact gaagcagtac actgcctgcc
       61 aggttacccg agttgaagaa cacggtggca aaaaaacacg tgcgaccctg ctggctttgg
      121 actggcaggg caacaaaccg cttggggcgg cggaactggc ggatttgaaa ccgctttaca
      181 aagacttaaa gaataatatt ggaaatattg tatgaacaaa aaattaaact atatttttat
      241 gttggactgt ttagggttgg tgatattgtt tacttgtata atagctactt ttgaaagaga
      301 ttatggattt aaaattttta ctaattctaa gaggcctgaa ttttattatt ggattggaat
      361 gttttattat ggaattattt cttgctggtt tgattatcaa ttaatttcaa caaaggcgaa
      421 ttcgtataaa agaaaagtta aacaatataa aattttttca gtaatatttt cagttttgat
      481 atttatttct actatagtaa aactttaaat tttggagcaa aaatttatga gcgattcaat
      541 tgaatatgta ttgggaacgc ggtctgcaca tgtataaggc aagtgccgtc gtgccgacgg
      601 gatatgtacg ggttgggaat accgcgccgc tggtcggcga agacacgcaa cggtatgcct
      661 ctttttgggg cgacggctac gacgtgtacc gtcagttgag atggcagcag atacccgaaa
      721 aacagagaaa ggcattcaaa aaagccgcca aaagcaaaaa gaccgtgatg tttgccggac
      781 gggaatacgg catatccaaa cagaatttga gcgatgtttg ggatgatttt gaagacgcga
      841 tggaactgaa ggcgtttccc tgcctgtctt cgctgtttct gaccaaatgg cataaaaatc
      901 tatat
//
LOCUS       DBBZXU010000219          894 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.219, whole genome shotgun sequence.
ACCESSION   DBBZXU010000219 DBBZXU010000000
VERSION     DBBZXU010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 894)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 894)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..894
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.219"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>894)
                     /locus_tag="ACJJDE_002129"
     CDS             complement(<1..>894)
                     /locus_tag="ACJJDE_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7541977.1"
                     /translation="AVPYVGTALLAHDVYETFKEDIQAQGYQYDPETDKFVKGYEYSN
                     CLWYEDKRRINRTYGCYGVDSSIMRLMSDDSRFPEVKELMESQMYRLARPFWNWHKEE
                     LNKLSSLDWNNFVLNRCTFNWNGGDCLVNKGDDFRNGADFSLIRNSKYKEEMDAKKLE
                     EILSLKVDANPDKYIKATGYPGYSEKVEVAPGTKVNMGPVTDRNGNPVQVVATFGRDS
                     QGNTTVDVQVIPRPDLTPGSAEAPNAQPLPEVSPAENPANNPNPNENPGTSPNPEPDP
                     DLNPDANPDTDGQPGTRPDSPA"
BASE COUNT          188 a          206 c          221 g          279 t
ORIGIN      
        1 gcgggggaat cgggtcttgt gccgggctgt ccgtccgtat cgggatttgc atcgggattc
       61 aaatcggggt cgggttcggg attggggctc gtgccggggt tctcattggg gttcgggttg
      121 tttgcggggt tttcggcggg cgatacttcg ggcagcggct gtgcgttcgg tgcttccgcg
      181 cttccggggg tcaagtcggg acgcgggatt acttgaacat ccaccgtggt gttgccttgc
      241 gaatccctgc cgaatgttgc gacaacctga acgggattcc cgttcctgtc cgtgacggga
      301 cccatattca cttttgttcc gggtgcgact tctacttttt cggaataacc gggataaccg
      361 gttgccttta tgtatttgtc gggattggca tcgactttca acgataaaat ctcttccagc
      421 tttttggcat ccatttcttc tttgtatttt gaattgcgaa taagggaaaa atcagcccca
      481 tttctgaaat catcaccttt attgaccaaa caatctccgc cattccaatt aaatgtgcaa
      541 cgatttaaaa caaaattatt ccaatccaaa gaacttaatt tattcagttc ttctttatgc
      601 caattccaaa acggacgtgc cagcctatac atttggcttt ccatcaattc tttgacttcg
      661 gggaatctgc tgtcatcgga cataaggcgc ataatcgaac tgtcaacgcc gtagcagcca
      721 taggttctat taatacgtct tttgtcttcg taccaaaggc aattactata ttcgtagcct
      781 tttacaaatt tgtcggtttc ggggtcgtat tggtagcctt gtgcctgtat gtcttctttg
      841 aaagtttcgt atacgtcatg ggctaaaagg gctgttccga cataaggaac tgcc
//
LOCUS       DBBZXU010000220          858 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.220, whole genome shotgun sequence.
ACCESSION   DBBZXU010000220 DBBZXU010000000
VERSION     DBBZXU010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 858)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 858)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..858
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.220"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          257 a          198 c          198 g          205 t
ORIGIN      
        1 aacctagatt cccgcctgcg cgggaatgac gaaaagcaac ctttccgcgt ccttcccgca
       61 aaagcgggaa tctagaacct ctaacgtggc aggaatctat cggaaatgac tgaaaccgaa
      121 cagactggat tcccgcctgt gcgggaatga cgaagcctgc gtgggaatga cgaaaagcaa
      181 cctttccgtg tcattcccgc aaaagcggga atctaggaac tcaaagctgc aagaatttat
      241 cagaaacaac tggaacttaa aaaaactaga ttcccgcctg cgcgggaatg acgaagggtt
      301 aaagaaatga cgagaaacgg cggtaattta tcgggaataa ccgaaaacga acggaaatca
      361 ggacaaggcg acgaagccgc agacagtaca aataggacgg aaccgattca cttggtgctt
      421 gagcacctta gagaatcgtt ctctttgagc taaggcgagg caacgacgta ctggtttttg
      481 ttcatccact ataacagcaa ccctgtcgcc gtcattcccg cgaaagcggg aatccagtcc
      541 gttcagtttc ggtcatttcc gataaattcc tgttgctttt catttttaga ttcccacttt
      601 cgtgggaatg acggcggaag ggttttggtt ttttccgata aattcttgag gcattgaaat
      661 tccagattcc cgcctgcgcg ggaatgacgg cggagcggtt tctgtttttt ccgataaatt
      721 cctaaaactt aaaatttcat cattccctca aaaacagaaa accaaaaaca gaaacctaaa
      781 attcgtcatt cccacgaaag tgggaatcta gaatcccgga ctttcagata atctttgaat
      841 attgctgttg ttctaagg
//
LOCUS       DBBZXU010000221          843 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.221, whole genome shotgun sequence.
ACCESSION   DBBZXU010000221 DBBZXU010000000
VERSION     DBBZXU010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 843)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 843)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..843
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.221"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(156..770)
                     /locus_tag="ACJJDE_002130"
     CDS             complement(156..770)
                     /locus_tag="ACJJDE_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000615741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CadD family cadmium resistance transporter"
                     /protein_id="HGG7541978.1"
                     /translation="MIQNVVTSIILYSGTAVDLLIILMLFFAKRKSRKDIINIYLGQF
                     LGSVSLILLSLLFAFVLDYIPSKEILGLLGLIPIFLGIKVLLLGDSDGEAIAKEGLRK
                     DNKNLIFLVAMITFASCGADNIGVFVPYFTTLNLANLIVALLTFLVMIYLLVFSAQKL
                     AQVPSVGETLEKYSRWFVAVVYLGLGIYILVENNSFDMLWTVLG"
BASE COUNT          318 a          168 c          130 g          227 t
ORIGIN      
        1 tgagaaaaaa tggacggatt gccaagtgta gcaaatattc gcacaaaggt cgtgcagaga
       61 ctgcttcaga cggcatcaga cacaaaaaga ccggcaacaa aaaagactgc acatggcagt
      121 ctttgcagat actatctttt tcataatatt ttttcctagc ccaacacagt ccatagcata
      181 tcaaaactgt tgttttcaac caggatatat atccccaatc ctaaataaac aacagcaaca
      241 aaccatctgc tatatttttc caaagtttct ccaacagaag ggacttgtgc taatttttgg
      301 gcagaaaaaa ccaagagata aatcatgact agaaaggtaa gtaaagccac tatcaaattc
      361 gctaaattta aggtagtaaa atatgggaca aagacaccaa tattgtcagc accacaactt
      421 gcaaaagtaa tcatagcgac tagaaaaatc aggtttttat tatctttgcg caaaccctct
      481 ttggcaatag cctctccatc agaatctcct aacagcaaaa ctttgatgcc taggaaaatt
      541 ggaatcaagc cgagcaaacc taaaatctct ttactaggaa tataatctaa gacaaatgca
      601 aaaagcaaac ttagcaatat caggctaaca gagcctagaa attgtcctaa atagatgtta
      661 atgatgtctt ttctgctttt tcttttggca aaaaataaca ttaggataat aagtaagtct
      721 acggctgtcc cagaatacag gattattgaa gtaacaacat tttgaatcat aaaacatctc
      781 attcaaatat atttttaaat gtattcaaac attaaacctt gtagatgtca acttcaaccc
      841 cgt
//
LOCUS       DBBZXU010000222          835 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.222, whole genome shotgun sequence.
ACCESSION   DBBZXU010000222 DBBZXU010000000
VERSION     DBBZXU010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 835)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 835)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..835
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.222"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..800
                     /locus_tag="ACJJDE_002131"
     CDS             <1..800
                     /locus_tag="ACJJDE_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002220624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7541979.1"
                     /translation="QPQKTFSSLLFSSLLFSSLLFSSAAQAASEDGSRSPYYVQADLA
                     YAAERITHDYPQATGANNTSTVSDYFRNIRAHSIHPRVSVGYDFGGWRIAADYARYRK
                     WNNNKYSVNTKNVQKNDNGNRQDLKTENQENGTFHAVSSLGLSAIYDFKLNDKFDKFK
                     PYIGVRVAYGHVRHSIDSTKKTTNVVTVAGAANTAPTIYYAPETQNAYHESHSIRRLG
                     LGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFKTHEVSLGMRYRF"
BASE COUNT          229 a          252 c          171 g          183 t
ORIGIN      
        1 tccagcccca aaaaaccttc tcttctcttc tcttctcttc tcttctcttc tcttctcttc
       61 tcttctcttc cgcagcgcag gcggcaagtg aagacggcag tcgcagcccg tattatgtgc
      121 aggcggattt agcctacgcc gccgaacgca ttacccacga ttatccgcaa gcaaccggtg
      181 caaacaacac aagcacagta agcgattatt tcagaaacat ccgtgcgcat tccatccacc
      241 cccgggtgtc ggtcggctac gactttggcg gctggagaat agcggcagat tatgcccgtt
      301 acagaaaatg gaacaacaat aaatattccg tcaacacaaa aaatgtgcaa aaaaacgaca
      361 atggcaacag gcaagacctg aagacggaaa atcaggaaaa cggtacattc cacgccgttt
      421 cttctctcgg cttatccgcc atttacgatt tcaaactcaa cgataaattc gataaattca
      481 aaccctatat cggtgtgcgc gtcgcctacg gacacgtcag acacagcatc gattcgacca
      541 aaaaaacaac aaatgttgtt accgtcgccg gtgctgctaa cacagcacct acgatttatt
      601 atgcaccaga gacgcaaaac gcctatcacg aaagccacag catccgccgc ttgggtcttg
      661 gtgtcatcgc cggtgtcggt ttcgacatca cgcccaagct gaccctggac accggatacc
      721 gttaccacaa ctggggacgc ttggaaaaca cccgcttcaa aacccacgaa gtctcattgg
      781 gcatgcgcta ccgcttctga ttccccgata ccgatgccgt ctgaaccttc agacg
//
LOCUS       DBBZXU010000223          815 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.223, whole genome shotgun sequence.
ACCESSION   DBBZXU010000223 DBBZXU010000000
VERSION     DBBZXU010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..815
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.223"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            586..>815
                     /locus_tag="ACJJDE_002132"
     CDS             586..>815
                     /locus_tag="ACJJDE_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic/DOC family N-terminal domain-containing
                     protein"
                     /protein_id="HGG7541980.1"
                     /translation="MSNWKPDIPYNDLPPLPPKQDIESKTILKRCIAARASLARLKQA
                     AELIPNQAMLINTLPVMEARASSEIENIVTTT"
BASE COUNT          238 a          180 c          164 g          233 t
ORIGIN      
        1 ggaaacctgc atcccgtcat tcccacgaac ctacattccg tcattcccac gaaagtggga
       61 atccagtttt ttgagtttca gtcattcccg ataaattgcc ttagcattga atgtctagat
      121 tcccgccttc gcgggaatga cgggatttga ggtttctgtt tttgattttc tgttttcgta
      181 ggaatgacgg tttaaaagtt acccgaaacc tcaaaaaaaa ggctgtgttt taatatagtg
      241 ttgatagacg tacttggctg ccatgtattc aatcgtggaa atctatatct tcgtcctcgc
      301 cgaaatagtc tatgcccgat atacaatttt gatacacaaa cttggaaata tgggtatcgt
      361 cgccggagcg atagaatgcg gacagttata tatatacggt ttttttaggg aagcgggcag
      421 atgaagggcg ggcggatttt gaattaaccc catgcaaatt gacttttgcg ggcggtttta
      481 cctcccatat acttacaaaa gccaaatttt taaacatata tccttgatat atacacggcg
      541 taaacatata ctggaaacat ctttaaattt tccgaaattt taaatatgag caactggaaa
      601 cccgatattc cctataacga tttaccaccc ctgccgccaa aacaggatat tgaaagcaaa
      661 accatcctga aacgttgtat agccgcccgt gcatcccttg cccgtttaaa gcaggcggca
      721 gaattgatac cgaatcaagc catgctgatt aacacccttc ctgttatgga agcccgtgca
      781 agttcggaaa ttgaaaacat cgtaaccacc acgga
//
LOCUS       DBBZXU010000224          813 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.224, whole genome shotgun sequence.
ACCESSION   DBBZXU010000224 DBBZXU010000000
VERSION     DBBZXU010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.224"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..347
                     /locus_tag="ACJJDE_002133"
     CDS             <1..347
                     /locus_tag="ACJJDE_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002235084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="opacity family porin"
                     /protein_id="HGG7541981.1"
                     /translation="DKFDKFKPYIGARVAYGHVKHQVHSVRKETTTTFSKAGAGATEP
                     GKIISGPISKPAYHESHSISSLGLGVIAGVGFDITPKLTLDTGYRYHNWGRLENTRFK
                     THEVSLGMRYHF"
BASE COUNT          213 a          240 c          186 g          174 t
ORIGIN      
        1 acgataaatt cgataaattc aaaccctata tcggtgcgcg cgtcgcctac ggacacgtta
       61 aacatcaggt tcattcggtg agaaaagaaa ccacgactac tttcagtaaa gcaggggcag
      121 gtgctacaga gccaggcaaa attatatcag gtccgatctc caaacctgcc tatcacgaaa
      181 gccacagtat cagcagcttg ggtcttggtg tcatcgccgg tgtcggtttc gacatcacgc
      241 ccaagctgac cttggacacc ggataccgtt accacaactg gggacgcttg gaaaacaccc
      301 gattcaaaac ccacgaagtc tcattgggca tgcgctacca cttctgattc cccgataccg
      361 atgccgtctg aaccttcaga cggcattttt gatgcactcg ccgtttacag gcgcggggcg
      421 ggcgtggaaa tacccgaacc gtcattcccg acaacaccgt aatcttgaaa cccgccattc
      481 ccgataacag cgcaatcttg aaacccgtca ttcccgcgca ggcgggaatc cagccccctg
      541 acgcggcggg aatctatcgg aaatgactga aaccccgaga ttctagattc ccactttcgt
      601 gggaatgacg tggtgcaggt ttccgtatgg atggattcgt cattcccgac aacaccgcaa
      661 tcttgaaacc cgtcattccc gcacaggcgg gaatccagac ctgtccgcac agaaacttat
      721 cggataaaaa cagttgccca aaccccgcgt tctagattcc cactttcgtg ggaatgacga
      781 ttcagtttcg ttccgacaac accgtaatct cga
//
LOCUS       DBBZXU010000225          813 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.225, whole genome shotgun sequence.
ACCESSION   DBBZXU010000225 DBBZXU010000000
VERSION     DBBZXU010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 813)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 813)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.225"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            91..>813
                     /locus_tag="ACJJDE_002134"
     CDS             91..>813
                     /locus_tag="ACJJDE_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7541982.1"
                     /translation="MKIVFITTVASSIYGFRAPVIKKLIGKNHQVYAFVSEFSDNELD
                     IIREMGVTPVTYRSNRSGLNPFSDIKSTFLIFKELKKISPDLVFPYFAKPVIFGTFAA
                     KLAGVPRIVGMLEGLGFAFTPQPEGIPLKTKIIKGILIALYRIALPMLESLIVLNPDD
                     KDELTDKYGIKIKNIHILGGIGLDSRQYPYSEADIPDEKEPVKFLFIGRFLKEKGIDD
                     FIRAAEQVKDKYPDTVFTALGAI"
BASE COUNT          233 a          195 c          178 g          207 t
ORIGIN      
        1 acgcaggcaa acccaagcct tgctgggtta caggatgaaa ccctgccgta gcagaccgca
       61 tttccaatcc atattcaagg tgtccgcctt atgaaaatcg tttttatcac aacagtcgca
      121 tccagcattt acggtttccg cgcccccgtc attaaaaaat taatcggcaa aaaccatcag
      181 gtgtatgcct ttgtatcgga gttttccgat aatgaattgg atattatcag ggaaatgggg
      241 gttacacccg ttacctaccg ttcaaaccgc agcgggctga acccgttttc cgatataaaa
      301 tccaccttcc tcatctttaa agaactcaaa aaaatatcgc cggatttggt tttcccttat
      361 ttcgcaaaac ccgtgatttt cggcactttt gccgcaaaac tggcaggcgt gcccagaatc
      421 gtcgggatgc tggaaggttt gggattcgca tttaccccgc agccggaagg cataccgtta
      481 aaaacaaaaa tcataaaggg gatcttgatt gccttatacc gcattgccct gccgatgttg
      541 gaaagcctga ttgtattaaa ccccgacgac aaagacgaac tgacggacaa atacggcatc
      601 aaaataaaaa acatccatat tttgggcgga atcggtctgg attcgcggca atatccttat
      661 tccgaggcgg atattcccga tgaaaaagaa cccgtaaaat tcctctttat cggcagattt
      721 ctgaaagaaa aggggattga tgattttatt cgggcggcgg aacaggttaa ggacaaatac
      781 cccgatacgg tttttaccgc tttgggcgca atc
//
LOCUS       DBBZXU010000226          806 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.226, whole genome shotgun sequence.
ACCESSION   DBBZXU010000226 DBBZXU010000000
VERSION     DBBZXU010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 806)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 806)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..806
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.226"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            338..583
                     /locus_tag="ACJJDE_002135"
     CDS             338..583
                     /locus_tag="ACJJDE_002135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541983.1"
                     /translation="MVLELSTYCVSPSAGSVVDFDLKKRGGVGQDVFRGTPDCGGVCL
                     YFAEGFKNRVVGYIGCTVLVCARSGQGAMGKFARDAV"
     gene            573..734
                     /locus_tag="ACJJDE_002136"
     CDS             573..734
                     /locus_tag="ACJJDE_002136"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541984.1"
                     /translation="MPSEAFRRHFLFVVAWCAGCGGFPDGTADAAVPSVGFSPLLEVT
                     VGGQVVVRA"
BASE COUNT          152 a          157 c          282 g          215 t
ORIGIN      
        1 ggcaggaaaa agacccgcgc catatcgggg aatgaaccga cgcaaaggaa atgcggtttg
       61 aatatgcgtc cgggcggtgt tttactgtgt gtgccgtatg gcggggcagg gtgtctgatt
      121 tcgtgatgac cgtgttggtg gaatcgaagc ctgccgttcc ggtaagggtt gcccgggagg
      181 gcaaggccgg ctttgtatgc ccggttaaga gggaaggatg agactgtgca tttttgattt
      241 taattggcta tatgccgtct gaaaatcggt ttgaaggcgg tacttttatg ctgcctttca
      301 tacaggggaa tgggaacgtt gcggctgcgc ggaaaccgtg gtgcttgaac tttctactta
      361 ctgcgtttcg ccgtcggcgg gttcggtggt ggattttgac ctgaaaaaaa gggggggtgt
      421 tgggcaagat gtttttaggg gaacgccgga ttgcggtggg gtttgccttt attttgcaga
      481 aggctttaaa aaccgtgtgg tcgggtacat cggctgtacc gtgcttgttt gtgcaagatc
      541 ggggcagggt gcgatgggca agtttgcccg ggatgccgtc tgaagcgttc agacggcatt
      601 ttttattcgt cgtggcttgg tgcgcgggat gtggcggctt cccggacggc acggcggatg
      661 cggctgtacc atcggtcggg ttctcgccgc ttttggaggt aactgtcggc ggtcaggtgg
      721 tggtgcgggc ttgaaaaacc ggcggttagg gtgtctttat atttcacccc gtcaaaaggg
      781 cgcattatag tgaattaaca aaaacc
//
LOCUS       DBBZXU010000227          798 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.227, whole genome shotgun sequence.
ACCESSION   DBBZXU010000227 DBBZXU010000000
VERSION     DBBZXU010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..798
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.227"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            409..615
                     /locus_tag="ACJJDE_002137"
                     /pseudo
     CDS             409..615
                     /locus_tag="ACJJDE_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009311098.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015129 - lactate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015727 - lactate transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
     gene            630..798
                     /locus_tag="ACJJDE_002138"
                     /pseudo
     CDS             630..798
                     /locus_tag="ACJJDE_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003777280.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tonB dependent receptor family protein"
BASE COUNT          216 a          219 c          172 g          191 t
ORIGIN      
        1 atcaaacatc aaattggact gaccaatcag ggcggattct aatgacacgc cgttcccgcc
       61 gtcaacggca tttacctcgc accgcccccg aaacacaaga aaaaactaca ccaaactaca
      121 atttttgttt atacaaatat ttgttttgac aggatttaaa cgaaagctcc gattcaaatc
      181 tgccgaaccg cccaaaaata tatagtggat taacaaaaat caggacaagg cgacgaagcc
      241 gcagacagta cagatagtac ggtaaggcga ggcaacgccg tactggttta aatttaatcc
      301 attctattga cctgaatatt aaagtttcgc aaagtaatgc aacgttgctt taattggttt
      361 gaccactatt gccgacgatt agaaaaatat tttcggagat gttcaattat ggaaacttgg
      421 gttcaaaact acacggcaat cggcggcagc ctgtatctga ctgccgccgc cgcactctta
      481 cccatcgtct ttttctttgc cgcgctgacc gtcctgaagc tgaaaggcta tcaggcgggg
      541 ctttatacgc tgctgattgc gcttgccgtt gccgtattcg gcttcgggat gccggcgggt
      601 atggcggttt cttccctgcc gccgcagccg cactgaccca acgcccctac gccacgctgg
      661 atttgaccgc gcattacaaa atcggcaaat ccacccgcat tggtttggac tttgaaaacg
      721 tgttcaacaa acgctaccgc cctatgcccg acattcacgt ttacggcacg ccgcgcagcc
      781 tgaccgcaac cgtcaaac
//
LOCUS       DBBZXU010000228          789 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.228, whole genome shotgun sequence.
ACCESSION   DBBZXU010000228 DBBZXU010000000
VERSION     DBBZXU010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 789)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 789)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..789
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.228"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            125..640
                     /locus_tag="ACJJDE_002139"
     CDS             125..640
                     /locus_tag="ACJJDE_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002231952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541985.1"
                     /translation="MSAFRKILLIISCLLIASCSFVETIFYMAISPEPVVVDFPLGKK
                     TKRSIELKQKIGKPYAISLGTNFIHYDPKQGERWIDDKLNYPYNISVKIFKVEEDGKK
                     LIIDELLTERSRKLGGGVFGAGGKYSMHIYDFYLPEGEYLFEISDNSEYIPLYDEINN
                     SIRIVVNARIQ"
BASE COUNT          266 a           88 c          159 g          276 t
ORIGIN      
        1 actatggact tttatttcat tattttcagg cggaaatctc atagccgttt tgaatttttc
       61 tcttccttat taattatgca aataattagt atattctgat atggattttt tggagatttt
      121 tattatgtct gcatttagaa aaatattatt aataatatct tgcctattga ttgctagctg
      181 cagttttgtt gaaactattt tttatatggc tattagccca gaacctgttg tggtagactt
      241 tcctcttggt aaaaaaacaa aaagatctat tgaactcaaa cagaaaattg gtaaacctta
      301 tgcaatatcg ttaggaacta attttataca ttatgatcca aaacaggggg agaggtggat
      361 tgatgataag ttaaactatc catataatat atcggttaaa atatttaaag tggaagaaga
      421 tggtaaaaaa cttattatag atgagttgct tacagagaga agtagaaaat taggaggcgg
      481 agtatttgga gctgggggga aatatagtat gcatatttat gatttttatt tgcctgaagg
      541 ggaatattta tttgagattt ctgataatag tgaatatatt ccactttacg atgaaataaa
      601 taattctata agaatagtag ttaatgcacg aattcagtaa atttttctag aaatgtgggg
      661 ttacttatgg ctgattatta tgcgataact gtaaaatttg cgaagcaggg tacgccactg
      721 aaacaagagg gggtgtatcc aagacgggta cgtttgggtt gaactgtatt cggctagaga
      781 taaaaaaat
//
LOCUS       DBBZXU010000229          764 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.229, whole genome shotgun sequence.
ACCESSION   DBBZXU010000229 DBBZXU010000000
VERSION     DBBZXU010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..764
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.229"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>764
                     /locus_tag="ACJJDE_002140"
     CDS             <1..>764
                     /locus_tag="ACJJDE_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_process: GO:0006270 - DNA replication initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HGG7541986.1"
                     /translation="LMGSEDVLYGRVHFGGQNNTILFELTGTGCGVAKEGWESRLFAF
                     LTNAIRPKITRVDIAKDFFNGEYSPNQAREDRNKGMFTCHHVKPKGECLGSDWEEDDE
                     AKMTKGKTYGIGSRESSKYVRVYEKGKQLGDKTSTWTRFEIEFKAKDIVIPFEVLQNP
                     GEYFGGAYPICERFVQKATRIHAVKEDKVISADRYLEWVKKQFGRAANGLKFIFPELD
                     KAKLFELIEPSHHKLPKSLAPEAYDCAFLKAQAIHE"
BASE COUNT          232 a          182 c          180 g          170 t
ORIGIN      
        1 ttgatgggtt cggaagacgt cctatacggt cgcgtccatt ttggcggaca aaacaatacc
       61 attcttttcg aactgaccgg caccggttgc ggcgtcgcaa aagaaggctg ggaatcacga
      121 cttttcgcat tcctgactaa tgcaatccgc ccaaaaatca cacgcgttga catcgcaaaa
      181 gactttttca acggcgaata cagcccgaac caagcccgtg aagaccgaaa taaaggtatg
      241 tttacctgtc atcacgtcaa accaaaaggc gaatgtttgg ggtcagattg ggaagaagac
      301 gatgaagcca aaatgaccaa aggcaagacc tatggtatcg gctcccgtga atcgtccaaa
      361 tatgtccgcg tctatgaaaa aggcaagcag ttgggcgata aaacaagcac atggacgcga
      421 tttgaaattg aattcaaagc aaaagatatc gttatccctt tcgaagtttt gcagaatccg
      481 ggcgaatatt tcggcggcgc atatccgatt tgcgaacgat tcgtccaaaa ggcaacgcgc
      541 atacacgcgg ttaaggaaga taaggtcatt tcagccgacc gctaccttga atgggtaaaa
      601 aaacagttcg gacgtgcggc aaacggtctg aaattcattt ttcccgaatt ggacaaagcc
      661 aaactgtttg aactgattga gccgagtcat cacaagctgc ccaagtcttt ggctcccgaa
      721 gcctacgact gcgccttttt gaaagctcaa gccattcatg aaca
//
LOCUS       DBBZXU010000230          726 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.230, whole genome shotgun sequence.
ACCESSION   DBBZXU010000230 DBBZXU010000000
VERSION     DBBZXU010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.230"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(129..>726)
                     /locus_tag="ACJJDE_002141"
     CDS             complement(129..>726)
                     /locus_tag="ACJJDE_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010791153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HGG7541987.1"
                     /translation="LSIGQIVKVKPAGYAAPKTAAVESRPAVPAAVQTPVKPAAQPPV
                     QSAPQPAAPAAENKAVPAPAPQSPAASPSGTRSVGGIVWQRPTQGKVVADFGGNNKGV
                     DIAGNAGQPVLAAADGKVVYAGSGLRGYGNLVIIQHNSSFLTAYGHNQKLLVGEGQQV
                     KRGQQVALMGNTDASRTQLHFEVRQNGKPVNPNSYIAF"
BASE COUNT          159 a          208 c          200 g          159 t
ORIGIN      
        1 ccaaacacag tcaaacaaat ttatatgccc cgtcccttct gaatgatttg aaaacacagc
       61 cgccaaaaac aaaaatgccg tctgaaaacc tttcagacgg catttccaat ttgatttcag
      121 gcagaaagtc agaacgcgat atagctgttc gggttaaccg gtttgccgtt ttgccgcacc
      181 tcgaaatgaa gctgcgttct ggaagcgtcg gtattgccca tcaaagcgac ctgctgcccg
      241 cgtttgacct gctggccttc gccgaccagc aatttttggt tgtgcccgta tgcggtcagg
      301 aaggaagaat tatgctggat gatgaccaga ttgccgtatc ccctcaaacc ggaacctgca
      361 taaaccactt tgccgtcagc cgccgccaaa acgggctgtc ccgcattacc ggcaatatcg
      421 acacccttgt tgttgccgcc gaaatcggca accactttac cttgcgtcgg acgctgccaa
      481 acaatgccgc cgaccgaacg cgtgccggaa ggcgaagcgg caggagattg cggggcgggc
      541 gcgggaaccg ctttattttc cgcagcgggc gcggcaggtt gcggcgcgga ctgcacaggc
      601 ggttgcgcgg cgggtttcac aggggtttgc acggcagccg gtacggcggg cctgctttct
      661 acggctgcgg ttttcggtgc ggcatatcct gccggtttga ctttaacaat ctgaccgatg
      721 ctcaac
//
LOCUS       DBBZXU010000231          709 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.231, whole genome shotgun sequence.
ACCESSION   DBBZXU010000231 DBBZXU010000000
VERSION     DBBZXU010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.231"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..113)
                     /locus_tag="ACJJDE_002142"
     CDS             complement(<1..113)
                     /locus_tag="ACJJDE_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS1595 family transposase"
                     /protein_id="HGG7541988.1"
                     /translation="MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHP"
     gene            complement(233..691)
                     /locus_tag="ACJJDE_002143"
     CDS             complement(233..691)
                     /locus_tag="ACJJDE_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002240254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541989.1"
                     /translation="MPSEHAFGRRFVGGYRSGTSEKGFQAVFGRVVTVENVIRLPEKF
                     GRFSGGLWYWAQQTQVQIRRCAVIVRMPIQPKQTSVFRKWMFDGAKVVRRMEGNLWVF
                     GMVALEKTCFKGQMPSENRFQTAFSVYLKQTGKGSNILQSSYSHKRFIVN"
BASE COUNT          187 a          184 c          126 g          212 t
ORIGIN      
        1 ttgggatgga tacccaaaat atcggcggca gaacgggcgg taacttccag tacaaaaaaa
       61 cggagcagtt ctttctgtac ttttttcttt aatttgcagt gcgttatctt catatttcga
      121 gggtaacata tctgctaatc tagtacagcc cctagtttaa agctttgttt cttaagtccg
      181 cagagtatgc catggttaga ccttcaaagt tgagtattgt actattttgt ttttaattaa
      241 ctataaaacg cttgtgtgaa taggaagact gcagaatatt gctgcctttt cctgtttgct
      301 ttaaataaac agaaaatgcc gtctgaaacc gattttcaga cggcatttgt cccttaaaac
      361 acgttttttc aagcgcgacc ataccaaaca cccacaggtt gccttccatc cttcgtacaa
      421 cctttgctcc atcaaacatc cacttcctaa atactgatgt ctgcttaggt tgaatcggca
      481 ttcgtacgat tacggcacac cgcctaatct gtacctgcgt ctgttgcgcc caataccaaa
      541 ggccacctga aaatctccca aacttttcag gtagccttat cacgttttcg actgttacca
      601 cacgcccaaa gaccgcctga aacccttttt cagacgttcc gctccgatac cccccaacaa
      661 aacgccgccc gaacgcatgt tcagacggca ttttctttgc gtcgattca
//
LOCUS       DBBZXU010000232          685 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.232, whole genome shotgun sequence.
ACCESSION   DBBZXU010000232 DBBZXU010000000
VERSION     DBBZXU010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.232"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..264)
                     /locus_tag="ACJJDE_002144"
     CDS             complement(<1..264)
                     /locus_tag="ACJJDE_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002219737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HGG7541990.1"
                     /translation="MFRILIISFLFLLSAKSFSADLEIKNGKLMYALSEKYNDNGFKA
                     YKVLGEGGGIHTEYNYKFDKSLNLNVLESSTGARSLEKVPVKVT"
     gene            complement(218..508)
                     /locus_tag="ACJJDE_002145"
     CDS             complement(218..508)
                     /locus_tag="ACJJDE_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002256210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541991.1"
                     /translation="MNKNERDFFYISNSDLDKLSESYPDRPLSYVFYCYLKETGLLKN
                     FSMDKCHNFFNRINFNESCFEIKFKDDSFFIIGNGKIDVSDSNNFFSVSFEC"
BASE COUNT          258 a          126 c           83 g          218 t
ORIGIN      
        1 agttacttta acggggactt tttcaagaga gcgtgcgcct gttgaacttt ctaatacatt
       61 caaattcaaa cttttatcaa atttgtaatt atattctgta tgaattcctc ctccctcacc
      121 taaaactttg tatgccttaa atccattatc gttatatttt tccgaaagtg catacatcaa
      181 tttcccattt ttaatttcta aatctgctga aaaagattta gcactcaaaa gaaacagaaa
      241 agaaattatt agaatccgaa acatcaattt ttccattgcc aataatgaaa aatgaatcat
      301 ccttgaattt aatttcaaag caagattcat taaaattaat tctattaaaa aaattatgac
      361 atttatccat tgagaaattt ttcaatagac cagtttcttt caaataacaa taaaacacat
      421 aagaaagagg cctatcagga taagattctg acaatttatc taaatcagaa tttgatatat
      481 agaaaaagtc acgttcattt ttattcatgg tttcaagcct caaatgtcta attaaaagcc
      541 tgattttgac accataactt catgcgctca attcttaaac agaaccgccc cgattaatac
      601 gggtacggaa acgccgagat aaaaataaaa atccatcatt tcaaaacctt tttcagcagg
      661 gaaacaaagt aaacggacgc catca
//
LOCUS       DBBZXU010000233          671 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.233, whole genome shotgun sequence.
ACCESSION   DBBZXU010000233 DBBZXU010000000
VERSION     DBBZXU010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 671)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 671)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..671
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.233"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..373
                     /locus_tag="ACJJDE_002146"
     CDS             <1..373
                     /locus_tag="ACJJDE_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7541992.1"
                     /translation="ITTATLMAMLPELGRLSHKRIASLAGIAPHPRESGETKFKSRCF
                     GGKSAVRKALYMATVAATRFEPLIRDFYQRLPSEGKPYKVAVTACMRKLLTISNARMR
                     DYFAENDTAENDTAENGIRTA"
BASE COUNT          156 a          160 c          197 g          158 t
ORIGIN      
        1 gataacgacg gctacgctga tggcgatgct gcccgaattg gggcggctgt cgcacaaacg
       61 gatagcgagt ttggccggca ttgccccgca cccgagggag agcggggaaa ccaaattcaa
      121 aagccgctgc tttggcggaa agtctgcggt acgtaaggcg ctgtatatgg ctaccgtggc
      181 agcgacacgt tttgaaccgc ttattcggga tttctaccaa cgcctgccgt ccgagggtaa
      241 gccgtataag gttgccgtta cggcatgtat gcgcaaactg ctgacgatat cgaatgcccg
      301 gatgcgtgat tattttgccg aaaacgatac cgccgaaaac gataccgccg aaaacggtat
      361 ccggacggct tgatttgagt tttggtattt ttgcccgacg gggtgaaaaa tacagttgct
      421 acggctcgat gaatcgtcag aaatacccga accgtcattc ccgcgcaggc gggaatctag
      481 accggtcggt gcggaaactt atcgggaaaa aaggtttctc cgtccctgaa tcctggattc
      541 ccactttcgt gggaatgaca gaatgtaggt tcgtgggaat gacgtggtgc aggtttccgt
      601 gcggatgaat tcatcattcc cgcgcaggcg ggaatctagt ctgttcggtt tcagttattt
      661 tcgataaatg c
//
LOCUS       DBBZXU010000234          666 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.234, whole genome shotgun sequence.
ACCESSION   DBBZXU010000234 DBBZXU010000000
VERSION     DBBZXU010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 666)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 666)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..666
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.234"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          194 a          188 c          131 g          153 t
ORIGIN      
        1 gcgggaatcc agaatctcgg actttcagat aatctttgaa tattgccgct gccttaaggt
       61 ctggattccc gcctgcgcgg gaatgacgaa tccatccgta cggaaacctg caccgcgtca
      121 ttcccacgaa cccacatccc gtcattccca cgaaagtggg aatccagaac gtaaaatctc
      181 aagaaaccgt tttatccgat aagtttccgt accgaacaga ctagattccc gcctgcgcgg
      241 gaatgacgat tcataagttt cccgaaattc caacataacc gaaacctgac agtaaccgta
      301 gcaactgaac catcattccc accacttttc gtcattccca cgaaagtggg aatccagaat
      361 ctcggacttt cagataatct ttgaatattg ctgttgttct aaggtctaga ttcccgcctg
      421 cgcgggaatg acgaatccat ccgtacggaa acctgcaccg cgtcattccc acgaacccac
      481 atcccgttat taccacgaaa gcgggaatct aggactcagg gttaagaaaa cctacatccc
      541 gtcattccct caaaaacaga aaaccaaaat cagaaaccta aaatcccgtc attcccacga
      601 aagtgggaat ctaggtctgt cggtgcggaa acttatcggg taaaacggtt tctttagatt
      661 ccacgt
//
LOCUS       DBBZXU010000235          664 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.235, whole genome shotgun sequence.
ACCESSION   DBBZXU010000235 DBBZXU010000000
VERSION     DBBZXU010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..664
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.235"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..165
                     /locus_tag="ACJJDE_002147"
     CDS             <1..165
                     /locus_tag="ACJJDE_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003706679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HGG7541993.1"
                     /translation="TKQVTKGVFDGKGEAKIPSYTWHHHQDTGRMQLISERKHTQTGH
                     IGGEAMDKGK"
     gene            168..566
                     /locus_tag="ACJJDE_002148"
     CDS             168..566
                     /locus_tag="ACJJDE_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541994.1"
                     /translation="MLGLTRNNCDDLGFAILCYERNAADKKEFLDWLYEIVRTVPAES
                     FPRYLIDLIDCLESDDCSINIYNIIGFVPTTGMTKKEKDAVYGITYIRNQEFYDIPIT
                     REKALKALKKHPEIYQKFRHFFPFVELPPL"
BASE COUNT          228 a          106 c          151 g          179 t
ORIGIN      
        1 acaaagcagg taaccaaagg agtgtttgac ggaaaaggag aagctaaaat accgagctat
       61 acttggcatc atcatcagga tacgggacga atgcagttaa tatccgaaag aaagcatacg
      121 caaacagggc atataggtgg tgaagcaatg gataaaggaa aatgattatg ttggggctta
      181 cacggaacaa ttgtgatgat ttgggatttg ctatattgtg ttatgagcgc aatgcagccg
      241 acaaaaaaga attcttggat tggttatatg aaattgtcag gactgtccct gccgaaagtt
      301 ttccaaggta tctgattgat ttaatagatt gtttggaatc agatgattgt tccataaata
      361 tatataatat tattggcttt gttccaacta ccggtatgac gaaaaaggaa aaagatgccg
      421 tatatggcat tacctatata cggaatcaag agttttacga tattccgatt actagggaga
      481 aggcgttaaa agccttaaaa aaacatcctg aaatttatca gaagtttcgg catttctttc
      541 cgtttgtaga actgcccccg ctttaaacag tcaaaatgcc gtctgaaacg atattcggct
      601 ttcagacggc atttttgaca caaagcaggt aaccaaaaga gcgtttgacg gcaaaggaag
      661 ataa
//
LOCUS       DBBZXU010000236          642 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.236, whole genome shotgun sequence.
ACCESSION   DBBZXU010000236 DBBZXU010000000
VERSION     DBBZXU010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..642
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.236"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..513)
                     /locus_tag="ACJJDE_002149"
     CDS             complement(<1..513)
                     /locus_tag="ACJJDE_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002234058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HGG7541995.1"
                     /translation="MLKQTTLLAACASFAALLGGCATQQPAPVIAGNSGMQDAPSSAV
                     YNNPYGATPYSPAPASDAPYVPPVQSAPVYTPPAYVPPSAPAVSGTYIPSYAPVDINA
                     ATHTIVRGDTVYNISKRYHISQDDFRAWNGMTDNTLSIGQIVKVKPAGYAAPKAAAVK
                     SRPAVPAAAQP"
BASE COUNT          153 a          159 c          194 g          136 t
ORIGIN      
        1 cggttgcgcg gcagccggta cggcgggcct gctttttacg gctgcggctt tcggtgcggc
       61 atatcctgcc ggtttgactt taacaatctg accgatgctc aacgtattgt cggtcatgcc
      121 gttccacgca cggaaatcgt cttgagagat atggtagcgt ttggaaatgt tgtacaccgt
      181 gtcgccgcgc acaatagtat gcgtcgccgc gttgatgtcg acgggtgcgt aagaaggaat
      241 gtatgtaccc gaaacggcag gtgcagacgg cggaacataa gcaggaggcg tataaaccgg
      301 cgcgctttgc accggcggca cataaggcgc atcgctggca ggagccgggc tgtacggcgt
      361 tgctccatag gggttgttgt aaactgccga agacggcgcg tcctgcatac ctgaattgcc
      421 tgcaatgacg ggggcaggct gctgggtagc acaaccgccc aacagtgcgg caaaggaggc
      481 gcaagccgcc aaaagtgtcg tttgtttcaa cataagataa ccttcatgtt ccgatatata
      541 gcctgaatgc ggtatatcat aataaaaatg cgcgttcttc tcaagcgcaa agcccgacgg
      601 tatagtggat taacaaaaat caggacaagg cgacgaagcc gc
//
LOCUS       DBBZXU010000237          640 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.237, whole genome shotgun sequence.
ACCESSION   DBBZXU010000237 DBBZXU010000000
VERSION     DBBZXU010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..640
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.237"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(160..579)
                     /locus_tag="ACJJDE_002150"
                     /pseudo
     CDS             complement(160..579)
                     /locus_tag="ACJJDE_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010981065.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="pilin"
BASE COUNT          120 a          148 c          189 g          183 t
ORIGIN      
        1 tcggaaaaaa cagaaaccgc tccgccgtca ttcccgcgca ggcgggaatc cagccttgtc
       61 ggtgcagaaa cttatcggga aagcggtttc tttagatttt gcgttctgga ttcccacttt
      121 cgtgggaatg acgggatgtg ggttcgtggg aatgacggtt taggtatttt tatagaaagc
      181 cgtaggtggt gtttctatgc aaacggcaga tgctgcgtcg cggcaggttg acggcaggtg
      241 cttggtgtcg atctgcttgt cgctggcggc ggtgacttcg tcgttgttgg tggtggtgcc
      301 ggtgcgctga accggctgtc cgcagaacca ttttaccgaa ccgtcttgac gcttggccca
      361 cagggagagt tttttgcctt tgatttcgtt gtttacgccg cttgatttca tttcggcggt
      421 aatgacgccg tttgcgactt caactttctc aacatatttt cctttgattt ttgaggaggt
      481 tgccacgccg gcagaactgt tgtcgccggg ccatatgccg tgattcaggt aatactcggt
      541 aacggctgat ttttgacctt cagccaaaag aatggcttcg tcattcccgc gcaggcggga
      601 atccagcctc gtcggtacgg aaacttatcg ggaaaacggt
//
LOCUS       DBBZXU010000238          634 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.238, whole genome shotgun sequence.
ACCESSION   DBBZXU010000238 DBBZXU010000000
VERSION     DBBZXU010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..634
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.238"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          155 a          147 c          181 g          151 t
ORIGIN      
        1 ccgtcattcc cgcgcaggcg ggaatctaga cattcaatgc taaggcaatt tatcggaaat
       61 gactgaaact caagaaactg gattcccact ttcgtgggaa tgacgggatg caggttcgtg
      121 ggaatgacgt ggtgcaggtt cgtaggaatg acgtggtgca ggtttccgtg cggatggatt
      181 cgtcattccc gcgcaggcgg gaatccagac attcaatgct aaggcaattt atcgggaatg
      241 actgaaactc aaaaaactgg attcccactt tcgtgggaat gacgcggtgc aggtttccgt
      301 acggatggat tcgtcattcc cgcgcaggcg ggaatctagg atgcggaatc tcaagaaacc
      361 gttttgcccg ataagtttct gcaccgacag gtctggattc ccgcctgcgc gggaatgacg
      421 attcgggtat ttctgacggt tcgggcattc ccgacaaggt ggattttcaa ggtgttgtat
      481 agggtgtagg aggattcgta aaaggtgagt tatagggtgg gcttcagccc accgattcca
      541 acgattccac caatcctaca ccgttcccat agactcaaat caacacagaa acttatgcgc
      601 cgtcattccc gcgcaggcgg gaatctagga tgcg
//
LOCUS       DBBZXU010000239          621 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.239, whole genome shotgun sequence.
ACCESSION   DBBZXU010000239 DBBZXU010000000
VERSION     DBBZXU010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 621)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 621)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..621
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.239"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          148 a          142 c          168 g          163 t
ORIGIN      
        1 aaatttaaat caggacaaag cgacgaagcc gcagacagta caaatagtac ggaaccgatt
       61 cacttggtgc ttcagcacct tagagaatcg ttctctttga gctagggcga accaacgctg
      121 tactggttta gatttaattc actatacctg cgtaatggta tcgggtactc atcatcaacc
      181 tgccttgcat tcggttgtgt tgtccggcaa ctgtccggtt gtgtcgatgg gttgccctgc
      241 cgctccctgt gctgcgcaac ggttgtgtgc cttgggtggg cgcgagtggc ggccgggcgg
      301 tttgttgcta tgatacggga gttccgatat acaagggtgg gcttcagccc accaatcaac
      361 gaccgaaaaa gaaaaaacgg tgggctgaag cccactctac gcaattacgc aactgttatc
      421 gtggggatga cgggatttta ggtttttgtt tttctgtttt tgcgggaaag atgggtttta
      481 ggttgcggtc atttatcgga aaagcagaaa tcgctccgcc gtcattcccg cgaaagcggg
      541 aatctgaaca cgtccgtagg gaaacctata tcccgtcatt cccacgaaag tgggaatcta
      601 gaacctctga attttcagac a
//
LOCUS       DBBZXU010000240          618 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.240, whole genome shotgun sequence.
ACCESSION   DBBZXU010000240 DBBZXU010000000
VERSION     DBBZXU010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..618
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.240"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..341
                     /locus_tag="ACJJDE_002151"
                     /pseudo
     CDS             1..341
                     /locus_tag="ACJJDE_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            416..>618
                     /locus_tag="ACJJDE_002152"
     CDS             416..>618
                     /locus_tag="ACJJDE_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003696591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family metal-binding protein"
                     /protein_id="HGG7541996.1"
                     /translation="MGRKQPKTCVGVSAVGRERNFAKVSSYAGCCRPLHLRQILPPTA
                     EALMRSRYSAYVLHLIDYSGLTKT"
BASE COUNT          157 a          156 c          175 g          130 t
ORIGIN      
        1 ttgttagaag ggttacccga aggtacgacc gtctatgccg acaaaggcta tgacagtgcg
       61 gaaaaccggc aacatctgga agaacatcag ttaccggacg gcattatgcg caaagcctgc
      121 cgcaaccgtc cgctgtcgga aacgcaaacc aaacgcaacc ggtatttatc gaagacccgt
      181 tatgtggtcg aacaaagctt cggtacgctg caccgtaaat tccgctacgc tcgggcagcc
      241 tatttcggac tgattaagtg agtgcgcaaa gccatctgaa ggcgatgtgt ttgaacctgt
      301 tgaaagccgc caacaggcta agtgcgcctg ttgccgccta aaaggcagca cggatgcctg
      361 attatcgggt atccggggag gattaagggg gcgtttgggt agaattagga gatatttggg
      421 gcgaaaacag ccgaaaacct gtgttggggt ttcggctgtc gggagggaaa ggaattttgc
      481 aaaggtctca agctatgccg gctgctgccg cccacttcat ctgcgccaaa tcctgccgcc
      541 caccgccgaa gccctcatgc gttcgcggta cagcgcgtat gtgctgcacc ttatcgacta
      601 tagtggatta acaaaaac
//
LOCUS       DBBZXU010000241          606 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.241, whole genome shotgun sequence.
ACCESSION   DBBZXU010000241 DBBZXU010000000
VERSION     DBBZXU010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.241"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..300
                     /locus_tag="ACJJDE_002153"
     CDS             <1..300
                     /locus_tag="ACJJDE_002153"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7541997.1"
                     /translation="AVFGAKTAENLCLGFGCREGKEFCKGLKQKQKPKVPSFPRRRES
                     RPPTRQESIGNNRNRTNLDSRFRGNDGRVVSVAPDKCRHLKSRHSLKNRKPKSET"
BASE COUNT          180 a          137 c          143 g          146 t
ORIGIN      
        1 gcggtatttg gggcgaaaac agctgaaaac ctgtgtttgg gtttcggctg tcgggaggga
       61 aaggaatttt gtaaaggtct caaacaaaaa cagaaaccta aagtcccgtc attcccgcgc
      121 aggcgggaat ccagaccccc aacgcggcag gaatctatcg gaaataaccg aaaccggacg
      181 aacctagatt cccgctttcg cgggaatgac ggcagggtgg tttcagttgc tcccgataaa
      241 tgccgccatc tcaagtctcg tcattccctc aaaaacagaa aaccaaaatc agaaacctaa
      301 aatccgtcat tcccgcgcag gcgggaatct aggtttgtcg gcacagaaac ttgtcgggaa
      361 aaacggtttc tttagatttt acgttctgga ttcccgcctg cgcgggaatg acgatgaaaa
      421 gattgttgtc gcttcggata aatttttacc gtgttgggtt ctagattccc gcctgagcgg
      481 gaatgacggc ggcgggtttc tgtttttccg ataaatacac acaaactaaa atttcgtcat
      541 tcccataaaa aacagaaaac caagtgagaa taacaattcg ttgtaaacaa ataactattt
      601 gttaat
//
LOCUS       DBBZXU010000242          593 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.242, whole genome shotgun sequence.
ACCESSION   DBBZXU010000242 DBBZXU010000000
VERSION     DBBZXU010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 593)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 593)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..593
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.242"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>593
                     /locus_tag="ACJJDE_002154"
     CDS             <1..>593
                     /locus_tag="ACJJDE_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002233580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemagglutinin"
                     /protein_id="HGG7541998.1"
                     /translation="AAIGYATGGSGGAVVGANVDWNNRQLHPSEYKLAEQYADIVASR
                     LNISKEEALGRIIRHMQRTVDYATAKADNFRTDDAIISILGANNLPKQDQHYTNPNYN
                     KQYIQNYVRDFNLANKYNYFGKTPTQSRDYKVGVVTDIGKAALNSGIGIFESAANLAT
                     GEIDPNSWAYVHMGRIGYTHPEYGNAWIRISSATLVY"
BASE COUNT          194 a          101 c          135 g          163 t
ORIGIN      
        1 gcggccatcg gctatgcaac tggtggtagt ggtggtgctg tggtgggtgc gaatgtagat
       61 tggaacaata ggcagctgca tccgagtgaa tataaattag cagaacaata tgcagatata
      121 gtggcttctc gtctaaacat ttcaaaagaa gaagcacttg ggcgaattat tcggcatatg
      181 caacgaaccg tagattacgc aacggctaaa gcggataatt tccgtactga tgacgccatt
      241 atttcaattt taggagcaaa caatttaccc aagcaagatc aacattacac taatccgaac
      301 tacaacaaac aatacattca aaattatgtt cgtgatttca atttagccaa taaatacaat
      361 tattttggga aaactcctac tcaatcaagg gattataaag ttggagttgt tacagatatt
      421 ggtaaggctg cattaaatag cggtataggt atatttgaat cggctgcgaa tttagcgaca
      481 ggggagatag atccgaactc atgggcttat gtacacatgg ggcgtatagg ttatacacat
      541 cctgaatatg gaaatgcttg gattcggatt tcaagtgcaa cactagtgta tta
//
LOCUS       DBBZXU010000243          578 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.243, whole genome shotgun sequence.
ACCESSION   DBBZXU010000243 DBBZXU010000000
VERSION     DBBZXU010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 578)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 578)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..578
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.243"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(131..424)
                     /locus_tag="ACJJDE_002155"
     CDS             complement(131..424)
                     /locus_tag="ACJJDE_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002245490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated frpA domain protein"
                     /protein_id="HGG7541999.1"
                     /translation="MNIDDFTPSKIANFFADPDTYSNVLEEVSRFIYSLVPDDANPWK
                     GGEDYIGRGISEWGELLEKWYKQDFLPYLEKNGTNFRNLKIGCLNSLNGQESG"
BASE COUNT          165 a          127 c          100 g          186 t
ORIGIN      
        1 ccttggctgc ggtggtcgaa caatgcacct gcaaagcctt tggcggcgac agtttctatg
       61 ccgtcaccgt ccaaatctag ggcaaggggg tcgtaaacgt tatatttgcc tgaacgtttg
      121 agagctaatt tcaaccactc tcttgcccat tcagggaatt caggcagcca atcttcaaat
      181 ttcggaaatt ggtcccattc ttttcaagat aagggagaaa atcttgttta taccattttt
      241 ccagtaactc tccccattca cttatccctc gtccaatata atcttcgccc cctttccaag
      301 ggtttgcatc atcaggaact aaggaatata taaacctaga tacttcttct aatacattgc
      361 tgtatgtatc aggatccgca aaaaagtttg ctatcttact tggtgtaaaa tcatctatat
      421 tcattataga ttcgccaagc ctctcgtttc cataatcctt atttaattca attcatgctg
      481 taaaacagta gaggatttta gcatttttct cgtatatctc gagatacatt tcttaaattt
      541 aaaaaaatgt tatcgaggga tgcaagtaaa gaagcagt
//
LOCUS       DBBZXU010000244          554 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.244, whole genome shotgun sequence.
ACCESSION   DBBZXU010000244 DBBZXU010000000
VERSION     DBBZXU010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..554
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.244"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          161 a          137 c          127 g          129 t
ORIGIN      
        1 tgaatgtcta gattcccgcc tgcgcgggaa tgacgaatct atccgtacgg aaacctgcac
       61 cgcgtcattc ccacgaaaga gggaatccaa acttgtccgc acggaaactt atcggataaa
      121 acggtttctt agattccatg ttctagattc ccgcctgcgc gggaatgacg gattttaggt
      181 tgggggcatt tattgggaaa agcagaaacc gctccgccgt cattcccacg aaagtgggaa
      241 tctagaaatt taatgttgcg gcactagcca aaaaaaccga aaccgaacgg actagattct
      301 cgcctgcgcg ggaatgacga atccatccgt acggaaacct gcaccacgtc attcccacga
      361 aagtgggaat ccagtttttt gagtttcagt cattcccgat aaattgcctt agcattgaat
      421 gtctagattc ccgcctgcgc gggaatgacg actcataaat tacccgaaac aaccaaaaat
      481 aaccgaaatc aaaaaccggc ttccctgcgt gggaatgaaa tggatttttc tttgagttgc
      541 cgatgcgata aaac
//
LOCUS       DBBZXU010000245          550 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.245, whole genome shotgun sequence.
ACCESSION   DBBZXU010000245 DBBZXU010000000
VERSION     DBBZXU010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 550)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 550)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..550
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.245"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..373
                     /locus_tag="ACJJDE_002156"
     CDS             <1..373
                     /locus_tag="ACJJDE_002156"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002250655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HGG7542000.1"
                     /translation="LAARDIIRFPGFVNNVSEVIKEHHIFVLPSYYREGVPRSTQEAM
                     AVGRAVITTDVPGYRETVADKVNGFLIEPWNPRILAEKMIYFIENREAVRLMGNASYA
                     IAKDKFDAEKVDLKLLDILKA"
BASE COUNT          137 a          133 c          137 g          143 t
ORIGIN      
        1 gcttgccgcc cgcgatatta tccgtttccc cggttttgtg aacaatgttt ccgaagtgat
       61 aaaagaacat catatattcg tattgccgtc ttattatagg gaaggcgttc cccgaagcac
      121 tcaggaggca atggccgtcg gcagggcagt gattacgacg gatgtccccg gatacaggga
      181 aacggtcgcc gacaaggtca acggcttcct gatcgaacct tggaatcccc gcatcttggc
      241 cgaaaaaatg atttatttta tcgaaaacag ggaagccgtc cgcctgatgg ggaatgcaag
      301 ttatgcgatt gccaaagata aattcgatgc cgaaaaagtc gatttgaaat tgctcgatat
      361 tttgaaggcg taaacaaggc tgcccgcttt tgagtttcgg tcatttctga taaacccccg
      421 tcattcccgc cacacccccg tcattcccgc gaaagcggga atccaggttc gttgagtttc
      481 ggtcatttcc gataaattct tgcaactttg agtttctaga ttcccacttt cgtgggaatg
      541 acggcggagg
//
LOCUS       DBBZXU010000246          547 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.246, whole genome shotgun sequence.
ACCESSION   DBBZXU010000246 DBBZXU010000000
VERSION     DBBZXU010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 547)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 547)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..547
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.246"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(466..>547)
                     /locus_tag="ACJJDE_002157"
     CDS             complement(466..>547)
                     /locus_tag="ACJJDE_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7542001.1"
                     /translation="IGRDKLFIHPRLMELLRGEGNSFTSF"
BASE COUNT          152 a           99 c          122 g          174 t
ORIGIN      
        1 atataggttt ccatgcggac gcgttcggat tcacgactgc gcggaaatga cgggattttg
       61 gtgtattccc taaaaaaata aaaaaacatt tgcaactttg ttaaaaataa aggctgtgtt
      121 ttaacgatgt gttgatattt aattttagaa aggtagctat ttaatagtta ccttttctta
      181 tttaaaaata gctttctcaa attccatgaa cgcctcaata cgatatgcag atgctctatc
      241 gaaattaagg ttcaacattt tgtttattaa acattttatt ttagccattt tcaatatacc
      301 cccaaatata cccccaattt gcacaagtca aaattttagg caggggtttt gttgctccca
      361 tgatacgcgg gcggatgccg gcttttcgcg ggggaaatac aaggggtctc ggttcgggtg
      421 tcaaaatccc tgtttcgtgt tagtcatgtg ggggggaaga gggggttaga atgaagtaaa
      481 gctgttgccc tctccccgca atagttccat taggcgcgga tgaatgaata gtttgtccct
      541 gccgatg
//
LOCUS       DBBZXU010000247          542 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.247, whole genome shotgun sequence.
ACCESSION   DBBZXU010000247 DBBZXU010000000
VERSION     DBBZXU010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 542)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 542)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.247"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>542
                     /locus_tag="ACJJDE_002158"
     CDS             <1..>542
                     /locus_tag="ACJJDE_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-Tu/IF-2/RF-3 family GTPase"
                     /protein_id="HGG7542002.1"
                     /translation="IVFMNKCDMVDDAELLELVEMEIRDLLSSYDFPGDDCPIVQGSA
                     LKALEGDAAYEEKIFELAAALDSYIPTPERAVDKPFLLPIEDVFSISGRGTVVTGRVE
                     RGIIHVGDEIEIVGLKETQKTTCTGVEMFRKLLDEGQAGDNVGVLLRGTKREDVERGQ
                     VLAKPGTITPHTKFKAEVYVL"
BASE COUNT          144 a          135 c          144 g          119 t
ORIGIN      
        1 atcgtgttca tgaacaaatg cgacatggtc gacgatgccg agctgttgga actggttgaa
       61 atggaaatcc gcgacctgct gtccagctac gacttccccg gcgacgactg cccgattgta
      121 caaggttctg cactgaaagc cttggaaggc gatgccgctt atgaagagaa aatcttcgaa
      181 ctggctgccg cattggacag ctacatcccg actcccgagc gtgccgtgga caaaccgttc
      241 ctgctgccta tcgaagacgt attctctatt tccggtcgtg gtacagtagt aaccggtcgt
      301 gtagagcgcg gtatcatcca cgttggtgac gagatcgaaa tcgtaggtct gaaagaaact
      361 caaaaaacca cttgtaccgg tgttgaaatg ttccgcaaac tgctggacga aggtcaagca
      421 ggcgacaacg taggcgtatt gctgcgcggt accaaacgtg aagacgtaga gcgtggtcaa
      481 gtattggcta aaccgggtac aatcactcct cacaccaagt tcaaagcaga agtatacgta
      541 ct
//
LOCUS       DBBZXU010000248          496 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.248, whole genome shotgun sequence.
ACCESSION   DBBZXU010000248 DBBZXU010000000
VERSION     DBBZXU010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..496
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.248"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>496
                     /locus_tag="ACJJDE_002159"
     CDS             <1..>496
                     /locus_tag="ACJJDE_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HGG7542003.1"
                     /translation="DDTLSELLELINCQLTEKGLKVEKASAAVIDATIIQTAGSEQRQ
                     AIEVDEEGQVSGQTTLSKDKNARWTKKNSLYKLGYKQHTRTDAEGYIEKLYITPTNAH
                     ECTHLSPLLEGLPKGTTVYADKGYDSKENRQHLKEHRLQNGIMRKACRNRPLTETQTK
                     RNRY"
BASE COUNT          166 a          138 c          114 g           78 t
ORIGIN      
        1 aagacgacac cctgtccgaa ctgttggaac tgattaactg ccaactgacc gaaaaaggct
       61 taaaagtaga gaaagcatcc gccgccgtca ttgacgccac cattattcag accgccggca
      121 gcgaacagcg tcaggccata gaagtcgatg aagagggaca agtcagcggt caaaccacac
      181 tgagtaagga caaaaatgcc cgttggacaa agaaaaacag cctctacaaa ctcggttaca
      241 aacaacatac ccgtaccgat gcggaaggct atatcgagaa actgtacatc actcccacca
      301 atgcccatga gtgcacacac ctgtcgccgt tgttggaagg actgcccaaa ggtacgaccg
      361 tctatgccga caaaggctac gacagcaagg aaaaccggca acatctgaaa gaacatcggt
      421 tgcagaacgg cattatgcgc aaagcctgcc gcaaccgtcc gctgacggaa acgcaaacca
      481 aacgtaaccg atattt
//
LOCUS       DBBZXU010000249          484 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.249, whole genome shotgun sequence.
ACCESSION   DBBZXU010000249 DBBZXU010000000
VERSION     DBBZXU010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..484
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.249"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..204)
                     /locus_tag="ACJJDE_002160"
     CDS             complement(<1..204)
                     /locus_tag="ACJJDE_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002247116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542004.1"
                     /translation="MRLSLYGCFYFTFSFVWEWFEEAGGYRFLLVVLKIVSFSADFRH
                     FFIGVGYLYWHGASGVLIGSEFEI"
     gene            349..>484
                     /gene="pilE"
                     /locus_tag="ACJJDE_002161"
     CDS             349..>484
                     /gene="pilE"
                     /locus_tag="ACJJDE_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial major subunit PilE"
                     /protein_id="HGG7542005.1"
                     /translation="MNTLQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAI
                     L"
BASE COUNT          170 a          127 c           71 g          116 t
ORIGIN      
        1 aatctcaaat tccgacccaa tcaacacacc cgatgcccca tgccaataga gataccccac
       61 gccaataaaa aagtgccgaa aatcggcact aaaactgaca attttcaaca ctactaacaa
      121 aaaacggtaa ccccctgctt cctcaaacca ctcccaaacg aaagaaaatg taaaataaaa
      181 acaaccatat aaagataaac gcataaattt tcacctcaaa acacaaactt gataccaatc
      241 ttgctttata atgcacaggt atcgtaacaa aataccgatg gtcaaataca ttgcataatg
      301 ccgatggcgt aagcttgagg catttccttt ccaattagga gtaattttat gaacaccctt
      361 caaaaaggtt ttacccttat cgagctgatg attgtgattg ccatagtcgg cattttggcg
      421 gcagtcgccc ttcctgctta tcaagactac acagcccgcg cacaagtttc cgaggccatt
      481 cttt
//
LOCUS       DBBZXU010000250          468 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.250, whole genome shotgun sequence.
ACCESSION   DBBZXU010000250 DBBZXU010000000
VERSION     DBBZXU010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..468
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.250"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>468
                     /locus_tag="ACJJDE_002162"
     CDS             <1..>468
                     /locus_tag="ACJJDE_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002242970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7542006.1"
                     /translation="AIIALAVTVVTAGAGVGAALGLNGAAAAAADAAFASLASQASVS
                     LINNKGDVGKTLKELGRSRTVKNLVVAAATAGVSNKLGASSLATWSETPWVNNLNVNL
                     ANAGSAALINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIAHKV"
BASE COUNT          114 a          132 c          134 g           88 t
ORIGIN      
        1 agcgattatc gcgctggctg ttaccgtggt tactgcgggc gcgggagtcg gagccgcact
       61 aggcttaaac ggcgcagccg cagcagcggc cgatgccgcc tttgcctcac tcgcttctca
      121 ggcttccgta tcgctcatca acaataaagg cgatgtcggc aaaaccctga aggaactggg
      181 cagaagccgc acggtaaaaa atctggttgt agcggcggca acggcaggcg tatccaacaa
      241 actcggtgcc tcttcccttg ccacttggag cgaaacccct tgggtaaaca acctcaacgt
      301 taacctggcc aatgcgggca gtgccgcgct gatcaacacc gctgttaacg gcggcagcct
      361 gaaagacaat ctggaggcaa atatcctggc ggcattggtg aataccgcgc atggggaggc
      421 tgcgagtaag attaagcaat tggatcagca ctatatcgcc cacaaagt
//
LOCUS       DBBZXU010000251          450 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.251, whole genome shotgun sequence.
ACCESSION   DBBZXU010000251 DBBZXU010000000
VERSION     DBBZXU010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 450)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 450)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..450
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.251"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(41..280)
                     /locus_tag="ACJJDE_002163"
     CDS             complement(41..280)
                     /locus_tag="ACJJDE_002163"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542007.1"
                     /translation="MLPTRKTARKIQARHIALPFSGKPQFYRPQERLSKQAQATPPGH
                     FRFHRLSVVRIMQQHHQRITLFGRQQAETFAKIVC"
     gene            340..>450
                     /locus_tag="ACJJDE_002164"
     CDS             340..>450
                     /locus_tag="ACJJDE_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002229653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HGG7542008.1"
                     /translation="MKKPTDTLPVNLQRRRLLCAAGALLLSPLAHAGAQRE"
BASE COUNT           89 a          115 c          129 g          117 t
ORIGIN      
        1 attgaaaatt ttttggcgca tttttatgcg tcaaatttcg ttaacagact atttttgcaa
       61 aggtctccgc ctgctgccgc ccgaaaagcg tgatgcgctg atggtgctgc tgcataatcc
      121 ggacgacgga taaccggtga aaacggaaat gcccgggcgg tgttgcctgt gcctgtttgg
      181 acaagcgttc ttgagggcgg tagaattgag gtttgcccga aaagggcagg gcgatatgcc
      241 gcgcttggat tttgcgcgcg gtttttcgcg ttggaagcaa tcattgtctg tttgaatatt
      301 taatgccgtc tgaaacgtcc ggacgcgccc ccgttcccta tgaaaaaacc gaccgatacc
      361 ctacccgtta atctgcaacg ccgccgcctg ttgtgtgccg ccggtgcgtt gttgctcagt
      421 cctctggcgc acgccggcgc gcaacgtgag
//
LOCUS       DBBZXU010000252          446 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.252, whole genome shotgun sequence.
ACCESSION   DBBZXU010000252 DBBZXU010000000
VERSION     DBBZXU010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 446)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 446)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..446
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.252"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>446
                     /locus_tag="ACJJDE_002165"
     CDS             <1..>446
                     /locus_tag="ACJJDE_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015815989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pilus assembly/adherence protein PilC"
                     /protein_id="HGG7542009.1"
                     /translation="KYKDNGCGAETAILGINTADGGKLTKKSARPIVPDTNTAVAQYS
                     GHKKGTNGKSIPIGCMQKGNEIVCPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGS
                     GIDPDGKRAGKNNRCFSQKGVRTLLMNDLDSLDITGPTCGMKRISW"
BASE COUNT          131 a          119 c          122 g           74 t
ORIGIN      
        1 caaatataaa gacaacggct gcggcgcgga aaccgccatt ttgggcatca ataccgccga
       61 cggcggcaag ctgaccaaga aaagcgcgcg cccgattgtg ccggacacca atacggctgt
      121 cgcgcaatat tccggccata agaaaggcac caacggcaaa tccatcccta taggttgtat
      181 gcaaaaaggc aatgaaatcg tctgcccgaa cggatatgtt tacgacaaac cggttaatgt
      241 gcgttatctg gatgaaaaga aaacagacgg attttcaaca acggcagacg gcgatgcggg
      301 cggcagcggt atagaccccg acggcaagcg tgccggcaaa aacaaccgct gcttctccca
      361 aaaaggggtg cgcaccctgc tgatgaacga tttggacagc ttggacatta ccggcccgac
      421 gtgcggtatg aaacgaatca gctggc
//
LOCUS       DBBZXU010000253          440 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.253, whole genome shotgun sequence.
ACCESSION   DBBZXU010000253 DBBZXU010000000
VERSION     DBBZXU010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 440)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 440)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..440
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.253"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(198..>440)
                     /locus_tag="ACJJDE_002166"
     CDS             complement(198..>440)
                     /locus_tag="ACJJDE_002166"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542010.1"
                     /translation="WFKFNPLYKSMWFDNGKLVFISFTNQQMENQSRPSLAMFISDDK
                     ISSTDIDEFLASFDPDKYRIFHDPRYKFLPSMSNSL"
BASE COUNT          157 a           63 c           63 g          157 t
ORIGIN      
        1 gctgtactgg tttaaattta atccactata ttttgtaata gctgccatta tgcctactag
       61 gatatatacc ttctatataa tccttattta aataaaaacc cttataaaaa tctgtgttat
      121 ctgtcgggat tgaaaaaaag attttatctt tctcatcagg tttatatttg ctatcaatat
      181 caaaaagaga ataaggatta caatgagttc gacatactag gtaaaaattt atatcttgga
      241 tcatgaaata ttcgatattt atcaggatcg aaagatgcta aaaattcatc aatatcggta
      301 ctggatattt tgtcatcact aataaacatc gctagagatg ggcgactttg attttccatt
      361 tgttgattag taaaggatat aaatactaac ttgccattgt caaaccacat agatttatat
      421 agtggattaa atttaaacca
//
LOCUS       DBBZXU010000254          438 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.254, whole genome shotgun sequence.
ACCESSION   DBBZXU010000254 DBBZXU010000000
VERSION     DBBZXU010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 438)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 438)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..438
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.254"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(121..>438)
                     /locus_tag="ACJJDE_002167"
     CDS             complement(121..>438)
                     /locus_tag="ACJJDE_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-binding protein"
                     /protein_id="HGG7542011.1"
                     /translation="DTMHFKGFKAADVHFIRSGSDLVLSASEQDNVRISGFFYGENHR
                     VDTFVFDDAAISNPDFAKYINAGNNLVQSMSVFGSNTAATGGNVDANTQSVQQPLLVT
                     PSA"
BASE COUNT          145 a           90 c           80 g          123 t
ORIGIN      
        1 agaagtgcac cgattaaggt taattaaaat acgaccctta tcccaatatt aagaaaaaca
       61 gcaatcaaaa taaacttgat tgctgttttt cagtttaagc catgaatgtg attaggctcc
      121 ttatgcagat ggcgttacca ataacggctg ctgtacggat tgtgtattgg catccacatt
      181 tcctcctgtc gcagcagtat tagaaccgaa cacagacata gactgtacca aattattgcc
      241 agcattaata tacttggcaa aatctggatt actgatagct gcatcatcaa agacaaatgt
      301 atctacacga tggttttcac catagaagaa tccggaaata cgtacgttgt cttgttcaga
      361 agcgctaagc accaaatcac ttccggaacg gataaaatga acatctgctg ctttaaatcc
      421 tttaaagtgc atagtgtc
//
LOCUS       DBBZXU010000255          419 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.255, whole genome shotgun sequence.
ACCESSION   DBBZXU010000255 DBBZXU010000000
VERSION     DBBZXU010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.255"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>419
                     /locus_tag="ACJJDE_002168"
     CDS             <1..>419
                     /locus_tag="ACJJDE_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002227047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fic family protein"
                     /protein_id="HGG7542012.1"
                     /translation="MDTERQDPATKEALQYRTALFAGYESLTSRPLCTQTAIMVCNAI
                     KHPYEMAIRKTGGTALKGGNSGNVVYTPPEGEETIRGKLANWERFIHESGDLDPLIIM
                     AAAHYQFEAIHPFTDGNGRTGRILNSLLLIEKGLLDLP"
BASE COUNT          118 a          119 c          107 g           75 t
ORIGIN      
        1 atggatacgg aacggcaaga ccctgccacg aaagaagccc tgcaataccg caccgccctg
       61 tttgcaggct atgaatcact gacgagccgc cctttatgca cacaaaccgc catcatggtc
      121 tgcaacgcca tcaagcaccc ctacgaaatg gccatccgca aaacaggcgg cacagcccta
      181 aaaggaggca acagcggaaa tgttgtctat accccgcccg aaggagaaga aaccatacgc
      241 ggcaagctgg caaattggga gcggtttatt cacgaaagcg gcgatttaga cccgcttatc
      301 atcatggcgg cggcacatta ccaatttgaa gccatccatc cgtttacgga cggcaacggg
      361 cggacggggc gcatattgaa cagcctgcta ttgattgaaa aagggctttt ggatttgcc
//
LOCUS       DBBZXU010000256          401 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.256, whole genome shotgun sequence.
ACCESSION   DBBZXU010000256 DBBZXU010000000
VERSION     DBBZXU010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.256"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            108..323
                     /gene="rpmE"
                     /locus_tag="ACJJDE_002169"
     CDS             108..323
                     /gene="rpmE"
                     /locus_tag="ACJJDE_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003681847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HGG7542013.1"
                     /translation="MKQGIHPNYHEVNVTCSCGNKFATKSAMEKENFNIEVCSLCHPF
                     YTGTQKIVDTTGRVDKFNNKFGNLFKR"
BASE COUNT          123 a          104 c           74 g          100 t
ORIGIN      
        1 attttatcga atatcctctt gacgaaacaa cagaaaatag cgagaatgcc gagcttgtct
       61 gtagcatagg tacattccct atgcccgctt ttttgaaagg aaatcaaatg aaacaaggta
      121 ttcacccgaa ctaccacgaa gtcaacgtta cctgctcttg cggcaacaaa ttcgcaacca
      181 aatccgcgat ggaaaaagaa aacttcaata tcgaggtttg ctccctgtgc cacccgttct
      241 ataccggcac ccaaaaaatc gtcgatacca ccggccgcgt ggacaaattc aacaacaaat
      301 tcggcaacct gttcaaacgc tgattgccgc tttgcaagaa ttaagccctg ccatcatttc
      361 gatggcaggg ctttttaata tttggcacac tgacttctta t
//
LOCUS       DBBZXU010000257          401 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.257, whole genome shotgun sequence.
ACCESSION   DBBZXU010000257 DBBZXU010000000
VERSION     DBBZXU010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 401)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 401)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..401
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.257"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          118 a          101 c           71 g          111 t
ORIGIN      
        1 cccccccccc cgcaaaaaac catttttcag aacaaatatc tgataaatgc cgcaaccttt
       61 attttaaaaa tgattatatt ttgatataaa acaatagctt attttttcaa aaacgttgtg
      121 tttctacaac acaattcaag cgcagacctc gtgcgagccg atgcgctgct gcccggatgc
      181 agtctcggct ttttaaaacg ccataaaaaa acacacgcgg cactttatag tggattaaca
      241 aaaaccagta cggcgttgcc tcaccttagc tcaaagagaa cgattctcta aggtgctgaa
      301 gcaccaagtg aatcgattcc gtactatctg tactgtctgc ggcttcgccg tcttgtcctg
      361 atttttgtta atccactata aagaccgtcg ggcatctgca g
//
LOCUS       DBBZXU010000258          400 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.258, whole genome shotgun sequence.
ACCESSION   DBBZXU010000258 DBBZXU010000000
VERSION     DBBZXU010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.258"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          119 a          116 c           75 g           90 t
ORIGIN      
        1 gactttcaga taatctttga atattgccgc tgccttaagg tctagattcc cgcctgcgcg
       61 ggaatgacga ttcataagtt tcccgaaatc ccaacataac cgaaacctga cagtaaccgt
      121 agcaactgaa ccgtcattcc caccactttt cgtcattccc gcgaaagcgg gaatctagaa
      181 tctcggactt tcagataatc tttgaatatt gctgttgcct taaggtctag attcccgcct
      241 gcgcgggaat gacgaatcca tccgtacgga aacctgcacc gcgtcattcc cacgaaccca
      301 catcccgtca ttaccacgaa agcgggaatc taggacgcag ggttaagaaa acctacatcc
      361 cgtcattccc tcaaaaacag aaaaccaaaa acagaaacct
//
LOCUS       DBBZXU010000259          392 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.259, whole genome shotgun sequence.
ACCESSION   DBBZXU010000259 DBBZXU010000000
VERSION     DBBZXU010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 392)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 392)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..392
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.259"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>392
                     /locus_tag="ACJJDE_002170"
     CDS             <1..>392
                     /locus_tag="ACJJDE_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-layer family protein"
                     /protein_id="HGG7542014.1"
                     /translation="WDTKLQGTQFETTLGGATIRAGVGEQARADAKIILEGIKSSIHT
                     ETVSSSKSTLWQKQAGRGSNIETLQLPSFTGPVAPVLTAPGGYIVDIPKGNLKTEIEK
                     LSKQPEYAYLKQLQVAKNVNWNQVQLAY"
BASE COUNT          122 a          109 c          100 g           61 t
ORIGIN      
        1 tgggatacca aactgcaagg cacacagttt gaaaccacac tgggtggcgc aaccatacgc
       61 gcaggcgtag gcgagcaggc acgggcagat gccaagatta tcctcgaagg gatcaaaagc
      121 agcatccaca cagaaaccgt gagcagcagc aaatctactc tatggcaaaa acaggcagga
      181 cggggcagta acatcgaaac cttgcaattg ccgagtttca ccggtcccgt tgcgcccgta
      241 ctgaccgctc ccggcggcta tatcgtcgac attccgaaag gcaatctgaa aaccgaaatc
      301 gaaaagctgt ccaaacagcc cgagtatgcc tatctgaaac agctccaagt agcgaaaaac
      361 gtcaactgga accaggtaca gctggcgtac ga
//
LOCUS       DBBZXU010000260          387 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.260, whole genome shotgun sequence.
ACCESSION   DBBZXU010000260 DBBZXU010000000
VERSION     DBBZXU010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 387)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 387)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.260"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..250
                     /locus_tag="ACJJDE_002171"
     CDS             <1..250
                     /locus_tag="ACJJDE_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003689514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Imm41 family immunity protein"
                     /protein_id="HGG7542015.1"
                     /translation="LIEVRRKYPYPMDIPRDIVIGIGSIIEFLMVPNWKLFTIKSSPW
                     LPKSIKINERYERFRVMLRYIFTEKDIVNVRFDYYNKK"
BASE COUNT          124 a           75 c           70 g          118 t
ORIGIN      
        1 tttaatcgag gttaggagaa aatatcctta tccgatggat ataccaaggg atatcgtgat
       61 tggaatcggt agcattattg agtttttaat ggttccaaat tggaaacttt ttacaattaa
      121 atcttcccct tggttgccta aaagtatcaa aattaatgag cgttatgaaa ggttcagagt
      181 aatgctccgt tatattttta ccgagaaaga catagtcaac gtacgatttg attattacaa
      241 caaaaaatag caaaccccgg caatcaaaat gccgtctgaa accgtgttta attttcaggc
      301 gaccttcccc ttatttgaaa caggatattg ggaactaagt tcttcaaaaa tcctacacct
      361 gctccttcca cggcagcacc ttggtca
//
LOCUS       DBBZXU010000261          384 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.261, whole genome shotgun sequence.
ACCESSION   DBBZXU010000261 DBBZXU010000000
VERSION     DBBZXU010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.261"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          102 a          118 c           70 g           94 t
ORIGIN      
        1 accgtcattc ccgccacttt tcgtcattcc cgctcaggcg ggaatctaga atctcggact
       61 ttcagataat ctttgaatat tgctgttgtt ctaaggtctg gattcccgcc tgcgcgggaa
      121 tgacgaatcc atccgcacgg aaacctatat cccgtcattc ctacgaacct acatcccgtc
      181 attccctcaa aaacagaaaa ccaaaattag aaacctaaaa tcccgtcatt cccgcgcagg
      241 cgggaatcca aacttgtccg cacggaaact tatcggataa aacggtttct tagattccac
      301 gttctagatt cccgcctgcg cgggaatgac gaatccatcc gcacggaaac ctatatcccg
      361 tcattcttac gaacctacat cccg
//
LOCUS       DBBZXU010000262          380 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.262, whole genome shotgun sequence.
ACCESSION   DBBZXU010000262 DBBZXU010000000
VERSION     DBBZXU010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 380)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 380)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..380
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.262"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          107 a           87 c           89 g           97 t
ORIGIN      
        1 atttcgggaa acttatgaat cgtcattccc gcgcaggcgg gaatctggaa tttcaatgcc
       61 tcaagaattt atcggaaaaa accaaaaccc ttccgtcatc attcccacga aagtgggaat
      121 ctagaaatga aaagcaacag gaatttatcg gaaatgaccg aaactgaacg gactggattc
      181 ccgcttttgc gggaatgacg gcgacagggt tgctgttata gtggatgaac aaaaaccagt
      241 acgtcgttgc ctcgccttag ctcaaagaga acgattctct aaggtgctga agcaccgagt
      301 gaatcggttc cgtactattt gtactgtctg cggcttcgcc gccttgtcct gatttttgtt
      361 aatccgctat aaagaccgtc
//
LOCUS       DBBZXU010000263          375 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.263, whole genome shotgun sequence.
ACCESSION   DBBZXU010000263 DBBZXU010000000
VERSION     DBBZXU010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 375)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 375)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..375
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.263"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..181
                     /locus_tag="ACJJDE_002172"
     CDS             <1..181
                     /locus_tag="ACJJDE_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IgG-binding virulence factor TspB family
                     protein"
                     /protein_id="HGG7542016.1"
                     /translation="VLAGGGKLARLGAKFSTRAVPYVGTALLAHDVYETFKEDIQARG
                     YQYDPETDKFAKVSG"
BASE COUNT          107 a           77 c          109 g           82 t
ORIGIN      
        1 cgtattggcg gggggcggca aacttgcccg cttaggcgcg aaattcagca caagggcggt
       61 tccctatgtc ggaacagccc ttttagccca tgacgtatac gaaactttca aagaagacat
      121 acaggcacga ggctaccaat acgaccccga aaccgacaaa tttgcaaagg tctcaggcta
      181 agtgcgcctg ttgccgccta aaaggtaacc cggatgcctg attatcgggt atccggggag
      241 gattaagggg gtatttgggt aaaattagga ggtgttatgg agcgaaaaca gccgaaaacc
      301 tgtgtttggg tttcggctgt cgggagggaa aggaattttg caaaggtctc aattagtata
      361 gtggattaac aaaaa
//
LOCUS       DBBZXU010000264          373 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.264, whole genome shotgun sequence.
ACCESSION   DBBZXU010000264 DBBZXU010000000
VERSION     DBBZXU010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 373)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 373)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..373
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.264"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(1..329)
                     /locus_tag="ACJJDE_002173"
                     /pseudo
     CDS             complement(1..329)
                     /locus_tag="ACJJDE_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT           87 a           94 c          100 g           92 t
ORIGIN      
        1 ttcagatggc tttgcgcact cactttaatc agtccgaaat aggctgcccg cgcatagcgg
       61 aatttacggt gcagcgtacc gaagctttgt tcgaccacat aacgggtctt cgacaaatat
      121 cggttacgtt tggtttgcgc ttccgccagc ggacggttgc ggcaggcttt gcgcataata
      181 ccgtctaaca actgacgctc ttccagatgt tgccggtttt ccgcactgtc atagcctttg
      241 tcggcataga cggtcgtacc tttgggcagt ccttccaaca aaggcggcag gtgtttgcac
      301 tcatgggcat tggcggaggt atagtggatt aacaaaaatc aggacaaggc gacgaagccg
      361 cagacagtac aaa
//
LOCUS       DBBZXU010000265          372 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.265, whole genome shotgun sequence.
ACCESSION   DBBZXU010000265 DBBZXU010000000
VERSION     DBBZXU010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.265"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(168..>372)
                     /locus_tag="ACJJDE_002174"
     CDS             complement(168..>372)
                     /locus_tag="ACJJDE_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010980982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542017.1"
                     /translation="IGGQSTAAIADLAGEMRRLAKKSKMLLKGLWPFLSSTISAFKIN
                     QSLFKHYCKTVQLLNCKHRKKNY"
BASE COUNT          112 a           68 c           76 g          116 t
ORIGIN      
        1 agagatgaaa cagcgtatcg gctccctgcc ggttgaattt tccgaaaaaa cgcgacgtaa
       61 ccagcatcaa catatataag aacagcacaa atagcatcaa tacatcaggc aacgaaaatg
      121 cagaataatg cacttaatgg tgtttggata tctgttgttt tgtgctgtta gtaattcttc
      181 tttctgtgtt tacagtttag cagttgtaca gttttacagt aatgtttaaa caatgactga
      241 tttattttaa atgcagatat tgtagaggat aaaaatggcc aaagtccttt cagtaacatt
      301 tttgattttt tagcgagcct tctcatttcc ccggcgagat cggcaatggc agcggtactt
      361 tggccgccga ta
//
LOCUS       DBBZXU010000266          369 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.266, whole genome shotgun sequence.
ACCESSION   DBBZXU010000266 DBBZXU010000000
VERSION     DBBZXU010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..369
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.266"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          113 a           97 c           70 g           89 t
ORIGIN      
        1 agtgggaatc tagaacgtaa aatctcaaga aaccgtttta tccgataagt ttccgtgccg
       61 acagacctag attcccgcct gcgcgggaat gacgggattt gagattgcgg catttatcgg
      121 gagcaacaga atccgctctg ccgtcattcc cacgaaagtg ggaatccagg acacaaaatc
      181 tcaagaaacc gttttgcccg ataagtttcc gcaccgacag acctagattc ccgcctgcgt
      241 gggaatgacg gcggaaagat tctatttttc ccgataatca cccacaatct caaattcctt
      301 cattctctca aaaacaaaat cagaacccta aatcccatca tccccatcta tgtgaatata
      361 aaaatttta
//
LOCUS       DBBZXU010000267          368 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.267, whole genome shotgun sequence.
ACCESSION   DBBZXU010000267 DBBZXU010000000
VERSION     DBBZXU010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 368)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 368)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..368
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.267"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>368
                     /locus_tag="ACJJDE_002175"
     CDS             <1..>368
                     /locus_tag="ACJJDE_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002249609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF637 domain-containing protein"
                     /protein_id="HGG7542018.1"
                     /translation="QVQLAYDRWDYKQEGLTEAGAAIIALAVTVVTSGAGTGAVLGLN
                     GAAAAATDAAFASLASQASVSFINNKGDVGKTLKELGRSSTVKNLVVAAATAGVADKI
                     GASALNNVSDKQWINNLTVNL"
BASE COUNT           94 a          104 c          107 g           63 t
ORIGIN      
        1 caggtgcagc ttgcttacga cagatgggac tacaaacagg agggcttaac cgaagcaggt
       61 gcggcgatta tcgcactggc cgttaccgtg gtcacctcag gcgcaggaac cggagccgta
      121 ttgggattaa acggtgcggc cgccgccgca accgatgcag cattcgcctc tttggccagc
      181 caggcttccg tatcgttcat caacaacaaa ggcgatgtcg gcaaaaccct gaaagagctg
      241 ggcagaagca gcacggtgaa aaatctggtg gttgccgccg ctaccgcagg cgtagccgac
      301 aaaatcggcg cttcggcact gaacaatgtc agcgataagc agtggatcaa caacctgacc
      361 gtcaacct
//
LOCUS       DBBZXU010000268          367 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.268, whole genome shotgun sequence.
ACCESSION   DBBZXU010000268 DBBZXU010000000
VERSION     DBBZXU010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..367
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.268"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            45..215
                     /locus_tag="ACJJDE_002176"
     CDS             45..215
                     /locus_tag="ACJJDE_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubredoxin"
                     /protein_id="HGG7542019.1"
                     /translation="MAQYMCGPCGWIYDEEHGDPEHGIPPGTKFEDIPDDWKCPECGV
                     GKEDFYLLDFVI"
BASE COUNT          107 a           95 c           95 g           70 t
ORIGIN      
        1 actggttttt gttcatccgc tatacaaaaa acaaggaaac acaaatggcg caatatatgt
       61 gcggcccctg cggctggatt tacgatgaag aacacggcga ccccgaacac ggcatccccc
      121 ctgggacaaa gtttgaagac atccccgacg actggaaatg ccccgaatgc ggcgtgggca
      181 aagaagattt ctacctgttg gatttcgtga tatagcggca gccgcaccct tagggaaaac
      241 cccgtcatcc ggcgttccgc ctgcggcggc agggaacgcc gttttatagt ggattaacaa
      301 aaatcaggac aaggcgacga agccgcagac agtacaaata gtacggaacc gattcacttg
      361 ttaaaga
//
LOCUS       DBBZXU010000269          366 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.269, whole genome shotgun sequence.
ACCESSION   DBBZXU010000269 DBBZXU010000000
VERSION     DBBZXU010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.269"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          111 a           78 c           84 g           93 t
ORIGIN      
        1 attctcacga aagtgggaat ccagtttttt gagtttcagt cattttcaat aaattgcctt
       61 agcattgaat gtctagattc ccgcctgcgc gggaatgacg ggatttgagg ttgcggcatt
      121 tatcggaaaa aacagaaaac caaaaacaga aacctaaaat tcgtcattcc cgcgcaggcg
      181 ggaatccaat gcgttgagtt tcagctattt agaataaatt ttgaaactct aatcgcgtca
      241 ttcccacgaa agtgggaatc tagaaattta atgttgcggc actagccaaa aaaaccgaaa
      301 ccgaacggac tagattcccg cctgcgcggg aatgacggct gcagatgccc gacggtcttt
      361 atagtg
//
LOCUS       DBBZXU010000270          364 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.270, whole genome shotgun sequence.
ACCESSION   DBBZXU010000270 DBBZXU010000000
VERSION     DBBZXU010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.270"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            1..215
                     /locus_tag="ACJJDE_002177"
                     /pseudo
     CDS             1..215
                     /locus_tag="ACJJDE_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014581020.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          100 a           85 c          110 g           69 t
ORIGIN      
        1 tacgaccgtc tatgccgaca aaggctacga cagtgcggaa aaccggcaac atctggaaga
       61 acatcagttg caggacggca ttatgcgcaa agcctgccgc aaccgtccgc tgacggaagc
      121 gcaaaccaaa cgcaaccgat atttatcgaa gacccgtggc gatgtgtttg aacctgttga
      181 aagccgccaa caggctaagt gcgcccgctg ccgcccaaaa ggcgaccgga tgcctgatta
      241 tcgggtatcc agggaggatt aagggggtat ttgggtaaaa tcaggaggta tttggggcga
      301 aaacagccga aaacctgtgt ttgggtttcg gctgtcggga gggaaaggaa ttttgcaaag
      361 gtct
//
LOCUS       DBBZXU010000271          362 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.271, whole genome shotgun sequence.
ACCESSION   DBBZXU010000271 DBBZXU010000000
VERSION     DBBZXU010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 362)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 362)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..362
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.271"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..292)
                     /locus_tag="ACJJDE_002178"
     CDS             complement(<1..292)
                     /locus_tag="ACJJDE_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019273676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T cell/B cell stimulating protein TspB"
                     /protein_id="HGG7542020.1"
                     /translation="MFLILGRNFLKIILCFSFFVPKFALASVNVPGKFDRVEVYDDGR
                     YLGIRGSDDKRRRIWKGVFDRESGRYLTSEAQDLKVRHVSTGASSTGKVSSVV"
BASE COUNT          129 a           77 c           38 g          118 t
ORIGIN      
        1 atacaaccga actaacttta cccgtacttg atgctccagt agatacatgc ctaactttta
       61 aatcttgagc ttctgaagtt aaatatcttc ccgattctct atcaaataca cctttccaaa
      121 ttcttcttct tttgtcatct gaacctcgaa tacctaaata tctgccatca tcataaactt
      181 caaccctatc aaatttaccc ggaacattta ctgatgccaa tgcaaattta ggtacaaaaa
      241 aactaaagca taggataatc tttaaaaaat ttcgccctag gataagaaac ataacatttt
      301 gcttcatcta atttaattaa taatgtagaa gaatcaggga attgaatttc tataaaatct
      361 ct
//
LOCUS       DBBZXU010000272          359 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.272, whole genome shotgun sequence.
ACCESSION   DBBZXU010000272 DBBZXU010000000
VERSION     DBBZXU010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 359)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 359)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..359
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.272"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>359
                     /locus_tag="ACJJDE_002179"
     CDS             <1..>359
                     /locus_tag="ACJJDE_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002253928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542021.1"
                     /translation="DSDDLGFAIKCLFSQSIDLNEFKLWIEQVIRDMPIEDIPFYIFD
                     LADFDVGIGDIGNIVGFAPSSSLPKSKKNALTGIAFLRGIDVYDPPVSKEKALKALEK
                     YPEIYQKFQHFFPFVEL"
BASE COUNT          107 a           60 c           73 g          119 t
ORIGIN      
        1 ggatagtgat gatttaggat ttgcaattaa atgcttattc tctcaatcta ttgatttaaa
       61 tgaattcaag ttatggattg aacaagtaat acgagatatg cccattgagg acatcccttt
      121 ttatattttt gacttggcgg atttcgatgt aggaattggc gatattggca atattgtagg
      181 ttttgctccg agttccagcc tgccgaaatc gaaaaaaaat gccttgaccg gcattgcctt
      241 cttaaggggg atagatgtct atgaccctcc cgtttcaaaa gaaaaagcat taaaagcctt
      301 agagaaatat cctgaaattt atcagaaatt tcagcatttc tttccgtttg tagagctgc
//
LOCUS       DBBZXU010000273          352 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.273, whole genome shotgun sequence.
ACCESSION   DBBZXU010000273 DBBZXU010000000
VERSION     DBBZXU010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 352)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 352)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..352
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.273"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          102 a           67 c           87 g           96 t
ORIGIN      
        1 atgactgaaa ctcaaaaaac tggattccca ctttcgtggg aatgacggga tgcaggttcg
       61 tgggaatgac gggatttgag gtttctgttt ttgattttct gttttcgtgg gaatgacggt
      121 ttagaagtta cccgaaacct caaaaaaacc gaaaccgaac ggatcggatt accgctttcg
      181 cgtttcaaag ttacggcgtt atcggaaaaa cagaaaatca aagctgcaag aatttattta
      241 aaacaaccga atttcaacgg atcggattct cgcctgtagg gaatgacggc ggaaggtttt
      301 ttgtcttttc tgacagatgt ccgcaatctg aaatcctgac cgtgggaacg ac
//
LOCUS       DBBZXU010000274          351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.274, whole genome shotgun sequence.
ACCESSION   DBBZXU010000274 DBBZXU010000000
VERSION     DBBZXU010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.274"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..341)
                     /locus_tag="ACJJDE_002180"
     CDS             complement(<1..341)
                     /locus_tag="ACJJDE_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002226556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542022.1"
                     /translation="MKIKPLQFSNNSRRFYVDKICVTEQDVNILASDRNYELNIEIFI
                     DNIIHFQITDESYKVKFSEYLFENKEKNDWDRNPAINYFFEIIDDSYMDWLKEESFDF
                     FEKKYYKAYIF"
BASE COUNT          122 a           53 c           33 g          143 t
ORIGIN      
        1 aagaaaatat aagccttata atatttcttt tcaaaaaaat caaaactttc ttctttcaac
       61 cagtccatat aactgtcatc tattatctcg aaaaaataat ttatagcagg atttctatcc
      121 caatcatttt tttctttatt ttcaaataaa tattctgaaa attttacttt ataagattca
      181 tctgttattt gaaaatgaat tatattgtca ataaatattt caatatttaa ttcataattt
      241 cggtcggatg ccaaaatgtt cacatcttgt tcggtaacac aaattttgtc tacgtaaaat
      301 ctgcgactat tgttagaaaa ttgtaatggt ttaatcttca ctatcgtttt c
//
LOCUS       DBBZXU010000275          351 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.275, whole genome shotgun sequence.
ACCESSION   DBBZXU010000275 DBBZXU010000000
VERSION     DBBZXU010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 351)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 351)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..351
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.275"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            44..241
                     /locus_tag="ACJJDE_002181"
     CDS             44..241
                     /locus_tag="ACJJDE_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542023.1"
                     /translation="MQKVYVVQSVSTGDFLYLSPETGDIGHTKLITNADYFYDFEEAI
                     NAGLEEIGNQYEFVVFGFLKD"
BASE COUNT          107 a           75 c           73 g           96 t
ORIGIN      
        1 ctgaaagtca tcggttttca actcgtgaag aaaggctgat tgaatgcaga aagtctatgt
       61 tgtccagtcc gtatcaacag gggactttct gtatctctct cctgaaacgg gcgacatcgg
      121 acataccaaa ttaatcacca atgccgatta tttctacgac ttcgaagaag cgattaacgc
      181 aggtttggaa gaaatcggca accaatacga atttgtcgta ttcggatttt tgaaagactg
      241 attttcggat gttcggcggt cgtctgaaaa acgctccatc cattaccgcc aaacactttt
      301 tgaaggaaaa tatcatgaaa tttattaaca cctgccgtaa atacggcgca a
//
LOCUS       DBBZXU010000276          343 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.276, whole genome shotgun sequence.
ACCESSION   DBBZXU010000276 DBBZXU010000000
VERSION     DBBZXU010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..343
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.276"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT          100 a           92 c           77 g           74 t
ORIGIN      
        1 tgcgcgggaa tgacaactca ttagttacct aaaacttaaa aagcagaaac ctttacgccg
       61 tcattcccac gaaagtggga atccgggaac ttaacgttac agtgatttat cggaaacggc
      121 tgaaaccgaa tgaattggat tcccgcctgc gcgggaatga cgaatccatc cgtacggaaa
      181 cctgcaccac gtcattccca cgaacctaca ttccgtcatt cccacgaaag tgggaatcca
      241 ggacgaaaaa tctccagaaa ccgttttacc cgataagttt ccgcaccgac aggtctggat
      301 tcccgcctgc gcgggaatga cgatgcaggt atttctgacg att
//
LOCUS       DBBZXU010000277          332 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.277, whole genome shotgun sequence.
ACCESSION   DBBZXU010000277 DBBZXU010000000
VERSION     DBBZXU010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..332
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.277"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           96 a           73 c           71 g           92 t
ORIGIN      
        1 tttttgaatt tcgggcaacg cttgaatctt cattccgcgc aggcggaaat tatcggtgcg
       61 gtacggcaac ttttttcgat atgaaaagac cgtcattcct gtaaaaacaa aaaatcaaaa
      121 acagaaaatt gaaattcgtc attcccgcgc aggcgggaat ctaggacgta aaatctatag
      181 tggattaaca aaaaccagta cagcgttgcc ttgacttagc tcgaagagaa cgattctcta
      241 aggtgctgaa gcaccgagtg agtcggttcc gcactatccg tactgtctgc ggcttcgtcg
      301 ctttctcctg atttttgtta atccactata aa
//
LOCUS       DBBZXU010000278          321 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.278, whole genome shotgun sequence.
ACCESSION   DBBZXU010000278 DBBZXU010000000
VERSION     DBBZXU010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 321)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 321)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..321
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.278"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..275
                     /locus_tag="ACJJDE_002182"
     CDS             <1..275
                     /locus_tag="ACJJDE_002182"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542024.1"
                     /translation="NPHHRHSRAGGNPKTQRNRNLSEKTETPPTVIPAKAGIQQHNAA
                     GIYRKKQKPPPTVIPAKAGIQQPKNHRNLSAKTETPTAVIPAKAGI"
BASE COUNT          119 a          103 c           59 g           40 t
ORIGIN      
        1 gaaaccctca ccaccgtcat tcccgcgcag gcgggaatcc aaaaacgcaa cgcaacagga
       61 atttatcaga aaaaacagaa accccaccga ccgtcattcc cgcaaaagcg ggaatccagc
      121 aacacaacgc agcaggaatt tatcggaaaa aacagaaacc cccaccgacc gtcattcccg
      181 caaaagcggg aatccagcaa ccgaaaaacc acaggaatct atcagcaaaa acagaaaccc
      241 ccaccgccgt cattcccgca aaagcgggaa tctagacccg tcggcacgga aacttaccga
      301 ataaaacagt ttccttagat t
//
LOCUS       DBBZXU010000279          314 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.279, whole genome shotgun sequence.
ACCESSION   DBBZXU010000279 DBBZXU010000000
VERSION     DBBZXU010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.279"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           82 a           76 c           78 g           78 t
ORIGIN      
        1 ctattaaaga ccgtcgggca tctgcagccg tcattcccgc gcaggcggga atccagtccg
       61 cttgttcggt aaatgagagg gcggattgcg cgcctgtcag ataaaccacg tgtttaaacg
      121 ggcggcaatg aggtacgcgc agagccttga agcgcagtcg atatattatt ttccaccaaa
      181 acggacgacc ccgcttgcct tgcaaacctt taaaaaggaa gccacccgga ttaatccgag
      241 tggccgtgga aaatcactta ccgcttgatt tatttaaaat ttatggtata atttgcctta
      301 gttagtagca cttg
//
LOCUS       DBBZXU010000280          312 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.280, whole genome shotgun sequence.
ACCESSION   DBBZXU010000280 DBBZXU010000000
VERSION     DBBZXU010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..312
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.280"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           89 a           69 c           81 g           73 t
ORIGIN      
        1 ttttggtttt ctgtccttgt gggaatgacg ggatgtaggt tcgtaggaat gacgtggtgc
       61 aggtttccgt atggatggat tcgtcgttcc cgcgaaagcg ggaatccgga accagaaacc
      121 acaaaaattt atcgggaaaa ccgaaactca aaaacaacgg aaaccgaacg gacaggattc
      181 ccgcctgcgc gggaatgacg gctcatacat cacccaaaaa attgaaacca aacagatggg
      241 attccctctt gcgtgaggct gacagatgcc gtctgaaaga ctttcagacg gcatagcttt
      301 ttctctttga at
//
LOCUS       DBBZXU010000281          300 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.281, whole genome shotgun sequence.
ACCESSION   DBBZXU010000281 DBBZXU010000000
VERSION     DBBZXU010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 300)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.281"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(30..>300)
                     /locus_tag="ACJJDE_002183"
     CDS             complement(30..>300)
                     /locus_tag="ACJJDE_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002216454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Imm41 family immunity protein"
                     /protein_id="HGG7542025.1"
                     /translation="LIEVRRKYPYPMDIPRDIVIGIGSIIDFLMVQNWKLFEIKASPW
                     LPKSVKINERYERFRVMLRYIFTDLDVEDWKFFYFPIQHSKGRLR"
BASE COUNT          105 a           60 c           34 g          101 t
ORIGIN      
        1 ataatgtatc tccaatataa ttaaactttt catctcaatc tacctttact atgttgtatt
       61 ggaaagtaaa aaaatttcca gtcctctaca tctagatcag taaaaatata acggagcatt
      121 actctgaacc tttcataacg ctcattaatt ttgacacttt taggcaacca aggggaagct
      181 ttaatttcaa aaagtttcca attttgaacc attaaaaaat caataatgct acctattcca
      241 atcacgatgt cccttggtat atccatcgga taaggatatt ttctcctaac ctcgattaaa
//
LOCUS       DBBZXU010000282          291 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.282, whole genome shotgun sequence.
ACCESSION   DBBZXU010000282 DBBZXU010000000
VERSION     DBBZXU010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 291)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 291)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..291
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.282"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>291
                     /locus_tag="ACJJDE_002184"
     CDS             <1..>291
                     /locus_tag="ACJJDE_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002215773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="replication initiation factor"
                     /protein_id="HGG7542026.1"
                     /translation="GGTETETAGRVQEVFECYETYITDGKGNLLGVPLRRGVSDSAFI
                     DQISFSFHEKTFFDKYGVRVSLLEDEDFIHAASMLAEEVFGFGLYKESKGSGG"
BASE COUNT           78 a           59 c           77 g           77 t
ORIGIN      
        1 ggggggtaca gaaaccgaaa cggcaggcag ggttcaggaa gtcttcgaat gttacgaaac
       61 gtacataacg gacggtaaag gaaacctgtt aggcgttcct cttcggcgcg gtgtatcaga
      121 ttcggctttc attgatcaaa ttagcttttc atttcatgaa aaaacctttt tcgataaata
      181 cggtgttaga gtcagtctgt tagaagatga agatttcatt cacgccgcgt ccatgctcgc
      241 cgaagaagtt ttcggtttcg gtctctacaa agagtccaaa ggctcgggcg g
//
LOCUS       DBBZXU010000283          286 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.283, whole genome shotgun sequence.
ACCESSION   DBBZXU010000283 DBBZXU010000000
VERSION     DBBZXU010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..286
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.283"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            complement(<1..>286)
                     /locus_tag="ACJJDE_002185"
     CDS             complement(<1..>286)
                     /locus_tag="ACJJDE_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002246820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542027.1"
                     /translation="KKDIFYCEQWSYGYKKLHKPFSEKQAEEKHLKGELYTAVIGSAT
                     QPEYVITLREEVGFFSVHFFDKFGRDYLTHQFQKYSNSNYYFLSMAVWRD"
BASE COUNT          101 a           57 c           37 g           91 t
ORIGIN      
        1 taatctctcc atacagccat agaaagaaaa taataattcg aattggaata tttttgaaat
       61 tgatgggtta aataatccct tccaaattta tcgaaaaaat gtaccgaaaa aaaacctact
      121 tcctctcgca aggtaattac atattcaggt tgtgtcgccg aacctattac ggcagtatat
      181 aactcccctt taagatgttt ttcctcagct tgtttctcag aaaaaggctt atgaagtttc
      241 ttataaccat aagaccactg ctcacaataa aaaatatctt tcttca
//
LOCUS       DBBZXU010000284          275 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.284, whole genome shotgun sequence.
ACCESSION   DBBZXU010000284 DBBZXU010000000
VERSION     DBBZXU010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..275
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.284"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           89 a           71 c           57 g           58 t
ORIGIN      
        1 aaataaagtg taatcccttt gatcataagg gaatgttgac aattagatcg attctcctag
       61 gctgactttc gcaataaatg gggttgtcaa taattgtgta tggtcgtttg ccgtccggcg
      121 gccgtcattc ccgcgaacgc aggaatccag caacacaatg cagcaggact ttatcggaaa
      181 aaaccgaaac cccaccgact gtcattcccg caaaagctgg aatccaaaaa cgcaacgcaa
      241 caggaattta tcggaaaaaa cagaaccccc ccacc
//
LOCUS       DBBZXU010000285          247 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.285, whole genome shotgun sequence.
ACCESSION   DBBZXU010000285 DBBZXU010000000
VERSION     DBBZXU010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 247)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 247)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..247
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.285"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
     gene            <1..>247
                     /locus_tag="ACJJDE_002186"
     CDS             <1..>247
                     /locus_tag="ACJJDE_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002225630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HGG7542028.1"
                     /translation="VLEGTEFKTTLAGADIQAGVGEKARVDAKIILKGIVNRIQSEEK
                     LETNSTVWQKQAGRGSTIETLKLPSFESPTPPKLSAPG"
BASE COUNT           75 a           71 c           61 g           40 t
ORIGIN      
        1 gtgctcgaag gtaccgaatt caaaaccacg ctggccggtg ccgacattca ggcaggtgta
       61 ggcgaaaaag cccgtgtcga tgcgaaaatt atcctcaaag gcattgtgaa ccgtatccag
      121 tcggaagaaa aattagaaac caactcaacc gtatggcaga aacaggccgg acgcggcagc
      181 actatcgaaa cgctaaaact gcccagcttc gaaagcccta ctccgcccaa attgtccgca
      241 cccggcg
//
LOCUS       DBBZXU010000286          235 bp    DNA     linear   BCT 20-NOV-2024
DEFINITION  TPA_asm: Neisseria meningitidis strain NZmenB isolate NMI9045
            SAMN35339244-rid24040843.denovo.286, whole genome shotgun sequence.
ACCESSION   DBBZXU010000286 DBBZXU010000000
VERSION     DBBZXU010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN35339244
            Sequence Read Archive: SRR30912816
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Neisseria meningitidis
  ORGANISM  Neisseria meningitidis
            Bacteria; Pseudomonadati; Pseudomonadota; Betaproteobacteria;
            Neisseriales; Neisseriaceae; Neisseria.
REFERENCE   1  (bases 1 to 235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (20-NOV-2024) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 20-NOV-2024
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002479106.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002479106.1
            Genome Coverage       :: 112x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 11/20/2024 22:27:13
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Annotation Software revision      :: 2024-07-18.build7555
            Genes (total)                     :: 2,186
            CDSs (total)                      :: 2,136
            Genes (coding)                    :: 2,013
            CDSs (with protein)               :: 2,013
            Genes (RNA)                       :: 50
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1, 1, 1 (5S, 16S, 23S)
            tRNAs                             :: 43
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 123
            CDSs (without protein)            :: 123
            Pseudo Genes (ambiguous residues) :: 0 of 123
            Pseudo Genes (frameshifted)       :: 47 of 123
            Pseudo Genes (incomplete)         :: 90 of 123
            Pseudo Genes (internal stop)      :: 18 of 123
            Pseudo Genes (multiple problems)  :: 28 of 123
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..235
                     /organism="Neisseria meningitidis"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN35339244-rid24040843.denovo.286"
                     /strain="NZmenB"
                     /isolate="NMI9045"
                     /host="Homo sapiens"
                     /db_xref="taxon:487"
                     /geo_loc_name="New Zealand"
                     /collection_date="1990"
                     /collected_by="Institute of Environmental Science and
                     Research"
                     /note="subgroup: B"
BASE COUNT           90 a           74 c           42 g           29 t
ORIGIN      
        1 aaaccgtcat tcccgcaaaa gcgggaatcc agccccccct aacgcaacag gaattcatcg
       61 aaaaaaccga aacctccaaa ccgtcattcc cacggaagtg ggaatccagt aatcgaaaaa
      121 ccacaggaat ctatcgaaaa aaaccccaac ccccaaaaaa accgggcgga taccgcacca
      181 tcctcccaaa ccctgattta tagcggatga acaaaaatca gggcaagacg gcgaa
//
